BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010807
(500 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255582522|ref|XP_002532046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528289|gb|EEF30336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 478
Score = 738 bits (1904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/493 (72%), Positives = 419/493 (84%), Gaps = 26/493 (5%)
Query: 5 NLSPYSLRLSTLSSSSASSSSSSSSSSFNQSSSQNYNFTHRHIPLSLRTRP-----RTGI 59
NLSP+SL+LS L SS+ ++ NF H P +L P +T I
Sbjct: 4 NLSPHSLQLSPLGSSNFTN-----------------NFPQIHNP-TLSWHPCKNLRQTHI 45
Query: 60 CCVWTRPRSKRGRKSEELESKELVRVLMRSFS-DKEPLVRTLNKYVKVVRSEHCFLLFEE 118
CV TRPR KR SEE E+++LVR ++RSFS DK PLVRTL+KYV+VVR+EHCFLLFEE
Sbjct: 46 TCVSTRPRKKRFPISEESETEDLVRYVLRSFSSDKVPLVRTLDKYVRVVRTEHCFLLFEE 105
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
LG+ DKWLQCLEVFRWMQKQRWYIAD+G+YSKLI+VMGKKGQTR+AMWLFSEMRNSGCRP
Sbjct: 106 LGRRDKWLQCLEVFRWMQKQRWYIADSGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRP 165
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
D SVYNALITAHLH++DKAKAL KALGYF+KMKGM+RC+PN+VTYNILLRA AQARNV+Q
Sbjct: 166 DSSVYNALITAHLHSKDKAKALIKALGYFEKMKGMQRCQPNVVTYNILLRAFAQARNVNQ 225
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
VNALFK+L +SI++PDIYTYNGVMDAYGKNGMI+EMESVLSRMKSNQCKPDIITFNLLID
Sbjct: 226 VNALFKDLDQSIVSPDIYTYNGVMDAYGKNGMIREMESVLSRMKSNQCKPDIITFNLLID 285
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
SYGK+Q FDKMEQVFKSL+HSKE+PTLPTFNSMI NYGKAR + AE V QKMT MKYTP
Sbjct: 286 SYGKKQDFDKMEQVFKSLLHSKERPTLPTFNSMITNYGKARQKENAESVLQKMTKMKYTP 345
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+FITYE +I MYG+CD+VS+AREIFD++ + GK++KVSTLNAML+ YC+NGLP EADLLF
Sbjct: 346 NFITYESLIMMYGFCDSVSKAREIFDDMIESGKEVKVSTLNAMLDVYCLNGLPMEADLLF 405
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS- 477
+N+ N+G+ PDS+TYKLLYKAYTKANMK+LVQKLLK M+++GI+PNKRFFL+AL F S
Sbjct: 406 DNARNVGLLPDSTTYKLLYKAYTKANMKKLVQKLLKHMDRDGIIPNKRFFLDALGAFKSL 465
Query: 478 -SLAGSQSGSAKT 489
+ +G+Q +AKT
Sbjct: 466 PASSGNQQNNAKT 478
>gi|225438599|ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic [Vitis vinifera]
gi|296082481|emb|CBI21486.3| unnamed protein product [Vitis vinifera]
Length = 489
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/478 (73%), Positives = 400/478 (83%), Gaps = 5/478 (1%)
Query: 24 SSSSSSSSFNQSSSQNYNFTHRHIPLSLRTRPRTGIC-CVWTRPRSKRGRKSEELESKEL 82
SSS+ S +F SS+ Y T H+P RP T + CV TRPR K G K ++ E +EL
Sbjct: 16 SSSTLSPTFTLPSSRFYKPTRLHLP----PRPSTTVVSCVSTRPRRKPGPKPDKSEVEEL 71
Query: 83 VRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYI 142
VRVLM++F + PL+ TLNKYVKV+R+EHCF LFEELGK+DKWLQCLEVFRWMQKQRWYI
Sbjct: 72 VRVLMKNFGGERPLISTLNKYVKVIRTEHCFRLFEELGKTDKWLQCLEVFRWMQKQRWYI 131
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
AD G+YSKLI+VMGKKGQTR+AMWLFSEMRNSGCRPD SVYNALITAHLH+RDK+KAL K
Sbjct: 132 ADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGCRPDTSVYNALITAHLHSRDKSKALIK 191
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
ALGYF KMKGMERCKPNIVTYNILLRA AQA+NV+Q NALFKEL+ESI++PDI+T+NGVM
Sbjct: 192 ALGYFDKMKGMERCKPNIVTYNILLRAFAQAQNVNQANALFKELNESIVSPDIFTFNGVM 251
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
DAYGKNGMIKEMESVLSRMKSNQCKPDIITFN+LIDSYG+RQ FDKMEQVFKSL+ SKEK
Sbjct: 252 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNVLIDSYGRRQEFDKMEQVFKSLLRSKEK 311
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
PTLPTFNSMI NYGKARL+ KAE VF+KMT M Y P+FITYE +I MYG+CD +SRAREI
Sbjct: 312 PTLPTFNSMITNYGKARLKEKAENVFKKMTDMGYAPNFITYESLIMMYGFCDCISRAREI 371
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
FDE+ K+MKVSTLNAMLE YCMNGLP EADLL E + P SSTYKLLYKAYTK
Sbjct: 372 FDEMMASKKEMKVSTLNAMLEVYCMNGLPMEADLLLERARKNRPFPGSSTYKLLYKAYTK 431
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTRSLSTAKS 500
A+ KEL++KLLK M+ +GI+PNKRFFLEAL F SS A +S + T LTR ++AK+
Sbjct: 432 ADQKELLEKLLKLMDSDGILPNKRFFLEALGAFGSSPASQESAGSTTGLTRPRNSAKT 489
>gi|224081220|ref|XP_002306340.1| predicted protein [Populus trichocarpa]
gi|222855789|gb|EEE93336.1| predicted protein [Populus trichocarpa]
Length = 416
Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/416 (75%), Positives = 375/416 (90%)
Query: 57 TGICCVWTRPRSKRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLF 116
T + CV TRP+ + E+ E++ELVRVL+RSFSDK+PLV+TLNKYVKV+R+EHCF+LF
Sbjct: 1 TQVSCVSTRPKKRPVPTDEKSEAQELVRVLVRSFSDKQPLVKTLNKYVKVMRTEHCFMLF 60
Query: 117 EELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGC 176
EELGK+DKWLQCLEVFRWMQKQRWY+AD G YSKLI+VMGKKGQTR+AMWLFSEMRNSGC
Sbjct: 61 EELGKTDKWLQCLEVFRWMQKQRWYVADNGCYSKLISVMGKKGQTRMAMWLFSEMRNSGC 120
Query: 177 RPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
RPD SVYNALITAHLH++DKAK+L KAL YF+KMK +ERC+PN+VTYNI+LRA AQARNV
Sbjct: 121 RPDTSVYNALITAHLHSKDKAKSLTKALAYFEKMKSIERCQPNVVTYNIILRAFAQARNV 180
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
+QVNALFK+L ESI++PDIYTYNGV+DAYGKNGMI+EMESVLSRMK +QCKPDIITFNLL
Sbjct: 181 NQVNALFKDLEESIVSPDIYTYNGVLDAYGKNGMIREMESVLSRMKIDQCKPDIITFNLL 240
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
IDSYGK+Q F+KMEQVFKSL+ SKEKPTLPTFNSMI+NYGKARL+ KAE VF+KM M+Y
Sbjct: 241 IDSYGKKQDFEKMEQVFKSLLRSKEKPTLPTFNSMIVNYGKARLKDKAESVFKKMADMRY 300
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
TPSFIT+E +I MYG CD VS+AR+IFD++ + GK++KVSTLNA+L YCMNGL EA +
Sbjct: 301 TPSFITFESLIMMYGICDCVSKARDIFDDMVESGKEVKVSTLNAVLNVYCMNGLHMEAHI 360
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
L EN+ ++GV P+SSTYKLLY+AYTKA MKELVQKLLK M+++GI+PNKRFF++AL
Sbjct: 361 LLENARSIGVPPNSSTYKLLYRAYTKAKMKELVQKLLKHMDKDGIIPNKRFFVDAL 416
>gi|356511125|ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Glycine max]
Length = 503
Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/437 (72%), Positives = 375/437 (85%), Gaps = 4/437 (0%)
Query: 55 PRTGICCVWTRPRSKRGRKSEELESKELVRVLMRSFS-DKEPLVRTLNKYVKVVRSEHCF 113
P + I C R KR + + E++ELVR+L S DKEPL++TLNKYVK VR++HCF
Sbjct: 21 PLSRISC---GARPKRKKSNHNSEAQELVRLLTSKISNDKEPLLKTLNKYVKQVRTQHCF 77
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
LLFEEL K D WLQCLEVFRWMQKQRWYIAD GIYSKLI+VMGKKGQTR+AMWLFSEMRN
Sbjct: 78 LLFEELAKHDNWLQCLEVFRWMQKQRWYIADNGIYSKLISVMGKKGQTRMAMWLFSEMRN 137
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
+GCRPD SVYNALITAHLH+RDK KALAKA+GYFQKMKGMERCKPNIVTYNILLRA AQA
Sbjct: 138 TGCRPDTSVYNALITAHLHSRDKTKALAKAIGYFQKMKGMERCKPNIVTYNILLRAFAQA 197
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
RNV+QVN+LFK+L ESI++PDIYT+NGVMDAYGKNGMI+EME+VL+RMKSNQCKPD+ITF
Sbjct: 198 RNVEQVNSLFKDLDESIVSPDIYTFNGVMDAYGKNGMIREMEAVLARMKSNQCKPDLITF 257
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
NLLIDSYGK+Q F KMEQVFKSL+ SKE+ +LPTFNSMI+NYGKARL+ KAE VF++MT
Sbjct: 258 NLLIDSYGKKQEFGKMEQVFKSLLRSKERASLPTFNSMILNYGKARLKDKAEDVFKRMTD 317
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
M YTPSF+T+E +I MYG+CD VSRA ++FDEL + +KVSTLNAML+ YC+NGLP E
Sbjct: 318 MGYTPSFVTHESLIYMYGFCDCVSRAAQLFDELVESKAHIKVSTLNAMLDVYCINGLPQE 377
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
AD LFE ++++ + PDSST+KLLYKAYTKAN KEL+ KLLK M+++GIVPNKRFFL+AL
Sbjct: 378 ADSLFERANSIKIYPDSSTFKLLYKAYTKANQKELLDKLLKHMDKDGIVPNKRFFLDALG 437
Query: 474 TFSSSLAGSQSGSAKTD 490
+S A S+S +A TD
Sbjct: 438 AVASLPANSESANAATD 454
>gi|356528509|ref|XP_003532845.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Glycine max]
Length = 580
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/442 (72%), Positives = 379/442 (85%), Gaps = 5/442 (1%)
Query: 52 RTRPRTGICCVWTRPRSKRGRKSEELESKELVRVL---MRSFSDKEPLVRTLNKYVKVVR 108
R P + I C RP K + + E++ELVR+L +RS +DKE L++TLNKYVK VR
Sbjct: 78 RAAPLSRISCGGPRP-PKSKKSNLNSEAQELVRLLTSKIRS-NDKEVLLKTLNKYVKQVR 135
Query: 109 SEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLF 168
++HCFLLFEELGK D WLQCLEVFRWMQKQRWYIAD GIYSKLI+VMGKKGQTR+AMWLF
Sbjct: 136 TQHCFLLFEELGKHDNWLQCLEVFRWMQKQRWYIADNGIYSKLISVMGKKGQTRMAMWLF 195
Query: 169 SEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLR 228
SEMRN+GCRPD SVYNALITAHL +RDK KALAKA+GYFQKMKGMERCKPNIVTYNILLR
Sbjct: 196 SEMRNTGCRPDTSVYNALITAHLRSRDKIKALAKAIGYFQKMKGMERCKPNIVTYNILLR 255
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
A AQARNV+QVN+LFK+L ESI++PDIYT+NGVMDAYGKNGMI+EME+VL+RMKSNQCKP
Sbjct: 256 AFAQARNVEQVNSLFKDLDESIVSPDIYTFNGVMDAYGKNGMIREMEAVLARMKSNQCKP 315
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
D+ITFNLLIDSYGK+QAF KMEQVFKSL+HSKE+P+LPTFNSMI+NYGKARL+ KAE VF
Sbjct: 316 DLITFNLLIDSYGKKQAFGKMEQVFKSLLHSKERPSLPTFNSMILNYGKARLKDKAEDVF 375
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
+KMT M YT SF+T+E +I MYG+CD VSRA ++FDEL + +KVSTLNAML+ YC+N
Sbjct: 376 KKMTDMGYTLSFVTHESMIYMYGFCDCVSRAAQLFDELVESKVHIKVSTLNAMLDVYCLN 435
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
GLP EAD LFE + ++ + PDSST+KLLYKAYTKAN KEL+ KLLK M+++GI+PNKRFF
Sbjct: 436 GLPQEADSLFERAISIKIHPDSSTFKLLYKAYTKANQKELLDKLLKHMDKDGIIPNKRFF 495
Query: 469 LEALETFSSSLAGSQSGSAKTD 490
L+AL +S A S+S +A TD
Sbjct: 496 LDALGAVASLPANSESANAATD 517
>gi|15235161|ref|NP_195672.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75266408|sp|Q9SV96.1|PP358_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g39620, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2453; Flags: Precursor
gi|5042178|emb|CAB44697.1| putative protein [Arabidopsis thaliana]
gi|7270946|emb|CAB80625.1| putative protein [Arabidopsis thaliana]
gi|58013022|gb|AAW62964.1| chloroplast embryo-defective 2453 [Arabidopsis thaliana]
gi|332661694|gb|AEE87094.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 563
Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/434 (73%), Positives = 363/434 (83%), Gaps = 1/434 (0%)
Query: 52 RTRPRTGICCVWTRPRSKRG-RKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSE 110
R RT I C R K R+S E E++ LVR LM SD+EPLV+TL+KYVKVVR +
Sbjct: 39 RRSTRTRITCGAISSRRKLAERESAERENRVLVRSLMSRISDREPLVKTLDKYVKVVRCD 98
Query: 111 HCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSE 170
HCFLLFEELGKSDKWLQCLEVFRWMQKQRWYI D G+YSKLI+VMGKKGQTR+AMWLFSE
Sbjct: 99 HCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSE 158
Query: 171 MRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRAC 230
M+NSGCRPD SVYNALITAHLHTRDKAKAL K GY KMKG+ERC+PN+VTYNILLRA
Sbjct: 159 MKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAF 218
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
AQ+ VDQVNALFK+L S ++PD+YT+NGVMDAYGKNGMIKEME+VL+RM+SN+CKPDI
Sbjct: 219 AQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDI 278
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
ITFN+LIDSYGK+Q F+KMEQ FKSLM SKEKPTLPTFNSMIINYGKAR+ KAE+VF+K
Sbjct: 279 ITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKK 338
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M M Y PSFITYEC+I MYGYC +VSRAREIF+E+ + + +K STLNAMLE YC NGL
Sbjct: 339 MNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGL 398
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
EAD LF N+ V PD+STYK LYKAYTKA+MKE VQ L+K+ME++GIVPNKRFFLE
Sbjct: 399 YIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLE 458
Query: 471 ALETFSSSLAGSQS 484
ALE F S L GS S
Sbjct: 459 ALEVFGSRLPGSGS 472
>gi|334187332|ref|NP_001190970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332661695|gb|AEE87095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 510
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/434 (73%), Positives = 363/434 (83%), Gaps = 1/434 (0%)
Query: 52 RTRPRTGICCVWTRPRSKRG-RKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSE 110
R RT I C R K R+S E E++ LVR LM SD+EPLV+TL+KYVKVVR +
Sbjct: 39 RRSTRTRITCGAISSRRKLAERESAERENRVLVRSLMSRISDREPLVKTLDKYVKVVRCD 98
Query: 111 HCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSE 170
HCFLLFEELGKSDKWLQCLEVFRWMQKQRWYI D G+YSKLI+VMGKKGQTR+AMWLFSE
Sbjct: 99 HCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSE 158
Query: 171 MRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRAC 230
M+NSGCRPD SVYNALITAHLHTRDKAKAL K GY KMKG+ERC+PN+VTYNILLRA
Sbjct: 159 MKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAF 218
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
AQ+ VDQVNALFK+L S ++PD+YT+NGVMDAYGKNGMIKEME+VL+RM+SN+CKPDI
Sbjct: 219 AQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDI 278
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
ITFN+LIDSYGK+Q F+KMEQ FKSLM SKEKPTLPTFNSMIINYGKAR+ KAE+VF+K
Sbjct: 279 ITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKK 338
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M M Y PSFITYEC+I MYGYC +VSRAREIF+E+ + + +K STLNAMLE YC NGL
Sbjct: 339 MNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGL 398
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
EAD LF N+ V PD+STYK LYKAYTKA+MKE VQ L+K+ME++GIVPNKRFFLE
Sbjct: 399 YIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLE 458
Query: 471 ALETFSSSLAGSQS 484
ALE F S L GS S
Sbjct: 459 ALEVFGSRLPGSGS 472
>gi|449451631|ref|XP_004143565.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Cucumis sativus]
Length = 528
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/449 (70%), Positives = 380/449 (84%), Gaps = 5/449 (1%)
Query: 47 IPLSLRTRPRTGICCVWTRPRSKRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKV 106
+P S++ T + C+ TRP K G K++ E++ELVR ++R+FSDKEPL++TL+KYV+V
Sbjct: 29 LPSSIKKAVSTRVVCISTRPSRKFGVKTDRSEAEELVRGIIRNFSDKEPLLKTLDKYVRV 88
Query: 107 VRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMW 166
+R+EHCFLLFEELGK DKWL+CLEVFRWMQKQRWYIAD G+YSKLI++MGKKGQ R+AMW
Sbjct: 89 MRTEHCFLLFEELGKRDKWLECLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMW 148
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
LFSEMRNSGCRPD SVYNALITAHLH++DKAKAL K L YF+KMKGMERCKPNIVTYNIL
Sbjct: 149 LFSEMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNIL 208
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
RA AQA VDQVN LFK+L ES+++ DIYTYNGVMDAYGKNG IKEME +L+RMKSNQ
Sbjct: 209 TRAFAQAAKVDQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQI 268
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
KPDII+FNLLIDSYGK+Q FDKMEQVFKSL+ SKE+PTLPTFNSMI NYGKARL+ KAE
Sbjct: 269 KPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEE 328
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
VF+KM M Y PS++T E +I MYG+CD VS+AREIFD + GK+++VSTLNAML+ YC
Sbjct: 329 VFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYC 388
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
+NGLP EADLLFE++ NM V PDS+TYKLLYKAYTKA+ KEL++KLLK M++ GI+PNKR
Sbjct: 389 INGLPLEADLLFESAGNMRVFPDSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKR 448
Query: 467 FFLEALETFSSSL-----AGSQSGSAKTD 490
FFL+AL T SS A +++GS +D
Sbjct: 449 FFLDALGTIGSSQEKPEPARTRTGSRNSD 477
>gi|449525698|ref|XP_004169853.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Cucumis sativus]
Length = 494
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/432 (72%), Positives = 372/432 (86%)
Query: 47 IPLSLRTRPRTGICCVWTRPRSKRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKV 106
+P S++ T + C+ TRP K G K++ E++ELVR ++R+FSDKEPL++TL+KYV+V
Sbjct: 29 LPSSIKKAVSTRVVCISTRPSRKFGVKTDRSEAEELVRGIIRNFSDKEPLLKTLDKYVRV 88
Query: 107 VRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMW 166
+R+EHCFLLFEELGK DKWL+CLEVFRWMQKQRWYIAD G+YSKLI++MGKKGQ R+AMW
Sbjct: 89 MRTEHCFLLFEELGKRDKWLECLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMW 148
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
LFSEMRNSGCRPD SVYNALITAHLH++DKAKAL K L YF+KMKGMERCKPNIVTYNIL
Sbjct: 149 LFSEMRNSGCRPDTSVYNALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNIL 208
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
RA AQA VDQVN LFK+L ES+++ DIYTYNGVMDAYGKNG IKEME +L+RMKSNQ
Sbjct: 209 TRAFAQAAKVDQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQI 268
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
KPDII+FNLLIDSYGK+Q FDKMEQVFKSL+ SKE+PTLPTFNSMI NYGKARL+ KAE
Sbjct: 269 KPDIISFNLLIDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEE 328
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
VF+KM M Y PS++T E +I MYG+CD VS+AREIFD + GK+++VSTLNAML+ YC
Sbjct: 329 VFRKMKDMGYDPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYC 388
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
+NGLP EADLLFE++ NM V PDS+TYKLLYKAYTKA+ KEL++KLLK M++ GI+PNKR
Sbjct: 389 INGLPLEADLLFESAGNMRVFPDSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKR 448
Query: 467 FFLEALETFSSS 478
FFL+AL T SS
Sbjct: 449 FFLDALGTIGSS 460
>gi|357519615|ref|XP_003630096.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524118|gb|AET04572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 635
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/456 (68%), Positives = 372/456 (81%), Gaps = 6/456 (1%)
Query: 40 YNFTHRHIP--LSLRTRPRTGICCVWTRPRSKRGRKSEELESKELVRVLMRSFSDKEPLV 97
Y F H P +++ TR I CV R R + +++ E++ELVR+L R SDKEPL+
Sbjct: 14 YPFPKIHYPPYITIPTR----ISCVSNPTRINRKQTTDQSETQELVRLLTRKISDKEPLL 69
Query: 98 RTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGK 157
+TLNKYVK+VR+EHCFLLFEELGK DKWLQCLEVFRWMQ+QRWYIAD G+YSKLI+VMGK
Sbjct: 70 KTLNKYVKLVRTEHCFLLFEELGKHDKWLQCLEVFRWMQRQRWYIADNGVYSKLISVMGK 129
Query: 158 KGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCK 217
KGQ RLAMWLFSEMRN+GCRPD SVYN+LI+AHLH+RDK+KAL KALGYF+KMK ERCK
Sbjct: 130 KGQIRLAMWLFSEMRNTGCRPDTSVYNSLISAHLHSRDKSKALVKALGYFEKMKTTERCK 189
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
PNIVTYNILLRA AQAR+V+QVN LFK+L ES ++PDIYT+NGVMD YGKNGMI+EMESV
Sbjct: 190 PNIVTYNILLRAFAQARDVNQVNYLFKDLDESSVSPDIYTFNGVMDGYGKNGMIREMESV 249
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L RMKSNQ K D+IT+NLLIDSYGK+Q FDKMEQVFKSL SKEKPTLPTFNSMI+NYGK
Sbjct: 250 LVRMKSNQVKLDLITYNLLIDSYGKKQQFDKMEQVFKSLSRSKEKPTLPTFNSMILNYGK 309
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
ARL+ KAE VFQ MT M YTPSF+T+E +I MYG C VS A E+FD+L + +KVST
Sbjct: 310 ARLKDKAENVFQNMTDMGYTPSFVTHESLIHMYGLCGCVSNAVELFDQLIESKVPIKVST 369
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
LNAML+ YC+NGL EAD LF + ++ + PD++TYKLLYKAYTKAN KEL+ KLLK+M+
Sbjct: 370 LNAMLDVYCINGLQQEADSLFTRAKSIKIFPDATTYKLLYKAYTKANSKELLDKLLKQMD 429
Query: 458 QNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTR 493
++ ++PNKRFFL+AL SS S S +A T +R
Sbjct: 430 KDSVIPNKRFFLDALGAIGSSTEKSGSANAGTGSSR 465
>gi|297797974|ref|XP_002866871.1| EMB2453 [Arabidopsis lyrata subsp. lyrata]
gi|297312707|gb|EFH43130.1| EMB2453 [Arabidopsis lyrata subsp. lyrata]
Length = 561
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/462 (67%), Positives = 367/462 (79%)
Query: 13 LSTLSSSSASSSSSSSSSSFNQSSSQNYNFTHRHIPLSLRTRPRTGICCVWTRPRSKRGR 72
+ L +S +S S SSF Q + + ++ ++ R+ IC + R R
Sbjct: 1 MDYLLTSPSSLRFSDFISSFPQETDHKWLRLSMNLGVTRRSTKTRIICGAISSRRKLAER 60
Query: 73 KSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVF 132
+S E E++ LVR LM SDKEPLV+TL+KYVKVVR +HCFLLFEELGKSDKWLQCLEVF
Sbjct: 61 ESAERENRVLVRSLMSRISDKEPLVKTLDKYVKVVRCDHCFLLFEELGKSDKWLQCLEVF 120
Query: 133 RWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH 192
RWMQKQRWYI D G+YSKLI+VMGKKGQTR+AMWLFSEM+NSGCRPD SVYNALITAHLH
Sbjct: 121 RWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLH 180
Query: 193 TRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILA 252
TRDKAKAL K GYF KMKGMERC+PN+VTYNILLRA AQ+ VDQVNALFK+L S ++
Sbjct: 181 TRDKAKALEKVRGYFDKMKGMERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVS 240
Query: 253 PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
PD+YT+NGVMDAYGKNGMIKEME+VL+RM+SN+CKPDIITFN+LIDSYGK+Q F+KMEQ
Sbjct: 241 PDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQT 300
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGY 372
FKSLM SKEKPTLPTFNSMIINYGKAR+ KAE+VF+KM M Y PSFITYEC+I MYGY
Sbjct: 301 FKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYMPSFITYECMIMMYGY 360
Query: 373 CDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
C +VSRAREIF+E+ + +K STLNAMLE YC NGL EAD LF N+ V PD+ST
Sbjct: 361 CGSVSRAREIFEEVVDSERVLKASTLNAMLEVYCRNGLYMEADKLFHNASAFRVHPDAST 420
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
YK LYKAYTKA+MKE VQ L+K+ME++GI + + + L+T
Sbjct: 421 YKFLYKAYTKADMKEHVQILMKKMEKDGIFSGQDYLVRILKT 462
>gi|326522967|dbj|BAJ88529.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 539
Score = 610 bits (1573), Expect = e-172, Method: Compositional matrix adjust.
Identities = 276/399 (69%), Positives = 335/399 (83%), Gaps = 1/399 (0%)
Query: 81 ELVRVLMR-SFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQR 139
ELVR +R + K+ LV L+++VKVVR+EHCFLLFEELG+ D W+QCLE+FRWMQKQR
Sbjct: 57 ELVRFFLRRTDGGKDRLVSVLDRHVKVVRTEHCFLLFEELGRRDGWVQCLEIFRWMQKQR 116
Query: 140 WYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKA 199
WY+AD GIYSKLI+VMG+KGQ R+AMWLFS+MRNSGC+PD SVYN+LI AHLH+RDK+KA
Sbjct: 117 WYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNSGCKPDTSVYNSLIGAHLHSRDKSKA 176
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L KALGYF KMKGMERC+PNIVTYNILLRACA+A + QV+ LFK+L ESI++PDIYTYN
Sbjct: 177 LVKALGYFDKMKGMERCQPNIVTYNILLRACARASDTKQVDILFKDLDESIVSPDIYTYN 236
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
GV+D YGKNGMI EMESVL RMKS QC+PD+ITFN+LIDSYG++Q FDKMEQVFKSL+ S
Sbjct: 237 GVIDGYGKNGMITEMESVLVRMKSKQCRPDVITFNILIDSYGRKQTFDKMEQVFKSLLRS 296
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
KE+PT PTFNSMI NYGKARL+ KAE V +KM + + P+++T EC+I MY YCD VS+A
Sbjct: 297 KERPTHPTFNSMITNYGKARLREKAESVIEKMQELGFKPNYVTQECLINMYAYCDCVSKA 356
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
++IFDEL + +S+LNAML+AYCMN LP EAD L + + GV P +STYKLLY+A
Sbjct: 357 QQIFDELVSSQSTVPLSSLNAMLDAYCMNRLPMEADRLLDTAIEKGVVPSASTYKLLYRA 416
Query: 440 YTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
YT+AN K LVQKLL+RM + GIVPNK+FFL+ALE F +S
Sbjct: 417 YTRANDKMLVQKLLQRMNKQGIVPNKKFFLDALEAFGTS 455
>gi|242065966|ref|XP_002454272.1| hypothetical protein SORBIDRAFT_04g027800 [Sorghum bicolor]
gi|241934103|gb|EES07248.1| hypothetical protein SORBIDRAFT_04g027800 [Sorghum bicolor]
Length = 519
Score = 606 bits (1563), Expect = e-171, Method: Compositional matrix adjust.
Identities = 281/405 (69%), Positives = 340/405 (83%), Gaps = 1/405 (0%)
Query: 75 EELESKELVR-VLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFR 133
E E+ ELVR VL R+ KE LV L+++V+ VR+EHCFLLFEELG+ D WLQCLEVFR
Sbjct: 52 EAAEAAELVRSVLRRTAGGKERLVPVLDRHVRGVRTEHCFLLFEELGRRDAWLQCLEVFR 111
Query: 134 WMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT 193
WMQKQRWY+AD GIYSKLI+VMG+KGQ R+AMWLFS+MRNSGC+PD SVYN+LI AHLH+
Sbjct: 112 WMQKQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNSGCKPDTSVYNSLIGAHLHS 171
Query: 194 RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP 253
RDK+KALAKALGYF+KMK + RC+P IVTYNILLRA AQA + QV+ LFK+L ES+++P
Sbjct: 172 RDKSKALAKALGYFEKMKCIARCQPTIVTYNILLRAFAQAGDTKQVDILFKDLDESVVSP 231
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
DIYTYNGV+DAYGKNGMIKEMESVL RMKS QC+PD+ITFN+LIDSYG++Q FDKMEQVF
Sbjct: 232 DIYTYNGVLDAYGKNGMIKEMESVLLRMKSKQCRPDVITFNILIDSYGRKQIFDKMEQVF 291
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
KSL+ SKE+PT PTFNSMI NYGKARL+ KAEYV +KM + Y P+++T EC+I MY +C
Sbjct: 292 KSLLRSKERPTHPTFNSMITNYGKARLREKAEYVVKKMEELGYKPNYVTQECLIMMYAHC 351
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
D VS+AR++FDEL +++S+LN+ML+AYCMNGL TEAD L + + V P+ STY
Sbjct: 352 DCVSKARQVFDELVSSQNKVQLSSLNSMLDAYCMNGLHTEADQLLDTALQKCVVPNGSTY 411
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
KLLYKAYT+AN K LVQKLLKRM + GIVPNK+FFL+ALE F +S
Sbjct: 412 KLLYKAYTRANDKVLVQKLLKRMNKQGIVPNKKFFLDALEAFGTS 456
>gi|357138098|ref|XP_003570635.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
chloroplastic-like [Brachypodium distachyon]
Length = 519
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 278/398 (69%), Positives = 332/398 (83%), Gaps = 1/398 (0%)
Query: 82 LVRVLMR-SFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRW 140
LVR +R + KE LV L+++VKVVR+EHCFLLFEELG+ D W+QCLE+FRWMQKQRW
Sbjct: 48 LVRFFLRKTAGGKERLVAVLDRHVKVVRTEHCFLLFEELGRHDGWVQCLEIFRWMQKQRW 107
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
Y+AD GIYSKLI+VMGKKGQ R+AMWLFS+MRNSGC+PD SVYN+LI AHLH+RDK+KAL
Sbjct: 108 YVADNGIYSKLISVMGKKGQIRMAMWLFSQMRNSGCKPDTSVYNSLIGAHLHSRDKSKAL 167
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
AKALGYF KMK +ERC+PNIVTYNILLRACA+A + QV LFK+L ES++ PDIYTYNG
Sbjct: 168 AKALGYFDKMKTIERCQPNIVTYNILLRACARASDAKQVEILFKDLDESLVTPDIYTYNG 227
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
V+D YGKNGMIKEMESVL RMKS QC+PD+ITFN+LIDSYG++Q FDKMEQVFKSL+ SK
Sbjct: 228 VIDGYGKNGMIKEMESVLVRMKSKQCRPDVITFNILIDSYGRKQIFDKMEQVFKSLLRSK 287
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
E+PT PTFNSMI NYGKARL+ KAE V +KM + + PS++T EC+I MY YCD VS+A+
Sbjct: 288 ERPTHPTFNSMITNYGKARLKEKAESVLEKMDELGFKPSYVTQECLIMMYAYCDCVSKAQ 347
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+IFDEL + +S+LNAML+AYCMN LP EAD L + + GV P +STYKLLYKAY
Sbjct: 348 QIFDELVNSQSTVPLSSLNAMLDAYCMNRLPMEADRLLDAAIEKGVVPGASTYKLLYKAY 407
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
T+AN K LVQKLL RM + GIVPNK+FFL+ALE F +S
Sbjct: 408 TRANDKVLVQKLLGRMNKQGIVPNKKFFLDALEAFGTS 445
>gi|125541147|gb|EAY87542.1| hypothetical protein OsI_08951 [Oryza sativa Indica Group]
Length = 482
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 285/413 (69%), Positives = 338/413 (81%), Gaps = 15/413 (3%)
Query: 81 ELVRVLMRSFSD-KEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLE--------- 130
+LVR +R S KE LV L+++VKVVR+EHCFLLFEELG+ D WLQCLE
Sbjct: 29 DLVRFFLRRTSGGKERLVAVLDRHVKVVRTEHCFLLFEELGRRDGWLQCLEGVDVDQQEM 88
Query: 131 -----VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
VFRWMQKQRWY+AD GIYSKLI+VMG+KGQ R+AMWLFS+MRNSGCRPD SVYN+
Sbjct: 89 NFEVPVFRWMQKQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNSGCRPDTSVYNS 148
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
LI AHLH+RDK+KALAKALGYF+KMK ++RC+PNIVTYNILLRA AQA + Q++ LFK+
Sbjct: 149 LIGAHLHSRDKSKALAKALGYFEKMKTIDRCQPNIVTYNILLRAFAQAGDTKQLDILFKD 208
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
L ES ++PDIYTYNGVMDAYGKNGMI EMESVL RMKSNQC+PD+ITFN+LIDSYG++QA
Sbjct: 209 LDESPVSPDIYTYNGVMDAYGKNGMITEMESVLVRMKSNQCRPDVITFNILIDSYGRKQA 268
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
FDKMEQVFKSL+ SKEKPT PTFNSMI NYGKARL+ KAE V KMT M + P+++T EC
Sbjct: 269 FDKMEQVFKSLLRSKEKPTHPTFNSMITNYGKARLREKAECVLDKMTEMGFKPNYVTQEC 328
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+I MY YCD VSRAR+IFDEL ++ +S++NAML+AYCMNGLP EAD L ++ G
Sbjct: 329 LIMMYAYCDCVSRARQIFDELVSSQNNVHLSSVNAMLDAYCMNGLPMEADQLLDSVIKKG 388
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
P +STYKLLYKAYTKAN K+L+QKLLKRM GIVPNK+FFL+ALE F ++
Sbjct: 389 AVPSASTYKLLYKAYTKANDKKLIQKLLKRMNSQGIVPNKKFFLDALEAFGNT 441
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/237 (18%), Positives = 100/237 (42%), Gaps = 9/237 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALA 201
D Y+ ++ GK G + M+++ CRPD +N LI ++ + DK + +
Sbjct: 217 DIYTYNGVMDAYGKNGMITEMESVLVRMKSNQCRPDVITFNILIDSYGRKQAFDKMEQVF 276
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
K+L ++ E KP T+N ++ +AR ++ + ++ E P+ T +
Sbjct: 277 KSL-----LRSKE--KPTHPTFNSMITNYGKARLREKAECVLDKMTEMGFKPNYVTQECL 329
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ Y + + + S+Q + + N ++D+Y + +Q+ S++
Sbjct: 330 IMMYAYCDCVSRARQIFDELVSSQNNVHLSSVNAMLDAYCMNGLPMEADQLLDSVIKKGA 389
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
P+ T+ + Y KA + + + ++M + P+ + + +G D R
Sbjct: 390 VPSASTYKLLYKAYTKANDKKLIQKLLKRMNSQGIVPNKKFFLDALEAFGNTDKKPR 446
>gi|125583699|gb|EAZ24630.1| hypothetical protein OsJ_08397 [Oryza sativa Japonica Group]
Length = 482
Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust.
Identities = 284/413 (68%), Positives = 337/413 (81%), Gaps = 15/413 (3%)
Query: 81 ELVRVLMRSFSD-KEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLE--------- 130
+LVR +R S KE LV L+++VKVVR+EHCFLLFEELG+ D WLQCLE
Sbjct: 29 DLVRFFLRRTSGGKERLVAVLDRHVKVVRTEHCFLLFEELGRRDGWLQCLEGVDVDQQEM 88
Query: 131 -----VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
VFRWMQKQRWY+AD GIYSKLI+VMG+KGQ R+AMWLFS+MRNSGCRPD SVYN+
Sbjct: 89 NFEVPVFRWMQKQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNSGCRPDTSVYNS 148
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
LI HLH+RDK+KALAKALGYF+KMK ++RC+PNIVTYNILLRA AQA + Q++ LFK+
Sbjct: 149 LIGTHLHSRDKSKALAKALGYFEKMKTIDRCQPNIVTYNILLRAFAQAGDTKQLDILFKD 208
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
L ES ++PDIYTYNGVMDAYGKNGMI EMESVL RMKSNQC+PD+ITFN+LIDSYG++QA
Sbjct: 209 LDESPVSPDIYTYNGVMDAYGKNGMITEMESVLVRMKSNQCRPDVITFNILIDSYGRKQA 268
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
FDKMEQVFKSL+ SKEKPT PTFNSMI NYGKARL+ KAE V KMT M + P+++T EC
Sbjct: 269 FDKMEQVFKSLLRSKEKPTHPTFNSMITNYGKARLREKAECVLDKMTEMGFKPNYVTQEC 328
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+I MY YCD VSRAR+IFDEL ++ +S++NAML+AYCMNGLP EAD L ++ G
Sbjct: 329 LIMMYAYCDCVSRARQIFDELVSSQNNVHLSSVNAMLDAYCMNGLPMEADQLLDSVIKKG 388
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
P +STYKLLYKAYTKAN K+L+QKLLKRM GIVPNK+FFL+ALE F ++
Sbjct: 389 AVPSASTYKLLYKAYTKANDKKLIQKLLKRMNSQGIVPNKKFFLDALEAFGNT 441
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/237 (18%), Positives = 100/237 (42%), Gaps = 9/237 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALA 201
D Y+ ++ GK G + M+++ CRPD +N LI ++ + DK + +
Sbjct: 217 DIYTYNGVMDAYGKNGMITEMESVLVRMKSNQCRPDVITFNILIDSYGRKQAFDKMEQVF 276
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
K+L ++ E KP T+N ++ +AR ++ + ++ E P+ T +
Sbjct: 277 KSL-----LRSKE--KPTHPTFNSMITNYGKARLREKAECVLDKMTEMGFKPNYVTQECL 329
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ Y + + + S+Q + + N ++D+Y + +Q+ S++
Sbjct: 330 IMMYAYCDCVSRARQIFDELVSSQNNVHLSSVNAMLDAYCMNGLPMEADQLLDSVIKKGA 389
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
P+ T+ + Y KA + + + ++M + P+ + + +G D R
Sbjct: 390 VPSASTYKLLYKAYTKANDKKLIQKLLKRMNSQGIVPNKKFFLDALEAFGNTDKKPR 446
>gi|162460162|ref|NP_001106062.1| pentatricopeptide repeat 5 [Zea mays]
gi|154520281|gb|ABS82814.1| pentatricopeptide repeat protein 5 [Zea mays]
gi|413924537|gb|AFW64469.1| pentatricopeptide repeat 5 [Zea mays]
Length = 499
Score = 603 bits (1554), Expect = e-170, Method: Compositional matrix adjust.
Identities = 285/435 (65%), Positives = 350/435 (80%), Gaps = 7/435 (1%)
Query: 45 RHIPLSLRTRPRTGICCVWTRPRSKRGRKSEELESKELVRVLMR-SFSDKEPLVRTLNKY 103
RH+ L+ R++ R P + G E+ ELVR L+R + KE LV L+++
Sbjct: 29 RHVALAARSKRRGA------GPAAAEGVDEAAAEAAELVRSLLRRTAGGKERLVPVLDRH 82
Query: 104 VKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRL 163
V+VVR+EHCFLLFEELG+ D WLQCL+VFRWMQKQRWY+AD GIYSKLI+VMG+KGQ R+
Sbjct: 83 VRVVRTEHCFLLFEELGRRDAWLQCLDVFRWMQKQRWYVADNGIYSKLISVMGRKGQIRM 142
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
AMWLFS+MRNSGC+PD SVYN+LI AHLH+RDK KALAKALGYF+KMK +ERC+P IVTY
Sbjct: 143 AMWLFSQMRNSGCKPDTSVYNSLIGAHLHSRDKTKALAKALGYFEKMKCIERCQPTIVTY 202
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
NILLRA AQA + QV+ LFK+L ES+++PD+YTYNGV+DAYGKNGMIKEMESVL RMKS
Sbjct: 203 NILLRAFAQAGDTKQVDMLFKDLDESVVSPDVYTYNGVLDAYGKNGMIKEMESVLVRMKS 262
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
QC+PD+ITFN+LIDSYG++Q FDKMEQVFKSL+ SKE+PT PTFNSMI NYG+ARL+ K
Sbjct: 263 TQCRPDVITFNILIDSYGRKQTFDKMEQVFKSLLRSKERPTHPTFNSMITNYGRARLREK 322
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
AE V +KM + + P+++T EC+I MY +CD VS+AR++FDEL + +S+LN+MLE
Sbjct: 323 AESVVEKMEELGFKPNYVTQECLIIMYAHCDCVSKARQVFDELVTSQTKVHLSSLNSMLE 382
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
AYCMNGL TEAD L + + V P+ STYKLLYKAYTKAN K LVQKLLKRM + GIVP
Sbjct: 383 AYCMNGLHTEADRLLDTALQQCVVPNGSTYKLLYKAYTKANDKLLVQKLLKRMNKQGIVP 442
Query: 464 NKRFFLEALETFSSS 478
NK+FFL+ALE F +S
Sbjct: 443 NKKFFLDALEAFGTS 457
>gi|223946379|gb|ACN27273.1| unknown [Zea mays]
gi|413924536|gb|AFW64468.1| pentatricopeptide repeat 5 [Zea mays]
Length = 386
Score = 526 bits (1356), Expect = e-147, Method: Compositional matrix adjust.
Identities = 241/344 (70%), Positives = 291/344 (84%)
Query: 135 MQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR 194
MQKQRWY+AD GIYSKLI+VMG+KGQ R+AMWLFS+MRNSGC+PD SVYN+LI AHLH+R
Sbjct: 1 MQKQRWYVADNGIYSKLISVMGRKGQIRMAMWLFSQMRNSGCKPDTSVYNSLIGAHLHSR 60
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
DK KALAKALGYF+KMK +ERC+P IVTYNILLRA AQA + QV+ LFK+L ES+++PD
Sbjct: 61 DKTKALAKALGYFEKMKCIERCQPTIVTYNILLRAFAQAGDTKQVDMLFKDLDESVVSPD 120
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
+YTYNGV+DAYGKNGMIKEMESVL RMKS QC+PD+ITFN+LIDSYG++Q FDKMEQVFK
Sbjct: 121 VYTYNGVLDAYGKNGMIKEMESVLVRMKSTQCRPDVITFNILIDSYGRKQTFDKMEQVFK 180
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
SL+ SKE+PT PTFNSMI NYG+ARL+ KAE V +KM + + P+++T EC+I MY +CD
Sbjct: 181 SLLRSKERPTHPTFNSMITNYGRARLREKAESVVEKMEELGFKPNYVTQECLIIMYAHCD 240
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
VS+AR++FDEL + +S+LN+MLEAYCMNGL TEAD L + + V P+ STYK
Sbjct: 241 CVSKARQVFDELVTSQTKVHLSSLNSMLEAYCMNGLHTEADRLLDTALQQCVVPNGSTYK 300
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
LLYKAYTKAN K LVQKLLKRM + GIVPNK+FFL+ALE F +S
Sbjct: 301 LLYKAYTKANDKLLVQKLLKRMNKQGIVPNKKFFLDALEAFGTS 344
>gi|168045822|ref|XP_001775375.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673320|gb|EDQ59845.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 406
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 163/378 (43%), Positives = 224/378 (59%), Gaps = 6/378 (1%)
Query: 107 VRSEHCFLLFEELGKSDKWLQCLEV-FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAM 165
+R F L LGK KW LEV FRWMQ+Q+WY D G +SKLI MGK Q R+A+
Sbjct: 1 MRQADWFALLAALGKQSKWTLILEVTFRWMQEQKWYRLDNGFHSKLIVTMGKAKQLRMAV 60
Query: 166 WLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNI 225
W F E++ +G RPD S+YNALITAHL DK AKAL F++MK CKP++VTYNI
Sbjct: 61 WFFKEVKRNGHRPDTSLYNALITAHLQAEDKRIGFAKALQLFEEMKTKANCKPDLVTYNI 120
Query: 226 LLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS-N 284
LLR AQ R++ QV F+E+ + P++ +YNGV+ AYGK G + +ME L M+
Sbjct: 121 LLRGSAQVRDILQVERFFEEMEVEKIHPNLISYNGVIGAYGKAGDLVQMEKTLFTMRILK 180
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK----PTLPTFNSMIINYGKARL 340
KPD +T N LI+SYG + F KMEQVFKS+ +K K P T+N ++ +Y +
Sbjct: 181 HIKPDTVTSNTLIESYGYGRDFVKMEQVFKSMTAAKNKQTSRPDAKTYNILMASYARLGE 240
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
GK E+ +M A + + +YE ++T YG ++ E F ++ + G + STLNA
Sbjct: 241 VGKMEWSCSRMEAANFKLNLRSYEILMTGYGEVGAIASMSECFYQMLQAGMQPQKSTLNA 300
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
ML AYC + EA+ L ++ P +S+Y +L +AY K V+ L +RM + G
Sbjct: 301 MLRAYCKHNCFEEAEELLNDALGWQTRPRTSSYLILLRAYAKERRSSDVEMLTERMAKVG 360
Query: 461 IVPNKRFFLEALETFSSS 478
I P FLEALE+FS S
Sbjct: 361 IAPCAATFLEALESFSLS 378
>gi|302822123|ref|XP_002992721.1| hypothetical protein SELMODRAFT_135826 [Selaginella moellendorffii]
gi|300139462|gb|EFJ06202.1| hypothetical protein SELMODRAFT_135826 [Selaginella moellendorffii]
Length = 449
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 148/385 (38%), Positives = 237/385 (61%), Gaps = 7/385 (1%)
Query: 99 TLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI---YSKLIAVM 155
L+KY + + + L +E+G+ + W L +F+W+QK +++ + ++K+I M
Sbjct: 47 VLDKYARHIPVDGFMALVDEIGRLNDWALALALFKWLQKNEARLSNRDLEVAHAKIIDTM 106
Query: 156 GKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER 215
GK+GQ RLA W+FS+++ S R P V+NA+I AHL ++ A+AL AL +F MK
Sbjct: 107 GKQGQLRLASWIFSQLQLS-SRTTP-VFNAIIMAHLRCKNVARALDSALDHFGHMKTSVH 164
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKEL-HESILAPDIYTYNGVMDAYGKNGMIKEM 274
P++ TYN+L RACAQA D+ ALF EL L PD YT+NG+MDAY K G+ ++M
Sbjct: 165 SCPSLATYNMLTRACAQAGLTDKAEALFLELLRRDDLKPDAYTFNGIMDAYAKKGLYRDM 224
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH-SKEKPTLPTFNSMII 333
E L M + +PD++TFN+LID+YG+ F KME+ +KSL++ S KP+ TFNSM+
Sbjct: 225 EYKLKEMSEHGVRPDLVTFNVLIDAYGRAGDFVKMERTYKSLVNLSGCKPSATTFNSMLA 284
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
+YG++R GK E V +M P T+ +++ YG + R+ FD++ +
Sbjct: 285 SYGQSRELGKMEQVLVRMDMAGLGPDLTTFNTLMSSYGRAGELDTMRKCFDKMVRSPVKP 344
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
+VSTL+ +L AY +GL EA+ LF N+ + + P S+Y +L+KAY + + + L+
Sbjct: 345 QVSTLDVLLRAYAEHGLVDEAEALFINASKLDIKPAVSSYLILFKAYGEERQLDKMTVLM 404
Query: 454 KRMEQNGIVPNKRFFLEALETFSSS 478
+MEQ+G+ + F L+ALE+++++
Sbjct: 405 SKMEQSGVESGQEFLLQALESYAAT 429
>gi|302823876|ref|XP_002993586.1| hypothetical protein SELMODRAFT_137265 [Selaginella moellendorffii]
gi|300138598|gb|EFJ05361.1| hypothetical protein SELMODRAFT_137265 [Selaginella moellendorffii]
Length = 451
Score = 284 bits (727), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 151/402 (37%), Positives = 242/402 (60%), Gaps = 7/402 (1%)
Query: 82 LVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWY 141
++R+L K L+KY + + + L +E+G+ + W L +F+W+QK
Sbjct: 32 VMRILHELQDKKSSKSHVLDKYARHIPVDGFMALVDEIGRLNDWALALALFKWLQKNEAR 91
Query: 142 IADTGI---YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
+++ + ++K+I MGK+GQ RLA W+FS+++ S R P V NA+I AHL ++ A+
Sbjct: 92 LSNRDLEVAHAKIIDTMGKQGQLRLASWIFSQLQLS-SRTTP-VLNAIIMAHLRCKNVAR 149
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL-HESILAPDIYT 257
AL AL +F MK P++ TYN+L RACAQA D+ ALF EL L PD YT
Sbjct: 150 ALDSALDHFGHMKTSVHSCPSLATYNMLTRACAQAGLTDKAEALFLELLRREDLKPDAYT 209
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
+NG+MDAY K G+ ++ME L M + +PD++TFN+LID+YG+ F KME+ +KSL+
Sbjct: 210 FNGIMDAYAKKGLYRDMEYKLKEMSEHGVRPDLVTFNVLIDAYGRAGDFVKMERTYKSLV 269
Query: 318 H-SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+ S KP+ TFNSM+ +YG++R GK E V +M P T+ +++ YG +
Sbjct: 270 NLSGCKPSATTFNSMLASYGQSRELGKMEQVLVRMDMAGLGPDLTTFNTLMSSYGRAGEL 329
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
R+ FD++ + +VSTL+ +L AY +GL EA+ LF N+ + + P S+Y +L
Sbjct: 330 DTMRKCFDKMVRSPVKPQVSTLDVLLRAYAEHGLVDEAEALFINASKLDIKPAVSSYLIL 389
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+KAY + + + L+ +MEQ+G+ + F L+ALE+++++
Sbjct: 390 FKAYGEERQLDKMTVLMSKMEQSGVESGQEFLLQALESYAAT 431
>gi|168012907|ref|XP_001759143.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689842|gb|EDQ76212.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 148/371 (39%), Positives = 222/371 (59%), Gaps = 10/371 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L E L KW LEVFRWMQ+Q+WY D G Y+KLI + GK R+A+WLF+E++ S
Sbjct: 84 LLEGLANQSKWALTLEVFRWMQRQKWYNHDDGFYAKLIVISGKARDLRMAVWLFNEVKRS 143
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G RPD S+YNALITA+LH+RDK + A+ F+KMK +C+PN+VTYNILLRA AQ
Sbjct: 144 GSRPDSSLYNALITAYLHSRDKGRGFEAAMKLFEKMKQKPKCQPNLVTYNILLRASAQLG 203
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK-SNQCKPDIITF 293
+V QV+ FKE+ + + PD+ TYNGV+ AY + G +ME L M+ KPD +T
Sbjct: 204 DVVQVDRFFKEMEAAKIYPDLVTYNGVIGAYAEAGDYVQMEMTLFVMRIQKHIKPDNVTS 263
Query: 294 NLLIDSYGKRQAFDKMEQ-------VFKSLMHSKEK--PTLPTFNSMIINYGKARLQGKA 344
N LI +YG+ + F KMEQ V KS+ SK K P L T+N ++ +Y +A+
Sbjct: 264 NTLIGAYGRGKDFVKMEQVVSLFTAVLKSMTGSKSKHRPDLKTYNLLMSSYARAQDMENM 323
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
+ F +M + P+F ++E ++ +G + + RE F ++ + + STLN M+ A
Sbjct: 324 LWSFSRMEEASFKPNFRSFEILMYGFGGVGDFEKMRECFHQMLEASIKPQTSTLNTMISA 383
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
YC + EA+ L + + + P +S+Y ++ +AY + N +++L++RM + P
Sbjct: 384 YCKHNFFEEAEELLKEALEWQIHPRTSSYLIILRAYARDNRLNDMERLIERMRIADVAPV 443
Query: 465 KRFFLEALETF 475
FL++LE F
Sbjct: 444 SASFLKSLEHF 454
>gi|115448703|ref|NP_001048131.1| Os02g0750400 [Oryza sativa Japonica Group]
gi|46390206|dbj|BAD15637.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537662|dbj|BAF10045.1| Os02g0750400 [Oryza sativa Japonica Group]
Length = 211
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 111/170 (65%), Positives = 134/170 (78%)
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
MEQVFKSL+ SKEKPT PTFNSMI NYGKARL+ KAE V KMT M + P+++T EC+I
Sbjct: 1 MEQVFKSLLRSKEKPTHPTFNSMITNYGKARLREKAECVLDKMTEMGFKPNYVTQECLIM 60
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
MY YCD VSRAR+IFDEL ++ +S++NAML+AYCMNGLP EAD L ++ G P
Sbjct: 61 MYAYCDCVSRARQIFDELVSSQNNVHLSSVNAMLDAYCMNGLPMEADQLLDSVIKKGAVP 120
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+STYKLLYKAYTKAN K+L+QKLLKRM GIVPNK+FFL+ALE F ++
Sbjct: 121 SASTYKLLYKAYTKANDKKLIQKLLKRMNSQGIVPNKKFFLDALEAFGNT 170
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 66/149 (44%)
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
+FK L S P T+N ++ YGK + ++ E VL +M KP+ +T LI Y
Sbjct: 4 VFKSLLRSKEKPTHPTFNSMITNYGKARLREKAECVLDKMTEMGFKPNYVTQECLIMMYA 63
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
+ Q+F L+ S+ L + N+M+ Y L +A+ + + PS
Sbjct: 64 YCDCVSRARQIFDELVSSQNNVHLSSVNAMLDAYCMNGLPMEADQLLDSVIKKGAVPSAS 123
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLG 390
TY+ + Y ++ +++ ++ G
Sbjct: 124 TYKLLYKAYTKANDKKLIQKLLKRMNSQG 152
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 5/136 (3%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
+F + S +P +N++IT + KA+ KA KM M KPN VT L
Sbjct: 4 VFKSLLRSKEKPTHPTFNSMITNY----GKARLREKAECVLDKMTEM-GFKPNYVTQECL 58
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+ A V + +F EL S + + N ++DAY NG+ E + +L +
Sbjct: 59 IMMYAYCDCVSRARQIFDELVSSQNNVHLSSVNAMLDAYCMNGLPMEADQLLDSVIKKGA 118
Query: 287 KPDIITFNLLIDSYGK 302
P T+ LL +Y K
Sbjct: 119 VPSASTYKLLYKAYTK 134
>gi|449436321|ref|XP_004135941.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
gi|449514880|ref|XP_004164505.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
Length = 477
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 181/354 (51%), Gaps = 5/354 (1%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
+E + + W L++F +++Q+WY Y+KL+ ++GK Q A LF M + G
Sbjct: 98 LDEAIQENLWETALKIFGLLRQQQWYEPRCQTYTKLLMLLGKCKQPEQASLLFEIMFSEG 157
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
+P VY AL++A+ ++ L KA+ +MK + CKP++ TY+IL+ C + R
Sbjct: 158 LKPSIDVYTALVSAY----GQSGLLHKAISTVDEMKSISDCKPDVHTYSILIDCCTRLRR 213
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFN 294
D + + ++ + + TYN +++ +GK M ++MES+L M +S+ C PD+ITFN
Sbjct: 214 FDLLKKILADMSCLGITCNTVTYNTIINGFGKAKMFEQMESLLLEMIESDSCPPDLITFN 273
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
I +YG + +KME+ +K +P + T+NSMI +YGKA + K + V M
Sbjct: 274 TFIRAYGNSEQIEKMEKWYKEFQLMGIEPDIWTYNSMISSYGKAGMYDKMKSVLNFMEKR 333
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
++P+ +T II +G N+ E F + G T +++ AY +G +
Sbjct: 334 FFSPTIVTMNTIIDSFGRAGNIEEMEEYFKNMKFQGMKPNSVTYCSLVNAYGKSGDLEKV 393
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
D + N V PD+ + L Y +A + +L M++N VP+ F
Sbjct: 394 DSILRQIENSDVVPDTPLFNCLINVYGQAGNVRKMGELFLEMKENKCVPDGITF 447
>gi|255556562|ref|XP_002519315.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541630|gb|EEF43179.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 491
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 176/344 (51%), Gaps = 9/344 (2%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W Q LEVF +++Q +Y G Y KL+ ++G+ GQ + A LF EM G P +Y
Sbjct: 109 QWFQALEVFEMLKEQPFYHPKEGTYMKLLVLLGRTGQPQRAHQLFDEMVEEGIEPTAELY 168
Query: 184 NALITAHL--HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
AL+ A+ H D+A ++ Q+MK + RC P++ TY+ LL+AC A + V A
Sbjct: 169 TALLAAYCRNHLTDEAFSI------LQQMKTLPRCLPDVYTYSTLLKACVDASRFELVEA 222
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSY 300
L++E+ E ++ P+ T N V+ YGK GM +ME VLS M +S +CKPD+ T N+++ +
Sbjct: 223 LYQEMGERLITPNTVTQNIVLSGYGKAGMYDQMERVLSGMLESTECKPDVWTMNIILSVF 282
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
G + D ME+ ++ +P TFN +I YGK R+ K V + M +++ +
Sbjct: 283 GNKGQIDLMEKWYEKFRSFGIEPETRTFNILIGAYGKKRMYDKMSSVMEFMRKLQFPWTT 342
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
TY +I + +V FD++ G T ++ Y GL + +
Sbjct: 343 STYNNVIEAFAVAGDVKHMEYTFDQMRAEGMKADTKTFCCLINGYANAGLFHKVISSVQL 402
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ + +++ Y + A KA ++++ KRM+ N P+
Sbjct: 403 ATKFEIPENTTFYNAIISACAKAEDLMEMERVFKRMKDNQCQPD 446
>gi|224104097|ref|XP_002313317.1| predicted protein [Populus trichocarpa]
gi|222849725|gb|EEE87272.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 177/358 (49%), Gaps = 5/358 (1%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
K ++W L++F ++KQ WY T Y+KL+ ++GK Q +LF M + G +P
Sbjct: 91 KENQWESALKIFELLRKQHWYEPRTKTYTKLLMMLGKCRQPEEGSFLFEVMLSDGLKPTI 150
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
VY AL++A+ K+ L KA +MK + CKP++ TY+IL+ C + + +
Sbjct: 151 DVYTALVSAY----GKSGQLDKAFSIVVEMKAISECKPDVYTYSILINCCIKLHRFELIR 206
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDS 299
+ E+ + TYN ++D YGK M +EME+ L+ M +S PD+ TFN +I +
Sbjct: 207 GILAEMSYLGIECSTVTYNTIIDGYGKAKMFEEMENTLTDMIESGSSVPDLFTFNSIIGA 266
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
YG + DKME+ + + + TFN +I +YGKA + GK V + M ++PS
Sbjct: 267 YGSKGRIDKMEKWYTEFQLMGLRQDIKTFNILIRSYGKAGMYGKMRSVLEFMEKRFFSPS 326
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
+T+ I +G ++ E F ++ LG T +++ AY G + D +
Sbjct: 327 IVTHNIFIETFGKAGDIETMEEYFSKMKHLGIKPNTVTYCSLVSAYSKAGHIMKVDSILR 386
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
N V D+ + + AY +A E + +L ME P+ F ++ +++
Sbjct: 387 QVENSDVILDTPFFNCVISAYGRAGDIEKMSELFLGMEGRKCKPDSITFATMIQAYNA 444
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 131/278 (47%), Gaps = 2/278 (0%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
AL F+ ++ +P TY LL + R ++ + LF+ + L P I Y ++
Sbjct: 98 ALKIFELLRKQHWYEPRTKTYTKLLMMLGKCRQPEEGSFLFEVMLSDGLKPTIDVYTALV 157
Query: 263 DAYGKNGMIKEMESVLSRMKS-NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
AYGK+G + + S++ MK+ ++CKPD+ T+++LI+ K F+ + + + +
Sbjct: 158 SAYGKSGQLDKAFSIVVEMKAISECKPDVYTYSILINCCIKLHRFELIRGILAEMSYLGI 217
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMT-AMKYTPSFITYECIITMYGYCDNVSRAR 380
+ + T+N++I YGKA++ + E M + P T+ II YG + +
Sbjct: 218 ECSTVTYNTIIDGYGKAKMFEEMENTLTDMIESGSSVPDLFTFNSIIGAYGSKGRIDKME 277
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ + E +G + T N ++ +Y G+ + + E +P T+ + + +
Sbjct: 278 KWYTEFQLMGLRQDIKTFNILIRSYGKAGMYGKMRSVLEFMEKRFFSPSIVTHNIFIETF 337
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
KA E +++ +M+ GI PN + + +S +
Sbjct: 338 GKAGDIETMEEYFSKMKHLGIKPNTVTYCSLVSAYSKA 375
>gi|356527376|ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Glycine max]
Length = 515
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 184/354 (51%), Gaps = 5/354 (1%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W L+VF + +Q WY DTG+Y KLI ++GK Q A LF M + GC D Y
Sbjct: 136 RWESALKVFELLHEQIWYKPDTGVYIKLIVMLGKCKQPEKAHELFQAMVDEGCVLDCESY 195
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
AL++A+ ++ L KA ++MK C+P++ TY+ILL++C Q D++ +L
Sbjct: 196 TALLSAY----SRSGLLDKAFSLLEEMKNTPGCQPDVQTYSILLKSCLQVFAFDKIQSLL 251
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ-CKPDIITFNLLIDSYGK 302
++ + P+ TYN ++DAYGK EMES+L M +++ C+PD+ T N + ++G
Sbjct: 252 SDMTNRGIKPNTVTYNTLIDAYGKARKFSEMESILVEMLADRYCQPDVWTMNSTLRAFGN 311
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ ME+ ++ ++ +P + TFN ++ +YGKA+ K V + M Y+ + +T
Sbjct: 312 IGQIETMEKCYEKFQNAGIQPNVQTFNILLDSYGKAQDYKKMSAVMEYMQKYHYSWTIVT 371
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
+ +I +G ++ + +F + TL +++ AY G P + +
Sbjct: 372 FNIVIDAFGKAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKISGVLRFVE 431
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
N V D+ + L AY + ++ +L+ M+QNG P+ + ++T++
Sbjct: 432 NSDVLLDTVFFNCLVDAYARLGCLAEMKGVLEMMKQNGCKPDIVTYRTMIKTYT 485
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 137/315 (43%), Gaps = 37/315 (11%)
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
LH R A AL F+ + KP+ Y L+ + + ++ + LF+ + +
Sbjct: 128 LHERVTALRWESALKVFELLHEQIWYKPDTGVYIKLIVMLGKCKQPEKAHELFQAMVDEG 187
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ-CKPDIITFNLLIDSYGKRQAFDKM 309
D +Y ++ AY ++G++ + S+L MK+ C+PD+ T+++L+ S + AFDK+
Sbjct: 188 CVLDCESYTALLSAYSRSGLLDKAFSLLEEMKNTPGCQPDVQTYSILLKSCLQVFAFDKI 247
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT------------ 357
+ + + + KP T+N++I YGKAR + E + +M A +Y
Sbjct: 248 QSLLSDMTNRGIKPNTVTYNTLIDAYGKARKFSEMESILVEMLADRYCQPDVWTMNSTLR 307
Query: 358 ------------------------PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
P+ T+ ++ YG + + + + + K
Sbjct: 308 AFGNIGQIETMEKCYEKFQNAGIQPNVQTFNILLDSYGKAQDYKKMSAVMEYMQKYHYSW 367
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
+ T N +++A+ G + + LF + + P T L +AY +A E + +L
Sbjct: 368 TIVTFNIVIDAFGKAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKISGVL 427
Query: 454 KRMEQNGIVPNKRFF 468
+ +E + ++ + FF
Sbjct: 428 RFVENSDVLLDTVFF 442
>gi|297736301|emb|CBI24939.3| unnamed protein product [Vitis vinifera]
Length = 485
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 180/363 (49%), Gaps = 5/363 (1%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
+E + +++ L++F ++KQ WY Y+KL+ ++GK Q A LF M + G
Sbjct: 99 LDEAIRENRYESALKIFGLLRKQHWYEPRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEG 158
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
RP VY AL++A+ H + L KA + MK + CKP++ TY+IL++ C
Sbjct: 159 LRPTLDVYTALVSAYGH----SGQLDKAFCTVEDMKSVSDCKPDVYTYSILIKCCTTLGR 214
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFN 294
D + +F E+ + TYN ++D YGK M + MES L+ M +S C PDI T N
Sbjct: 215 FDLIERIFTEMSYLGIECSTVTYNTIIDGYGKADMFELMESSLTEMIESGTCLPDIFTLN 274
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
I +YG +KME+ + +P + TFN +I +YGKA + K V + M
Sbjct: 275 SFIWAYGNSGQIEKMEKWYDEFQLMGIRPDIKTFNILIRSYGKACMYEKMVSVMEFMKKR 334
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
Y+P+ +T+ +I M+G N+ + E F ++ G T +++ AY G +
Sbjct: 335 FYSPTIVTFNIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNSITYCSLVSAYSKAGYLKKV 394
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
D + N VT D+ + + AY +A E + +L M++ P+ F ++
Sbjct: 395 DSILRQIENSDVTLDTPFFNCVLSAYGQAGDVERMGELFLVMKERKCKPDNITFATMIQA 454
Query: 475 FSS 477
+++
Sbjct: 455 YNA 457
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 142 IADTGIYSKLIAVMGKKGQT-RLAMWLFSEMRNSGCRPDPSVYNALITAH---------- 190
+ D + I G GQ ++ W + E + G RPD +N LI ++
Sbjct: 267 LPDIFTLNSFIWAYGNSGQIEKMEKW-YDEFQLMGIRPDIKTFNILIRSYGKACMYEKMV 325
Query: 191 ---------------------LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA 229
+ + + K +F KMK + KPN +TY L+ A
Sbjct: 326 SVMEFMKKRFYSPTIVTFNIVIEMFGRVGNIEKMEEFFLKMK-HQGVKPNSITYCSLVSA 384
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
++A + +V+++ +++ S + D +N V+ AYG+ G ++ M + MK +CKPD
Sbjct: 385 YSKAGYLKKVDSILRQIENSDVTLDTPFFNCVLSAYGQAGDVERMGELFLVMKERKCKPD 444
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
ITF +I +Y + + + + +++ +K K
Sbjct: 445 NITFATMIQAYNAQGMIEAAQNLEVNMITTKNK 477
>gi|359487410|ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Vitis vinifera]
Length = 538
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 180/363 (49%), Gaps = 5/363 (1%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
+E + +++ L++F ++KQ WY Y+KL+ ++GK Q A LF M + G
Sbjct: 99 LDEAIRENRYESALKIFGLLRKQHWYEPRCQTYTKLLMMLGKCKQPEQASLLFEVMLSEG 158
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
RP VY AL++A+ H + L KA + MK + CKP++ TY+IL++ C
Sbjct: 159 LRPTLDVYTALVSAYGH----SGQLDKAFCTVEDMKSVSDCKPDVYTYSILIKCCTTLGR 214
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFN 294
D + +F E+ + TYN ++D YGK M + MES L+ M +S C PDI T N
Sbjct: 215 FDLIERIFTEMSYLGIECSTVTYNTIIDGYGKADMFELMESSLTEMIESGTCLPDIFTLN 274
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
I +YG +KME+ + +P + TFN +I +YGKA + K V + M
Sbjct: 275 SFIWAYGNSGQIEKMEKWYDEFQLMGIRPDIKTFNILIRSYGKACMYEKMVSVMEFMKKR 334
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
Y+P+ +T+ +I M+G N+ + E F ++ G T +++ AY G +
Sbjct: 335 FYSPTIVTFNIVIEMFGRVGNIEKMEEFFLKMKHQGVKPNSITYCSLVSAYSKAGYLKKV 394
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
D + N VT D+ + + AY +A E + +L M++ P+ F ++
Sbjct: 395 DSILRQIENSDVTLDTPFFNCVLSAYGQAGDVERMGELFLVMKERKCKPDNITFATMIQA 454
Query: 475 FSS 477
+++
Sbjct: 455 YNA 457
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 104/240 (43%), Gaps = 36/240 (15%)
Query: 142 IADTGIYSKLIAVMGKKGQT-RLAMWLFSEMRNSGCRPDPSVYNALITAH---------- 190
+ D + I G GQ ++ W + E + G RPD +N LI ++
Sbjct: 267 LPDIFTLNSFIWAYGNSGQIEKMEKW-YDEFQLMGIRPDIKTFNILIRSYGKACMYEKMV 325
Query: 191 ---------------------LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA 229
+ + + K +F KMK + KPN +TY L+ A
Sbjct: 326 SVMEFMKKRFYSPTIVTFNIVIEMFGRVGNIEKMEEFFLKMK-HQGVKPNSITYCSLVSA 384
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
++A + +V+++ +++ S + D +N V+ AYG+ G ++ M + MK +CKPD
Sbjct: 385 YSKAGYLKKVDSILRQIENSDVTLDTPFFNCVLSAYGQAGDVERMGELFLVMKERKCKPD 444
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
ITF +I +Y + + + + +++ +K K T I + A G+ +Y F+
Sbjct: 445 NITFATMIQAYNAQGMIEAAQNLEVNMITTKNKSG--TRKEQFIGFVTASAAGEPQYCFK 502
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 181/364 (49%), Gaps = 8/364 (2%)
Query: 101 NKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQ 160
N V VR+ +C L LGK+ + + +F M ++R + DT Y+ LI +GK G+
Sbjct: 108 NGCVPDVRTYNC--LISTLGKAGRLSEAFTLFAEM-RERGCVPDTFTYNSLIYGLGKVGR 164
Query: 161 TRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNI 220
++ AM L EM GC PD Y++LIT K KA FQ+MK R KP+
Sbjct: 165 SQKAMELLEEMERHGCPPDVMTYSSLITGL----GKDGETVKAFKLFQEMKRRGR-KPDS 219
Query: 221 VTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSR 280
+T+ L+ A +A VD L E+ E + P + TYN ++ +GK G + E ++L
Sbjct: 220 ITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDE 279
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
MK N CKPD++T++ LI K D+ QV K + P T+N++I GKA L
Sbjct: 280 MKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGL 339
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
A +F +M + P +TY +IT G V A +F+E+ +G + T +
Sbjct: 340 LNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCS 399
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
++ G +AD LF G++PD TY + + + +K+ + M+++G
Sbjct: 400 IITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESG 459
Query: 461 IVPN 464
++P+
Sbjct: 460 LLPD 463
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 161/365 (44%), Gaps = 22/365 (6%)
Query: 100 LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG 159
LN K + E LLFEEL K+ KW D YS LI +G+ G
Sbjct: 16 LNALAKAGQCEEAQLLFEEL-KAAKW----------------TPDVVSYSCLINSLGRAG 58
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
+ A+ + +EM+ GC+P+ YN L+ KA +AL +M+ C P+
Sbjct: 59 KWEAALEVVAEMQAKGCKPNLWTYNTLV----DCLGKAGQFDEALRLLAEMRD-NGCVPD 113
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+ TYN L+ +A + + LF E+ E PD +TYN ++ GK G ++ +L
Sbjct: 114 VRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLE 173
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
M+ + C PD++T++ LI GK K ++F+ + KP TF +++ GKA
Sbjct: 174 EMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAG 233
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLN 399
A + +M P +TY +I +G ++ A + DE+ + G V T +
Sbjct: 234 RVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYS 293
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
++ EA + + G PD+ TY L KA + +L RM+
Sbjct: 294 CLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSK 353
Query: 460 GIVPN 464
G P+
Sbjct: 354 GCNPD 358
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 176/385 (45%), Gaps = 41/385 (10%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L LGK + ++ ++F+ M K+R D+ ++ L+ +GK G+ A+ L EM+
Sbjct: 190 LITGLGKDGETVKAFKLFQEM-KRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKER 248
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G +P YNALI D L +A +MK CKP++VTY+ L+ +A
Sbjct: 249 GVKPGVVTYNALIAGFGKVGD----LVEAYNLLDEMK-RNGCKPDVVTYSCLITGLIKAS 303
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+D+ + K++ + PD TYN +++ GK G++ + + RMKS C PD++T++
Sbjct: 304 QLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYS 363
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
LI + GK + +F+ + +P L T+ S+I GKA A+ +F +M
Sbjct: 364 TLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGK 423
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY--------- 405
+P ITY + G AR+IF+++ + G V+T +A+L
Sbjct: 424 GLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDA 483
Query: 406 ---------------------CMNGLPT-----EADLLFENSHNMGVTPDSSTYKLLYKA 439
C+ L + EA L + +++ G+ P +S+Y L A
Sbjct: 484 CGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDA 543
Query: 440 YTKANMKELVQKLLKRMEQNGIVPN 464
KA L+ +++ G P+
Sbjct: 544 LAKAGRVSEAFNTLEDLKEQGGKPD 568
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 149/317 (47%), Gaps = 5/317 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + K GQ A LF E++ + PD Y+ LI ++ +A AL
Sbjct: 12 YNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLI----NSLGRAGKWEAALEVV 67
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M+ + CKPN+ TYN L+ +A D+ L E+ ++ PD+ TYN ++ GK
Sbjct: 68 AEMQA-KGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + E ++ + M+ C PD T+N LI GK K ++ + + P + T
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
++S+I GK KA +FQ+M P IT+ ++ G V A E+ DE+
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ G V T NA++ + G EA L + G PD TY L KA+ +
Sbjct: 247 ERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLD 306
Query: 448 LVQKLLKRMEQNGIVPN 464
++LK+ME+ G P+
Sbjct: 307 EACQVLKKMEKEGCPPD 323
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 170/381 (44%), Gaps = 39/381 (10%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + LGK+ + LE+ M K+R Y+ LIA GK G A L EM+ +
Sbjct: 225 LMDALGKAGRVDDALELLDEM-KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRN 283
Query: 175 GCRPDPSVYNALITAHLHTRD-------------------------------KAKALAKA 203
GC+PD Y+ LIT + KA L A
Sbjct: 284 GCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDA 343
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F +MK + C P++VTY+ L+ A +A V+ LF+E+ + PD++TY ++
Sbjct: 344 GRLFDRMKS-KGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIIT 402
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
GK G + + + + S M+ PD+IT+N ++S G+ F + ++F+ + S P
Sbjct: 403 VLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLP 462
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY-EC--IITMYGYCDNVSRAR 380
+ T++++++ K + A + +++ + + EC I+T +G NV A
Sbjct: 463 DVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWG---NVDEAH 519
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
E+ + G S+ NA+++A G +EA E+ G PD +Y L A
Sbjct: 520 ELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISAL 579
Query: 441 TKANMKELVQKLLKRMEQNGI 461
+ + +LL+ M + G+
Sbjct: 580 GQTGQIDTAFELLEEMSKRGL 600
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 128/255 (50%), Gaps = 2/255 (0%)
Query: 210 MKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG 269
MKG PN+VTYN LL A A+A ++ LF+EL + PD+ +Y+ ++++ G+ G
Sbjct: 1 MKGFP--SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAG 58
Query: 270 MIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFN 329
+ V++ M++ CKP++ T+N L+D GK FD+ ++ + + P + T+N
Sbjct: 59 KWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYN 118
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
+I GKA +A +F +M P TY +I G +A E+ +E+ +
Sbjct: 119 CLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERH 178
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
G V T ++++ +G +A LF+ G PDS T+ L A KA +
Sbjct: 179 GCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDA 238
Query: 450 QKLLKRMEQNGIVPN 464
+LL M++ G+ P
Sbjct: 239 LELLDEMKERGVKPG 253
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 88/227 (38%), Gaps = 52/227 (22%)
Query: 105 KVVRSEHCFLLFEE-------------------LGKSDKWLQCLEVFRWMQKQRWYIADT 145
K R E +LFEE LGK+ + +F M + + D
Sbjct: 371 KAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEM-RGKGLSPDV 429
Query: 146 GIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKA 203
Y+ + +G+ G+ + A +F +M+ SG PD + Y+AL+ T+ D A L K
Sbjct: 430 ITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKE 489
Query: 204 L----GYFQKMKGMERCK-------------------------PNIVTYNILLRACAQAR 234
L F +K + C P +YN L+ A A+A
Sbjct: 490 LIEQGCAFDSLK-FDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAG 548
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
V + ++L E PDI +Y+ ++ A G+ G I +L M
Sbjct: 549 RVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEM 595
>gi|297833394|ref|XP_002884579.1| EMB2750 [Arabidopsis lyrata subsp. lyrata]
gi|297330419|gb|EFH60838.1| EMB2750 [Arabidopsis lyrata subsp. lyrata]
Length = 486
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 176/353 (49%), Gaps = 5/353 (1%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+WLQ LEVF +++Q +Y G Y KL+ ++GK GQ A LF EM G P +Y
Sbjct: 103 QWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELY 162
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
AL+ A+ ++ + A MKG+ +C+P++ TY+ LL+AC A D V++L+
Sbjct: 163 TALLAAYT----RSNLIDDAFSILDTMKGLPQCQPDVFTYSTLLKACVDASQFDLVDSLY 218
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGK 302
KE+ E ++ P+ T N V+ YG+ G +ME VLS M S CKPD+ T N+++ +G
Sbjct: 219 KEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGN 278
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
D ME ++ + +P TFN +I +YGK R+ K V + M +++ + T
Sbjct: 279 MGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTST 338
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y II + + FD++ G T ++ Y GL + + +
Sbjct: 339 YNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAA 398
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ +++ Y + A KA+ ++++ RM++ V + R F +E +
Sbjct: 399 KFEIPENTAFYNAVIAACAKADDLIEMERVYTRMKERQCVCDSRTFEIMVEAY 451
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 88/225 (39%), Gaps = 47/225 (20%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D + +++V G G+ + + + RN G P+ +N LI ++ R K ++
Sbjct: 265 DVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDK-MSSV 323
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT------ 257
+ Y +K++ TYN ++ A A + + F ++ + D T
Sbjct: 324 MEYMRKLE----FPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLIN 379
Query: 258 -----------------------------YNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
YN V+ A K + EME V +RMK QC
Sbjct: 380 GYANAGLFHKVISSVQLAAKFEIPENTAFYNAVIAACAKADDLIEMERVYTRMKERQCVC 439
Query: 289 DIITFNLLIDSYGKRQAFDK---MEQVFKSLMH----SKEKPTLP 326
D TF +++++Y K DK +EQ + LM +KE LP
Sbjct: 440 DSRTFEIMVEAYEKEGMNDKIYYLEQERQKLMDRAVATKEMENLP 484
>gi|297736801|emb|CBI26002.3| unnamed protein product [Vitis vinifera]
Length = 469
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 173/347 (49%), Gaps = 14/347 (4%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+WLQ LEVF +++Q +Y G Y KL+ ++GK GQ A LF M GC P +Y
Sbjct: 123 QWLQALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDTMVEEGCEPTTELY 182
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
AL+ ++ ++ + +A +MK + RC+P++ TY+ LL+AC A + V +L+
Sbjct: 183 TALLASYC----RSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKACVDASRFELVESLY 238
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGK 302
+E+ + P+ T N V+ YGK G EME VLS M +S KPD+ T N ++ +G
Sbjct: 239 EEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGN 298
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ + ME+ ++ + +P TFN +I YGK R+ K V + M +++ + T
Sbjct: 299 KGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTST 358
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL----- 417
Y +I + + FD++ G T ++ Y GL +A+ L
Sbjct: 359 YNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKAEDLIEMER 418
Query: 418 -FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL---LKRMEQNG 460
F + PDS+TY ++ +AY K M + + L +RM +G
Sbjct: 419 VFNRMKDKHCQPDSTTYSIMVEAYKKEGMNDKIYDLEQERQRMVADG 465
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 90/196 (45%), Gaps = 11/196 (5%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
GK+ K+ + +V M + D + ++++ G KGQ + + + RN G P+
Sbjct: 261 GKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNFGIEPE 320
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQV 239
+N LI A+ R K ++ + Y +K++ TYN ++ A + + +
Sbjct: 321 TRTFNILIGAYGKKRMYDK-MSSVMEYMRKLQ----FPWTTSTYNNVIEAFSDVGDAKNM 375
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIK------EMESVLSRMKSNQCKPDIITF 293
F ++ + D T+ ++ Y G+ EME V +RMK C+PD T+
Sbjct: 376 EYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKAEDLIEMERVFNRMKDKHCQPDSTTY 435
Query: 294 NLLIDSYGKRQAFDKM 309
++++++Y K DK+
Sbjct: 436 SIMVEAYKKEGMNDKI 451
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 111/270 (41%), Gaps = 51/270 (18%)
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
K +AL F+ ++ +P TY LL ++ + + LF + E P
Sbjct: 122 KQWLQALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDTMVEEGCEPTTEL 181
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKS-NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
Y ++ +Y ++ +I E S+L++MK+ +C+PD+ T++ L+ + F+ +E ++
Sbjct: 182 YTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKACVDASRFELVESLY--- 238
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
++M TP+ +T +++ YG
Sbjct: 239 --------------------------------EEMDVRSITPNTVTQNIVLSGYGKAGK- 265
Query: 377 SRAREIFDELSKLGKDM--------KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
FDE+ K+ M V T+N +L + G + +E N G+ P
Sbjct: 266 ------FDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNFGIEP 319
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
++ T+ +L AY K M + + +++ M +
Sbjct: 320 ETRTFNILIGAYGKKRMYDKMSSVMEYMRK 349
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 16/154 (10%)
Query: 94 EPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIA 153
EP RT N +L GK + + V +M+K + + T Y+ +I
Sbjct: 318 EPETRTFN------------ILIGAYGKKRMYDKMSSVMEYMRKLQ-FPWTTSTYNNVIE 364
Query: 154 VMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALGYFQKMK 211
G + + F +MR G + D + LI + + KA+ L + F +MK
Sbjct: 365 AFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKAEDLIEMERVFNRMK 424
Query: 212 GMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
+ C+P+ TY+I++ A + D++ L +E
Sbjct: 425 D-KHCQPDSTTYSIMVEAYKKEGMNDKIYDLEQE 457
>gi|15230719|ref|NP_187294.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207273|sp|Q9SQU6.1|PP216_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g06430, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2750; Flags: Precursor
gi|6437546|gb|AAF08573.1|AC011623_6 unknown protein [Arabidopsis thaliana]
gi|20466300|gb|AAM20467.1| unknown protein [Arabidopsis thaliana]
gi|30387593|gb|AAP31962.1| At3g06430 [Arabidopsis thaliana]
gi|332640870|gb|AEE74391.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 486
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 175/353 (49%), Gaps = 5/353 (1%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+WLQ LEVF +++Q +Y G Y KL+ ++GK GQ A LF EM G P +Y
Sbjct: 103 QWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELY 162
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
AL+ A+ ++ + A KMK +C+P++ TY+ LL+AC A D V++L+
Sbjct: 163 TALLAAYT----RSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLY 218
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGK 302
KE+ E ++ P+ T N V+ YG+ G +ME VLS M S CKPD+ T N+++ +G
Sbjct: 219 KEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGN 278
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
D ME ++ + +P TFN +I +YGK R+ K V + M +++ + T
Sbjct: 279 MGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTST 338
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y II + + FD++ G T ++ Y GL + + +
Sbjct: 339 YNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAA 398
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ +++ Y + A KA+ ++++ RM++ V + R F +E +
Sbjct: 399 KFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAY 451
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 120/296 (40%), Gaps = 37/296 (12%)
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
+T L K +AL F ++ +P TY LL ++ ++ LF E+
Sbjct: 91 VTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEM 150
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS-NQCKPDIITF------------ 293
E L P + Y ++ AY ++ +I + S+L +MKS QC+PD+ T+
Sbjct: 151 LEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQ 210
Query: 294 -----------------------NLLIDSYGKRQAFDKMEQVFKSLMHSKE-KPTLPTFN 329
N+++ YG+ FD+ME+V ++ S KP + T N
Sbjct: 211 FDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMN 270
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
++ +G E ++K P T+ +I YG + + + + KL
Sbjct: 271 IILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKL 330
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
ST N ++EA+ G +L F+ + G+ D+ T+ L Y A +
Sbjct: 331 EFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGL 386
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 85/218 (38%), Gaps = 47/218 (21%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
+++V G G+ + + + RN G P+ +N LI ++ R K ++ + Y +K+
Sbjct: 272 ILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDK-MSSVMEYMRKL 330
Query: 211 KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT------------- 257
+ TYN ++ A A + + F ++ + D T
Sbjct: 331 E----FPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGL 386
Query: 258 ----------------------YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
YN V+ A K + EME V RMK QC D TF +
Sbjct: 387 FHKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEI 446
Query: 296 LIDSYGKRQAFDK---MEQVFKSLMH----SKEKPTLP 326
++++Y K DK +EQ + LM +KE LP
Sbjct: 447 MVEAYEKEGMNDKIYYLEQERQKLMDRTVATKEMENLP 484
>gi|449443726|ref|XP_004139628.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Cucumis sativus]
Length = 456
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 185/377 (49%), Gaps = 9/377 (2%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W L+VF +++Q WY G+Y KLI ++GK Q A LF EM GC Y
Sbjct: 79 RWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESY 138
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
AL++A+ ++ L +A +MK C+P++ TY+IL+++C Q ++ L
Sbjct: 139 TALLSAY----SRSGLLDEAFSILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLL 194
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGK 302
++ + P+ TYN +DAYGK M EMES+L M + CKPD+ T N + ++G+
Sbjct: 195 SDMVTRGIKPNTITYNTFIDAYGKAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGR 254
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ ME+ ++ + +P++ TFN ++ +YGKA K V + M Y+ + +T
Sbjct: 255 SGQLETMEKCYEKFQEAGIQPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVT 314
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y +I +G N+ + +F + TL +++ AY G + D +
Sbjct: 315 YNIVIDAFGRAGNLKQMEHLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDSVLNLVE 374
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGS 482
N + D+ Y L AY + ++K+L MEQ G P+K + +S G
Sbjct: 375 NSDIMLDTVFYNCLVDAYGRLECFAEMKKVLGMMEQRGCKPDKTTYRTMARAYSD---GG 431
Query: 483 QSGSAKTDLTRSLSTAK 499
+ AK ++ ++TA+
Sbjct: 432 MANHAK-EIQELITTAE 447
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 133/315 (42%), Gaps = 37/315 (11%)
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
LH R AL F+ ++ +P Y L+ + + ++ LF+E+ E
Sbjct: 71 LHDRITTLRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQQEKAYELFQEMIEEG 130
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK-SNQCKPDI------------------- 290
+Y ++ AY ++G++ E S+L+ MK S C+PD+
Sbjct: 131 CEVSHESYTALLSAYSRSGLLDEAFSILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKA 190
Query: 291 ----------------ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-KPTLPTFNSMII 333
IT+N ID+YGK + F +ME + +++ KP + T NS +
Sbjct: 191 QTLLSDMVTRGIKPNTITYNTFIDAYGKAKMFAEMESILVDMLNDDGCKPDVWTMNSTLR 250
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
+G++ E ++K PS T+ ++ YG ++ + + + + K
Sbjct: 251 AFGRSGQLETMEKCYEKFQEAGIQPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSW 310
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
+ T N +++A+ G + + LF + + P T L +AY +A +E + +L
Sbjct: 311 TIVTYNIVIDAFGRAGNLKQMEHLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDSVL 370
Query: 454 KRMEQNGIVPNKRFF 468
+E + I+ + F+
Sbjct: 371 NLVENSDIMLDTVFY 385
>gi|356552149|ref|XP_003544432.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Glycine max]
Length = 481
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 207/427 (48%), Gaps = 19/427 (4%)
Query: 66 PRSKRGRKSEELE------SKELVRVLMRSFSD---KEPLVRTLNKYVKVVRSEHCF--L 114
P+++RG + E L+ S ELV+ + S E +R ++ K + +
Sbjct: 31 PKTRRGFRVESLKRSSKPASAELVKDPNKDLSRILRTEAAIRGVHNKAKSSSHKQLWPKA 90
Query: 115 LFEELGKSDKWLQ---CLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM 171
L E L + K + LE+F ++KQ WY Y+KL+ ++GK Q A LF M
Sbjct: 91 LLESLDDAIKRCRSHSALEIFALLRKQYWYQPRCRTYAKLLMMLGKCRQPEEASLLFEIM 150
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
+ G +P VY AL++A+ ++ L +A + MK + C+P++ TY+IL+R CA
Sbjct: 151 LSEGLKPTVDVYTALVSAY----GQSGLLDQAFSTVEDMKSVVDCEPDVYTYSILIRCCA 206
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN-QCKPDI 290
+ R D + + E+ + + TYN ++D YGK M ++M+ L+ M N PD+
Sbjct: 207 KFRRFDLIEHVLAEMSYLGIKCNCVTYNSIIDGYGKASMFEQMDDALNDMIENGNSHPDV 266
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
T N + +YG DKME+ + KP + TFN+MI +YGKA + K + V
Sbjct: 267 FTLNSFVGAYGNAGQIDKMEKWYDEFQLMGIKPDITTFNTMIKSYGKAGMYEKMKTVMDF 326
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M +TP+ +TY +I ++G + + + F ++ LG T +++ AY G
Sbjct: 327 MEKRFFTPTIVTYNTVIEVFGKAGEIEKMDQHFLKMKHLGVKPNSITYCSLVSAYSKVGC 386
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
+ D + + N V D+ + + AY +A + + +L M + P+ F
Sbjct: 387 IDKVDSIMRHVENSDVVLDTPFFNCIISAYGQAGNLKKMGELFLAMRERKCEPDNITFAC 446
Query: 471 ALETFSS 477
++++++
Sbjct: 447 MIQSYNT 453
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 21/227 (9%)
Query: 92 DKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKL 151
+ P V TLN +V + G+ DK + + F+ M + D ++ +
Sbjct: 261 NSHPDVFTLNSFVGA---------YGNAGQIDKMEKWYDEFQLMGIK----PDITTFNTM 307
Query: 152 IAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK 211
I GK G + M P YN +I KA + K +F KMK
Sbjct: 308 IKSYGKAGMYEKMKTVMDFMEKRFFTPTIVTYNTVIEVF----GKAGEIEKMDQHFLKMK 363
Query: 212 GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMI 271
+ KPN +TY L+ A ++ +D+V+++ + + S + D +N ++ AYG+ G +
Sbjct: 364 HLG-VKPNSITYCSLVSAYSKVGCIDKVDSIMRHVENSDVVLDTPFFNCIISAYGQAGNL 422
Query: 272 KEMESVLSRMKSNQCKPDIITFNLLIDSY---GKRQAFDKMEQVFKS 315
K+M + M+ +C+PD ITF +I SY G +A +E + S
Sbjct: 423 KKMGELFLAMRERKCEPDNITFACMIQSYNTQGMTEAVQNLENMMIS 469
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 1/137 (0%)
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
Y P TY ++ M G C A +F+ + G V A++ AY +GL +A
Sbjct: 120 YQPRCRTYAKLLMMLGKCRQPEEASLLFEIMLSEGLKPTVDVYTALVSAYGQSGLLDQAF 179
Query: 416 LLFENSHNM-GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
E+ ++ PD TY +L + K +L++ +L M GI N + ++
Sbjct: 180 STVEDMKSVVDCEPDVYTYSILIRCCAKFRRFDLIEHVLAEMSYLGIKCNCVTYNSIIDG 239
Query: 475 FSSSLAGSQSGSAKTDL 491
+ + Q A D+
Sbjct: 240 YGKASMFEQMDDALNDM 256
>gi|449475395|ref|XP_004154439.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Cucumis sativus]
Length = 511
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 185/377 (49%), Gaps = 9/377 (2%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W L+VF +++Q WY G+Y KLI ++GK Q A LF EM GC Y
Sbjct: 134 RWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESY 193
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
AL++A+ ++ L +A +MK C+P++ TY+IL+++C Q ++ L
Sbjct: 194 TALLSAY----SRSGLLDEAFSILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLL 249
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGK 302
++ + P+ TYN +DAYGK M EMES+L M + CKPD+ T N + ++G+
Sbjct: 250 SDMVTRGIKPNTITYNTFIDAYGKAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGR 309
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ ME+ ++ + +P++ TFN ++ +YGKA K V + M Y+ + +T
Sbjct: 310 SGQLETMEKCYEKFQEAGIQPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVT 369
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y +I +G N+ + +F + TL +++ AY G + D +
Sbjct: 370 YNIVIDAFGRAGNLKQMEHLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDSVLNLVE 429
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGS 482
N + D+ Y L AY + ++K+L MEQ G P+K + +S G
Sbjct: 430 NSDIMLDTVFYNCLVDAYGRLECFAEMKKVLGMMEQRGCKPDKTTYRTMARAYSD---GG 486
Query: 483 QSGSAKTDLTRSLSTAK 499
+ AK ++ ++TA+
Sbjct: 487 MANHAK-EIQELITTAE 502
>gi|356565453|ref|XP_003550954.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Glycine max]
Length = 488
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 172/352 (48%), Gaps = 5/352 (1%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
WLQ L+VF +++Q +Y G Y KLI ++GK GQ A LF+ M G P P +Y
Sbjct: 106 WLQALQVFDMLREQTFYQPKEGTYMKLIVLLGKSGQPHRAHQLFTTMIEEGLEPTPELYT 165
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
AL+ A+ ++ + +A +MK + RC+P++ TY+ L++ C A D V L++
Sbjct: 166 ALLAAYC----RSNMIDEAFSVLNEMKKLPRCQPDVFTYSTLIKVCVDAFKFDLVELLYE 221
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGKR 303
E+ E + P+ T N V+ YGK GM +ME VLS M S CKPD+ T N +I +G
Sbjct: 222 EMAERSIMPNTVTQNIVLGGYGKAGMFDQMEKVLSSMLLSTTCKPDVWTMNTIISVFGNM 281
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
D ME+ ++ + +P TFN +I YGK R+ K V + M +++ + TY
Sbjct: 282 GQIDMMEKWYEKFRYFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTY 341
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+I + + FD++ G TL ++ Y GL + +
Sbjct: 342 NNVIEAFADAGDAKHMECTFDQMRAEGMKADTKTLCCLINGYANAGLFHKVISSVRLAGK 401
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ + + + Y + A KA ++++ KRM+ + P+ + +E +
Sbjct: 402 LEIPENITFYNAVLSACAKAEDLMEMERVFKRMKDSQCQPDDTTYTIMIEAY 453
>gi|255553476|ref|XP_002517779.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543051|gb|EEF44586.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 486
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 173/356 (48%), Gaps = 5/356 (1%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
K +W L++F ++KQ WY Y+KL+ ++GK Q A LF M+ G RP
Sbjct: 104 KERRWKSALKIFELLRKQHWYEPRCQTYTKLLMMLGKCRQPEEARLLFEVMQTEGLRPTI 163
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
VY AL++A+ ++ LAKA +MK + CKP++ TY++L+ C + D +
Sbjct: 164 DVYTALVSAY----GESGLLAKAFSTVDEMKSVSDCKPDVYTYSVLINICTKLHRFDLIG 219
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDS 299
+ E+ + T+N +++ YGK M +EME+ L+ M + PD+ TFN +I +
Sbjct: 220 RILSEMSYLGVECSTVTFNTIINGYGKAKMFREMENSLTNMIEIGNSVPDLFTFNSVIGA 279
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
YG +KME+ + P + TFN +I +YGKA + K V + M + P+
Sbjct: 280 YGNSGRIEKMEKWYNEFQLMGISPDIKTFNILIKSYGKAGMYEKINSVIEFMKKRFFPPT 339
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
+TY II +G ++ E F + LG T +++ AY GL + + +
Sbjct: 340 VVTYNIIIETFGRAGDIENMDEYFKTMKHLGMKPNAITYCSLVSAYSKAGLLMKVNSILR 399
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
N V D++ + + AY +A + + +L M + +P+ F ++ +
Sbjct: 400 QVENSDVVLDTTFFNCIINAYGQAGDVDKMAELFLEMRERECMPDNVTFATMIQAY 455
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 148/333 (44%), Gaps = 41/333 (12%)
Query: 177 RPDPSVYNAL----ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
+ D S YN L + L K + AL F+ ++ +P TY LL +
Sbjct: 81 KADSSKYNRLWPKAVLEALDDAIKERRWKSALKIFELLRKQHWYEPRCQTYTKLLMMLGK 140
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS-NQCKPDII 291
R ++ LF+ + L P I Y ++ AYG++G++ + S + MKS + CKPD+
Sbjct: 141 CRQPEEARLLFEVMQTEGLRPTIDVYTALVSAYGESGLLAKAFSTVDEMKSVSDCKPDVY 200
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
T+++LI+ K FD + ++ + + + + TFN++I YGKA++ + E M
Sbjct: 201 TYSVLINICTKLHRFDLIGRILSEMSYLGVECSTVTFNTIINGYGKAKMFREMENSLTNM 260
Query: 352 TAM-KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
+ P T+ +I YG + + + ++E +G + T N ++++Y G+
Sbjct: 261 IEIGNSVPDLFTFNSVIGAYGNSGRIEKMEKWYNEFQLMGISPDIKTFNILIKSYGKAGM 320
Query: 411 -----------------PT------------------EADLLFENSHNMGVTPDSSTYKL 435
PT D F+ ++G+ P++ TY
Sbjct: 321 YEKINSVIEFMKKRFFPPTVVTYNIIIETFGRAGDIENMDEYFKTMKHLGMKPNAITYCS 380
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
L AY+KA + V +L+++E + +V + FF
Sbjct: 381 LVSAYSKAGLLMKVNSILRQVENSDVVLDTTFF 413
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 128/283 (45%), Gaps = 33/283 (11%)
Query: 87 MRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWL--QCLEV------------- 131
M+S SD +P V T + + + H F L + +L +C V
Sbjct: 189 MKSVSDCKPDVYTYSVLINICTKLHRFDLIGRILSEMSYLGVECSTVTFNTIINGYGKAK 248
Query: 132 -FRWMQKQRWYIADTG-------IYSKLIAVMGKKGQT-RLAMWLFSEMRNSGCRPDPSV 182
FR M+ + + G ++ +I G G+ ++ W ++E + G PD
Sbjct: 249 MFREMENSLTNMIEIGNSVPDLFTFNSVIGAYGNSGRIEKMEKW-YNEFQLMGISPDIKT 307
Query: 183 YNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL 242
+N LI ++ KA K + MK P +VTYNI++ +A +++ ++
Sbjct: 308 FNILIKSY----GKAGMYEKINSVIEFMKK-RFFPPTVVTYNIIIETFGRAGDIENMDEY 362
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
FK + + P+ TY ++ AY K G++ ++ S+L +++++ D FN +I++YG+
Sbjct: 363 FKTMKHLGMKPNAITYCSLVSAYSKAGLLMKVNSILRQVENSDVVLDTTFFNCIINAYGQ 422
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
DKM ++F + + P TF +MI Y R QG E
Sbjct: 423 AGDVDKMAELFLEMRERECMPDNVTFATMIQAY---RGQGMTE 462
>gi|357125122|ref|XP_003564244.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Brachypodium distachyon]
Length = 502
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 168/342 (49%), Gaps = 4/342 (1%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W L+VF M+ Q WY GIY KLI ++GK Q A LF M + GC P+ Y
Sbjct: 130 RWESALKVFELMRDQVWYRPYVGIYIKLITMLGKCKQPGKAHELFQAMVDEGCAPNLESY 189
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
AL++A+ ++ + +A +MK C+P++ TY+IL+++C A + D+V L
Sbjct: 190 TALVSAY----SRSGSFDRAFSLLDRMKATPGCRPDVQTYSILIKSCLHAYDFDKVKDLL 245
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR 303
++ + P+ TYN ++DAYGK G EMES L M S +CKPD+ T N + ++G
Sbjct: 246 ADMACGGIRPNTVTYNTLVDAYGKAGRFAEMESTLLEMLSEKCKPDVWTMNSTLRAFGSS 305
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
+ ME ++ S P + T+N ++ +YGKA++ K V + M Y+ + +TY
Sbjct: 306 GQIEMMESCYEKFQASGISPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTY 365
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+I +G ++ + IF + TL +++ AY + + + N
Sbjct: 366 NVVIDAFGRAGDLEQMEYIFRLMKSDRIKPNCVTLCSLIRAYGRADQVKKIETVLRIIEN 425
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
T D + L AY + + +L M+ + P+K
Sbjct: 426 SDTTLDIVFFNCLVDAYGRVGCLAEMWDVLNMMKLERVSPDK 467
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 122/257 (47%), Gaps = 27/257 (10%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
+T Y+ L+ GK G+ EM + C+PD N+ + +A
Sbjct: 256 NTVTYNTLVDAYGKAGRFAEMESTLLEMLSEKCKPDVWTMNSTL--------------RA 301
Query: 204 LGYFQKMKGMERC---------KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
G +++ ME C PNI TYNILL + +A+ +++ A+ + + + +
Sbjct: 302 FGSSGQIEMMESCYEKFQASGISPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWT 361
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
I TYN V+DA+G+ G +++ME + MKS++ KP+ +T LI +YG+ K+E V +
Sbjct: 362 IVTYNVVIDAFGRAGDLEQMEYIFRLMKSDRIKPNCVTLCSLIRAYGRADQVKKIETVLR 421
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY---G 371
+ +S + FN ++ YG+ + V M + +P +T +I + G
Sbjct: 422 IIENSDTTLDIVFFNCLVDAYGRVGCLAEMWDVLNMMKLERVSPDKVTCTTMIKWFLVKG 481
Query: 372 YCDN-VSRAREIFDELS 387
D+ V R++ D LS
Sbjct: 482 IDDHRVQHLRDLKDGLS 498
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 36/196 (18%), Positives = 86/196 (43%), Gaps = 7/196 (3%)
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
+P + + LI GK + K ++F++++ P L ++ +++ Y ++ G +
Sbjct: 148 RPYVGIYIKLITMLGKCKQPGKAHELFQAMVDEGCAPNLESYTALVSAYSRS---GSFDR 204
Query: 347 VFQKMTAMKYTPS----FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
F + MK TP TY +I + + + +++ +++ G T N ++
Sbjct: 205 AFSLLDRMKATPGCRPDVQTYSILIKSCLHAYDFDKVKDLLADMACGGIRPNTVTYNTLV 264
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+AY G E + + PD T +A+ + E+++ ++ + +GI
Sbjct: 265 DAYGKAGRFAEMESTLLEMLSEKCKPDVWTMNSTLRAFGSSGQIEMMESCYEKFQASGIS 324
Query: 463 PNKRFFLEALETFSSS 478
PN + + L+++ +
Sbjct: 325 PNIKTYNILLDSYGKA 340
>gi|115466680|ref|NP_001056939.1| Os06g0172000 [Oryza sativa Japonica Group]
gi|55773690|dbj|BAD72273.1| putative PPR2 [Oryza sativa Japonica Group]
gi|113594979|dbj|BAF18853.1| Os06g0172000 [Oryza sativa Japonica Group]
gi|215697063|dbj|BAG91057.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218197679|gb|EEC80106.1| hypothetical protein OsI_21852 [Oryza sativa Indica Group]
gi|222635046|gb|EEE65178.1| hypothetical protein OsJ_20289 [Oryza sativa Japonica Group]
Length = 511
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 170/342 (49%), Gaps = 4/342 (1%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W L+VF M+ Q WY GIY KLI ++GK Q A LF M + GC P+ Y
Sbjct: 139 RWDSALKVFDLMRDQVWYRPYVGIYVKLITMLGKCKQPERAHELFQAMVDEGCAPNLESY 198
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
AL++A+ ++ +A ++MK C+P++ TY+IL+++C A + ++V L
Sbjct: 199 TALVSAY----SRSGRFDRAFSLLEQMKATPGCRPDVQTYSILIKSCLHAYDFERVKYLM 254
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR 303
+++ + + P++ TYN ++DAYGK G EMES L M + CKPD+ T N + ++G
Sbjct: 255 EDMARAGIRPNVVTYNTLIDAYGKAGRFAEMESTLLEMLTENCKPDVWTMNSTLRAFGGS 314
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
+ ME ++ S P + T+N ++ +YGKA++ K V + M Y+ + +TY
Sbjct: 315 GQIETMESCYEKFQASGISPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTY 374
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+I +G ++ + IF + TL +++ AY G + + N
Sbjct: 375 NVVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVTLCSLVRAYGRAGDVKKIKTVLRIVEN 434
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+T D + L A+ + + +L M+ P+K
Sbjct: 435 SDITLDIVFFNCLVDAFGRVGCLAEMWDVLDIMKLQRCKPDK 476
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 23/232 (9%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI GK G+ EM C+PD N+ + +A G
Sbjct: 269 YNTLIDAYGKAGRFAEMESTLLEMLTENCKPDVWTMNSTL--------------RAFGGS 314
Query: 208 QKMKGMERC---------KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
+++ ME C PNI TYNILL + +A+ +++ A+ + + + + I TY
Sbjct: 315 GQIETMESCYEKFQASGISPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTY 374
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N V+DA+G+ G +++ME + MKS + KP+ +T L+ +YG+ K++ V + + +
Sbjct: 375 NVVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVTLCSLVRAYGRAGDVKKIKTVLRIVEN 434
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
S + FN ++ +G+ + V M + P +T +I +
Sbjct: 435 SDITLDIVFFNCLVDAFGRVGCLAEMWDVLDIMKLQRCKPDKVTCTTMIKWF 486
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 72/143 (50%), Gaps = 5/143 (3%)
Query: 183 YNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL 242
YN +I A +A L + F+ MK ER KPN VT L+RA +A +V ++ +
Sbjct: 374 YNVVIDAF----GRAGDLEQMEYIFRLMKS-ERIKPNCVTLCSLVRAYGRAGDVKKIKTV 428
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
+ + S + DI +N ++DA+G+ G + EM VL MK +CKPD +T +I +
Sbjct: 429 LRIVENSDITLDIVFFNCLVDAFGRVGCLAEMWDVLDIMKLQRCKPDKVTCTTMIKWFLI 488
Query: 303 RQAFDKMEQVFKSLMHSKEKPTL 325
+ D Q + L + K +
Sbjct: 489 KGIDDHRVQYLRDLKDGRSKDNI 511
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/196 (18%), Positives = 88/196 (44%), Gaps = 7/196 (3%)
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
+P + + LI GK + ++ ++F++++ P L ++ +++ Y ++ G+ +
Sbjct: 157 RPYVGIYVKLITMLGKCKQPERAHELFQAMVDEGCAPNLESYTALVSAYSRS---GRFDR 213
Query: 347 VFQKMTAMKYTPS----FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
F + MK TP TY +I + + R + + +++++ G V T N ++
Sbjct: 214 AFSLLEQMKATPGCRPDVQTYSILIKSCLHAYDFERVKYLMEDMARAGIRPNVVTYNTLI 273
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+AY G E + PD T +A+ + E ++ ++ + +GI
Sbjct: 274 DAYGKAGRFAEMESTLLEMLTENCKPDVWTMNSTLRAFGGSGQIETMESCYEKFQASGIS 333
Query: 463 PNKRFFLEALETFSSS 478
PN + + L+++ +
Sbjct: 334 PNIKTYNILLDSYGKA 349
>gi|413944457|gb|AFW77106.1| hypothetical protein ZEAMMB73_510937 [Zea mays]
Length = 492
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 169/342 (49%), Gaps = 4/342 (1%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W L+VF M+ Q WY GIY KLI ++GK Q A LF M + GC P+ Y
Sbjct: 120 RWDSALKVFELMRDQVWYKPHIGIYIKLITMLGKCKQPEKAHQLFQAMIDEGCAPNLQSY 179
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
AL++ T ++ +A +MK C+P++ TY+IL+++C A + ++V +L
Sbjct: 180 TALVS----TYSRSGRFREAFDLLDRMKDTPGCQPDVQTYSILIKSCLHAYDFEKVKSLL 235
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR 303
++ + + P+ TYN ++DAYGK G EMES L +M S CKPD+ T N + ++G
Sbjct: 236 ADMARAGIPPNTVTYNTLIDAYGKAGRFAEMESTLLKMLSQNCKPDVWTMNSTLRAFGSS 295
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
+ ME ++ S P + T+N ++ +YGKA++ K V + M Y+ + +TY
Sbjct: 296 GQIETMESCYEKFQASGIVPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTY 355
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+I +G ++ + IF + TL +++ AY G + N
Sbjct: 356 NVVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVTLCSVVRAYGRAGEVKKIKTALRIIEN 415
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+T D + L AY + + +L M+++ P+K
Sbjct: 416 SDITLDIVFFNCLVDAYGRVGCLAEMWDILDLMKEHRCKPDK 457
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 132/314 (42%), Gaps = 36/314 (11%)
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
LH R A AL F+ M+ KP+I Y L+ + + ++ + LF+ + +
Sbjct: 112 LHDRVAALRWDSALKVFELMRDQVWYKPHIGIYIKLITMLGKCKQPEKAHQLFQAMIDEG 171
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ-CKPDI------------------- 290
AP++ +Y ++ Y ++G +E +L RMK C+PD+
Sbjct: 172 CAPNLQSYTALVSTYSRSGRFREAFDLLDRMKDTPGCQPDVQTYSILIKSCLHAYDFEKV 231
Query: 291 ----------------ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
+T+N LID+YGK F +ME ++ KP + T NS +
Sbjct: 232 KSLLADMARAGIPPNTVTYNTLIDAYGKAGRFAEMESTLLKMLSQNCKPDVWTMNSTLRA 291
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
+G + E ++K A P+ TY ++ YG + + + + K
Sbjct: 292 FGSSGQIETMESCYEKFQASGIVPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWT 351
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
+ T N +++A+ G + + +F + + P+ T + +AY +A + ++ L+
Sbjct: 352 IVTYNVVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVTLCSVVRAYGRAGEVKKIKTALR 411
Query: 455 RMEQNGIVPNKRFF 468
+E + I + FF
Sbjct: 412 IIENSDITLDIVFF 425
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 109/236 (46%), Gaps = 23/236 (9%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
+T Y+ LI GK G+ +M + C+PD N+ + +A
Sbjct: 246 NTVTYNTLIDAYGKAGRFAEMESTLLKMLSQNCKPDVWTMNSTL--------------RA 291
Query: 204 LGYFQKMKGMERC---------KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
G +++ ME C PNI TYNILL + +A+ +++ A+ + + + +
Sbjct: 292 FGSSGQIETMESCYEKFQASGIVPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWT 351
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
I TYN V+DA+G+ G +++ME + MKS + KP+ +T ++ +YG+ K++ +
Sbjct: 352 IVTYNVVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVTLCSVVRAYGRAGEVKKIKTALR 411
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+ +S + FN ++ YG+ + + M + P +T +I +
Sbjct: 412 IIENSDITLDIVFFNCLVDAYGRVGCLAEMWDILDLMKEHRCKPDKVTCTTMIKWF 467
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 183 YNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL 242
YN +I A +A L + F+ MK ER KPN VT ++RA +A V ++
Sbjct: 355 YNVVIDAF----GRAGDLEQMEYIFRLMKS-ERIKPNCVTLCSVVRAYGRAGEVKKIKTA 409
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
+ + S + DI +N ++DAYG+ G + EM +L MK ++CKPD +T +I +
Sbjct: 410 LRIIENSDITLDIVFFNCLVDAYGRVGCLAEMWDILDLMKEHRCKPDKVTCTTMIKWFLI 469
Query: 303 RQAFDKMEQVFKSLMHSKEK 322
+ D Q + L + K
Sbjct: 470 KGIDDHRVQYLRDLKDGRAK 489
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 87/196 (44%), Gaps = 7/196 (3%)
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
KP I + LI GK + +K Q+F++++ P L ++ +++ Y ++ G+
Sbjct: 138 KPHIGIYIKLITMLGKCKQPEKAHQLFQAMIDEGCAPNLQSYTALVSTYSRS---GRFRE 194
Query: 347 VFQKMTAMKYTPS----FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
F + MK TP TY +I + + + + + ++++ G T N ++
Sbjct: 195 AFDLLDRMKDTPGCQPDVQTYSILIKSCLHAYDFEKVKSLLADMARAGIPPNTVTYNTLI 254
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+AY G E + + PD T +A+ + E ++ ++ + +GIV
Sbjct: 255 DAYGKAGRFAEMESTLLKMLSQNCKPDVWTMNSTLRAFGSSGQIETMESCYEKFQASGIV 314
Query: 463 PNKRFFLEALETFSSS 478
PN + + L+++ +
Sbjct: 315 PNIKTYNILLDSYGKA 330
>gi|334185941|ref|NP_190885.5| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|332645523|gb|AEE79044.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 499
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 179/363 (49%), Gaps = 5/363 (1%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
+E K ++W L++F ++KQ WY Y+KL V+G Q A LF M + G
Sbjct: 115 LDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEG 174
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
+P VY +LI+ + K++ L KA + MK + CKP++ T+ +L+ C +
Sbjct: 175 LKPTIDVYTSLISVY----GKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGR 230
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFN 294
D V ++ E+ + TYN ++D YGK GM +EMESVL+ M + PD+ T N
Sbjct: 231 FDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLN 290
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+I SYG + KME + +P + TFN +I+++GKA + K V M
Sbjct: 291 SIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKR 350
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
++ + +TY +I +G + + ++F ++ G T +++ AY GL +
Sbjct: 351 FFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKI 410
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
D + N V D+ + + AY +A +++L +ME+ P+K F ++T
Sbjct: 411 DSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKT 470
Query: 475 FSS 477
+++
Sbjct: 471 YTA 473
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 124/278 (44%), Gaps = 2/278 (0%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
AL F ++ +P TY L + + DQ + LF+ + L P I Y ++
Sbjct: 127 ALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLI 186
Query: 263 DAYGKNGMIKEMESVLSRMKS-NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
YGK+ ++ + S L MKS + CKPD+ TF +LI K FD ++ + + +
Sbjct: 187 SVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGV 246
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT-PSFITYECIITMYGYCDNVSRAR 380
+ T+N++I YGKA + + E V M + P T II YG N+ +
Sbjct: 247 GCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKME 306
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ +G ++T N ++ ++ G+ + + + + + TY ++ + +
Sbjct: 307 SWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETF 366
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
KA E + + ++M+ G+ PN + + +S +
Sbjct: 367 GKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKA 404
>gi|255578090|ref|XP_002529915.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530592|gb|EEF32469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 636
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 181/355 (50%), Gaps = 5/355 (1%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W L+VF +++Q WY +G+Y KLI ++GK Q A LF M + GC Y
Sbjct: 134 RWESALKVFELLREQIWYRPYSGMYIKLIVMLGKCKQPEKAHELFQAMIHEGCDVSHESY 193
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
AL++A+ ++ L KA ++MK C+P++ TY+IL+++C Q D+ L
Sbjct: 194 TALLSAY----GRSGLLDKAFSLLEEMKRNPDCQPDVHTYSILIKSCVQVFAFDKAKTLL 249
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ-CKPDIITFNLLIDSYGK 302
+ ++P+ TYN ++DAYGK M +EME+ L +M S Q C+PD+ T N + ++G
Sbjct: 250 SNMESLGISPNTITYNTLIDAYGKAKMFEEMEATLVKMLSQQNCEPDVWTMNSTLRAFGI 309
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ ME+ ++ + +P++ TFN ++ +YGKA K V + M Y+ + IT
Sbjct: 310 SGQIETMEKCYEKFQGAGIEPSIMTFNVLLDSYGKAGDYKKMSAVMEYMQKYHYSWTIIT 369
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y +I +G ++ + +F + TL +++ AY P + + +
Sbjct: 370 YNIVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAEKPEKIEGVLRFIE 429
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
N +T D+ + L AY + ++ +L MEQ G P+K + ++ +SS
Sbjct: 430 NSDITLDTVFFNCLVDAYGRMGCFAEMKGVLILMEQKGYRPDKITYRTMIKAYSS 484
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 122/276 (44%), Gaps = 39/276 (14%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA-- 201
D YS LI + A L S M + G P+ YN LI A+ KAK
Sbjct: 225 DVHTYSILIKSCVQVFAFDKAKTLLSNMESLGISPNTITYNTLIDAY----GKAKMFEEM 280
Query: 202 ------------------------KALGYFQKMKGMERC---------KPNIVTYNILLR 228
+A G +++ ME+C +P+I+T+N+LL
Sbjct: 281 EATLVKMLSQQNCEPDVWTMNSTLRAFGISGQIETMEKCYEKFQGAGIEPSIMTFNVLLD 340
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
+ +A + +++A+ + + + + I TYN V+DA+G+ G +K+ME + M+S + KP
Sbjct: 341 SYGKAGDYKKMSAVMEYMQKYHYSWTIITYNIVIDAFGRAGDLKQMEYLFRLMRSERIKP 400
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
+T L+ +YG+ + +K+E V + + +S FN ++ YG+ + + V
Sbjct: 401 SCVTLCSLVRAYGQAEKPEKIEGVLRFIENSDITLDTVFFNCLVDAYGRMGCFAEMKGVL 460
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
M Y P ITY +I Y +E+ D
Sbjct: 461 ILMEQKGYRPDKITYRTMIKAYSSKGMTKHVKELQD 496
>gi|293330977|ref|NP_001169349.1| uncharacterized protein LOC100383216 [Zea mays]
gi|30961817|gb|AAP37977.1| PPR2 [Zea mays]
gi|224028857|gb|ACN33504.1| unknown [Zea mays]
gi|414883415|tpg|DAA59429.1| TPA: pentatricopeptide repeat 2 [Zea mays]
Length = 571
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/384 (30%), Positives = 183/384 (47%), Gaps = 54/384 (14%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
S W + L+VF +++Q +Y G Y KLI ++G+ GQ A LF EM GC+P P
Sbjct: 194 SKNWQEALQVFEMLKEQPFYHPKEGTYMKLIVLLGRSGQPTRAHQLFDEMLQQGCQPTPE 253
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
+Y ALI A+ ++ L +AL MK C+P++ TY+ +++AC A D +A
Sbjct: 254 LYTALIGAYC----RSGLLDEALQLLNDMKSSPLCQPDVYTYSTIIKACIDAARFDLTDA 309
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDII--------- 291
++K++ E ++P+ T N V+ YGK G + +ME VLS M S CKPD+
Sbjct: 310 MYKDMAERSISPNTVTQNIVLSGYGKAGRLDDMERVLSDMLDSVSCKPDVWTMNIILSLF 369
Query: 292 --------------------------TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
T N+LI +YGKR+ +DKM V + + T
Sbjct: 370 GNRGEVELMERWYEKFRGYGVEPETRTLNILIGAYGKRRMYDKMSAVMEHMRKLAFPWTT 429
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+N++I + +A G E+ F +M + P T+ C+I D SRA +
Sbjct: 430 ATYNNVIEAFAEAGDAGNMEHAFNQMRSEGMRPDTKTFCCLI------DGFSRAGQFHKV 483
Query: 386 LS--KLGK--DMKVSTL--NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+ KL + D+ V+T NA+L A E + +F + PD+STY +L +A
Sbjct: 484 VGMVKLAERLDVPVNTPFHNAVLGACARADDLVEMERVFRRMKHTQCEPDASTYSILVEA 543
Query: 440 YTKANMKELVQKLLKRMEQNGIVP 463
Y K M + + L E +VP
Sbjct: 544 YRKEGMTDKIYAL--HQENPALVP 565
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 134/304 (44%), Gaps = 2/304 (0%)
Query: 177 RPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
R D + +T L R +K +AL F+ +K P TY L+ ++
Sbjct: 174 RADAKAWACTVTEALADRVSSKNWQEALQVFEMLKEQPFYHPKEGTYMKLIVLLGRSGQP 233
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ-CKPDIITFNL 295
+ + LF E+ + P Y ++ AY ++G++ E +L+ MKS+ C+PD+ T++
Sbjct: 234 TRAHQLFDEMLQQGCQPTPELYTALIGAYCRSGLLDEALQLLNDMKSSPLCQPDVYTYST 293
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM-TAM 354
+I + FD + ++K + P T N ++ YGKA E V M ++
Sbjct: 294 IIKACIDAARFDLTDAMYKDMAERSISPNTVTQNIVLSGYGKAGRLDDMERVLSDMLDSV 353
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P T I++++G V +++ G + + TLN ++ AY + +
Sbjct: 354 SCKPDVWTMNIILSLFGNRGEVELMERWYEKFRGYGVEPETRTLNILIGAYGKRRMYDKM 413
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
+ E+ + ++TY + +A+ +A ++ +M G+ P+ + F ++
Sbjct: 414 SAVMEHMRKLAFPWTTATYNNVIEAFAEAGDAGNMEHAFNQMRSEGMRPDTKTFCCLIDG 473
Query: 475 FSSS 478
FS +
Sbjct: 474 FSRA 477
>gi|75265624|sp|Q9SCP4.1|PP279_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g53170
gi|6630737|emb|CAB64220.1| nodulin / glutamate-ammonia ligase-like protein [Arabidopsis
thaliana]
Length = 447
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 179/363 (49%), Gaps = 5/363 (1%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
+E K ++W L++F ++KQ WY Y+KL V+G Q A LF M + G
Sbjct: 65 LDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEG 124
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
+P VY +LI+ + K++ L KA + MK + CKP++ T+ +L+ C +
Sbjct: 125 LKPTIDVYTSLISVY----GKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGR 180
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFN 294
D V ++ E+ + TYN ++D YGK GM +EMESVL+ M + PD+ T N
Sbjct: 181 FDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLN 240
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+I SYG + KME + +P + TFN +I+++GKA + K V M
Sbjct: 241 SIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKR 300
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
++ + +TY +I +G + + ++F ++ G T +++ AY GL +
Sbjct: 301 FFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKI 360
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
D + N V D+ + + AY +A +++L +ME+ P+K F ++T
Sbjct: 361 DSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKT 420
Query: 475 FSS 477
+++
Sbjct: 421 YTA 423
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 124/278 (44%), Gaps = 2/278 (0%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
AL F ++ +P TY L + + DQ + LF+ + L P I Y ++
Sbjct: 77 ALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLI 136
Query: 263 DAYGKNGMIKEMESVLSRMKS-NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
YGK+ ++ + S L MKS + CKPD+ TF +LI K FD ++ + + +
Sbjct: 137 SVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGV 196
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT-PSFITYECIITMYGYCDNVSRAR 380
+ T+N++I YGKA + + E V M + P T II YG N+ +
Sbjct: 197 GCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKME 256
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ +G ++T N ++ ++ G+ + + + + + TY ++ + +
Sbjct: 257 SWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETF 316
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
KA E + + ++M+ G+ PN + + +S +
Sbjct: 317 GKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKA 354
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 120/250 (48%), Gaps = 13/250 (5%)
Query: 145 TGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG-CRPDPSVYNALITAHLHTRDKAKALAKA 203
T Y+ +I GK G + ++M G PD N++I ++ + R+ K +
Sbjct: 200 TVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRK-MESW 258
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
FQ M +P+I T+NIL+ + +A ++ ++ + + + TYN V++
Sbjct: 259 YSRFQLMG----VQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIE 314
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+GK G I++M+ V +MK KP+ IT+ L+++Y K K++ V + +++S
Sbjct: 315 TFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVL 374
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
P FN +I YG+A + ++ +M K P IT+ +I Y A IF
Sbjct: 375 DTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTY-------TAHGIF 427
Query: 384 DELSKLGKDM 393
D + +L K M
Sbjct: 428 DAVQELEKQM 437
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 90/178 (50%), Gaps = 5/178 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++ LI GK G + + M YN +I T KA + K
Sbjct: 270 DITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVI----ETFGKAGRIEKM 325
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F+KMK + KPN +TY L+ A ++A V +++++ +++ S + D +N +++
Sbjct: 326 DDVFRKMK-YQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIIN 384
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
AYG+ G + M+ + +M+ +CKPD ITF +I +Y FD ++++ K ++ S E
Sbjct: 385 AYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISSGE 442
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 83/178 (46%), Gaps = 6/178 (3%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L GK+ + + V +M+K R++ T Y+ +I GK G+ +F +M+
Sbjct: 276 ILILSFGKAGMYKKMCSVMDFMEK-RFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKY 334
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G +P+ Y +L+ A+ KA + K +++ + + +N ++ A QA
Sbjct: 335 QGVKPNSITYCSLVNAY----SKAGLVVKIDSVLRQIVNSDVV-LDTPFFNCIINAYGQA 389
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
++ + L+ ++ E PD T+ ++ Y +G+ ++ + +M S+ DI+
Sbjct: 390 GDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISSGENLDIL 447
>gi|357458279|ref|XP_003599420.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488468|gb|AES69671.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 511
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 175/358 (48%), Gaps = 5/358 (1%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
K +W L +F ++ Q WY Y+KL+ ++ K Q + A L+ M G +P
Sbjct: 108 KGCQWQNALMIFELLRNQYWYEPRCQTYTKLLMMLSKCKQPKEASQLYETMLFEGLKPTV 167
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
V AL++A+ ++ A + MK + CKP++ TY++L+ CA+ R D +
Sbjct: 168 DVLTALVSAY----GQSGLFRHAFSTIEDMKSVVDCKPDVYTYSVLISCCAKFRRFDLIE 223
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ-CKPDIITFNLLIDS 299
+ ++ S + + TYN ++D YGK GM ++ME+ L+ M N+ C+PD+ T N LI S
Sbjct: 224 RVLADMSYSGIECNSVTYNSIIDGYGKAGMFEQMENSLTDMIENENCQPDVFTLNSLIGS 283
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
YG DKME+ + KP + TFN MI +YGKA + K + V M + P+
Sbjct: 284 YGNGGKIDKMEKWYDEFQLMSIKPDIKTFNMMIKSYGKAGMYDKMKSVMDFMERRFFAPT 343
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
+TY +I +YG + + + F + +G T +++ AY GL + D +
Sbjct: 344 IVTYNTVIEVYGKAGEIEKMDKHFKNMKHIGMKPNSVTYCSLVNAYSKAGLIRKIDSILR 403
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
+ N V D+ + + AY + + + +L M P++ F ++ +++
Sbjct: 404 HVENSDVILDTPFFNCIISAYGQVGDLKKMGELFLAMRARKCEPDRTTFTCMIQAYNT 461
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 1/140 (0%)
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
Y P TY ++ M C A ++++ + G V L A++ AY +GL A
Sbjct: 128 YEPRCQTYTKLLMMLSKCKQPKEASQLYETMLFEGLKPTVDVLTALVSAYGQSGLFRHAF 187
Query: 416 LLFENSHNM-GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
E+ ++ PD TY +L K +L++++L M +GI N + ++
Sbjct: 188 STIEDMKSVVDCKPDVYTYSVLISCCAKFRRFDLIERVLADMSYSGIECNSVTYNSIIDG 247
Query: 475 FSSSLAGSQSGSAKTDLTRS 494
+ + Q ++ TD+ +
Sbjct: 248 YGKAGMFEQMENSLTDMIEN 267
>gi|195616496|gb|ACG30078.1| PPR2 [Zea mays]
Length = 580
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 180/384 (46%), Gaps = 54/384 (14%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
S W + L+VF +++Q +Y G Y KLI ++G+ GQ A LF EM GC+P P
Sbjct: 203 SKNWQEALQVFEMLKEQPFYHPKEGTYMKLIVLLGRSGQPTRAHQLFDEMLQQGCQPTPE 262
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
+Y ALI A+ ++ L +AL MK C+P++ TY+ +++AC A D +A
Sbjct: 263 LYTALIGAYC----RSGLLDEALQLLNDMKSSPLCQPDVYTYSTIIKACVDAARFDLTDA 318
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDII--------- 291
++K++ E ++P+ T N V+ YGK G + +ME VLS M S CKPD+
Sbjct: 319 MYKDMAERSISPNTVTQNIVLSGYGKAGRLDDMERVLSDMLDSVSCKPDVWTMNIILSLF 378
Query: 292 --------------------------TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
T N+LI +YGKR+ +DKM V + + T
Sbjct: 379 GNRGEVELMERWYEKFRGYGVEPETRTLNILIGAYGKRRMYDKMSAVMEHMRKLAFPWTT 438
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+N++I + +A G E+ F +M + P T+ C+I D SRA +
Sbjct: 439 ATYNNVIEAFAEAGDAGNMEHAFNQMRSEGMRPDTKTFCCLI------DGFSRAGQFHKV 492
Query: 386 LS--KLGKDMKVST----LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+ KL + + V NA+L A E + +F + PD+STY +L +A
Sbjct: 493 VGMVKLAERLDVPANTPFHNAVLGACARADDLVEMERVFRRMKHTQCEPDASTYSILVEA 552
Query: 440 YTKANMKELVQKLLKRMEQNGIVP 463
Y K M + + L E +VP
Sbjct: 553 YRKEGMTDKIYAL--HQENPALVP 574
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 134/305 (43%), Gaps = 2/305 (0%)
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
R D + +T L R +K +AL F+ +K P TY L+ ++
Sbjct: 182 ARADAKAWACTVTEALADRVSSKNWQEALQVFEMLKEQPFYHPKEGTYMKLIVLLGRSGQ 241
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ-CKPDIITFN 294
+ + LF E+ + P Y ++ AY ++G++ E +L+ MKS+ C+PD+ T++
Sbjct: 242 PTRAHQLFDEMLQQGCQPTPELYTALIGAYCRSGLLDEALQLLNDMKSSPLCQPDVYTYS 301
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM-TA 353
+I + FD + ++K + P T N ++ YGKA E V M +
Sbjct: 302 TIIKACVDAARFDLTDAMYKDMAERSISPNTVTQNIVLSGYGKAGRLDDMERVLSDMLDS 361
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
+ P T I++++G V +++ G + + TLN ++ AY + +
Sbjct: 362 VSCKPDVWTMNIILSLFGNRGEVELMERWYEKFRGYGVEPETRTLNILIGAYGKRRMYDK 421
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
+ E+ + ++TY + +A+ +A ++ +M G+ P+ + F ++
Sbjct: 422 MSAVMEHMRKLAFPWTTATYNNVIEAFAEAGDAGNMEHAFNQMRSEGMRPDTKTFCCLID 481
Query: 474 TFSSS 478
FS +
Sbjct: 482 GFSRA 486
>gi|242037185|ref|XP_002465987.1| hypothetical protein SORBIDRAFT_01g049600 [Sorghum bicolor]
gi|241919841|gb|EER92985.1| hypothetical protein SORBIDRAFT_01g049600 [Sorghum bicolor]
Length = 480
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 180/355 (50%), Gaps = 5/355 (1%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W LE+F ++KQ WY + Y++L+ ++GK Q A LF M + RP VY
Sbjct: 105 RWESALEIFELLRKQHWYEPRSQTYARLLMMLGKCRQPGPAAALFKAMLSERLRPTADVY 164
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
AL+ A+ ++ L +AL ++MKG CKP+ T+++L+ CA++R D + A+
Sbjct: 165 TALVGAYGYS----GLLDEALAAVEQMKGAADCKPDGYTFSVLINCCAKSRRFDLIPAVL 220
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGK 302
E+ + + +N ++D YGK M +EME LS M +S PDI T N +I +YG
Sbjct: 221 DEMSYLGIECNSVIHNAIIDGYGKAAMFEEMEGALSAMLESGSNVPDIYTMNSVIGAYGN 280
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
D+ME+ + +P TFN MI +YGKA + K +F+ M ++P+ +T
Sbjct: 281 HGRTDEMEKSYSEFQLMGVEPDTKTFNIMIKSYGKAGMYDKMMSIFRYMKKRFFSPTAVT 340
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
+ +I +G N+ + F + G T +++ Y GL + + +
Sbjct: 341 FNTVIECFGRAGNIEKMEYYFRLMKIQGVKPNPITYCSLVNGYSKAGLLDKVPGIIRQTE 400
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
N V D+ + + AY K+ ++++++L+ M++ P+K + ++ +++
Sbjct: 401 NTNVVLDTPFFNCVISAYAKSGDIKIMEEMLQLMKEKKCKPDKITYATMIQAYTA 455
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 130/330 (39%), Gaps = 40/330 (12%)
Query: 189 AHLHTRDKAKALAK---ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
A L D A A + AL F+ ++ +P TY LL + R ALFK
Sbjct: 92 AVLEALDSAVAACRWESALEIFELLRKQHWYEPRSQTYARLLMMLGKCRQPGPAAALFKA 151
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK-SNQCKPDIITF----------- 293
+ L P Y ++ AYG +G++ E + + +MK + CKPD TF
Sbjct: 152 MLSERLRPTADVYTALVGAYGYSGLLDEALAAVEQMKGAADCKPDGYTFSVLINCCAKSR 211
Query: 294 ------------------------NLLIDSYGKRQAFDKMEQVFKSLMHSKEK-PTLPTF 328
N +ID YGK F++ME +++ S P + T
Sbjct: 212 RFDLIPAVLDEMSYLGIECNSVIHNAIIDGYGKAAMFEEMEGALSAMLESGSNVPDIYTM 271
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
NS+I YG + E + + M P T+ +I YG + IF + K
Sbjct: 272 NSVIGAYGNHGRTDEMEKSYSEFQLMGVEPDTKTFNIMIKSYGKAGMYDKMMSIFRYMKK 331
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
T N ++E + G + + F GV P+ TY L Y+KA + +
Sbjct: 332 RFFSPTAVTFNTVIECFGRAGNIEKMEYYFRLMKIQGVKPNPITYCSLVNGYSKAGLLDK 391
Query: 449 VQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
V ++++ E +V + FF + ++ S
Sbjct: 392 VPGIIRQTENTNVVLDTPFFNCVISAYAKS 421
>gi|242047208|ref|XP_002461350.1| hypothetical protein SORBIDRAFT_02g001400 [Sorghum bicolor]
gi|241924727|gb|EER97871.1| hypothetical protein SORBIDRAFT_02g001400 [Sorghum bicolor]
Length = 560
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 177/378 (46%), Gaps = 42/378 (11%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
S W + L+VF +++Q +Y G + KLI ++G+ GQ A LF EM GC+P P
Sbjct: 183 SKNWQEALQVFEMLKEQPFYHPKEGTFMKLIVLLGRSGQPARAHQLFDEMLQQGCQPTPG 242
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
+Y ALI A+ ++ L AL MKG C+P++ TY+ +++AC A D ++
Sbjct: 243 LYTALIGAYC----RSGLLDDALQLLNDMKGSPLCQPDVYTYSTIIKACVDATRFDLIDV 298
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSY 300
++K++ E +AP+ T N V+ YGK G + +ME VLS M S CKPD+ T N+++ +
Sbjct: 299 MYKDMAERSIAPNTVTQNIVLSGYGKAGRLDDMEKVLSDMLDSTACKPDVWTMNIILSLF 358
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
G + + ME+ ++ +P T N +I YGK R+ K V + M + + +
Sbjct: 359 GNKGQVELMEKWYEKFRSYGIEPETRTLNILIGAYGKKRMYDKMSAVMEYMRKLAFPWTT 418
Query: 361 ITYECIITMYGYCDNVSRAREIFDEL-------------------SKLGKDMKVSTL--- 398
TY +I + + F+++ SK G+ KV +
Sbjct: 419 ATYNNVIEAFAEAGDAKNMEHTFNQMRSEGMKPDTKTFCCLINGFSKAGQFHKVVGMVKL 478
Query: 399 -------------NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
NA+L A E + +F + + PD+ TY +L +AY K M
Sbjct: 479 AERLDVPANTSFHNAILGACARADDLMEMERVFRHMKHTQCDPDAVTYSILVEAYRKEGM 538
Query: 446 KELVQKLLKRMEQNGIVP 463
+ + L E +VP
Sbjct: 539 TDKIYAL--HQENPALVP 554
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 135/306 (44%), Gaps = 6/306 (1%)
Query: 177 RPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
R + + +T L R +K +AL F+ +K P T+ L+ ++
Sbjct: 163 RAEAKAWACTVTEALADRVTSKNWQEALQVFEMLKEQPFYHPKEGTFMKLIVLLGRSGQP 222
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ-CKPDIITFNL 295
+ + LF E+ + P Y ++ AY ++G++ + +L+ MK + C+PD+ T++
Sbjct: 223 ARAHQLFDEMLQQGCQPTPGLYTALIGAYCRSGLLDDALQLLNDMKGSPLCQPDVYTYST 282
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM---T 352
+I + FD ++ ++K + P T N ++ YGKA E V M T
Sbjct: 283 IIKACVDATRFDLIDVMYKDMAERSIAPNTVTQNIVLSGYGKAGRLDDMEKVLSDMLDST 342
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
A K P T I++++G V + +++ G + + TLN ++ AY +
Sbjct: 343 ACK--PDVWTMNIILSLFGNKGQVELMEKWYEKFRSYGIEPETRTLNILIGAYGKKRMYD 400
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
+ + E + ++TY + +A+ +A + ++ +M G+ P+ + F +
Sbjct: 401 KMSAVMEYMRKLAFPWTTATYNNVIEAFAEAGDAKNMEHTFNQMRSEGMKPDTKTFCCLI 460
Query: 473 ETFSSS 478
FS +
Sbjct: 461 NGFSKA 466
>gi|226500056|ref|NP_001147821.1| pentatricopeptide repeat 2 [Zea mays]
gi|195613946|gb|ACG28803.1| PPR2 [Zea mays]
Length = 562
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 117/384 (30%), Positives = 182/384 (47%), Gaps = 54/384 (14%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
S W + L+VF +++Q +Y G Y KLI ++G+ GQ A LF EM GC+P P
Sbjct: 185 SKNWQEALQVFEMLKEQPFYHPKEGTYMKLIVLLGRSGQPTRAHQLFDEMLQQGCQPTPE 244
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
+Y ALI A+ ++ L +AL MK C+P++ TY+ +++AC A D +
Sbjct: 245 LYTALIGAYC----RSCLLDEALQLLNDMKSSPLCQPDVYTYSTIIKACVDAARFDLTDT 300
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDII--------- 291
++K++ E ++P+ T N V+ YGK G + +ME VLS M S CKPD+
Sbjct: 301 MYKDMAERSISPNTVTQNIVLSGYGKAGRLDDMERVLSDMLDSVSCKPDVWTMNIILSLF 360
Query: 292 --------------------------TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
T N+LI +YGKR+ +DKM V + + T
Sbjct: 361 GNRGEVELMERWYEKFRGYGVEPETRTLNILIGAYGKRRMYDKMSAVMEHMRKLAFPWTT 420
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+N++I + +A G E+ F +M + P T+ C+I D SRA +
Sbjct: 421 ATYNNVIEAFAEAGDAGNMEHAFNQMRSEGMRPDTKTFCCLI------DGFSRAGQFHKV 474
Query: 386 LS--KLGK--DMKVSTL--NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+ KL + D+ V+T NA+L A E + +F + PD+STY +L +A
Sbjct: 475 VGMVKLAERLDVPVNTPFHNAVLGACARADDLVEMERVFRRMKHTQCEPDASTYSILVEA 534
Query: 440 YTKANMKELVQKLLKRMEQNGIVP 463
Y K M + + L E +VP
Sbjct: 535 YRKEGMTDKIYAL--HQENPALVP 556
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 133/304 (43%), Gaps = 2/304 (0%)
Query: 177 RPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
R D + +T L R +K +AL F+ +K P TY L+ ++
Sbjct: 165 RADAKAWACTVTEALADRVSSKNWQEALQVFEMLKEQPFYHPKEGTYMKLIVLLGRSGQP 224
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ-CKPDIITFNL 295
+ + LF E+ + P Y ++ AY ++ ++ E +L+ MKS+ C+PD+ T++
Sbjct: 225 TRAHQLFDEMLQQGCQPTPELYTALIGAYCRSCLLDEALQLLNDMKSSPLCQPDVYTYST 284
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM-TAM 354
+I + FD + ++K + P T N ++ YGKA E V M ++
Sbjct: 285 IIKACVDAARFDLTDTMYKDMAERSISPNTVTQNIVLSGYGKAGRLDDMERVLSDMLDSV 344
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P T I++++G V +++ G + + TLN ++ AY + +
Sbjct: 345 SCKPDVWTMNIILSLFGNRGEVELMERWYEKFRGYGVEPETRTLNILIGAYGKRRMYDKM 404
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
+ E+ + ++TY + +A+ +A ++ +M G+ P+ + F ++
Sbjct: 405 SAVMEHMRKLAFPWTTATYNNVIEAFAEAGDAGNMEHAFNQMRSEGMRPDTKTFCCLIDG 464
Query: 475 FSSS 478
FS +
Sbjct: 465 FSRA 468
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 183/366 (50%), Gaps = 6/366 (1%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
L+F+E + W + L +F++MQ+Q W + IY+ +I+++G++G + +F EM
Sbjct: 111 LVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKSTEIFEEMPT 170
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G Y ALI ++ + +L ++MK E+ P+I+TYN ++ +CA+
Sbjct: 171 HGVPRSVFSYTALINSY----GRHGQYEVSLELLERMK-KEKVTPSILTYNTVINSCARG 225
Query: 234 R-NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
N + + +LF E+ + PDI TYN +++A G+ E E V M PDI T
Sbjct: 226 GLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITT 285
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+ L++++GK +K+ ++ K + S P + ++N ++ Y A VF++M
Sbjct: 286 YRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQ 345
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ P+ +TY ++ +YG RE+F E+ + V T N ++E + G
Sbjct: 346 EARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFK 405
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
E LF + V P+ TY+ L A K + E +K+L M++ GIVP+ + + +
Sbjct: 406 EVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVI 465
Query: 473 ETFSSS 478
E + +
Sbjct: 466 EAYGQA 471
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 155/337 (45%), Gaps = 12/337 (3%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VFR M + + D Y L+ GK + L EM +SG PD S YN L+ A+
Sbjct: 270 VFRTMNEGG-MVPDITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAY 328
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
D + A+G F++M+ RC PN VTY++LL D V LF E+ S
Sbjct: 329 ASKGD----IRHAMGVFRQMQ-EARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSN 383
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
PD+ TYN +++ +G+ G KE+ ++ M +P++ T+ LI + GK + +
Sbjct: 384 TEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAK 443
Query: 311 QVFKSLMHSKEKPTLPT---FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
++ L+H EK +P+ + +I YG+A +A +F M M P+ TY +I
Sbjct: 444 KI---LLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLI 500
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
M+ + I ++ + G + N ++E Y G EA +
Sbjct: 501 NMFARGGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQ 560
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
PD T++ + Y A + + ++ + + +GI+P+
Sbjct: 561 PDERTFEAVLSVYCTAGLVDESEEQFREIRASGILPS 597
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 172/377 (45%), Gaps = 11/377 (2%)
Query: 88 RSFSDKEPLV-RTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTG 146
R D+ +V RT+N+ V L E GK +K + E+ + M+ + D
Sbjct: 261 RGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESSG-NLPDIS 319
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL-HTR-DKAKALAKAL 204
Y+ L+ KG R AM +F +M+ + C P+ Y+ L+ + H R D + L
Sbjct: 320 SYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVREL---- 375
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
F +MK + +P++ TYN+L+ + +V LF ++ E + P++ TY G++ A
Sbjct: 376 --FLEMK-VSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYA 432
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
GK G+ ++ + +L M P + +I++YG+ ++++ +F ++ KPT
Sbjct: 433 CGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPT 492
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ T+NS+I + + L ++E + KM ++ +I Y A + +
Sbjct: 493 VETYNSLINMFARGGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYV 552
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
EL K T A+L YC GL E++ F G+ P Y ++ Y ++N
Sbjct: 553 ELEKARFQPDERTFEAVLSVYCTAGLVDESEEQFREIRASGILPSVMCYCMMIAVYARSN 612
Query: 445 MKELVQKLLKRMEQNGI 461
+ ++L M N +
Sbjct: 613 RWDDAYEVLDEMVTNKV 629
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 135/326 (41%), Gaps = 49/326 (15%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA----HLHTRDKAKA 199
D G Y+ LI V G+ G + + LF +M P+ Y LI A LH
Sbjct: 387 DVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHED----- 441
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
AK + KG+ P+ Y ++ A QA + ++ +F ++E P + TYN
Sbjct: 442 -AKKILLHMDEKGI---VPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYN 497
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
+++ + + G+ KE E+++ +M + D +FN +I+ Y + F++ + + L +
Sbjct: 498 SLINMFARGGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKA 557
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
+ +P TF +++ Y A L ++E F+++ A PS + Y +I +Y + A
Sbjct: 558 RFQPDERTFEAVLSVYCTAGLVDESEEQFREIRASGILPSVMCYCMMIAVYARSNRWDDA 617
Query: 380 REI------------------------------------FDELSKLGKDMKVSTLNAMLE 403
E+ FD+L+ G + + N +LE
Sbjct: 618 YEVLDEMVTNKVSNIHQVVGKMMKGDYDDYSNWQMVEYVFDKLNSEGCGLGMRFYNTLLE 677
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPD 429
A G A + + G+ P+
Sbjct: 678 ALWWLGQKERAARVLSEAIKRGLFPE 703
>gi|242092154|ref|XP_002436567.1| hypothetical protein SORBIDRAFT_10g004910 [Sorghum bicolor]
gi|241914790|gb|EER87934.1| hypothetical protein SORBIDRAFT_10g004910 [Sorghum bicolor]
Length = 492
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 170/342 (49%), Gaps = 4/342 (1%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W L+VF M+ Q WY GIY KLI ++GK + A LF M + GC P+ Y
Sbjct: 120 RWDSALKVFELMRDQVWYRPYIGIYIKLITMLGKCKKPEKAHELFQAMIDEGCAPNLESY 179
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
AL++A+ ++ +A +MK C+P++ TY+IL+++C A + ++V +L
Sbjct: 180 TALVSAY----SRSGRFHEAFNLLDRMKDTPGCQPDVKTYSILIKSCLHAYDFEKVKSLL 235
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR 303
++ + + P+ TYN ++DAYGK EMES L +M S CKPDI T N + ++G
Sbjct: 236 TDMARAGIRPNTVTYNTLIDAYGKARRFPEMESTLLKMLSQNCKPDIWTMNSTLRAFGSS 295
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
+ ME ++ S P + T+N ++ +YGKA++ K V + M Y+ + +TY
Sbjct: 296 GQIETMESCYEKFQASGIVPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTY 355
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+I +G ++ + IF + TL +++ AY G + + N
Sbjct: 356 NVVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVTLCSVVRAYGRAGEVKKIKTVLRIVEN 415
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+T D + L AY + + +L M+++ P+K
Sbjct: 416 SDITLDIVFFNCLVDAYGRVGCLAEMWDILDLMKEHRCKPDK 457
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 107/234 (45%), Gaps = 30/234 (12%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRD---------------------KAKALAKALG 205
L ++M +G RP+ YN LI A+ R + +A G
Sbjct: 234 LLTDMARAGIRPNTVTYNTLIDAYGKARRFPEMESTLLKMLSQNCKPDIWTMNSTLRAFG 293
Query: 206 YFQKMKGMERC---------KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+++ ME C PNI TYNILL + +A+ +++ A+ + + + + I
Sbjct: 294 SSGQIETMESCYEKFQASGIVPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIV 353
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TYN V+DA+G+ G +++ME + MKS + KP+ +T ++ +YG+ K++ V + +
Sbjct: 354 TYNVVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVTLCSVVRAYGRAGEVKKIKTVLRIV 413
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+S + FN ++ YG+ + + M + P +T +I +
Sbjct: 414 ENSDITLDIVFFNCLVDAYGRVGCLAEMWDILDLMKEHRCKPDKVTCATMIKWF 467
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 90/198 (45%), Gaps = 11/198 (5%)
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
+P I + LI GK + +K ++F++++ P L ++ +++ Y ++ G+
Sbjct: 138 RPYIGIYIKLITMLGKCKKPEKAHELFQAMIDEGCAPNLESYTALVSAYSRS---GRFHE 194
Query: 347 VFQKMTAMKYTPS----FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
F + MK TP TY +I + + + + + ++++ G T N ++
Sbjct: 195 AFNLLDRMKDTPGCQPDVKTYSILIKSCLHAYDFEKVKSLLTDMARAGIRPNTVTYNTLI 254
Query: 403 EAYC-MNGLP-TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+AY P E+ LL S N PD T +A+ + E ++ ++ + +G
Sbjct: 255 DAYGKARRFPEMESTLLKMLSQN--CKPDIWTMNSTLRAFGSSGQIETMESCYEKFQASG 312
Query: 461 IVPNKRFFLEALETFSSS 478
IVPN + + L+++ +
Sbjct: 313 IVPNIKTYNILLDSYGKA 330
>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74850, chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
Length = 862
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 200/411 (48%), Gaps = 9/411 (2%)
Query: 69 KRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQC 128
++G+ S ++ES L+ L S + + R L+ + + L+F+E W +
Sbjct: 68 EKGKYSYDVES--LINKL-SSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRS 124
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L +F++MQ+Q W + IY+ +I+++G++G + +F EM + G Y ALI
Sbjct: 125 LRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALIN 184
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR-NVDQVNALFKELH 247
A+ + +L +MK E+ P+I+TYN ++ ACA+ + + + LF E+
Sbjct: 185 AY----GRNGRYETSLELLDRMKN-EKISPSILTYNTVINACARGGLDWEGLLGLFAEMR 239
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
+ PDI TYN ++ A G+ E E V M PD+ T++ L++++GK + +
Sbjct: 240 HEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLE 299
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
K+ + + P + ++N ++ Y K+ +A VF +M A TP+ TY ++
Sbjct: 300 KVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL 359
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
++G R++F E+ D +T N ++E + G E LF + +
Sbjct: 360 NLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIE 419
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
PD TY+ + A K + E +K+L+ M N IVP+ + + +E F +
Sbjct: 420 PDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQA 470
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 162/352 (46%), Gaps = 6/352 (1%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
W L +F M + D Y+ L++ +G A +F M + G PD + Y+
Sbjct: 228 WEGLLGLFAEM-RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYS 286
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
L+ T K + L K +M P+I +YN+LL A A++ ++ + +F
Sbjct: 287 HLV----ETFGKLRRLEKVCDLLGEMASGGSL-PDITSYNVLLEAYAKSGSIKEAMGVFH 341
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
++ + P+ TY+ +++ +G++G ++ + MKS+ PD T+N+LI+ +G+
Sbjct: 342 QMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGG 401
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
F ++ +F ++ +P + T+ +I GK L A + Q MTA PS Y
Sbjct: 402 YFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYT 461
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
+I +G A F+ + ++G + + T +++L ++ GL E++ + +
Sbjct: 462 GVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDS 521
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
G+ + T+ +AY + E K ME++ P++R L +S
Sbjct: 522 GIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYS 573
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 150/333 (45%), Gaps = 6/333 (1%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VFR M + D YS L+ GK + L EM + G PD + YN L+ A+
Sbjct: 269 VFRTMNDGG-IVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAY 327
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
K+ ++ +A+G F +M+ C PN TY++LL Q+ D V LF E+ S
Sbjct: 328 A----KSGSIKEAMGVFHQMQAA-GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 382
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
PD TYN +++ +G+ G KE+ ++ M +PD+ T+ +I + GK +
Sbjct: 383 TDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDAR 442
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
++ + + + P+ + +I +G+A L +A F M + PS T+ ++ +
Sbjct: 443 KILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSF 502
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
V + I L G T NA +EAY G EA + + PD
Sbjct: 503 ARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDE 562
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
T + + Y+ A + + ++ + M+ + I+P
Sbjct: 563 RTLEAVLSVYSFARLVDECREQFEEMKASDILP 595
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 162/376 (43%), Gaps = 11/376 (2%)
Query: 87 MRSFSDKEPLV-RTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADT 145
+R D+ +V RT+N V L E GK + + ++ M + D
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGG-SLPDI 317
Query: 146 GIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKA 203
Y+ L+ K G + AM +F +M+ +GC P+ + Y+ L+ + D + L
Sbjct: 318 TSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL--- 374
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F +MK P+ TYNIL+ + +V LF ++ E + PD+ TY G++
Sbjct: 375 ---FLEMKS-SNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIF 430
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
A GK G+ ++ +L M +N P + +I+++G+ +++ F ++ P
Sbjct: 431 ACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNP 490
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
++ TF+S++ ++ + L ++E + ++ + T+ I Y A + +
Sbjct: 491 SIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTY 550
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
++ K D TL A+L Y L E FE + P Y ++ Y K
Sbjct: 551 VDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKT 610
Query: 444 NMKELVQKLLKRMEQN 459
+ V +LL+ M N
Sbjct: 611 ERWDDVNELLEEMLSN 626
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 143/352 (40%), Gaps = 42/352 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L G+S ++ ++F M+ D Y+ LI V G+ G + + LF +M
Sbjct: 357 VLLNLFGQSGRYDDVRQLFLEMKSSN-TDPDAATYNILIEVFGEGGYFKEVVTLFHDMVE 415
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
PD Y +I A K A Q M + P+ Y ++ A QA
Sbjct: 416 ENIEPDMETYEGIIFAC----GKGGLHEDARKILQYMTAND-IVPSSKAYTGVIEAFGQA 470
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
++ F +HE P I T++ ++ ++ + G++KE E++LSR+ + + TF
Sbjct: 471 ALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTF 530
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N I++Y + F++ + + + S+ P T +++ Y ARL + F++M A
Sbjct: 531 NAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKA 590
Query: 354 MKYTPSFITYECIITMYGYC---DNVSRARE----------------------------- 381
PS + Y ++ +YG D+V+ E
Sbjct: 591 SDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQ 650
Query: 382 ----IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
+ D+L+ G + + NA+L+A G A + + G+ P+
Sbjct: 651 IVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPE 702
>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
Length = 863
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 200/411 (48%), Gaps = 9/411 (2%)
Query: 69 KRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQC 128
++G+ S ++ES L+ L S + + R L+ + + L+F+E W +
Sbjct: 68 EKGKYSYDVES--LINKL-SSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRS 124
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L +F++MQ+Q W + IY+ +I+++G++G + +F EM + G Y ALI
Sbjct: 125 LRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALIN 184
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR-NVDQVNALFKELH 247
A+ + +L +MK ++ P+I+TYN ++ ACA+ + + + LF E+
Sbjct: 185 AY----GRNGRYETSLELLDRMKN-DKISPSILTYNTVINACARGGLDWEGLLGLFAEMR 239
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
+ PDI TYN ++ A G+ E E V M PD+ T++ L++++GK + +
Sbjct: 240 HEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLE 299
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
K+ + + P + ++N ++ Y K+ +A VF +M A TP+ TY ++
Sbjct: 300 KVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL 359
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
++G R++F E+ D +T N ++E + G E LF + +
Sbjct: 360 NLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIE 419
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
PD TY+ + A K + E +K+L+ M N IVP+ + + +E F +
Sbjct: 420 PDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQA 470
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 151/333 (45%), Gaps = 6/333 (1%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VFR M + D YS L+ GK + L SEM + G PD + YN L+ A+
Sbjct: 269 VFRTMNDGG-IVPDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAY 327
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
K+ ++ +A+G F +M+ C PN TY++LL Q+ D V LF E+ S
Sbjct: 328 A----KSGSIKEAMGVFHQMQAA-GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 382
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
PD TYN +++ +G+ G KE+ ++ M +PD+ T+ +I + GK +
Sbjct: 383 TDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDAR 442
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
++ + + + P+ + +I +G+A L +A F M + PS TY ++ +
Sbjct: 443 KILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSF 502
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
V + I L G T NA +EAY G EA + + PD
Sbjct: 503 ARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDE 562
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
T + + Y+ A + + ++ + M+ + I+P
Sbjct: 563 RTLEAVLSVYSFARLVDECREQFEEMKASDILP 595
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 162/352 (46%), Gaps = 6/352 (1%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
W L +F M + D Y+ L++ +G A +F M + G PD + Y+
Sbjct: 228 WEGLLGLFAEM-RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYS 286
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
L+ T K + L K +M P+I +YN+LL A A++ ++ + +F
Sbjct: 287 HLV----ETFGKLRRLEKVSDLLSEMASGGSL-PDITSYNVLLEAYAKSGSIKEAMGVFH 341
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
++ + P+ TY+ +++ +G++G ++ + MKS+ PD T+N+LI+ +G+
Sbjct: 342 QMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGG 401
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
F ++ +F ++ +P + T+ +I GK L A + Q MTA PS Y
Sbjct: 402 YFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYT 461
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
+I +G A F+ + ++G + + T +++L ++ GL E++ + +
Sbjct: 462 GVIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGLVKESEAILSRLVDS 521
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
G+ + T+ +AY + E K ME++ P++R L +S
Sbjct: 522 GIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYS 573
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 142/320 (44%), Gaps = 9/320 (2%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKA 199
+ D Y+ L+ K G + AM +F +M+ +GC P+ + Y+ L+ + D +
Sbjct: 314 LPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQ 373
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L F +MK P+ TYNIL+ + +V LF ++ E + PD+ TY
Sbjct: 374 L------FLEMKS-SNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYE 426
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
G++ A GK G+ ++ +L M +N P + +I+++G+ +++ F ++
Sbjct: 427 GIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEV 486
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
P++ T++S++ ++ + L ++E + ++ + T+ I Y A
Sbjct: 487 GSNPSIETYHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEA 546
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+ + ++ K D TL A+L Y L E FE + P Y ++
Sbjct: 547 VKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAV 606
Query: 440 YTKANMKELVQKLLKRMEQN 459
Y K + V +LL+ M N
Sbjct: 607 YGKTERWDDVNELLEEMLSN 626
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 143/352 (40%), Gaps = 42/352 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L G+S ++ ++F M+ D Y+ LI V G+ G + + LF +M
Sbjct: 357 VLLNLFGQSGRYDDVRQLFLEMKSSN-TDPDAATYNILIEVFGEGGYFKEVVTLFHDMVE 415
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
PD Y +I A K A Q M + P+ Y ++ A QA
Sbjct: 416 ENIEPDMETYEGIIFAC----GKGGLHEDARKILQYMTAND-IVPSSKAYTGVIEAFGQA 470
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
++ F +HE P I TY+ ++ ++ + G++KE E++LSR+ + + TF
Sbjct: 471 ALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTF 530
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N I++Y + F++ + + + S+ P T +++ Y ARL + F++M A
Sbjct: 531 NAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKA 590
Query: 354 MKYTPSFITYECIITMYGYC---DNVSRARE----------------------------- 381
PS + Y ++ +YG D+V+ E
Sbjct: 591 SDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQ 650
Query: 382 ----IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
+ D+L+ G + + NA+L+A G A + + G+ P+
Sbjct: 651 IVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPE 702
>gi|414864365|tpg|DAA42922.1| TPA: hypothetical protein ZEAMMB73_846849 [Zea mays]
Length = 485
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 180/355 (50%), Gaps = 5/355 (1%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W LE+F ++KQ WY + Y++L+ ++GK Q A LF EM + RP VY
Sbjct: 104 RWESALEIFELLRKQHWYEPRSQTYARLLMMLGKCRQPGPAAGLFREMLSERLRPTADVY 163
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
ALI A+ ++ L AL ++MKG CKP+ T+++L+ CA++R D + A+
Sbjct: 164 TALIGAYGYS----GLLEHALAAVEQMKGAADCKPDGYTFSVLVDCCAKSRRFDLIPAVL 219
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGK 302
E+ + + +N ++D YGK M +EME LS M +S PDI T N ++ +YG
Sbjct: 220 DEMSYLGIECNSVIHNAIIDGYGKAAMFEEMEGALSTMLESGSNVPDIYTMNSVVGAYGN 279
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
D+ME+ + +P TFN MI +YGKA + K +F+ M ++P+ +T
Sbjct: 280 HGRTDEMEKSYSEFQLMGVEPDTKTFNIMIRSYGKAGMYVKMMSIFRYMKKRFFSPTAVT 339
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
+ +I +G ++ + F + G T +++ Y GL + + +
Sbjct: 340 FNTVIECFGRAGDIEKMEYYFRLMKIQGVKPNPITYCSLVNGYSKAGLLDKVAGVIRQTE 399
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
N V D+ + + AY K+ ++++++L+ M++ P++ + ++ +++
Sbjct: 400 NTNVVLDTPFFNCVISAYAKSGDIKIMEEMLQLMKEKRCKPDRITYATMIQAYTA 454
>gi|224112076|ref|XP_002316075.1| predicted protein [Populus trichocarpa]
gi|222865115|gb|EEF02246.1| predicted protein [Populus trichocarpa]
Length = 434
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 176/353 (49%), Gaps = 5/353 (1%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+WLQ ++VF +++Q +Y Y KL+ ++G+ GQ + A LF EM G P +Y
Sbjct: 66 QWLQAIQVFEMLKEQPFYQPKEATYMKLLVLLGRCGQPQRAHQLFDEMVEEGIEPTTELY 125
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
AL+ A+ + + + +MK + RC+P++ TY+ LL+AC A + ++ L+
Sbjct: 126 TALLAAYC----RNNLIDEGFSIINQMKSLPRCQPDVYTYSTLLKACVDASRFELIDTLY 181
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGK 302
+E+ E +++P+ T N V+ YG+ GM +ME VLS M +S CKPD+ T N+++ +G
Sbjct: 182 QEMDERLISPNTVTQNVVLSGYGRVGMYDQMERVLSEMLESAACKPDVWTMNIILSVFGN 241
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
D ME+ ++ + +P TFN +I YGK R+ K V + M +++ + T
Sbjct: 242 EGQIDLMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKVQFPWTTST 301
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y +I + + FD++ T ++ Y GL + + +
Sbjct: 302 YNNVIEAFADVGDAKNMEYAFDQMRAESMKADTKTFCCLINGYANAGLFHKVISSVQLAA 361
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ ++S + + A KA+ ++++ KRM+ P+ R + +E +
Sbjct: 362 KFEIPENTSFFNAVISACAKADDLMEMERVFKRMKDKQCPPDSRTYSIMVEAY 414
>gi|168016406|ref|XP_001760740.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688100|gb|EDQ74479.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 466
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 169/356 (47%), Gaps = 5/356 (1%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
K ++W L VF ++ Q WY A+ Y KL+ ++ + Q + A LF + RP
Sbjct: 96 KQNEWESALRVFELVRIQEWYTAEVSTYVKLLTMLARVKQPQAASNLFDFLLQDKLRPTL 155
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
++ ALIT K+ L KA F++M+ + C P+ Y +++ C A DQ
Sbjct: 156 EIFTALITVF----TKSNLLKKAFEVFEQMRLFDGCLPDKYAYTTMIKGCCDAGLYDQAK 211
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
LF E+ + P I TYN ++ YGK G+ E+E +LS M++N PD IT+N LI +
Sbjct: 212 KLFNEMMREGVEPTIVTYNTLIFGYGKAGLFAEIEYLLSLMEANGITPDTITWNTLIRVF 271
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
G +MEQ ++ L+ T NS+I YG+A L GK E V M Y +
Sbjct: 272 GLHNRIPEMEQAYEGLLAQGLMADEVTLNSLIGTYGRAGLYGKMECVTDFMRRYSYPMTT 331
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
+TY II +YG + + F + G T +++L AY +G + + +
Sbjct: 332 VTYNIIIEIYGKARKIEQMDTAFKRMKAQGLKPNCITFSSILSAYGKHGEWHKIEKIMRQ 391
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+ D++ Y A+ +A E ++KL + M+ G+ P+ + +E +
Sbjct: 392 VRHYNAA-DTAVYNAAIDAHRRALDFEAMEKLFEEMKMEGVAPDGITYTTLIEAYG 446
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 123/305 (40%), Gaps = 39/305 (12%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
KS+ + EVF M+ + D Y+ +I G A LF+EM G P
Sbjct: 167 KSNLLKKAFEVFEQMRLFDGCLPDKYAYTTMIKGCCDAGLYDQAKKLFNEMMREGVEPTI 226
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
YN LI + KA A+ + Y + P+ +T+N L+R + ++
Sbjct: 227 VTYNTLIFGY----GKAGLFAE-IEYLLSLMEANGITPDTITWNTLIRVFGLHNRIPEME 281
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
++ L L D T N ++ YG+ G+ +ME V M+ +T+N++I+ Y
Sbjct: 282 QAYEGLLAQGLMADEVTLNSLIGTYGRAGLYGKMECVTDFMRRYSYPMTTVTYNIIIEIY 341
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV------------- 347
GK + ++M+ FK + KP TF+S++ YGK K E +
Sbjct: 342 GKARKIEQMDTAFKRMKAQGLKPNCITFSSILSAYGKHGEWHKIEKIMRQVRHYNAADTA 401
Query: 348 ---------------------FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
F++M P ITY +I YG + +ARE+ +E
Sbjct: 402 VYNAAIDAHRRALDFEAMEKLFEEMKMEGVAPDGITYTTLIEAYGRVRKLQKARELQEEW 461
Query: 387 SKLGK 391
L K
Sbjct: 462 DALKK 466
>gi|224069810|ref|XP_002303045.1| predicted protein [Populus trichocarpa]
gi|222844771|gb|EEE82318.1| predicted protein [Populus trichocarpa]
Length = 388
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 173/347 (49%), Gaps = 5/347 (1%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VF +++Q WY G+Y KLI ++GK Q A LF M + GC Y AL++A+
Sbjct: 16 VFELLREQLWYRPYAGMYVKLIVMLGKCKQPDKAHQLFQAMIDEGCAVTHESYTALLSAY 75
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
++ KA ++MK C+P++ TY+IL+++C Q D+V L ++
Sbjct: 76 ----GRSGLFDKAFSIMEEMKNTPDCRPDVHTYSILIKSCLQVFAFDKVQVLLSDMESLG 131
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ-CKPDIITFNLLIDSYGKRQAFDKM 309
+ P+ TYN V+DAYGK M EME+ L M S Q C+PD+ T N I ++G + M
Sbjct: 132 IRPNTVTYNTVIDAYGKAKMFAEMEATLMEMLSQQDCEPDVWTMNSTIRAFGGSGQMEMM 191
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
E ++ + +P + TFN ++ +YGKA K V + M Y+ + +TY +I
Sbjct: 192 ENCYEKFQSAGIEPNIKTFNILLDSYGKAGNYQKMSAVMEYMQRYHYSWTIVTYNVVIDA 251
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
+G ++ + +F + TL +++ AY G P + + N VT D
Sbjct: 252 FGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYREAGKPEKIGSVLRFIENSDVTLD 311
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+ + L AY + ++++L+ ME+ G P+K + ++ +S
Sbjct: 312 TVFFNCLVDAYGRLECFAEMKEVLELMEEKGCKPDKVTYRTMIKAYS 358
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 127/248 (51%), Gaps = 4/248 (1%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
L S+M + G RP+ YN +I A+ KAK A+ +M + C+P++ T N
Sbjct: 123 LLSDMESLGIRPNTVTYNTVIDAY----GKAKMFAEMEATLMEMLSQQDCEPDVWTMNST 178
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+RA + ++ + +++ + + P+I T+N ++D+YGK G ++M +V+ M+
Sbjct: 179 IRAFGGSGQMEMMENCYEKFQSAGIEPNIKTFNILLDSYGKAGNYQKMSAVMEYMQRYHY 238
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
I+T+N++ID++G+ +ME +F+ + + KP+ T S++ Y +A K
Sbjct: 239 SWTIVTYNVVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYREAGKPEKIGS 298
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
V + + T + + C++ YG + + +E+ + + + G T M++AY
Sbjct: 299 VLRFIENSDVTLDTVFFNCLVDAYGRLECFAEMKEVLELMEEKGCKPDKVTYRTMIKAYS 358
Query: 407 MNGLPTEA 414
+ G+ + A
Sbjct: 359 IKGMTSHA 366
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 81/188 (43%), Gaps = 8/188 (4%)
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
LI GK + DK Q+F++++ T ++ +++ YG++ L KA F M MK
Sbjct: 36 LIVMLGKCKQPDKAHQLFQAMIDEGCAVTHESYTALLSAYGRSGLFDKA---FSIMEEMK 92
Query: 356 YTPS----FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
TP TY +I + + + ++ LG T N +++AY +
Sbjct: 93 NTPDCRPDVHTYSILIKSCLQVFAFDKVQVLLSDMESLGIRPNTVTYNTVIDAYGKAKMF 152
Query: 412 TEAD-LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
E + L E PD T +A+ + E+++ ++ + GI PN + F
Sbjct: 153 AEMEATLMEMLSQQDCEPDVWTMNSTIRAFGGSGQMEMMENCYEKFQSAGIEPNIKTFNI 212
Query: 471 ALETFSSS 478
L+++ +
Sbjct: 213 LLDSYGKA 220
>gi|356564951|ref|XP_003550709.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Glycine max]
Length = 488
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 170/352 (48%), Gaps = 5/352 (1%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
WLQ L+VF +++Q +Y G KLI ++GK GQ A LF+ M G P P +Y
Sbjct: 106 WLQALQVFDMLREQTFYQPKEGTCMKLIVLLGKSGQPHRAHQLFTTMIEEGLEPTPELYT 165
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
AL+ A+ ++ + +A +MK + C+P++ TY+ L++ C A D V L++
Sbjct: 166 ALLAAYC----RSNMIDEAFSVLNEMKKLPLCQPDVFTYSTLIKVCVDAFKFDLVQLLYE 221
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGKR 303
E+ E + P+ T N V+ YGK GM +ME VLS M +S CKPD+ T N +I +G
Sbjct: 222 EMAERSITPNTVTQNIVLGGYGKAGMFDQMEKVLSSMLQSTTCKPDVWTMNTIISVFGNM 281
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
D E+ ++ + +P TFN +I YGK R+ K V + M +++ + TY
Sbjct: 282 GQIDMTEKWYEKFRYFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTY 341
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+I + + FD++ G TL ++ Y GL + +
Sbjct: 342 NNVIEAFADAGDAKHMECTFDQMRAEGMKADTKTLCCLINGYANAGLFHKVISSVRLAGK 401
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ + + + Y + A KA ++++ KRM+ + P+ + +E +
Sbjct: 402 LEIPENITFYNAVLSACAKAEDLMEMERVFKRMKDSQCQPDDTTYTIMIEAY 453
>gi|218192673|gb|EEC75100.1| hypothetical protein OsI_11265 [Oryza sativa Indica Group]
Length = 588
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 171/341 (50%), Gaps = 5/341 (1%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
W + L+VF+ +++Q +Y G + KL+ ++G+ GQ A +LF EM GC+P P +Y
Sbjct: 127 WQEALQVFQMLKEQPFYHPKEGTFMKLLLLLGRSGQPSRARYLFDEMLQQGCQPTPELYT 186
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
ALI A+ + L A MK C+P++ TY+ +++AC A D V+A++K
Sbjct: 187 ALIAAYC----RNGLLDDAFRLLADMKASPVCQPDVYTYSTIIKACVDASRFDIVDAMYK 242
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGKR 303
++ + +AP+ T N V+ YG+ G + +ME VLS M S KPD+ T N+++ +G R
Sbjct: 243 DMADRSIAPNTVTQNIVLSGYGRAGRLDDMEKVLSAMLDSTTSKPDVWTMNIILSLFGNR 302
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
+ ME+ ++ +P T N +I YGK R+ K V + M + + + T+
Sbjct: 303 GQIESMEKWYEKFRGYGIEPETRTLNILIGAYGKKRMYDKMSAVMEYMRKLAFPWTTATF 362
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+I + + F+++ G T ++ + GL + + + +
Sbjct: 363 NNVIEAFADAGDAKNMEHTFNQMRAEGMKPDTKTFCCLINGFGNAGLFHKVVGMVKLAER 422
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+GV D++ + + A KA ++++ RM+Q VP+
Sbjct: 423 LGVPMDTTFHNAVLMACVKAEDLMEMERVFMRMKQIQCVPD 463
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 134/305 (43%), Gaps = 2/305 (0%)
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
R + + +T L R AK +AL FQ +K P T+ LL ++
Sbjct: 103 ARAEAKAWACTVTEALADRIDAKNWQEALQVFQMLKEQPFYHPKEGTFMKLLLLLGRSGQ 162
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ-CKPDIITFN 294
+ LF E+ + P Y ++ AY +NG++ + +L+ MK++ C+PD+ T++
Sbjct: 163 PSRARYLFDEMLQQGCQPTPELYTALIAAYCRNGLLDDAFRLLADMKASPVCQPDVYTYS 222
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA-RLQGKAEYVFQKMTA 353
+I + FD ++ ++K + P T N ++ YG+A RL + + + +
Sbjct: 223 TIIKACVDASRFDIVDAMYKDMADRSIAPNTVTQNIVLSGYGRAGRLDDMEKVLSAMLDS 282
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P T I++++G + + +++ G + + TLN ++ AY + +
Sbjct: 283 TTSKPDVWTMNIILSLFGNRGQIESMEKWYEKFRGYGIEPETRTLNILIGAYGKKRMYDK 342
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
+ E + ++T+ + +A+ A + ++ +M G+ P+ + F +
Sbjct: 343 MSAVMEYMRKLAFPWTTATFNNVIEAFADAGDAKNMEHTFNQMRAEGMKPDTKTFCCLIN 402
Query: 474 TFSSS 478
F ++
Sbjct: 403 GFGNA 407
>gi|449441652|ref|XP_004138596.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Cucumis sativus]
gi|449522692|ref|XP_004168360.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Cucumis sativus]
Length = 496
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 174/377 (46%), Gaps = 42/377 (11%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+WLQ LEVF +++Q +Y G Y KL+ ++G+ GQ A LF M C P P +Y
Sbjct: 121 RWLQALEVFEMLREQPFYEPKEGTYMKLLVLLGRSGQPHRARLLFDTMVQERCEPTPELY 180
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
AL+ A+ + + A MK + RC+P++ TY+IL++AC + V +L+
Sbjct: 181 TALLAAYC----RNNLIDDAFSTLNLMKTLPRCQPDVYTYSILIKACVDDSRFEIVESLY 236
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGK 302
+E+ E ++ P+ T N V+ YGK G +ME VL M +S C+PD+ T N+++ +G
Sbjct: 237 EEMAERLITPNTVTQNIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGN 296
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ + ME+ ++ + +P TFN +I YGK R+ K V + M +++ + T
Sbjct: 297 KGHIEMMERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTST 356
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL------------ 410
Y +I + + F+++ G T ++ Y GL
Sbjct: 357 YNNVIEAFADVGDAKNMEYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVIGSVKLAG 416
Query: 411 ----PT-------------------EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
P E D +F+ + PD+ TY ++ +AY K M +
Sbjct: 417 KLEIPENTSFYNAVISACAKAEDLMEMDRVFKRMKDKHCQPDNKTYSIMMEAYGKEGMND 476
Query: 448 LVQKLLKRMEQNGIVPN 464
V L +E+ ++ N
Sbjct: 477 RVHYL--ELEKKQVIDN 491
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 99/228 (43%), Gaps = 5/228 (2%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
GK K+ Q +V M + D + +++V G KG + + + RN G P+
Sbjct: 259 GKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNKGHIEMMERWYEKFRNFGIEPE 318
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQV 239
+N LI A+ R K ++ + Y +K++ TYN ++ A A + +
Sbjct: 319 TRTFNILIGAYGKKRMYDK-MSSVMEYMRKLQ----FPWTTSTYNNVIEAFADVGDAKNM 373
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
F+++ + D T+ +++ Y G+ ++ + + + +N +I +
Sbjct: 374 EYTFEQMRAEGMRADTKTFCCLINGYANAGLFHKVIGSVKLAGKLEIPENTSFYNAVISA 433
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
K + +M++VFK + +P T++ M+ YGK + + Y+
Sbjct: 434 CAKAEDLMEMDRVFKRMKDKHCQPDNKTYSIMMEAYGKEGMNDRVHYL 481
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 185/371 (49%), Gaps = 6/371 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ + LG+ +W + LEVF WM++ + D + ++ ++G++ Q LF +R
Sbjct: 52 IMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREE 111
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ-A 233
G D Y +LI+A R +ALG+F++MK +P++VTYN+++ +
Sbjct: 112 GYPLDVYAYTSLISALSRNRK----FKEALGFFEQMKEAGP-QPSLVTYNVIIDLYGKKG 166
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
R+ + + LF+E+ + PD YTYN + A + +E + ++MKS+ C PD +T+
Sbjct: 167 RSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTY 226
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N L+D YGK +++ V K + + P + T+N ++ +G+A L A + M +
Sbjct: 227 NALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVS 286
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P TY +++ Y V +A EI++++ T NA++ + N +E
Sbjct: 287 KGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSE 346
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
++FE+ GV PD T+ L A+ K M V K+ + M++ G P+K F +E
Sbjct: 347 MMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIE 406
Query: 474 TFSSSLAGSQS 484
+ + Q+
Sbjct: 407 AYGRCGSSDQA 417
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 185/404 (45%), Gaps = 15/404 (3%)
Query: 83 VRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFL-------LFEELGKSDKWLQCLEVFRWM 135
+ V++R +E + T+++ K +R E L L L ++ K+ + L F M
Sbjct: 85 IAVMLRILG-RESQLTTVSRLFKSLREEGYPLDVYAYTSLISALSRNRKFKEALGFFEQM 143
Query: 136 QKQRWYIADTGIYSKLIAVMGKKGQT-RLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR 194
K+ Y+ +I + GKKG++ + LF EM+ G +PD YN ITA
Sbjct: 144 -KEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITACA--- 199
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
+A F +MK C P+ VTYN LL +A ++ + KE+ + P+
Sbjct: 200 -SGSLCEEATELFTQMKS-SNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPN 257
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
I TYN ++ A+G+ G+ + M S +PD+ T+ L+ +Y + ++ +++
Sbjct: 258 IVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYN 317
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
+ S P TFN++I +GK + + +F+ M A P +T+ ++ +G
Sbjct: 318 QMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNG 377
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
S ++F + K G + +T N ++EAY G +A +++ G TPD +T+
Sbjct: 378 MYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFN 437
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
L A + E + +L + ++ PN + L +++
Sbjct: 438 TLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANG 481
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 162/350 (46%), Gaps = 6/350 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + GK+ + + V + M+ + + Y++L++ G+ G A + M +
Sbjct: 229 LLDVYGKAGWYNEAANVLKEMESAGC-LPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSK 287
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G PD Y +L++A+ +A + +A+ + +M+ C PN T+N L+ + +
Sbjct: 288 GIEPDVFTYTSLLSAY----SRAGKVEQAMEIYNQMR-TSNCTPNSFTFNALIGMHGKNK 342
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
N ++ +F+++ + PDI T+N ++ A+GKNGM E+ V MK +PD TFN
Sbjct: 343 NFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFN 402
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+LI++YG+ + D+ ++ ++ + P L TFN+++ + AE + ++
Sbjct: 403 ILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRS 462
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
Y P+ I Y ++ Y + + +E+ D L + L + Y L EA
Sbjct: 463 SYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEA 522
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ F + G D+ST+ + Y K M + + G+ P+
Sbjct: 523 EDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPD 572
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 153/342 (44%), Gaps = 10/342 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L GK+ + + L+VFR M+K + D ++ LI G+ G + A+ ++ M +
Sbjct: 369 LLGAFGKNGMYSEVLKVFRGMKKAG-FEPDKATFNILIEAYGRCGSSDQALSIYDGMLQA 427
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC PD + +N L+ A L + + L + KPN + Y +L A A
Sbjct: 428 GCTPDLATFNTLLAA-LAREGRWEHAELILDELNR----SSYKPNDIAYASMLHAYANGG 482
Query: 235 NVDQVNALFKELHESILAP--DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
++++ + LH +I P I V+ Y K ++ E E M+ + D T
Sbjct: 483 ELEKLKEMVDTLH-TIYVPFTKILLKTFVL-VYSKCSLVDEAEDAFLAMRHHGYLSDTST 540
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
FN +I YGK+ DK F L + +P + T+N ++ YG+ + K E ++
Sbjct: 541 FNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECM 600
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
A TP ++Y +I Y +S A IF E+ G T N + Y G+
Sbjct: 601 AAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFP 660
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
EA + ++ H G PD TY+ L AY K E V+++LK
Sbjct: 661 EALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILK 702
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 147/346 (42%), Gaps = 6/346 (1%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
GK+ + + + +F MQ D ++ L+ GK G + +F M+ +G PD
Sbjct: 339 GKNKNFSEMMVIFEDMQACG-VEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPD 397
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQV 239
+ +N LI A+ +AL+ G Q C P++ T+N LL A A+ +
Sbjct: 398 KATFNILIEAYGRCGSSDQALSIYDGMLQA-----GCTPDLATFNTLLAALAREGRWEHA 452
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
+ EL+ S P+ Y ++ AY G +++++ ++ + + I +
Sbjct: 453 ELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLV 512
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
Y K D+ E F ++ H TFN+MI YGK + KA F + + P
Sbjct: 513 YSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPD 572
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
+TY C++ MYG + E G+ + + N ++ +Y +G + A +F
Sbjct: 573 VVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFH 632
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+ G+ PDS TY Y M ++K M + G P++
Sbjct: 633 EMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDE 678
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 146/325 (44%), Gaps = 5/325 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ L+ V GK G A + EM ++GC P+ YN L++A R A
Sbjct: 222 DRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAF--GRAGLCNAAAE 279
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ KG+E P++ TY LL A ++A V+Q ++ ++ S P+ +T+N ++
Sbjct: 280 MKDSMVSKGIE---PDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIG 336
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+GKN EM + M++ +PDI+T+N L+ ++GK + ++ +VF+ + + +P
Sbjct: 337 MHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEP 396
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
TFN +I YG+ +A ++ M TP T+ ++ A I
Sbjct: 397 DKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELIL 456
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
DEL++ +ML AY G + + + H + V K Y+K
Sbjct: 457 DELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKC 516
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFF 468
++ + + M +G + + F
Sbjct: 517 SLVDEAEDAFLAMRHHGYLSDTSTF 541
>gi|357157771|ref|XP_003577908.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Brachypodium distachyon]
Length = 512
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 175/364 (48%), Gaps = 40/364 (10%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
W + L+VF +++Q +Y G Y KL+ ++G+ GQ LA LF++M+ GC+P P +Y
Sbjct: 138 WPEALQVFEMLKEQPFYYPKEGTYMKLLLLLGRSGQPALAHRLFADMQQQGCQPTPELYT 197
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
ALI A+ ++ L AL MK C+P++ TY+ L++A A D V+A++K
Sbjct: 198 ALIAAYC----RSGLLDDALRLLGDMKAAPLCQPDVYTYSTLIKALVDASRFDLVDAMYK 253
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGKR 303
E+ E +AP+ T N V+ YG+ G + +ME +LS M S KPD+ T N+++ +G
Sbjct: 254 EMAERGVAPNTVTQNIVLSGYGRAGRMDDMEKLLSAMLDSTASKPDVWTMNIILSLFGNS 313
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
D ME+ ++ +P T N +I YGK R+ K V + M + + + TY
Sbjct: 314 GQVDLMEKWYEKFRGYGIEPETRTLNILIGAYGKKRMYDKMSAVMEFMRKLAFPWTTSTY 373
Query: 364 ECIITMYGYCDNVSRAREIFDEL-------------------SKLGKDMKVSTL------ 398
+I + + + F+++ SK G KV +
Sbjct: 374 NNVIEAFAEAGDEKNMEQTFNQMRSEGMKPDTKTFCCLINGFSKAGLFHKVVGMVKLAER 433
Query: 399 ----------NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
N++L A G E + +F + ++ PD++TY +L +AY K M +
Sbjct: 434 LDVPANTSFHNSVLAACARAGDLVEMERVFRHMKHVQCAPDATTYSILVEAYRKEGMTDK 493
Query: 449 VQKL 452
V L
Sbjct: 494 VYDL 497
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 135/307 (43%), Gaps = 6/307 (1%)
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
R D + +T L R AK +AL F+ +K P TY LL ++
Sbjct: 114 ARSDAKAWAPTVTEALSDRIAAKNWPEALQVFEMLKEQPFYYPKEGTYMKLLLLLGRSGQ 173
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ-CKPDIITFN 294
+ LF ++ + P Y ++ AY ++G++ + +L MK+ C+PD+ T++
Sbjct: 174 PALAHRLFADMQQQGCQPTPELYTALIAAYCRSGLLDDALRLLGDMKAAPLCQPDVYTYS 233
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM--- 351
LI + FD ++ ++K + P T N ++ YG+A E + M
Sbjct: 234 TLIKALVDASRFDLVDAMYKEMAERGVAPNTVTQNIVLSGYGRAGRMDDMEKLLSAMLDS 293
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
TA K P T I++++G V + +++ G + + TLN ++ AY +
Sbjct: 294 TASK--PDVWTMNIILSLFGNSGQVDLMEKWYEKFRGYGIEPETRTLNILIGAYGKKRMY 351
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
+ + E + +STY + +A+ +A ++ +++ +M G+ P+ + F
Sbjct: 352 DKMSAVMEFMRKLAFPWTTSTYNNVIEAFAEAGDEKNMEQTFNQMRSEGMKPDTKTFCCL 411
Query: 472 LETFSSS 478
+ FS +
Sbjct: 412 INGFSKA 418
>gi|334188265|ref|NP_199684.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635750|sp|Q9FKC3.2|PP424_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g48730, chloroplastic; Flags: Precursor
gi|332008334|gb|AED95717.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 508
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 173/373 (46%), Gaps = 40/373 (10%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W ++VF +++Q WY + GIY KLI ++GK Q A LF EM N GC + VY
Sbjct: 129 RWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVY 188
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
AL++A+ ++ A ++MK C+P++ TY+IL+++ Q D+V L
Sbjct: 189 TALVSAY----SRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLL 244
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPD------------- 289
++ + P+ TYN ++DAYGK M EMES L +M + CKPD
Sbjct: 245 SDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGG 304
Query: 290 ----------------------IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
I TFN+L+DSYGK + KM V + + T+ T
Sbjct: 305 NGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVT 364
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N +I +G+A + EY+F+ M + + PS +T ++ YG + + +
Sbjct: 365 YNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIE 424
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ + N +++AY E + E G PD TY+ + KAY + M
Sbjct: 425 NSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTT 484
Query: 448 LVQKLLKRMEQNG 460
V++L +E G
Sbjct: 485 HVKELHGVVESVG 497
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 120/256 (46%), Gaps = 31/256 (12%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAH---------------LHTRDKAK-------ALAKAL 204
L S+MR G RP+ YN LI A+ + D K + +A
Sbjct: 243 LLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAF 302
Query: 205 GYFQKMKGMERC---------KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
G +++ ME C +PNI T+NILL + ++ N +++A+ + + + + I
Sbjct: 303 GGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTI 362
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
TYN V+DA+G+ G +K+ME + M+S + P +T L+ +YG+ DK+ V +
Sbjct: 363 VTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRF 422
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
+ +S + L FN ++ YG+ + + V + M + P ITY ++ Y
Sbjct: 423 IENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGM 482
Query: 376 VSRAREIFDELSKLGK 391
+ +E+ + +G+
Sbjct: 483 TTHVKELHGVVESVGE 498
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 38/197 (19%), Positives = 86/197 (43%), Gaps = 8/197 (4%)
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
KP++ + LI GK + +K ++F+ +++ + +++ Y ++ G+ +
Sbjct: 147 KPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRS---GRFDA 203
Query: 347 VFQKMTAMKYT----PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
F + MK + P TY +I + + +++ ++ + G T N ++
Sbjct: 204 AFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLI 263
Query: 403 EAYCMNGLPTEAD-LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+AY + E + L + PDS T +A+ E+++ ++ + +GI
Sbjct: 264 DAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGI 323
Query: 462 VPNKRFFLEALETFSSS 478
PN R F L+++ S
Sbjct: 324 EPNIRTFNILLDSYGKS 340
>gi|359480144|ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Vitis vinifera]
gi|297744374|emb|CBI37344.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 171/365 (46%), Gaps = 40/365 (10%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W L+VF +++Q WY ++GIY KLI ++GK Q A LF M + GC + Y
Sbjct: 117 RWESALKVFELLREQLWYRPNSGIYIKLIVMLGKCKQPEKAHALFLAMIDEGCVVNHEAY 176
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
AL++A+ ++ KA +KMK C+P++ TY++L+++C Q D+V L
Sbjct: 177 TALLSAY----SRSGLFDKAFSLLEKMKNTPDCQPDVHTYSVLIKSCLQVVAFDKVPVLL 232
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPD------------- 289
++ + P+ TYN ++DAYGK EMES L M + +C+PD
Sbjct: 233 SDMANQGIKPNTVTYNTLIDAYGKAKRFAEMESTLLEMLREGKCEPDVWTMNSTLRAFGS 292
Query: 290 ----------------------IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
I TFN+L+DSYGK + ++KM V + + T+ T
Sbjct: 293 SGQIETMEKCYEKFQSAGIEPNIKTFNILLDSYGKAEKYEKMSAVMEYMQKYHFSWTIVT 352
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N +I +G+A + EY+F+ M + + PS +T ++ YG + + +
Sbjct: 353 YNVVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGRAGKAEKIGGVLRFIE 412
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ + N +++AY G E + E G PD TY+ + KAY M
Sbjct: 413 NSDVMLDIVFFNCLVDAYGRLGCFAEMKGVLEMMKKKGCKPDKITYRTMIKAYKIGGMTS 472
Query: 448 LVQKL 452
++L
Sbjct: 473 CAKEL 477
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
Y P+ Y +I M G C +A +F + G + A+L AY +GL +A
Sbjct: 134 YRPNSGIYIKLIVMLGKCKQPEKAHALFLAMIDEGCVVNHEAYTALLSAYSRSGLFDKAF 193
Query: 416 LLFENSHNM-GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L E N PD TY +L K+ + + V LL M GI PN
Sbjct: 194 SLLEKMKNTPDCQPDVHTYSVLIKSCLQVVAFDKVPVLLSDMANQGIKPN 243
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 188/393 (47%), Gaps = 6/393 (1%)
Query: 87 MRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTG 146
+ S + + + +T+ Y + L+F E + W + L +F++MQ+ +W +
Sbjct: 16 LTSLAPRGSIAKTMEGYRNKLTINDFSLIFREFAQRSDWQKALRLFKYMQRHQWCKPNEH 75
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ +I +MG++G A LF +M + + + ALI A+ +L
Sbjct: 76 VYTIMIGIMGREGMLDKASELFEDMPLNDVEWNVYSFTALINAYGRNGQHEASLH----L 131
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQAR-NVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+MK E+ PN++TYN ++ ACA+ + + LF ++ + PDI TYN ++ A
Sbjct: 132 LARMK-REKVTPNLITYNTVINACAKGGLEWEGLLGLFAQMRHEGIQPDIITYNTLLSAC 190
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
G+++E V M PD IT+N L+D YG+ + + ++ + + + P +
Sbjct: 191 SSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGVGELLREMEQAGNAPDV 250
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
+N +I YG+A A +F++M TP +T+ ++ YG R +F +
Sbjct: 251 VAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTD 310
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ + G + V+T N +++ + G E+ LF + + GV PD STY L + K +
Sbjct: 311 MKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGL 370
Query: 446 KELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ +K+ + M Q+ + P F + + ++
Sbjct: 371 HKAAKKIHRHMLQSYVTPTTDGFTGLITAYGNA 403
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 170/351 (48%), Gaps = 11/351 (3%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W L +F M+ + D Y+ L++ +G A +F M +G PD Y
Sbjct: 160 EWEGLLGLFAQMRHEG-IQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITY 218
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERC--KPNIVTYNILLRACAQARNVDQVNA 241
NAL+ + D+ + + + L + ME+ P++V YNIL+ A +A
Sbjct: 219 NALVDIYGQA-DRHEGVGELL------REMEQAGNAPDVVAYNILIEAYGRAGKYRAAAK 271
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
+FK++ E+ PD+ T++ +++AYGK+G E+ + + MK +PD+ T+N LI +G
Sbjct: 272 MFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFG 331
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
+ F + +F L+ +P + T+ ++ + GK L A+ + + M TP+
Sbjct: 332 QGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTD 391
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
+ +IT YG S A F+ + + G + T NA++ A+ GL EA +
Sbjct: 392 GFTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTM 451
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
+ G++ D STY L +A+ + + + + + ME+ PN+ + EAL
Sbjct: 452 IDEGISADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHTY-EAL 501
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 152/338 (44%), Gaps = 14/338 (4%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VFR M + + D+ Y+ L+ + G+ + L EM +G PD YN LI A+
Sbjct: 202 VFRTMNEAG-VVPDSITYNALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAY 260
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
K +A AK Q+ C P++VT++ LL A + D+V LF ++ E
Sbjct: 261 GRA-GKYRAAAKMFKQMQEAG----CTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERG 315
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
PD+ TYN ++ +G+ G +E ++ + +PD+ T+ L+ S GK +
Sbjct: 316 TEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAK 375
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
++ + ++ S PT F +I YG A L +A Y F M P TY +I +
Sbjct: 376 KIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAH 435
Query: 371 G----YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
YC+ S + DE G VST N+++EA+ GL +A +
Sbjct: 436 AGGGLYCEAGSAYLTMIDE----GISADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEARC 491
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+P+ TY+ L Y A + + + ++ G +P+
Sbjct: 492 SPNRHTYEALMGVYCTAGLFDEAKAQFLDLQVGGELPS 529
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 134/296 (45%), Gaps = 17/296 (5%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L E G++ K+ ++F+ MQ+ D +S L+ GK G LF++M+
Sbjct: 255 ILIEAYGRAGKYRAAAKMFKQMQEAG-CTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKE 313
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACA 231
G PD + YN LI + +++ F + G+E P++ TY LL +C
Sbjct: 314 RGTEPDVNTYNTLI----QVFGQGGFFQESINLFWDLLDGGVE---PDMSTYAGLLYSCG 366
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ + + + +S + P + G++ AYG + E + MK + CKPD+
Sbjct: 367 KGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKESGCKPDLE 426
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
T+N LI ++ + + + +++ + T+NS+I +G+ L A + M
Sbjct: 427 TYNALIGAHAGGGLYCEAGSAYLTMIDEGISADVSTYNSLIEAFGRGGLFDDAIEFSRDM 486
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
+ +P+ TYE ++ + YC +FDE D++V +++YC+
Sbjct: 487 EEARCSPNRHTYEALMGV--YC-----TAGLFDEAKAQFLDLQVGGELPSVDSYCL 535
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 139/350 (39%), Gaps = 38/350 (10%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L E GK + + +F M K+R D Y+ LI V G+ G + ++ LF ++ +
Sbjct: 291 LLEAYGKHGCYDEVRLLFTDM-KERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDG 349
Query: 175 GCRPDPSVYNALITA-------------HLH--------TRDKAKALAKALG-------- 205
G PD S Y L+ + H H T D L A G
Sbjct: 350 GVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEA 409
Query: 206 --YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F MK CKP++ TYN L+ A A + + + + + ++ D+ TYN +++
Sbjct: 410 TYAFNSMK-ESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTMIDEGISADVSTYNSLIE 468
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
A+G+ G+ + M+ +C P+ T+ L+ Y FD+ + F L E P
Sbjct: 469 AFGRGGLFDDAIEFSRDMEEARCSPNRHTYEALMGVYCTAGLFDEAKAQFLDLQVGGELP 528
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD---NVSRAR 380
++ ++ ++ + A V ++M + I+ G D N R
Sbjct: 529 SVDSYCLLLSVCARRNRWDDASKVLEEMLEPNMPSIYGVVGGILK--GEMDDGTNWQRVE 586
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
FD L G + NA+LEA G A +F + GV ++
Sbjct: 587 YAFDGLKVDGVGSNLRFYNALLEALWCLGQRERACRVFAEARKRGVLAEA 636
>gi|225432159|ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic [Vitis vinifera]
Length = 498
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 173/376 (46%), Gaps = 43/376 (11%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+WLQ LEVF +++Q +Y G Y KL+ ++GK GQ A LF M GC P +Y
Sbjct: 123 QWLQALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDTMVEEGCEPTTELY 182
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
AL+ ++ ++ + +A +MK + RC+P++ TY+ LL+AC A + V +L+
Sbjct: 183 TALLASYC----RSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKACVDASRFELVESLY 238
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGK 302
+E+ + P+ T N V+ YGK G EME VLS M +S KPD+ T N ++ +G
Sbjct: 239 EEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGN 298
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ + ME+ ++ + +P TFN +I YGK R+ K V + M +++ + T
Sbjct: 299 KGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTST 358
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL------------ 410
Y +I + + FD++ G T ++ Y GL
Sbjct: 359 YNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKVVSSVQLAG 418
Query: 411 ----P-------------------TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
P E + +F + PDS+TY ++ +AY K M +
Sbjct: 419 KFEIPENTSFYNAVISACAKAEDLIEMERVFNRMKDKHCQPDSTTYSIMVEAYKKEGMND 478
Query: 448 LVQKL---LKRMEQNG 460
+ L +RM +G
Sbjct: 479 KIYDLEQERQRMVADG 494
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 116/285 (40%), Gaps = 37/285 (12%)
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
K +AL F+ ++ +P TY LL ++ + + LF + E P
Sbjct: 122 KQWLQALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDTMVEEGCEPTTEL 181
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKS-NQCKPDIITF----------------------- 293
Y ++ +Y ++ +I E S+L++MK+ +C+PD+ T+
Sbjct: 182 YTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKACVDASRFELVESLYEEM 241
Query: 294 ------------NLLIDSYGKRQAFDKMEQVFKSLMHS-KEKPTLPTFNSMIINYGKARL 340
N+++ YGK FD+ME+V ++ S KP + T N+++ +G
Sbjct: 242 DVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQ 301
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
E ++K P T+ +I YG + + + + KL ST N
Sbjct: 302 IEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNN 361
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
++EA+ G + F+ G+ D+ T+ L + Y A +
Sbjct: 362 VIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGL 406
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 40/225 (17%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
GK+ K+ + +V M + D + ++++ G KGQ + + + RN G P+
Sbjct: 261 GKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNFGIEPE 320
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA---CAQARNV 236
+N LI A+ R K ++ + Y +K++ TYN ++ A A+N+
Sbjct: 321 TRTFNILIGAYGKKRMYDK-MSSVMEYMRKLQ----FPWTTSTYNNVIEAFSDVGDAKNM 375
Query: 237 ----DQVNA---------------------LFKELHESI-------LAPDIYTYNGVMDA 264
DQ+ A LF ++ S+ + + YN V+ A
Sbjct: 376 EYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKVVSSVQLAGKFEIPENTSFYNAVISA 435
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
K + EME V +RMK C+PD T+++++++Y K DK+
Sbjct: 436 CAKAEDLIEMERVFNRMKDKHCQPDSTTYSIMVEAYKKEGMNDKI 480
>gi|115452625|ref|NP_001049913.1| Os03g0309800 [Oryza sativa Japonica Group]
gi|108707769|gb|ABF95564.1| PPR2, putative, expressed [Oryza sativa Japonica Group]
gi|108707770|gb|ABF95565.1| PPR2, putative, expressed [Oryza sativa Japonica Group]
gi|108707771|gb|ABF95566.1| PPR2, putative, expressed [Oryza sativa Japonica Group]
gi|113548384|dbj|BAF11827.1| Os03g0309800 [Oryza sativa Japonica Group]
gi|125586018|gb|EAZ26682.1| hypothetical protein OsJ_10586 [Oryza sativa Japonica Group]
gi|215686360|dbj|BAG87621.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215741099|dbj|BAG97594.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767065|dbj|BAG99293.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767110|dbj|BAG99338.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 501
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 170/341 (49%), Gaps = 5/341 (1%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
W + L+VF+ +++Q +Y G + KL+ ++G+ GQ A +LF EM GC+P P +Y
Sbjct: 127 WQEALQVFQMLKEQPFYHPKEGTFMKLLLLLGRSGQPSRARYLFDEMLQQGCQPTPELYT 186
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
ALI A+ + L A MK C+P++ TY+ +++AC A D V+A++K
Sbjct: 187 ALIAAYC----RNGLLDDAFRLLADMKASPVCQPDVYTYSTIIKACVDASRFDIVDAMYK 242
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGKR 303
++ + +AP+ T N V+ YG+ G + +ME VLS M S KPD+ T N+++ +G R
Sbjct: 243 DMADRSIAPNTVTQNIVLSGYGRAGRLDDMEKVLSAMLDSTTSKPDVWTMNIILSLFGNR 302
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
+ ME+ ++ +P T N +I YGK R+ K V + M + + + T+
Sbjct: 303 GQIESMEKWYEKFRGYGIEPETRTLNILIGAYGKKRMYDKMSAVMEYMRKLAFPWTTATF 362
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+I + + F+++ G T ++ + GL + + + +
Sbjct: 363 NNVIEAFADAGDAKNMEHTFNQMRAEGMKPDTKTFCCLINGFGNAGLFHKVVGMVKLAER 422
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+GV D++ + + KA ++++ RM+Q +P+
Sbjct: 423 LGVPMDTTFHNAVLMTCVKAEDLMEMERVFMRMKQIQCIPD 463
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/305 (20%), Positives = 134/305 (43%), Gaps = 2/305 (0%)
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
R + + +T L R AK +AL FQ +K P T+ LL ++
Sbjct: 103 ARAEAKAWACTVTEALADRIDAKNWQEALQVFQMLKEQPFYHPKEGTFMKLLLLLGRSGQ 162
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ-CKPDIITFN 294
+ LF E+ + P Y ++ AY +NG++ + +L+ MK++ C+PD+ T++
Sbjct: 163 PSRARYLFDEMLQQGCQPTPELYTALIAAYCRNGLLDDAFRLLADMKASPVCQPDVYTYS 222
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA-RLQGKAEYVFQKMTA 353
+I + FD ++ ++K + P T N ++ YG+A RL + + + +
Sbjct: 223 TIIKACVDASRFDIVDAMYKDMADRSIAPNTVTQNIVLSGYGRAGRLDDMEKVLSAMLDS 282
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P T I++++G + + +++ G + + TLN ++ AY + +
Sbjct: 283 TTSKPDVWTMNIILSLFGNRGQIESMEKWYEKFRGYGIEPETRTLNILIGAYGKKRMYDK 342
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
+ E + ++T+ + +A+ A + ++ +M G+ P+ + F +
Sbjct: 343 MSAVMEYMRKLAFPWTTATFNNVIEAFADAGDAKNMEHTFNQMRAEGMKPDTKTFCCLIN 402
Query: 474 TFSSS 478
F ++
Sbjct: 403 GFGNA 407
>gi|147820978|emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]
Length = 525
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 168/365 (46%), Gaps = 40/365 (10%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+WLQ LEVF +++Q +Y G Y KL+ ++GK GQ A LF M GC P +Y
Sbjct: 123 QWLQALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDTMVEEGCEPTTELY 182
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
AL+ ++ ++ + +A +MK + RC+P++ TY+ LL+AC A + V +L+
Sbjct: 183 TALLASYC----RSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKACVDASRFELVESLY 238
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGK 302
+E+ + P+ T N V+ YGK G EME VLS M +S KPD+ T N ++ +G
Sbjct: 239 EEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGN 298
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ + ME+ ++ + +P TFN +I YGK R+ K V + M +++ + T
Sbjct: 299 KGQIEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTST 358
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL------------ 410
Y +I + + FD++ G T ++ Y GL
Sbjct: 359 YNNVIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKVVSSVQLAG 418
Query: 411 ----P-------------------TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
P E + +F + PDS+TY ++ +AY K M +
Sbjct: 419 KFEIPENTSFYNAVISACAKAEDLIEMERVFNRMKDKHCQPDSTTYSIMVEAYKKEGMND 478
Query: 448 LVQKL 452
+ L
Sbjct: 479 KIYDL 483
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 116/285 (40%), Gaps = 37/285 (12%)
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
K +AL F+ ++ +P TY LL ++ + + LF + E P
Sbjct: 122 KQWLQALEVFEMLREQPFYQPKEGTYMKLLVLLGKSGQPLRAHELFDTMVEEGCEPTTEL 181
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKS-NQCKPDIITF----------------------- 293
Y ++ +Y ++ +I E S+L++MK+ +C+PD+ T+
Sbjct: 182 YTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFTYSTLLKACVDASRFELVESLYEEM 241
Query: 294 ------------NLLIDSYGKRQAFDKMEQVFKSLMHS-KEKPTLPTFNSMIINYGKARL 340
N+++ YGK FD+ME+V ++ S KP + T N+++ +G
Sbjct: 242 DVRSITPNTVTQNIVLSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQ 301
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
E ++K P T+ +I YG + + + + KL ST N
Sbjct: 302 IEIMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSSVMEYMRKLQFPWTTSTYNN 361
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
++EA+ G + F+ G+ D+ T+ L + Y A +
Sbjct: 362 VIEAFSDVGDAKNMEYTFDQMRAEGMKADTKTFCCLIRGYANAGL 406
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 40/225 (17%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
GK+ K+ + +V M + D + ++++ G KGQ + + + RN G P+
Sbjct: 261 GKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNFGIEPE 320
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA---CAQARNV 236
+N LI A+ R K ++ + Y +K++ TYN ++ A A+N+
Sbjct: 321 TRTFNILIGAYGKKRMYDK-MSSVMEYMRKLQ----FPWTTSTYNNVIEAFSDVGDAKNM 375
Query: 237 ----DQVNA---------------------LFKELHESI-------LAPDIYTYNGVMDA 264
DQ+ A LF ++ S+ + + YN V+ A
Sbjct: 376 EYTFDQMRAEGMKADTKTFCCLIRGYANAGLFHKVVSSVQLAGKFEIPENTSFYNAVISA 435
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
K + EME V +RMK C+PD T+++++++Y K DK+
Sbjct: 436 CAKAEDLIEMERVFNRMKDKHCQPDSTTYSIMVEAYKKEGMNDKI 480
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 184/384 (47%), Gaps = 6/384 (1%)
Query: 96 LVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVM 155
+ R L+ + + L+F+E + W + L +F++MQ+Q W + IY+ +I ++
Sbjct: 87 IARCLDPFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMITLL 146
Query: 156 GKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER 215
G++G +F EM ++G VY A+I A+ + +L MK ER
Sbjct: 147 GREGLLDKCREVFDEMPSNGVARTVYVYTAVINAY----GRNGQFHASLELLNGMK-QER 201
Query: 216 CKPNIVTYNILLRACAQAR-NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
P+I+TYN ++ ACA+ + + + LF E+ + PD+ TYN ++ A G+ E
Sbjct: 202 VSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEA 261
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
E V M + PDI T++ L+ ++GK +K+ ++ + + P + ++N ++
Sbjct: 262 EMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEA 321
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
Y + +A VF++M A + TY ++ +YG R+IF E+ D
Sbjct: 322 YAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPD 381
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
T N +++ + G E LF + V P+ TY+ L A K + E +K+L
Sbjct: 382 AGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILL 441
Query: 455 RMEQNGIVPNKRFFLEALETFSSS 478
M + GIVP+ + + +E F +
Sbjct: 442 HMNEKGIVPSSKAYTGVIEAFGQA 465
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 194/451 (43%), Gaps = 44/451 (9%)
Query: 62 VWTRPRSKRGRKSEELESKELVRVLMRSFSDKEP---LVRTLNKYVKVVRSEHCFLLFEE 118
+W +P L +E + R D+ P + RT+ Y V+ +
Sbjct: 130 IWCKPNEHIYTIMITLLGREGLLDKCREVFDEMPSNGVARTVYVYTAVINA--------- 180
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG-QTRLAMWLFSEMRNSGCR 177
G++ ++ LE+ M+++R Y+ +I + G + LF+EMR+ G +
Sbjct: 181 YGRNGQFHASLELLNGMKQER-VSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQ 239
Query: 178 PDPSVYNALITA--HLHTRDKAKALAKALG----------------YFQKMKGMERCK-- 217
PD YN L+ A H D+A+ + + + F K+ +E+
Sbjct: 240 PDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSEL 299
Query: 218 ----------PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
P+I +YN+LL A A+ ++ + +F+++ + + TY+ +++ YGK
Sbjct: 300 LREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGK 359
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+G ++ + MK + PD T+N+LI +G+ F ++ +F ++ +P + T
Sbjct: 360 HGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMET 419
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ +I GK L A+ + M PS Y +I +G A +F+ ++
Sbjct: 420 YEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMN 479
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
++G + V T N+ + A+ GL EA+ + + G+ D ++ + KA+ + E
Sbjct: 480 EVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYE 539
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
K ME+ PN+ L + S+
Sbjct: 540 EAVKSYVEMEKANCEPNELTLEVVLSVYCSA 570
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 154/336 (45%), Gaps = 12/336 (3%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VFR M + + D YS L+ GK + L EM + G PD + YN L+ A+
Sbjct: 264 VFRTMN-ESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAY 322
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
+ ++ +A+ F++M+ C N TY++LL + D V +F E+ S
Sbjct: 323 A----ELGSIKEAMDVFRQMQAA-GCVANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSN 377
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
PD TYN ++ +G+ G KE+ ++ M +P++ T+ LI + GK ++ +
Sbjct: 378 TDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAK 437
Query: 311 QVFKSLMHSKEKPTLPT---FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
++ L+H EK +P+ + +I +G+A L +A VF M + P+ TY I
Sbjct: 438 KI---LLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFI 494
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
+ A I +++ G V + N +++A+ G EA +
Sbjct: 495 HAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCE 554
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
P+ T +++ Y A + + ++ + ++ +GI+P
Sbjct: 555 PNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILP 590
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 166/372 (44%), Gaps = 11/372 (2%)
Query: 88 RSFSDKEPLV-RTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTG 146
R D+ +V RT+N+ V L + GK ++ + E+ R M+ + D
Sbjct: 255 RGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGG-NLPDIT 313
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH-LHTR-DKAKALAKAL 204
Y+ L+ + G + AM +F +M+ +GC + + Y+ L+ + H R D + +
Sbjct: 314 SYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDI---- 369
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
F +MK + P+ TYNIL++ + +V LF ++ E + P++ TY G++ A
Sbjct: 370 --FLEMK-VSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFA 426
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
GK G+ ++ + +L M P + +I+++G+ +++ VF ++ PT
Sbjct: 427 CGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPT 486
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ T+NS I + + L +AE + +M ++ +I + A + +
Sbjct: 487 VETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYV 546
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E+ K + TL +L YC GL E++ F+ G+ P Y L+ Y K +
Sbjct: 547 EMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILPSVMCYCLMLALYAKND 606
Query: 445 MKELVQKLLKRM 456
L+ M
Sbjct: 607 RLNDAYNLIDEM 618
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 150/356 (42%), Gaps = 22/356 (6%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ ++VFR MQ +A+ YS L+ + GK G+ +F EM+ S PD YN L
Sbjct: 330 EAMDVFRQMQAAGC-VANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNIL 388
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGM------ERCKPNIVTYNILLRACAQARNVDQVN 240
I GYF+++ + E +PN+ TY L+ AC + +
Sbjct: 389 IQVFGEG-----------GYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLYEDAK 437
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
+ ++E + P Y GV++A+G+ + +E V + M P + T+N I ++
Sbjct: 438 KILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAF 497
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
+ + + E + + S K + +FN +I + + +A + +M P+
Sbjct: 498 ARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNE 557
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
+T E ++++Y V + E F E+ G V ML Y N +A L +
Sbjct: 558 LTLEVVLSVYCSAGLVDESEEQFQEIKASGILPSVMCYCLMLALYAKNDRLNDAYNLIDE 617
Query: 421 SHNMGVTPDSSTYKLLYKA-YTKANMKELVQKLLKRMEQNGIVPNKRFF---LEAL 472
M V+ + K + + ++V+ + ++ G RF+ LEAL
Sbjct: 618 MITMRVSDIHQGIGQMIKGDFDDESNWQIVEYVFDKLNSEGCGLGMRFYNALLEAL 673
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 194/401 (48%), Gaps = 11/401 (2%)
Query: 83 VRVLMRSFSDKEP---LVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQR 139
V L+ S P + R L+ + + L+F+E + W + L +F++MQ+Q
Sbjct: 81 VETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQI 140
Query: 140 WYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKA 199
W + IY+ +I V+G++G +F EM + G P + ALI A+ +
Sbjct: 141 WCKPNEHIYTIMIGVLGREGLLEKCQEIFDEMPSHGVAPSVFSFTALINAY----GRNGQ 196
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR-NVDQVNALFKEL-HESILAPDIYT 257
+L +MK ER P+I+TYN ++ +CA+ + +++ LF ++ HE I A DI T
Sbjct: 197 YKSSLELLDRMK-KERVSPSILTYNTVINSCARGGLDWEELLGLFAQMRHEGIQA-DIVT 254
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN ++ A + G+ E E V M PDI T++ L++++GK +K+ ++ K +
Sbjct: 255 YNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEME 314
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
P + ++N ++ + ++ +A VF++M P+ TY ++ +YG
Sbjct: 315 SGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYD 374
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
R++F E+ + +T N ++ + G E LF + V P+ TY+ L
Sbjct: 375 DVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLI 434
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
A K + E +K+L M + G+VP+ + + +E + +
Sbjct: 435 FACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQA 475
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 175/377 (46%), Gaps = 11/377 (2%)
Query: 88 RSFSDKEPLV-RTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTG 146
R D+ +V RT+N+ + L E GK ++ + E+ + M+ + D
Sbjct: 265 RGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSF-PDIT 323
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH-LHTR-DKAKALAKAL 204
Y+ L+ + G + AM +F +M+ +GC P+ + Y+ L+ + H R D + L
Sbjct: 324 SYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDL---- 379
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
F +MK + +PN TYNIL+ + +V LF ++ E + P++ TY G++ A
Sbjct: 380 --FLEMK-VSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFA 436
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
GK G+ ++ + +L M P + +I++YG+ +++ F ++ KPT
Sbjct: 437 CGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPT 496
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ T+NS+I + K L ++E + KM + T+ +I + A + +
Sbjct: 497 VETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYV 556
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E+ K D TL A+L YC GL E++ F +G+ P Y ++ Y KA+
Sbjct: 557 EMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKAD 616
Query: 445 MKELVQKLLKRMEQNGI 461
+ +LL M N +
Sbjct: 617 RWDDAHQLLDEMFTNRV 633
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 162/351 (46%), Gaps = 6/351 (1%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
W + L +F M + AD Y+ L++ ++G A +F M G PD + Y+
Sbjct: 233 WEELLGLFAQM-RHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYS 291
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
L+ T K L K ++M+ P+I +YN+LL A AQ+ ++ + +F+
Sbjct: 292 YLV----ETFGKLNRLEKVSELLKEMESGGSF-PDITSYNVLLEAHAQSGSIKEAMGVFR 346
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
++ + P+ TY+ +++ YG++G ++ + MK + +P+ T+N+LI+ +G+
Sbjct: 347 QMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGG 406
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
F ++ +F ++ +P + T+ +I GK L A+ + M PS Y
Sbjct: 407 YFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYT 466
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
+I YG A F+ ++++G V T N++++ + GL E++ +
Sbjct: 467 GVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQS 526
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
GV + T+ + +A+ + E K ME+ P+++ L +
Sbjct: 527 GVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVY 577
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/393 (20%), Positives = 147/393 (37%), Gaps = 89/393 (22%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L E +S + + VFR MQ + + YS L+ + G+ G+ LF EM+
Sbjct: 327 VLLEAHAQSGSIKEAMGVFRQMQGAG-CVPNAATYSILLNLYGRHGRYDDVRDLFLEMKV 385
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGM------ERCKPNIVTYNILL 227
S P+ + YN LI GYF+++ + E +PN+ TY L+
Sbjct: 386 SNTEPNAATYNILINVFGEG-----------GYFKEVVTLFHDMVEENVEPNMETYEGLI 434
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG--------------------- 266
AC + + + ++E + P Y GV++AYG
Sbjct: 435 FACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSK 494
Query: 267 --------------KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
K G+ KE E++L +M + + TFN +I+++ + F++ +
Sbjct: 495 PTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKA 554
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGY 372
+ + ++ P T +++ Y A L ++E F ++ A+ PS + Y ++ +Y
Sbjct: 555 YVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAK 614
Query: 373 CDNVSRAREIFDE------------------------------------LSKLGKDMKVS 396
D A ++ DE L G + V
Sbjct: 615 ADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDSNWQMVEYVFEKLKSEGCSLGVR 674
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
N +LEA G A + + G+ P+
Sbjct: 675 FYNTLLEALWWLGQKERATRVLNEATKRGLFPE 707
>gi|297792071|ref|XP_002863920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309755|gb|EFH40179.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 498
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 172/352 (48%), Gaps = 27/352 (7%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W L+VF +++Q WY + GIY KLI ++GK Q A LF EM N GC + VY
Sbjct: 132 RWESALQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVY 191
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL- 242
AL++A+ ++ A ++MK C+P++ TY+IL+++ Q D+V+ L
Sbjct: 192 TALLSAY----SRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVHDLL 247
Query: 243 --------------FKELHESILA--------PDIYTYNGVMDAYGKNGMIKEMESVLSR 280
F E+ +++ PD +T N + A+G NG I+ ME+ +
Sbjct: 248 SDMRRLGIRPNTITFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEK 307
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
+S+ +P+I TFN+L+DSYGK + KM V + + T+ T+N +I +G+A
Sbjct: 308 FQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGD 367
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
+ EY+F+ M + + PS +T ++ YG + + + + + N
Sbjct: 368 LKQMEYLFRLMQSERIIPSCVTLCSLVRAYGRAGKADKIGGVLRFIENSDIRLDLVFFNC 427
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
+++AY E + E G PD TY+ + KAY + M V++L
Sbjct: 428 LVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKEL 479
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 57/128 (44%), Gaps = 5/128 (3%)
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
Y P+ Y +I M G C +A E+F E+ G + A+L AY +G A
Sbjct: 149 YKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALLSAYSRSGRFDAAF 208
Query: 416 LLFE---NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
L E +SHN PD TY +L K++ + + V LL M + GI PN F+E
Sbjct: 209 TLLERMKSSHN--CQPDVHTYSILIKSFLQVFAFDKVHDLLSDMRRLGIRPNTITFVEME 266
Query: 473 ETFSSSLA 480
T L
Sbjct: 267 STLIQMLG 274
>gi|326495232|dbj|BAJ85712.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 527
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 176/352 (50%), Gaps = 5/352 (1%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
W L+VF +++Q +Y G Y KL+ ++G+ GQ LA LF+EM+ GC+P P +Y
Sbjct: 153 WQGALQVFEMLKEQPFYYPKEGTYMKLLLLLGRSGQPSLAQDLFTEMQQQGCQPTPELYT 212
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
ALI A+ + L +AL Q MK C+P++ TY+IL++A A D V+A++K
Sbjct: 213 ALIGAYC----RNGLLDEALKLLQDMKANPLCQPDVYTYSILIKAFVDAPRFDLVDAMYK 268
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGKR 303
E+ E +AP+ T N V+ Y + G + +ME +LS M +S KPD+ T N+++ +G
Sbjct: 269 EMAERSVAPNTVTQNIVLSGYCRAGRLDDMEKLLSAMLESANSKPDVWTMNIILSLFGNS 328
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
+ ME+ ++ +P TFN +I YGK R+ K V + M + + + TY
Sbjct: 329 GQVELMEKWYEKFRGYGIEPETRTFNILIGAYGKKRMYDKMSAVMEYMRRLAFPWTTATY 388
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+I + + + F+++ G T ++ + L + + + +
Sbjct: 389 NNVIEAFAEAGDAKNMEDTFNQMRSEGMKPDTKTFCCLINGFSNAALFHKVVGMVKLAER 448
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ V P++S + + A KA ++++ + M+ P+ + LE +
Sbjct: 449 LDVPPNTSFHNSVLAACAKAEDLMEMERVFRHMKHMQCEPDAITYSILLEAY 500
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 142/325 (43%), Gaps = 4/325 (1%)
Query: 156 GKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER 215
G++G+ R + + + R D + +T L R AK AL F+ +K
Sbjct: 111 GRRGRARTP--IKNVQKRLDARADAKAWACTVTEALADRIAAKNWQGALQVFEMLKEQPF 168
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
P TY LL ++ LF E+ + P Y ++ AY +NG++ E
Sbjct: 169 YYPKEGTYMKLLLLLGRSGQPSLAQDLFTEMQQQGCQPTPELYTALIGAYCRNGLLDEAL 228
Query: 276 SVLSRMKSNQ-CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
+L MK+N C+PD+ T+++LI ++ FD ++ ++K + P T N ++
Sbjct: 229 KLLQDMKANPLCQPDVYTYSILIKAFVDAPRFDLVDAMYKEMAERSVAPNTVTQNIVLSG 288
Query: 335 YGKA-RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
Y +A RL + + + + P T I++++G V + +++ G +
Sbjct: 289 YCRAGRLDDMEKLLSAMLESANSKPDVWTMNIILSLFGNSGQVELMEKWYEKFRGYGIEP 348
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
+ T N ++ AY + + + E + ++TY + +A+ +A + ++
Sbjct: 349 ETRTFNILIGAYGKKRMYDKMSAVMEYMRRLAFPWTTATYNNVIEAFAEAGDAKNMEDTF 408
Query: 454 KRMEQNGIVPNKRFFLEALETFSSS 478
+M G+ P+ + F + FS++
Sbjct: 409 NQMRSEGMKPDTKTFCCLINGFSNA 433
>gi|27476102|gb|AAO17033.1| Hypothetical protein [Oryza sativa Japonica Group]
gi|108705848|gb|ABF93643.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125584686|gb|EAZ25350.1| hypothetical protein OsJ_09164 [Oryza sativa Japonica Group]
Length = 450
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 180/355 (50%), Gaps = 6/355 (1%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W LE+F ++KQ+WY + Y++L+ ++GK Q A LF M + +P VY
Sbjct: 68 RWEPALEIFELLRKQQWYKPRSQTYARLLMMLGKCQQPGAATALFKVMLSERLKPTVDVY 127
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
AL+ A+ ++ L +AL ++MKG+ CKP+ T+++L+ C++ R D++ A+
Sbjct: 128 TALVGAYGYS----GLLDQALATVEQMKGVADCKPDEYTFSVLINCCSKLRRFDRIPAIL 183
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGK 302
E+ L + +N ++D YGK GM++EME+ L+ M + PDI T N +I +YG
Sbjct: 184 DEMSYLGLQCNAVIHNAIIDGYGKAGMLEEMENALTSMLEDGDSVPDIYTMNSIIWAYGN 243
Query: 303 R-QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
+ME+ + +P TFN MI +YG A++ K V + M ++P+ +
Sbjct: 244 HGNRIHEMERWYSEFQLMGVEPDTQTFNIMIKSYGNAKMHDKMMSVLKYMKKHFFSPTVV 303
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
T+ II +G N+ + F + G T +++ Y G + + +
Sbjct: 304 TFNIIIESFGRAGNIEKMEYYFRLMKIQGVKPNPITYCSLVNGYSKAGFLDKVPGIIRQT 363
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
N V D+ + + AY K+ ++++++L+ M++ P+K + ++ ++
Sbjct: 364 ENTDVVLDTPFFNCVIDAYAKSGDIKIMEEMLQLMKEKKCKPDKVTYTTMIQAYN 418
>gi|115450301|ref|NP_001048751.1| Os03g0115300 [Oryza sativa Japonica Group]
gi|113547222|dbj|BAF10665.1| Os03g0115300 [Oryza sativa Japonica Group]
Length = 442
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 181/357 (50%), Gaps = 6/357 (1%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
S +W LE+F ++KQ+WY + Y++L+ ++GK Q A LF M + +P
Sbjct: 66 SCRWEPALEIFELLRKQQWYKPRSQTYARLLMMLGKCQQPGAATALFKVMLSERLKPTVD 125
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
VY AL+ A+ ++ L +AL ++MKG+ CKP+ T+++L+ C++ R D++ A
Sbjct: 126 VYTALVGAYGYS----GLLDQALATVEQMKGVADCKPDEYTFSVLINCCSKLRRFDRIPA 181
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSY 300
+ E+ L + +N ++D YGK GM++EME+ L+ M + PDI T N +I +Y
Sbjct: 182 ILDEMSYLGLQCNAVIHNAIIDGYGKAGMLEEMENALTSMLEDGDSVPDIYTMNSIIWAY 241
Query: 301 GKR-QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
G +ME+ + +P TFN MI +YG A++ K V + M ++P+
Sbjct: 242 GNHGNRIHEMERWYSEFQLMGVEPDTQTFNIMIKSYGNAKMHDKMMSVLKYMKKHFFSPT 301
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
+T+ II +G N+ + F + G T +++ Y G + +
Sbjct: 302 VVTFNIIIESFGRAGNIEKMEYYFRLMKIQGVKPNPITYCSLVNGYSKAGFLDKVPGIIR 361
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+ N V D+ + + AY K+ ++++++L+ M++ P+K + ++ ++
Sbjct: 362 QTENTDVVLDTPFFNCVIDAYAKSGDIKIMEEMLQLMKEKKCKPDKVTYTTMIQAYN 418
>gi|125542133|gb|EAY88272.1| hypothetical protein OsI_09727 [Oryza sativa Indica Group]
Length = 450
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 180/355 (50%), Gaps = 6/355 (1%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W LE+F ++KQ+WY + Y++L+ ++GK Q A LF M + +P VY
Sbjct: 68 RWESALEIFELLRKQQWYKPRSQTYARLLMMLGKCRQPGAATALFKVMLSERLKPTVDVY 127
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
AL+ A+ ++ L +AL ++MKG+ CKP+ T+++L+ C++ R D++ A+
Sbjct: 128 TALVGAYGYS----GLLDEALATVEQMKGVADCKPDEYTFSVLINCCSKLRRFDRIPAIL 183
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGK 302
E+ L + +N ++D YGK GM++EME+ L+ M + PDI T N +I +YG
Sbjct: 184 DEMSYLGLQCNAVIHNAIIDGYGKAGMLEEMENALTSMLEDGDSVPDIYTMNSIIWAYGN 243
Query: 303 R-QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
+ME+ + +P TFN MI +YG A++ K V + M ++P+ +
Sbjct: 244 HGNRIHEMERWYSEFQLMGVEPDTQTFNIMIKSYGNAKMHDKMMSVLKYMKKHFFSPTVV 303
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
T+ II +G N+ + F + G T +++ Y G + + +
Sbjct: 304 TFNIIIESFGRAGNIEKMEYYFRLMKIQGVKPNPITYCSLVNGYSKAGFLDKVPGIIRQT 363
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
N V D+ + + AY K+ ++++++L+ M++ P+K + ++ ++
Sbjct: 364 ENTDVVLDTPFFNCVIDAYAKSGDIKIMEEMLQLMKEKKCKPDKVTYTTMIQAYN 418
>gi|9758872|dbj|BAB09426.1| unnamed protein product [Arabidopsis thaliana]
Length = 495
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 174/360 (48%), Gaps = 27/360 (7%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W ++VF +++Q WY + GIY KLI ++GK Q A LF EM N GC + VY
Sbjct: 129 RWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVY 188
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL- 242
AL++A+ ++ A ++MK C+P++ TY+IL+++ Q D+V L
Sbjct: 189 TALVSAY----SRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLL 244
Query: 243 --------------FKELHESILA--------PDIYTYNGVMDAYGKNGMIKEMESVLSR 280
F E+ +++ PD +T N + A+G NG I+ ME+ +
Sbjct: 245 SDMRRQGIRPNTITFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEK 304
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
+S+ +P+I TFN+L+DSYGK + KM V + + T+ T+N +I +G+A
Sbjct: 305 FQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGD 364
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
+ EY+F+ M + + PS +T ++ YG + + + + + N
Sbjct: 365 LKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNC 424
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+++AY E + E G PD TY+ + KAY + M V++L +E G
Sbjct: 425 LVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKELHGVVESVG 484
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 5/128 (3%)
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
Y P+ Y +I M G C +A E+F E+ G + A++ AY +G A
Sbjct: 146 YKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAF 205
Query: 416 LLFE---NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
L E +SHN PD TY +L K++ + + VQ LL M + GI PN F+E
Sbjct: 206 TLLERMKSSHN--CQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITFVEME 263
Query: 473 ETFSSSLA 480
T L
Sbjct: 264 STLIQMLG 271
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 187/400 (46%), Gaps = 9/400 (2%)
Query: 83 VRVLMRSFSDKEP---LVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQR 139
V L+ S P + R L+ + + L+F+E + W + L +F+ MQ+Q
Sbjct: 78 VETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKHMQRQI 137
Query: 140 WYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKA 199
W + IY+ +I+++G++G +F EM G Y ALI ++ +
Sbjct: 138 WCKPNEHIYTIMISLLGREGLLEKCSDIFEEMGAHGVSRSVFSYTALINSY----GRNGK 193
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR-NVDQVNALFKELHESILAPDIYTY 258
+L ++MK ER P+I+TYN ++ +CA+ + + + LF E+ + PDI TY
Sbjct: 194 YEVSLELLERMK-KERVSPSILTYNTVINSCARGGLDWEGLLGLFAEMRHEGIQPDIVTY 252
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N ++ A G+ E E V M PDI T+ L+D++GK DK+ ++ K +
Sbjct: 253 NTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGKLNRLDKVSELLKEMAS 312
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
+ P + ++N ++ Y + A VF+ M P+ TY ++ +YG
Sbjct: 313 TGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDE 372
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
RE+F E+ + +T N +++ + G E LF + V P+ TY+ L
Sbjct: 373 VRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIF 432
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
A K + + +K+L M + G++P+ + + +E + +
Sbjct: 433 ACGKGGLHDDAKKILLHMSEKGMIPSSKAYTGVIEAYGQA 472
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 155/350 (44%), Gaps = 11/350 (3%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
W L +F M+ + D Y+ L+ +G A +F M G PD + Y
Sbjct: 230 WEGLLGLFAEMRHEG-IQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYT 288
Query: 185 ALIT--AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL 242
L+ L+ DK L K + + P I +YN+LL A A+ N++ +
Sbjct: 289 YLVDTFGKLNRLDKVSELLKEMASTGNV-------PEISSYNVLLEAYARIGNIEDATGV 341
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
F+ + E+ P+ TY+ ++ YGK+G E+ + MK + +PD T+N LID +G+
Sbjct: 342 FRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGE 401
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
F ++ +F + +P + T+ +I GK L A+ + M+ PS
Sbjct: 402 GGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKA 461
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y +I YG A + ++++G + T N ++ + GL E + +
Sbjct: 462 YTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMG 521
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
+ GV + ++ + + + + E K ME++ +VP++R LEA+
Sbjct: 522 DFGVARERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRLVPDER-TLEAV 570
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 167/364 (45%), Gaps = 11/364 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG-QTRLAMWLFSEMRN 173
L G++ K+ LE+ M+K+R Y+ +I + G + LF+EMR+
Sbjct: 184 LINSYGRNGKYEVSLELLERMKKER-VSPSILTYNTVINSCARGGLDWEGLLGLFAEMRH 242
Query: 174 SGCRPDPSVYNALITA--HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
G +PD YN L+ A + D+A+ + + + + P+I TY L+
Sbjct: 243 EGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVV-------PDITTYTYLVDTFG 295
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ +D+V+ L KE+ + P+I +YN +++AY + G I++ V M+ C P+
Sbjct: 296 KLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAE 355
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
T+++L+ YGK +D++ ++F + S +P T+N++I +G+ + +F M
Sbjct: 356 TYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFHDM 415
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P+ TYE +I G A++I +S+ G ++EAY +
Sbjct: 416 AEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKAYTGVIEAYGQAAMY 475
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
EA + + MG P TY L + + + + + +L +M G+ + F
Sbjct: 476 EEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMGDFGVARERDSFNGV 535
Query: 472 LETF 475
+E F
Sbjct: 536 IEGF 539
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 156/351 (44%), Gaps = 12/351 (3%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VFR M + + D Y+ L+ GK + L EM ++G P+ S YN L+ A+
Sbjct: 271 VFRTMNEGG-VVPDITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAY 329
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
+ + A G F+ M+ C PN TY+ILL + D+V LF E+ S
Sbjct: 330 ARIGN----IEDATGVFRLMQ-EAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSN 384
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
PD TYN ++D +G+ G KE+ ++ M +P++ T+ LI + GK D +
Sbjct: 385 TEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAK 444
Query: 311 QVFKSLMHSKEKPTLPT---FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
++ L+H EK +P+ + +I YG+A + +A M M P+ TY +I
Sbjct: 445 KI---LLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLI 501
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
M+ I ++ G + + N ++E + G EA + +
Sbjct: 502 YMFARGGLYKETEAILLKMGDFGVARERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRLV 561
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
PD T + + Y A + + + + ++ +GI+PN + L ++ S
Sbjct: 562 PDERTLEAVLSVYCIAGLVDESVEQFQEIKASGILPNVMCYCMMLAVYAKS 612
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 120/291 (41%), Gaps = 41/291 (14%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VFR MQ+ + + YS L+ + GK G+ LF EM+ S PD + YN LI
Sbjct: 341 VFRLMQEAG-CVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVF 399
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
+ + + F M E +PN+ TY L+ AC + D + + E
Sbjct: 400 ----GEGGYFKEVVTLFHDM-AEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKG 454
Query: 251 LAPDIYTYNGVMDAYG-----------------------------------KNGMIKEME 275
+ P Y GV++AYG + G+ KE E
Sbjct: 455 MIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETE 514
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
++L +M + +FN +I+ + + F++ + + + S+ P T +++ Y
Sbjct: 515 AILLKMGDFGVARERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRLVPDERTLEAVLSVY 574
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
A L ++ FQ++ A P+ + Y ++ +Y D + A E+ DE+
Sbjct: 575 CIAGLVDESVEQFQEIKASGILPNVMCYCMMLAVYAKSDRWNEAYELLDEM 625
>gi|168045490|ref|XP_001775210.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673423|gb|EDQ59946.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 404
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 169/362 (46%), Gaps = 16/362 (4%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ EL + W LEVF W +KQ WY ++ +Y++LI +G++G+ A LF EM
Sbjct: 16 VLTELQRQHDWRCTLEVFSWSKKQSWYCPNSRLYTRLIGFLGREGRVHNATLLFQEMLLE 75
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK--GMERCKPNIVTYNILLRACAQ 232
C+ D Y AL+ A+ KAK +AL F MK C+PN VT N L+ A +
Sbjct: 76 KCQADQYTYTALVNAY----GKAKMFEEALAVFSHMKESNEPNCQPNTVTCNALIDALVK 131
Query: 233 ARNVDQVNALFKELHESI------LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ- 285
DQ +F ++ + P++ TYN ++DA K G++ VL M+
Sbjct: 132 GGLYDQAIQVFFDMRDGTNGLEHGCEPNVITYNVLIDALCKEGLLDIGMKVLQYMRDGNT 191
Query: 286 ---CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
+P+ T+N LI++ GK ++K E++ ++ +P T+ ++I YGKA L
Sbjct: 192 DQSVQPNSATYNTLINACGKGGLYEKAEELVDLMVEHGVQPDHITYTALIDAYGKAGLWE 251
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
AE F+ M + + Y +I YG +A E+F + G T +++
Sbjct: 252 NAENTFKGMKGTNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMMQHSGLRPNQVTYLSLM 311
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
EAY GLP E+ +F G + Y L AY KA ++L M + G
Sbjct: 312 EAYGKAGLPEESRNVFNIMRESGYEGNVLIYSSLIDAYGKAGNYLEAARMLDMMRRAGCQ 371
Query: 463 PN 464
PN
Sbjct: 372 PN 373
>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 179/366 (48%), Gaps = 6/366 (1%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
L+F+E W + L +F++MQ+Q W + IY+ +I+++G++G +F EM +
Sbjct: 117 LVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMAS 176
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G Y ALI A+ + +L ++MK ER PNI+TYN ++ ACA+
Sbjct: 177 QGVIRSVFSYTALINAY----GRNGQYETSLELLERMK-RERVSPNILTYNTVINACARG 231
Query: 234 R-NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+ + + LF E+ + PD+ TYN ++ A G+ E E V M P+I T
Sbjct: 232 DLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITT 291
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
++ +++++GK +K+ + K + P + ++N +I + K +A VF++M
Sbjct: 292 YSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQ 351
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
A P+ TY ++ +YG RE+F ++ + + +T N ++ + G
Sbjct: 352 AAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFK 411
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
E LF + + + P+ TY+ L A K + E +K+L M GIVP+ + + +
Sbjct: 412 EVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLI 471
Query: 473 ETFSSS 478
E + +
Sbjct: 472 EAYGQA 477
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 159/344 (46%), Gaps = 10/344 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ E GK K + + + M+ + Y+ D Y+ LI K G + AM +F +M+ +
Sbjct: 295 IVETFGKLGKLEKVAMLLKEMESEG-YLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAA 353
Query: 175 GCRPDPSVYNALITAH-LHTR-DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
GC P+ S Y+ L+ + H R D + L F +MK +P+ TYNIL+R +
Sbjct: 354 GCVPNASTYSILLNLYGKHGRYDDVREL------FLQMK-ESSAEPDATTYNILIRVFGE 406
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+V LF +L + + P++ TY G++ A GK G+ ++ + +L M P
Sbjct: 407 GGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKA 466
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
++ LI++YG+ +D+ F ++ K T+ T+NS+I + + L + E + +M
Sbjct: 467 YSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMR 526
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ + ++ II Y A + F E+ K+ ++ TL +L YC GL
Sbjct: 527 EYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVD 586
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
E+ F G+ P Y ++ Y K + +LL M
Sbjct: 587 ESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASELLDEM 630
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 123/279 (44%), Gaps = 14/279 (5%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L GK ++ E+F M K+ D Y+ LI V G+ G + + LF ++ +
Sbjct: 364 ILLNLYGKHGRYDDVRELFLQM-KESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVD 422
Query: 174 SGCRPDPSVYNALITA----HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA 229
P+ Y L+ A LH AK + + KG+ P+ Y+ L+ A
Sbjct: 423 ENIDPNMETYEGLVFACGKGGLHED------AKKILFHMNGKGI---VPSSKAYSGLIEA 473
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
QA D+ F ++E I TYN ++ + + G+ KE E++LSRM+ +
Sbjct: 474 YGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRN 533
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
+F+ +I+ Y + +++ + F + + + T ++ Y A L +++ F
Sbjct: 534 AKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFI 593
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
++ A PS + Y ++ +Y A E+ DE+ K
Sbjct: 594 EIKASGILPSVLCYCMMLAVYAKNGRWDDASELLDEMIK 632
>gi|168045050|ref|XP_001774992.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673739|gb|EDQ60258.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 385
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 160/335 (47%), Gaps = 5/335 (1%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
+VF ++ Q WY AD Y KL+ ++ K Q A +F + RP +++ AL+T
Sbjct: 19 QVFELVRAQEWYTADLSTYLKLLTMLAKAKQAAEASNVFDCLLEDKLRPTTAIFTALLTV 78
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ KAL F+ M+ E C P+ TY +++ C +A Q +F E+
Sbjct: 79 FTQSNQ----FKKALEIFESMRLYEGCVPDKYTYTAMIKGCCEAGLYVQARKIFDEMMIE 134
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+ P I TYN ++ YGK G+ +E+E VLS M++N PD +T+N LI +G +M
Sbjct: 135 GVKPSIVTYNILIHGYGKAGLFREVERVLSTMEANNVAPDTVTWNTLIRVFGLNCKIPEM 194
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
EQ ++ L+ +P + T NS+I YG A L K E V Q M Y + ITY I+
Sbjct: 195 EQAYEGLLRQGLQPDMVTLNSLISAYGTAGLFEKMESVTQYMQRYNYPMTRITYNIIMEA 254
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
YG V + E + + ST +ML AY +G + + + D
Sbjct: 255 YGRAGMVDQMEETWKRMKAEFVKPNSSTFCSMLSAYGRHGYWHNVEKVMRQARYFDAA-D 313
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
++ Y A+ +A E ++K+ + M+ G P+
Sbjct: 314 TAVYNAAIDAFQRAQNFEDMEKIFEEMKLKGHAPD 348
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 127/285 (44%), Gaps = 6/285 (2%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
+S+++ + LE+F M+ + D Y+ +I + G A +F EM G +P
Sbjct: 81 QSNQFKKALEIFESMRLYEGCVPDKYTYTAMIKGCCEAGLYVQARKIFDEMMIEGVKPSI 140
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
YN LI H KA + M+ P+ VT+N L+R + ++
Sbjct: 141 VTYNILI----HGYGKAGLFREVERVLSTMEA-NNVAPDTVTWNTLIRVFGLNCKIPEME 195
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
++ L L PD+ T N ++ AYG G+ ++MESV M+ IT+N+++++Y
Sbjct: 196 QAYEGLLRQGLQPDMVTLNSLISAYGTAGLFEKMESVTQYMQRYNYPMTRITYNIIMEAY 255
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
G+ D+ME+ +K + KP TF SM+ YG+ E V ++ +
Sbjct: 256 GRAGMVDQMEETWKRMKAEFVKPNSSTFCSMLSAYGRHGYWHNVEKVMRQARYFDAADTA 315
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+ Y I + N +IF+E+ G T + ++ AY
Sbjct: 316 V-YNAAIDAFQRAQNFEDMEKIFEEMKLKGHAPDDVTYSILIGAY 359
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 124/271 (45%), Gaps = 1/271 (0%)
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F+ ++ E ++ TY LL A+A+ + + +F L E L P + ++ +
Sbjct: 21 FELVRAQEWYTADLSTYLKLLTMLAKAKQAAEASNVFDCLLEDKLRPTTAIFTALLTVFT 80
Query: 267 KNGMIKEMESVLSRMKSNQ-CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
++ K+ + M+ + C PD T+ +I + + + ++F +M KP++
Sbjct: 81 QSNQFKKALEIFESMRLYEGCVPDKYTYTAMIKGCCEAGLYVQARKIFDEMMIEGVKPSI 140
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+N +I YGKA L + E V M A P +T+ +I ++G + + ++
Sbjct: 141 VTYNILIHGYGKAGLFREVERVLSTMEANNVAPDTVTWNTLIRVFGLNCKIPEMEQAYEG 200
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
L + G + TLN+++ AY GL + + + + TY ++ +AY +A M
Sbjct: 201 LLRQGLQPDMVTLNSLISAYGTAGLFEKMESVTQYMQRYNYPMTRITYNIIMEAYGRAGM 260
Query: 446 KELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+ +++ KRM+ + PN F L +
Sbjct: 261 VDQMEETWKRMKAEFVKPNSSTFCSMLSAYG 291
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 97/207 (46%), Gaps = 18/207 (8%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT ++ LI V G + + + G +PD N+LI+A+
Sbjct: 174 DTVTWNTLIRVFGLNCKIPEMEQAYEGLLRQGLQPDMVTLNSLISAY-----------GT 222
Query: 204 LGYFQKMKG----MERCKPNI--VTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
G F+KM+ M+R + +TYNI++ A +A VDQ+ +K + + P+ T
Sbjct: 223 AGLFEKMESVTQYMQRYNYPMTRITYNIIMEAYGRAGMVDQMEETWKRMKAEFVKPNSST 282
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
+ ++ AYG++G +E V+ + + D +N ID++ + Q F+ ME++F+ +
Sbjct: 283 FCSMLSAYGRHGYWHNVEKVMRQARYFDA-ADTAVYNAAIDAFQRAQNFEDMEKIFEEMK 341
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKA 344
P T++ +I Y + R KA
Sbjct: 342 LKGHAPDDVTYSILIGAYERIRRVDKA 368
>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 179/366 (48%), Gaps = 6/366 (1%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
L+F+E W + L +F++MQ+Q W + IY+ +I+++G++G +F EM +
Sbjct: 117 LVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMAS 176
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G Y ALI A+ + +L ++MK ER PNI+TYN ++ ACA+
Sbjct: 177 QGVIRSVFSYTALINAY----GRNGQYETSLELLERMK-RERVSPNILTYNTVINACARG 231
Query: 234 R-NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+ + + LF E+ + PD+ TYN ++ A G+ E E V M P+I T
Sbjct: 232 DLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITT 291
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
++ +++++GK +K+ + K + P + ++N +I + K +A VF++M
Sbjct: 292 YSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQ 351
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
A P+ TY ++ +YG RE+F ++ + + +T N ++ + G
Sbjct: 352 AAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFK 411
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
E LF + + + P+ TY+ L A K + E +K+L M GIVP+ + + +
Sbjct: 412 EVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLI 471
Query: 473 ETFSSS 478
E + +
Sbjct: 472 EAYGQA 477
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 159/344 (46%), Gaps = 10/344 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ E GK K + + + M+ + Y+ D Y+ LI K G + AM +F +M+ +
Sbjct: 295 IVETFGKLGKLEKVAMLLKEMESEG-YLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAA 353
Query: 175 GCRPDPSVYNALITAH-LHTR-DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
GC P+ S Y+ L+ + H R D + L F +MK +P+ TYNIL+R +
Sbjct: 354 GCVPNASTYSILLNLYGKHGRYDDVREL------FLQMK-ESSAEPDATTYNILIRVFGE 406
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+V LF +L + + P++ TY G++ A GK G+ ++ + +L M P
Sbjct: 407 GGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKA 466
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
++ LI++YG+ +D+ F ++ K T+ T+NS+I + + L + E + +M
Sbjct: 467 YSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMR 526
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ + ++ II Y A + F E+ K+ ++ TL +L YC GL
Sbjct: 527 EYGISRNAKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVD 586
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
E+ F G+ P Y ++ Y K + +LL M
Sbjct: 587 ESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASELLDEM 630
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 123/279 (44%), Gaps = 14/279 (5%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L GK ++ E+F M K+ D Y+ LI V G+ G + + LF ++ +
Sbjct: 364 ILLNLYGKHGRYDDVRELFLQM-KESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVD 422
Query: 174 SGCRPDPSVYNALITA----HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA 229
P+ Y L+ A LH AK + + KG+ P+ Y+ L+ A
Sbjct: 423 ENIDPNMETYEGLVFACGKGGLHED------AKKILFHMNGKGI---VPSSKAYSGLIEA 473
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
QA D+ F ++E I TYN ++ + + G+ KE E++LSRM+ +
Sbjct: 474 YGQAALYDEALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRN 533
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
+F+ +I+ Y + +++ + F + + + T ++ Y A L +++ F
Sbjct: 534 AKSFSGIIEGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFI 593
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
++ A PS + Y ++ +Y A E+ DE+ K
Sbjct: 594 EIKASGILPSVLCYCMMLAVYAKNGRWDDASELLDEMIK 632
>gi|108707772|gb|ABF95567.1| PPR2, putative, expressed [Oryza sativa Japonica Group]
Length = 443
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 167/336 (49%), Gaps = 5/336 (1%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
+VF+ +++Q +Y G + KL+ ++G+ GQ A +LF EM GC+P P +Y ALI A
Sbjct: 74 QVFQMLKEQPFYHPKEGTFMKLLLLLGRSGQPSRARYLFDEMLQQGCQPTPELYTALIAA 133
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ + L A MK C+P++ TY+ +++AC A D V+A++K++ +
Sbjct: 134 YC----RNGLLDDAFRLLADMKASPVCQPDVYTYSTIIKACVDASRFDIVDAMYKDMADR 189
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGKRQAFDK 308
+AP+ T N V+ YG+ G + +ME VLS M S KPD+ T N+++ +G R +
Sbjct: 190 SIAPNTVTQNIVLSGYGRAGRLDDMEKVLSAMLDSTTSKPDVWTMNIILSLFGNRGQIES 249
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
ME+ ++ +P T N +I YGK R+ K V + M + + + T+ +I
Sbjct: 250 MEKWYEKFRGYGIEPETRTLNILIGAYGKKRMYDKMSAVMEYMRKLAFPWTTATFNNVIE 309
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
+ + F+++ G T ++ + GL + + + + +GV
Sbjct: 310 AFADAGDAKNMEHTFNQMRAEGMKPDTKTFCCLINGFGNAGLFHKVVGMVKLAERLGVPM 369
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
D++ + + KA ++++ RM+Q +P+
Sbjct: 370 DTTFHNAVLMTCVKAEDLMEMERVFMRMKQIQCIPD 405
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 133/303 (43%), Gaps = 7/303 (2%)
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
P PS +LI + T + ++ FQ +K P T+ LL ++
Sbjct: 52 PAPSPRPSLIASTPKTGKR-----RSSQVFQMLKEQPFYHPKEGTFMKLLLLLGRSGQPS 106
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ-CKPDIITFNLL 296
+ LF E+ + P Y ++ AY +NG++ + +L+ MK++ C+PD+ T++ +
Sbjct: 107 RARYLFDEMLQQGCQPTPELYTALIAAYCRNGLLDDAFRLLADMKASPVCQPDVYTYSTI 166
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA-RLQGKAEYVFQKMTAMK 355
I + FD ++ ++K + P T N ++ YG+A RL + + + +
Sbjct: 167 IKACVDASRFDIVDAMYKDMADRSIAPNTVTQNIVLSGYGRAGRLDDMEKVLSAMLDSTT 226
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
P T I++++G + + +++ G + + TLN ++ AY + +
Sbjct: 227 SKPDVWTMNIILSLFGNRGQIESMEKWYEKFRGYGIEPETRTLNILIGAYGKKRMYDKMS 286
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ E + ++T+ + +A+ A + ++ +M G+ P+ + F + F
Sbjct: 287 AVMEYMRKLAFPWTTATFNNVIEAFADAGDAKNMEHTFNQMRAEGMKPDTKTFCCLINGF 346
Query: 476 SSS 478
++
Sbjct: 347 GNA 349
>gi|357479161|ref|XP_003609866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510921|gb|AES92063.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 176/378 (46%), Gaps = 41/378 (10%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+WLQ LE +++Q +Y G Y KLI ++GK GQ + A LF+ M GC P P +Y
Sbjct: 117 QWLQALETLDMLREQSFYQPREGTYMKLIVLLGKSGQPQRAHQLFTAMIEEGCDPTPELY 176
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
AL+ A+ ++ + +AL +MK C+P++ TY+ L++AC + + L+
Sbjct: 177 TALLAAYC----RSNMIDEALSILDEMKNHPLCQPDVFTYSTLIKACVDIFKFELIELLY 232
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIIT---------- 292
+E+ + + P+ T N V++ YGK GM +ME VLS M +S CKPD+ T
Sbjct: 233 EEMAQRSIMPNTVTQNIVLNGYGKAGMFDQMEKVLSGMLQSADCKPDVWTMNTIIGVFGN 292
Query: 293 -------------------------FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
FN+LI SYGK++ +DKM V + + + T T
Sbjct: 293 MGQIDMMEKWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLQFPWTTST 352
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N++I + +A EY F +M + T+ C+I + + +
Sbjct: 353 YNNVIEAFAEAGDAKNMEYTFNQMRSEGMRADTKTFCCLIKGFANAGLFHKVISSVQLAA 412
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
KL + + NA+L A E D +F + D +TY ++ +AY K M +
Sbjct: 413 KLEIPLNTAFYNAVLSACAKAEDLMEMDRVFMRMKDTQCPLDDTTYSIMVEAYRKEGMND 472
Query: 448 LVQKLLKRMEQNGIVPNK 465
+ L++ +Q I NK
Sbjct: 473 KIY-YLEQEKQTMITDNK 489
>gi|357120957|ref|XP_003562190.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Brachypodium distachyon]
Length = 454
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 171/353 (48%), Gaps = 6/353 (1%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG-CRPDPSVY 183
W LE+F M+KQRWY T Y++L+ ++GK Q A LF M + P VY
Sbjct: 73 WESALEIFELMRKQRWYEPRTRTYARLLMMLGKCRQPGPAAALFRVMLSEERLAPTVDVY 132
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
AL+ A+ ++ L +AL + MKG CKP+ T++IL+ C ++R D + +
Sbjct: 133 TALVGAYGYS----GMLDEALATVELMKGAADCKPDEYTFSILINCCCKSRRFDLIPPVL 188
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGK 302
E+ + ++ +N ++D YGK GM+ EM + L M + PDI T N +I +YG
Sbjct: 189 DEMSYLGIGCNVVIHNAIIDGYGKAGMLAEMGTALCNMLEDGDNVPDIYTMNSIIWAYGN 248
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
R D ME+ + +P TFN MI +YGKA + K V + M ++P+ T
Sbjct: 249 RGRVDDMEKWYSEFQLMGVEPDSRTFNIMIKSYGKANMHEKMMMVLKYMKRRFFSPTAAT 308
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
+ II +G ++ + F + G T +++ Y G+ + + +
Sbjct: 309 FNIIIECFGRAGDIEKMEYYFRLMKIQGIKPNPITYCSLVNGYSKAGILDKVPAIIRQTE 368
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
N V D+ + + AY K+ ++++++L+ M++ P K + ++ +
Sbjct: 369 NTDVVLDTPFFNCVINAYAKSGDIKIMEEMLQLMKEKKCKPGKVIYTTMIQAY 421
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 124/314 (39%), Gaps = 38/314 (12%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE-LHESILAPDIYTYNGV 261
AL F+ M+ +P TY LL + R ALF+ L E LAP + Y +
Sbjct: 76 ALEIFELMRKQRWYEPRTRTYARLLMMLGKCRQPGPAAALFRVMLSEERLAPTVDVYTAL 135
Query: 262 MDAYGKNGMIKEMESVLSRMK-SNQCKPDIITFNLLI----------------------- 297
+ AYG +GM+ E + + MK + CKPD TF++LI
Sbjct: 136 VGAYGYSGMLDEALATVELMKGAADCKPDEYTFSILINCCCKSRRFDLIPPVLDEMSYLG 195
Query: 298 ------------DSYGKRQAFDKMEQVFKSLMHSKEK-PTLPTFNSMIINYGKARLQGKA 344
D YGK +M +++ + P + T NS+I YG
Sbjct: 196 IGCNVVIHNAIIDGYGKAGMLAEMGTALCNMLEDGDNVPDIYTMNSIIWAYGNRGRVDDM 255
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
E + + M P T+ +I YG + + + + + +T N ++E
Sbjct: 256 EKWYSEFQLMGVEPDSRTFNIMIKSYGKANMHEKMMMVLKYMKRRFFSPTAATFNIIIEC 315
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ G + + F G+ P+ TY L Y+KA + + V ++++ E +V +
Sbjct: 316 FGRAGDIEKMEYYFRLMKIQGIKPNPITYCSLVNGYSKAGILDKVPAIIRQTENTDVVLD 375
Query: 465 KRFFLEALETFSSS 478
FF + ++ S
Sbjct: 376 TPFFNCVINAYAKS 389
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 187/399 (46%), Gaps = 13/399 (3%)
Query: 74 SEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEH--------CFLLFEELGKSDKW 125
S +L E L+R ++ R L Y +V+ H ++ LG+ K
Sbjct: 156 SHQLVGLEDFPYLLRELGNRGEWERALQGYEWMVQQGHLRSEWSKLASIMISTLGRLGKV 215
Query: 126 LQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
L+VF QK + + YS +++ G+ G+ R A+ +F M+ +GC+P+ YN
Sbjct: 216 EIALDVFNRAQKAG-FGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNT 274
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
+I A L KAL F++M+ E +P+ +T+N L+ C++ + +F E
Sbjct: 275 IIDA---CGKGGVDLKKALDIFEEMQ-KEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAE 330
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ + DI+TYN ++DA K G ++ S++S M+ P+++T++ +ID YGK
Sbjct: 331 MQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGC 390
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
F++ ++ + S +P ++N++I Y K A + M + +TY
Sbjct: 391 FEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNA 450
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+I YG A +FD++ G V T +A+++AY G+ +A +F G
Sbjct: 451 LIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAG 510
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ PD Y L + K + E LL+ M Q GI PN
Sbjct: 511 LKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPN 549
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 117/289 (40%), Gaps = 63/289 (21%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
AD Y+ LI GK+G+ + A LF +M+ G P+ Y+ALI A+ KA
Sbjct: 443 ADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAY----SKAGMHQD 498
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A F + K KP++V Y+ L+ +C + V+ L +E+ ++ + P+I TYN ++
Sbjct: 499 ATSIFVEFK-RAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLI 557
Query: 263 DAYGKNGMIKEME------------------------------------------SVLSR 280
DAYG+NG + +E SV
Sbjct: 558 DAYGRNGQVDNVEAAKGNMPINVFNKVGDRSTEIICKTLTSQQNANDHTGVLAAVSVFHE 617
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
M+ KP+++TF+ ++++ + + + + + + F+S + L
Sbjct: 618 MQQFGLKPNVVTFSAILNACSRCSSLQEASVLLEQMRF---------FDSWVYGIAHGLL 668
Query: 341 QGKAEYV-------FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
G E+V F ++ M Y Y + + + A+E+
Sbjct: 669 MGLREHVWVEAQRLFDEIARMDYATGAAFYNALTDVLWHFGQRQGAQEV 717
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 183/384 (47%), Gaps = 6/384 (1%)
Query: 96 LVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVM 155
+ R L+ + + L+F+E + W + L +F++MQ+Q W + I++ +I ++
Sbjct: 85 IARCLDPFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIHTIMITLL 144
Query: 156 GKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER 215
G++G +F EM ++G Y A+I A+ + +L MK ER
Sbjct: 145 GREGLLDKCREVFDEMPSNGVVRTVYSYTAIINAY----GRNGQFHASLELLNGMK-QER 199
Query: 216 CKPNIVTYNILLRACAQAR-NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
P+I+TYN ++ ACA+ + + + LF E+ + PD+ TYN ++ A G+ E
Sbjct: 200 VSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEA 259
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
E V M + PDI T++ L+ ++GK +K+ ++ + + P + ++N ++
Sbjct: 260 EMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLEA 319
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
Y + +A VF++M A + TY ++ +YG R++F E+ D
Sbjct: 320 YAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPD 379
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
T N +++ + G E LF + V P+ TY+ L A K + E +K+L
Sbjct: 380 AGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAKKILL 439
Query: 455 RMEQNGIVPNKRFFLEALETFSSS 478
M + G+VP+ + + +E F +
Sbjct: 440 HMNEKGVVPSSKAYTGVIEAFGQA 463
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 98/451 (21%), Positives = 195/451 (43%), Gaps = 44/451 (9%)
Query: 62 VWTRPRSKRGRKSEELESKELVRVLMRSFSDKEP---LVRTLNKYVKVVRSEHCFLLFEE 118
+W +P L +E + R D+ P +VRT+ Y ++ +
Sbjct: 128 IWCKPNEHIHTIMITLLGREGLLDKCREVFDEMPSNGVVRTVYSYTAIINA--------- 178
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG-QTRLAMWLFSEMRNSGCR 177
G++ ++ LE+ M+++R Y+ +I + G + LF+EMR+ G +
Sbjct: 179 YGRNGQFHASLELLNGMKQER-VSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQ 237
Query: 178 PDPSVYNALI--TAHLHTRDKAKALAKALG----------------YFQKMKGMERCK-- 217
PD YN L+ AH D+A+ + + + F K+ +E+
Sbjct: 238 PDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSEL 297
Query: 218 ----------PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
P+I +YN+LL A A+ ++ + +F+++ + + TY+ +++ YGK
Sbjct: 298 LREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGK 357
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+G ++ + MK + PD T+N+LI +G+ F ++ +F + +P + T
Sbjct: 358 HGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQT 417
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ +I GK L A+ + M PS Y +I +G A +F+ ++
Sbjct: 418 YEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMN 477
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
++G + V T N+++ A+ GL EA+ + + G+ D ++ + +A+ + E
Sbjct: 478 EVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYE 537
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
K ME+ PN+ L + S+
Sbjct: 538 EAVKSYVEMEKANCEPNELTLEAVLSIYCSA 568
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 155/337 (45%), Gaps = 12/337 (3%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VFR M + + D YS L+ GK + L EM G PD + YN L+ A+
Sbjct: 262 VFRTMN-ESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLEAY 320
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
+ ++ +A+G F++M+ C N TY++LL + D V LF E+ S
Sbjct: 321 A----ELGSIKEAMGVFRQMQA-AGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSN 375
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
PD TYN ++ +G+ G KE+ ++ M +P++ T+ LI + GK ++ +
Sbjct: 376 TDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFACGKGGLYEDAK 435
Query: 311 QVFKSLMHSKEKPTLPT---FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
++ L+H EK +P+ + +I +G+A L +A +F M + P+ TY +I
Sbjct: 436 KI---LLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLI 492
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
+ A I +++ G V + N ++EA+ G EA +
Sbjct: 493 HAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSYVEMEKANCE 552
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
P+ T + + Y A + + ++ + ++ +GI+P+
Sbjct: 553 PNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILPS 589
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 163/358 (45%), Gaps = 11/358 (3%)
Query: 88 RSFSDKEPLV-RTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTG 146
R D+ +V RT+N+ V L + GK ++ + E+ R M+ + D
Sbjct: 253 RGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECG-GNLPDIT 311
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH-LHTR-DKAKALAKAL 204
Y+ L+ + G + AM +F +M+ +GC + + Y+ L+ + H R D + L
Sbjct: 312 SYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDL---- 367
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
F +MK + P+ TYNIL++ + +V LF ++ E + P++ TY G++ A
Sbjct: 368 --FLEMK-VSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFA 424
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
GK G+ ++ + +L M P + +I+++G+ +++ +F ++ PT
Sbjct: 425 CGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPT 484
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ T+NS+I + + L +AE + +M ++ +I + A + +
Sbjct: 485 VETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSYV 544
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
E+ K + TL A+L YC GL E + F+ G+ P Y ++ Y K
Sbjct: 545 EMEKANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILPSVMCYCMMLALYAK 602
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 158/377 (41%), Gaps = 50/377 (13%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ + VFR MQ +A+ YS L+ + GK G+ LF EM+ S PD YN L
Sbjct: 328 EAMGVFRQMQAAGC-VANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNIL 386
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA--------------- 231
I + + + F M E +PN+ TY L+ AC
Sbjct: 387 IQVF----GEGGYFKEVVTLFHDM-AEENVEPNMQTYEGLIFACGKGGLYEDAKKILLHM 441
Query: 232 --------------------QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMI 271
QA ++ +F ++E P + TYN ++ A+ + G+
Sbjct: 442 NEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLY 501
Query: 272 KEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM 331
KE E++LSRM + K D+ +FN +I+++ + +++ + + + + +P T ++
Sbjct: 502 KEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSYVEMEKANCEPNELTLEAV 561
Query: 332 IINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGK 391
+ Y A L + E FQ++ A PS + Y ++ +Y D ++ A + D +
Sbjct: 562 LSIYCSAGLVDEGEEQFQEIKASGILPSVMCYCMMLALYAKNDRLNDAYNLIDAMIT--- 618
Query: 392 DMKVSTLNAMLEAYCMNGLPTEA-----DLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
M+VS ++ ++ E+ + +F+ ++ G Y L +A +
Sbjct: 619 -MRVSDIHQVIGQMIKGDFDDESNWQIVEYVFDKLNSEGCGLGMRFYNALLEALWCMFQR 677
Query: 447 ELVQKLLKRMEQNGIVP 463
E ++L + G+ P
Sbjct: 678 ERAARVLNEASKRGLFP 694
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 163/317 (51%), Gaps = 5/317 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS L+ +G++G TR M L EM++ G RP+ Y I A +A+ + A G F
Sbjct: 238 YSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRA----LGRARRIDDAWGIF 293
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M E C P+++TY +L+ A A +D+ L+ ++ S +PD TY +MD +GK
Sbjct: 294 KEMDD-EGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGK 352
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G ++ ++ + M+ + PD++T+ +LI++ K D+ + + P L T
Sbjct: 353 VGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHT 412
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N+MI KAR +A + + M ++ P+ +Y I YG + ++A + F+ +
Sbjct: 413 YNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMK 472
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
K G ++ NA L G +EA+ +F + H G++PDS TY +L K Y+KA +
Sbjct: 473 KRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQID 532
Query: 448 LVQKLLKRMEQNGIVPN 464
+LL M G P+
Sbjct: 533 KATQLLSEMISKGCEPD 549
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 164/365 (44%), Gaps = 8/365 (2%)
Query: 106 VVRSEHCFL-LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLA 164
V + +H L L + L K K L VF K Y+ L+ + T A
Sbjct: 756 VCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKA 815
Query: 165 MWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYN 224
+ LF +M+++G P+ YN L+ AH K+K + K + +M+ C+PN +T+N
Sbjct: 816 LELFEDMKSAGTHPNNFTYNLLLDAH----GKSKRINKLYDLYSEMRS-RGCEPNAITHN 870
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
I++ A ++ N+++ L+ EL +P TY ++D K G ++ + M
Sbjct: 871 IIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDY 930
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG-KARLQGK 343
C P+ + +N+LI+ +GK D ++FK ++ +P L ++ ++ R+
Sbjct: 931 GCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEA 990
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
+Y F+++ P ++Y II G + A +F E+ G + T NA++
Sbjct: 991 VQY-FEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALIL 1049
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
+ G A ++E +G+ P TY L + ++ + K+ + K+M G P
Sbjct: 1050 HLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSP 1109
Query: 464 NKRFF 468
N F
Sbjct: 1110 NTETF 1114
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 171/368 (46%), Gaps = 23/368 (6%)
Query: 95 PLVRTLNKYVKVVRSEHCF-----------------LLFEELGKSDKWLQCLEVFRWMQK 137
PL++ L K K + +++ F L + L S+ + LE+F M+
Sbjct: 765 PLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKS 824
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+ + Y+ L+ GK + L+SEMR+ GC P+ +N +I+A + + +
Sbjct: 825 AGTH-PNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLN 883
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
KAL Y++ M G P TY L+ +A +Q +F+E+ + P+
Sbjct: 884 KALDL---YYELMSG--DFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVI 938
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN +++ +GK+G I + +M +PD+ ++ +L++ D+ Q F+ L
Sbjct: 939 YNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELK 998
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
+ P ++N +I GK+R +A +F +M +P TY +I G V
Sbjct: 999 LTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVD 1058
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
A ++++EL +G + V T NA++ + ++G +A +F+ +G +P++ T+ L
Sbjct: 1059 VAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLP 1118
Query: 438 KAYTKANM 445
Y +A +
Sbjct: 1119 NKYPRAGL 1126
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 175/399 (43%), Gaps = 15/399 (3%)
Query: 72 RKSEELESKELVRVLMRSFSDKEP------LVRTLNKYVKVVRSEHCFLLFEELGKSDKW 125
+K++ S+E V +++S SD +V L +V ++ C + E L + +
Sbjct: 90 KKNKTSVSEEEVMTILKSISDPNSAFSYFKIVSQLTNFVHT--TDACNYMLEILREQRRI 147
Query: 126 LQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
+ VF MQK+ Y + Y + + KG A + +M G + YN
Sbjct: 148 EDMVFVFDLMQKKVIY-RNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNG 206
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
LI HL +AL +++M E KP++ TY+ L+ A + + ++ L +E
Sbjct: 207 LI--HLLLPGFCN---EALKVYKRMIS-EGMKPSMKTYSALMVALGRRGDTRKIMNLLEE 260
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ L P+IYTY + A G+ I + + M C PD+IT+ +LID+
Sbjct: 261 MKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGK 320
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
DK ++++ + S P T+ +++ +GK + + +M Y P +TY
Sbjct: 321 LDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTI 380
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+I +V RA ++ D ++ G + T N M+ EA L EN ++G
Sbjct: 381 LIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLG 440
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
V P + +Y L Y K+ + M++ GI+P+
Sbjct: 441 VKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPS 479
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 176/429 (41%), Gaps = 45/429 (10%)
Query: 85 VLMRSFSDKEPLVRTLNKYVKVVRSEHC------FLLFEELGKSDKWLQCLEVFRWMQKQ 138
VL+ + L + YVK+ S H L ++ GK L+ ++ F +
Sbjct: 310 VLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGD-LETVKRFWNEMEV 368
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
Y D Y+ LI + K G A + M G P+ YN +I L R +
Sbjct: 369 DGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDE 428
Query: 199 AL-------------------------------AKALGYFQKMKGMERCKPNIVTYNILL 227
AL AKA+ F+ MK P+I N L
Sbjct: 429 ALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKK-RGIMPSIAACNASL 487
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
A+ + + +F +LH+ L+PD TYN +M Y K G I + +LS M S C+
Sbjct: 488 YTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCE 547
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
PD++ N LI++ K D ++F L + K PT+ T+N ++ GK KA +
Sbjct: 548 PDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALEL 607
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F MT P+ IT+ ++ D V A ++F ++ + + V T N ++
Sbjct: 608 FGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIR 667
Query: 408 NGLPTEADLLFENSHNMG--VTPDSSTYKLLYKAYTK-ANMKELVQKLLKRMEQNGIVPN 464
G D F H M ++PD T L + +++ ++ +++ + Q + N
Sbjct: 668 EG---RIDYAFWFFHQMKKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTN 724
Query: 465 KRFFLEALE 473
+F+ E +E
Sbjct: 725 SQFWGELME 733
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 134/292 (45%), Gaps = 5/292 (1%)
Query: 173 NSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
NS C+ D V LI L R KA F K G+ P + +YN L+
Sbjct: 754 NSVCQDD-HVMLPLIKV-LCKRKKALDAQNVFDKFTKNLGIH---PTLESYNCLMDGLLG 808
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+ ++ LF+++ + P+ +TYN ++DA+GK+ I ++ + S M+S C+P+ IT
Sbjct: 809 SNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAIT 868
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
N++I + K +K ++ LM PT T+ +I KA +A +F++M
Sbjct: 869 HNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEML 928
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
P+ + Y +I +G + A E+F ++ K G + + ++E C+ G
Sbjct: 929 DYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRID 988
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA FE G+ PD+ +Y + K+ + L M+ GI P+
Sbjct: 989 EAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPD 1040
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 147/363 (40%), Gaps = 30/363 (8%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKAL----- 200
Y+ I +G+ + A +F EM + GC PD Y LI A DKAK L
Sbjct: 273 YTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMR 332
Query: 201 -----------AKALGYFQKMKGMERCK------------PNIVTYNILLRACAQARNVD 237
+ F K+ +E K P++VTY IL+ A ++ +VD
Sbjct: 333 ASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVD 392
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ + + + P+++TYN ++ K + E +L M+S KP ++ L I
Sbjct: 393 RAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFI 452
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
D YGK K F+++ P++ N+ + + +AE +F + +
Sbjct: 453 DYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLS 512
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P +TY ++ Y + +A ++ E+ G + V +N+++ G A +
Sbjct: 513 PDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKM 572
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
F N+ + P TY +L K +L M ++G PN F L+ S
Sbjct: 573 FGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSK 632
Query: 478 SLA 480
+ A
Sbjct: 633 NDA 635
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 148/369 (40%), Gaps = 45/369 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ +GK+G+ A+ LF M SGC P+ +N+L L K A+ AL F
Sbjct: 588 YNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSL----LDCLSKNDAVDLALKMF 643
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M M C P+++TYN ++ + +D F ++ + L+PD T ++ +
Sbjct: 644 CRMT-MMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM-KKFLSPDYVTLCTLIPGVVR 701
Query: 268 NGMIKE------------------------MESVLSRMKSNQ-------------CKPDI 290
+G +++ ME +L+ + + C+ D
Sbjct: 702 HGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDH 761
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
+ L+ +++A D K + PTL ++N ++ + KA +F+
Sbjct: 762 VMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFED 821
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM-NG 409
M + P+ TY ++ +G +++ +++ E+ G + T N ++ A N
Sbjct: 822 MKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNN 881
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFL 469
L DL +E +P TY L KA E K+ + M G PN +
Sbjct: 882 LNKALDLYYELMSG-DFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYN 940
Query: 470 EALETFSSS 478
+ F S
Sbjct: 941 ILINGFGKS 949
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 5/128 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT Y+ +I +GK + A+ LFSEM+N G PD YNALI HL K K
Sbjct: 1005 DTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALIL-HLGIAGKVDVAVKM 1063
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
Q + G+E P++ TYN L+R + + N DQ ++FK++ +P+ T+ + +
Sbjct: 1064 YEELQ-LVGLE---PSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPN 1119
Query: 264 AYGKNGMI 271
Y + G++
Sbjct: 1120 KYPRAGLV 1127
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 112/276 (40%), Gaps = 1/276 (0%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A YF+ + + N +L + R ++ + +F + + ++ ++ TY +
Sbjct: 114 AFSYFKIVSQLTNFVHTTDACNYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIF 173
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
A G I L +M + ++N LI + + +V+K ++ K
Sbjct: 174 KALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLLPGFCNEAL-KVYKRMISEGMK 232
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P++ T++++++ G+ K + ++M ++ P+ TY I G + A I
Sbjct: 233 PSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGI 292
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
F E+ G V T +++A C G +A L+ +PD TY L + K
Sbjct: 293 FKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGK 352
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
E V++ ME +G P+ + +E S
Sbjct: 353 VGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKS 388
>gi|297820044|ref|XP_002877905.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323743|gb|EFH54164.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 439
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 172/363 (47%), Gaps = 16/363 (4%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
+E K ++W L++F ++KQ WY Y+KL V+G Q A LF M + G
Sbjct: 65 LDEAIKENRWQSALKIFHLLRKQHWYEPKCKTYTKLFKVLGNCKQPDQASLLFEVMLSEG 124
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
+P VY +LI + K++ L KA + MK + CKP++ T+ +L+R C +
Sbjct: 125 LKPTIDVYTSLIAVY----GKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLIRCCCKLGR 180
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFN 294
D V + E+ + TYN ++D YGK GM +EME+VL+ M + PD+ T N
Sbjct: 181 FDLVKRIILEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMENVLADMIEDGDSLPDVFTLN 240
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+I S E V E P + TFN +I+++GKA + K V M
Sbjct: 241 SIIGSS---------EMVAHE--EDGELPDITTFNILILSFGKAGMYKKMSSVMDFMEKR 289
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
++ + +TY +I +G + + ++F ++ G + +++ AY GL +
Sbjct: 290 FFSLTTVTYNIVIETFGKAGKIEKMDDVFRKMKYQGVKPNSISYCSLVNAYSKAGLVGKI 349
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
D + N V D+ + + AY +A +++L +ME+ P+K F ++T
Sbjct: 350 DSILRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKT 409
Query: 475 FSS 477
+ +
Sbjct: 410 YKA 412
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 100/189 (52%), Gaps = 11/189 (5%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+I T+NIL+ + +A +++++ + + + TYN V++ +GK G I++M+ V
Sbjct: 258 PDITTFNILILSFGKAGMYKKMSSVMDFMEKRFFSLTTVTYNIVIETFGKAGKIEKMDDV 317
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
+MK KP+ I++ L+++Y K K++ + + +++S P FN +I YG+
Sbjct: 318 FRKMKYQGVKPNSISYCSLVNAYSKAGLVGKIDSILRQIVNSDVVLDTPFFNCIINAYGQ 377
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
A + ++ +M K P IT+ +I Y +A IFD + +L K M +ST
Sbjct: 378 AGDLATMKELYIQMEERKCKPDKITFATMIKTY-------KAHGIFDAVQELEKQM-IST 429
Query: 398 ---LNAMLE 403
L+ +LE
Sbjct: 430 GENLDILLE 438
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 126/282 (44%), Gaps = 14/282 (4%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
AL F ++ +P TY L + + DQ + LF+ + L P I Y ++
Sbjct: 77 ALKIFHLLRKQHWYEPKCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLI 136
Query: 263 DAYGKNGMIKEMESVLSRMKS-NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
YGK+ ++ + S L MKS + CKPD+ TF +LI K FD ++++ + +
Sbjct: 137 AVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLIRCCCKLGRFDLVKRIILEMSYLGV 196
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT-PSFITYECIITMYGYCDNVSRAR 380
+ T+N++I YGKA + + E V M + P T II G + V+
Sbjct: 197 GCSTVTYNTIIDGYGKAGMFEEMENVLADMIEDGDSLPDVFTLNSII---GSSEMVAHEE 253
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ G+ ++T N ++ ++ G+ + + + + + TY ++ + +
Sbjct: 254 D--------GELPDITTFNILILSFGKAGMYKKMSSVMDFMEKRFFSLTTVTYNIVIETF 305
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS-SSLAG 481
KA E + + ++M+ G+ PN + + +S + L G
Sbjct: 306 GKAGKIEKMDDVFRKMKYQGVKPNSISYCSLVNAYSKAGLVG 347
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 91/180 (50%), Gaps = 5/180 (2%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ D ++ LI GK G + + M YN +I T KA +
Sbjct: 257 LPDITTFNILILSFGKAGMYKKMSSVMDFMEKRFFSLTTVTYNIVI----ETFGKAGKIE 312
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
K F+KMK + KPN ++Y L+ A ++A V +++++ +++ S + D +N +
Sbjct: 313 KMDDVFRKMK-YQGVKPNSISYCSLVNAYSKAGLVGKIDSILRQIVNSDVVLDTPFFNCI 371
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
++AYG+ G + M+ + +M+ +CKPD ITF +I +Y FD ++++ K ++ + E
Sbjct: 372 INAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYKAHGIFDAVQELEKQMISTGE 431
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 71/167 (42%), Gaps = 5/167 (2%)
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
+P T+ + G + +A +F+ M + P+ Y +I +YG + + +A
Sbjct: 91 EPKCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLIAVYGKSELLDKAFS 150
Query: 382 IFDELSKLGKDMK--VSTLNAMLEAYCMNG-LPTEADLLFENSHNMGVTPDSSTYKLLYK 438
+ + + D K V T ++ C G ++ E S+ +GV + TY +
Sbjct: 151 TLEYMKSVS-DCKPDVFTFTVLIRCCCKLGRFDLVKRIILEMSY-LGVGCSTVTYNTIID 208
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSG 485
Y KA M E ++ +L M ++G F L ++ S +A + G
Sbjct: 209 GYGKAGMFEEMENVLADMIEDGDSLPDVFTLNSIIGSSEMVAHEEDG 255
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 189/412 (45%), Gaps = 39/412 (9%)
Query: 101 NKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQ 160
++ V++ ++ CF++ + +G+ + W + EV+ W+ + WY + + S ++AV+GK Q
Sbjct: 180 DRKVQMTPTDFCFVV-KSVGQ-ESWHRAFEVYEWLNLRHWYSPNARMLSTILAVLGKANQ 237
Query: 161 TRLAMWLFSE----------------------------------MRNSGCRPDPSVYNAL 186
LA+ +F+ MR GC PD +N L
Sbjct: 238 EPLAVEVFTRAEPSVENTVKVYNAMMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTL 297
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I A L + LA L + G+ +P+I+TYN L+ AC++A N+++ +F ++
Sbjct: 298 INARLKAGEMTPNLAIELLTEVRRSGL---RPDIITYNTLISACSRASNLEEAVNVFDDM 354
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
PD++TYN ++ YG+ G+ + E + + ++S PD +++N + ++ +
Sbjct: 355 VAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNV 414
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+K++ + + ++ T+N+MI YGK A +++ M + P ITY +
Sbjct: 415 EKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVL 474
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I G + + A + E+ G + T +A++ Y G P EA+ F+ G
Sbjct: 475 IDSLGKTNKIEEAAGMMSEMLNTGVKPTLRTYSALICGYAKAGKPVEAEETFDCMLRSGT 534
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
PD Y ++ + + N + K M +GI+P + L T ++
Sbjct: 535 RPDQLAYSVMLDIHLRFNEPKRAMTFYKEMIHDGIMPEHSLYELMLRTLGNA 586
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 157/341 (46%), Gaps = 8/341 (2%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQ--TRLAMWLFSEMRNSGCR 177
+S K+ + E+F M ++R D ++ LI K G+ LA+ L +E+R SG R
Sbjct: 267 ARSGKFNKVQELFDLM-RERGCEPDLVSFNTLINARLKAGEMTPNLAIELLTEVRRSGLR 325
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
PD YN LI+A +A L +A+ F M C+P++ TYN ++ +
Sbjct: 326 PDIITYNTLISAC----SRASNLEEAVNVFDDMVA-HHCEPDLWTYNAMISVYGRCGLSG 380
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ LF +L PD +YN + A+ + G +++++ + M D +T+N +I
Sbjct: 381 KAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMI 440
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
YGK+ D Q+++ + S P + T+ +I + GK +A + +M
Sbjct: 441 HMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVK 500
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P+ TY +I Y A E FD + + G + ML+ + P A
Sbjct: 501 PTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQLAYSVMLDIHLRFNEPKRAMTF 560
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
++ + G+ P+ S Y+L+ + AN E + ++++ ME+
Sbjct: 561 YKEMIHDGIMPEHSLYELMLRTLGNANKVEDIGRVVRDMEE 601
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 154/344 (44%), Gaps = 6/344 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ E G+ W Q E +Q + +++ LI G A +F+ M
Sbjct: 786 VIEAYGRLKLW-QKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARAVFNTMMKD 844
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P N L+ A L + + L + Q + G + K +I+ ++L A A+A
Sbjct: 845 GPSPTVDSINGLLQA-LIVDGRLEELYVVVQELQDI-GFKISKSSIL---LMLDAFARAG 899
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
N+ +V ++ + + P ++ Y + + ++++E++LS M+ KPD+ +N
Sbjct: 900 NIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWN 959
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++ Y F K Q+++ + +P T+N +I+ Y + + + +M +
Sbjct: 960 SVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTV 1019
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P TY+ ++ +G V +A E+F+EL G + S + M++ Y +G ++A
Sbjct: 1020 GLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKA 1079
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
LF + GV P +T LL +Y + + +K+L +++
Sbjct: 1080 QRLFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKE 1123
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/267 (17%), Positives = 124/267 (46%), Gaps = 2/267 (0%)
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
+N L+ A A + ++ A+F + + +P + + NG++ A +G ++E+ V+ +
Sbjct: 817 VWNALIEAYAASGCYERARAVFNTMMKDGPSPTVDSINGLLQALIVDGRLEELYVVVQEL 876
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
+ K + L++D++ + ++++++ + + P++ + M + +
Sbjct: 877 QDIGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQV 936
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
E + +M + P + ++ MY D+ + +I+ + + G + T N +
Sbjct: 937 RDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNIL 996
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ YC + P E +L + +G+ P TYK L ++ K + E ++L + ++ G
Sbjct: 997 IVMYCRDHRPKEGLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGC 1056
Query: 462 VPNKRFFLEALETFSSSLAGSQSGSAK 488
++ F+ ++ + +S GS S + +
Sbjct: 1057 KLDRSFYHIMMKIYRNS--GSHSKAQR 1081
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 131/313 (41%), Gaps = 5/313 (1%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
++ M+ +G P +Y + A L R K +A+ + G KP++ +N +
Sbjct: 907 IYHGMKAAGYFPSMHLYR--VMAQLLCRGKQVRDVEAMLSEMEEAGF---KPDLSIWNSV 961
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
L+ + + +++ + E L PD TYN ++ Y ++ KE ++ M++
Sbjct: 962 LKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGL 1021
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
+P + T+ L+ S+GK+Q ++ E++F+ L + K ++ M+ Y + KA+
Sbjct: 1022 EPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQR 1081
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+F M P+ T ++ YG A ++ L + ++ +++++AY
Sbjct: 1082 LFSMMKDEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETDANLSTLPYSSVIDAYV 1141
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
NG + G+ PD + +A + + LL + G R
Sbjct: 1142 RNGDYNAGIQKLKQVKEEGLEPDHRIWTCFIRAASLSQHTSEAILLLNALRDTGFDLPIR 1201
Query: 467 FFLEALETFSSSL 479
E E S+L
Sbjct: 1202 LLTEKPEPLVSAL 1214
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 122/273 (44%), Gaps = 29/273 (10%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ +I+V G+ G + A LF+++ + G PD YN+ + A
Sbjct: 362 DLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFARE---------- 411
Query: 204 LGYFQKMKGMERCKPNI--------VTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
G +K+K + C+ + +TYN ++ + D L++++ S PD+
Sbjct: 412 -GNVEKVKDI--CEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDV 468
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
TY ++D+ GK I+E ++S M + KP + T++ LI Y K + E+ F
Sbjct: 469 ITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKPTLRTYSALICGYAKAGKPVEAEETFDC 528
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
++ S +P ++ M+ + + +A +++M P YE ++ G +
Sbjct: 529 MLRSGTRPDQLAYSVMLDIHLRFNEPKRAMTFYKEMIHDGIMPEHSLYELMLRTLGNANK 588
Query: 376 VSRAREIFDELSKLGKDM-KVSTLNAMLEAYCM 407
V +++ ++ +DM +V +N +Y +
Sbjct: 589 V-------EDIGRVVRDMEEVCGMNPQAISYIL 614
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 129/320 (40%), Gaps = 16/320 (5%)
Query: 109 SEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLF 168
S H + + +L K ++ +E ++ + D I++ ++ + R ++
Sbjct: 919 SMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIDDFRKTTQIY 978
Query: 169 SEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLR 228
++ G PD YN LI ++ RD L + G+E P + TY L+
Sbjct: 979 QRIKEDGLEPDEDTYNILIV--MYCRDHRPKEGLVLMDEMRTVGLE---PKLDTYKSLVA 1033
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
+ + + V+Q LF+EL + D Y+ +M Y +G + + + S MK +P
Sbjct: 1034 SFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSMMKDEGVEP 1093
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
I T +LL+ SYG + E+V +L + + ++S+I Y + G
Sbjct: 1094 TIATMHLLMVSYGSSGQPQEAEKVLSNLKETDANLSTLPYSSVIDAYVR---NGDYNAGI 1150
Query: 349 QKMTAMK---YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
QK+ +K P + C I + S A + + L G D+ + L E
Sbjct: 1151 QKLKQVKEEGLEPDHRIWTCFIRAASLSQHTSEAILLLNALRDTGFDLPIRLLTEKPEP- 1209
Query: 406 CMNGLPTEADLLFENSHNMG 425
L + DL E +G
Sbjct: 1210 ----LVSALDLCLEMLETLG 1225
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 158/383 (41%), Gaps = 45/383 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI------YSKLIAVMGKKGQTRLAMWL 167
+L + LGK++K +E M + + +TG+ YS LI K G+ A
Sbjct: 473 VLIDSLGKTNK----IEEAAGMMSE---MLNTGVKPTLRTYSALICGYAKAGKPVEAEET 525
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
F M SG RPD Y+ ++ HL + +A+ F K + P Y ++L
Sbjct: 526 FDCMLRSGTRPDQLAYSVMLDIHLRFNEPKRAMT-----FYKEMIHDGIMPEHSLYELML 580
Query: 228 RACAQARNVDQVNALFKELHESI-LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
R A V+ + + +++ E + P +Y V K E +L R S++
Sbjct: 581 RTLGNANKVEDIGRVVRDMEEVCGMNPQAISYILV-----KGDCYDEAAKMLRRAISDRY 635
Query: 287 KPD---IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+ D +++ S G+ + ++ K H+ + T ++++ KA+
Sbjct: 636 EIDRENLLSILSSYSSSGRHSVALDLLELLKE--HTPRSSQMIT-EALVVMLCKAQQLDT 692
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA--- 400
A + + +T SF +E +I E+F E S++ DM+ + A
Sbjct: 693 ALKEYSNSRELGFTGSFTMFEALI-------QCCLENELFTEASQVFSDMRFCGIKASEC 745
Query: 401 ----MLEAYCMNGLPTEADLLFENSHNMG-VTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
M+ YC G P A L + + G V + S Y + +AY + + + + +
Sbjct: 746 LYQSMMLLYCKMGFPETAHHLIDLTETDGTVLNNISVYVDVIEAYGRLKLWQKAESVAGN 805
Query: 456 MEQNGIVPNKRFFLEALETFSSS 478
M Q+ I N++ + +E +++S
Sbjct: 806 MRQSCITVNRKVWNALIEAYAAS 828
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%)
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ + +I YG+ +L KAE V M T + + +I Y RAR +F+
Sbjct: 780 ISVYVDVIEAYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAYAASGCYERARAVFN 839
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ K G V ++N +L+A ++G E ++ + ++G S+ L+ A+ +A
Sbjct: 840 TMMKDGPSPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARAG 899
Query: 445 MKELVQKLLKRMEQNGIVPNKRFF 468
V+K+ M+ G P+ +
Sbjct: 900 NIFEVKKIYHGMKAAGYFPSMHLY 923
>gi|224069806|ref|XP_002303044.1| predicted protein [Populus trichocarpa]
gi|222844770|gb|EEE82317.1| predicted protein [Populus trichocarpa]
Length = 485
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 166/352 (47%), Gaps = 27/352 (7%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W LEVF +++Q WY G+Y KLI ++GK Q A LF M + GC Y
Sbjct: 119 RWASALEVFELLREQLWYRPYAGMYVKLIVMLGKCKQPDKAHQLFQAMIDEGCAVTHESY 178
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL- 242
AL++A+ ++ KA ++MK C+P++ TY+IL+++C Q D+V L
Sbjct: 179 TALLSAY----GRSGLFDKAFSIMEEMKNTPDCRPDVHTYSILIKSCLQVFAFDKVQVLL 234
Query: 243 --------------FKELHESIL--------APDIYTYNGVMDAYGKNGMIKEMESVLSR 280
F E+ +++ PD++T N + A+G +G ++ ME+ +
Sbjct: 235 SDMESLGIRPNTVTFAEMEATLMEMLSQQDCEPDVWTMNSTIRAFGGSGQMEMMENCYEK 294
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
+S +P+I TFN+L+DSYGK + KM V + + T+ T+N +I +G+A
Sbjct: 295 FQSAGIEPNIKTFNILLDSYGKAGNYQKMSAVMEYMQRYHYSWTIVTYNVVIDAFGRAGD 354
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
+ EY+F+ M + + PS +T ++ Y + + + + N
Sbjct: 355 LKQMEYLFRLMRSERIKPSCVTLCSLVRAYREAGKPEKIGSVLRFIENSDVTLDTVFFNC 414
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
+++AY E + E G PD TY+ + KAY+ M +KL
Sbjct: 415 LVDAYGRLECFAEMKEVLELMEEKGCKPDKVTYRTMIKAYSIKGMTSHAKKL 466
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 55/126 (43%), Gaps = 1/126 (0%)
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
Y P Y +I M G C +A ++F + G + + A+L AY +GL +A
Sbjct: 136 YRPYAGMYVKLIVMLGKCKQPDKAHQLFQAMIDEGCAVTHESYTALLSAYGRSGLFDKAF 195
Query: 416 LLFENSHNM-GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
+ E N PD TY +L K+ + + VQ LL ME GI PN F E T
Sbjct: 196 SIMEEMKNTPDCRPDVHTYSILIKSCLQVFAFDKVQVLLSDMESLGIRPNTVTFAEMEAT 255
Query: 475 FSSSLA 480
L+
Sbjct: 256 LMEMLS 261
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 15/185 (8%)
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
LI GK + DK Q+F++++ T ++ +++ YG++ L KA F M MK
Sbjct: 146 LIVMLGKCKQPDKAHQLFQAMIDEGCAVTHESYTALLSAYGRSGLFDKA---FSIMEEMK 202
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIF--DELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
TP +C ++ Y + ++F D++ L DM+ + + E
Sbjct: 203 NTP-----DCRPDVHTYSILIKSCLQVFAFDKVQVLLSDMESLGIRPNTVTFA----EME 253
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
A L+ E PD T +A+ + E+++ ++ + GI PN + F L+
Sbjct: 254 ATLM-EMLSQQDCEPDVWTMNSTIRAFGGSGQMEMMENCYEKFQSAGIEPNIKTFNILLD 312
Query: 474 TFSSS 478
++ +
Sbjct: 313 SYGKA 317
>gi|224099036|ref|XP_002311357.1| predicted protein [Populus trichocarpa]
gi|222851177|gb|EEE88724.1| predicted protein [Populus trichocarpa]
Length = 369
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 175/348 (50%), Gaps = 9/348 (2%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
+F +++Q +Y Y KL+ ++G+ GQ + A +F EM G P Y AL+ A+
Sbjct: 1 MFEMLKEQPFYQPKEATYMKLLVLLGRCGQPQRAHQIFDEMIEEGIEPTSEFYTALLAAY 60
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
+ + + +MK + RC+P++ TY+ LL+AC A + ++ L++E+ E +
Sbjct: 61 C----RNNLIEEGFSIINQMKTVPRCQPDVYTYSTLLKACVDASRFELIDILYQEMDERL 116
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGKRQAFDKM 309
++P+ T N V+ +GK GM +ME VLS M +S CKPD+ T N+++ +G + D M
Sbjct: 117 ISPNTVTQNIVLSGFGKVGMYDQMERVLSGMLESKTCKPDVWTMNIILSVFGNKGHVDLM 176
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
E+ ++ + +P TFN +I YGK R+ V + M +++ + TY +I
Sbjct: 177 ERWYEKFRNFGIEPETRTFNILIGAYGKKRMYDNMSSVMEYMRKLQFPWTTSTYNNVIEA 236
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVS--TLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
+ + FD++ +DMK T ++ Y GL + + + +
Sbjct: 237 FADVGDAKNMEYTFDQMR--AEDMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIP 294
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
++S YK + A KA+ ++++ K+M+ +P+ R + +E +
Sbjct: 295 ENTSLYKAVISACAKADDLVEMERVFKQMKDKQCLPDSRTYSIMVEAY 342
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/241 (20%), Positives = 99/241 (41%), Gaps = 5/241 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ GK + Q V M + + D + +++V G KG L + + RN
Sbjct: 126 IVLSGFGKVGMYDQMERVLSGMLESKTCKPDVWTMNIILSVFGNKGHVDLMERWYEKFRN 185
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G P+ +N LI A+ R ++ + Y +K++ TYN ++ A A
Sbjct: 186 FGIEPETRTFNILIGAYGKKR-MYDNMSSVMEYMRKLQ----FPWTTSTYNNVIEAFADV 240
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ + F ++ + D T+ +++ Y G+ ++ S + + + +
Sbjct: 241 GDAKNMEYTFDQMRAEDMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTSLY 300
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+I + K +ME+VFK + + P T++ M+ Y K + K Y+ Q+
Sbjct: 301 KAVISACAKADDLVEMERVFKQMKDKQCLPDSRTYSIMVEAYRKEGMNDKIYYLEQEKQK 360
Query: 354 M 354
M
Sbjct: 361 M 361
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 192/412 (46%), Gaps = 45/412 (10%)
Query: 101 NKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQ 160
++ V++ ++ CF++ + +G+ + W + LEV+ W+ + WY + + S +++V+GK Q
Sbjct: 178 DRKVQMTPTDLCFVV-KSVGQ-ESWHRALEVYEWLNLRHWYSPNARMLSTILSVLGKANQ 235
Query: 161 TRLAMWLFSE----------------------------------MRNSGCRPDPSVYNAL 186
LA+ +F MR GC+PD +N L
Sbjct: 236 EALAVEVFMRAEPSAGNTVQVYNAMMGVYARRGRFNKVQELLDLMRERGCKPDLVSFNTL 295
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I A L LA L + G+ +P+ +TYN L+ AC++A N+++ +F ++
Sbjct: 296 INARLKAGAMMPNLAIELLNEVRRSGL---RPDTITYNTLISACSRASNLEEAAKVFDDM 352
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
PD++TYN ++ YG+ G+ + E + + ++S PD +++N L+ ++ +
Sbjct: 353 EAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNV 412
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ---KMTAMKYTPSFITY 363
+K++++++ ++ T+N+MI YGK QG+ E Q M + P +TY
Sbjct: 413 EKVKEIWEEMVKIGFGKDEMTYNTMIHMYGK---QGQNELALQLYRDMQSSGRNPDAVTY 469
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+I G + ++ A + E+ G + T +A++ Y G P EA+ F+
Sbjct: 470 TVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGYAKAGKPVEAEETFDCMLR 529
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
G+ PD Y ++ + + N + L K M +GI + + L T
Sbjct: 530 SGIRPDHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDGITLDHSLYELMLRTL 581
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 167/378 (44%), Gaps = 20/378 (5%)
Query: 83 VRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYI 142
V V MR+ V+ N + V + G+ +K + L++ R +R
Sbjct: 240 VEVFMRAEPSAGNTVQVYNAMMGV---------YARRGRFNKVQELLDLMR----ERGCK 286
Query: 143 ADTGIYSKLIAVMGKKG--QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
D ++ LI K G LA+ L +E+R SG RPD YN LI+A +A L
Sbjct: 287 PDLVSFNTLINARLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISAC----SRASNL 342
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+A F M+ C+P++ TYN ++ + + LF +L PD +YN
Sbjct: 343 EEAAKVFDDMEA-HHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNS 401
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ A+ + G +++++ + M D +T+N +I YGK+ + Q+++ + S
Sbjct: 402 LLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSG 461
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P T+ +I + GK +A V +M P+ TY +I Y A
Sbjct: 462 RNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGYAKAGKPVEAE 521
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
E FD + + G + ML+ + P A L++ + G+T D S Y+L+ +
Sbjct: 522 ETFDCMLRSGIRPDHLAYSVMLDIHLRFNEPKRAMTLYKEMLHDGITLDHSLYELMLRTL 581
Query: 441 TKANMKELVQKLLKRMEQ 458
K N E + ++++ ME+
Sbjct: 582 RKVNKVEDIGRVIRDMEE 599
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 164/365 (44%), Gaps = 15/365 (4%)
Query: 96 LVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVM 155
L+ ++ YV V+ E G+ W Q E +QR D +++ LI
Sbjct: 774 LLNNISLYVNVI---------EAYGRLKLW-QKAESVAGNLRQRCITVDRKVWNALIEAY 823
Query: 156 GKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER 215
G A +F+ M G P N L+ A L + L + Q M G +
Sbjct: 824 AASGCYERARAIFNTMMRDGPSPTVDTINGLLQA-LIVDGRLDELYVVVQELQDM-GFKI 881
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
K +I+ ++L A A+A N+ +V ++ + + P ++ Y + + ++++E
Sbjct: 882 SKSSIL---LMLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVE 938
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
++LS M+ KPD+ +N ++ Y + F K QV++ + +P T+N++I+ Y
Sbjct: 939 AMLSEMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMY 998
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
+ + + +M P TY+ ++ +G V +A E+F+EL G +
Sbjct: 999 CRDHRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDR 1058
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
S + M++ Y +G ++A+ LF + GV P +T LL +Y + + +K+L
Sbjct: 1059 SFYHTMMKIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLSN 1118
Query: 456 MEQNG 460
+++ G
Sbjct: 1119 LKETG 1123
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 134/313 (42%), Gaps = 5/313 (1%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
++ M+ +G P +Y + A L +R K +A+ + G KP++ +N +
Sbjct: 905 IYHGMKAAGYFPTMHLYR--VMARLLSRGKQVRDVEAMLSEMEEAGF---KPDLSIWNSV 959
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
L+ + + +++ + E L PD TYN ++ Y ++ +E S++ M+
Sbjct: 960 LKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGL 1019
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
+P + T+ L+ S+GK+Q ++ E++F+ L K +++M+ Y + KAE
Sbjct: 1020 EPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAER 1079
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+F M P+ T ++ YG A ++ L + G ++ +++++AY
Sbjct: 1080 LFSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETGSNLSTLPYSSVIDAYL 1139
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
NG G+ PD + +A + + LL ++ G R
Sbjct: 1140 RNGDYNIGIQKLIQMKKEGLEPDHRIWTCFIRAASLSRRTSEAIVLLNALQDAGFDLPIR 1199
Query: 467 FFLEALETFSSSL 479
E E+ S+L
Sbjct: 1200 LLTEKPESLVSAL 1212
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/354 (18%), Positives = 150/354 (42%), Gaps = 35/354 (9%)
Query: 167 LFSEMRNSGCRPDPSVYNALI----------TAHLHTRDKAKA-------------LAKA 203
+FS+MR G + S+Y +++ TAH H D A++ + +A
Sbjct: 729 VFSDMRFCGIKASESLYESMVLLYCKMGFPETAH-HLIDFAESDGILLNNISLYVNVIEA 787
Query: 204 LGYFQKMKGMERCKPNI---------VTYNILLRACAQARNVDQVNALFKELHESILAPD 254
G + + E N+ +N L+ A A + ++ A+F + +P
Sbjct: 788 YGRLKLWQKAESVAGNLRQRCITVDRKVWNALIEAYAASGCYERARAIFNTMMRDGPSPT 847
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
+ T NG++ A +G + E+ V+ ++ K + L++D++ + ++++++
Sbjct: 848 VDTINGLLQALIVDGRLDELYVVVQELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYH 907
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
+ + PT+ + M + + E + +M + P + ++ MY +
Sbjct: 908 GMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVAIE 967
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
+ + +++ + + G + T N ++ YC + P E L G+ P TYK
Sbjct: 968 DFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGLEPKLDTYK 1027
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAK 488
L ++ K + E ++L + ++ G ++ F+ ++ + +S GS S + +
Sbjct: 1028 SLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNS--GSHSKAER 1079
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 133/325 (40%), Gaps = 15/325 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSE-----MRNSGCRPDPSVYNALITAHLHTRDKAK 198
+ +Y +I G RL +W +E +R D V+NALI A+ +
Sbjct: 777 NISLYVNVIEAYG-----RLKLWQKAESVAGNLRQRCITVDRKVWNALIEAYA----ASG 827
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
+A F M + P + T N LL+A +D++ + +EL + +
Sbjct: 828 CYERARAIFNTMM-RDGPSPTVDTINGLLQALIVDGRLDELYVVVQELQDMGFKISKSSI 886
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
++DA+ + G I E++ + MK+ P + + ++ + + +E + +
Sbjct: 887 LLMLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEE 946
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
+ KP L +NS++ Y K V+Q++ P TY +I MY
Sbjct: 947 AGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEE 1006
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
+ E+ G + K+ T +++ ++ L +A+ LFE + G D S Y + K
Sbjct: 1007 GFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMK 1066
Query: 439 AYTKANMKELVQKLLKRMEQNGIVP 463
Y + ++L M+ G+ P
Sbjct: 1067 IYRNSGSHSKAERLFSMMKDAGVEP 1091
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 144/366 (39%), Gaps = 39/366 (10%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ +I + GK+GQ LA+ L+ +M++SG PD Y LI + K +A+A
Sbjct: 430 DEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLI----DSLGKTNKIAEA 485
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
G +M KP + TY+ L+ A+A + F + S + PD Y+ ++D
Sbjct: 486 AGVMSEMLNTG-VKPTLKTYSALICGYAKAGKPVEAEETFDCMLRSGIRPDHLAYSVMLD 544
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ + K ++ M + D + L++ + K + + +V + M
Sbjct: 545 IHLRFNEPKRAMTLYKEMLHDGITLDHSLYELMLRTLRKVNKVEDIGRVIRD-MEEICGM 603
Query: 324 TLPTFNSMIIN---YGKA--------------------------RLQGKAEYVFQKMTAM 354
T +S+++ Y +A G+ + +
Sbjct: 604 NTQTISSILVKGECYDEAAKMLRRAISDHFEIDRENLLSILSSYSSSGRHAEALDLLEFL 663
Query: 355 K-YTP--SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
K ++P S + E ++ M + A + + +LG + ++++ N L
Sbjct: 664 KEHSPRSSQMITEALVVMLCKAQQLDAALKEYSNNRELGFTGSFTMFESLIQCCLENELI 723
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK-RFFLE 470
TEA +F + G+ S Y+ + Y K E L+ E +GI+ N ++
Sbjct: 724 TEASQVFSDMRFCGIKASESLYESMVLLYCKMGFPETAHHLIDFAESDGILLNNISLYVN 783
Query: 471 ALETFS 476
+E +
Sbjct: 784 VIEAYG 789
>gi|356503440|ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Glycine max]
Length = 832
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 178/384 (46%), Gaps = 11/384 (2%)
Query: 85 VLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIAD 144
VL + SD + + LN++V ++ L +EL + C VFRW++ Q+ Y A
Sbjct: 91 VLSLNLSDDDDVDGLLNRWVGRFARKNFPFLIKELTQRGSIEHCNRVFRWLKNQKNYRAR 150
Query: 145 TGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKAL 204
IY+ +I + + +T A LF EM+ C+PD YNA+I AH +A A+
Sbjct: 151 NDIYNMMIRLHARHNRTDQARGLFFEMQEWRCKPDVETYNAIINAH----GRAGQWRWAM 206
Query: 205 GYFQKMKGMERCK--PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
M M R P+ TYN L+ AC + N + + K++ E+ + PD+ T+N ++
Sbjct: 207 NI---MDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIIL 263
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
A+ + S MK +PD T N++I K + +DK ++F S+ K +
Sbjct: 264 SAFKSGAQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIEIFNSMREKKSE 323
Query: 323 --PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P + TF S+I Y E F M A P+ ++Y +I Y + A
Sbjct: 324 CTPDVVTFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARGMDNEAH 383
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
F+E+ + G + + ++L AY + P +A +F+ + P+ +Y L AY
Sbjct: 384 LFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALIDAY 443
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
+ K+L+ MEQ GI PN
Sbjct: 444 GSNGLLADAIKILREMEQEGIQPN 467
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 130/309 (42%), Gaps = 37/309 (11%)
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F+ +K + + YN+++R A+ DQ LF E+ E PD+ TYN +++A+G
Sbjct: 138 FRWLKNQKNYRARNDIYNMMIRLHARHNRTDQARGLFFEMQEWRCKPDVETYNAIINAHG 197
Query: 267 K-----------------------------------NGMIKEMESVLSRMKSNQCKPDII 291
+ +G KE +V +M N PD++
Sbjct: 198 RAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLV 257
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
T N+++ ++ + K F+ + + +P T N +I K R KA +F M
Sbjct: 258 THNIILSAFKSGAQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIEIFNSM 317
Query: 352 TAMKY--TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
K TP +T+ II +Y C V F+ + G + + NA++ AY G
Sbjct: 318 REKKSECTPDVVTFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAYAARG 377
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFL 469
+ EA L F G PD +Y L AY ++ +++ RM++N + PN +
Sbjct: 378 MDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYN 437
Query: 470 EALETFSSS 478
++ + S+
Sbjct: 438 ALIDAYGSN 446
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 159/369 (43%), Gaps = 20/369 (5%)
Query: 95 PLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWM-QKQRWYIADTGIYSKLIA 153
P TLN + HC + + K+ +E+F M +K+ D ++ +I
Sbjct: 289 PDTTTLNIVI------HCLVKLRQYDKA------IEIFNSMREKKSECTPDVVTFTSIIH 336
Query: 154 VMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA-KALGYFQKMKG 212
+ GQ F+ M G +P+ YNALI A+ A+ + +A +F ++K
Sbjct: 337 LYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAY-----AARGMDNEAHLFFNEIK- 390
Query: 213 MERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIK 272
+P+IV+Y LL A +++ + +F + + L P++ +YN ++DAYG NG++
Sbjct: 391 QNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLA 450
Query: 273 EMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
+ +L M+ +P++++ L+ + G+ K++ V + K +N+ I
Sbjct: 451 DAIKILREMEQEGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEMRGIKLNTVAYNAAI 510
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKD 392
+ KA +++ M K +TY +I+ A +E+ L
Sbjct: 511 GSCMNVGEYDKAIGLYKSMRKKKIKTDSVTYTVLISGCCKMSKYGEALSFMEEIMHLKLP 570
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
+ ++ + AY G EA+ F + G PD TY + AY A E L
Sbjct: 571 LSKEVYSSAICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAENWEKAYAL 630
Query: 453 LKRMEQNGI 461
+ ME + I
Sbjct: 631 FEEMEASSI 639
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 140/322 (43%), Gaps = 14/322 (4%)
Query: 169 SEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLR 228
+EMR G + + YNA I + ++ + KA+G ++ M+ ++ K + VTY +L+
Sbjct: 494 AEMR--GIKLNTVAYNAAIGSCMNVGE----YDKAIGLYKSMRK-KKIKTDSVTYTVLIS 546
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
C + + + +E+ L Y+ + AY K G I E ES + MKS+ C P
Sbjct: 547 GCCKMSKYGEALSFMEEIMHLKLPLSKEVYSSAICAYSKQGQIVEAESTFNLMKSSGCYP 606
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
D++T+ ++D+Y + ++K +F+ + S K +++ ++ K G+ V
Sbjct: 607 DVVTYTAMLDAYNAAENWEKAYALFEEMEASSIKLDTIACAALMRSFNKGGQPGR---VL 663
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV---STLNAMLEAY 405
+M+ + M C + R D + + + V LN L +
Sbjct: 664 SLAESMREKEIPFSDTIFFEMVSACSILQDWRTAVDMIKYIEPSLPVISSGCLNQFLHSL 723
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+G LF G + +TY +L K + ++L+ ME GI P+K
Sbjct: 724 GKSGKIETMLKLFFKMLASGADVNLNTYSILLKNLLSSGNWRKYLEVLQWMEDAGIHPSK 783
Query: 466 RFFLEALETFSSSLAGSQSGSA 487
+ + + +FS G+++ +
Sbjct: 784 EMYHD-ISSFSQKCCGNENAAV 804
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 116/275 (42%), Gaps = 5/275 (1%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
KQ + D Y+ L+ G+ + A +F M+ + +P+ YNALI A+
Sbjct: 390 KQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALIDAY----GS 445
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
LA A+ ++M+ E +PN+V+ LL AC + +++ + + +
Sbjct: 446 NGLLADAIKILREME-QEGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEMRGIKLNTV 504
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
YN + + G + + M+ + K D +T+ +LI K + + + +
Sbjct: 505 AYNAAIGSCMNVGEYDKAIGLYKSMRKKKIKTDSVTYTVLISGCCKMSKYGEALSFMEEI 564
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
MH K + ++S I Y K +AE F M + P +TY ++ Y +N
Sbjct: 565 MHLKLPLSKEVYSSAICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAENW 624
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+A +F+E+ + A++ ++ G P
Sbjct: 625 EKAYALFEEMEASSIKLDTIACAALMRSFNKGGQP 659
>gi|168000162|ref|XP_001752785.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695948|gb|EDQ82289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 166/359 (46%), Gaps = 17/359 (4%)
Query: 123 DKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSV 182
+KW LEV W+++Q W+ ++ +IA GK GQ +A F+EMR G P+ +
Sbjct: 85 NKWTMVLEVLLWLKQQDWWNFGIHDFNLMIAAYGKLGQPGIAELSFTEMREVGLEPNVAC 144
Query: 183 YNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL 242
+ +L+ AH T + +A +Q+M P VTY + + A +A + +
Sbjct: 145 FTSLLEAHARTGN----FVRAESIYQEMLKTGPA-PTEVTYQVYINALCKAERFNDAERI 199
Query: 243 FKELHESILA-PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
FK L ES A PD YN ++ YGK G E +++ +MK ++TFN L+
Sbjct: 200 FKCLDESAEAKPDARLYNLMLHTYGKAGKFSEQQALFRQMKGAGVPMTVVTFNSLM---- 255
Query: 302 KRQAFDKM----EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
AF K E + + +K KP + T+ +I Y KAR +A VF++M A
Sbjct: 256 ---AFQKTVADAEACLRHMQAAKIKPDVITYTGLINAYSKARRVEEAHVVFREMVASGLR 312
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
PS I Y ++ Y C V A +F + + + + +L AY G +A+ L
Sbjct: 313 PSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPDIRSYTTLLAAYANTGNMKKAERL 372
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+ G+ P+ TY L + YT + + + + +++ GI PN F + TF
Sbjct: 373 LKRMKQAGLEPNVVTYGTLMQGYTSVHDINAMLQTFEDLQKAGIKPNSTIFTLLVRTFG 431
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 133/286 (46%), Gaps = 8/286 (2%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L K++++ +F+ + + D +Y+ ++ GK G+ LF +M+ +G
Sbjct: 187 LCKAERFNDAERIFKCLDESAEAKPDARLYNLMLHTYGKAGKFSEQQALFRQMKGAGVPM 246
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
+N+L+ K +A A + M+ + KP+++TY L+ A ++AR V++
Sbjct: 247 TVVTFNSLMAFQ-------KTVADAEACLRHMQAA-KIKPDVITYTGLINAYSKARRVEE 298
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+ +F+E+ S L P YN ++DAY K ++ ES+ M ++C+PDI ++ L+
Sbjct: 299 AHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDRCRPDIRSYTTLLA 358
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
+Y K E++ K + + +P + T+ +++ Y F+ + P
Sbjct: 359 AYANTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQGYTSVHDINAMLQTFEDLQKAGIKP 418
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
+ + ++ +G ++ A F ++ G + A+++A
Sbjct: 419 NSTIFTLLVRTFGQQEDFESALSWFKKMLDSGCPADQRSRAALMDA 464
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 32/222 (14%)
Query: 100 LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG 159
+N Y K R E ++F E+ S ++ R IA Y+ L+ K
Sbjct: 287 INAYSKARRVEEAHVVFREMVASG-----------LRPSR--IA----YNTLLDAYAKCK 329
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRD--KAKALAKALGYFQKMKGMERCK 217
+ A LF M CRPD Y L+ A+ +T + KA+ L K + K G+E
Sbjct: 330 EVEGAESLFKSMGQDRCRPDIRSYTTLLAAYANTGNMKKAERLLKRM----KQAGLE--- 382
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
PN+VTY L++ +++ + F++L ++ + P+ + ++ +G+ ++ ES
Sbjct: 383 PNVVTYGTLMQGYTSVHDINAMLQTFEDLQKAGIKPNSTIFTLLVRTFGQQ---EDFESA 439
Query: 278 LS---RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
LS +M + C D + L+D+ + ++ + F SL
Sbjct: 440 LSWFKKMLDSGCPADQRSRAALMDACQTSEQKQEVLEYFGSL 481
>gi|357509703|ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500155|gb|AES81358.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 855
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/471 (25%), Positives = 213/471 (45%), Gaps = 17/471 (3%)
Query: 4 TNLSPYSLRLSTLSSSSASSSS------SSSSSSFNQSSSQ--NYNFTHRHIPLSLRTRP 55
T SPY ++LS ++ S+ S SS+ +F + +Y+ H + +
Sbjct: 3 TTTSPYCIQLSGVTESTRPPKSTTTRKKSSNEVAFKEKKDGFVDYDRGHHQVSTKISGLR 62
Query: 56 RTGICCVWTRPRSKRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLL 115
+ I + R R R ++ E+V ++ S + ++ + LN+++ ++ L
Sbjct: 63 KEDIPAHY-RLRVAGNRFQKDWTVSEVVDSVL-SLTLRDDIEGLLNRWIGRFARKNFPFL 120
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
EL + C VF WM+ Q+ Y A T IY+ +I + + +T A LF EM+
Sbjct: 121 IRELTQRGSIEHCNLVFSWMKNQKNYCARTDIYNMMIRLHARHNRTDQARGLFFEMQKCR 180
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
C+PD YNALI AH +A A+ M P+ TYN L+ AC + N
Sbjct: 181 CKPDAETYNALINAH----GRAGQWRWAMNIMDDML-RAAIPPSRSTYNNLINACGSSGN 235
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
+ + K++ ++ + PD+ T+N ++ A+ + S +K +PD T N+
Sbjct: 236 WKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNI 295
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEK--PTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+I K + +DK +F S+ K + P + TF SMI Y E F M A
Sbjct: 296 IIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLA 355
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P+ ++Y ++ Y + A ++F+E+ + G V + ++L AY + P +
Sbjct: 356 EGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQK 415
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A +F+ + P+ +Y L AY + E ++L+ MEQ+ I PN
Sbjct: 416 AREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPN 466
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 147/335 (43%), Gaps = 18/335 (5%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIA-----VMGKKG-QTRLAMWLF 168
L G S W + L V + M D G+ L+ K G Q A+ F
Sbjct: 226 LINACGSSGNWKEALNVCKKM-------TDNGVGPDLVTHNIMLTAFKSGTQYSKALSYF 278
Query: 169 SEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME-RCKPNIVTYNILL 227
++ + RPD + +N +I H K K KA+ F MK + C P++VT+ ++
Sbjct: 279 ELIKGTHIRPDTTTHNIII----HCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMI 334
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
+ +++ A F + L P+I +YN ++ AY GM E V + +K N +
Sbjct: 335 HLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFR 394
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
PD++++ L+++YG+ + K ++FK + + KP + ++N++I YG L A +
Sbjct: 395 PDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEI 454
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
++M K P+ ++ ++ G C + + G + N+ + +Y
Sbjct: 455 LREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYIN 514
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
G +A L+ + + DS TY +L K
Sbjct: 515 VGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCK 549
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 150/359 (41%), Gaps = 46/359 (12%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRN--SGCRPDPSVYNALITAHLHTRDKAKALA 201
DT ++ +I + K Q A+ +F+ M+ S C PD + ++I HL++ +
Sbjct: 289 DTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMI--HLYS--VCGHIE 344
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
F M E KPNIV+YN LL A A ++ +F E+ ++ PD+ +Y +
Sbjct: 345 NCEAAFNMMLA-EGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSL 403
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
++AYG++ ++ + +K N KP+I+++N LID+YG + ++ + + K
Sbjct: 404 LNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKI 463
Query: 322 KPTLPT-----------------------------------FNSMIINYGKARLQGKAEY 346
P + + +NS I +Y KA
Sbjct: 464 HPNVVSICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAID 523
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
++ M K +TY +I+ A +E+ L M ++++ AY
Sbjct: 524 LYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSIICAYS 583
Query: 407 MN----GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
G EA+ F ++G +PD TY + AY A E + L + ME+N +
Sbjct: 584 KQASALGQIIEAESTFNLMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDV 642
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 124/293 (42%), Gaps = 37/293 (12%)
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK--------------- 267
YN+++R A+ DQ LF E+ + PD TYN +++A+G+
Sbjct: 153 YNMMIRLHARHNRTDQARGLFFEMQKCRCKPDAETYNALINAHGRAGQWRWAMNIMDDML 212
Query: 268 --------------------NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
+G KE +V +M N PD++T N+++ ++ +
Sbjct: 213 RAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYS 272
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT--PSFITYEC 365
K F+ + + +P T N +I K + KA +F M K P +T+
Sbjct: 273 KALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTS 332
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+I +Y C ++ F+ + G + + NA+L AY G+ EA +F G
Sbjct: 333 MIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNG 392
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
PD +Y L AY ++ + +++ K +++N + PN + ++ + S+
Sbjct: 393 FRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSN 445
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 109/241 (45%), Gaps = 10/241 (4%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + G + +E+ R M++ + + I + L+A G+ GQ + S
Sbjct: 438 LIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICT-LLAACGRCGQKVKIDTVLSAAEMR 496
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G + + YN+ I ++++ + KA+ + M+ ++ K + VTY +L+ C +
Sbjct: 497 GIKLNTVAYNSAIGSYINVGE----YDKAIDLYNSMRK-KKIKSDSVTYTVLISGCCKMS 551
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKN----GMIKEMESVLSRMKSNQCKPDI 290
+ + +E+ L Y+ ++ AY K G I E ES + MKS C PD+
Sbjct: 552 KFGEALSFMEEMMHLKLPMSKEVYSSIICAYSKQASALGQIIEAESTFNLMKSLGCSPDV 611
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
+T+ ++D+Y + ++K+ +F+ + + K +++ + K G+ + Q
Sbjct: 612 VTYTAMLDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFNKGGQPGRVLSLAQS 671
Query: 351 M 351
M
Sbjct: 672 M 672
>gi|302809589|ref|XP_002986487.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
gi|300145670|gb|EFJ12344.1| hypothetical protein SELMODRAFT_182414 [Selaginella moellendorffii]
Length = 773
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 187/400 (46%), Gaps = 15/400 (3%)
Query: 69 KRGRKSEELESKELVRVLMRSFSDKEP---LVRTLNKYVKVVRSEHCFLLFEELGKSDKW 125
++G+ E+ES + S S P + R ++ Y + + L+F E W
Sbjct: 9 EKGKYGYEIES------CINSLSQLPPRGSVTRCMDLYRSKLTMQDFSLIFREFAARSDW 62
Query: 126 LQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
+ L +F++MQ+Q+W IY+ +I +MG++G +F +M + + + + A
Sbjct: 63 HRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDMPENDVKWNVYAFTA 122
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR-NVDQVNALFK 244
LI A+ + +L +MK ER +PN++TYN +L AC++ + + + LF
Sbjct: 123 LINAY----GRNGQYEASLHLLARMK-KERVEPNLITYNTVLNACSKGGLDWEGLLNLFA 177
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
++ + PD+ TYN ++ A G++++ V M + D +T+ L+D++
Sbjct: 178 QMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSN 237
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
++E++ + + P + +NS+I Y A A VF++M P TY
Sbjct: 238 QLGRVEELLREMEDEGNSPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYS 297
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
++ +YG + R +F ++ +L V+T N++++ + G E+ LF + +
Sbjct: 298 TLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDS 357
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
GV PD +TY L + + K+ + M N P+
Sbjct: 358 GVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPS 397
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 148/334 (44%), Gaps = 6/334 (1%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
W L +F M + D Y+ L++ +G A +F M SG D Y
Sbjct: 169 WEGLLNLFAQM-RHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYK 227
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
+L+ T + L + ++M+ E P+I YN L+ A A A NV +FK
Sbjct: 228 SLV----DTFAGSNQLGRVEELLREMED-EGNSPDIAGYNSLIEAYADAGNVHGAAGVFK 282
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
++ APD+ TY+ ++ YG G +++ S+ S MK P + T+N LI +G+
Sbjct: 283 QMQRGGCAPDVETYSTLLRIYGNQGCFEQVRSLFSDMKELSTPPTVATYNSLIQVFGEGG 342
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
F + +F ++ S KP T+++++ G+ L +A + Q M + TPS
Sbjct: 343 YFQESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPSLEASA 402
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
+I+ YG A + + + G D +VS +A+++ Y GL EA +
Sbjct: 403 GLISSYGKMAMYKDALVSYYRIREAGLDPQVSAYDALIQGYAKGGLYVEAGSTLYAMNKA 462
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
G S+ + +AY+K + + + ++Q
Sbjct: 463 GFQAPVSSVNSVMEAYSKVGLHDEALEFFSELQQ 496
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 116/267 (43%), Gaps = 9/267 (3%)
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELH-ESILAPDIYTYNGVMDAYGKNGMIKE 273
R K + ++++ R A + + LFK + + P + Y ++ G+ G++++
Sbjct: 41 RSKLTMQDFSLIFREFAARSDWHRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEK 100
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
+ M N K ++ F LI++YG+ ++ + + + +P L T+N+++
Sbjct: 101 CSEIFEDMPENDVKWNVYAFTALINAYGRNGQYEASLHLLARMKKERVEPNLITYNTVLN 160
Query: 334 NYGKARLQGKAEY-VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKD 392
K L + +F +M P ITY +++ V +A +F +++ G
Sbjct: 161 ACSKGGLDWEGLLNLFAQMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVV 220
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
T ++++ + + + L + G +PD + Y L +AY A +
Sbjct: 221 ADAVTYKSLVDTFAGSNQLGRVEELLREMEDEGNSPDIAGYNSLIEAYADAGNVHGAAGV 280
Query: 453 LKRMEQNGIVPNKRFFLEALETFSSSL 479
K+M++ G P+ +ET+S+ L
Sbjct: 281 FKQMQRGGCAPD-------VETYSTLL 300
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 104/262 (39%), Gaps = 42/262 (16%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA---------------HLH 192
Y+ LI V G+ G + ++ LF +M +SG +PD + Y+AL++ H+
Sbjct: 331 YNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHML 390
Query: 193 TRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILA 252
T + +L + G M K +V+Y + E+ L
Sbjct: 391 TNESTPSLEASAGLISSYGKMAMYKDALVSY--------------------YRIREAGLD 430
Query: 253 PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
P + Y+ ++ Y K G+ E S L M + + + N ++++Y K D+ +
Sbjct: 431 PQVSAYDALIQGYAKGGLYVEAGSTLYAMNKAGFQAPVSSVNSVMEAYSKVGLHDEALEF 490
Query: 313 FKSLMHSK----EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
F L + ++ T T + + G + K E+V K T+ P Y +++
Sbjct: 491 FSELQQKEGSEVDERTHETLLGVYCDMGLLE-EAKEEFVIIKETSK--VPGARVYCLLLS 547
Query: 369 MYGYCDNVSRAREIFDELSKLG 390
+ A ++ DE+ G
Sbjct: 548 LCVRRSKWDYATQLLDEMIAAG 569
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 170/336 (50%), Gaps = 3/336 (0%)
Query: 133 RWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH 192
RW + ++ +++ ++ V + G+ A L MR+ PD +N LI A
Sbjct: 49 RWPHLRFPHLPTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAK 108
Query: 193 TRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILA 252
+ A +A L + + G+ +P+ +TYN L+ AC+Q N+D A+F+E+ S
Sbjct: 109 SGCLAAGVALELLHEVRQAGL---RPDAITYNTLISACSQGSNLDDAVAVFEEMIASECR 165
Query: 253 PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
PD++TYN ++ +G+ G +E E + + +PD +T+N L+ ++ K +++E+V
Sbjct: 166 PDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERV 225
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGY 372
+ L+ + + T+N+MI YGK A ++ +M A+ TP +TY ++ G
Sbjct: 226 CEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGK 285
Query: 373 CDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
D +S A ++ +E++ G + T +A++ AY +G +A+ F+ GV PD
Sbjct: 286 MDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLA 345
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
Y ++ + +++ + L + M ++G P+ +
Sbjct: 346 YLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLY 381
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 147/340 (43%), Gaps = 11/340 (3%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG--QTRLAMWLFSEMRNSGCR 177
G+ D Q L+ R + D ++ LI K G +A+ L E+R +G R
Sbjct: 75 GRFDDARQLLDAMRDQDIE----PDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLR 130
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
PD YN LI+A + L A+ F++M E C+P++ TYN ++ +
Sbjct: 131 PDAITYNTLISAC----SQGSNLDDAVAVFEEMIASE-CRPDLWTYNAMVSVHGRCGKAQ 185
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ +FKEL E PD TYN ++ A+ K G ++ +E V + + D IT+N +I
Sbjct: 186 EAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMI 245
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
YGK D ++ + P T+ ++ + GK +A V ++M
Sbjct: 246 HMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLK 305
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P+ +T+ +I Y A FD + + G ML+ + + + +L
Sbjct: 306 PTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVL 365
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
+ G PD Y++L A K N + ++ +++ ME
Sbjct: 366 YRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDME 405
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 151/305 (49%), Gaps = 11/305 (3%)
Query: 178 PDPSVYNALITAHLHTR--DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
P V+NA++ + + D A+ L A M+ + +P++V++N L+ A A++
Sbjct: 59 PTVQVFNAMMGVYARSGRFDDARQLLDA------MRDQD-IEPDLVSFNTLINARAKSGC 111
Query: 236 VDQVNAL--FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ AL E+ ++ L PD TYN ++ A + + + +V M +++C+PD+ T+
Sbjct: 112 LAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTY 171
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N ++ +G+ + E +FK L+ +P T+NS++ + K + E V +++
Sbjct: 172 NAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVK 231
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
+ ITY +I MYG + A ++DE+ +G T ++++ +E
Sbjct: 232 AGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISE 291
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
A + E + G+ P T+ L AY K+ ++ ++ RM ++G+ P++ +L L+
Sbjct: 292 AGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLD 351
Query: 474 TFSSS 478
F+ S
Sbjct: 352 VFARS 356
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 124/297 (41%), Gaps = 47/297 (15%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH------------- 190
D Y+ +++V G+ G+ + A +F E+ G +PD YN+L+ A
Sbjct: 167 DLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVC 226
Query: 191 ------------------LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
+H K L ALG + +M+ + C P+ VTY +L+ + +
Sbjct: 227 EELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAI-GCTPDAVTYTVLVDSLGK 285
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+ + + +E+ ++ L P + T++ ++ AY K+G + E RM + KPD +
Sbjct: 286 MDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLA 345
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+ +++D + + K+ ++++++ KP + ++ K + E V Q M
Sbjct: 346 YLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDME 405
Query: 353 A------MKYTPSFITYECI---------ITMYGYCDNVSRAREIFDELSKLGKDMK 394
A + + I ECI + GY + I D K+GK K
Sbjct: 406 AVFEMNPLVISSILIKAECISQGASLLKRACLQGYEPDGKSLLSILDAYEKMGKHEK 462
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/390 (20%), Positives = 169/390 (43%), Gaps = 44/390 (11%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ E GK W Q + ++++ D I++ LI + G A +F M
Sbjct: 594 MIEAYGKLKLWQQAENFVKGLKQESG--VDRRIWNALIHAYAESGLYEHARAIFDIMIKK 651
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P N ++ A L + L + Q + K + T ++L A A+A
Sbjct: 652 GPLPTVESVNGMMRA-LIVDGRLDELYVVVQELQDLD----IKISKSTVLLMLEAFAKAG 706
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+V +V ++ + + P+++ Y ++ N +++E +++ M+ KPD++ N
Sbjct: 707 DVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLN 766
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY------------------- 335
L+ Y FD+ +V+ S++ + +P T+N++I+ Y
Sbjct: 767 TLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKR 826
Query: 336 ----------------GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
GKA+L +A+ +F++M Y + Y ++ +Y N S+A
Sbjct: 827 GLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKA 886
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+ + + G + ++T++ ++ +Y +G P EA+ + + + + + Y + A
Sbjct: 887 EHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDA 946
Query: 440 YTKANMKEL-VQKLLKRMEQNGIVPNKRFF 468
Y + L + KLL+ M+++G+ P+ + +
Sbjct: 947 YLRNRDYSLGITKLLE-MKRDGVEPDHQVW 975
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 140/320 (43%), Gaps = 25/320 (7%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT---RDKAKALAKALGYF 207
++ K G M +++ M+ +G P+ +Y +I+ H RD +A+ G
Sbjct: 698 MLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEG-- 755
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
KP++V N LL N D+ ++ + E+ L PD TYN ++ Y +
Sbjct: 756 ------AGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSR 809
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
N +E ++L M P + ++ +L+ + GK + +++ + +F+ + +
Sbjct: 810 NFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSI 869
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
++ M+ Y AR KAE++ M P+ T ++T YG + A ++ + L
Sbjct: 870 YHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLK 929
Query: 388 KLGKDMKVSTL--NAMLEAYCMN-----GLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
++++STL + +L+AY N G+ L E + GV PD + +A
Sbjct: 930 S--SNLEISTLPYSTVLDAYLRNRDYSLGITK----LLEMKRD-GVEPDHQVWTSFIRAA 982
Query: 441 TKANMKELVQKLLKRMEQNG 460
+ + LLK ++ G
Sbjct: 983 SLCEQTDDAILLLKSLQDCG 1002
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 137/374 (36%), Gaps = 57/374 (15%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y ++ V + +TR M L+ M G +PD +Y L+ A K + G
Sbjct: 346 YLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAA----LAKGNEHDEIEGVI 401
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
Q M+ + P +++ +IL++A + Q +L K PD + ++DAY K
Sbjct: 402 QDMEAVFEMNPLVIS-SILIKA----ECISQGASLLKRACLQGYEPDGKSLLSILDAYEK 456
Query: 268 -----------------------------------NGMIKEMESVLSR---MKSNQCKPD 289
NG I + SR +K D
Sbjct: 457 MGKHEKGLSLLEWIRQHVPNSHNLISECSIMLLCKNGKIVDAIQEYSRKQMLKRGSFGQD 516
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
+ LI + + F + QVF + P+ + S+I Y RL G E +Q
Sbjct: 517 CDLYEYLITYLEEAELFPEACQVFCDMQFLGIVPSQKIYQSII--YTCCRL-GFPETAYQ 573
Query: 350 KMT-AMKYTPSFITYECIITM---YGYCDNVSRAREIFDELSKL-GKDMKVSTLNAMLEA 404
M A + S C + M YG +A L + G D ++ NA++ A
Sbjct: 574 LMDDAARSDISLNILSCRVAMIEAYGKLKLWQQAENFVKGLKQESGVDRRI--WNALIHA 631
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y +GL A +F+ G P + + +A + + +++ ++ I +
Sbjct: 632 YAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKIS 691
Query: 465 KRFFLEALETFSSS 478
K L LE F+ +
Sbjct: 692 KSTVLLMLEAFAKA 705
>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
Length = 933
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 171/371 (46%), Gaps = 42/371 (11%)
Query: 132 FRWMQK--QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
F++ Q+ R + D +Y+ I + G+ + A + +EMRN G +PD S YN +I +
Sbjct: 539 FKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVS 598
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL----------------------- 226
H + AKAL +MK M KPN++TYN L
Sbjct: 599 HCRKGETAKALK----LLHEMK-MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSA 653
Query: 227 ------------LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
L+AC+Q+R +D + + + + + L DI YN ++ +GM ++
Sbjct: 654 GFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKA 713
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
VL M + PD ITFN LI + K D + ++H P + TFN+++
Sbjct: 714 TVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGG 773
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
G+A V +M P+ +TY+ ++T +G N A ++ E+ G K
Sbjct: 774 LESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPK 833
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
VST NA++ + G+ T+A LF++ GV P S TY +L +++ V+K LK
Sbjct: 834 VSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLK 893
Query: 455 RMEQNGIVPNK 465
M++ G P+K
Sbjct: 894 DMKEKGFSPSK 904
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 163/365 (44%), Gaps = 18/365 (4%)
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
++ M K+R + Y LI K A+ ++ +M G + + ++L+
Sbjct: 436 YKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNG-- 493
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
R K + +A+ F+ G + V Y L+ +A ++ +EL + +
Sbjct: 494 -LRQNGK-IEEAMALFKDASG-SGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNM 550
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
PD YN ++ G KE +S+L+ M++ KPD T+N +I S+ ++ K +
Sbjct: 551 LPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610
Query: 312 VFKSLMHSKEKPTLPTFNSMIIN-YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+ + S KP L T+N+++ +G ++ KA+Y+ +M + ++PS +T+ ++
Sbjct: 611 LLHEMKMSSIKPNLITYNTLVAGLFGTGAVE-KAKYLLNEMVSAGFSPSSLTHRRVLQAC 669
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
+ +I + + G ++ N +L+ C +G+ +A ++ E G+ PD+
Sbjct: 670 SQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDT 729
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQS----GS 486
T+ L + K++ + +M I PN + TF++ L G +S G
Sbjct: 730 ITFNALILGHCKSSHLDNAFATYAQMLHQNISPN-------IATFNTLLGGLESVGRIGE 782
Query: 487 AKTDL 491
A T L
Sbjct: 783 AGTVL 787
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 144/352 (40%), Gaps = 32/352 (9%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL------- 200
Y+ L+A + GQ A + M+ +G P+ + Y I + T+ +A
Sbjct: 207 YNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMV 266
Query: 201 ------------------------AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
++A F++M + PN VTY L+ + A+A
Sbjct: 267 RNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAV-PNHVTYCTLIDSLAKAGRG 325
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
++ +L E+ + D+ TY +MD GK G E++ L S+ + +T+ +L
Sbjct: 326 KELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVL 385
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
ID+ K D+ EQV + P + TF+S+I + K L KA + M
Sbjct: 386 IDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGI 445
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
P+ +TY +I + A E++ ++ G ++ +++++ NG EA
Sbjct: 446 NPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMA 505
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
LF+++ G++ D Y L KA K + + ++P+ +
Sbjct: 506 LFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVY 557
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 124/253 (49%), Gaps = 11/253 (4%)
Query: 171 MRNSGCRPDPSVYNALITA---HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
M N+G D +VYN L+ H TR L + LG P+ +T+N L+
Sbjct: 685 MMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLG--------SGIAPDTITFNALI 736
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
++ ++D A + ++ ++P+I T+N ++ G I E +VL M+ + +
Sbjct: 737 LGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLE 796
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P+ +T+++L+ +GK+ + +++ ++ P + T+N++I ++ KA + +A+ +
Sbjct: 797 PNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKEL 856
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F+ M P+ TY+ +++ + N + ++ ++ + G TL+ + A+
Sbjct: 857 FKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSK 916
Query: 408 NGLPTEADLLFEN 420
G+ +A L +N
Sbjct: 917 PGMTWQAQRLLKN 929
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 117/287 (40%), Gaps = 15/287 (5%)
Query: 177 RP-DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
RP DP+ NAL+ +H R A+A + +P V YNILL A + +
Sbjct: 69 RPADPASLNALLYSHCRLRLLRPAIAL----------LRSSRPTTVAYNILLAALSDHAH 118
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
A+ E+ + + D T N ++ +NG + ++ R D+I +N
Sbjct: 119 AP---AVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHAL-DVIGWNT 174
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
LI Y + V + + +N+++ + +A A V M
Sbjct: 175 LIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAG 234
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
P+ TY I Y V A ++++ + + G + V TL+A++ C +G +EA
Sbjct: 235 VDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAY 294
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
LF +G P+ TY L + KA + + LL M G+V
Sbjct: 295 ALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVV 341
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 133/318 (41%), Gaps = 9/318 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + K G A E+ + PD VYN I L K K +A
Sbjct: 522 YTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINC-LCILGKFK---EAKSIL 577
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M+ M KP+ TYN ++ + + + L E+ S + P++ TYN ++
Sbjct: 578 TEMRNMG-LKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFG 636
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G +++ + +L+ M S P +T ++ + + + D + + + +M++ +
Sbjct: 637 TGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITV 696
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDE 385
+N+++ + KA V ++M P IT+ +I G+C ++ A + +
Sbjct: 697 YNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALI--LGHCKSSHLDNAFATYAQ 754
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ ++T N +L G EA + G+ P++ TY +L + K +
Sbjct: 755 MLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSN 814
Query: 446 KELVQKLLKRMEQNGIVP 463
K +L M G VP
Sbjct: 815 KVEAMRLYCEMVGKGFVP 832
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 139/341 (40%), Gaps = 30/341 (8%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALG 205
Y+ L+A + A + +EM G D N L+ D A ALA G
Sbjct: 106 YNILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGG 162
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+ +++ +N L+ + + ++ + L D+ YN ++ +
Sbjct: 163 GIHAL--------DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGF 214
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ G + VL MK P++ T+ I Y + + ++ +++ ++ + +
Sbjct: 215 CRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDV 274
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T ++++ + +A +F++M + P+ +TY T+ R +E+
Sbjct: 275 VTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTY---CTLIDSLAKAGRGKELLSL 331
Query: 386 LSKL---GKDMKVSTLNAMLEAYCMNGLPTEAD--LLFENSHNMGVTPDSSTYKLLYKAY 440
L ++ G M + T A+++ G E L F S N+ + + TY +L A
Sbjct: 332 LGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSL--NGVTYTVLIDAL 389
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
KA+ + +++L ME+ I PN + TFSS + G
Sbjct: 390 CKAHNVDEAEQVLLEMEEKSISPN-------VVTFSSVING 423
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 185/399 (46%), Gaps = 13/399 (3%)
Query: 74 SEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEH--------CFLLFEELGKSDKW 125
S +L E L+R ++ R L Y +V+ H ++ LG+ K
Sbjct: 157 SHQLVGLEDFPYLLRELGNRGEWERALQGYEWMVQQVHLRSEWSKLASIMISTLGRLGKV 216
Query: 126 LQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
L+VF QK + + YS +++ G+ G+ R A+ +F M+ +GC+P+ YN
Sbjct: 217 EIALDVFNRAQKAG-FGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNT 275
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
+I A L +AL F +M+ E +P+ +T+N L+ C++ + +F E
Sbjct: 276 IIDA---CGKGGVDLKQALDIFDEMQ-KEGVEPDRITFNSLIAVCSRGGLWEDSQRVFAE 331
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ + DI+T+N ++DA K G ++ S+++ M+ P+++T++ +ID YGK
Sbjct: 332 MQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGC 391
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
F++ ++ + S +P ++N++I Y K A + M + +TY
Sbjct: 392 FEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERVGLKADVVTYNA 451
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+I YG A +FD++ G V T +A++++Y G+ + +F G
Sbjct: 452 LIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAG 511
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ PD Y L + K + E LL+ M Q GI PN
Sbjct: 512 LKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPN 550
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 116/288 (40%), Gaps = 62/288 (21%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
AD Y+ LI GK+G+ + A LF +M+ G P+ Y+ALI ++ KA
Sbjct: 444 ADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSY----SKAGMHQD 499
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
F + K KP++V Y+ L+ +C + V+ L +E+ ++ + P+I TYN ++
Sbjct: 500 VSNVFTEFK-RAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLI 558
Query: 263 DAYGKNGMIKEME-----------------------------------------SVLSRM 281
DAYG+ G ++E SV M
Sbjct: 559 DAYGRYGQADKLEAVKANMPNSVQKIGERSMEVVRKPPPSQQNASDHTGVLAAVSVFHEM 618
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
+ KP+++TF+ ++++ + + + + + + F+ + L
Sbjct: 619 QQFGLKPNVVTFSAILNACSRCASLQEASVLLEQMRF---------FDGWVYGIAHGLLM 669
Query: 342 G-------KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
G +A+ +F +++ M Y Y + + + A+E+
Sbjct: 670 GLREQVWVEAQRLFDEISRMDYATGAAFYNALTDVLWHFGQRQGAQEV 717
>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
Length = 933
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 169/371 (45%), Gaps = 42/371 (11%)
Query: 132 FRWMQK--QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
F++ Q+ R + D +Y+ I + G+ + A +EMRN G +PD S YN +I +
Sbjct: 539 FKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVS 598
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL----------------------- 226
H + AKAL +MK M KPN++TYN L
Sbjct: 599 HCRKGETAKALK----LLHEMK-MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSA 653
Query: 227 ------------LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
L+AC+Q+R +D + + + + + L DI YN ++ +GM ++
Sbjct: 654 GFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKA 713
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
VL M + PD ITFN LI + K D + ++H P + TFN+++
Sbjct: 714 TVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGG 773
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
G+A V +M P+ +TY+ + T +G N A ++ E+ G K
Sbjct: 774 LESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPK 833
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
VST NA++ + G+ T+A LF++ GV P S TY +L +++ V+K LK
Sbjct: 834 VSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLK 893
Query: 455 RMEQNGIVPNK 465
M++ G P+K
Sbjct: 894 DMKEKGFSPSK 904
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 163/365 (44%), Gaps = 18/365 (4%)
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
++ M K+R + Y LI K A+ ++ +M G + + + ++L+
Sbjct: 436 YKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNG-- 493
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
R K + +A+ F+ G + V Y L+ +A ++ +EL + +
Sbjct: 494 -LRQNGK-IEEAMALFKDASG-SGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNM 550
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
PD YN ++ G KE +S L+ M++ KPD T+N +I S+ ++ K +
Sbjct: 551 LPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610
Query: 312 VFKSLMHSKEKPTLPTFNSMIIN-YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+ + S KP L T+N+++ +G ++ KA+Y+ +M + ++PS +T+ ++
Sbjct: 611 LLHEMKMSSIKPNLITYNTLVAGLFGTGAVE-KAKYLLNEMVSAGFSPSSLTHRRVLQAC 669
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
+ +I + + G ++ N +L+ C +G+ +A ++ E G+ PD+
Sbjct: 670 SQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDT 729
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQS----GS 486
T+ L + K++ + +M I PN + TF++ L G +S G
Sbjct: 730 ITFNALILGHCKSSHLDNAFATYAQMLHQNISPN-------IATFNTLLGGLESVGRIGE 782
Query: 487 AKTDL 491
A T L
Sbjct: 783 AGTVL 787
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 144/352 (40%), Gaps = 32/352 (9%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL------- 200
Y+ L+A + GQ A + M+ +G P+ + Y I + T+ +A
Sbjct: 207 YNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMV 266
Query: 201 ------------------------AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
++A F++M + PN VTY L+ + A+A
Sbjct: 267 RNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVG-AAPNHVTYCTLIDSLAKAGRG 325
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
++ +L E+ + D+ TY +MD GK G E++ L S+ P+ +T+ +L
Sbjct: 326 KELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVL 385
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
ID+ K D+ EQV + P + TF+S+I + K L KA + M
Sbjct: 386 IDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGI 445
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
P+ +TY +I + A E++ ++ G + +++++ NG EA
Sbjct: 446 NPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMA 505
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
LF+++ G++ D Y L KA K + + ++P+ +
Sbjct: 506 LFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVY 557
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 123/253 (48%), Gaps = 11/253 (4%)
Query: 171 MRNSGCRPDPSVYNALITA---HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
M N+G D +VYN L+ H TR L + LG P+ +T+N L+
Sbjct: 685 MMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLG--------SGIAPDTITFNALI 736
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
++ ++D A + ++ ++P+I T+N ++ G I E +VL M+ + +
Sbjct: 737 LGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLE 796
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P+ +T+++L +GK+ + +++ ++ P + T+N++I ++ KA + +A+ +
Sbjct: 797 PNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKEL 856
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F+ M P+ TY+ +++ + N + ++ ++ + G TL+ + A+
Sbjct: 857 FKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSK 916
Query: 408 NGLPTEADLLFEN 420
G+ +A L +N
Sbjct: 917 PGMTWQAQRLLKN 929
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 105/236 (44%), Gaps = 17/236 (7%)
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
L D+ YN ++ + + G + VL MK P++ T+ I Y + + ++
Sbjct: 200 LPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAF 259
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+++ ++ + + T ++++ + +A +F++M + P+ +TY T+
Sbjct: 260 DLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTY---CTLI 316
Query: 371 GYCDNVSRAREIFDELSKL---GKDMKVSTLNAMLEAYCMNGLPTEAD--LLFENSHNMG 425
R +E+ L ++ G M + T A+++ G E L F S N+
Sbjct: 317 DSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNL- 375
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
+P+ TY +L A KA+ + +++L ME+ I PN + TFSS + G
Sbjct: 376 -SPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPN-------VVTFSSVING 423
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 113/321 (35%), Gaps = 83/321 (25%)
Query: 177 RP-DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
RP DP+ NAL+ +H R A+A + +P V YNILL A + +
Sbjct: 69 RPADPASLNALLYSHCRLRLLRPAIAL----------LRSSRPTTVAYNILLAALSDHAH 118
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME-------------------- 275
A+ E+ + + D T N ++ +NG +
Sbjct: 119 AP---AVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRAGGITPWMSSAGTLS 175
Query: 276 --------------SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
SV RM + D++ +N L+ + + D V + +
Sbjct: 176 LLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGV 235
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P + T YTP FI Y C V A +
Sbjct: 236 DPNVAT----------------------------YTP-FIVYYC------RTKGVEEAFD 260
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+++ + + G + V TL+A++ C +G +EA LF +G P+ TY L +
Sbjct: 261 LYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLA 320
Query: 442 KANMKELVQKLLKRMEQNGIV 462
KA + + LL M G+V
Sbjct: 321 KAGRGKELLSLLGEMVSRGVV 341
>gi|302762967|ref|XP_002964905.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
gi|300167138|gb|EFJ33743.1| hypothetical protein SELMODRAFT_167316 [Selaginella moellendorffii]
Length = 773
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 186/400 (46%), Gaps = 15/400 (3%)
Query: 69 KRGRKSEELESKELVRVLMRSFSDKEP---LVRTLNKYVKVVRSEHCFLLFEELGKSDKW 125
++G+ E+ES + S S P + R ++ Y + + L+F E W
Sbjct: 9 EKGKYGYEIES------CINSLSQLPPRGSVTRCMDLYRSKLTMQDFSLIFREFAARSDW 62
Query: 126 LQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
+ L +F++MQ+Q+W IY+ +I +MG++G +F +M + + + + A
Sbjct: 63 HRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEKCSEIFEDMPENDVKWNVYAFTA 122
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR-NVDQVNALFK 244
LI A+ + +L +MK E+ +PN++TYN +L AC++ + + + LF
Sbjct: 123 LINAY----GRNGQYEASLHLLARMK-KEQVEPNLITYNTVLNACSKGGLDWEGLLNLFA 177
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
++ + PD+ TYN ++ A G++++ V M + D +T+ L+D++
Sbjct: 178 QMRHEGIQPDLITYNTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSN 237
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
++E++ + + P + +NS+I Y A A VF++M P TY
Sbjct: 238 QLGRVEELLREMEDEGNPPDIAGYNSLIEAYADAGNVHGAAGVFKQMQRGGCAPDVETYS 297
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
++ +YG + R +F ++ L V+T N++++ + G E+ LF + +
Sbjct: 298 TLLRIYGNQGCFEQVRSLFSDMKDLSTPPTVATYNSLIQVFGEGGYFQESINLFHDMVDS 357
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
GV PD +TY L + + K+ + M N P+
Sbjct: 358 GVKPDDATYSALLSVCGRGGLTREAAKIHQHMLTNESTPS 397
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 113/275 (41%), Gaps = 39/275 (14%)
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELH-ESILAPDIYTYNGVMDAYGKNGMIKE 273
R K + ++++ R A + + LFK + + P + Y ++ G+ G++++
Sbjct: 41 RSKLTMQDFSLIFREFAARSDWHRALRLFKYMQRQQWCKPTEHIYTIMIGIMGREGLLEK 100
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
+ M N K ++ F LI++YG+ ++ + + + +P L T+N+++
Sbjct: 101 CSEIFEDMPENDVKWNVYAFTALINAYGRNGQYEASLHLLARMKKEQVEPNLITYNTVLN 160
Query: 334 NYGKARLQGKAEY-VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKD 392
K L + +F +M P ITY
Sbjct: 161 ACSKGGLDWEGLLNLFAQMRHEGIQPDLITY----------------------------- 191
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
N +L A GL +A ++F+ + GV D+ TYK L + +N V++L
Sbjct: 192 ------NTLLSACSSRGLVEQAAMVFKTMNESGVVADAVTYKSLVDTFAGSNQLGRVEEL 245
Query: 453 LKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSA 487
L+ ME G P+ + +E ++ AG+ G+A
Sbjct: 246 LREMEDEGNPPDIAGYNSLIEAYAD--AGNVHGAA 278
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 35/184 (19%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA---------------HLH 192
Y+ LI V G+ G + ++ LF +M +SG +PD + Y+AL++ H+
Sbjct: 331 YNSLIQVFGEGGYFQESINLFHDMVDSGVKPDDATYSALLSVCGRGGLTREAAKIHQHML 390
Query: 193 TRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILA 252
T + +L + G M K +V+Y + E+ L
Sbjct: 391 TNESTPSLEASAGLISSYGKMAMYKDALVSY--------------------YRIREAGLD 430
Query: 253 PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
P + Y+ ++ Y K G+ E S L M + + + N ++++Y K D+ +
Sbjct: 431 PQVSAYDALIQGYAKGGLYVEAGSTLYAMNKAGFQAPVSSVNSVMEAYSKVGLHDEALEF 490
Query: 313 FKSL 316
F L
Sbjct: 491 FSEL 494
>gi|242050640|ref|XP_002463064.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
gi|241926441|gb|EER99585.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
Length = 558
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 172/390 (44%), Gaps = 11/390 (2%)
Query: 79 SKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQ 138
S+ RVL +D + LN + + LL E+ S + VFRWM+ Q
Sbjct: 87 SEVAARVLALPPADAHAVDAVLNCWAGRFARRNFPLLIREITISGSLKHAVHVFRWMKIQ 146
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
Y A IY +I + + Q A LF EM+ C+PD YN+LI AH
Sbjct: 147 ENYCARNDIYGMMIRLHARHNQVDQARGLFFEMQEWRCKPDTDTYNSLIHAHARAGQWRW 206
Query: 199 ALAKALGYFQKMKGMERCK--PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
A+ M M+R P+ TYN ++ AC A N + L K++ E+ + PD+
Sbjct: 207 AI-------NIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLI 259
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
T+N V+ A+ + + MKS++ PD T N++I K + + ++F S+
Sbjct: 260 THNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKVALYGEAIELFNSM 319
Query: 317 MHSKE--KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
+ P + T+ S++ +Y + VF M A P+ ++Y ++ Y
Sbjct: 320 RERRTICPPDVVTYTSIMYSYSVCGQAENCKAVFDMMVAEGVRPNIVSYNALLGAYASHG 379
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
+ A E F L + G + + ++L AY + LP +A +F P+ +Y
Sbjct: 380 MHTEALETFKLLKQNGFKPDIVSYTSLLNAYGRSALPEKAREVFNEMRKNACKPNKVSYN 439
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L AY A M + LL MEQ+GI P+
Sbjct: 440 ALIDAYGSAGMLKEAISLLHEMEQDGIQPD 469
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 119/270 (44%), Gaps = 11/270 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRN--SGCRPDPSVYNALITAH--LHTRDKAKA 199
DT + +I + K A+ LF+ MR + C PD Y +++ ++ + KA
Sbjct: 292 DTCTMNIVIHCLVKVALYGEAIELFNSMRERRTICPPDVVTYTSIMYSYSVCGQAENCKA 351
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
+ F M E +PNIV+YN LL A A + FK L ++ PDI +Y
Sbjct: 352 V------FDMMVA-EGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGFKPDIVSYT 404
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
+++AYG++ + ++ V + M+ N CKP+ +++N LID+YG + + +
Sbjct: 405 SLLNAYGRSALPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQD 464
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
+P + + ++++ G+ R K + + + + Y I Y + +A
Sbjct: 465 GIQPDVISISTLLTACGRCRQPTKIGIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKA 524
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
E++ + T N ++ C G
Sbjct: 525 LELYTSMRTGNVKPDAVTYNILISGSCKLG 554
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 89/182 (48%), Gaps = 6/182 (3%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ LE F+ + KQ + D Y+ L+ G+ A +F+EMR + C+P+ YNAL
Sbjct: 383 EALETFK-LLKQNGFKPDIVSYTSLLNAYGRSALPEKAREVFNEMRKNACKPNKVSYNAL 441
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I A+ A L +A+ +M+ + +P++++ + LL AC + R ++ +
Sbjct: 442 IDAY----GSAGMLKEAISLLHEME-QDGIQPDVISISTLLTACGRCRQPTKIGIILAAA 496
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
+ + YN + +Y G K+ + + M++ KPD +T+N+LI K +F
Sbjct: 497 KSRGIQLNTVAYNSGIGSYLSLGDYKKALELYTSMRTGNVKPDAVTYNILISGSCKLGSF 556
Query: 307 DK 308
K
Sbjct: 557 RK 558
>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 933
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 169/371 (45%), Gaps = 42/371 (11%)
Query: 132 FRWMQK--QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
F++ Q+ R + D +Y+ I + G+ + A +EMRN G +PD S YN +I +
Sbjct: 539 FKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVS 598
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL----------------------- 226
H + AKAL +MK M KPN++TYN L
Sbjct: 599 HCRKGETAKALK----LLHEMK-MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSA 653
Query: 227 ------------LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
L+AC+Q+R +D + + + + + L DI YN ++ +GM ++
Sbjct: 654 GFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKA 713
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
VL M + PD ITFN LI + K D + ++H P + TFN+++
Sbjct: 714 TVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGG 773
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
G+A V +M P+ +TY+ + T +G N A ++ E+ G K
Sbjct: 774 LESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPK 833
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
VST NA++ + G+ T+A LF++ GV P S TY +L +++ V+K LK
Sbjct: 834 VSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLK 893
Query: 455 RMEQNGIVPNK 465
M++ G P+K
Sbjct: 894 DMKEKGFSPSK 904
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 159/354 (44%), Gaps = 14/354 (3%)
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
++ M K+R + Y LI K A+ ++ +M G + + + ++L+
Sbjct: 436 YKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNG-- 493
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
R K + +A+ F+ G + V Y L+ +A ++ +EL + +
Sbjct: 494 -LRQNGK-IEEAMALFKDASG-SGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNM 550
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
PD YN ++ G KE +S L+ M++ KPD T+N +I S+ ++ K +
Sbjct: 551 LPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610
Query: 312 VFKSLMHSKEKPTLPTFNSMIIN-YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+ + S KP L T+N+++ +G ++ KA+Y+ +M + ++PS +T+ ++
Sbjct: 611 LLHEMKMSSIKPNLITYNTLVAGLFGTGAVE-KAKYLLNEMVSAGFSPSSLTHRRVLQAC 669
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
+ +I + + G ++ N +L+ C +G+ +A ++ E G+ PD+
Sbjct: 670 SQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDT 729
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQS 484
T+ L + K++ + +M I PN + TF++ L G +S
Sbjct: 730 ITFNALILGHCKSSHLDNAFATYAQMLHQNISPN-------IATFNTLLGGLES 776
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 144/352 (40%), Gaps = 32/352 (9%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL------- 200
Y+ L+A + GQ A + M+ +G P+ + Y I + T+ +A
Sbjct: 207 YNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMV 266
Query: 201 ------------------------AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
++A F++M + PN VTY L+ + A+A
Sbjct: 267 RNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVG-AAPNHVTYCTLIDSLAKAGRG 325
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
++ +L E+ + D+ TY +MD GK G E++ L S+ P+ +T+ +L
Sbjct: 326 KELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVL 385
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
ID+ K D+ EQV + P + TF+S+I + K L KA + M
Sbjct: 386 IDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGI 445
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
P+ +TY +I + A E++ ++ G + +++++ NG EA
Sbjct: 446 NPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMA 505
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
LF+++ G++ D Y L KA K + + ++P+ +
Sbjct: 506 LFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVY 557
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 123/253 (48%), Gaps = 11/253 (4%)
Query: 171 MRNSGCRPDPSVYNALITA---HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
M N+G D +VYN L+ H TR L + LG P+ +T+N L+
Sbjct: 685 MMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLG--------SGIAPDTITFNALI 736
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
++ ++D A + ++ ++P+I T+N ++ G I E +VL M+ + +
Sbjct: 737 LGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLE 796
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P+ +T+++L +GK+ + +++ ++ P + T+N++I ++ KA + +A+ +
Sbjct: 797 PNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKEL 856
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F+ M P+ TY+ +++ + N + ++ ++ + G TL+ + A+
Sbjct: 857 FKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSK 916
Query: 408 NGLPTEADLLFEN 420
G+ +A L +N
Sbjct: 917 PGMTWQAQRLLKN 929
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 117/287 (40%), Gaps = 15/287 (5%)
Query: 177 RP-DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
RP DP+ NAL+ +H R A+A + +P V YNILL A + +
Sbjct: 69 RPADPASLNALLYSHCRLRLLRPAIAL----------LRSSRPTTVAYNILLAALSDHAH 118
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
A+ E+ + + D T N ++ +NG + ++ R D+I +N
Sbjct: 119 AP---AVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHAL-DVIGWNT 174
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
LI Y + V + + +N+++ + +A A V M
Sbjct: 175 LIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAG 234
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
P+ TY I Y V A ++++ + + G + V TL+A++ C +G +EA
Sbjct: 235 VDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAY 294
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
LF +G P+ TY L + KA + + LL M G+V
Sbjct: 295 ALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVV 341
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 140/341 (41%), Gaps = 30/341 (8%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALG 205
Y+ L+A + A + +EM G D N L+ D A ALA G
Sbjct: 106 YNILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGG 162
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+ +++ +N L+ + + ++ + L D+ YN ++ +
Sbjct: 163 GIHAL--------DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGF 214
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ G + VL MK P++ T+ I Y + + ++ +++ ++ + +
Sbjct: 215 CRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDV 274
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T ++++ + +A +F++M + P+ +TY T+ R +E+
Sbjct: 275 VTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTY---CTLIDSLAKAGRGKELLSL 331
Query: 386 LSKL---GKDMKVSTLNAMLEAYCMNGLPTEAD--LLFENSHNMGVTPDSSTYKLLYKAY 440
L ++ G M + T A+++ G E L F S N+ +P+ TY +L A
Sbjct: 332 LGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNL--SPNGVTYTVLIDAL 389
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
KA+ + +++L ME+ I PN + TFSS + G
Sbjct: 390 CKAHNVDEAEQVLLEMEEKSISPN-------VVTFSSVING 423
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 160/336 (47%), Gaps = 5/336 (1%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
+ F+W Q Y T Y+ L+ V+ K G+ +++M +GC P+ Y L
Sbjct: 1 MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYL-- 58
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
L + +A+ +A F+ M + C PN+ +Y+IL+ + + VD+ L E+ +
Sbjct: 59 --LRSLCQAQRFEEARSVFRGMAA-QGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMID 115
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
P++ TY ++ K G +KE + SRM C PD + +N+LID + K+ +
Sbjct: 116 GGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGE 175
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
++F+ ++ PT+ T+NS++ + + G+ + +F+ M P+ T+ ++
Sbjct: 176 AYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLD 235
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
+ ++ A +F E+ LG V + N ++ C G P EA L GV P
Sbjct: 236 GFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGP 295
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
D +Y +L Y+K+ + KL + ++G+ P+
Sbjct: 296 DIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPD 331
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 148/332 (44%), Gaps = 7/332 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y L++ + K G+ + A+ LFS M GC PD VYN LI K + +A F
Sbjct: 125 YGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGF----SKKGDMGEAYRLF 180
Query: 208 QKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
++M +E+ C P + TYN LL ++ +V +LFK++ P+I+T+N ++D +
Sbjct: 181 EEM--LEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFC 238
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K G + E + M+S C PD++++N L+ + + +++ + ++ S P +
Sbjct: 239 KMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIV 298
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
++N +I Y K+ A +F ++ P +Y II V A +F ++
Sbjct: 299 SYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDM 358
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
G + + ++ C TE+ LF+ P Y LL KA
Sbjct: 359 IANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRS 418
Query: 447 ELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ V ++ + + G P+ LET S
Sbjct: 419 DDVCEIFHELTERGFSPDVEISKVILETLRRS 450
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 101/255 (39%), Gaps = 35/255 (13%)
Query: 221 VTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSR 280
++YN LL A++ D V + ++ + P+ YTY ++ + + +E SV
Sbjct: 18 LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
M + C P++ ++++LI + Q D+ ++ ++ +P + T+ S++ K
Sbjct: 78 MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
+A +F +M P + Y +I D SK G
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLI----------------DGFSKKGD--------- 172
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
M EAY LFE G P TY L +++ VQ L K M + G
Sbjct: 173 MGEAY----------RLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222
Query: 461 IVPNKRFFLEALETF 475
VPN F L+ F
Sbjct: 223 CVPNIFTFNNLLDGF 237
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 166/326 (50%), Gaps = 3/326 (0%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
A +++ ++ V + G+ A L MR+ PD +N LI A + A +A
Sbjct: 219 ATVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVAL 278
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
L + + G+ +P+ +TYN L+ AC+Q N+D A+F+E+ S PD++TYN ++
Sbjct: 279 ELLHEVRQAGL---RPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMV 335
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+G+ G +E E + + +PD +T+N L+ ++ K +++E+V + L+ + +
Sbjct: 336 SVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFR 395
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
T+N+MI YGK A ++ +M A+ TP +TY ++ G D +S A ++
Sbjct: 396 KDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKV 455
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+E++ G + T +A++ AY +G +A+ F+ GV PD Y ++ + +
Sbjct: 456 LEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFAR 515
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFF 468
++ + L + M ++G P+ +
Sbjct: 516 SDETRKLMVLYRAMIKDGYKPDDGLY 541
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 147/340 (43%), Gaps = 11/340 (3%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG--QTRLAMWLFSEMRNSGCR 177
G+ D Q L+ R + D ++ LI K G +A+ L E+R +G R
Sbjct: 235 GRFDDARQLLDAMRDQDIE----PDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLR 290
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
PD YN LI+A + L A+ F++M E C+P++ TYN ++ +
Sbjct: 291 PDAITYNTLISAC----SQGSNLDDAVAVFEEMIASE-CRPDLWTYNAMVSVHGRCGKAQ 345
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ +FKEL E PD TYN ++ A+ K G ++ +E V + + D IT+N +I
Sbjct: 346 EAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMI 405
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
YGK D ++ + P T+ ++ + GK +A V ++M
Sbjct: 406 HMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLK 465
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P+ +T+ +I Y A FD + + G ML+ + + + +L
Sbjct: 466 PTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVL 525
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
+ G PD Y++L A K N + ++ +++ ME
Sbjct: 526 YRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDME 565
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 150/301 (49%), Gaps = 11/301 (3%)
Query: 182 VYNALITAHLHTR--DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQV 239
V+NA++ + + D A+ L A M+ + +P++V++N L+ A A++ +
Sbjct: 223 VFNAMMGVYARSGRFDDARQLLDA------MRDQD-IEPDLVSFNTLINARAKSGCLAAG 275
Query: 240 NAL--FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
AL E+ ++ L PD TYN ++ A + + + +V M +++C+PD+ T+N ++
Sbjct: 276 VALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMV 335
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+G+ + E +FK L+ +P T+NS++ + K + E V +++ +
Sbjct: 336 SVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFR 395
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
ITY +I MYG + A ++DE+ +G T ++++ +EA +
Sbjct: 396 KDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKV 455
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
E + G+ P T+ L AY K+ ++ ++ RM ++G+ P++ +L L+ F+
Sbjct: 456 LEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFAR 515
Query: 478 S 478
S
Sbjct: 516 S 516
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/392 (20%), Positives = 155/392 (39%), Gaps = 70/392 (17%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH------------- 190
D Y+ +++V G+ G+ + A +F E+ G +PD YN+L+ A
Sbjct: 327 DLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVC 386
Query: 191 ------------------LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
+H K L ALG + +M+ + C P+ VTY +L+ + +
Sbjct: 387 EELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIG-CTPDAVTYTVLVDSLGK 445
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+ + + +E+ ++ L P + T++ ++ AY K+G + E RM + KPD +
Sbjct: 446 MDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLA 505
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+ +++D + + K+ ++++++ KP + ++ K + E V Q M
Sbjct: 506 YLVMLDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDME 565
Query: 353 A------MKYTPSFITYECI---------ITMYGYCDNVSRAREIFDELSKLGKDMK--- 394
A + + I ECI + GY + I D K+GK K
Sbjct: 566 AVFEMNPLVISSILIKAECISQGASLLKRACLQGYEPDGKSLLSILDAYEKMGKHEKGLS 625
Query: 395 ---------------VSTLNAMLEAYCMNGLPTEADLLFENSHNM---GVTPDSSTYKLL 436
+S + ML C NG +A + + D Y+ L
Sbjct: 626 LLEWIRQHVPNSHNLISECSIML--LCKNGKIVDAIQEYSRKQMLKRGSFGQDCDLYEYL 683
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+A + ++ M+ GIVP+++ F
Sbjct: 684 ITYLEEAELFPEACQVFCDMQFLGIVPSQKVF 715
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/390 (20%), Positives = 169/390 (43%), Gaps = 44/390 (11%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ E GK W Q + ++++ D I++ LI + G A +F M
Sbjct: 754 MIEAYGKLKLWQQAENFVKGLKQESG--VDRRIWNALIHAYAESGLYEHARAIFDIMIKK 811
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P N ++ A L + L + Q + K + T ++L A A+A
Sbjct: 812 GPLPTVESVNGMMRA-LIVDGRLDELYVVVQELQDLD----IKISKSTVLLMLEAFAKAG 866
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+V +V ++ + + P+++ Y ++ N +++E +++ M+ KPD++ N
Sbjct: 867 DVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLN 926
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY------------------- 335
L+ Y FD+ +V+ S++ + +P T+N++I+ Y
Sbjct: 927 TLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKR 986
Query: 336 ----------------GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
GKA+L +A+ +F++M Y + Y ++ +Y N S+A
Sbjct: 987 GLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKA 1046
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+ + + G + ++T++ ++ +Y +G P EA+ + + + + + Y + A
Sbjct: 1047 EHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDA 1106
Query: 440 YTKANMKEL-VQKLLKRMEQNGIVPNKRFF 468
Y + L + KLL+ M+++G+ P+ + +
Sbjct: 1107 YLRNRDYSLGITKLLE-MKRDGVEPDHQVW 1135
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 142/320 (44%), Gaps = 25/320 (7%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT---RDKAKALAKALGYF 207
++ K G M +++ M+ +G P+ +Y +I+ H RD +A+
Sbjct: 858 MLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAE----- 912
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
M+G KP++V N LL N D+ ++ + E+ L PD TYN ++ Y +
Sbjct: 913 --MEGAG-FKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSR 969
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
N +E ++L M P + ++ +L+ + GK + +++ + +F+ + +
Sbjct: 970 NFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSI 1029
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
++ M+ Y AR KAE++ M P+ T ++T YG + A ++ + L
Sbjct: 1030 YHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLK 1089
Query: 388 KLGKDMKVSTL--NAMLEAYCMN-----GLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
++++STL + +L+AY N G+ L E + GV PD + +A
Sbjct: 1090 S--SNLEISTLPYSTVLDAYLRNRDYSLGITK----LLEMKRD-GVEPDHQVWTSFIRAA 1142
Query: 441 TKANMKELVQKLLKRMEQNG 460
+ + LLK ++ G
Sbjct: 1143 SLCEQTDDAILLLKSLQDCG 1162
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 160/336 (47%), Gaps = 5/336 (1%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
+ F+W Q Y T Y+ L+ V+ K G+ +++M +GC P+ Y L
Sbjct: 1 MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYL-- 58
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
L + +A+ +A F+ M + C PN+ +Y+IL+ + + VD+ L E+ +
Sbjct: 59 --LRSLCQAQRFEEARSVFRGMAA-QGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMID 115
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
P++ TY ++ K G +KE + SRM C PD + +N+LID + K+ +
Sbjct: 116 GGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGE 175
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
++F+ ++ PT+ T+NS++ + + G+ + +F+ M P+ T+ ++
Sbjct: 176 AYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLD 235
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
+ ++ A +F E+ LG V + N ++ C G P EA L GV P
Sbjct: 236 GFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGP 295
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
D +Y +L Y+K+ + KL + ++G+ P+
Sbjct: 296 DIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPD 331
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 148/332 (44%), Gaps = 7/332 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y L++ + K G+ + A+ LFS M GC PD VYN LI K + +A F
Sbjct: 125 YGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGF----SKKGDMGEAYRLF 180
Query: 208 QKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
++M +E+ C P + TYN LL ++ +V +LFK++ P+I+T+N ++D +
Sbjct: 181 EEM--LEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFC 238
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K G + E + M+S C PD++++N LI + + +++ + ++ S P +
Sbjct: 239 KMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIV 298
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
++N +I Y K+ A +F ++ P +Y II V A +F ++
Sbjct: 299 SYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDM 358
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
G + + ++ C TE+ LF+ P Y LL KA
Sbjct: 359 IANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRS 418
Query: 447 ELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ V ++ + + G P+ LET S
Sbjct: 419 DDVCEIFHELTERGFSPDVEISKVILETLRRS 450
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 101/255 (39%), Gaps = 35/255 (13%)
Query: 221 VTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSR 280
++YN LL A++ D V + ++ + P+ YTY ++ + + +E SV
Sbjct: 18 LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
M + C P++ ++++LI + Q D+ ++ ++ +P + T+ S++ K
Sbjct: 78 MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
+A +F +M P + Y +I D SK G
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLI----------------DGFSKKGD--------- 172
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
M EAY LFE G P TY L +++ VQ L K M + G
Sbjct: 173 MGEAY----------RLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222
Query: 461 IVPNKRFFLEALETF 475
VPN F L+ F
Sbjct: 223 CVPNIFTFNNLLDGF 237
>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1429
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 184/382 (48%), Gaps = 26/382 (6%)
Query: 104 VKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRL 163
V++ ++ CF++ + +G+ + W + LEVF W+ + WY + + + ++AV+GK Q L
Sbjct: 137 VQMTPTDFCFVV-KWVGQ-ENWQRALEVFEWLNLRHWYSPNARMLATILAVLGKANQEAL 194
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGM-----ER-CK 217
A+ +F S VYNA++ + T G F K++GM ER C+
Sbjct: 195 AVEIFIRA-ESTVDNTVQVYNAMMGVYART-----------GRFNKVQGMLDLMRERGCE 242
Query: 218 PNIVTYNIL----LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
P++V++N L L+A A NV L E+ S L PDI TYN ++ A + ++E
Sbjct: 243 PDLVSFNTLINARLKAGAMTPNV--AIELLNEVRRSGLRPDIITYNTLISACSRESNLEE 300
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
V M+++ C+PD+ T+N +I YG+ K EQ+FK L P T+NS++
Sbjct: 301 AVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLY 360
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
+ + K + + +M M + +TY II MYG A +++ ++ G+
Sbjct: 361 AFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTP 420
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
T ++++ EA + N+GV P TY L Y +A + ++
Sbjct: 421 DAITYTVLIDSLGKANKMVEAANVMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETF 480
Query: 454 KRMEQNGIVPNKRFFLEALETF 475
M ++GI P++ + L+ F
Sbjct: 481 DCMRRSGIRPDQLAYSVMLDVF 502
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 5/296 (1%)
Query: 163 LAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVT 222
+A+ L +E+R SG RPD YN LI+A + L +A+ F M+ C+P++ T
Sbjct: 265 VAIELLNEVRRSGLRPDIITYNTLISAC----SRESNLEEAVKVFDDMEA-HYCQPDLWT 319
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
YN ++ + + LFKEL PD TYN ++ A+ + G + +++ + + M
Sbjct: 320 YNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMV 379
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
D +T+N +I YGK+ Q+++ + S P T+ +I + GKA
Sbjct: 380 QMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKANKMV 439
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
+A V +M + P+ TY +I Y A E FD + + G + ML
Sbjct: 440 EAANVMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVML 499
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
+ + T+A +L+ G+TPD + Y + + + N E +Q++++ ME+
Sbjct: 500 DVFLRFDEATKAMMLYREMVRDGITPDPTVYGAMLRNLGRENKVEDIQRIIRDMEE 555
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 156/347 (44%), Gaps = 6/347 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ E GK W Q E +QR D +++ LI G A +F+ M
Sbjct: 741 VIETYGKLKLW-QKAESLVGNLRQRCTNVDRKVWNALIQAYAASGCYEQARAVFNTMMRD 799
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P N L+ A L + + L Q M G + K +I+ ++L A A+
Sbjct: 800 GPSPTVDSINGLLQA-LIVDGRLEELYVVTQEIQDM-GFQISKSSIL---LILDAFARVS 854
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
N+ + +++ + + P ++ Y ++ K ++++E++++ M+ +PD+ +N
Sbjct: 855 NIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWN 914
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++ Y F K Q+++ + +P T+N++I+ Y + + + +M +
Sbjct: 915 SMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRI 974
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P TY+ +I +G V A E+F+EL G + S + M++ Y +G ++A
Sbjct: 975 GLEPKLDTYKSLIAAFGKQQLVVDAEELFEELLSKGSKLDRSFYHIMMKIYRNSGNHSKA 1034
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ L + GV P +T LL +Y + + +K+L +++ G+
Sbjct: 1035 EKLLSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGL 1081
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/382 (19%), Positives = 159/382 (41%), Gaps = 37/382 (9%)
Query: 140 WYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI----------TA 189
W+ +Y LI + T A +FS+MR +G +P S+Y +++ TA
Sbjct: 659 WFTGSCTMYESLIQCCEENEFTAEASQIFSDMRFNGVKPSKSLYRSMVLMYCKMGFPETA 718
Query: 190 H----------------------LHTRDKAKALAKALGYFQKMKGMERC-KPNIVTYNIL 226
H + T K K KA ++ +RC + +N L
Sbjct: 719 HYLIDLAEIEGMPFDKISIDVAVIETYGKLKLWQKAESLVGNLR--QRCTNVDRKVWNAL 776
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
++A A + +Q A+F + +P + + NG++ A +G ++E+ V ++
Sbjct: 777 IQAYAASGCYEQARAVFNTMMRDGPSPTVDSINGLLQALIVDGRLEELYVVTQEIQDMGF 836
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
+ + L++D++ + + +++++ + + PT+ + MI K + E
Sbjct: 837 QISKSSILLILDAFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEA 896
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+ +M + P + ++ +Y D+ + +I+ + + G T N ++ YC
Sbjct: 897 MVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYC 956
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
+ P E L +G+ P TYK L A+ K + ++L + + G ++
Sbjct: 957 RDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEELLSKGSKLDRS 1016
Query: 467 FFLEALETFSSSLAGSQSGSAK 488
F+ ++ + +S G+ S + K
Sbjct: 1017 FYHIMMKIYRNS--GNHSKAEK 1036
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/254 (20%), Positives = 108/254 (42%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+P++ +N +LR + + +++ + E L PD TYN ++ Y ++ +E S
Sbjct: 907 RPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCS 966
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
++ M+ +P + T+ LI ++GK+Q E++F+ L+ K ++ M+ Y
Sbjct: 967 LMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEELLSKGSKLDRSFYHIMMKIYR 1026
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
+ KAE + M P+ T ++ YG A ++ L ++G +
Sbjct: 1027 NSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSLSTL 1086
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
+++++AY N + G+ PD + +A + + LL+ +
Sbjct: 1087 PYSSVIDAYLKNKDYSVGIQKLVEMKKEGLEPDHRIWTCFIRAASLSEHTHDAILLLQAL 1146
Query: 457 EQNGIVPNKRFFLE 470
+ +G R E
Sbjct: 1147 QDSGFDLPSRLITE 1160
>gi|227202654|dbj|BAH56800.1| AT2G41720 [Arabidopsis thaliana]
Length = 815
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 119/507 (23%), Positives = 223/507 (43%), Gaps = 36/507 (7%)
Query: 3 LTNLSPYSLRLSTLSSSSASSSSSSSSSSFNQ--SSSQNYNFTHRHIPLSLRTRPRTGIC 60
+ ++ + L SS + ++ +S +F + S S NY+ + +++ + I
Sbjct: 1 MATVTNFKLVTPPESSRADKPGATKASDAFQEKKSVSVNYDRGEHEVSVNIGGLRKADIP 60
Query: 61 CVWTRPRSKRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELG 120
+ R R + R ++ E+V LM + + E + LN +V ++ +L EL
Sbjct: 61 RRY-RIRVENDRFQKDWSVSEVVDRLM-ALNRWEEVDGVLNSWVGRFARKNFPVLIRELS 118
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
+ C+ VF+WM+ Q+ Y A IY+ +I + + A LF EM+ C+PD
Sbjct: 119 RRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDA 178
Query: 181 SVYNALITAH---------------------LHTRDKAKALAKALGYFQKMK-GMERCK- 217
Y+ALI AH +R L A G + +E CK
Sbjct: 179 ETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKK 238
Query: 218 -------PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
P++VT+NI+L A R + + F+ + + + PD T+N ++ K G
Sbjct: 239 MTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQ 298
Query: 271 IKEMESVLSRM--KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
+ + + M K +C+PD++TF ++ Y + + VF++++ KP + ++
Sbjct: 299 SSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY 358
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
N+++ Y + G A V + P ++Y C++ YG +A+E+F + K
Sbjct: 359 NALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK 418
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
+ V T NA+++AY NG EA +F G+ P+ + L A +++ K
Sbjct: 419 ERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVN 478
Query: 449 VQKLLKRMEQNGIVPNKRFFLEALETF 475
V +L + GI N + A+ ++
Sbjct: 479 VDTVLSAAQSRGINLNTAAYNSAIGSY 505
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 166/362 (45%), Gaps = 50/362 (13%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRN--SGCRPDPSVYNALITAHLHTRDKAKALA 201
DT ++ +I + K GQ+ A+ LF+ MR + CRPD + +++ HL++
Sbjct: 282 DTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIM--HLYSVKGEIENC 339
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+A+ F+ M E KPNIV+YN L+ A A ++ ++ ++ + PD+ +Y +
Sbjct: 340 RAV--FEAMVA-EGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL 396
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR-------QAFDKMEQ--- 311
+++YG++ + + V M+ + KP+++T+N LID+YG + F +MEQ
Sbjct: 397 LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 456
Query: 312 ---------VFKSLMHSKEKPTLPT----------------FNSMIINYGKARLQGKAEY 346
+ + SK+K + T +NS I +Y A KA
Sbjct: 457 KPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIA 516
Query: 347 VFQKMTAMKYTPSFITYECIIT----MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
++Q M K +T+ +I+ M Y + +S +E+ D L K++ S L
Sbjct: 517 LYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLC--- 573
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
AY G TEA+ +F G PD Y + AY + +LL ME NGI
Sbjct: 574 -AYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELLLEMEANGIE 632
Query: 463 PN 464
P+
Sbjct: 633 PD 634
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 124/283 (43%), Gaps = 5/283 (1%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
KQ I D Y+ L+ G+ Q A +F MR +P+ YNALI A+
Sbjct: 382 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAY----GS 437
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
LA+A+ F++M+ + KPN+V+ LL AC++++ V+ + + +
Sbjct: 438 NGFLAEAVEIFRQME-QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTA 496
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
YN + +Y +++ ++ M+ + K D +TF +LI + + + K +
Sbjct: 497 AYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 556
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
T ++S++ Y K +AE +F +M P I Y ++ Y +
Sbjct: 557 EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKW 616
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
+A E+ E+ G + +A++ A+ G P+ +L +
Sbjct: 617 GKACELLLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMD 659
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 105/256 (41%), Gaps = 21/256 (8%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
AD+ ++ LI+ + + A+ EM + VY++++ A+ K + +
Sbjct: 528 ADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAY----SKQGQVTE 583
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A F +MK M C+P+++ Y +L A + + L E+ + + PD + +M
Sbjct: 584 AESIFNQMK-MAGCEPDVIAYTSMLHAYNASEKWGKACELLLEMEANGIEPDSIACSALM 642
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
A+ K G + ++ M+ + F + + Q + + + + +
Sbjct: 643 RAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMM-----D 697
Query: 323 PTLPTF-----NSMIINYGKARLQGKAEY---VFQKMTAMKYTPSFITYECIITMYGYCD 374
P LP+ N M+ +GK+ GK E +F K+ A + TY ++
Sbjct: 698 PYLPSLSIGLTNQMLHLFGKS---GKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVG 754
Query: 375 NVSRAREIFDELSKLG 390
N + E+ + +S G
Sbjct: 755 NWRKYIEVLEWMSGAG 770
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 159/342 (46%), Gaps = 5/342 (1%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
++R D Y L+A + K G+ +A+ +F + N C PD Y+ LI K
Sbjct: 258 RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLC----K 313
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
A L +A F+KM+ C+P++VT+ L+ + + + + + + + P++
Sbjct: 314 AGRLDEACKLFEKMR-ENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVI 372
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TY+ ++D K G +++ + V RM +P+++T+N LI + D + + +
Sbjct: 373 TYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEM 432
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+ P + T+N++I K +A +F M A P ITY C+I + + +
Sbjct: 433 TATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERI 492
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
AR +FD++ K V T + ++E YC GL +A+ L E +PD TY L
Sbjct: 493 DMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSL 552
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ K +++LKRM + G PN + ++ F +
Sbjct: 553 VDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRA 594
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 155/349 (44%), Gaps = 36/349 (10%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH------------L 191
D YS LIA + K G+ A LF +MR + C PD + AL+ L
Sbjct: 300 DVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 359
Query: 192 HTRDKAKALAKALGY-------------------FQKM--KGMERCKPNIVTYNILLRAC 230
T + + Y F++M +G+E PN+VTYN L+
Sbjct: 360 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIE---PNVVTYNSLIHGF 416
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
VD L +E+ + PDI TYN ++D K G E + MK+ C PD+
Sbjct: 417 CMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDV 476
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
IT++ LI + K + D +F ++ P + TF++++ Y A L AE + ++
Sbjct: 477 ITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEE 536
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M A +P TY ++ + + AR + ++K G V T A+++A+C G
Sbjct: 537 MVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGK 596
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
PT A L E GV P+ TY+ L + E +K+L+R+E++
Sbjct: 597 PTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERD 645
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 174/400 (43%), Gaps = 37/400 (9%)
Query: 100 LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG 159
+N + KV + +LL +E+ K+ + YS +I ++
Sbjct: 168 INGFCKVHKVHRAYLLLKEM-----------------KESGLAPNVVTYSTVIHGFCRQT 210
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT--RDKAKALAKALGYFQKMKGMERCK 217
+ A LF +M +GC P+ YN L++ D+A L + + +G++
Sbjct: 211 KVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEM----RERGLQ--- 263
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+ +Y+ L+ + +D +F++ PD+ Y+ ++ K G + E +
Sbjct: 264 PDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKL 323
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
+M+ N C+PD++TF L+D K + +QV +++ P + T++S+I K
Sbjct: 324 FEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCK 383
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKV 395
A+ VF++M P+ +TY +I +G+C + V A + +E++ G +
Sbjct: 384 TGQVRDAQEVFKRMIVRGIEPNVVTYNSLI--HGFCMTNGVDSALLLMEEMTATGCLPDI 441
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
T N +++ C G EA+ LF + PD TY L + K ++ + L
Sbjct: 442 ITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDD 501
Query: 456 MEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTRSL 495
M + ++P+ + TFS+ + G + D R L
Sbjct: 502 MLKQAVLPD-------VVTFSTLVEGYCNAGLVDDAERLL 534
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 149/319 (46%), Gaps = 12/319 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I + K G A L EMR SG PD ++YN +I H KA+ AKAL YF
Sbjct: 62 YAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVI----HALCKARNTAKALDYF 117
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ M+ C+ N++T+ I++ +A + + F ++ + P+ +TYN +++ + K
Sbjct: 118 RSME----CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCK 173
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ +L MK + P+++T++ +I + ++ D ++F+ ++ + P L T
Sbjct: 174 VHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVT 233
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDE 385
+N+++ + L +A + +M P +Y+ + M G C + A ++F++
Sbjct: 234 YNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTL--MAGLCKTGKIDMALKVFED 291
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
S V + ++ C G EA LFE PD T+ L K +
Sbjct: 292 NSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDR 351
Query: 446 KELVQKLLKRMEQNGIVPN 464
+ Q++L+ ME PN
Sbjct: 352 LQEAQQVLETMEDRNCTPN 370
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 113/266 (42%), Gaps = 9/266 (3%)
Query: 203 ALGYFQ---KMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
AL +F K +G + N+ TYN L A +AR +D+ + K + P+++TY
Sbjct: 7 ALRFFHWASKQQGFDH---NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYA 63
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
V+ K+G + + +L M+ + PD +N +I + K + K F+S+
Sbjct: 64 VVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECE 123
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
K + T+ MI KA +A F KM P+ TY +I + V RA
Sbjct: 124 K---NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRA 180
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+ E+ + G V T + ++ +C A LF G P+ TY L
Sbjct: 181 YLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSG 240
Query: 440 YTKANMKELVQKLLKRMEQNGIVPNK 465
+ + + +LL M + G+ P+K
Sbjct: 241 LCRNGLMDEAYELLDEMRERGLQPDK 266
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 113/258 (43%), Gaps = 8/258 (3%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
+F M KQ + D +S L+ G A L EM S C PD Y +L+
Sbjct: 498 LFDDMLKQA-VLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGF 556
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
K + +A ++M C+PN+VTY L+ A +A L +E+ +
Sbjct: 557 C----KVGRMVEARRVLKRM-AKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNG 611
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ-CKPDIITFNLLIDSYGKRQAFDKM 309
+ P++ TY ++ + G ++E +L R++ ++ CK D+ + +++D +
Sbjct: 612 VQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAA 671
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT-AMKYTPSFITYECIIT 368
++ +++ S P + ++I + + GKA V ++MT + K P+ YE +I
Sbjct: 672 LELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQ 731
Query: 369 MYGYCDNVSRAREIFDEL 386
A + DEL
Sbjct: 732 ELAREGRHEEANALADEL 749
>gi|2335106|gb|AAC02776.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 810
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 119/507 (23%), Positives = 223/507 (43%), Gaps = 36/507 (7%)
Query: 3 LTNLSPYSLRLSTLSSSSASSSSSSSSSSFNQ--SSSQNYNFTHRHIPLSLRTRPRTGIC 60
+ ++ + L SS + ++ +S +F + S S NY+ + +++ + I
Sbjct: 1 MATVTNFKLVTPPESSRADKPGATKASDAFQEKKSVSVNYDRGEHEVSVNIGGLRKADIP 60
Query: 61 CVWTRPRSKRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELG 120
+ R R + R ++ E+V LM + + E + LN +V ++ +L EL
Sbjct: 61 RRY-RIRVENDRFQKDWSVSEVVDRLM-ALNRWEEVDGVLNSWVGRFARKNFPVLIRELS 118
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
+ C+ VF+WM+ Q+ Y A IY+ +I + + A LF EM+ C+PD
Sbjct: 119 RRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDA 178
Query: 181 SVYNALITAH---------------------LHTRDKAKALAKALGYFQKMK-GMERCK- 217
Y+ALI AH +R L A G + +E CK
Sbjct: 179 ETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKK 238
Query: 218 -------PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
P++VT+NI+L A R + + F+ + + + PD T+N ++ K G
Sbjct: 239 MTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQ 298
Query: 271 IKEMESVLSRM--KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
+ + + M K +C+PD++TF ++ Y + + VF++++ KP + ++
Sbjct: 299 SSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY 358
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
N+++ Y + G A V + P ++Y C++ YG +A+E+F + K
Sbjct: 359 NALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK 418
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
+ V T NA+++AY NG EA +F G+ P+ + L A +++ K
Sbjct: 419 ERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVN 478
Query: 449 VQKLLKRMEQNGIVPNKRFFLEALETF 475
V +L + GI N + A+ ++
Sbjct: 479 VDTVLSAAQSRGINLNTAAYNSAIGSY 505
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 156/362 (43%), Gaps = 62/362 (17%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRN--SGCRPDPSVYNALITAHLHTRDKAKALA 201
DT ++ +I + K GQ+ A+ LF+ MR + CRPD + +++ HL++
Sbjct: 282 DTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIM--HLYSVKGEIENC 339
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+A+ F+ M E KPNIV+YN L+ A A ++ ++ ++ + PD+ +Y +
Sbjct: 340 RAV--FEAMVA-EGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL 396
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+++YG++ + + V M+ + KP+++T+N LID+YG + ++F+ +
Sbjct: 397 LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 456
Query: 322 KPTL-----------------------------------PTFNSMIINYGKARLQGKAEY 346
KP + +NS I +Y A KA
Sbjct: 457 KPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIA 516
Query: 347 VFQKMTAMKYTPSFITYECIIT----MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
++Q M K +T+ +I+ M Y + +S +E+ D L K+ +V
Sbjct: 517 LYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEGQV------- 569
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
TEA+ +F G PD Y + AY + +L ME NGI
Sbjct: 570 ---------TEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIE 620
Query: 463 PN 464
P+
Sbjct: 621 PD 622
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 182/404 (45%), Gaps = 12/404 (2%)
Query: 65 RPRSKRGRKSEELESKELVRVLMR--SFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKS 122
R R + R ++ E+V L++ + D E L LN++V ++ LL E+ +
Sbjct: 83 RLRVEADRFQKDWSVSEVVERLLKLNHWDDVEGL---LNRWVGRFSRKNFPLLIREITQI 139
Query: 123 DKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSV 182
++VFRWM+ Q+ Y A IY+ +I + + A LF EM+ C+PD
Sbjct: 140 GSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAET 199
Query: 183 YNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL 242
YNALI AH +A A+ M P+ TYN L+ AC + N + +
Sbjct: 200 YNALINAH----GRAGQWRWAMNIMDDML-RAAIPPSRSTYNNLINACGSSGNWKEALNV 254
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
K++ E+ + PD+ T+N V+ AY + ++ S MK +PD T N++I K
Sbjct: 255 CKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVK 314
Query: 303 RQAFDKMEQVFKSLMHSKEK--PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
K +F S+ + + P + TF ++I Y + F M A P+
Sbjct: 315 LGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNI 374
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
++Y +I Y A +F+E+ K G V + ++L AY +G P +A +FE
Sbjct: 375 VSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFEL 434
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
P+ +Y L AY + ++L ME+NG+ PN
Sbjct: 435 MRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPN 478
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 165/372 (44%), Gaps = 20/372 (5%)
Query: 95 PLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYI-ADTGIYSKLIA 153
P TLN + +C + + GK+ +++F M+++R D ++ +I
Sbjct: 300 PDTTTLNIVI------YCLVKLGQNGKA------IDIFNSMKEKRSECYPDVVTFTTIIH 347
Query: 154 VMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL-HTRDKAKALAKALGYFQKMKG 212
+ GQ F+ M G +P+ YNALI A+ H DK +A F ++K
Sbjct: 348 LYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDK-----EAFSVFNEIKK 402
Query: 213 MERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIK 272
P++V+Y LL A ++ ++ +F+ + + P++ +YN ++DAYG G++
Sbjct: 403 -NGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLT 461
Query: 273 EMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
E +L M+ N +P+I++ L+ + G+ K++ V + K +NS I
Sbjct: 462 EAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAI 521
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKD 392
+Y KA +++ M K P +TY +I+ A DE+ L
Sbjct: 522 GSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIP 581
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
+ ++++ AY G TEA+ +F +G PD TY + AY A E L
Sbjct: 582 LSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASAL 641
Query: 453 LKRMEQNGIVPN 464
ME + + P+
Sbjct: 642 FLEMETDDVQPD 653
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 146/329 (44%), Gaps = 5/329 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI G + A +F+E++ +G PD Y +L+ A+ K+ KA+ F
Sbjct: 377 YNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAY----GKSGKPEKAMKVF 432
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ M+ CKPN+V+YN L+ A + + + E+ + + P+I + ++ A G+
Sbjct: 433 ELMR-RNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGR 491
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G +++SVLS + K + +N I SY +DK +++++ K KP T
Sbjct: 492 CGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVT 551
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N +I K G+A +M +K S Y +I Y V+ A +F ++
Sbjct: 552 YNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMK 611
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+G V T AM+ AY + +A LF V PDS L +A+ K
Sbjct: 612 MVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPA 671
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFS 476
V L + M + I N F E + S
Sbjct: 672 KVLVLAEFMREKKIPFNNSSFFEMVSACS 700
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 136/317 (42%), Gaps = 39/317 (12%)
Query: 199 ALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+L ++ F+ MK + C N + YN+++R A+ VDQ LF E+ + PD T
Sbjct: 141 SLEHSVQVFRWMKNQKNYCARNDI-YNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAET 199
Query: 258 YNGVMDAYGK-----------------------------------NGMIKEMESVLSRMK 282
YN +++A+G+ +G KE +V +M
Sbjct: 200 YNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT 259
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
N PD++T N+++ +Y + + K+ F+ + + +P T N +I K G
Sbjct: 260 ENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNG 319
Query: 343 KAEYVFQKMTAMKYT--PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
KA +F M + P +T+ II +Y C + + F+ + G + + NA
Sbjct: 320 KAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNA 379
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
++ AY +G+ EA +F G PD +Y L AY K+ E K+ + M +N
Sbjct: 380 LIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNH 439
Query: 461 IVPNKRFFLEALETFSS 477
PN + ++ + S
Sbjct: 440 CKPNLVSYNALIDAYGS 456
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 173/408 (42%), Gaps = 28/408 (6%)
Query: 102 KYVKVVRSEHC-------FLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAV 154
K +++R HC L + G + +E+ M++ I + L+A
Sbjct: 430 KVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICT-LLAA 488
Query: 155 MGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME 214
G+ GQ + S G + + + YN+ I ++L + KAL+ ++ M+ +
Sbjct: 489 CGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALS----LYRAMR-TK 543
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
+ KP+ VTYN+L+ C + + E+ + + Y+ V+ AY K G + E
Sbjct: 544 KVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEA 603
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
ES+ ++MK C+PD+IT+ +I +Y + ++K +F + +P +S++
Sbjct: 604 ESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRA 663
Query: 335 YGKARLQGK----AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
+ K K AE++ +K + F M C + REI + +
Sbjct: 664 FNKGGQPAKVLVLAEFMREKKIPFNNSSFF-------EMVSACSLLREWREIIGLIKLME 716
Query: 391 KDMKVST---LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ V + LN +L +G LF G + TY +L K A
Sbjct: 717 PSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEINFYTYSILLKNLLAAGNWR 776
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTRSL 495
++L+ ME+ G+ P+ + ++ +F+ + +G++ + + SL
Sbjct: 777 KYIEVLQWMEEAGLQPSVGMY-RSISSFAQNRSGAEYAAVIQERIESL 823
>gi|30688764|ref|NP_850356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75158748|sp|Q8RWS8.1|PP199_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g41720; AltName: Full=Protein EMBRYO DEFECTIVE 2654
gi|20268762|gb|AAM14084.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|21436141|gb|AAM51317.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330254931|gb|AEC10025.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 119/507 (23%), Positives = 223/507 (43%), Gaps = 36/507 (7%)
Query: 3 LTNLSPYSLRLSTLSSSSASSSSSSSSSSFNQ--SSSQNYNFTHRHIPLSLRTRPRTGIC 60
+ ++ + L SS + ++ +S +F + S S NY+ + +++ + I
Sbjct: 1 MATVTNFKLVTPPESSRADKPGATKASDAFQEKKSVSVNYDRGEHEVSVNIGGLRKADIP 60
Query: 61 CVWTRPRSKRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELG 120
+ R R + R ++ E+V LM + + E + LN +V ++ +L EL
Sbjct: 61 RRY-RIRVENDRFQKDWSVSEVVDRLM-ALNRWEEVDGVLNSWVGRFARKNFPVLIRELS 118
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
+ C+ VF+WM+ Q+ Y A IY+ +I + + A LF EM+ C+PD
Sbjct: 119 RRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDA 178
Query: 181 SVYNALITAH---------------------LHTRDKAKALAKALGYFQKMK-GMERCK- 217
Y+ALI AH +R L A G + +E CK
Sbjct: 179 ETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKK 238
Query: 218 -------PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
P++VT+NI+L A R + + F+ + + + PD T+N ++ K G
Sbjct: 239 MTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQ 298
Query: 271 IKEMESVLSRM--KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
+ + + M K +C+PD++TF ++ Y + + VF++++ KP + ++
Sbjct: 299 SSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY 358
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
N+++ Y + G A V + P ++Y C++ YG +A+E+F + K
Sbjct: 359 NALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK 418
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
+ V T NA+++AY NG EA +F G+ P+ + L A +++ K
Sbjct: 419 ERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVN 478
Query: 449 VQKLLKRMEQNGIVPNKRFFLEALETF 475
V +L + GI N + A+ ++
Sbjct: 479 VDTVLSAAQSRGINLNTAAYNSAIGSY 505
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 165/362 (45%), Gaps = 50/362 (13%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRN--SGCRPDPSVYNALITAHLHTRDKAKALA 201
DT ++ +I + K GQ+ A+ LF+ MR + CRPD + +++ HL++
Sbjct: 282 DTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIM--HLYSVKGEIENC 339
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+A+ F+ M E KPNIV+YN L+ A A ++ ++ ++ + PD+ +Y +
Sbjct: 340 RAV--FEAMVA-EGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL 396
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR-------QAFDKMEQ--- 311
+++YG++ + + V M+ + KP+++T+N LID+YG + F +MEQ
Sbjct: 397 LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 456
Query: 312 ---------VFKSLMHSKEKPTLPT----------------FNSMIINYGKARLQGKAEY 346
+ + SK+K + T +NS I +Y A KA
Sbjct: 457 KPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIA 516
Query: 347 VFQKMTAMKYTPSFITYECIIT----MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
++Q M K +T+ +I+ M Y + +S +E+ D L K++ S L
Sbjct: 517 LYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLC--- 573
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
AY G TEA+ +F G PD Y + AY + +L ME NGI
Sbjct: 574 -AYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIE 632
Query: 463 PN 464
P+
Sbjct: 633 PD 634
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 125/283 (44%), Gaps = 5/283 (1%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
KQ I D Y+ L+ G+ Q A +F MR +P+ YNALI A+
Sbjct: 382 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAY----GS 437
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
LA+A+ F++M+ + KPN+V+ LL AC++++ V+ + + +
Sbjct: 438 NGFLAEAVEIFRQME-QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTA 496
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
YN + +Y +++ ++ M+ + K D +TF +LI + + + K +
Sbjct: 497 AYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 556
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
T ++S++ Y K +AE +F +M P I Y ++ Y +
Sbjct: 557 EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKW 616
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
+A E+F E+ G + +A++ A+ G P+ +L +
Sbjct: 617 GKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMD 659
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 159/322 (49%), Gaps = 11/322 (3%)
Query: 146 GIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALG 205
G++ L + + + G A F +MR P P NAL LH K +
Sbjct: 186 GVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNAL----LHRLSKVGRGDLSRK 241
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+F+ M G K ++ TYNI++ + +++ +LF ++ E+ PDI TYN ++D +
Sbjct: 242 FFKDM-GAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGH 300
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE---K 322
GK G++ E + +MK C PD+IT+N LI+ + K F++M + F+ L K K
Sbjct: 301 GKLGLLDECICIFEQMKDADCDPDVITYNALINCFCK---FERMPKAFEFLHEMKANGLK 357
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P + T+++ I + K + +A F M + TP+ TY +I N++ A ++
Sbjct: 358 PNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKL 417
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+E+ + G + V T A+L+ C G EA+ +F N GV P+ TY L + K
Sbjct: 418 VEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIK 477
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
A E + +LK M++ I P+
Sbjct: 478 AKEMEYAKDILKEMKEKCIKPD 499
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 154/330 (46%), Gaps = 9/330 (2%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ LI GK G + +F +M+++ C PD YNALI K
Sbjct: 282 KEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFC----K 337
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+ + KA + +MK KPN+VTY+ + A + + + F ++ L P+ +
Sbjct: 338 FERMPKAFEFLHEMKA-NGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEF 396
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TY ++DA K G + E ++ + K +++T+ L+D + + E+VF+++
Sbjct: 397 TYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAM 456
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN- 375
+++ P T+ +++ + KA+ A+ + ++M P + Y I ++G C+
Sbjct: 457 LNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTI--LWGLCNES 514
Query: 376 -VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
+ A+ + E+ + G + +++AY +G TEA L E ++G+ TY
Sbjct: 515 RLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYC 574
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L K+ + + RM + G+ PN
Sbjct: 575 ALIDGLCKSGLVQEAMHHFGRMSEIGLQPN 604
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 156/360 (43%), Gaps = 30/360 (8%)
Query: 91 SDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSK 150
+D +P V T N + +CF FE + K+ ++L K + YS
Sbjct: 319 ADCDPDVITYNALI------NCFCKFERMPKAFEFLH-------EMKANGLKPNVVTYST 365
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
I K+G + A+ F +MR P+ Y +LI A+ KA LA+AL +++
Sbjct: 366 FIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANC----KAGNLAEALKLVEEI 421
Query: 211 --KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
G+ K N+VTY LL + + + +F+ + + +AP+ TY ++ + K
Sbjct: 422 LQAGI---KLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKA 478
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
++ + +L MK KPD++ + ++ ++ + + + S +
Sbjct: 479 KEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIY 538
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDEL 386
+++ Y K+ +A + ++M + + +TY +I G C + V A F +
Sbjct: 539 TTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALID--GLCKSGLVQEAMHHFGRM 596
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
S++G V+ A+++ C N A LF+ + G+ PD K+ Y A NMK
Sbjct: 597 SEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPD----KIAYTALIDGNMK 652
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 134/316 (42%), Gaps = 7/316 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + ++G+ + A +F M N+G P+ Y AL+ H KAK + A
Sbjct: 433 YTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALV----HGFIKAKEMEYAKDIL 488
Query: 208 QKMKGMERC-KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
++MK E+C KP+++ Y +L +++ L E+ ES + + Y +MDAY
Sbjct: 489 KEMK--EKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYF 546
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K+G E ++L M +T+ LID K + F + +P +
Sbjct: 547 KSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVA 606
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
+ +++ K A+ +F +M P I Y +I N+ A + D +
Sbjct: 607 VYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRM 666
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
++G ++ + A++ +G +A L + GV PD Y L K Y
Sbjct: 667 IEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKV 726
Query: 447 ELVQKLLKRMEQNGIV 462
+ +L M + G++
Sbjct: 727 DEALELQNEMAKRGMI 742
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 112/282 (39%), Gaps = 20/282 (7%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL---------------- 246
AL +F+ KG + Y IL+ AR NA+ KEL
Sbjct: 115 ALRFFEWAKGRIGFQHTSEAYCILVHILFCARFYSDANAVLKELICLRRVLPSWDVFDLL 174
Query: 247 --HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
++ P ++ + A + GM++E +M+ + P + N L+ K
Sbjct: 175 WATRNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVG 234
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
D + FK + + K ++ T+N MI K A +F +M +TP +TY
Sbjct: 235 RGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYN 294
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC-MNGLPTEADLLFENSHN 423
+I +G + IF+++ D V T NA++ +C +P + L E N
Sbjct: 295 SLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKAN 354
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
G+ P+ TY A+ K M + K M + + PN+
Sbjct: 355 -GLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNE 395
>gi|297827821|ref|XP_002881793.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
gi|297327632|gb|EFH58052.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
Length = 822
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/492 (24%), Positives = 214/492 (43%), Gaps = 34/492 (6%)
Query: 17 SSSSASSSSSSSSSSFNQSSSQNYNFTHRHIPLSLRTRP-RTGICCVWTRPRSKRGRKSE 75
SS + ++ +S +F + S + N+ +S+R R R R + R +
Sbjct: 15 SSRADKPGATKTSEAFQEKKSVSVNYDRGEHEVSIRVGGLRKADIPRRYRIRVENDRFQK 74
Query: 76 ELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWM 135
+ E+V LM + + E + LN +V ++ +L EL + C+ VF+WM
Sbjct: 75 DWSVSEVVDRLM-ALNRWEEVDGVLNSWVGRFARKNFPVLIRELSRRGCIELCVNVFKWM 133
Query: 136 QKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH----- 190
+ Q+ Y A IY+ +I + + A LF EM+ C+PD Y+ALI AH
Sbjct: 134 KSQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQ 193
Query: 191 ----------------LHTRDKAKALAKALGYFQKMK-GMERCK--------PNIVTYNI 225
+R L A G + +E CK P++VT+NI
Sbjct: 194 WRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWRQALEVCKKMTDNGVGPDLVTHNI 253
Query: 226 LLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM--KS 283
+L A R + + F+ + + + PD T+N ++ K G + V + M K
Sbjct: 254 VLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDVFNSMRDKR 313
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+C+PD++TF ++ Y R + VF++++ KP + ++N+++ Y +
Sbjct: 314 AECRPDVVTFTSIMHLYSVRGEIENCRAVFEAMLAEGLKPNIVSYNALMGAYAVHGMSEN 373
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A VF + P ++Y ++ YG +A+E+F + K + V T NA+++
Sbjct: 374 ALSVFGDIKRNGIVPDVVSYTSLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALID 433
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
AY NG EA +F G P+ + L A +++ K V+ +L + GI
Sbjct: 434 AYGSNGFLAEAVEIFRQMEQDGTKPNVVSVCTLLAACSRSKKKVNVETVLSAAQSRGINL 493
Query: 464 NKRFFLEALETF 475
N + A+ ++
Sbjct: 494 NTAAYNSAIGSY 505
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 162/362 (44%), Gaps = 50/362 (13%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRN--SGCRPDPSVYNALITAHLHTRDKAKALA 201
DT ++ +I + K GQ+ A+ +F+ MR+ + CRPD + +++ HL++
Sbjct: 282 DTTTFNIIIYCLSKLGQSSQALDVFNSMRDKRAECRPDVVTFTSIM--HLYSVRGEIENC 339
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+A+ F+ M E KPNIV+YN L+ A A + ++F ++ + + PD+ +Y +
Sbjct: 340 RAV--FEAMLA-EGLKPNIVSYNALMGAYAVHGMSENALSVFGDIKRNGIVPDVVSYTSL 396
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+++YG++ + + V M+ + KP+++T+N LID+YG + ++F+ +
Sbjct: 397 LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGT 456
Query: 322 KPTL-----------------------------------PTFNSMIINYGKARLQGKAEY 346
KP + +NS I +Y A KA
Sbjct: 457 KPNVVSVCTLLAACSRSKKKVNVETVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIA 516
Query: 347 VFQKMTAMKYTPSFITYECIIT----MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
++Q M K +T+ +I+ M Y + +S +E+ D L K++ S L
Sbjct: 517 LYQTMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLC--- 573
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
AY G TEA+ +F G PD Y + AY + +L ME NGI
Sbjct: 574 -AYSKQGQVTEAESIFNQMKMAGCKPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIE 632
Query: 463 PN 464
P+
Sbjct: 633 PD 634
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 128/285 (44%), Gaps = 7/285 (2%)
Query: 207 FQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
F+ MK + C N + YN+++R A+ VDQ LF E+ + PD TY+ +++A+
Sbjct: 130 FKWMKSQKNYCARNDI-YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAH 188
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
G+ G + +++ M P T+N LI++ G + + +V K + + P L
Sbjct: 189 GRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWRQALEVCKKMTDNGVGPDL 248
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T N ++ Y R KA F+ M K P T+ II S+A ++F+
Sbjct: 249 VTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDVFNS 308
Query: 386 LSKLGKDMK--VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ + + V T +++ Y + G +FE G+ P+ +Y L AY
Sbjct: 309 MRDKRAECRPDVVTFTSIMHLYSVRGEIENCRAVFEAMLAEGLKPNIVSYNALMGAYAVH 368
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAK 488
M E + +++NGIVP+ + L ++ S Q G AK
Sbjct: 369 GMSENALSVFGDIKRNGIVPDVVSYTSLLNSYGRS---RQPGKAK 410
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 124/283 (43%), Gaps = 5/283 (1%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ L+ G+ Q A +F MR +P+ YNALI A+
Sbjct: 382 KRNGIVPDVVSYTSLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAY----GS 437
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
LA+A+ F++M+ + KPN+V+ LL AC++++ V + + +
Sbjct: 438 NGFLAEAVEIFRQME-QDGTKPNVVSVCTLLAACSRSKKKVNVETVLSAAQSRGINLNTA 496
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
YN + +Y +++ ++ M+ + K D +TF +LI + + + K +
Sbjct: 497 AYNSAIGSYINAAELEKAIALYQTMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 556
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
T ++S++ Y K +AE +F +M P I Y ++ Y +
Sbjct: 557 EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCKPDVIAYTSMLHAYNASEKW 616
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
+A E+F E+ G + +A++ A+ G P+ +L +
Sbjct: 617 GKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMD 659
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 182/404 (45%), Gaps = 12/404 (2%)
Query: 65 RPRSKRGRKSEELESKELVRVLMR--SFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKS 122
R R + R ++ E+V L++ + D E L LN++V ++ LL E+ +
Sbjct: 83 RLRVEADRFQKDWSVSEVVERLLKLNHWDDVEGL---LNRWVGRFSRKNFPLLIREITQI 139
Query: 123 DKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSV 182
++VFRWM+ Q+ Y A IY+ +I + + A LF EM+ C+PD
Sbjct: 140 GSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAET 199
Query: 183 YNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL 242
YNALI AH +A A+ M P+ TYN L+ AC + N + +
Sbjct: 200 YNALINAH----GRAGQWRWAMNIMDDML-RAAIPPSRSTYNNLINACGSSGNWKEALNV 254
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
K++ E+ + PD+ T+N V+ AY + ++ S MK +PD T N++I K
Sbjct: 255 CKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVK 314
Query: 303 RQAFDKMEQVFKSLMHSKEK--PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
K +F S+ + + P + TF ++I Y + F M A P+
Sbjct: 315 LGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNI 374
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
++Y +I Y A +F+E+ K G V + ++L AY +G P +A +FE
Sbjct: 375 VSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFEL 434
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
P+ +Y L AY + ++L ME+NG+ PN
Sbjct: 435 MRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPN 478
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 165/372 (44%), Gaps = 20/372 (5%)
Query: 95 PLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYI-ADTGIYSKLIA 153
P TLN + +C + + GK+ +++F M+++R D ++ +I
Sbjct: 300 PDTTTLNIVI------YCLVKLGQNGKA------IDIFNSMKEKRSECYPDVVTFTTIIH 347
Query: 154 VMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL-HTRDKAKALAKALGYFQKMKG 212
+ GQ F+ M G +P+ YNALI A+ H DK +A F ++K
Sbjct: 348 LYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDK-----EAFSVFNEIKK 402
Query: 213 MERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIK 272
P++V+Y LL A ++ ++ +F+ + + P++ +YN ++DAYG G++
Sbjct: 403 -NGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLT 461
Query: 273 EMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
E +L M+ N +P+I++ L+ + G+ K++ V + K +NS I
Sbjct: 462 EAVEILHEMERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAI 521
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKD 392
+Y KA +++ M K P +TY +I+ A DE+ L
Sbjct: 522 GSYLSVGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIP 581
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
+ ++++ AY G TEA+ +F +G PD TY + AY A E L
Sbjct: 582 LSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASAL 641
Query: 453 LKRMEQNGIVPN 464
ME + + P+
Sbjct: 642 FLEMETDDVQPD 653
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 146/329 (44%), Gaps = 5/329 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI G + A +F+E++ +G PD Y +L+ A+ K+ KA+ F
Sbjct: 377 YNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAY----GKSGKPEKAMKVF 432
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ M+ CKPN+V+YN L+ A + + + E+ + + P+I + ++ A G+
Sbjct: 433 ELMR-RNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICTLLAACGR 491
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G +++SVLS + K + +N I SY +DK +++++ K KP T
Sbjct: 492 CGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDPVT 551
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N +I K G+A +M +K S Y +I Y V+ A +F ++
Sbjct: 552 YNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMK 611
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+G V T AM+ AY + +A LF V PDS L +A+ K
Sbjct: 612 MVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPA 671
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFS 476
V L + M + I N F E + S
Sbjct: 672 KVLVLAEFMREKKIPFNNSSFFEMVSACS 700
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 136/317 (42%), Gaps = 39/317 (12%)
Query: 199 ALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+L ++ F+ MK + C N + YN+++R A+ VDQ LF E+ + PD T
Sbjct: 141 SLEHSVQVFRWMKNQKNYCARNDI-YNMMIRLHARHNIVDQARGLFFEMQKWRCKPDAET 199
Query: 258 YNGVMDAYGK-----------------------------------NGMIKEMESVLSRMK 282
YN +++A+G+ +G KE +V +M
Sbjct: 200 YNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMT 259
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
N PD++T N+++ +Y + + K+ F+ + + +P T N +I K G
Sbjct: 260 ENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNG 319
Query: 343 KAEYVFQKMTAMKYT--PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
KA +F M + P +T+ II +Y C + + F+ + G + + NA
Sbjct: 320 KAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNA 379
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
++ AY +G+ EA +F G PD +Y L AY K+ E K+ + M +N
Sbjct: 380 LIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNH 439
Query: 461 IVPNKRFFLEALETFSS 477
PN + ++ + S
Sbjct: 440 CKPNLVSYNALIDAYGS 456
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 169/396 (42%), Gaps = 28/396 (7%)
Query: 102 KYVKVVRSEHC-------FLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAV 154
K +++R HC L + G + +E+ M++ I + L+A
Sbjct: 430 KVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICT-LLAA 488
Query: 155 MGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME 214
G+ GQ + S G + + + YN+ I ++L + KAL+ ++ M+ +
Sbjct: 489 CGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALS----LYRAMR-TK 543
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
+ KP+ VTYN+L+ C + + E+ + + Y+ V+ AY K G + E
Sbjct: 544 KVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEA 603
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
ES+ ++MK C+PD+IT+ +I +Y + ++K +F + +P +S++
Sbjct: 604 ESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRA 663
Query: 335 YGKARLQGK----AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
+ K K AE++ +K + F M C + REI + +
Sbjct: 664 FNKGGQPAKVLVLAEFMREKKIPFNNSSFF-------EMVSACSLLREWREIIGLIKLME 716
Query: 391 KDMKVST---LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ V + LN +L +G LF G + TY +L K A
Sbjct: 717 PSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEINFYTYSILLKNLLAAGNWR 776
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQ 483
++L+ ME+ G+ P+ + ++ +F+ + +G++
Sbjct: 777 KYIEVLQWMEEAGLQPSVGMY-RSISSFAQNRSGAE 811
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 103/243 (42%), Gaps = 41/243 (16%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+YS +I K+GQ A +F++M+ GCRPD Y A+I H D A+ KA
Sbjct: 586 VYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMI----HAYDVAENWEKASAL 641
Query: 207 FQKMKGMERCKPNIVTYNILLRA-----------------------------------CA 231
F +M+ + +P+ + + L+RA C+
Sbjct: 642 FLEME-TDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACS 700
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
R ++ L K + SI I N ++ GK+G I+ M + ++ ++ + +
Sbjct: 701 LLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEINFY 760
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
T+++L+ + + K +V + + + +P++ + S I ++ + R + V Q+
Sbjct: 761 TYSILLKNLLAAGNWRKYIEVLQWMEEAGLQPSVGMYRS-ISSFAQNRSGAEYAAVIQER 819
Query: 352 TAM 354
M
Sbjct: 820 IGM 822
>gi|297737369|emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 189/405 (46%), Gaps = 45/405 (11%)
Query: 101 NKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQ 160
++ V++ ++ CF++ + +G+S W + LEV+ W+ + WY + + + +++V+GK Q
Sbjct: 121 DRKVQMTPTDFCFVV-KWVGQS-SWQRALEVYEWLNLRHWYSPNARMLATILSVLGKANQ 178
Query: 161 TRLAMWLFSE----------------------------------MRNSGCRPDPSVYNAL 186
LA+ +F+ MR+ GC PD +N L
Sbjct: 179 EALAVEIFARAEAASGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTL 238
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I A L + LA L + G++ P+I+TYN L+ AC++ N+++ ++ ++
Sbjct: 239 INARLKSGTMVTNLAIELLNEVRRSGIQ---PDIITYNTLISACSRESNLEEAVKVYNDM 295
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
PD++TYN ++ YG+ GM +E + ++S PD +T+N L+ ++ +
Sbjct: 296 VAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNV 355
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY---TPSFITY 363
DK++++ + ++ T+N++I YGK +G+ + FQ + MK +P +TY
Sbjct: 356 DKVKEICEDMVKMGFGKDEMTYNTIIHMYGK---RGQHDLAFQLYSDMKLSGRSPDAVTY 412
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+I G + + A E+ E+ + T +A++ Y G EA+ F+
Sbjct: 413 TVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLR 472
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G+ PD Y ++ + N KL + M + P+ +
Sbjct: 473 SGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALY 517
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 151/348 (43%), Gaps = 36/348 (10%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH--TRDKAKALA 201
D Y+ +I+V G+ G +R A LF ++ + G PD YN+L+ A DK K +
Sbjct: 303 DLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEIC 362
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+ M M K + TYN ++ + D L+ ++ S +PD TY +
Sbjct: 363 ------EDMVKMGFGKDEM-TYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVL 415
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+D+ GK MIKE V+S M + + KP + TF+ LI Y K + E+ F ++ S
Sbjct: 416 IDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGI 475
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
KP ++ M+ + GKA ++Q+M + P YE ++ + G + +
Sbjct: 476 KPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHK 535
Query: 382 IFDELSKL-GKDMKVSTLNAMLEAYCMN-------------------------GLPTEAD 415
+ ++ +L G + +V + +++ C + GL +
Sbjct: 536 VVKDMEELCGMNSQV-ICSILVKGECFDHAANMLRLAISQGCELDQYGKARDFGLFCGTE 594
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
LFE + D S Y ++ K + + +KLL M++ G+ P
Sbjct: 595 ELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEP 642
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 150/356 (42%), Gaps = 42/356 (11%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ +I + GK+GQ LA L+S+M+ SG PD Y LI + KA + +A
Sbjct: 373 DEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLI----DSLGKANMIKEA 428
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+M R KP + T++ L+ A+A + F + S + PD Y+ ++D
Sbjct: 429 AEVMSEMLN-ARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLD 487
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ + + M + KPD + +++ GK + + +V K +
Sbjct: 488 ILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDM------E 541
Query: 324 TLPTFNSMII----------------------------NYGKARLQG---KAEYVFQKMT 352
L NS +I YGKAR G E +F+ +
Sbjct: 542 ELCGMNSQVICSILVKGECFDHAANMLRLAISQGCELDQYGKARDFGLFCGTEELFEGLL 601
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ + Y ++ M+ N S+A ++ + + G + ++T++ ++ +Y +G P
Sbjct: 602 SKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPE 661
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
EA+ + +N G+ + Y + AY K + + L M+++G+ P+ R +
Sbjct: 662 EAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIW 717
>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
Length = 577
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 161/317 (50%), Gaps = 3/317 (0%)
Query: 152 IAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK 211
+ V + G+ A L MR+ PD +N LI A + A +A L + +
Sbjct: 1 MGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQA 60
Query: 212 GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMI 271
G+ +P+ +TYN L+ AC+Q N+D A+F+E+ S PD++TYN ++ +G+ G
Sbjct: 61 GL---RPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKA 117
Query: 272 KEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM 331
+E E + + +PD +T+N L+ ++ K +++E+V + L+ + + T+N+M
Sbjct: 118 QEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTM 177
Query: 332 IINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGK 391
I YGK A ++ +M A+ TP +TY ++ G D +S A ++ +E++ G
Sbjct: 178 IHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGL 237
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
+ T +A++ AY +G +A+ F+ GV PD Y ++ + +++ +
Sbjct: 238 KPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMV 297
Query: 452 LLKRMEQNGIVPNKRFF 468
L + M ++G P+ +
Sbjct: 298 LYRAMIKDGYKPDDGLY 314
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 147/340 (43%), Gaps = 11/340 (3%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG--QTRLAMWLFSEMRNSGCR 177
G+ D Q L+ R + D ++ LI K G +A+ L E+R +G R
Sbjct: 8 GRFDDARQLLDAMRDQDIE----PDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLR 63
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
PD YN LI+A + L A+ F++M E C+P++ TYN ++ +
Sbjct: 64 PDAITYNTLISAC----SQGSNLDDAVAVFEEMIASE-CRPDLWTYNAMVSVHGRCGKAQ 118
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ +FKEL E PD TYN ++ A+ K G ++ +E V + + D IT+N +I
Sbjct: 119 EAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMI 178
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
YGK D ++ + P T+ ++ + GK +A V ++M
Sbjct: 179 HMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLK 238
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P+ +T+ +I Y A FD + + G ML+ + + + +L
Sbjct: 239 PTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVL 298
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
+ G PD Y++L A K N + ++ +++ ME
Sbjct: 299 YRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDME 338
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 134/264 (50%), Gaps = 2/264 (0%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNAL--FKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
+P++V++N L+ A A++ + AL E+ ++ L PD TYN ++ A + + +
Sbjct: 26 EPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDA 85
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
+V M +++C+PD+ T+N ++ +G+ + E +FK L+ +P T+NS++
Sbjct: 86 VAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYA 145
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
+ K + E V +++ + ITY +I MYG + A ++DE+ +G
Sbjct: 146 FAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPD 205
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
T ++++ +EA + E + G+ P T+ L AY K+ ++ ++
Sbjct: 206 AVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFD 265
Query: 455 RMEQNGIVPNKRFFLEALETFSSS 478
RM ++G+ P++ +L L+ F+ S
Sbjct: 266 RMVESGVKPDRLAYLVMLDVFARS 289
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 107/235 (45%), Gaps = 11/235 (4%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
++ + D Y+ L+ K+G + E+ +G R D YN +I H K
Sbjct: 129 EKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMI----HMYGKM 184
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
L ALG + +M+ + C P+ VTY +L+ + + + + + +E+ ++ L P + T
Sbjct: 185 GRLDLALGLYDEMRAIG-CTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVT 243
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
++ ++ AY K+G + E RM + KPD + + +++D + + K+ ++++++
Sbjct: 244 FSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMI 303
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA------MKYTPSFITYECI 366
KP + ++ K + E V Q M A + + I ECI
Sbjct: 304 KDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILIKAECI 358
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 155/349 (44%), Gaps = 36/349 (10%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH------------L 191
D YS LIA + K G+ A LF +MR + C PD + AL+ L
Sbjct: 181 DVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 240
Query: 192 HTRDKAKALAKALGY-------------------FQKM--KGMERCKPNIVTYNILLRAC 230
T + + Y F++M +G+E PN+VTYN L+
Sbjct: 241 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIE---PNVVTYNSLIHGF 297
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
VD L +E+ + PDI TYN ++D K G E + MK+ C PD+
Sbjct: 298 CMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDV 357
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
IT++ LI + K + D +F ++ P + TF++++ Y A L AE + ++
Sbjct: 358 ITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEE 417
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M A +P TY ++ + + AR + ++K G V T A+++A+C G
Sbjct: 418 MVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGK 477
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
PT A L E GV P+ TY+ L + E +K+L+R+E++
Sbjct: 478 PTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERD 526
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 158/342 (46%), Gaps = 5/342 (1%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
++R D Y L+A + K G+ +A+ +F + N C PD Y+ LI K
Sbjct: 139 RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLC----K 194
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
L +A F+KM+ C+P++VT+ L+ + + + + + + + P++
Sbjct: 195 TGRLDEACKLFEKMR-ENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVI 253
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TY+ ++D K G +++ + V RM +P+++T+N LI + D + + +
Sbjct: 254 TYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEM 313
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+ P + T+N++I K +A +F M A P ITY C+I + + +
Sbjct: 314 TATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERI 373
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
AR +FD++ K V T + ++E YC GL +A+ L E +PD TY L
Sbjct: 374 DMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSL 433
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ K +++LKRM + G PN + ++ F +
Sbjct: 434 VDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRA 475
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 174/400 (43%), Gaps = 37/400 (9%)
Query: 100 LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG 159
+N + KV + +LL +E+ K+ + YS +I ++
Sbjct: 49 INGFCKVHKVHRAYLLLKEM-----------------KESGLAPNVVTYSTVIHGFCRQT 91
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT--RDKAKALAKALGYFQKMKGMERCK 217
+ A LF +M +GC P+ YN L++ D+A L + + +G++
Sbjct: 92 KVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEM----RERGLQ--- 144
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+ +Y+ L+ + +D +F++ PD+ Y+ ++ K G + E +
Sbjct: 145 PDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKL 204
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
+M+ N C+PD++TF L+D K + +QV +++ P + T++S+I K
Sbjct: 205 FEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCK 264
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKV 395
A+ VF++M P+ +TY +I +G+C + V A + +E++ G +
Sbjct: 265 TGQVRDAQEVFKRMIVRGIEPNVVTYNSLI--HGFCMTNGVDSALLLMEEMTATGCLPDI 322
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
T N +++ C G EA+ LF + PD TY L + K ++ + L
Sbjct: 323 ITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDD 382
Query: 456 MEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTRSL 495
M + ++P+ + TFS+ + G + D R L
Sbjct: 383 MLKQAVLPD-------VVTFSTLVEGYCNAGLVDDAERLL 415
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 119/269 (44%), Gaps = 1/269 (0%)
Query: 196 KAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
KA L +A YF KMK + PN TYN+L+ + V + L KE+ ES LAP++
Sbjct: 19 KANRLPEATTYFAKMK-KKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNV 77
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
TY+ V+ + + + + +M N C P+++T+N L+ + D+ ++
Sbjct: 78 VTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDE 137
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
+ +P ++++++ K A VF+ + P + Y +I
Sbjct: 138 MRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGR 197
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+ A ++F+++ + + V T A+++ C EA + E + TP+ TY
Sbjct: 198 LDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSS 257
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L K Q++ KRM GI PN
Sbjct: 258 LIDGLCKTGQVRDAQEVFKRMIVRGIEPN 286
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 114/251 (45%), Gaps = 4/251 (1%)
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
C+ N++T+ I++ +A + + F ++ + P+ +TYN +++ + K +
Sbjct: 3 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
+L MK + P+++T++ +I + ++ D ++F+ ++ + P L T+N+++
Sbjct: 63 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDM 393
+ L +A + +M P +Y+ + M G C + A ++F++ S
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTL--MAGLCKTGKIDMALKVFEDNSNGDCPP 180
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
V + ++ C G EA LFE PD T+ L K + + Q++L
Sbjct: 181 DVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 240
Query: 454 KRMEQNGIVPN 464
+ ME PN
Sbjct: 241 ETMEDRNCTPN 251
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 113/258 (43%), Gaps = 8/258 (3%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
+F M KQ + D +S L+ G A L EM S C PD Y +L+
Sbjct: 379 LFDDMLKQ-AVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGF 437
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
K + +A ++M C+PN+VTY L+ A +A L +E+ +
Sbjct: 438 C----KVGRMVEARRVLKRM-AKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNG 492
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ-CKPDIITFNLLIDSYGKRQAFDKM 309
+ P++ TY ++ + G ++E +L R++ ++ CK D+ + +++D +
Sbjct: 493 VQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAA 552
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT-AMKYTPSFITYECIIT 368
++ +++ S P + ++I + + GKA V ++MT + K P+ YE +I
Sbjct: 553 LELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQ 612
Query: 369 MYGYCDNVSRAREIFDEL 386
A + DEL
Sbjct: 613 ELAREGRHEEANALADEL 630
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 11/184 (5%)
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP---TFNSMIINYGKARLQ 341
+C+ ++IT+ ++ID K + F + K+K T+P T+N +I + K
Sbjct: 2 ECEKNVITWTIMIDGLCKANRLPEATTYFAKM---KKKGTVPNEWTYNVLINGFCKVHKV 58
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLN 399
+A + ++M P+ +TY +I +G+C V A ++F ++ + G + T N
Sbjct: 59 HRAYLLLKEMKESGLAPNVVTYSTVI--HGFCRQTKVDTAYKLFRQMVENGCMPNLVTYN 116
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
+L C NGL EA L + G+ PD +Y L K ++ K+ + N
Sbjct: 117 TLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFED-NSN 175
Query: 460 GIVP 463
G P
Sbjct: 176 GDCP 179
>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
gi|224029903|gb|ACN34027.1| unknown [Zea mays]
gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
Length = 819
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 179/405 (44%), Gaps = 12/405 (2%)
Query: 65 RPRSKRGRKSEELESKELV-RVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSD 123
R R + R + + E+V R+L +D + + LN + + LL E+ S
Sbjct: 72 RLRVEGNRWQRDWKVSEVVARLLALPHADADAVDAVLNCWAGRFARRNFPLLIREIAISG 131
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+ VFRWM+ Q Y A IY +I + + + A LF EM+ C+P+ Y
Sbjct: 132 SLKHAVHVFRWMKNQENYCARNDIYGMMIRLHARHNKVDQARGLFFEMQEWRCKPNTDTY 191
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCK--PNIVTYNILLRACAQARNVDQVNA 241
N+LI AH A+ M M+R P+ TYN ++ AC A N +
Sbjct: 192 NSLIHAHARAGQWCWAI-------NIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALE 244
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
L K++ E+ + PD+ T+N V+ A+ + + MKS++ PD T N++I
Sbjct: 245 LCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLV 304
Query: 302 KRQAFDKMEQVFKSLMHSKE--KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
K + + ++F S+ + P + T+ S++ +Y + VF M A P+
Sbjct: 305 KIGLYGEAIELFNSMRERRTTCHPDVVTYTSIMYSYSVCGQAENCKAVFDIMVAEGVRPN 364
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
++Y ++ Y + A E F L + G + + ++L AY + P +A +F
Sbjct: 365 IVSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFN 424
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
P+ +Y L AY A M + LL MEQ+GI P+
Sbjct: 425 EMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPD 469
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 147/329 (44%), Gaps = 16/329 (4%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
G + W + LE+ + M + D ++ +++ Q A+ F M++S PD
Sbjct: 234 GAAGNWKKALELCKKMTENG-VGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPD 292
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER---CKPNIVTYNILL---RACAQA 233
N +I H K +A+ F M+ ER C P++VTY ++ C QA
Sbjct: 293 TCTMNIVI----HCLVKIGLYGEAIELFNSMR--ERRTTCHPDVVTYTSIMYSYSVCGQA 346
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
N A+F + + P+I +YN ++ AY +GM E +K N +PDI+++
Sbjct: 347 EN---CKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSY 403
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
L+++YG+ +K +VF + + KP ++N++I YG A + +A + +M
Sbjct: 404 TSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQ 463
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P I+ ++T G C +++ I G + N+ + +Y G +
Sbjct: 464 DGIQPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKK 523
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
A +L+ + V PD+ TY +L K
Sbjct: 524 ALVLYTSMRAGNVKPDAVTYNILISGSCK 552
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 153/360 (42%), Gaps = 46/360 (12%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRN--SGCRPDPSVYNALITAH--LHTRDKAKA 199
DT + +I + K G A+ LF+ MR + C PD Y +++ ++ + KA
Sbjct: 292 DTCTMNIVIHCLVKIGLYGEAIELFNSMRERRTTCHPDVVTYTSIMYSYSVCGQAENCKA 351
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
+ F M E +PNIV+YN LL A A + FK L ++ L PDI +Y
Sbjct: 352 V------FDIMVA-EGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYT 404
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
+++AYG++ ++ V + M+ N CKP+ +++N LID+YG + + +
Sbjct: 405 SLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQD 464
Query: 320 KEKPTLPTFNSMIINYGK-------------ARLQG----------------------KA 344
+P + + ++++ G+ A+ +G KA
Sbjct: 465 GIQPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKA 524
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
++ M A P +TY +I+ + + F+++ L + ++++ +
Sbjct: 525 LVLYTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTKEVYSSVICS 584
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y G TEA F + G PD TY L KAY+ L K ME NG P+
Sbjct: 585 YVKQGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKEMENNGTQPD 644
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 150/329 (45%), Gaps = 9/329 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ G A+ F ++ +G RPD Y +L+ A+ ++ KA F
Sbjct: 368 YNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAY----GRSAQPEKAREVF 423
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M+ CKPN V+YN L+ A A + + +L E+ + + PD+ + + ++ A G+
Sbjct: 424 NEMRK-NACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTACGR 482
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ +++ +L+ KS + + + +N I SY + K ++ S+ KP T
Sbjct: 483 CKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVLYTSMRAGNVKPDAVT 542
Query: 328 FNSMIINYGKARLQGKAEYV--FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
+N +I G +L E + F+ M + + Y +I Y ++ A F+
Sbjct: 543 YNILI--SGSCKLGRYVESLKFFEDMLDLNIHLTKEVYSSVICSYVKQGKLTEAASTFNS 600
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ + G V T +++AY +G A LF+ N G PD+ L +A K
Sbjct: 601 MKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKEMENNGTQPDAIVCSSLMEALNKGGQ 660
Query: 446 KELVQKLLKRMEQNGIVPNKRFFLEALET 474
E V +L++ M+Q I N++ + E + +
Sbjct: 661 PERVLQLIEFMKQKKIQLNQKAYFEIISS 689
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 134/293 (45%), Gaps = 6/293 (2%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ LE F+ + KQ D Y+ L+ G+ Q A +F+EMR + C+P+ YNAL
Sbjct: 383 EALETFK-LLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNAL 441
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I A+ A L +A+ +M+ + +P++++ + LL AC + + + +++ +
Sbjct: 442 IDAY----GSAGMLKEAISLLHEME-QDGIQPDVISISTLLTACGRCKQLTKIDIILAAA 496
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
+ + YN + +Y G K+ + + M++ KPD +T+N+LI K +
Sbjct: 497 KSRGIQLNTVAYNSGIGSYLSLGDYKKALVLYTSMRAGNVKPDAVTYNILISGSCKLGRY 556
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ + F+ ++ T ++S+I +Y K +A F M P +TY +
Sbjct: 557 VESLKFFEDMLDLNIHLTKEVYSSVICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTTL 616
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
I Y + RA ++F E+ G ++++EA G P L E
Sbjct: 617 IKAYSDDGSWRRAWDLFKEMENNGTQPDAIVCSSLMEALNKGGQPERVLQLIE 669
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/276 (19%), Positives = 115/276 (41%), Gaps = 5/276 (1%)
Query: 159 GQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKP 218
G + A+ L++ MR +PD YN LI+ K ++L +F+ M +
Sbjct: 519 GDYKKALVLYTSMRAGNVKPDAVTYNILISGSC----KLGRYVESLKFFEDMLDLNIHLT 574
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
V +++ Q + + + + F + E+ PD+ TY ++ AY +G + +
Sbjct: 575 KEVYSSVICSYVKQGK-LTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLF 633
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
M++N +PD I + L+++ K +++ Q+ + + K + + +I +
Sbjct: 634 KEMENNGTQPDAIVCSSLMEALNKGGQPERVLQLIEFMKQKKIQLNQKAYFEIISSCTML 693
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
R A + + + + + SF T I+ G C ++F ++ + +ST
Sbjct: 694 RDWKTASQIIEHLDSSLSSISFGTLNHILNFLGKCGRTESMMKLFYKMVTSCSTVGLSTY 753
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
+L + G + + + + GV P Y+
Sbjct: 754 TILLRNLLIVGKWRKYVEVLQWMEDAGVCPTLYMYQ 789
>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 189/405 (46%), Gaps = 45/405 (11%)
Query: 101 NKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQ 160
++ V++ ++ CF++ + +G+S W + LEV+ W+ + WY + + + +++V+GK Q
Sbjct: 178 DRKVQMTPTDFCFVV-KWVGQS-SWQRALEVYEWLNLRHWYSPNARMLATILSVLGKANQ 235
Query: 161 TRLAMWLFSE----------------------------------MRNSGCRPDPSVYNAL 186
LA+ +F+ MR+ GC PD +N L
Sbjct: 236 EALAVEIFARAEAAXGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTL 295
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I A L + LA L + G++ P+I+TYN L+ AC++ N+++ ++ ++
Sbjct: 296 INARLKSGTMVTNLAIELLNEVRRSGIQ---PDIITYNTLISACSRESNLEEAVKVYNDM 352
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
PD++TYN ++ YG+ GM +E + ++S PD +T+N L+ ++ +
Sbjct: 353 VAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNV 412
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY---TPSFITY 363
DK++++ + ++ T+N++I YGK +G+ + FQ + MK +P +TY
Sbjct: 413 DKVKEICEDMVKMGFGKDEMTYNTIIHMYGK---RGQHDLAFQLYSDMKLSGRSPDAVTY 469
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+I G + + A E+ E+ + T +A++ Y G EA+ F+
Sbjct: 470 TVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCMLR 529
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G+ PD Y ++ + N KL + M + P+ +
Sbjct: 530 SGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALY 574
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 162/349 (46%), Gaps = 10/349 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ E GK W Q E +Q+ + D +++ LI G A +F+ M
Sbjct: 785 VIEAYGKLKLW-QKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRD 843
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P N L+ A L + L + Q M G + K +I ++L A A A
Sbjct: 844 GPSPTVDSVNGLMQA-LIVDGRLDELYVVIQELQDM-GFKISKSSI---TLMLDAFAHAG 898
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
N+ +V +++ + + P ++ Y ++ K ++++E+++S M+ KPD+ +N
Sbjct: 899 NIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWN 958
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++ Y F K QV++ + + KP T+N++I+ Y + R + + +M +
Sbjct: 959 SVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRV 1018
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV--STLNAMLEAYCMNGLPT 412
P TY+ +I+ +G V +A E+F+ L L K+ K+ S + M++ + +G +
Sbjct: 1019 GLEPKLDTYKSLISAFGKLQMVEQAEELFEGL--LSKECKLDRSFYHIMMKMFRNSGNHS 1076
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+A+ L GV P +T LL +Y+ + E +K+L ++ G+
Sbjct: 1077 KAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGL 1125
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 119/253 (47%), Gaps = 16/253 (6%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH--TRDKAKALA 201
D Y+ +I+V G+ G +R A LF ++ + G PD YN+L+ A DK K +
Sbjct: 360 DLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEIC 419
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+ M M K + TYN ++ + D L+ ++ S +PD TY +
Sbjct: 420 ------EDMVKMGFGKDEM-TYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVL 472
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+D+ GK MIKE V+S M + KP + TF+ LI Y K + E+ F ++ S
Sbjct: 473 IDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGI 532
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
KP ++ M+ + GKA ++Q+M + P YE ++ + G RE
Sbjct: 533 KPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLG-----KENRE 587
Query: 382 IFDELSKLGKDMK 394
+++ K+ KDM+
Sbjct: 588 --EDVHKVVKDME 598
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/345 (20%), Positives = 149/345 (43%), Gaps = 12/345 (3%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR-PDPSVYNALITAH--LHTRDKAKALAKA 203
+Y ++ K G A +L + G D S++ +I A+ L KA++L +
Sbjct: 745 LYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGS 804
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L QK ++R +N L+ A A + ++ A+F + +P + + NG+M
Sbjct: 805 LR--QKCTMVDR-----KVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQ 857
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
A +G + E+ V+ ++ K + L++D++ +++++++ + + P
Sbjct: 858 ALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFP 917
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T+ + MI K + E + +M + P + ++ +Y + + +++
Sbjct: 918 TMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVY 977
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ + G T N ++ YC + P E L +G+ P TYK L A+ K
Sbjct: 978 QLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKL 1037
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAK 488
M E ++L + + ++ F+ ++ F +S G+ S + K
Sbjct: 1038 QMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNS--GNHSKAEK 1080
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 116/252 (46%), Gaps = 35/252 (13%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
KP++ +N +L+ + + +++ + E+ L PD TYN ++ Y ++ +E S
Sbjct: 951 KPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLS 1010
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
++ M+ +P + T+ LI ++GK Q ++ E++F+ L+ SKE
Sbjct: 1011 LMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLL-SKE--------------- 1054
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
K SF Y ++ M+ N S+A ++ + + G + ++
Sbjct: 1055 -----------------CKLDRSF--YHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIA 1095
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
T++ ++ +Y +G P EA+ + +N G+ + Y + AY K + + L M
Sbjct: 1096 TMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEM 1155
Query: 457 EQNGIVPNKRFF 468
+++G+ P+ R +
Sbjct: 1156 KKDGLEPDHRIW 1167
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/399 (20%), Positives = 155/399 (38%), Gaps = 65/399 (16%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT----AHLHTRDKAKA 199
D Y+ +I + GK+GQ LA L+S+M+ SG PD Y LI A++ ++ A+
Sbjct: 430 DEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANM-IKEAAEV 488
Query: 200 LAKAL----------------GYFQKMKGMER-----------CKPNIVTYNILLRACAQ 232
+++ L GY + K +E KP+ + Y+++L +
Sbjct: 489 MSEMLNAXVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLR 548
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG-------MIKEME---------- 275
+ L++E+ PD Y ++ GK ++K+ME
Sbjct: 549 FNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDMEELCGMNSQVI 608
Query: 276 -SVLSRMK-------------SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
S+L + + S C+ D ++ SYG + ++ L
Sbjct: 609 CSILVKGECFDHAANMLRLAISQGCELDRENLLSILGSYGSSGRHLEARELLDFLREHSS 668
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK-YTPSFITYECIITMYGYCDNVSRAR 380
++II KA G A + K + SF YE ++ + + A
Sbjct: 669 GSHQLINEALIIMLCKAHQLGDALREYGKARDFGLFCGSFTMYESLLLCCEENELFAEAS 728
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT-PDSSTYKLLYKA 439
+IF ++ G + +M+ YC G P A L + + G+ D S + + +A
Sbjct: 729 QIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHTGVIEA 788
Query: 440 YTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
Y K + + + L+ + Q + +++ + + +++S
Sbjct: 789 YGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAAS 827
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 5/159 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI + + + + L EMR G P Y +LI+A K + + +A
Sbjct: 988 DEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAF----GKLQMVEQA 1043
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F+ + E CK + Y+I+++ + N + L + E+ + P I T + +M
Sbjct: 1044 EELFEGLLSKE-CKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMV 1102
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
+Y +G +E E VL +K + ++ +ID+Y K
Sbjct: 1103 SYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLK 1141
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 168/373 (45%), Gaps = 12/373 (3%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ LGK + +F +Q+ + + D Y+ LI+ G+ R A+ +F +M
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSL-DVYSYTSLISAFANSGRYREAVNVFKKMEE 236
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
GC+P YN ++ K +KMK + P+ TYN L+ C +
Sbjct: 237 DGCKPTLITYNVILNVF---GKMGTPWNKITSLVEKMKS-DGIAPDAYTYNTLITCCKRG 292
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ +F+E+ + + D TYN ++D YGK+ KE VL+ M N P I+T+
Sbjct: 293 SLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTY 352
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N LI +Y + D+ ++ + KP + T+ +++ + +A A +F++M
Sbjct: 353 NSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN 412
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P+ T+ I MYG + +IFDE++ G + T N +L + NG+ +E
Sbjct: 413 AGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSE 472
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
+F+ G P+ T+ L AY++ E + +RM G+ P+ L
Sbjct: 473 VSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPD-------LS 525
Query: 474 TFSSSLAGSQSGS 486
T+++ LA G
Sbjct: 526 TYNTVLAALARGG 538
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 164/389 (42%), Gaps = 69/389 (17%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ L++ + G+ AM +F EMRN+GC+P+ +NA I + R K + K
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMY-GNRGKFTEMMKI 441
Query: 204 L--------------------------------GYFQKMKGMERCKPNIVTYNILLRACA 231
G F++MK P T+N L+ A +
Sbjct: 442 FDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV-PERETFNTLISAYS 500
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ + +Q +++ + ++ + PD+ TYN V+ A + GM ++ E VL+ M+ +CKP+ +
Sbjct: 501 RCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNEL 560
Query: 292 TFNLLIDSYGKRQAFDKM-----------------------------------EQVFKSL 316
T+ L+ +Y + M E+ F L
Sbjct: 561 TYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL 620
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
P + T NSM+ YG+ ++ KA V M +TPS TY ++ M+ +
Sbjct: 621 KERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADF 680
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
++ EI E+ G + + N ++ AYC N +A +F N G+ PD TY
Sbjct: 681 GKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTF 740
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+Y +M E +++ M ++G PN+
Sbjct: 741 IGSYAADSMFEEAIGVVRYMIKHGCRPNQ 769
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 154/329 (46%), Gaps = 6/329 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI + + A +F EM+ +G D YNAL+ + K+ +A
Sbjct: 278 DAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVY----GKSHRPKEA 333
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ +M + P+IVTYN L+ A A+ +D+ L ++ E PD++TY ++
Sbjct: 334 MKVLNEMV-LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ + G ++ S+ M++ CKP+I TFN I YG R F +M ++F + P
Sbjct: 393 GFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP 452
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T+N+++ +G+ + + VF++M + P T+ +I+ Y C + +A ++
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ G +ST N +L A G+ +++ + + P+ TY L AY
Sbjct: 513 RRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANG 572
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
L+ L + + +G++ + L+ L
Sbjct: 573 KEIGLMHSLAEEV-YSGVIEPRAVLLKTL 600
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 150/324 (46%), Gaps = 20/324 (6%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VF+ M K+ ++ + ++ LI+ + G AM ++ M ++G PD S YN ++ A
Sbjct: 476 VFKEM-KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAA- 533
Query: 191 LHTRDKAKALAKALGYFQKMKGME-----RCKPNIVTYNILLRACAQARNVDQVNALFKE 245
LA+ + Q K + RCKPN +TY LL A A + + +++L +E
Sbjct: 534 ---------LARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEE 584
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
++ ++ P ++ K ++ E E S +K PDI T N ++ YG+RQ
Sbjct: 585 VYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQM 644
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
K V + P++ T+NS++ + ++ GK+E + +++ A P I+Y
Sbjct: 645 VAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNT 704
Query: 366 IITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+I Y YC N + A IF E+ G V T N + +Y + + EA +
Sbjct: 705 VI--YAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK 762
Query: 424 MGVTPDSSTYKLLYKAYTKANMKE 447
G P+ +TY + Y K N K+
Sbjct: 763 HGCRPNQNTYNSIVDGYCKLNRKD 786
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 165/406 (40%), Gaps = 78/406 (19%)
Query: 109 SEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWY--IADTGIYSKLIAVMGKKGQTRLAMW 166
S + LG K+ L F W KQ+ Y + D + + +I+++GK+G+ A
Sbjct: 135 SSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAAN 194
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
+F+ ++ G D Y +LI+A ++
Sbjct: 195 MFNGLQEDGFSLDVYSYTSLISAFANS--------------------------------- 221
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMI-KEMESVLSRMKSNQ 285
R + VN +FK++ E P + TYN +++ +GK G ++ S++ +MKS+
Sbjct: 222 ------GRYREAVN-VFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDG 274
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
PD T+N LI + + QVF+ + + T+N+++ YGK+ +A
Sbjct: 275 IAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAM 334
Query: 346 YVFQKMTAMKYTPSFITYECIITMY---GYCDN--------------------------- 375
V +M ++PS +TY +I+ Y G D
Sbjct: 335 KVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF 394
Query: 376 -----VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
V A IF+E+ G + T NA ++ Y G TE +F+ + G++PD
Sbjct: 395 ERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDI 454
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
T+ L + + M V + K M++ G VP + F + +S
Sbjct: 455 VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYS 500
>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 189/405 (46%), Gaps = 45/405 (11%)
Query: 101 NKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQ 160
++ V++ ++ CF++ + +G+S W + LEV+ W+ + WY + + + +++V+GK Q
Sbjct: 146 DRKVQMTPTDFCFVV-KWVGQS-SWQRALEVYEWLNLRHWYSPNARMLATILSVLGKANQ 203
Query: 161 TRLAMWLFSE----------------------------------MRNSGCRPDPSVYNAL 186
LA+ +F+ MR+ GC PD +N L
Sbjct: 204 EALAVEIFARAEAASGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTL 263
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I A L + LA L + G++ P+I+TYN L+ AC++ N+++ ++ ++
Sbjct: 264 INARLKSGTMVTNLAIELLNEVRRSGIQ---PDIITYNTLISACSRESNLEEAVKVYNDM 320
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
PD++TYN ++ YG+ GM +E + ++S PD +T+N L+ ++ +
Sbjct: 321 VAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNV 380
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY---TPSFITY 363
DK++++ + ++ T+N++I YGK +G+ + FQ + MK +P +TY
Sbjct: 381 DKVKEICEDMVKMGFGKDEMTYNTIIHMYGK---RGQHDLAFQLYSDMKLSGRSPDAVTY 437
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+I G + + A E+ E+ + T +A++ Y G EA+ F+
Sbjct: 438 TVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLR 497
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G+ PD Y ++ + N KL + M + P+ +
Sbjct: 498 SGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALY 542
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 163/349 (46%), Gaps = 10/349 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ E GK W Q E +Q+ + D +++ LI G A +F+ M
Sbjct: 753 VIEAYGKLKLW-QKAESLVGSLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRD 811
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P N L+ A L + L + Q M G + K +I ++L A A A
Sbjct: 812 GPSPTVDSVNGLMQA-LIVDGRLDELYVVIQELQDM-GFKISKSSI---TLMLDAFAHAG 866
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
N+ +V +++ + + P ++ Y ++ K ++++E+++S M+ + KPD+ +N
Sbjct: 867 NIFEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWN 926
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++ Y F K QV++ + + KP T+N++I+ Y + R + + +M +
Sbjct: 927 SVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRV 986
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV--STLNAMLEAYCMNGLPT 412
P TY+ +I+ +G V +A E+F+ L L K+ K+ S + M++ + +G +
Sbjct: 987 GLEPKLDTYKSLISAFGKLQMVEQAEELFEGL--LSKECKLDRSFYHIMMKMFRNSGNHS 1044
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+A+ L GV P +T LL +Y+ + E +K+L ++ G+
Sbjct: 1045 KAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGL 1093
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 120/253 (47%), Gaps = 16/253 (6%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH--TRDKAKALA 201
D Y+ +I+V G+ G +R A LF ++ + G PD YN+L+ A DK K +
Sbjct: 328 DLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEIC 387
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+ M M K + TYN ++ + D L+ ++ S +PD TY +
Sbjct: 388 ------EDMVKMGFGKDEM-TYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVL 440
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+D+ GK MIKE V+S M + + KP + TF+ LI Y K + E+ F ++ S
Sbjct: 441 IDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGI 500
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
KP ++ M+ + GKA ++Q+M + P YE ++ + G RE
Sbjct: 501 KPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLG-----KENRE 555
Query: 382 IFDELSKLGKDMK 394
+++ K+ KDM+
Sbjct: 556 --EDVHKVVKDME 566
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/345 (20%), Positives = 150/345 (43%), Gaps = 12/345 (3%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR-PDPSVYNALITAH--LHTRDKAKALAKA 203
+Y ++ K G A +L + G D S++ +I A+ L KA++L +
Sbjct: 713 LYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGS 772
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L QK ++R +N L+ A A + ++ A+F + +P + + NG+M
Sbjct: 773 LR--QKCTMVDR-----KVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQ 825
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
A +G + E+ V+ ++ K + L++D++ +++++++ + + P
Sbjct: 826 ALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFP 885
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T+ + MI K + E + +M ++ P + ++ +Y + + +++
Sbjct: 886 TMHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVY 945
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ + G T N ++ YC + P E L +G+ P TYK L A+ K
Sbjct: 946 QLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKL 1005
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAK 488
M E ++L + + ++ F+ ++ F +S G+ S + K
Sbjct: 1006 QMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNS--GNHSKAEK 1048
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 135/302 (44%), Gaps = 40/302 (13%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
++ M+ +G P +Y +I K K + +M+ + R KP++ +N +
Sbjct: 874 IYQGMKAAGYFPTMHLYRIMIG----LLAKGKRVRDVEAMVSEME-VARFKPDLSIWNSV 928
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
L+ + + +++ + E+ L PD TYN ++ Y ++ +E S++ M+
Sbjct: 929 LKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGL 988
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
+P + T+ LI ++GK Q ++ E++F+ L+ SKE
Sbjct: 989 EPKLDTYKSLISAFGKLQMVEQAEELFEGLL-SKE------------------------- 1022
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
K SF Y ++ M+ N S+A ++ + + G + ++T++ ++ +Y
Sbjct: 1023 -------CKLDRSF--YHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYS 1073
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
+G P EA+ + +N G+ + Y + AY K + + L M+++G+ P+ R
Sbjct: 1074 GSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHR 1133
Query: 467 FF 468
+
Sbjct: 1134 IW 1135
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 80/399 (20%), Positives = 155/399 (38%), Gaps = 65/399 (16%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT----AHLHTRDKAKA 199
D Y+ +I + GK+GQ LA L+S+M+ SG PD Y LI A++ ++ A+
Sbjct: 398 DEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANM-IKEAAEV 456
Query: 200 LAKAL----------------GYFQKMKGMER-----------CKPNIVTYNILLRACAQ 232
+++ L GY + K +E KP+ + Y+++L +
Sbjct: 457 MSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLR 516
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG-------MIKEME---------- 275
+ L++E+ PD Y ++ GK ++K+ME
Sbjct: 517 FNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKDMEELCGMNSQVI 576
Query: 276 -SVLSRMK-------------SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
S+L + + S C+ D ++ SYG + ++ L
Sbjct: 577 CSILVKGECFDHAANMLRLAISQGCELDRENLLSILGSYGSSGRHLEARELLDFLREHSS 636
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK-YTPSFITYECIITMYGYCDNVSRAR 380
++II KA G A + K + SF YE ++ + + A
Sbjct: 637 GSHQLINEALIIMLCKAHQLGDALREYGKARDFGLFCGSFTMYESLLLCCEENELFAEAS 696
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT-PDSSTYKLLYKA 439
+IF ++ G + +M+ YC G P A L + + G+ D S + + +A
Sbjct: 697 QIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHTGVIEA 756
Query: 440 YTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
Y K + + + L+ + Q + +++ + + +++S
Sbjct: 757 YGKLKLWQKAESLVGSLRQKCTMVDRKVWNALIHAYAAS 795
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 166/368 (45%), Gaps = 12/368 (3%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
LGK + +F +Q+ + + D Y+ LI+ G+ R A+ +F +M GC+P
Sbjct: 183 LGKEGRVSSAANLFNGLQEDGFSL-DVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKP 241
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
YN ++ K +KMK + P+ TYN L+ C + +
Sbjct: 242 TLITYNVILNVF---GKMGTPWNKITSLVEKMKS-DGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+F+E+ + + D TYN ++D YGK+ KE VL+ M+ N P I+T+N LI
Sbjct: 298 AAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLIS 357
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
+Y + D+ ++ + KP + T+ +++ + +A A +F++M P
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKP 417
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+ T+ I MYG +IFDE++ G + T N +L + NG+ +E +F
Sbjct: 418 NICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ G P+ T+ L AY++ E + +RM G+ P+ L T+++
Sbjct: 478 KEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPD-------LSTYNTV 530
Query: 479 LAGSQSGS 486
LA G
Sbjct: 531 LAALARGG 538
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 165/389 (42%), Gaps = 69/389 (17%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ L++ + G+ AM +F EMRN+GC+P+ +NA I + R K + K
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMY-GNRGKFVDMMKI 441
Query: 204 L--------------------------------GYFQKMKGMERCKPNIVTYNILLRACA 231
G F++MK P T+N L+ A +
Sbjct: 442 FDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV-PERETFNTLISAYS 500
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ + +Q +++ + ++ + PD+ TYN V+ A + GM ++ E VL+ M+ +CKP+ +
Sbjct: 501 RCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNEL 560
Query: 292 TFNLLIDSYGKRQAFDKM-----------------------------------EQVFKSL 316
T+ L+ +Y + M E+ F L
Sbjct: 561 TYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL 620
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
P + T NSM+ YG+ ++ GKA V M +TPS TY ++ M+ +
Sbjct: 621 KERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADF 680
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
++ EI E+ G + + N ++ AYC N +A +F + G+ PD TY
Sbjct: 681 GKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTF 740
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+Y +M E +++ M ++G PN+
Sbjct: 741 IGSYAADSMFEEAIGVVRYMIKHGCRPNQ 769
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 154/329 (46%), Gaps = 6/329 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI + + A +F EM+ +G D YNAL+ + K+ +A
Sbjct: 278 DAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVY----GKSHRPKEA 333
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ +M+ + P+IVTYN L+ A A+ +D+ L ++ E PD++TY ++
Sbjct: 334 MKVLNEME-LNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ + G ++ ++ M++ CKP+I TFN I YG R F M ++F + P
Sbjct: 393 GFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSP 452
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T+N+++ +G+ + + VF++M + P T+ +I+ Y C + +A ++
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ G +ST N +L A G+ +++ + + P+ TY L AY
Sbjct: 513 RRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANG 572
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
L+ L + + +G++ + L+ L
Sbjct: 573 KEIGLMHSLAEEV-YSGVIEPRAVLLKTL 600
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 151/324 (46%), Gaps = 20/324 (6%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VF+ M K+ ++ + ++ LI+ + G AM ++ M ++G PD S YN ++ A
Sbjct: 476 VFKEM-KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAA- 533
Query: 191 LHTRDKAKALAKALGYFQKMKGME-----RCKPNIVTYNILLRACAQARNVDQVNALFKE 245
LA+ + Q K + RCKPN +TY LL A A + + +++L +E
Sbjct: 534 ---------LARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEE 584
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
++ ++ P ++ K ++ E E S +K PDI T N ++ YG+RQ
Sbjct: 585 VYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQM 644
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
K +V + P++ T+NS++ + ++ GK+E + +++ A P I+Y
Sbjct: 645 VGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNT 704
Query: 366 IITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+I Y YC N + A IF E+ G V T N + +Y + + EA +
Sbjct: 705 VI--YAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK 762
Query: 424 MGVTPDSSTYKLLYKAYTKANMKE 447
G P+ +TY + Y K N K+
Sbjct: 763 HGCRPNQNTYNSIVDGYCKLNRKD 786
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 164/406 (40%), Gaps = 78/406 (19%)
Query: 109 SEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWY--IADTGIYSKLIAVMGKKGQTRLAMW 166
S + LG K+ L F W KQ+ Y + D + + +I+++GK+G+ A
Sbjct: 135 SSELLAFLKGLGFHKKFDLALCAFDWFMKQKDYQSMLDNSVIAIVISMLGKEGRVSSAAN 194
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
LF+ ++ G D Y +LI+A ++
Sbjct: 195 LFNGLQEDGFSLDVYSYTSLISAFANS--------------------------------- 221
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMI-KEMESVLSRMKSNQ 285
R + VN +FK++ E P + TYN +++ +GK G ++ S++ +MKS+
Sbjct: 222 ------GRYREAVN-VFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDG 274
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
PD T+N LI + + QVF+ + + T+N+++ YGK+ +A
Sbjct: 275 IAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAM 334
Query: 346 YVFQKMTAMKYTPSFITYECIITMY---GYCDN--------------------------- 375
V +M ++PS +TY +I+ Y G D
Sbjct: 335 KVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF 394
Query: 376 -----VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
V A IF+E+ G + T NA ++ Y G + +F+ + G++PD
Sbjct: 395 ERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDI 454
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
T+ L + + M V + K M++ G VP + F + +S
Sbjct: 455 VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYS 500
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 173/402 (43%), Gaps = 75/402 (18%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ L++ K G+ AM +F EMR +GC+P+ +NALI H + + +
Sbjct: 395 DVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGN----FVEM 450
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH---------------- 247
+ F+++K E C P+IVT+N LL Q +V+ +FKE+
Sbjct: 451 MKVFEEIKICE-CVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLIS 509
Query: 248 -------------------ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
++ + PD+ TYN V+ A + G+ ++ E VL+ MK +CKP
Sbjct: 510 AYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKP 569
Query: 289 DIITFNLLIDSYGKRQAFDKM-----------------------------------EQVF 313
+ +T+ L+ +Y + ++M E+ F
Sbjct: 570 NELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAF 629
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
L P + T N+M+ YG+ R+ K + + +TPS TY ++ MY
Sbjct: 630 LELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRT 689
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
++ ++ +I E+ G + + N ++ AYC NG EA +F + G+ PD TY
Sbjct: 690 EHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITY 749
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+Y +M ++K M +NG PN+ + ++ F
Sbjct: 750 NTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWF 791
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 175/390 (44%), Gaps = 12/390 (3%)
Query: 96 LVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVM 155
VR + ++ + ++ LGK + + ++ +I D Y+ LI
Sbjct: 172 FVRNREDFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDGVHI-DIYAYTSLITAY 230
Query: 156 GKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER 215
G+ R A+ +F ++ GCRP YN ++ + +K G MK
Sbjct: 231 ASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVY---GKMGMPWSKIAGLVDSMKS-SG 286
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
P++ TYN L+ +C + ++ +F+E+ + +PD TYN ++D YGK+ +E
Sbjct: 287 VAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAM 346
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
VL M+++ P I+T+N LI +Y + D+ ++ ++ KP + T+ +++ +
Sbjct: 347 EVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGF 406
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
K A VF++M P+ T+ +I M+G N ++F+E+ +
Sbjct: 407 EKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDI 466
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
T N +L + NG+ +E +F+ G P+ T+ L AY++ + + +R
Sbjct: 467 VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRR 526
Query: 456 MEQNGIVPNKRFFLEALETFSSSLAGSQSG 485
M G+ P+ L T+++ LA G
Sbjct: 527 MLDAGVTPD-------LSTYNAVLAALARG 549
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 162/332 (48%), Gaps = 8/332 (2%)
Query: 148 YSKLIAVMGKKGQ--TRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALG 205
Y+ ++ V GK G +++A L M++SG PD YN LI++ + +A
Sbjct: 258 YNVILNVYGKMGMPWSKIA-GLVDSMKSSGVAPDLYTYNTLISSC----RRGSLYEEAAE 312
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
F++MK P+ VTYN LL ++R + + KE+ S AP I TYN ++ AY
Sbjct: 313 VFEEMKA-AGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAY 371
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
++G++ E + S+M KPD+ T+ L+ + K D +VF+ + + +P +
Sbjct: 372 ARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNI 431
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
TFN++I +G + VF+++ + P +T+ ++ ++G S +F E
Sbjct: 432 CTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKE 491
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ + G + T N ++ AY G +A ++ + GVTPD STY + A + +
Sbjct: 492 MKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGL 551
Query: 446 KELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
E +K+L M+ PN+ + L +++
Sbjct: 552 WEQSEKVLAEMKDGRCKPNELTYCSLLHAYAN 583
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 164/350 (46%), Gaps = 6/350 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + GKS + + +EV + M+ + Y+ LI+ + G AM L S+M
Sbjct: 332 LLDVYGKSRRPREAMEVLKEMEAS-GFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKK 390
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G +PD Y L++ +K A+ F++M+ + C+PNI T+N L++
Sbjct: 391 GIKPDVFTYTTLLSGF----EKTGKDDYAMKVFEEMR-VAGCQPNICTFNALIKMHGNRG 445
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
N ++ +F+E+ PDI T+N ++ +G+NGM E+ V MK P+ TFN
Sbjct: 446 NFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFN 505
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
LI +Y + FD+ +++ ++ + P L T+N+++ + L ++E V +M
Sbjct: 506 TLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDG 565
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ P+ +TY ++ Y V R + +E+ + + L ++ Y + L TE
Sbjct: 566 RCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTET 625
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ F G +PD +T + Y + M ++L ++ +G P+
Sbjct: 626 ERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPS 675
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 155/324 (47%), Gaps = 20/324 (6%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VF+ M K+ ++ + ++ LI+ + G AM ++ M ++G PD S YNA++ A
Sbjct: 488 VFKEM-KRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAA- 545
Query: 191 LHTRDKAKALAKALGYFQKMKGME-----RCKPNIVTYNILLRACAQARNVDQVNALFKE 245
LA+ + Q K + RCKPN +TY LL A A + V++++AL +E
Sbjct: 546 ---------LARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEE 596
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
++ I+ P ++ Y K+ ++ E E ++ PDI T N ++ YG+R+
Sbjct: 597 IYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRM 656
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
K ++ + S P+L T+NS++ Y + K+E + +++ A P I++
Sbjct: 657 VSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNT 716
Query: 366 IITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+I + YC N + A IF E+ G V T N + +Y + + EA + +
Sbjct: 717 VI--FAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIK 774
Query: 424 MGVTPDSSTYKLLYKAYTKANMKE 447
G P+ +TY L + K N ++
Sbjct: 775 NGCKPNQNTYNSLIDWFCKLNRRD 798
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 162/333 (48%), Gaps = 14/333 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI+ + A +F EM+ +G PD YNAL+ + +R +A+
Sbjct: 290 DLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAM--- 346
Query: 204 LGYFQKMKGMERC--KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+ +K ME P+IVTYN L+ A A+ +D+ L ++ + + PD++TY +
Sbjct: 347 ----EVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTL 402
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ + K G V M+ C+P+I TFN LI +G R F +M +VF+ + +
Sbjct: 403 LSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICEC 462
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P + T+N+++ +G+ + + VF++M + P T+ +I+ Y C +A
Sbjct: 463 VPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMA 522
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
I+ + G +ST NA+L A GL +++ + + P+ TY L AY
Sbjct: 523 IYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAY- 581
Query: 442 KANMKELVQKLLKRMEQ--NGIVPNKRFFLEAL 472
AN KE V+++ E+ +GI+ + L+ L
Sbjct: 582 -ANGKE-VERMSALAEEIYSGIIEPQAVLLKTL 612
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 176/360 (48%), Gaps = 22/360 (6%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQR-----WYIADTGIYSKLIAVMGKKGQTRLAMWLF 168
+ ELG S +W + ++ F WM Q+ W + S +I+ +G+ G++ A +F
Sbjct: 88 FIVRELGHSGQWEKVVKSFDWMVLQQNLRSQW----DKVTSTIISSLGRLGRSDWAQLIF 143
Query: 169 SEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLR 228
+G + VY++LI A+ ++ LAKA+ F+ MK + CKPN+V YN ++
Sbjct: 144 DRAVGAGFGNNVFVYSSLICAY----GRSGKLAKAVEIFEAMKVV--CKPNLVVYNAVID 197
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
AC++ + +F+E+ E ++PD T+N ++ A G+ +E + + + M+
Sbjct: 198 ACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIAR 257
Query: 289 DIITFNLLIDSY--GKRQAFDK--MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
D +T+N LI +Y G + ME + KS S +P++ T+++MI Y K L +A
Sbjct: 258 DDVTYNTLIATYCRGGQMHLGAALMETMAKS---SGIEPSVITYSTMIDGYAKLGLAHEA 314
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
+FQ+M P I Y ++ ++ N A I + + G + T NA+L++
Sbjct: 315 IALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDS 374
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y G EA L E G +P+ TY L AY K L + +++ G+ P+
Sbjct: 375 YGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPD 434
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 130/258 (50%), Gaps = 7/258 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM-RN 173
L G++++W +C +F M+ +R D Y+ LIA + GQ L L M ++
Sbjct: 230 LISAAGRANRWEECDRIFAEME-ERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKS 288
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
SG P Y+ +I + K +A+ FQ+M+ + +P+ + YN ++ A+
Sbjct: 289 SGIEPSVITYSTMIDGYA----KLGLAHEAIALFQEMRN-QNVEPDGICYNTMVDIHARL 343
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
N D+ +++ + + E+ A DI TYN ++D+YGK G +E S+L MK P+I+T+
Sbjct: 344 GNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTY 403
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+ LID+Y K +F+ + + +P + +++++ K +A + ++M
Sbjct: 404 SALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMAD 463
Query: 354 MKYTPSFITYECIITMYG 371
P+ ITY ++ YG
Sbjct: 464 NGIRPNVITYNSLLDAYG 481
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 84/190 (44%), Gaps = 5/190 (2%)
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL-MHSKEKPTLPTFNSMI 332
M ++L ++ ++ PD + F ++ G ++K+ + F + + + S I
Sbjct: 69 MPALLDQVSAHLLGPDDLPF--IVRELGHSGQWEKVVKSFDWMVLQQNLRSQWDKVTSTI 126
Query: 333 IN-YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGK 391
I+ G+ A+ +F + + + Y +I YG +++A EIF+ + + K
Sbjct: 127 ISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKVVCK 186
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
V NA+++A G A +F G++PD T+ L A +AN E +
Sbjct: 187 PNLV-VYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDR 245
Query: 452 LLKRMEQNGI 461
+ ME+ GI
Sbjct: 246 IFAEMEERGI 255
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 47/224 (20%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + GK K+ + + + M KQR + YS LI K G R AM LF +++ +
Sbjct: 371 LLDSYGKQGKFREAMSLLEEM-KQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKA 429
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL----RAC 230
G +PD +Y+ L+ K + +AL ++M +PN++TYN LL R C
Sbjct: 430 GLQPDVVLYSTLVDGCC----KNGSPDEALALLEEMAD-NGIRPNVITYNSLLDAYGRQC 484
Query: 231 AQARN----------------------------VD--QVNAL-------FKELHESILAP 253
R VD Q AL F+E+ ++ + P
Sbjct: 485 LMVRKTFPKLRFFLLPRVTMLLKPSMQDDQQSLVDPKQKQALVLAAARVFREMAKNGVKP 544
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
++ T++ +++A +++ ++L M+ + +T LL+
Sbjct: 545 NVVTFSSILNACSHCASVEDASNLLEAMRVFDGRVYGVTHGLLM 588
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 176/360 (48%), Gaps = 22/360 (6%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQR-----WYIADTGIYSKLIAVMGKKGQTRLAMWLF 168
+ ELG S +W + ++ F WM Q+ W + S +I+ +G+ G++ A +F
Sbjct: 89 FIVRELGHSGQWEKVVKSFDWMVLQQNLRSQW----DKVTSTIISSLGRLGRSDWAQLIF 144
Query: 169 SEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLR 228
+G + VY++LI A+ ++ LAKA+ F+ MK + CKPN+V YN ++
Sbjct: 145 DRAVGAGFGNNVFVYSSLICAY----GRSGKLAKAVEIFEAMKVV--CKPNLVVYNAVID 198
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
AC++ + +F+E+ E ++PD T+N ++ A G+ +E + + + M+
Sbjct: 199 ACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIAR 258
Query: 289 DIITFNLLIDSY--GKRQAFDK--MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
D +T+N LI +Y G + ME + KS S +P++ T+++MI Y K L +A
Sbjct: 259 DDVTYNTLIATYCRGGQMHLGAALMETMAKS---SGIEPSVITYSTMIDGYAKLGLAHEA 315
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
+FQ+M P I Y ++ ++ N A I + + G + T NA+L++
Sbjct: 316 IALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDS 375
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y G EA L E G +P+ TY L AY K L + +++ G+ P+
Sbjct: 376 YGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPD 435
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 130/258 (50%), Gaps = 7/258 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM-RN 173
L G++++W +C +F M+ +R D Y+ LIA + GQ L L M ++
Sbjct: 231 LISAAGRANRWEECDRIFAEME-ERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKS 289
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
SG P Y+ +I + K +A+ FQ+M+ + +P+ + YN ++ A+
Sbjct: 290 SGIEPSVITYSTMIDGYA----KLGLAHEAIALFQEMRN-QNVEPDGICYNTMVDIHARL 344
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
N D+ +++ + + E+ A DI TYN ++D+YGK G +E S+L MK P+I+T+
Sbjct: 345 GNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTY 404
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+ LID+Y K +F+ + + +P + +++++ K +A + ++M
Sbjct: 405 SALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMAD 464
Query: 354 MKYTPSFITYECIITMYG 371
P+ ITY ++ YG
Sbjct: 465 NGIRPNVITYNSLLDAYG 482
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 84/190 (44%), Gaps = 5/190 (2%)
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL-MHSKEKPTLPTFNSMI 332
M ++L ++ ++ PD + F ++ G ++K+ + F + + + S I
Sbjct: 70 MPALLDQVSAHLLGPDDLPF--IVRELGHSGQWEKVVKSFDWMVLQQNLRSQWDKVTSTI 127
Query: 333 IN-YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGK 391
I+ G+ A+ +F + + + Y +I YG +++A EIF+ + + K
Sbjct: 128 ISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKVVCK 187
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
V NA+++A G A +F G++PD T+ L A +AN E +
Sbjct: 188 PNLV-VYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDR 246
Query: 452 LLKRMEQNGI 461
+ ME+ GI
Sbjct: 247 IFAEMEERGI 256
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 47/224 (20%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + GK K+ + + + M KQR + YS LI K G R AM LF +++ +
Sbjct: 372 LLDSYGKQGKFREAMSLLEEM-KQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKA 430
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL----RAC 230
G +PD +Y+ L+ K + +AL ++M +PN++TYN LL R C
Sbjct: 431 GLQPDVVLYSTLVDGCC----KNGSPDEALALLEEMAD-NGIRPNVITYNSLLDAYGRQC 485
Query: 231 AQAR--------------------NVD----------QVNAL-------FKELHESILAP 253
R +VD Q AL F+E+ ++ + P
Sbjct: 486 LMVRKNFPKLRFFLLPRVTMLLKPSVDYDQQSLVDPKQKQALVLAAARVFREMAKNGVKP 545
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
++ T++ +++A +++ S+L M+ + +T LL+
Sbjct: 546 NVVTFSSILNACSHCASVEDASSLLEAMRVFDGRVYGVTHGLLM 589
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 173/370 (46%), Gaps = 12/370 (3%)
Query: 107 VRSEHCFLL--------FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKK 158
+R CF L LG ++ LE+F +++ Y D Y+ LI+++ +
Sbjct: 167 IRKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQDESYSLDVYAYTSLISILSRA 226
Query: 159 GQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKP 218
+ + LF M+ G R + YN ++ + D + + FQ+MK +E P
Sbjct: 227 RRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGD---SWDRIQSLFQEMKDLE-ISP 282
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
+ TYN ++ AC Q + + LF+E+ E+ P+ TYN ++D YGK GM KE +L
Sbjct: 283 DDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELL 342
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
M++ P+I+T+N LI +Y + D+ + KSL+ P T+ ++I + +A
Sbjct: 343 VEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRA 402
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
KA F +M TP+ +TY +I +YG + + ++F + + + T
Sbjct: 403 ERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTW 462
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N++L+++ G+ TE +F G P T+ +L + Y + + + K + +
Sbjct: 463 NSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLR 522
Query: 459 NGIVPNKRFF 468
G+ P F
Sbjct: 523 TGLQPTVPTF 532
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 162/343 (47%), Gaps = 6/343 (1%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
+ D W + +F+ M K D Y+ +I + + A+ LF EM+ +GC P+
Sbjct: 261 RGDSWDRIQSLFQEM-KDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNR 319
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
YNAL+ ++ + A L + G+ PNIVTYN L+ A A+A D+
Sbjct: 320 VTYNALL--DVYGKGGMHKEASELLVEMEAAGI---SPNIVTYNELIAAYARAGLCDEAA 374
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
AL K L L PD +TY ++ A+ + ++ + M+ C P+I+T+N+LID Y
Sbjct: 375 ALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIY 434
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
G+ + D M +VFK + P L T+NS++ ++G + + VF++M Y P
Sbjct: 435 GRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGV 494
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
T+ +I YG C V + +I+ L + G V T A++ + G + + + +
Sbjct: 495 DTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQE 554
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
G+ + + L +Y + ++K + +E++ P
Sbjct: 555 MAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQP 597
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 175/428 (40%), Gaps = 48/428 (11%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L +++++ + LE F M+K + Y+ LI + G+ + M +F M+
Sbjct: 395 LISAFNRAERYEKALETFTEMRKTNC-TPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEK 453
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
C PD +N+L L + L + F++MK P + T+NIL+ +
Sbjct: 454 NCTPDLVTWNSL----LKSFGNCGMLTEVSNVFREMKRAGY-MPGVDTFNILIECYGRCG 508
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
VD ++K L + L P + T+ +M + + G ++ E V M +
Sbjct: 509 YVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHA 568
Query: 295 LLIDSYGK-------RQAFDKMEQVFKS-----------------------------LMH 318
LI SY R+ D++E+ K L
Sbjct: 569 GLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCGMDNEAQLALNQLYD 628
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
+ P + FN+MI K +A + +++ + P +TY C+++MYG +
Sbjct: 629 NGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYYK 688
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A E+ E+ + GK + T N +L +Y +G +A +F + V PD+ T+ L
Sbjct: 689 AEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVG 748
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLA------GSQSGSAKTDLT 492
+Y+ + + +++ M ++G P + F L+ ++ + + G G ++
Sbjct: 749 SYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGYNRNASPSRKKPGGDGGGRPIEMI 808
Query: 493 RSLSTAKS 500
+ L AK+
Sbjct: 809 KELDPAKN 816
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 135/315 (42%), Gaps = 39/315 (12%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
+ +G++G+ + A+ +F +R C V A I + L ++ L AL F+ +
Sbjct: 147 FVKALGRQGKWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQ---LPAALELFESL 203
Query: 211 KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
K E ++ Y L+ ++AR D+ LF+ M G+ G
Sbjct: 204 KQDESYSLDVYAYTSLISILSRARRFDEGITLFE----------------TMQREGQRG- 246
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR-QAFDKMEQVFKSLMHSKEKPTLPTFN 329
+ +T+N+++D YGKR ++D+++ +F+ + + P T+N
Sbjct: 247 ------------------NAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYN 288
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
+MI + +A +FQ+M P+ +TY ++ +YG A E+ E+
Sbjct: 289 TMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAA 348
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
G + T N ++ AY GL EA L ++ + G+ PD TY L A+ +A E
Sbjct: 349 GISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKA 408
Query: 450 QKLLKRMEQNGIVPN 464
+ M + PN
Sbjct: 409 LETFTEMRKTNCTPN 423
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 1/189 (0%)
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK-ARLQGKAEYV 347
D+ + LI + + FD+ +F+++ ++ T+N M+ YGK + + +
Sbjct: 212 DVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSL 271
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
FQ+M ++ +P TY +IT + A +F E+ + G T NA+L+ Y
Sbjct: 272 FQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGK 331
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
G+ EA L G++P+ TY L AY +A + + L K + G+ P++
Sbjct: 332 GGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFT 391
Query: 468 FLEALETFS 476
+ + F+
Sbjct: 392 YCTLISAFN 400
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 11/235 (4%)
Query: 264 AYGKNGMIKEMESVLSRMKSNQC-KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
A G+ G K+ V ++ + C K + ++ G + ++F+SL +
Sbjct: 150 ALGRQGKWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQDESY 209
Query: 323 P-TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG-YCDNVSRAR 380
+ + S+I +AR + +F+ M + +TY ++ +YG D+ R +
Sbjct: 210 SLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQ 269
Query: 381 EIFDELSKLGKDMKVS----TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+F E+ KD+++S T N M+ A N EA LF+ G P+ TY L
Sbjct: 270 SLFQEM----KDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNAL 325
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDL 491
Y K M + +LL ME GI PN + E + ++ + ++ + K L
Sbjct: 326 LDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSL 380
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 153/339 (45%), Gaps = 11/339 (3%)
Query: 130 EVFRWMQKQRW--YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
E K W + D IY+ LI + K G T A+ L M C+PD VY LI
Sbjct: 162 EALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLI 221
Query: 188 TAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
H+ K + +A F +M KG+ PNIVT N L+ A VN L E
Sbjct: 222 ----HSLCKDRQQTQAFNLFSEMITKGI---SPNIVTCNSLVYALCNLGEWKHVNTLLNE 274
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ +S + P+ + V+DA K GM+ + V+ M + +PD++T+ LID + R
Sbjct: 275 MVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSE 334
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
D+ +VF ++H P + ++N++I Y K KA Y+F++M K P+ +TY
Sbjct: 335 MDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNT 394
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+I + + A +F E+ G+ + T +L+ C N +A L +
Sbjct: 395 LIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSN 454
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ PD Y ++ +A E + L + G+ PN
Sbjct: 455 LDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPN 493
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 121/276 (43%), Gaps = 5/276 (1%)
Query: 135 MQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR 194
M Q D Y+ LI + + A+ +F M + GC P+ YN LI +
Sbjct: 309 MMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYC--- 365
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
K + + KA+ F++M ++ PN VTYN L+ + ALF+E+ PD
Sbjct: 366 -KIERMDKAMYLFEEM-CRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPD 423
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
+ TY ++D KN + + ++L ++ + PDI + ++ID + + +F
Sbjct: 424 LVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFS 483
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
+L KP + T+N M K L +A +F +M + TY I + +
Sbjct: 484 NLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNN 543
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
SRA ++ +E+ G VST ++ +GL
Sbjct: 544 ETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGL 579
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/320 (20%), Positives = 136/320 (42%), Gaps = 11/320 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++K++ + K + + L +M + G + N LI + H ++ L
Sbjct: 77 FAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHL-NRVNFAFSVLAKI 135
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K+ C+P+ ++ L++ + + LF ++ PD+ Y +++ K
Sbjct: 136 LKLG----CQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCK 191
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G +L M+ C+PD++ + LI S K + + +F ++ P + T
Sbjct: 192 TGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVT 251
Query: 328 FNSMIINYGKARLQGKAEYV---FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
NS++ Y L G+ ++V +M K P+ I+ ++ V++A ++ D
Sbjct: 252 CNSLV--YALCNL-GEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVD 308
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ + G + V T A+++ +C+ EA +F+ + G P+ +Y L Y K
Sbjct: 309 MMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIE 368
Query: 445 MKELVQKLLKRMEQNGIVPN 464
+ L + M + ++PN
Sbjct: 369 RMDKAMYLFEEMCRQKLIPN 388
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 32/223 (14%)
Query: 100 LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG 159
+N Y K+ R + LFEE M +Q+ I +T Y+ LI + G
Sbjct: 361 INGYCKIERMDKAMYLFEE----------------MCRQKL-IPNTVTYNTLIHGLCHVG 403
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALI-----TAHLHTRDKAKALAKALGYFQKMKGME 214
+ + A+ LF EM G PD Y L+ HL DKA AL KA+ +G
Sbjct: 404 RLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHL---DKAMALLKAI------EG-S 453
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
P+I Y I++ +A ++ LF L L P+++TYN + K G++ E
Sbjct: 454 NLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEA 513
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
+ M N C D T+N + + + + Q+ + ++
Sbjct: 514 TKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEML 556
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 133/319 (41%), Gaps = 51/319 (15%)
Query: 191 LHTRDKAK-----ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
LH R ++K L AL F +M M P+IV + +L + + + V +L ++
Sbjct: 41 LHNRFRSKYLHFNTLDDALSSFNRMLHMHP-PPSIVDFAKILTSITKVKRYSTVLSLSRK 99
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR-- 303
+ + ++YT N +++++ + SVL+++ C+PD +F LI
Sbjct: 100 MDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQ 159
Query: 304 -----QAFDKM----------------------------EQVFKSLMHSKEKPTLPTFNS 330
FDKM ++ +S+ +P + + +
Sbjct: 160 IGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGT 219
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
+I + K R Q +A +F +M +P+ +T C +Y C N+ + + L+++
Sbjct: 220 LIHSLCKDRQQTQAFNLFSEMITKGISPNIVT--CNSLVYALC-NLGEWKHVNTLLNEM- 275
Query: 391 KDMKVS----TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT-KANM 445
D K+ +L +++A C G+ +A + + GV PD TY L + ++ M
Sbjct: 276 VDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEM 335
Query: 446 KELVQKLLKRMEQNGIVPN 464
E V K+ M G PN
Sbjct: 336 DEAV-KVFDMMVHKGCAPN 353
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 181/416 (43%), Gaps = 46/416 (11%)
Query: 102 KYVKVVRSEHCF-------LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAV 154
K ++V++ C L + LGK+ + + + + R M+KQ YS L+A
Sbjct: 549 KLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCE-PSVVTYSSLMAS 607
Query: 155 MGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK--G 212
K+ Q ++ LF EM GC D S Y+ +I + D + +AL F +MK G
Sbjct: 608 FYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDD----VDQALDVFGRMKEEG 663
Query: 213 ME--------------------------------RCKPNIVTYNILLRACAQARNVDQVN 240
ME P+ YNI++ ++ VD+
Sbjct: 664 MEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEAC 723
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
L + + PD++TY ++D GK+G ++E ++ ++M +PD++ + L+D
Sbjct: 724 KLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVL 783
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
GK +F+++ + P + T++S+I + GK +A Y F+ + TP+
Sbjct: 784 GKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNV 843
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
Y +I +G V RA E+F+E+ + + T N +L G A+ L E
Sbjct: 844 GVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEE 903
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+G PD TY +L K M + + KRM++ GIVP+ F +E+
Sbjct: 904 MEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLG 959
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 153/323 (47%), Gaps = 6/323 (1%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ L KS++ + ++ M+ Q + D Y+ L+ +GK G+ A +F++M
Sbjct: 708 IMVNGLVKSNRVDEACKLVDSMKNQN-ILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTE 766
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G PD Y +L + K L+ AL F+ M +RC P++VTY+ L+ + +
Sbjct: 767 EGHEPDVVAYTSL----MDVLGKGGKLSHALIIFRAM-AKKRCVPDVVTYSSLIDSLGKE 821
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
V++ F+ P++ Y+ ++D++GK GM+ + M+ QC P+I+T+
Sbjct: 822 GRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTY 881
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N L+ K + E++ + + P L T+N +I GK + +AE F++M
Sbjct: 882 NNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKE 941
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P IT+ +I G D + A E+FD + + G + V T N +++ G E
Sbjct: 942 KGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHE 1001
Query: 414 ADLLFENSHNMGVTPDSSTYKLL 436
A ++F G PD T ++
Sbjct: 1002 AAMIFHEMKVKGCMPDGITIGIM 1024
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 185/386 (47%), Gaps = 14/386 (3%)
Query: 86 LMRSFSDKEPLVRTLNKYVKVVRSEHCF-------LLFEELGKSDKWLQCLEVFRWMQKQ 138
LM SF ++ +L+ + ++VR + C L+ L KSD Q L+VF M K+
Sbjct: 604 LMASFYKRDQEEESLSLFDEMVR-KGCVADVSTYSLVINCLCKSDDVDQALDVFGRM-KE 661
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
G Y L++ + K + A+ +F+E++ S PD VYN ++ + K+
Sbjct: 662 EGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLV----KSN 717
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
+ +A MK + P++ TY LL ++ +++ +F ++ E PD+ Y
Sbjct: 718 RVDEACKLVDSMKN-QNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAY 776
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
+MD GK G + + M +C PD++T++ LIDS GK ++ F++ +
Sbjct: 777 TSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSIS 836
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
P + ++S+I ++GK + +A +F++M + P+ +TY +++ ++
Sbjct: 837 KGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNV 896
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A ++ +E+ K+G + T N +++ G+ EA+ F+ G+ PD T+ L +
Sbjct: 897 AEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIE 956
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPN 464
+ K + +L ME+ G P+
Sbjct: 957 SLGKVDKLLEACELFDSMEEEGYNPS 982
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 173/398 (43%), Gaps = 44/398 (11%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L K+ + + EVF M++ D Y+ LI +GK G+ +A LF EM++
Sbjct: 363 LVNGLAKAGRLEEACEVFVEMKENNCS-PDAIAYNTLIDGLGKAGEADMACGLFKEMKDR 421
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P+ YN +I+ KA +A F +K + P++ TYN L+ +
Sbjct: 422 GLVPNLRTYNIMIS----VLGKAGRQPEAWQLFHDLK-EQGAVPDVFTYNTLIDVLGKGG 476
Query: 235 NVDQVNALFKEL----------------HESILA--------PDI-------YTYNGVMD 263
+D+V A+ KE+ HE + P + TYN +M
Sbjct: 477 QMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMS 536
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
A+ NG + E +L MK ++C P ++T+ L+D GK D+ + + + +P
Sbjct: 537 AFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEP 596
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
++ T++S++ ++ K + ++ +F +M TY +I D+V +A ++F
Sbjct: 597 SVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVF 656
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ + G + + +L + + A +F + PD+ Y ++ K+
Sbjct: 657 GRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKS 716
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
N + KL+ M+ I+P+ L T++S L G
Sbjct: 717 NRVDEACKLVDSMKNQNILPD-------LFTYTSLLDG 747
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 162/399 (40%), Gaps = 48/399 (12%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L G ++ LE+F M K T +Y+ ++ ++ K G A+ +F ++
Sbjct: 223 LLRTFGSTNNVSGALEIFNQM-KSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQF 281
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQ 232
+PD + + H+ +++ L A Q+M G++ P + T+ +L+ A +
Sbjct: 282 RIQPDAQTFRIFV----HSFNRSGRLDPAAEPIQEMIKSGID---PGVHTFTVLIDALVK 334
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+ N+D+ F + +P++ TY +++ K G ++E V MK N C PD I
Sbjct: 335 SGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIA 394
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N LID GK D +FK + P L T+N MI GKA Q +A +F +
Sbjct: 395 YNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLK 454
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS---------------- 396
P TY +I + G + + I E+ + G + +S
Sbjct: 455 EQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADR 514
Query: 397 ---------------TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
T N ++ A+ NG EA L E P TY L
Sbjct: 515 TVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLG 574
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLA 480
KA + LL+ ME+ G P ++ T+SS +A
Sbjct: 575 KAGRLDEAVSLLREMEKQGCEP-------SVVTYSSLMA 606
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 148/352 (42%), Gaps = 40/352 (11%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L++ G A+ L M+ C P Y L+ KA L +A+
Sbjct: 531 YNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDG----LGKAGRLDEAVSLL 586
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M+ + C+P++VTY+ L+ + + ++ +LF E+ D+ TY+ V++ K
Sbjct: 587 REME-KQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCK 645
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS-------- 319
+ + + V RMK +P + + L+ S K + D Q+F L S
Sbjct: 646 SDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFV 705
Query: 320 ------------------------KEKPTLP---TFNSMIINYGKARLQGKAEYVFQKMT 352
K + LP T+ S++ GK+ +A +F KMT
Sbjct: 706 YNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMT 765
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ P + Y ++ + G +S A IF ++K V T ++++++ G
Sbjct: 766 EEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVE 825
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA FENS + G TP+ Y L ++ K M + +L + M++ PN
Sbjct: 826 EAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPN 877
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 103/254 (40%), Gaps = 10/254 (3%)
Query: 220 IVTYNILLRACAQARNVDQV----NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
+ TY ++++ A A+ D V A++KE H ++ ++ +G +
Sbjct: 182 VGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRI----SMHLLTSLLRTFGSTNNVSGAL 237
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
+ ++MKS C P +N +++ K + VF L + +P TF + ++
Sbjct: 238 EIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSF 297
Query: 336 GK-ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
+ RL AE + Q+M P T+ +I N+ A + F+ + L
Sbjct: 298 NRSGRLDPAAEPI-QEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPN 356
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
V T ++ G EA +F +PD+ Y L KA ++ L K
Sbjct: 357 VVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFK 416
Query: 455 RMEQNGIVPNKRFF 468
M+ G+VPN R +
Sbjct: 417 EMKDRGLVPNLRTY 430
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 72/160 (45%), Gaps = 10/160 (6%)
Query: 324 TLPTFNSMIINYGKARLQGKAE--YVFQKMTAMKYTPSFITYECIITM---YGYCDNVSR 378
T+ T+ MI RL G E V Q +TAM I+ + ++ +G +NVS
Sbjct: 181 TVGTYTLMI-----KRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSG 235
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A EIF+++ G + + N +LE G A ++F + PD+ T+++
Sbjct: 236 ALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVH 295
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
++ ++ + + ++ M ++GI P F ++ S
Sbjct: 296 SFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKS 335
>gi|224090111|ref|XP_002308939.1| predicted protein [Populus trichocarpa]
gi|222854915|gb|EEE92462.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 181/402 (45%), Gaps = 7/402 (1%)
Query: 65 RPRSKRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDK 124
R R + R ++ ++V+ ++ + + LN++V ++ LL +E+ +
Sbjct: 55 RIRVQGDRFQKDWSVSQVVQKVLELDHKSDDVEGLLNRWVGRFARKNFPLLIKEITQKGS 114
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
+ VFRWM+ QR Y A T IY+ +I + + T A LF EM+ C+PD N
Sbjct: 115 IEHSILVFRWMKNQRNYCARTDIYNMMIRLHARHNWTDQARGLFFEMQKWRCKPDAETCN 174
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
ALI AH + A+ QK P+ TYN L+ AC + N + L K
Sbjct: 175 ALINAHGRSGQWRWAMNIMEDMLQKA-----IPPSRSTYNNLINACGSSGNWREALKLCK 229
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
++ E+ + PD+ T+N ++ AY + S MK +PD T N++I K
Sbjct: 230 KMTENGVGPDLVTHNIILSAYKTGAQYAKALSYFELMKGTNIRPDTTTLNIIIYCLTKLG 289
Query: 305 AFDKMEQVFKSLMHSKEK--PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
++K +FKS+ + + P + TF S+I Y VF M A P+ ++
Sbjct: 290 QYEKAIGIFKSMREKRAECHPDVVTFTSIIHLYSVNGQIENCRAVFSTMVAEGLKPNIVS 349
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y ++ Y A +F+ + G V + ++L +Y + P +A +FE
Sbjct: 350 YNTLMGAYASHGMNKEALSVFNAIKNSGLRPDVVSYTSLLNSYGRSQQPKKAREVFEMMK 409
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ P+ +Y + AY + ++L+ MEQ+GI PN
Sbjct: 410 RDKLKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQDGIYPN 451
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 166/362 (45%), Gaps = 8/362 (2%)
Query: 109 SEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLF 168
+E C L G+S +W + + M Q+ Y+ LI G G R A+ L
Sbjct: 170 AETCNALINAHGRSGQWRWAMNIMEDML-QKAIPPSRSTYNNLINACGSSGNWREALKLC 228
Query: 169 SEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLR 228
+M +G PD +N +++A+ AKAL YF+ MKG +P+ T NI++
Sbjct: 229 KKMTENGVGPDLVTHNIILSAY----KTGAQYAKALSYFELMKGTN-IRPDTTTLNIIIY 283
Query: 229 ACAQARNVDQVNALFKELHE--SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+ ++ +FK + E + PD+ T+ ++ Y NG I+ +V S M +
Sbjct: 284 CLTKLGQYEKAIGIFKSMREKRAECHPDVVTFTSIIHLYSVNGQIENCRAVFSTMVAEGL 343
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
KP+I+++N L+ +Y + VF ++ +S +P + ++ S++ +YG+++ KA
Sbjct: 344 KPNIVSYNTLMGAYASHGMNKEALSVFNAIKNSGLRPDVVSYTSLLNSYGRSQQPKKARE 403
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
VF+ M K P+ ++Y +I YG ++ A E+ E+ + G ++ +L A
Sbjct: 404 VFEMMKRDKLKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQDGIYPNAVSICTLLAACG 463
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
D++ + + + ++ Y +Y E + + M ++ ++P+
Sbjct: 464 RCSRKVNIDVVLQAAERRHIKLNTIAYNSAIGSYMNVGEFEKATSMYRSMRKSKVIPDAV 523
Query: 467 FF 468
F
Sbjct: 524 TF 525
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 165/352 (46%), Gaps = 24/352 (6%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYI-ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
L K ++ + + +F+ M+++R D ++ +I + GQ +FS M G +
Sbjct: 285 LTKLGQYEKAIGIFKSMREKRAECHPDVVTFTSIIHLYSVNGQIENCRAVFSTMVAEGLK 344
Query: 178 PDPSVYNALITAHL-HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
P+ YN L+ A+ H +K +AL F +K +P++V+Y LL + +++
Sbjct: 345 PNIVSYNTLMGAYASHGMNK-----EALSVFNAIKN-SGLRPDVVSYTSLLNSYGRSQQP 398
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
+ +F+ + L P+I +YN ++DAYG NG++ E VL M+ + P+ ++ L
Sbjct: 399 KKAREVFEMMKRDKLKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQDGIYPNAVSICTL 458
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
+ + G+ ++ V ++ K +NS I +Y KA +++ M K
Sbjct: 459 LAACGRCSRKVNIDVVLQAAERRHIKLNTIAYNSAIGSYMNVGEFEKATSMYRSMRKSKV 518
Query: 357 TPSFITYECIIT----MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
P +T+ +I+ M YC+ A E E+ D+K+ EAY +G T
Sbjct: 519 IPDAVTFTVLISGCCKMTKYCE----ALEFLSEM----MDLKIPMTK---EAYS-SGKIT 566
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA+ +F G +PD TY ++ AY A + LL+ ME+ I P+
Sbjct: 567 EAESMFNKMKMAGCSPDVVTYTMMLHAYNAAEHWKKACALLQEMEEYNIQPD 618
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 24/149 (16%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL--- 200
+T Y+ I G+ A ++ MR S PD + LI+ +AL
Sbjct: 486 NTIAYNSAIGSYMNVGEFEKATSMYRSMRKSKVIPDAVTFTVLISGCCKMTKYCEALEFL 545
Query: 201 --------------------AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
+A F KMK M C P++VTY ++L A A + +
Sbjct: 546 SEMMDLKIPMTKEAYSSGKITEAESMFNKMK-MAGCSPDVVTYTMMLHAYNAAEHWKKAC 604
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNG 269
AL +E+ E + PD + +M A+ K G
Sbjct: 605 ALLQEMEEYNIQPDTIACSALMRAFNKGG 633
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 179/394 (45%), Gaps = 39/394 (9%)
Query: 109 SEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLF 168
++ CF++ + +G+S W + LE++ + Q+WY + + + +++V+GK Q +A+ +F
Sbjct: 196 TDFCFVV-KSVGQS-SWQRALELYECLTMQQWYATNARMVATILSVLGKANQEGIAVEIF 253
Query: 169 SE----------------------------------MRNSGCRPDPSVYNALITAHLHTR 194
++ MR GC PD +N LI A + +
Sbjct: 254 AKAESVIADTVQVYNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSC 313
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
LA L G +P+I+TYN L+ AC++ N+ + +F + + PD
Sbjct: 314 ATVSGLAIEL---LDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPD 370
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
++TYN ++ YG+ G + E + ++KSN PD +T+N L+ ++ K +K+ + +
Sbjct: 371 LWTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISE 430
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
++ T+N++I YGK +A +++ M + P +TY +I + G
Sbjct: 431 EMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKAS 490
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
+ A ++ E+ G + T +A++ AY G EA+ F G+ D Y
Sbjct: 491 KIEEASKVMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYS 550
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
++ + + N + L + M + G P+ +
Sbjct: 551 VMLDFFLRFNEIKKAAALYQEMIEAGFTPDTGLY 584
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 153/352 (43%), Gaps = 6/352 (1%)
Query: 111 HCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSE 170
H + E GK W Q E +QR D +++ LI G A +F+
Sbjct: 791 HIIDIIETYGKLKMW-QSAESIVENLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNT 849
Query: 171 MRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRAC 230
M G P N L+ A L + L + Q M ++ K +I+ ++L A
Sbjct: 850 MMREGPSPTVESVNGLLQA-LIVDGRLSELYVVIQELQDMD-LKISKSSIL---LMLEAF 904
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
AQA N+ +V ++ + + P ++ Y ++ + ++++ +LS M KPD+
Sbjct: 905 AQAGNLFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGEAGFKPDL 964
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
FN ++ Y + F M +++ + + P T+N++I Y + + + K
Sbjct: 965 QIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHK 1024
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M ++ P TY +I + +A E+F+EL G + S + M++ Y +G
Sbjct: 1025 MKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGD 1084
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+A+ L E G+ P+++T LL +Y K+ E ++LK + G V
Sbjct: 1085 HQKAENLLEIMKEAGIEPNTATMHLLMVSYGKSGQPEEADRILKNLRTMGAV 1136
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/365 (17%), Positives = 151/365 (41%), Gaps = 34/365 (9%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH---------------- 190
+Y LI K Q +A LFS+MR +G P +Y ++++ +
Sbjct: 719 MYESLIHECTKSEQFDIASQLFSDMRFNGVEPSECLYQSMVSVYCRIGFPETAQHLLYHA 778
Query: 191 -----------LHTRDKAKALAKALGYFQKMKGM-----ERC-KPNIVTYNILLRACAQA 233
+H D + K L +Q + + +RC K + +N L+ A A +
Sbjct: 779 EKNDIILDNVTVHIIDIIETYGK-LKMWQSAESIVENLRQRCSKMDRKVWNALIHAYAFS 837
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
++ A+F + +P + + NG++ A +G + E+ V+ ++ K +
Sbjct: 838 GCYERARAIFNTMMREGPSPTVESVNGLLQALIVDGRLSELYVVIQELQDMDLKISKSSI 897
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
L+++++ + ++++V+ + + PT+ + MI + + + +M
Sbjct: 898 LLMLEAFAQAGNLFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGE 957
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
+ P + ++ +Y + I+ + G T N ++ YC + P E
Sbjct: 958 AGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEE 1017
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
L ++G+ P TY+ + A++K + + ++L + + NG ++ F+ ++
Sbjct: 1018 GLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMK 1077
Query: 474 TFSSS 478
+ +S
Sbjct: 1078 MYRTS 1082
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/403 (19%), Positives = 160/403 (39%), Gaps = 68/403 (16%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ + VF M+ R D Y+ +I+V G+ G A LF +++++G PD YN+L
Sbjct: 354 EAIGVFSHMESNRCQ-PDLWTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSL 412
Query: 187 ITAH-------------------------------LHTRDKAKALAKALGYFQKMKGMER 215
+ A +H K +AL ++ MK R
Sbjct: 413 LYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGR 472
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
P+ VTY +L+ +A +++ + + E+ ++ + P ++TY+ ++ AY K G E E
Sbjct: 473 -NPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAE 531
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
+RM+ + K D + +++++D + + K +++ ++ + P + M+
Sbjct: 532 ETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAAALYQEMIEAGFTPDTGLYEVMLPAL 591
Query: 336 GKARLQGKAEYVFQKMTAM-KYTPSFITYECIITMYGYCDNVSRA------------REI 382
+ + E V Q + P I+ ++ G D+ ++ REI
Sbjct: 592 VRENMGDVIERVVQDTKELGSMNPHDIS--SVLVKGGCYDHGAKMLKVAISNGYELDREI 649
Query: 383 FD----------------ELSKLGKDMKVSTLNAMLEAY----CMNGLPTEADLLFENSH 422
F EL + ++ + + EA C G A + +
Sbjct: 650 FLSIMSSYSSSARYSEACELVEFFREHAPDDIQMITEALIIILCKAGKLDAALEEYRSRG 709
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+G + Y+ L TK+ ++ +L M NG+ P++
Sbjct: 710 GLGTFRSCTMYESLIHECTKSEQFDIASQLFSDMRFNGVEPSE 752
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 2/155 (1%)
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM-YGYCDNVSR-ARE 381
T+ +N+M+ Y + K +F M P +++ +I C VS A E
Sbjct: 263 TVQVYNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSCATVSGLAIE 322
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ DE+ K G + T N ++ A EA +F + + PD TY + Y
Sbjct: 323 LLDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYG 382
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+ + L ++++ NG P+ + L FS
Sbjct: 383 RCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFS 417
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 161/351 (45%), Gaps = 6/351 (1%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L G+S + +E+FR M K + D Y L+ +GK G+ + A F M
Sbjct: 105 VLIRYFGRSGQLDSAMEMFREM-KIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLE 163
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G P+ YN L+ A K L ALG F +MK +P++VTYNILL A A
Sbjct: 164 RGLTPNIPTYNLLMDAF----RKVGQLDMALGLFAEMK-RRGFQPSVVTYNILLDALCSA 218
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
V LF ++ +PD YTY+ +++ GK+G ++E V M D++ +
Sbjct: 219 GRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNY 278
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N L+ + K D++ ++ K + P +FN+++ GKA A VF +M
Sbjct: 279 NSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVE 338
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P I+Y +I Y + ++AR++ +E+ + G + T N+++ +G E
Sbjct: 339 SGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDE 398
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A + E G PD TY L K + +L ++M+ G+ P+
Sbjct: 399 AFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPD 449
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 161/338 (47%), Gaps = 11/338 (3%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
F ++G+ D L +F M K+R + Y+ L+ + G+ A LF +M G
Sbjct: 180 FRKVGQLD---MALGLFAEM-KRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDG 235
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQAR 234
C PD Y+ L+ K+ + +A F++M ++R ++V YN LL A+A
Sbjct: 236 CSPDSYTYSTLVNGL----GKSGRVEEAHKVFREM--VDRGVAVDLVNYNSLLATLAKAG 289
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
N+D+V L KE+ PD +++N +MDA GK V +RM + CKPD+I++N
Sbjct: 290 NMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYN 349
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+LIDSY + + Q+ + ++ + P T+NS+I +A V ++M
Sbjct: 350 ILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETA 409
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P +TY ++ M G RA +F ++ G + + ++ + EA
Sbjct: 410 GCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEA 469
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
+LF++ +G D + Y++L +A +A EL +L
Sbjct: 470 LVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQL 507
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 147/322 (45%), Gaps = 6/322 (1%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
L LGK+ + + F M +R + Y+ L+ K GQ +A+ LF+EM+
Sbjct: 140 FLVNALGKAGRVQEARSFFDAML-ERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKR 198
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G +P YN L+ A A + A F KM G + C P+ TY+ L+ ++
Sbjct: 199 RGFQPSVVTYNILLDALC----SAGRVGAARKLFHKMTG-DGCSPDSYTYSTLVNGLGKS 253
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
V++ + +F+E+ + +A D+ YN ++ K G + + ++ M PD +F
Sbjct: 254 GRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSF 313
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N ++D+ GK D +VF ++ S KP L ++N +I +Y + +A + ++M
Sbjct: 314 NTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVE 373
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
+ P TY +I V A + +E+ G V T N +++ G
Sbjct: 374 AGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQR 433
Query: 414 ADLLFENSHNMGVTPDSSTYKL 435
A LF+ + GV PD+ +Y +
Sbjct: 434 AARLFQQMKDKGVEPDTLSYAV 455
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 175/388 (45%), Gaps = 11/388 (2%)
Query: 85 VLMRSFSDKEPLVRTLNKYV---KVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWY 141
V++ S+ +PL L + V + +R L G+ +K ++F Q + +
Sbjct: 3 VVLASWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFN--QAESFA 60
Query: 142 IADT-GIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
+ T ++KLI ++ G+ A ++ ++ GC+ D YN LI ++ L
Sbjct: 61 CSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYF----GRSGQL 116
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
A+ F++MK ++ +P+ TY L+ A +A V + + F + E L P+I TYN
Sbjct: 117 DSAMEMFREMK-IKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNL 175
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
+MDA+ K G + + + MK +P ++T+N+L+D+ ++F +
Sbjct: 176 LMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDG 235
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P T+++++ GK+ +A VF++M + Y ++ N+ R
Sbjct: 236 CSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVW 295
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
++ E+S+ G + N +++A P A +F G PD +Y +L +Y
Sbjct: 296 KLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSY 355
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFF 468
+ +++L+ M + G +P + +
Sbjct: 356 ARFGDAAQARQMLEEMVEAGFIPETKTY 383
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 175/390 (44%), Gaps = 12/390 (3%)
Query: 96 LVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVM 155
VR + ++ + ++ LGK + + ++ +I D Y+ LI
Sbjct: 172 FVRNREDFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDGVHI-DIYAYTSLITAY 230
Query: 156 GKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER 215
G+ R A+ +F ++ GCRP YN ++ + +K G MK
Sbjct: 231 ASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVY---GKMGMPWSKIAGLVDSMKS-SG 286
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
P++ TYN L+ +C + ++ +F+E+ + +PD TYN ++D YGK+ +E
Sbjct: 287 VAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAM 346
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
VL M+++ P I+T+N LI +Y + D+ ++ ++ KP + T+ +++ +
Sbjct: 347 EVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGF 406
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
K A VF++M P+ T+ +I M+G N ++F+E+ +
Sbjct: 407 EKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDI 466
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
T N +L + NG+ +E +F+ G P+ T+ L AY++ + + +R
Sbjct: 467 VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRR 526
Query: 456 MEQNGIVPNKRFFLEALETFSSSLAGSQSG 485
M G+ P+ L T+++ LA G
Sbjct: 527 MLDAGVTPD-------LSTYNAVLAALARG 549
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 172/402 (42%), Gaps = 75/402 (18%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ L++ K G+ AM +F EMR +GC+P+ +NALI H + + +
Sbjct: 395 DVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGN----FVEM 450
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH---------------- 247
+ F+++K E C P+IVT+N LL Q +V+ +FKE+
Sbjct: 451 MKVFEEIKICE-CVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLIS 509
Query: 248 -------------------ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
++ + PD+ TYN V+ A + G+ ++ E VL+ MK +CKP
Sbjct: 510 AYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKP 569
Query: 289 DIITFNLLIDSYGKRQAFDKM-----------------------------------EQVF 313
+ +T+ L+ +Y + ++M E+ F
Sbjct: 570 NELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAF 629
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
L P + T N+M+ YG+ R+ K + + +TPS TY ++ MY
Sbjct: 630 LELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRT 689
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
++ ++ +I E+ G + + N ++ AYC NG EA +F + G+ PD TY
Sbjct: 690 EHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITY 749
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+Y +M ++K M +N PN+ + ++ F
Sbjct: 750 NTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWF 791
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 162/332 (48%), Gaps = 8/332 (2%)
Query: 148 YSKLIAVMGKKGQ--TRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALG 205
Y+ ++ V GK G +++A L M++SG PD YN LI++ + +A
Sbjct: 258 YNVILNVYGKMGMPWSKIA-GLVDSMKSSGVAPDLYTYNTLISSC----RRGSLYEEAAE 312
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
F++MK P+ VTYN LL ++R + + KE+ S AP I TYN ++ AY
Sbjct: 313 VFEEMKA-AGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAY 371
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
++G++ E + S+M KPD+ T+ L+ + K D +VF+ + + +P +
Sbjct: 372 ARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNI 431
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
TFN++I +G + VF+++ + P +T+ ++ ++G S +F E
Sbjct: 432 CTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKE 491
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ + G + T N ++ AY G +A ++ + GVTPD STY + A + +
Sbjct: 492 MKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGL 551
Query: 446 KELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
E +K+L M+ PN+ + L +++
Sbjct: 552 WEQSEKVLAEMKDGRCKPNELTYCSLLHAYAN 583
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 164/350 (46%), Gaps = 6/350 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + GKS + + +EV + M+ + Y+ LI+ + G AM L S+M
Sbjct: 332 LLDVYGKSRRPREAMEVLKEMEAS-GFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKK 390
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G +PD Y L++ +K A+ F++M+ + C+PNI T+N L++
Sbjct: 391 GIKPDVFTYTTLLSGF----EKTGKDDYAMKVFEEMR-VAGCQPNICTFNALIKMHGNRG 445
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
N ++ +F+E+ PDI T+N ++ +G+NGM E+ V MK P+ TFN
Sbjct: 446 NFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFN 505
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
LI +Y + FD+ +++ ++ + P L T+N+++ + L ++E V +M
Sbjct: 506 TLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDG 565
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ P+ +TY ++ Y V R + +E+ + + L ++ Y + L TE
Sbjct: 566 RCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTET 625
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ F G +PD +T + Y + M ++L ++ +G P+
Sbjct: 626 ERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPS 675
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 162/333 (48%), Gaps = 14/333 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI+ + A +F EM+ +G PD YNAL+ + +R +A+
Sbjct: 290 DLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAM--- 346
Query: 204 LGYFQKMKGMERC--KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+ +K ME P+IVTYN L+ A A+ +D+ L ++ + + PD++TY +
Sbjct: 347 ----EVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTL 402
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ + K G V M+ C+P+I TFN LI +G R F +M +VF+ + +
Sbjct: 403 LSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICEC 462
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P + T+N+++ +G+ + + VF++M + P T+ +I+ Y C +A
Sbjct: 463 VPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMA 522
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
I+ + G +ST NA+L A GL +++ + + P+ TY L AY
Sbjct: 523 IYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAY- 581
Query: 442 KANMKELVQKLLKRMEQ--NGIVPNKRFFLEAL 472
AN KE V+++ E+ +GI+ + L+ L
Sbjct: 582 -ANGKE-VERMSALAEEIYSGIIEPQAVLLKTL 612
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 125/315 (39%), Gaps = 86/315 (27%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VF+ M K+ ++ + ++ LI+ + G AM ++ M ++G PD S YNA++ A
Sbjct: 488 VFKEM-KRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAA- 545
Query: 191 LHTRDKAKALAKALGYFQKMKGME-----RCKPNIVTYNILLRACAQARNVDQVNAL--- 242
LA+ + Q K + RCKPN +TY LL A A + V++++AL
Sbjct: 546 ---------LARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEE 596
Query: 243 --------------------------------FKELHESILAPDIYTYNGVMDAYGKNGM 270
F EL E +PDI T N ++ YG+ M
Sbjct: 597 IYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRM 656
Query: 271 I-----------------------------------KEMESVLSRMKSNQCKPDIITFNL 295
+ ++ E +L + + KPDII+FN
Sbjct: 657 VSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNT 716
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
+I +Y + + ++F + P + T+N+ I +Y + +A V + M +
Sbjct: 717 VIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNE 776
Query: 356 YTPSFITYECIITMY 370
P+ TY +I +
Sbjct: 777 CKPNQNTYNSLIDWF 791
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 100/198 (50%), Gaps = 10/198 (5%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
KSD + F +++Q + D + ++++ G++ + + +++SG P
Sbjct: 618 KSDLLTETERAFLELREQ-GFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSL 676
Query: 181 SVYNALITAHLHTR--DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
+ YN+L+ + T +K++ + + + KGM KP+I+++N ++ A + + +
Sbjct: 677 TTYNSLMYMYSRTEHFEKSEDILREI----IAKGM---KPDIISFNTVIFAYCRNGRMKE 729
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+ +F E+ + LAPD+ TYN + +Y + M E V+ M N+CKP+ T+N LID
Sbjct: 730 ASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLID 789
Query: 299 SYGKRQAFDKMEQVFKSL 316
+ K D+ +L
Sbjct: 790 WFCKLNRRDEANSFISNL 807
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 172/365 (47%), Gaps = 12/365 (3%)
Query: 107 VRSEHCFLL--------FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKK 158
+R CF L LG ++ LE+F +++ Y D Y+ LI+++ +
Sbjct: 28 IRKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQDESYSLDVYAYTSLISILSRA 87
Query: 159 GQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKP 218
+ + LF M+ G R + YN ++ + + + + FQ+MK +E P
Sbjct: 88 RRFDEGITLFETMQREGQRGNAVTYNVMLDLY---GKRGDSWDRIQSLFQEMKDLE-ISP 143
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
+ TYN ++ AC Q + + LF+E+ E+ P+ TYN ++D YGK GM KE +L
Sbjct: 144 DDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELL 203
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
M++ P+I+T+N LI +Y + D+ + KSL+ P T+ ++I + +A
Sbjct: 204 VEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRA 263
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
KA F +M TP+ +TY +I +YG + + ++F + + + T
Sbjct: 264 ERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTW 323
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N++L+++ G+ TE +F G P T+ +L + Y + + + K + +
Sbjct: 324 NSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLR 383
Query: 459 NGIVP 463
G+ P
Sbjct: 384 TGLQP 388
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 162/343 (47%), Gaps = 6/343 (1%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
+ D W + +F+ M K D Y+ +I + + A+ LF EM+ +GC P+
Sbjct: 122 RGDSWDRIQSLFQEM-KDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNR 180
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
YNAL+ ++ + A L + G+ PNIVTYN L+ A A+A D+
Sbjct: 181 VTYNALL--DVYGKGGMHKEASELLVEMEAAGI---SPNIVTYNELIAAYARAGLCDEAA 235
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
AL K L L PD +TY ++ A+ + ++ + M+ C P+I+T+N+LID Y
Sbjct: 236 ALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIY 295
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
G+ + D M +VFK + P L T+NS++ ++G + + VF++M Y P
Sbjct: 296 GRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGV 355
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
T+ +I YG C V + +I+ L + G V T A++ + G + + + +
Sbjct: 356 DTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQE 415
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
G+ + + L +Y + ++K + +E++ P
Sbjct: 416 MAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQP 458
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 162/397 (40%), Gaps = 42/397 (10%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L +++++ + LE F M+K + Y+ LI + G+ + M +F M+
Sbjct: 256 LISAFNRAERYEKALETFTEMRKTNC-TPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEK 314
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
C PD +N+L L + L + F++MK P + T+NIL+ +
Sbjct: 315 NCTPDLVTWNSL----LKSFGNCGMLTEVSNVFREMKRAGY-MPGVDTFNILIECYGRCG 369
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
VD ++K L + L P + T+ +M + + G ++ E V M +
Sbjct: 370 YVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHA 429
Query: 295 LLIDSYGK-------RQAFDKMEQ-----------------------------VFKSLMH 318
LI SY R+ D++E+ L
Sbjct: 430 GLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMDNEAQLALNQLYD 489
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
+ P + FN+MI K +A + +++ + P +TY C+++MYG +
Sbjct: 490 NGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHK 549
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A E+ E+ + GK + T N +L +Y +G +A +F + V PD+ T+ L
Sbjct: 550 AEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVG 609
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+Y+ + + +++ M ++G P + F L+ +
Sbjct: 610 SYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGY 646
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 135/315 (42%), Gaps = 39/315 (12%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
+ +G++G+ + A+ +F +R C V A I + L ++ L AL F+ +
Sbjct: 8 FVKALGRQGKWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQ---LPAALELFESL 64
Query: 211 KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
K E ++ Y L+ ++AR D+ LF+ + G+ G
Sbjct: 65 KQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQRE----------------GQRG- 107
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR-QAFDKMEQVFKSLMHSKEKPTLPTFN 329
+ +T+N+++D YGKR ++D+++ +F+ + + P T+N
Sbjct: 108 ------------------NAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYN 149
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
+MI + +A +FQ+M P+ +TY ++ +YG A E+ E+
Sbjct: 150 TMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAA 209
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
G + T N ++ AY GL EA L ++ + G+ PD TY L A+ +A E
Sbjct: 210 GISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKA 269
Query: 450 QKLLKRMEQNGIVPN 464
+ M + PN
Sbjct: 270 LETFTEMRKTNCTPN 284
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/370 (19%), Positives = 148/370 (40%), Gaps = 41/370 (11%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y LI+ + + A+ F+EMR + C P+ YN LI + +K + K
Sbjct: 249 DEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIY-GRMEKLDDMMKV 307
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ Q+ + C P++VT+N LL++ + +V+ +F+E+ + P + T+N +++
Sbjct: 308 FKFMQE----KNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIE 363
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL--------------------------- 296
YG+ G + + + +P + TF L
Sbjct: 364 CYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQL 423
Query: 297 --------IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF-NSMIINYGKARLQGKAEYV 347
I SY F ++ + L S ++P + ++ Y K + +A+
Sbjct: 424 SDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMDNEAQLA 483
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
++ ++P + +I+M + RA ++ +E+ K T N ++ Y
Sbjct: 484 LNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGR 543
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
G+ +A+ + G P+ TY L +YTK + ++ M + P+
Sbjct: 544 EGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFT 603
Query: 468 FLEALETFSS 477
F + ++SS
Sbjct: 604 FNTLVGSYSS 613
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 88/191 (46%), Gaps = 1/191 (0%)
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK-ARLQGKAEYV 347
D+ + LI + + FD+ +F+++ ++ T+N M+ YGK + + +
Sbjct: 73 DVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSL 132
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
FQ+M ++ +P TY +IT + A +F E+ + G T NA+L+ Y
Sbjct: 133 FQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGK 192
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
G+ EA L G++P+ TY L AY +A + + L K + G+ P++
Sbjct: 193 GGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFT 252
Query: 468 FLEALETFSSS 478
+ + F+ +
Sbjct: 253 YCTLISAFNRA 263
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 101/235 (42%), Gaps = 11/235 (4%)
Query: 264 AYGKNGMIKEMESVLSRMKSNQC-KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
A G+ G K+ V ++ + C K + ++ G + ++F+SL +
Sbjct: 11 ALGRQGKWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQDESY 70
Query: 323 P-TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG-YCDNVSRAR 380
+ + S+I +AR + +F+ M + +TY ++ +YG D+ R +
Sbjct: 71 SLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQ 130
Query: 381 EIFDELSKLGKDMKVS----TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+F E+ KD+++S T N M+ A N EA LF+ G P+ TY L
Sbjct: 131 SLFQEM----KDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNAL 186
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDL 491
Y K M + +LL ME GI PN + E + ++ + ++ + K L
Sbjct: 187 LDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSL 241
>gi|302816774|ref|XP_002990065.1| hypothetical protein SELMODRAFT_130980 [Selaginella moellendorffii]
gi|300142185|gb|EFJ08888.1| hypothetical protein SELMODRAFT_130980 [Selaginella moellendorffii]
Length = 458
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 160/344 (46%), Gaps = 7/344 (2%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W L+VF ++ Q+WY G Y +L+ ++GK + A LF M GC P +
Sbjct: 36 QWEAALKVFELLRSQQWYQPYAGTYIRLLEMLGKCKRPDEAASLFQTMLADGCGPSREAF 95
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
AL++A+ ++ ++ A+ Q M C P++ TY++L+++C + + + L
Sbjct: 96 TALMSAYT----RSNLMSTAMEVLQAMNATPHCSPDVFTYSLLIKSCCDCGQLSRASDLL 151
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM---KSNQCKPDIITFNLLIDSY 300
++ + P+ TYN ++DAY K+G + ++ + +M S C+PD + N ++ +
Sbjct: 152 ADMTARGIQPNRVTYNIILDAYAKSGSLDKLHDLALQMLQSPSPSCRPDHWSRNAIVKGF 211
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
G R +ME+ F+ L + P T +S++ Y KA + K V + + Y
Sbjct: 212 GNRGDIRRMEEWFQRLTTPSDGPDSLTLHSLMAAYAKAEMFDKMHAVVRYIHRYHYQVDA 271
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
+TY +I YG ++ + F + G T ++ Y G+ + L E
Sbjct: 272 VTYNILINAYGRAGRKTQMLKTFTSMKCGGVRPDSVTYCTLINFYGKFGMQRKLPRLLEQ 331
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
V PD++ Y + AY +A+ + + M++ G P+
Sbjct: 332 MSMHKVQPDTALYNSVLDAYRRASDISSIDRYFAAMQEQGCKPD 375
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 2/134 (1%)
Query: 347 VFQKMTAMK-YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
VF+ + + + Y P TY ++ M G C A +F + G A++ AY
Sbjct: 43 VFELLRSQQWYQPYAGTYIRLLEMLGKCKRPDEAASLFQTMLADGCGPSREAFTALMSAY 102
Query: 406 CMNGLPTEA-DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ L + A ++L + +PD TY LL K+ LL M GI PN
Sbjct: 103 TRSNLMSTAMEVLQAMNATPHCSPDVFTYSLLIKSCCDCGQLSRASDLLADMTARGIQPN 162
Query: 465 KRFFLEALETFSSS 478
+ + L+ ++ S
Sbjct: 163 RVTYNIILDAYAKS 176
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 159/323 (49%), Gaps = 5/323 (1%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
++ +G++ L +V + G A FS MRN P N L LH K+
Sbjct: 216 VSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFL----LHRLSKSGNGQ 271
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+F M G P++ TYN+++ + +++ LF ++ E L+PD+ TYN +
Sbjct: 272 LVRKFFNDMIG-AGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSL 330
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+D YGK G ++E+ S+ + MK C PDIIT+N LI+ Y K + + + F + ++
Sbjct: 331 IDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGL 390
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
KP + T++++I + K + A +F M P+ TY +I N++ A +
Sbjct: 391 KPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWK 450
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ +++ + G + + T A+L+ C G EA+ +F + G++P+ Y L Y
Sbjct: 451 LLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYI 510
Query: 442 KANMKELVQKLLKRMEQNGIVPN 464
KA E K+LK+M + I P+
Sbjct: 511 KAERMEDAMKILKQMTECNIKPD 533
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 149/323 (46%), Gaps = 9/323 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI GK G LF+EM++ GC PD YN LI + K + + +A
Sbjct: 323 DVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYC----KFEKMPRA 378
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
YF +MK KPN+VTY+ L+ A + + LF ++ + L P+ +TY ++D
Sbjct: 379 FEYFSEMKN-NGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLID 437
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
A K G + E +L+ M K +I+T+ L+D K + E+VF+S++ P
Sbjct: 438 ANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISP 497
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRARE 381
+ +++ Y KA A + ++MT P I Y II +G+C + +
Sbjct: 498 NQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSII--WGHCSQRKLEETKL 555
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
I +E+ G +++AY G ++A F+ ++GV TY +L
Sbjct: 556 ILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLC 615
Query: 442 KANMKELVQKLLKRMEQNGIVPN 464
KA + EL RM G+ PN
Sbjct: 616 KAGIVELAVDYFCRMLSLGLQPN 638
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 147/354 (41%), Gaps = 42/354 (11%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS LI K+G + A+ LF +MR +G P+ Y +LI A+ KA L +A
Sbjct: 397 YSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANC----KAGNLTEAWKLL 452
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
M K NIVTY LL +A + + +F+ + + ++P+ Y ++ Y K
Sbjct: 453 NDML-QAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIK 511
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+++ +L +M KPD+I + +I + ++ ++ + + + M S+ P
Sbjct: 512 AERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEE-MKSRGISANPV 570
Query: 328 FNSMIIN-YGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT------------------ 368
++ II+ Y KA A FQ+M + + +TY +I
Sbjct: 571 ISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRM 630
Query: 369 ---------------MYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+ G C N + A+++FDE+ G ++ A+++ +G
Sbjct: 631 LSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNL 690
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
EA +L + + D Y L +++ +K M + GI+P +
Sbjct: 691 QEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEE 744
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/317 (19%), Positives = 131/317 (41%), Gaps = 9/317 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + K G+ A +F M G P+ VY AL+ ++ KA+ + A+
Sbjct: 467 YTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYI----KAERMEDAM--- 519
Query: 208 QKMKGMERC--KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+ +K M C KP+++ Y ++ R +++ + +E+ ++ + ++DAY
Sbjct: 520 KILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAY 579
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G + + M+ + I+T+ +LID K + F ++ +P +
Sbjct: 580 FKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNV 639
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
+ S+I K A+ +F +M TP + +I N+ A +
Sbjct: 640 AVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISR 699
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+++L + + +++ + G +A F G+ P+ L + Y K
Sbjct: 700 MTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQ 759
Query: 446 KELVQKLLKRMEQNGIV 462
+ +L ME+ G++
Sbjct: 760 LDEAIELKNEMERMGLI 776
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 83/213 (38%), Gaps = 4/213 (1%)
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
N C F++L + + ++ + F + + + P + N ++ K+
Sbjct: 213 NICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQL 272
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
F M PS TY +I ++ +R +F ++ ++G V T N++++
Sbjct: 273 VRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLID 332
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
Y G E LF ++G PD TY L Y K + M+ NG+ P
Sbjct: 333 GYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKP 392
Query: 464 NKRFFLEALETFSSSLAGSQSGSAK--TDLTRS 494
N + ++ F G G+ K D+ R+
Sbjct: 393 NVVTYSTLIDAFCKE--GMMQGAIKLFVDMRRT 423
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 152/305 (49%), Gaps = 7/305 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI+ ++G R A +F EM+ +G PD +N+L+ + KA+ +A
Sbjct: 255 DRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVY----GKARRHEEA 310
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+G +KM+ C P++VTYN L+ A + +++ L +E+ + PD+ TY ++
Sbjct: 311 IGVLKKMENAG-CTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLIS 369
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ G I + S M N C P++ T+N LI +G R F +M VF L + P
Sbjct: 370 GLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVP 429
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T+N+++ +G+ L + VF++M Y P TY +I+ Y C +A EI+
Sbjct: 430 DVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIY 489
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ + G +ST NA+L A G +A+ LF + PD +Y L AY A
Sbjct: 490 KRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAY--A 547
Query: 444 NMKEL 448
N K+L
Sbjct: 548 NAKKL 552
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 161/414 (38%), Gaps = 81/414 (19%)
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
FR M+ D Y+ LI+ + + G+ A+ +SEM +GC P+ YNALI H
Sbjct: 354 FRGMK------PDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMH- 406
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH---- 247
R K + + F ++ P++VT+N LL Q +V+ +FKE+
Sbjct: 407 GVRGK---FTEMMIVFDDLRSAGYV-PDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGY 462
Query: 248 -------------------------------ESILAPDIYTYNGVMDAYGKNGMIKEMES 276
E+ + PDI TYN V+ A + G + E
Sbjct: 463 IPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEK 522
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM--------------------------- 309
+ + M+ CKPD ++++ L+ +Y + DKM
Sbjct: 523 LFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNN 582
Query: 310 --------EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
E+ F+ L + + N+M+ YGK ++ K E V M S
Sbjct: 583 KVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAA 642
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
TY ++ MY + + I E+ G + N ++ AY G EA LF
Sbjct: 643 TYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEM 702
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
GV PD TY + K+Y M E L++ + G PN+R + LE +
Sbjct: 703 KCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYNSILEGY 756
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 141/325 (43%), Gaps = 41/325 (12%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VF+ M+K YI + Y LI+ + G AM ++ M +G PD S YNA+++A
Sbjct: 453 VFKEMKKA-GYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSAL 511
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
+ +A F +M+ + CKP+ ++Y+ LL A A A+ +D++ AL ++++
Sbjct: 512 A----RGGRWVQAEKLFAEMEDRD-CKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQR 566
Query: 251 LAP-----------------------------------DIYTYNGVMDAYGKNGMIKEME 275
+ P DI N ++ YGKN M+K++E
Sbjct: 567 IEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVE 626
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
VL+ MK N T+N L+ Y + +K E + + S +P ++N++I Y
Sbjct: 627 EVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIYAY 686
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
G+ +A +F +M P +TY I Y A ++ L G
Sbjct: 687 GRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNE 746
Query: 396 STLNAMLEAYCMNGLPTEADLLFEN 420
T N++LE YC +G EA N
Sbjct: 747 RTYNSILEGYCRHGRMVEAKSFLSN 771
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 145/305 (47%), Gaps = 13/305 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++ L+ V GK + A+ + +M N+GC P YN+LI+A++ K L +A
Sbjct: 290 DKVTFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYV----KDGLLEEA 345
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
L Q+M +GM KP++VTY L+ + +D A + E+ + +P++ TYN +
Sbjct: 346 LELKQEMEFRGM---KPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNAL 402
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ +G G EM V ++S PD++T+N L+ +G+ ++ VFK + +
Sbjct: 403 IKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGY 462
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P T+ S+I +Y + L +A ++++M P TY +++ +A +
Sbjct: 463 IPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEK 522
Query: 382 IFDELSKLGKDMKVSTL--NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+F E+ +D K L +++L AY + L E+ + + P + K L
Sbjct: 523 LFAEMED--RDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLV 580
Query: 440 YTKAN 444
K N
Sbjct: 581 NNKVN 585
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 128/295 (43%), Gaps = 36/295 (12%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK---------- 267
P+ Y L+ ++A A+F+ + + + P + TYN V+ Y K
Sbjct: 183 PDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVV 242
Query: 268 --------------------------NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
G+ +E + MK+ +PD +TFN L+D YG
Sbjct: 243 LVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYG 302
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
K + ++ V K + ++ P++ T+NS+I Y K L +A + Q+M P +
Sbjct: 303 KARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVV 362
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
TY +I+ + A + E+ + G + T NA+++ + + G TE ++F++
Sbjct: 363 TYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDL 422
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+ G PD T+ L + + + V + K M++ G +P + ++ + ++S
Sbjct: 423 RSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYS 477
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 132/278 (47%), Gaps = 35/278 (12%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
Q +E+++ M + Y D Y+ +++ + + G+ A LF+EM + C+PD Y++L
Sbjct: 484 QAMEIYKRMIEAGIY-PDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSL 542
Query: 187 ITAHLHTR--DKAKALAKAL-----------------------------GYFQKMKGMER 215
+ A+ + + DK KAL++ + FQ+++ R
Sbjct: 543 LHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELR-RRR 601
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
C +I N ++ + + V +V + + E+ + TYN +M Y + G ++ E
Sbjct: 602 CSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCE 661
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
++L+ +KS+ +PD ++N +I +YG++ + ++F + S KP + T+N I +Y
Sbjct: 662 AILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSY 721
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
+ +A + + + A P+ TY I+ GYC
Sbjct: 722 VANLMFEEAIDLVRYLVAQGCKPNERTYNSILE--GYC 757
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 161/326 (49%), Gaps = 3/326 (0%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
A +++ ++ V + G+ A L M + G PD +N LI A + A +A
Sbjct: 219 ATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVAL 278
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
L + + G+ +P+++TYN L+ AC+Q+ N++ +F+E+ S PD++TYN ++
Sbjct: 279 DLLFEVRQSGL---RPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMV 335
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+G+ G +E E + + PD +T+N L+ ++ K DK+E + L+ + K
Sbjct: 336 SVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFK 395
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
T+N+MI YGK A ++ +M A+ TP +TY +I G D ++ A ++
Sbjct: 396 KNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKV 455
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
++++ G + +A++ AY G +A+ F+ GV PD Y ++ + +
Sbjct: 456 LEDMADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFAR 515
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFF 468
+ E + +L + M + P+ +
Sbjct: 516 SGETEKMLRLYRTMMNDNYRPDDDMY 541
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 174/358 (48%), Gaps = 15/358 (4%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
W + L+ F W+ R + + ++ V+G+ Q +A +F +R +G V+N
Sbjct: 170 WRRALDAFEWLA--RSTAPASRAVAVVLGVLGRARQDSIAEEVF--LRFAGEGATVQVFN 225
Query: 185 ALITAHLHTR--DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL 242
A++ + + D A+ L + +G++ P++V++N L+ A +++ + AL
Sbjct: 226 AMMGVYARSGRFDDARQLLDTM----HDRGID---PDLVSFNTLINARSKSGCLAAGVAL 278
Query: 243 --FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
E+ +S L PD+ TYN ++ A ++ +++ +V M +++C+PD+ T+N ++ +
Sbjct: 279 DLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVH 338
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
G+ ++ E++F L+ P T+NS++ + K K E+ +++ + +
Sbjct: 339 GRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNE 398
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
ITY +I MYG + A ++DE+ +G T M+++ EA + E+
Sbjct: 399 ITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLED 458
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ G+ P + L AY K + +K M +G+ P++ +L L+ F+ S
Sbjct: 459 MADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFARS 516
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/390 (20%), Positives = 170/390 (43%), Gaps = 42/390 (10%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ E G W Q + + +++ D I++ LI + G A +F M
Sbjct: 751 IIIEAYGNIKLWQQAEILVKGLRQASGI--DRRIWNALIHAYAESGLYEKARAVFDNMIK 808
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
+G P N ++ A L + L +G Q M K + T ++L A A+A
Sbjct: 809 TGPLPTVDSVNGMMRA-LIVDGRLDELYVVVGELQDMD----FKISKSTVLLMLDAFAKA 863
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+V +V ++ + + P+++ Y + + +++E +++ M+ KPD+ F
Sbjct: 864 GDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGAGFKPDLSIF 923
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY------------------ 335
N L++ Y FD+ QV++S++ + +P T+N++I+ Y
Sbjct: 924 NSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEGFTLLNEMGK 983
Query: 336 -----------------GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
KA L+ +A+ +F++M + Y + Y ++ +Y N S+
Sbjct: 984 RGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSK 1043
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A + + + G + ++T++ ++ +Y G P EA+ + + + + + Y ++
Sbjct: 1044 AENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLKSSSLEVSTLPYSTVFD 1103
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
AY K +L K L M+++G+ P+ + +
Sbjct: 1104 AYLKNGDYDLGIKKLLEMKRDGVEPDHQVW 1133
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 128/305 (41%), Gaps = 23/305 (7%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKA---- 199
D Y+ +++V G+ G+ A LF E+ G PD YN+L+ A + K
Sbjct: 327 DLWTYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTC 386
Query: 200 --LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
L KA G+ K N +TYN ++ + +D L+ E+ PD T
Sbjct: 387 EELVKA-GF----------KKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVT 435
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y ++D+ GK I E VL M KP ++ F+ LI +Y K E+ F ++
Sbjct: 436 YTVMIDSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMI 495
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
S KP + M+ + ++ K +++ M Y P Y+ ++ D
Sbjct: 496 ASGVKPDRLAYLVMLDVFARSGETEKMLRLYRTMMNDNYRPDDDMYQVLLVALAKEDKCE 555
Query: 378 RAREIFDELSKLGKDMKVSTLNAML-EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
EI ++ L + M + ++ +L +A C+ ++ L + + G PD+ + +
Sbjct: 556 EIEEIIQDMELLCQ-MSLGVISTILIKARCV----SQGGKLLKKACLQGYKPDAKSLWSI 610
Query: 437 YKAYT 441
AY
Sbjct: 611 MNAYV 615
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 129/316 (40%), Gaps = 22/316 (6%)
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA-RNVDQVNALFKELHESILAP 253
D A+A + + + G + + + L R+ A A R V V + + +A
Sbjct: 149 DGARATPDEVAFVVRAVGESSWRRALDAFEWLARSTAPASRAVAVVLGVLGRARQDSIAE 208
Query: 254 DIY-----------TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
+++ +N +M Y ++G + +L M PD+++FN LI++ K
Sbjct: 209 EVFLRFAGEGATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSK 268
Query: 303 RQ------AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
A D + +V +S + +P + T+N++I ++ A VF++M A +
Sbjct: 269 SGCLAAGVALDLLFEVRQSGL----RPDVITYNTLISACSQSSNLEDAVTVFEEMIASEC 324
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
P TY +++++G C A +F EL + G T N++L A+ G + +
Sbjct: 325 RPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEH 384
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
E G + TY + Y K +L L M G P+ + +++
Sbjct: 385 TCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLG 444
Query: 477 SSLAGSQSGSAKTDLT 492
+++G D+
Sbjct: 445 KMDKIAEAGKVLEDMA 460
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 142/338 (42%), Gaps = 21/338 (6%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY---NALITAHLHTRDKAKALAKALGYF 207
++ K G M +++ M+ +G P+ +Y +L+ H RD +A+ G
Sbjct: 856 MLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEG-- 913
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
G KP++ +N LL A N D+ +++ + E+ L PD TYN ++ Y +
Sbjct: 914 ---AGF---KPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCR 967
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ +E ++L+ M P + ++ L+ + K + ++ +Q+F+ + +
Sbjct: 968 SLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSI 1027
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
++ M+ Y A KAE + M P+ T ++T YG A + + L
Sbjct: 1028 YHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENVLNSLK 1087
Query: 388 KLGKDMKVSTL--NAMLEAYCMNGLPTEADLLFENSHNM---GVTPDSSTYKLLYKAYTK 442
++VSTL + + +AY NG + DL + M GV PD + +A +
Sbjct: 1088 S--SSLEVSTLPYSTVFDAYLKNG---DYDLGIKKLLEMKRDGVEPDHQVWTCFIRAASL 1142
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLA 480
LLK ++ G R E + S +A
Sbjct: 1143 CEQTADAILLLKSLQDCGFDLPIRLLTERTPSLLSEIA 1180
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/343 (19%), Positives = 134/343 (39%), Gaps = 26/343 (7%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y LI + + A +F +M+ G ++Y ++I+ + LG+
Sbjct: 677 LYEHLITCLVEAELFSEACQVFCDMQFIGIEASKNIYESIISTYCK-----------LGF 725
Query: 207 FQKMKG-MERCKPNIVTYNIL------LRACAQARNVDQVNALFKELHESILAPDIYTYN 259
+ G M+ + + NIL + A + Q L K L ++ D +N
Sbjct: 726 PETAHGLMDDALQSGIPLNILSCRVIIIEAYGNIKLWQQAEILVKGLRQAS-GIDRRIWN 784
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
++ AY ++G+ ++ +V M P + + N ++ + D++ V L
Sbjct: 785 ALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVGELQDM 844
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
K + T M+ + KA + ++ M A Y P+ Y + ++ + +
Sbjct: 845 DFKISKSTVLLMLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDV 904
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+ E+ G +S N++L Y G ++++ G+ PD TY L
Sbjct: 905 ELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVM 964
Query: 440 YTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGS 482
Y ++ E LL M + G+ P L+++ S LA S
Sbjct: 965 YCRSLRPEEGFTLLNEMGKRGLTPK-------LQSYKSLLAAS 1000
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 163/341 (47%), Gaps = 16/341 (4%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L++ R M+ +R AD YS +I + + G A+ LF EM G + YN+L+
Sbjct: 203 LDLLRKME-ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 261
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
KA + M E PN++T+N+LL + + + N L+KE+
Sbjct: 262 GLC----KAGKWNDGALLLKDMVSRE-IVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 316
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
++P+I TYN +MD Y + E ++L M N+C PDI+TF LI Y + D
Sbjct: 317 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDD 376
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINY---GKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+VF+++ T++ ++ + GK +L AE +FQ+M + P +TY
Sbjct: 377 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL---AEELFQEMVSHGVLPDVMTYG- 432
Query: 366 IITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
I + G CDN + +A EIF++L K D+ + ++E C G +A LF +
Sbjct: 433 -ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 491
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
GV P+ TY ++ K LL++ME++G PN
Sbjct: 492 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 532
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 151/307 (49%), Gaps = 9/307 (2%)
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
+T A + ++ G PD + +N LI L K +++A+ +M C+P+
Sbjct: 128 KTCFAYSVLGKVMKLGYEPDTTTFNTLIKG-LFLEGK---VSEAVVLVDRMV-ENGCQPD 182
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+VTYN ++ ++ + L +++ E + D++TY+ ++D+ ++G I S+
Sbjct: 183 VVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 242
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
M++ K ++T+N L+ K ++ + K ++ + P + TFN ++ + K
Sbjct: 243 EMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEG 302
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVST 397
+A ++++M +P+ ITY + M GYC + +S A + D + + + T
Sbjct: 303 KLQEANELYKEMITRGISPNIITYNTL--MDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 360
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
++++ YCM + +F N G+ ++ TY +L + + ++ +L ++L + M
Sbjct: 361 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 420
Query: 458 QNGIVPN 464
+G++P+
Sbjct: 421 SHGVLPD 427
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 119/262 (45%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+P+ T+N L++ V + L + E+ PD+ TYN +++ ++G
Sbjct: 145 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 204
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+L +M+ K D+ T++ +IDS + D +FK + K ++ T+NS++
Sbjct: 205 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 264
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
KA + + M + + P+ IT+ ++ ++ + A E++ E+ G +
Sbjct: 265 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 324
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
T N +++ YCM +EA+ + + +PD T+ L K Y + K+ + +
Sbjct: 325 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 384
Query: 457 EQNGIVPNKRFFLEALETFSSS 478
+ G+V N + ++ F S
Sbjct: 385 SKRGLVANAVTYSILVQGFCQS 406
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 153/337 (45%), Gaps = 13/337 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L K+ KW + + M R + + ++ L+ V K+G+ + A L+ EM
Sbjct: 259 LVRGLCKAGKWNDGALLLKDMV-SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 317
Query: 175 GCRPDPSVYNALITAH-LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G P+ YN L+ + + R L++A M +C P+IVT+ L++
Sbjct: 318 GISPNIITYNTLMDGYCMQNR-----LSEANNMLDLMV-RNKCSPDIVTFTSLIKGYCMV 371
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ VD +F+ + + L + TY+ ++ + ++G IK E + M S+ PD++T+
Sbjct: 372 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 431
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+L+D +K ++F+ L SK + + ++I K A +F +
Sbjct: 432 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 491
Query: 354 MKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P+ +TY +I+ G C ++S A + ++ + G T N ++ A+ +G
Sbjct: 492 KGVKPNVMTYTVMIS--GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 549
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
T + L E + G + D+S+ K++ A MK L
Sbjct: 550 TASAKLIEEMKSCGFSADASSIKMVIDMLLSA-MKRL 585
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 146/337 (43%), Gaps = 2/337 (0%)
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
F + K W + + I L + K L M GC P+ N L+
Sbjct: 113 FGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLC 172
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
+ + +AL L + G C PN+VTYN ++ +A+ VD+ + + + + +
Sbjct: 173 NEKRVEEALE--LLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGV 230
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
D+ TY+ ++D K + E VL M KPD++T+N +ID K QA D+ E
Sbjct: 231 KLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEG 290
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
V + ++ KP + T+N++I KA+ +A+ V Q M P TY C+I Y
Sbjct: 291 VLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYL 350
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+E+ G D V T + +L+ C NG TEA +F G+ P+ +
Sbjct: 351 STGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVT 410
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
Y +L Y + LL M NGI PN F
Sbjct: 411 IYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIF 447
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 146/327 (44%), Gaps = 9/327 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS +I + K A + M + G +PD YN +I KA+A+ +A
Sbjct: 233 DVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLC----KAQAVDRA 288
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
G Q M KG+ KP++VTYN ++ +A+ VD+ + + + + + + PDI TYN +
Sbjct: 289 EGVLQHMIDKGV---KPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCL 345
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ Y G KE+ L M + PD++T++LL+D K + ++F ++
Sbjct: 346 IHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGI 405
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
KP + + ++ Y + M A +P+ + ++ Y + A
Sbjct: 406 KPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMH 465
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
IF +S+ G V T +++A C G +A L F N GVTP+S + L
Sbjct: 466 IFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLC 525
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFF 468
+ E ++L M G+ PN FF
Sbjct: 526 TVDRWEKAEELFFEMWDQGVRPNVVFF 552
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 148/340 (43%), Gaps = 16/340 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI G+ + + EM G PD Y +L+ +L K A+
Sbjct: 338 DIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTY-SLLLDYLCKNGKCTE-ARK 395
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ Y KG+ KPN+ Y ILL A + + L + + ++P+ Y +N V+
Sbjct: 396 IFYCMIRKGI---KPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLC 452
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
AY K MI E + SRM + PD++T+ +LID+ K D F +++ P
Sbjct: 453 AYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTP 512
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRARE 381
FNS++ KAE +F +M P+ + + I M C+ V A+
Sbjct: 513 NSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTI--MCNLCNEGQVMVAQR 570
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ D + ++G V + N ++ +C+ G EA L + ++G+ PD +Y L + Y
Sbjct: 571 LIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYC 630
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
K + L + M + G+ P T+S+ L G
Sbjct: 631 KTGRIDNAYCLFREMLRKGVTPGA-------VTYSTILQG 663
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 145/347 (41%), Gaps = 13/347 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ +I + K A + M + G +PD YN +I KA+A+ +A
Sbjct: 268 DVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLC----KAQAVDRA 323
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
G Q M + KP+I TYN L+ +V +E++ L PD+ TY+ ++D
Sbjct: 324 DGVLQHMIDKD-VKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLD 382
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
KNG E + M KP++ + +L+ Y R A + + ++ + P
Sbjct: 383 YLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISP 442
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
FN ++ Y K + +A ++F +M+ +P +TY +I V A F
Sbjct: 443 NNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKF 502
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+++ G N+++ C +A+ LF + GV P+ + +
Sbjct: 503 NQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNE 562
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTD 490
+ Q+L+ ME+ G+ PN + ++L G + +TD
Sbjct: 563 GQVMVAQRLIDSMERVGVRPNVISY--------NTLIGGHCLAGRTD 601
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 140/318 (44%), Gaps = 5/318 (1%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
I++ ++ KK AM +FS M G PD Y LI A K + A+
Sbjct: 446 IFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALC----KLGRVDDAVLK 501
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F +M + PN V +N L+ ++ LF E+ + + P++ +N +M
Sbjct: 502 FNQMIN-DGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLC 560
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
G + + ++ M+ +P++I++N LI + D+ Q+ ++ KP L
Sbjct: 561 NEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLI 620
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
++++++ Y K A +F++M TP +TY I+ + S A+E++ +
Sbjct: 621 SYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNM 680
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
K G+ + T N +L C EA +F++ + + P+ T+ ++ K K
Sbjct: 681 IKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRK 740
Query: 447 ELVQKLLKRMEQNGIVPN 464
+ L + +G+VPN
Sbjct: 741 KDAMDLFASIPSHGLVPN 758
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 148/340 (43%), Gaps = 10/340 (2%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ + +F M Q D Y LI + K G+ A+ F++M N G P+ V+N+L
Sbjct: 462 EAMHIFSRMS-QHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSL 520
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
+ L T D+ + KA F +M + +PN+V +N ++ V L +
Sbjct: 521 VYG-LCTVDRWE---KAEELFFEMWD-QGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSM 575
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
+ P++ +YN ++ + G E +L M S KPD+I+++ L+ Y K
Sbjct: 576 ERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRI 635
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
D +F+ ++ P T+++++ R +A+ ++ M TY I
Sbjct: 636 DNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNII 695
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMK--VSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
+ + V A +IF L KD++ + T M++ G +A LF + +
Sbjct: 696 LNGLCKTNCVDEAFKIFQSLCS--KDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSH 753
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G+ P+ TY ++ K + + + L ME++G P+
Sbjct: 754 GLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPD 793
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 132/324 (40%), Gaps = 53/324 (16%)
Query: 123 DKWLQCLEVF--RWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
D+W + E+F W Q R + ++ ++ + +GQ +A L M G RP+
Sbjct: 528 DRWEKAEELFFEMWDQGVRPNVV---FFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNV 584
Query: 181 SVYNALITAH-LHTR-DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
YN LI H L R D+A L + G+ KP++++Y+ LLR + +D
Sbjct: 585 ISYNTLIGGHCLAGRTDEAAQLLDVMVSV----GL---KPDLISYDTLLRGYCKTGRIDN 637
Query: 239 VNALFKELHESILAP-----------------------------------DIYTYNGVMD 263
LF+E+ + P DIYTYN +++
Sbjct: 638 AYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILN 697
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY--GKRQAFDKMEQVFKSLMHSKE 321
K + E + + S +P+IITF ++ID G R+ D M+ +F S+
Sbjct: 698 GLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKK-DAMD-LFASIPSHGL 755
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P + T+ M+ N + L + + +F M TP + II + RA
Sbjct: 756 VPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGA 815
Query: 382 IFDELSKLGKDMKVSTLNAMLEAY 405
++ ++ ++ ST + ++ +
Sbjct: 816 YLSKIDEMNFSLEASTTSLLISLF 839
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/250 (19%), Positives = 101/250 (40%), Gaps = 16/250 (6%)
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME---SVLSRMK-- 282
RA + + +D LF EL + +N +++ + E S+ +RM
Sbjct: 22 RARSGSLGIDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARA 81
Query: 283 -SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA-RL 340
SN+ +PD+ T+++L + + + F ++ + + N ++ A R+
Sbjct: 82 CSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRV 141
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM------K 394
+ + ++M P+ ++ C + G C N R E + L + +D
Sbjct: 142 DEAMDILLRRMPEFGCMPNVVS--CNTLLKGLC-NEKRVEEALELLHTMAEDGGGNCTPN 198
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
V T N +++ C A+ + ++ + GV D TY + KA + + +L+
Sbjct: 199 VVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQ 258
Query: 455 RMEQNGIVPN 464
M G+ P+
Sbjct: 259 HMIDKGVKPD 268
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 168/344 (48%), Gaps = 12/344 (3%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
W + L + M+K + D Y+ LI+ ++ + A +F EMR +G PD N
Sbjct: 228 WKEVLALVDSMRKDGIPL-DRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLN 286
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
+L+ + KA+ +A+G ++M+ C P++VTYN L+ + + +++ L +
Sbjct: 287 SLLDVY----GKARRYDEAIGVLKEME-QGGCPPSVVTYNSLISSYVKDGLLEEATQLKE 341
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
E+ + PD+ TY ++ + G I + M N CKP++ T+N LI +G R
Sbjct: 342 EMEVKGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRG 401
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
F +M VF + + P + T+N+++ +G+ L + VF++M Y P TY
Sbjct: 402 KFPEMMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYV 461
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
+I+ Y C +A EI+ + + G +ST NA+L A G +A+ LF N+
Sbjct: 462 SLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENL 521
Query: 425 GVTPDSSTYKLLYKAYTKA----NMKELVQKLL-KRME-QNGIV 462
PD +Y L AY A MK L + + +R+E NG+V
Sbjct: 522 DSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLV 565
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 145/321 (45%), Gaps = 4/321 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI+ + + + R A+ +F M +G P YN ++ H++++ A +
Sbjct: 175 DASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVL--HVYSK-IAVPWKEV 231
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L M+ + + TYN L+ C + + +F E+ + PD T N ++D
Sbjct: 232 LALVDSMR-KDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLD 290
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
YGK E VL M+ C P ++T+N LI SY K ++ Q+ + + +P
Sbjct: 291 VYGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEP 350
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T+ +++ +A A + +M P+ TY +I ++G +F
Sbjct: 351 DVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVF 410
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
DE+ G V T N +L + NGL TE +F+ G P+ TY L +Y++
Sbjct: 411 DEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRC 470
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+ + ++ KRM + GI P+
Sbjct: 471 GLFDQAMEIYKRMIEAGIHPD 491
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 160/404 (39%), Gaps = 75/404 (18%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ L++ + + G+ A+ ++EM +GC+P+ YNALI H R K +
Sbjct: 351 DVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLH-GVRGK---FPEM 406
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH---------------- 247
+ F +++ P++VT+N LL Q +V+ +FKE+
Sbjct: 407 MIVFDEIRSAGFV-PDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLIS 465
Query: 248 -------------------ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
E+ + PDI TYN V+ A + G ++ E + + M++ +P
Sbjct: 466 SYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRP 525
Query: 289 DIITFNLLIDSYGKRQAFDKM-----------------------------------EQVF 313
D ++++ L+ +Y + DKM E+ F
Sbjct: 526 DELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAF 585
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
L + + N+MI YGK + K E + M S TY ++ MY
Sbjct: 586 LELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRL 645
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ + I E+ + N M+ AY G EA LF G+ PD TY
Sbjct: 646 GDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTY 705
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
+ K+Y +M E L++ M +G PN+R + L+ + S
Sbjct: 706 NIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCS 749
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 129/295 (43%), Gaps = 36/295 (12%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK---------- 267
P+ Y L+ A ++A A+F+ + + + P + TYN V+ Y K
Sbjct: 174 PDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLA 233
Query: 268 -----------------NGMI---------KEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
N +I KE V M++ +PD +T N L+D YG
Sbjct: 234 LVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYG 293
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
K + +D+ V K + P++ T+NS+I +Y K L +A + ++M P I
Sbjct: 294 KARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVI 353
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
TY +++ + A ++E+ + G + T NA+++ + + G E ++F+
Sbjct: 354 TYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEI 413
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+ G PD T+ L + + + V + K M+++G VP + ++ + ++S
Sbjct: 414 RSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYS 468
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 135/294 (45%), Gaps = 33/294 (11%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
Q +E+++ M + + D Y+ +++ + + G+ A LF+EM N RPD Y++L
Sbjct: 475 QAMEIYKRMIEAGIH-PDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSL 533
Query: 187 ITAHLHTR--DKAKALAKALGYFQKMK---GM--------------------------ER 215
+ A+ + + DK K+L++ + Y ++++ G+ R
Sbjct: 534 LHAYANAKKLDKMKSLSEDI-YAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRR 592
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
C +I N ++ + V +V + + ES + TYN +M Y + G ++ E
Sbjct: 593 CSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCE 652
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
++L+ +KS++ +PD ++N +I +YG++ + ++F + S P + T+N + +Y
Sbjct: 653 NILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTYNIFVKSY 712
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
+ +A + + M P+ TY I+ Y ++ + L +L
Sbjct: 713 VANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCSHGRIADGKSFISNLPEL 766
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 182/409 (44%), Gaps = 45/409 (11%)
Query: 94 EPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIA 153
E L R +N+ ++ + L + L K+ +V + + ++ + D +Y+ I
Sbjct: 509 EALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNL-LPDAVVYNVFIN 567
Query: 154 VMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGM 213
+ G+++ A EM+++G +PD YN +I A AKAL + + GM
Sbjct: 568 CLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKAL-------KLLNGM 620
Query: 214 ER--CKPNIVTYNIL-----------------------------------LRACAQARNV 236
+R KPN++TY+ L L+AC+Q R
Sbjct: 621 KRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRS 680
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
D + + + + + L DI YN ++ NGM ++ VL M PD ITFN L
Sbjct: 681 DLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNAL 740
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
I + K D + +++ P + TFN+++ A G+++ V +M
Sbjct: 741 ILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGI 800
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
PS +TY+ ++T YG N A ++ E+ G KVST NA++ + G+ ++A
Sbjct: 801 EPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKE 860
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
LF N GV P S TY +L ++K V+K LK M++ G P+K
Sbjct: 861 LFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSK 909
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 145/322 (45%), Gaps = 14/322 (4%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVT 222
A+ ++ EM G + + ++L+ K + KA F++M ER + V
Sbjct: 473 ALDVYHEMLCEGVEVNKFIVDSLVNG----LKKNGKIEKAEALFREMN--ERGVLLDHVN 526
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y L+ + N+ + +EL E L PD YN ++ G KE ES L M+
Sbjct: 527 YTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQ 586
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
S KPD +T+N +I + + K ++ + S KP L T++++I+ +A
Sbjct: 587 STGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVE 646
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
KA+Y+ +M++ ++P+ +T+ ++ EI + + G ++ N ++
Sbjct: 647 KAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLV 706
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
C NG+ +A ++ E G+ PD+ T+ L + K+ + +M +GI
Sbjct: 707 RVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGIS 766
Query: 463 PNKRFFLEALETFSSSLAGSQS 484
PN + TF++ L G +S
Sbjct: 767 PN-------VATFNTLLGGLES 781
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 137/321 (42%), Gaps = 5/321 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ I ++ A L+ EM G PD +AL+ K ++A F
Sbjct: 247 YTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLC----KDGRFSEAYALF 302
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M+ + PN VTY +L+ A+A+ ++ +L E+ + D+ Y +MD K
Sbjct: 303 REMEKIG-AAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCK 361
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G I E + + S+ P+ +T+ +LID+ K D EQV + P + T
Sbjct: 362 EGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVT 421
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
F+S+I K GKA ++M P+ +TY +I C A +++ E+
Sbjct: 422 FSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEML 481
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G ++ +++++ NG +A+ LF + GV D Y L K
Sbjct: 482 CEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLP 541
Query: 448 LVQKLLKRMEQNGIVPNKRFF 468
K+ + + + ++P+ +
Sbjct: 542 AAFKVGQELTEKNLLPDAVVY 562
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 141/317 (44%), Gaps = 14/317 (4%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALGYFQKMKGMERCKPNIVTYN 224
L +EM G D N ++ D+A ALA+ + + G++ +V +N
Sbjct: 124 LLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLD-----VVGWN 178
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
L+ + +++ A+ + + + D+ YN ++ + G + ++ MK +
Sbjct: 179 SLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRD 238
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
+P+++T+ + I Y +R A D +++ ++ P + T ++++ K +A
Sbjct: 239 GVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEA 298
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
+F++M + P+ +TY +I + + + E+ G M + A+++
Sbjct: 299 YALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDW 358
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
C G EA +F ++ + TP+ TY +L A KA + +++L ME+ I PN
Sbjct: 359 LCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPN 418
Query: 465 KRFFLEALETFSSSLAG 481
+ TFSS + G
Sbjct: 419 -------VVTFSSIING 428
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 129/261 (49%), Gaps = 5/261 (1%)
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
++ L + + M N+G D +VYN L+ + KA+ ++M G P+
Sbjct: 679 RSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMV----VLEEMSG-RGIAPD 733
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+T+N L+ ++ ++D + + ++ ++P++ T+N ++ G I E + VL+
Sbjct: 734 TITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLN 793
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
MK +P +T+++L+ YGK+ + +++ ++ P + T+N++I ++ K
Sbjct: 794 EMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVG 853
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLN 399
+ +A+ +F +M P+ TY+ +++ + N + R+ ++ + G TL+
Sbjct: 854 MMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLS 913
Query: 400 AMLEAYCMNGLPTEADLLFEN 420
++ A+ G+ EA L +N
Sbjct: 914 SISRAFSKPGMSWEARRLLKN 934
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 132/318 (41%), Gaps = 10/318 (3%)
Query: 157 KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALGYFQKMKGME 214
K G A + M+ G D YN+L+ D A+ + + K G+E
Sbjct: 186 KVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTM----KRDGVE 241
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
PN+VTY + + + VD +L++E+ + PD+ T + ++ K+G E
Sbjct: 242 ---PNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEA 298
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
++ M+ P+ +T+ +LID+ K Q ++ + ++ L + +++
Sbjct: 299 YALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDW 358
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
K +A+ +F+ + +TP+ +TY +I NV A ++ E+ +
Sbjct: 359 LCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPN 418
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
V T ++++ G +A G+ P+ TY + K +E +
Sbjct: 419 VVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYH 478
Query: 455 RMEQNGIVPNKRFFLEAL 472
M G+ NK F +++L
Sbjct: 479 EMLCEGVEVNK-FIVDSL 495
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 92/233 (39%), Gaps = 3/233 (1%)
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
D +YN VM + + G + E++L+ M D +T N ++ + D+ +
Sbjct: 102 DTVSYNVVMSGFSEQGGLAP-EALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160
Query: 314 KSLMHSKEKPTLPT--FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+ ++ L +NS++ Y K A V ++M A + Y ++
Sbjct: 161 EVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLC 220
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
V AR++ D + + G + V T + YC +A L+E GV PD
Sbjct: 221 RAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVV 280
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQS 484
T L K L + ME+ G PN + ++T + + G++S
Sbjct: 281 TLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNES 333
>gi|296083087|emb|CBI22491.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 165/392 (42%), Gaps = 75/392 (19%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ L++ K G+ + A+ +F EMRN GC+P+ +NALI H R K + K
Sbjct: 103 DVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMH-GNRGKFTEMMKV 161
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQ------------------------------- 232
F+ +K + C P+IVT+N LL Q
Sbjct: 162 ---FEDIKTFQ-CSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLIS 217
Query: 233 ----ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
+ DQ A++K + E+ + PD+ +YN V+ A + G+ K+ E VL+ MK +CKP
Sbjct: 218 SYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKP 277
Query: 289 DIITFNLLIDSYGKRQAFDKM-----------------------------------EQVF 313
+ +T+ L+ +Y + ++M E+ F
Sbjct: 278 NELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAF 337
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
L P + T N+M+ YG+ ++ KA + M +TPS TY ++ MY
Sbjct: 338 LELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRS 397
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
N R+ EI E+ G + + N ++ AYC NG +A + G PD TY
Sbjct: 398 ANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITY 457
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+Y +M ++ M ++G PN+
Sbjct: 458 NTFIASYAADSMFVEAIDVVCYMIKHGCKPNQ 489
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 119/233 (51%), Gaps = 5/233 (2%)
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
L ++ E + PD++TY ++ + K G K + M++ CKP+I TFN LI +G
Sbjct: 91 LKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHG 150
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
R F +M +VF+ + + P + T+N+++ +G+ + + VF++M + P
Sbjct: 151 NRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERD 210
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
T+ +I+ Y C + +A ++ + + G + +S+ NA+L A GL +++ +
Sbjct: 211 TFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEM 270
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ--NGIVPNKRFFLEAL 472
+ P+ TY L AY AN KE ++++ E+ +GI+ + L+ L
Sbjct: 271 KDGRCKPNELTYCSLLHAY--ANGKE-IERMCALAEEIYSGIIEPRAVLLKTL 320
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 140/325 (43%), Gaps = 41/325 (12%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VF+ M K+ ++ + ++ LI+ + G AM ++ M +G PD S YNA++ A
Sbjct: 196 VFKEM-KRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAA- 253
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
L K K L +MK RCKPN +TY LL A A + ++++ AL +E++ I
Sbjct: 254 LARGGLWKQSEKVLA---EMKD-GRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGI 309
Query: 251 L-----------------------------------APDIYTYNGVMDAYGKNGMIKEME 275
+ +PDI T N ++ YG+ M+ +
Sbjct: 310 IEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKAN 369
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
+L MK P + T+N L+ Y + F++ E++ + ++ +P + ++N++I Y
Sbjct: 370 EILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAY 429
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
+ A V +M P ITY I Y A ++ + K G
Sbjct: 430 CRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQ 489
Query: 396 STLNAMLEAYCMNGLPTEADLLFEN 420
ST N++++ YC EA + N
Sbjct: 490 STYNSIVDWYCKLNRRDEASMFVNN 514
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 128/318 (40%), Gaps = 70/318 (22%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
KP++ TY LL +A +F+E+ P+I T+N ++ +G G EM
Sbjct: 101 KPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMK 160
Query: 277 VLSRMKSNQCKPDII-----------------------------------TFNLLIDSYG 301
V +K+ QC PDI+ TFN LI SY
Sbjct: 161 VFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYS 220
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
+ +FD+ V+K ++ + P L ++N+++ + L ++E V +M + P+ +
Sbjct: 221 RCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNEL 280
Query: 362 TYECIITMYGYCDNVSR----AREI-------------------------------FDEL 386
TY ++ Y + R A EI F EL
Sbjct: 281 TYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLEL 340
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
+ G ++TLNAM+ Y + +A+ + + G TP +TY L Y+++
Sbjct: 341 RQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANF 400
Query: 447 ELVQKLLKRMEQNGIVPN 464
E +++L+ + GI P+
Sbjct: 401 ERSEEILREILAKGIRPD 418
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 88/180 (48%), Gaps = 5/180 (2%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
+QR + D + ++++ G++ A + M+ G P + YN+L+ ++++R
Sbjct: 341 RQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLM--YMYSRSA 398
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
++ + KG+ +P+I++YN ++ A + + + + E+ ES APDI
Sbjct: 399 NFERSEEILREILAKGI---RPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDII 455
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TYN + +Y + M E V+ M + CKP+ T+N ++D Y K D+ +L
Sbjct: 456 TYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNL 515
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 178/394 (45%), Gaps = 52/394 (13%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L E K D W + VF M QR + D +S ++ V + G+ A+ F +M+
Sbjct: 335 MLVESCRKEDVW-EAERVFNEML-QRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKG 392
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKG--MER-CKPNIVTYNILLRAC 230
G PD +Y LI + D + AL KM+ +ER C ++VTYN LL
Sbjct: 393 VGLVPDTVIYTILINGYCRNDDVSGAL--------KMRNEMVERGCVMDVVTYNTLLNGL 444
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
+ + +D + LFKE+ E + PD YT ++ Y K+G + + S+ M KPD+
Sbjct: 445 CRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDV 504
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE----------------------------- 321
+T+N L+D + K +K ++++ ++ S+E
Sbjct: 505 VTYNTLMDGFCKVGEMEKAKELWYDMI-SREIFPSYISFSILINGFCSLGLVSEAFRLWD 563
Query: 322 -------KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
KPTL T N++I Y +A KA M + P ITY +I + +
Sbjct: 564 EMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEE 623
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
N RA + + + + G + T NA+L + +G EA+++ + G+ PD STY
Sbjct: 624 NFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYT 683
Query: 435 LLYKAY-TKANMKELVQKLLKRMEQNGIVPNKRF 467
L Y +K NMKE ++ M Q G VP+ +F
Sbjct: 684 SLINGYVSKDNMKEAF-RVHDEMLQRGFVPDDKF 716
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 146/322 (45%), Gaps = 17/322 (5%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E F+ ++K R + + L+ + K G LA ++ + SG + N ++ A
Sbjct: 175 EAFQLLRK-RGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNA 233
Query: 190 HLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
K L Y +M KG+ ++VTYN L+ A + V + L +
Sbjct: 234 LC----KDGKLDNVGVYLSEMEEKGV---YADLVTYNTLVNAYCRRGLVSEAFGLVDCMA 286
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN-LLIDSYGKRQAF 306
L P ++TYN +++ K G + + VL M P+ TFN +L++S K +
Sbjct: 287 GKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVW 346
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ E+VF ++ P L +F+S++ + + G+A F+KM + P + Y +
Sbjct: 347 EA-ERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTIL 405
Query: 367 ITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
I GYC D+VS A ++ +E+ + G M V T N +L C + +AD LF+
Sbjct: 406 IN--GYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVER 463
Query: 425 GVTPDSSTYKLLYKAYTK-ANM 445
GV PD T L Y K NM
Sbjct: 464 GVFPDFYTLTTLIHGYCKDGNM 485
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 120/278 (43%), Gaps = 35/278 (12%)
Query: 220 IVTYNILLRACAQAR-------------------NVDQVNAL----------------FK 244
+V +++L+R QAR +++ NAL ++
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
+ +S ++YT N +++A K+G + + LS M+ D++T+N L+++Y +R
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
+ + + KP L T+N++I K +A+ V +M + P+ T+
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
++ ++V A +F+E+ + G + + ++++ + NG A FE +
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV 393
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
G+ PD+ Y +L Y + + K+ M + G V
Sbjct: 394 GLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCV 431
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 72/182 (39%), Gaps = 6/182 (3%)
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM---IINYGKARLQGKAEY 346
++ F+LLI +Y + + + + F+ L ++ N++ I+ G L K
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
F K + + + G DNV E+ + G + T N ++ AYC
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVY---LSEMEEKGVYADLVTYNTLVNAYC 270
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
GL +EA L + G+ P TY L K E +++L M G+ PN
Sbjct: 271 RRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAA 330
Query: 467 FF 468
F
Sbjct: 331 TF 332
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 157/343 (45%), Gaps = 11/343 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI G+ R A+ +F +M GC+P YN ++ + K
Sbjct: 32 DVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVY---GKMGMPWNKI 88
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
G F+ MK P+ TYN L+ C + ++ A+F+++ PD TYN ++D
Sbjct: 89 TGLFEGMKN-AGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLD 147
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
YGK+ IKE VL M+ N C P I+T+N LI +Y + ++ ++ ++ K
Sbjct: 148 VYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKL 207
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T+ +M+ + + A VF++M P+ T+ +I M+G + ++F
Sbjct: 208 DVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVF 267
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+E+ + T N +L + NG+ +E +F+ +G P+ TY L AY++
Sbjct: 268 EEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRC 327
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGS 486
+ + KRM GI P+ L T+++ LA G
Sbjct: 328 GSFDQAMAMYKRMLDTGITPD-------LSTYNAVLAALARGG 363
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 174/408 (42%), Gaps = 75/408 (18%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+R D Y+ +++ + G+ AM +F EMR +GC+P+ +NALI H R K
Sbjct: 202 ERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMH-GNRGK- 259
Query: 198 KALAKALGYFQKMKGMERCKPNIVT----------------------------------- 222
A+ + F+++K + C P+IVT
Sbjct: 260 --FAEMMKVFEEIK-ICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDT 316
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
YN L+ A ++ + DQ A++K + ++ + PD+ TYN V+ A + G+ ++ E +L+ M+
Sbjct: 317 YNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQ 376
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKM--------------------------------- 309
CKP+ +T L+ +Y + +M
Sbjct: 377 DGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLL 436
Query: 310 --EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
E+ F L P L T N+MI YG+ ++ K + M +TPS TY ++
Sbjct: 437 EAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLM 496
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
M+ +N R+ E+ E+ G + + N ++ AYC NG EA +F G+
Sbjct: 497 YMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLI 556
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
PD TY +Y +M E ++ M ++G PN+ + ++ +
Sbjct: 557 PDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGY 604
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 169/400 (42%), Gaps = 68/400 (17%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VF M K ++ D Y+ L+ V GK + + A+ + EM +GC P YN+LI+A+
Sbjct: 126 VFEDM-KSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAY 184
Query: 191 LHTRDKAKAL-------------------------------AKALGYFQKMKGMERCKPN 219
+A+ A+ F++M+ CKPN
Sbjct: 185 ARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMR-TAGCKPN 243
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
I T+N L++ ++ +F+E+ PDI T+N ++ +G+NGM E+ V
Sbjct: 244 ICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFK 303
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
MK P+ T+N LI +Y + +FD+ ++K ++ + P L T+N+++ +
Sbjct: 304 EMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGG 363
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGY--------------------------- 372
L ++E + +M P+ +T+ ++ Y
Sbjct: 364 LWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLK 423
Query: 373 --------CDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
CD + A F EL + G +STLNAM+ Y + T+ + +
Sbjct: 424 TLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKES 483
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G TP +TY L ++++ E +++LK + GI P+
Sbjct: 484 GFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPD 523
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 115/241 (47%), Gaps = 1/241 (0%)
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
+++ + V +L LH+ PD+Y Y ++ A NG +E V +M+
Sbjct: 3 VIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62
Query: 285 QCKPDIITFNLLIDSYGKR-QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
CKP +IT+N++++ YGK ++K+ +F+ + ++ P T+N++I + L +
Sbjct: 63 GCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEE 122
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A VF+ M +M + P +TY ++ +YG + A E+ E+ G + T N+++
Sbjct: 123 AAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLIS 182
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
AY +GL EA L G+ D TY + + + E ++ + M G P
Sbjct: 183 AYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKP 242
Query: 464 N 464
N
Sbjct: 243 N 243
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 41/311 (13%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VF+ M K+ ++ + Y+ LI+ + G AM ++ M ++G PD S YNA++ A
Sbjct: 301 VFKEM-KRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAA- 358
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL-------- 242
L + K L Q GM CKPN +T+ LL A A + + ++ AL
Sbjct: 359 LARGGLWEQSEKILAEMQD--GM--CKPNELTHCSLLHAYANGKEIGRMLALAEEICSGV 414
Query: 243 ---------------------------FKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
F EL +PD+ T N ++ YG+ M+ +
Sbjct: 415 IEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTN 474
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
+L+ MK + P + T+N L+ + + + F++ E+V K ++ KP + ++N++I Y
Sbjct: 475 EILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAY 534
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
+ +A ++F +M P ITY + Y A ++ + K G
Sbjct: 535 CRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQ 594
Query: 396 STLNAMLEAYC 406
+T N++++ YC
Sbjct: 595 NTYNSVIDGYC 605
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 8/154 (5%)
Query: 330 SMIIN-YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE---IFDE 385
++IIN GK A + + + P Y +IT C + R RE +F +
Sbjct: 2 AVIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITA---CVSNGRYREAVMVFKK 58
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLP-TEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ + G + T N +L Y G+P + LFE N G+ PD TY L + +
Sbjct: 59 MEEEGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGS 118
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ E + + M+ G VP+K + L+ + S
Sbjct: 119 LYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKS 152
>gi|58013026|gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
Length = 1429
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 182/405 (44%), Gaps = 46/405 (11%)
Query: 102 KYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQT 161
+ V++ +++CF++ + +G+ + W + LEVF W+ + W+ + + + ++ V+G+ Q
Sbjct: 150 RLVQMTPTDYCFVV-KSVGQ-ESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQE 207
Query: 162 RLAMWLFSE----------------------------------MRNSGCRPDPSVYNALI 187
LA+ +F+ MR GC PD +N LI
Sbjct: 208 SLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLI 267
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
A L + LA L + G+ +P+ +TYN LL AC++ N+D +F+++
Sbjct: 268 NARLKSGGLTPNLAVELLDMVRNSGL---RPDAITYNTLLSACSRDSNLDGAVKVFEDME 324
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
PD++TYN ++ YG+ G+ E E + ++ PD +T+N L+ ++ + + +
Sbjct: 325 AHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTE 384
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK----YTPSFITY 363
K+++V++ + T+N++I YGK QG+ + Q MK P ITY
Sbjct: 385 KVKEVYQQMQKMGFGKDEMTYNTIIHMYGK---QGQLDLALQLYKDMKGLSGRNPDAITY 441
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+I G + A + E+ +G + T +A++ Y G EA+ F
Sbjct: 442 TVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLR 501
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G PD+ Y ++ + N L + M +G P+ +
Sbjct: 502 SGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLY 546
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 163/348 (46%), Gaps = 8/348 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ E GK W + V + +Q D ++ L++ + G A +F+ M
Sbjct: 758 IIEAYGKQKLWQKAESVVGNL-RQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRD 816
Query: 175 GCRPDPSVYNALITAH-LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G P P+V + I H L + + L + Q M G + K +I+ ++L A A+A
Sbjct: 817 G--PSPTVESINILLHALCVDGRLEELYVVVEELQDM-GFKISKSSIL---LMLDAFARA 870
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
N+ +V ++ + + P I Y +++ K +++ E ++S M+ K ++ +
Sbjct: 871 GNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIW 930
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N ++ Y + + K QV++ + + +P T+N++II Y + R + + Q+M
Sbjct: 931 NSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRN 990
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
+ P TY+ +I+ +G + +A ++F+EL G + S + M++ +G ++
Sbjct: 991 LGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSK 1050
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
A+ L + N G+ P +T LL +Y+ + + +K+L ++ +
Sbjct: 1051 AEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEV 1098
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 146/334 (43%), Gaps = 5/334 (1%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
+V + + ++ A + +Y+ +I GK+ + A + +R SG PD +N+L++A
Sbjct: 737 QVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSA 796
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ + +A F M + P + + NILL A ++++ + +EL +
Sbjct: 797 YA----QCGCYERARAIFNTMM-RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDM 851
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+ ++DA+ + G I E++ + S MK+ P I + ++I+ K +
Sbjct: 852 GFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA 911
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
E + + + K L +NSM+ Y K V+Q++ P TY +I M
Sbjct: 912 EIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIM 971
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
Y + ++ LG D K+ T +++ A+ +A+ LFE + G+ D
Sbjct: 972 YCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLD 1031
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
S Y + K + +KLL+ M+ GI P
Sbjct: 1032 RSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEP 1065
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 151/361 (41%), Gaps = 33/361 (9%)
Query: 140 WYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI----------TA 189
W + +Y L+ A +FS++R SGC SV +++ TA
Sbjct: 676 WCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETA 735
Query: 190 H----------------------LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
H + K K KA ++ R P++ T+N L+
Sbjct: 736 HQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRT-PDLKTWNSLM 794
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
A AQ ++ A+F + +P + + N ++ A +G ++E+ V+ ++ K
Sbjct: 795 SAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFK 854
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
+ L++D++ + ++++++ S+ + PT+ + MI K + AE +
Sbjct: 855 ISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIM 914
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
+M + + ++ MY ++ + +++ + + G + +T N ++ YC
Sbjct: 915 VSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCR 974
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
+ P E LL + N+G+ P TYK L A+ K E ++L + + G+ ++ F
Sbjct: 975 DRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSF 1034
Query: 468 F 468
+
Sbjct: 1035 Y 1035
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 139/323 (43%), Gaps = 38/323 (11%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
++VF M+ R D Y+ +I+V G+ G A LF E+ G PD YN+L+
Sbjct: 317 VKVFEDMEAHRCQ-PDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLY 375
Query: 189 AH-------------------------------LHTRDKAKALAKALGYFQKMKGMERCK 217
A +H K L AL ++ MKG+
Sbjct: 376 AFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRN 435
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+ +TY +L+ + +A + AL E+ + + P + TY+ ++ Y K G +E E
Sbjct: 436 PDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDT 495
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
S M + KPD + +++++D + K +++ ++ P+ + MI+ K
Sbjct: 496 FSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMK 555
Query: 338 ARLQGKAEYVFQKMTAM-KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
+ + M + P I+ + + G C +++ AR++ ++ G +++
Sbjct: 556 ENRSDDIQKTIRDMEELCGMNPLEISS---VLVKGECFDLA-ARQLKVAITN-GYELEND 610
Query: 397 TLNAMLEAYCMNGLPTEADLLFE 419
TL ++L +Y +G +EA L E
Sbjct: 611 TLLSILGSYSSSGRHSEAFELLE 633
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 134/316 (42%), Gaps = 7/316 (2%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
++S M+ +G P +Y +I K K + A +M+ K + +N +
Sbjct: 879 IYSSMKAAGYLPTIRLYRMMIELLC----KGKRVRDAEIMVSEMEEA-NFKVELAIWNSM 933
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
L+ + + +++ + E+ L PD TYN ++ Y ++ +E ++ +M++
Sbjct: 934 LKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGL 993
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
P + T+ LI ++GK++ ++ EQ+F+ L+ K +++M+ + KAE
Sbjct: 994 DPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEK 1053
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+ Q M P+ T ++ Y N A ++ L ++ +++++AY
Sbjct: 1054 LLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYL 1113
Query: 407 MN-GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+ + + L E G+ PD + +A + + K V LLK +E G
Sbjct: 1114 RSKDYNSGIERLLEMKKE-GLEPDHRIWTCFVRAASFSKEKIEVMLLLKALEDIGFDLPI 1172
Query: 466 RFFLEALETFSSSLAG 481
R E S + G
Sbjct: 1173 RLLAGRPELLVSEVDG 1188
>gi|334185431|ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g18110, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product [Arabidopsis thaliana]
gi|332642528|gb|AEE76049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1440
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 182/405 (44%), Gaps = 46/405 (11%)
Query: 102 KYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQT 161
+ V++ +++CF++ + +G+ + W + LEVF W+ + W+ + + + ++ V+G+ Q
Sbjct: 150 RLVQMTPTDYCFVV-KSVGQ-ESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQE 207
Query: 162 RLAMWLFSE----------------------------------MRNSGCRPDPSVYNALI 187
LA+ +F+ MR GC PD +N LI
Sbjct: 208 SLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLI 267
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
A L + LA L + G+ +P+ +TYN LL AC++ N+D +F+++
Sbjct: 268 NARLKSGGLTPNLAVELLDMVRNSGL---RPDAITYNTLLSACSRDSNLDGAVKVFEDME 324
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
PD++TYN ++ YG+ G+ E E + ++ PD +T+N L+ ++ + + +
Sbjct: 325 AHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTE 384
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK----YTPSFITY 363
K+++V++ + T+N++I YGK QG+ + Q MK P ITY
Sbjct: 385 KVKEVYQQMQKMGFGKDEMTYNTIIHMYGK---QGQLDLALQLYKDMKGLSGRNPDAITY 441
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+I G + A + E+ +G + T +A++ Y G EA+ F
Sbjct: 442 TVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLR 501
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G PD+ Y ++ + N L + M +G P+ +
Sbjct: 502 SGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLY 546
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 163/348 (46%), Gaps = 8/348 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ E GK W + V + +Q D ++ L++ + G A +F+ M
Sbjct: 758 IIEAYGKQKLWQKAESVVGNL-RQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRD 816
Query: 175 GCRPDPSVYNALITAH-LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G P P+V + I H L + + L + Q M G + K +I+ ++L A A+A
Sbjct: 817 G--PSPTVESINILLHALCVDGRLEELYVVVEELQDM-GFKISKSSIL---LMLDAFARA 870
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
N+ +V ++ + + P I Y +++ K +++ E ++S M+ K ++ +
Sbjct: 871 GNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIW 930
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N ++ Y + + K QV++ + + +P T+N++II Y + R + + Q+M
Sbjct: 931 NSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRN 990
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
+ P TY+ +I+ +G + +A ++F+EL G + S + M++ +G ++
Sbjct: 991 LGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSK 1050
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
A+ L + N G+ P +T LL +Y+ + + +K+L ++ +
Sbjct: 1051 AEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEV 1098
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 146/334 (43%), Gaps = 5/334 (1%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
+V + + ++ A + +Y+ +I GK+ + A + +R SG PD +N+L++A
Sbjct: 737 QVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSA 796
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ + +A F M + P + + NILL A ++++ + +EL +
Sbjct: 797 YA----QCGCYERARAIFNTMM-RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDM 851
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+ ++DA+ + G I E++ + S MK+ P I + ++I+ K +
Sbjct: 852 GFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA 911
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
E + + + K L +NSM+ Y K V+Q++ P TY +I M
Sbjct: 912 EIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIM 971
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
Y + ++ LG D K+ T +++ A+ +A+ LFE + G+ D
Sbjct: 972 YCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLD 1031
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
S Y + K + +KLL+ M+ GI P
Sbjct: 1032 RSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEP 1065
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 151/361 (41%), Gaps = 33/361 (9%)
Query: 140 WYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI----------TA 189
W + +Y L+ A +FS++R SGC SV +++ TA
Sbjct: 676 WCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETA 735
Query: 190 H----------------------LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
H + K K KA ++ R P++ T+N L+
Sbjct: 736 HQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRT-PDLKTWNSLM 794
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
A AQ ++ A+F + +P + + N ++ A +G ++E+ V+ ++ K
Sbjct: 795 SAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFK 854
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
+ L++D++ + ++++++ S+ + PT+ + MI K + AE +
Sbjct: 855 ISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIM 914
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
+M + + ++ MY ++ + +++ + + G + +T N ++ YC
Sbjct: 915 VSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCR 974
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
+ P E LL + N+G+ P TYK L A+ K E ++L + + G+ ++ F
Sbjct: 975 DRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSF 1034
Query: 468 F 468
+
Sbjct: 1035 Y 1035
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 139/323 (43%), Gaps = 38/323 (11%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
++VF M+ R D Y+ +I+V G+ G A LF E+ G PD YN+L+
Sbjct: 317 VKVFEDMEAHRCQ-PDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLY 375
Query: 189 AH-------------------------------LHTRDKAKALAKALGYFQKMKGMERCK 217
A +H K L AL ++ MKG+
Sbjct: 376 AFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRN 435
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+ +TY +L+ + +A + AL E+ + + P + TY+ ++ Y K G +E E
Sbjct: 436 PDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDT 495
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
S M + KPD + +++++D + K +++ ++ P+ + MI+ K
Sbjct: 496 FSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMK 555
Query: 338 ARLQGKAEYVFQKMTAM-KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
+ + M + P I+ + + G C +++ AR++ ++ G +++
Sbjct: 556 ENRSDDIQKTIRDMEELCGMNPLEISS---VLVKGECFDLA-ARQLKVAITN-GYELEND 610
Query: 397 TLNAMLEAYCMNGLPTEADLLFE 419
TL ++L +Y +G +EA L E
Sbjct: 611 TLLSILGSYSSSGRHSEAFELLE 633
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 134/316 (42%), Gaps = 7/316 (2%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
++S M+ +G P +Y +I K K + A +M+ K + +N +
Sbjct: 879 IYSSMKAAGYLPTIRLYRMMIELLC----KGKRVRDAEIMVSEMEEA-NFKVELAIWNSM 933
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
L+ + + +++ + E+ L PD TYN ++ Y ++ +E ++ +M++
Sbjct: 934 LKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGL 993
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
P + T+ LI ++GK++ ++ EQ+F+ L+ K +++M+ + KAE
Sbjct: 994 DPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEK 1053
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+ Q M P+ T ++ Y N A ++ L ++ +++++AY
Sbjct: 1054 LLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYL 1113
Query: 407 MN-GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+ + + L E G+ PD + +A + + K V LLK +E G
Sbjct: 1114 RSKDYNSGIERLLEMKKE-GLEPDHRIWTCFVRAASFSKEKIEVMLLLKALEDIGFDLPI 1172
Query: 466 RFFLEALETFSSSLAG 481
R E S + G
Sbjct: 1173 RLLAGRPELLVSEVDG 1188
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 163/341 (47%), Gaps = 16/341 (4%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L++ R M+ +R AD YS +I + + G A+ LF EM G + YN+L+
Sbjct: 213 LDLLRKME-ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
KA + M E PN++T+N+LL + + + N L+KE+
Sbjct: 272 GLC----KAGKWNDGALLLKDMVSRE-IVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 326
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
++P+I TYN +MD Y + E ++L M N+C PDI+TF LI Y + D
Sbjct: 327 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDD 386
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINY---GKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+VF+++ T++ ++ + GK +L AE +FQ+M + P +TY
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL---AEELFQEMVSHGVLPDVMTYG- 442
Query: 366 IITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
I + G CDN + +A EIF++L K D+ + ++E C G +A LF +
Sbjct: 443 -ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
GV P+ TY ++ K LL++ME++G PN
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 542
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 151/307 (49%), Gaps = 9/307 (2%)
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
+T A + ++ G PD + +N LI L K +++A+ +M C+P+
Sbjct: 138 KTCFAYSVLGKVMKLGYEPDTTTFNTLIKG-LFLEGK---VSEAVVLVDRMVE-NGCQPD 192
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+VTYN ++ ++ + L +++ E + D++TY+ ++D+ ++G I S+
Sbjct: 193 VVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 252
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
M++ K ++T+N L+ K ++ + K ++ + P + TFN ++ + K
Sbjct: 253 EMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEG 312
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVST 397
+A ++++M +P+ ITY + M GYC + +S A + D + + + T
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTL--MDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
++++ YCM + +F N G+ ++ TY +L + + ++ +L ++L + M
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Query: 458 QNGIVPN 464
+G++P+
Sbjct: 431 SHGVLPD 437
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 143/331 (43%), Gaps = 5/331 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+S+ + + + Q L + ++ +G + N +I A + LG
Sbjct: 91 FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYS-VLGKV 149
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K+ G E P+ T+N L++ V + L + E+ PD+ TYN +++ +
Sbjct: 150 MKL-GYE---PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+G +L +M+ K D+ T++ +IDS + D +FK + K ++ T
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+NS++ KA + + M + + P+ IT+ ++ ++ + A E++ E+
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G + T N +++ YCM +EA+ + + +PD T+ L K Y +
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
K+ + + + G+V N + ++ F S
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 153/337 (45%), Gaps = 13/337 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L K+ KW + + M R + + ++ L+ V K+G+ + A L+ EM
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMV-SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 327
Query: 175 GCRPDPSVYNALITAH-LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G P+ YN L+ + + R L++A M +C P+IVT+ L++
Sbjct: 328 GISPNIITYNTLMDGYCMQNR-----LSEANNMLDLMV-RNKCSPDIVTFTSLIKGYCMV 381
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ VD +F+ + + L + TY+ ++ + ++G IK E + M S+ PD++T+
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+L+D +K ++F+ L SK + + ++I K A +F +
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501
Query: 354 MKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P+ +TY +I+ G C ++S A + ++ + G T N ++ A+ +G
Sbjct: 502 KGVKPNVMTYTVMIS--GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
T + L E + G + D+S+ K++ A MK L
Sbjct: 560 TASAKLIEEMKSCGFSADASSIKMVIDMLLSA-MKRL 595
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 165/392 (42%), Gaps = 75/392 (19%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ L++ K G+ + A+ +F EMRN GC+P+ +NALI H R K + K
Sbjct: 375 DVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMH-GNRGKFTEMMKV 433
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQ------------------------------- 232
F+ +K + C P+IVT+N LL Q
Sbjct: 434 ---FEDIKTFQ-CSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLIS 489
Query: 233 ----ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
+ DQ A++K + E+ + PD+ +YN V+ A + G+ K+ E VL+ MK +CKP
Sbjct: 490 SYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKP 549
Query: 289 DIITFNLLIDSYGKRQAFDKM-----------------------------------EQVF 313
+ +T+ L+ +Y + ++M E+ F
Sbjct: 550 NELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAF 609
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
L P + T N+M+ YG+ ++ KA + M +TPS TY ++ MY
Sbjct: 610 LELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRS 669
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
N R+ EI E+ G + + N ++ AYC NG +A + G PD TY
Sbjct: 670 ANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITY 729
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+Y +M ++ M ++G PN+
Sbjct: 730 NTFIASYAADSMFVEAIDVVCYMIKHGCKPNQ 761
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 158/346 (45%), Gaps = 11/346 (3%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
+ D Y+ +I G+ R A+ +F +M GC+P YN ++ +
Sbjct: 196 FDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKM---GMPW 252
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
K +G +MK P+ TYN L+ C + ++ + KE+ + +PD TYN
Sbjct: 253 NKMVGLVDRMKS-AGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNA 311
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++D YGK+ KE VL M+ N C P I+T+N LI +Y + + ++ ++
Sbjct: 312 LLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKG 371
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
KP + T+ +++ + KA A +F++M P+ T+ +I M+G +
Sbjct: 372 IKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMM 431
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
++F+++ + T N +L + NG+ +E +F+ G P+ T+ L +Y
Sbjct: 432 KVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSY 491
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGS 486
++ + + KRM + G+ P+ L ++++ LA G
Sbjct: 492 SRCGSFDQAMAVYKRMLEAGVNPD-------LSSYNAVLAALARGG 530
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 167/331 (50%), Gaps = 10/331 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D+ Y+ LI+ + A + EM+ +G PD YNAL+ + +R +A+
Sbjct: 270 DSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAME-- 327
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
Q+M+G C P+IVTYN L+ A A+ ++ L ++ E + PD++TY ++
Sbjct: 328 --VLQEMEG-NGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLS 384
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ K G K + M++ CKP+I TFN LI +G R F +M +VF+ + + P
Sbjct: 385 GFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSP 444
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T+N+++ +G+ + + VF++M + P T+ +I+ Y C + +A ++
Sbjct: 445 DIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVY 504
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ + G + +S+ NA+L A GL +++ + + P+ TY L AY A
Sbjct: 505 KRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAY--A 562
Query: 444 NMKELVQKLLKRMEQ--NGIVPNKRFFLEAL 472
N KE ++++ E+ +GI+ + L+ L
Sbjct: 563 NGKE-IERMCALAEEIYSGIIEPRAVLLKTL 592
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 169/361 (46%), Gaps = 8/361 (2%)
Query: 119 LGKSDKWLQCLEVFRWMQ--KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGC 176
LG K L VF W++ K+ + + I + +I+++GK G+ A L + G
Sbjct: 137 LGFYKKCDTALRVFEWVRNRKESELLLNGSIIAVIISILGKGGRVSAAASLLHNLCKDGF 196
Query: 177 RPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ-ARN 235
D Y ++ITA +A+ F+KM+ + CKP ++TYN++L +
Sbjct: 197 DVDVYAYTSMITAFTSNGRYREAVM----VFKKMEEVG-CKPTLITYNVILNVYGKMGMP 251
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
+++ L + + +APD YTYN ++ + + +E VL MK PD +T+N
Sbjct: 252 WNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNA 311
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
L+D YGK + + +V + + + P++ T+NS+I Y + L A + +M
Sbjct: 312 LLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKG 371
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
P TY +++ + A +IF+E+ G + T NA+++ + G TE
Sbjct: 372 IKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMM 431
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+FE+ +PD T+ L + + M V + K M++ G VP + F + ++
Sbjct: 432 KVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSY 491
Query: 476 S 476
S
Sbjct: 492 S 492
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 140/328 (42%), Gaps = 47/328 (14%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VF+ M K+ ++ + ++ LI+ + G AM ++ M +G PD S YNA++ A
Sbjct: 468 VFKEM-KRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAAL 526
Query: 191 LHT---RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
+ K LA+ MK RCKPN +TY LL A A + ++++ AL +E++
Sbjct: 527 ARGGLWKQSEKVLAE-------MKD-GRCKPNELTYCSLLHAYANGKEIERMCALAEEIY 578
Query: 248 ESIL-----------------------------------APDIYTYNGVMDAYGKNGMIK 272
I+ +PDI T N ++ YG+ M+
Sbjct: 579 SGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVA 638
Query: 273 EMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
+ +L MK P + T+N L+ Y + F++ E++ + ++ +P + ++N++I
Sbjct: 639 KANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVI 698
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKD 392
Y + A V +M P ITY I Y A ++ + K G
Sbjct: 699 YAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCK 758
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFEN 420
ST N++++ YC EA + N
Sbjct: 759 PNQSTYNSIVDWYCKLNRRDEASMFVNN 786
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 103/255 (40%), Gaps = 36/255 (14%)
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
+++ + V +L L + D+Y Y ++ A+ NG +E V +M+
Sbjct: 170 VIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEV 229
Query: 285 QCKPDIITFNLLIDSYGKR-QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
CKP +IT+N++++ YGK ++KM + + + P T+N++I + L +
Sbjct: 230 GCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEE 289
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A V ++M ++P +TY ++ +YG A E+ E+
Sbjct: 290 AAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEG--------------- 334
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
NG P P TY L AY + + E +L +M + GI P
Sbjct: 335 ----NGCP----------------PSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKP 374
Query: 464 NKRFFLEALETFSSS 478
+ + L F +
Sbjct: 375 DVFTYTTLLSGFEKA 389
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 88/180 (48%), Gaps = 5/180 (2%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
+QR + D + ++++ G++ A + M+ G P + YN+L+ ++++R
Sbjct: 613 RQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLM--YMYSRSA 670
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
++ + KG+ +P+I++YN ++ A + + + + E+ ES APDI
Sbjct: 671 NFERSEEILREILAKGI---RPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDII 727
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TYN + +Y + M E V+ M + CKP+ T+N ++D Y K D+ +L
Sbjct: 728 TYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNL 787
>gi|255577248|ref|XP_002529506.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531022|gb|EEF32875.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 808
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 169/371 (45%), Gaps = 14/371 (3%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VFRWM+ Q+ Y A T +Y+ +I + + T A LF EM+ C+PD YNALI AH
Sbjct: 129 VFRWMKLQKNYCARTDMYNMMIRLHARHNLTDQARGLFFEMQEWRCKPDSETYNALINAH 188
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
+A A+ + M E P+ TYN L+ AC + N + + K++ E+
Sbjct: 189 ----GRAGQWRWAMNIMEDML-REAIPPSRSTYNNLINACGSSGNWREALKVSKQMTENG 243
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
+ PD+ T+N V+ AY + S MK +PD T N++I K +K
Sbjct: 244 VGPDLVTHNIVLSAYKTGAQYSKALSYFELMKGTNIRPDTTTRNIVIYCLVKLGQCEKAI 303
Query: 311 QVFKSLMHSKE--KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+F S+ + +P + TF S+I Y + + VF M A TP+ ++Y +I
Sbjct: 304 DIFNSMREKRAECRPDIVTFTSIIHLYSLSGQVENCKAVFSTMLAEGLTPTIVSYNALIG 363
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
Y + A +F ++ G V + ++L +Y + P +A +F + P
Sbjct: 364 AYAFHGMSEEALSVFKKIKASGLLPDVVSYTSLLSSYGRSKQPKKAREMFNMMKKAKLKP 423
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAK 488
+ ++ L AY + K+L+ MEQ+GI PN + T + LA K
Sbjct: 424 NVVSFNALIDAYGSNGLLADAVKVLREMEQDGIHPN-------IVTICTLLAACGRCGQK 476
Query: 489 TDLTRSLSTAK 499
++ LS AK
Sbjct: 477 VNIDAVLSAAK 487
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 153/364 (42%), Gaps = 41/364 (11%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L G++ +W + + M ++ Y+ LI G G R A+ + +M +
Sbjct: 184 LINAHGRAGQWRWAMNIMEDMLREA-IPPSRSTYNNLINACGSSGNWREALKVSKQMTEN 242
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME-------------------- 214
G PD +N +++A+ +KAL YF+ MKG
Sbjct: 243 GVGPDLVTHNIVLSAY----KTGAQYSKALSYFELMKGTNIRPDTTTRNIVIYCLVKLGQ 298
Query: 215 ----------------RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
C+P+IVT+ ++ + + V+ A+F + L P I +Y
Sbjct: 299 CEKAIDIFNSMREKRAECRPDIVTFTSIIHLYSLSGQVENCKAVFSTMLAEGLTPTIVSY 358
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N ++ AY +GM +E SV ++K++ PD++++ L+ SYG+ + K ++F +
Sbjct: 359 NALIGAYAFHGMSEEALSVFKKIKASGLLPDVVSYTSLLSSYGRSKQPKKAREMFNMMKK 418
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
+K KP + +FN++I YG L A V ++M P+ +T ++ G C
Sbjct: 419 AKLKPNVVSFNALIDAYGSNGLLADAVKVLREMEQDGIHPNIVTICTLLAACGRCGQKVN 478
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
+ G + N+ + +Y G +A L+ + M V P+S TY +L
Sbjct: 479 IDAVLSAAKMRGIKLNTVACNSAIGSYMNVGEYEKAVALYNSMRKMKVAPNSVTYTVLIS 538
Query: 439 AYTK 442
K
Sbjct: 539 GCCK 542
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 139/329 (42%), Gaps = 5/329 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI G + A+ +F +++ SG PD Y +L++++ ++K KA F
Sbjct: 358 YNALIGAYAFHGMSEEALSVFKKIKASGLLPDVVSYTSLLSSY----GRSKQPKKAREMF 413
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
MK + KPN+V++N L+ A + + +E+ + + P+I T ++ A G+
Sbjct: 414 NMMKK-AKLKPNVVSFNALIDAYGSNGLLADAVKVLREMEQDGIHPNIVTICTLLAACGR 472
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G +++VLS K K + + N I SY ++K ++ S+ K P T
Sbjct: 473 CGQKVNIDAVLSAAKMRGIKLNTVACNSAIGSYMNVGEYEKAVALYNSMRKMKVAPNSVT 532
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ +I K GKA F M +K + +I Y ++ A IF +
Sbjct: 533 YTVLISGCCKMSKYGKAIEFFADMMELKIALTKEVCSSVICAYSKQGQITEAESIFTMMK 592
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G + T AML AY +A L + + + D+ L +A+ K
Sbjct: 593 MAGCCPDIITFTAMLHAYNAGEHWGKACDLIQEMEDYDIQLDTIACSALMRAFNKRGNPS 652
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFS 476
V L + M++ I + F E + S
Sbjct: 653 QVLILAEFMKEKEIPFSDAIFFEMVSACS 681
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 102/225 (45%), Gaps = 14/225 (6%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTG-IYSKLIAVMGKKGQTRLAMWLFSEMR 172
+L K K+ + +E F M + + IA T + S +I K+GQ A +F+ M+
Sbjct: 535 VLISGCCKMSKYGKAIEFFADMMELK--IALTKEVCSSVICAYSKQGQITEAESIFTMMK 592
Query: 173 NSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
+GC PD + TA LH + + KA Q+M+ + + + + + L+RA +
Sbjct: 593 MAGCCPDIITF----TAMLHAYNAGEHWGKACDLIQEMEDYD-IQLDTIACSALMRAFNK 647
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
N QV L + + E + + ++ A ++++ ++L+ MK + +++
Sbjct: 648 RGNPSQVLILAEFMKEKEIPFSDAIFFEMVSAC---SLLRDWRTILNLMKLMEPSFSVVS 704
Query: 293 FNL---LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
L L+ G+ + M ++F + S + T++ M+ N
Sbjct: 705 IGLLNQLLHVLGRSGKIESMMKLFYKITASGAEINFNTYSIMLKN 749
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 176/369 (47%), Gaps = 23/369 (6%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM 171
C +L + L K+ + + L FR MQ +ADT IY+ L++ + K+ + A+ + EM
Sbjct: 47 CSILIDGLCKAKRSIDALRCFRAMQGS-GIVADTVIYTALLSGLWKEKRLDQALAILHEM 105
Query: 172 RNSGCRPDPSVYNALITAHLHTR--DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA 229
R+ GC P+ YN+LI D+A+ L F+ MK +E C P++VTYN LL
Sbjct: 106 RDHGCEPNVVTYNSLIDGLCKNNEPDRAQEL------FEHMKSVE-CSPSMVTYNTLLDG 158
Query: 230 CAQARNVDQVNALFKEL-------HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
+ +++ ALF+E+ + +P++ TY+ ++D K + + +L MK
Sbjct: 159 LFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMK 218
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
+ C PD+IT+ +L+D K +V + ++ + P L T+NS++ +AR
Sbjct: 219 ARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVS 278
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL---GKDMKVSTLN 399
A + + MT TP+ +TY +I G C V R ++ L+ + G + N
Sbjct: 279 DALALMRDMTCRGCTPNVVTYGTLID--GLC-KVGRVKDACAMLADMIDKGGTPDLMIYN 335
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
++ C E+ L + + G+ PD TY + ++N + +LL ++
Sbjct: 336 MLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSR 395
Query: 460 GIVPNKRFF 468
G P+ +
Sbjct: 396 GCPPDVILY 404
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 166/407 (40%), Gaps = 50/407 (12%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K+++ Q +E+ M K R D Y+ L+ + K+ + A + EM +
Sbjct: 196 VLIDGLCKANRVSQAVELLESM-KARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLD 254
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY---------- 223
+GC P+ YN+L LH +A+ ++ AL + M C PN+VTY
Sbjct: 255 AGCVPNLVTYNSL----LHGLCRARRVSDALALMRDMT-CRGCTPNVVTYGTLIDGLCKV 309
Query: 224 -------------------------NILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
N+L+ +A VD+ AL + + PD+ TY
Sbjct: 310 GRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTY 369
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
+ V+ ++ + E +L +KS C PD+I ++ LID K D+ +++ +
Sbjct: 370 SSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAG 429
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NV 376
+ T++++I KA +A + +M M PS +TY +I G CD ++
Sbjct: 430 DGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIK--GLCDLNHL 487
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM-----GVTPDSS 431
A E+ +E+ + T N ++ C A +L E + G D+
Sbjct: 488 DEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTI 547
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
Y L KA + M NG++P+ + LE S
Sbjct: 548 AYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKS 594
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 130/297 (43%), Gaps = 14/297 (4%)
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQAR 234
C+PD Y AL+ + + +A F +M+ + PN+ +IL+ C R
Sbjct: 5 CQPDVYTYAALLRGFC----RGGEIDQAQRCFDEMRS-KNLVPNVFLCSILIDGLCKAKR 59
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
++D + F+ + S + D Y ++ K + + ++L M+ + C+P+++T+N
Sbjct: 60 SIDALRC-FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYN 118
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
LID K D+ +++F+ + + P++ T+N+++ + +A +FQ+M
Sbjct: 119 SLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDR 178
Query: 355 -------KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
+ +P+ ITY +I + VS+A E+ + + G V T +++ C
Sbjct: 179 RSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCK 238
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A + + G P+ TY L +A L++ M G PN
Sbjct: 239 ESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPN 295
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 117/275 (42%), Gaps = 51/275 (18%)
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK-RQAFDK 308
I PD+YTY ++ + + G I + + M+S P++ ++LID K +++ D
Sbjct: 4 ICQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDA 63
Query: 309 MEQVFKSLMHS-----------------KEK------------------PTLPTFNSMII 333
+ + F+++ S KEK P + T+NS+I
Sbjct: 64 L-RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLID 122
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE-LSKLGKD 392
K +A+ +F+ M +++ +PS +TY ++ + RA +F E L + D
Sbjct: 123 GLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHD 182
Query: 393 MK------VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
M V T + +++ C ++A L E+ G +PD TY +L K +
Sbjct: 183 MDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKV 242
Query: 447 ELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
++L+ M G VPN L T++S L G
Sbjct: 243 AAAWEVLREMLDAGCVPN-------LVTYNSLLHG 270
>gi|356516744|ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 882
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 162/316 (51%), Gaps = 7/316 (2%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L F W+++Q + D Y+ ++ ++G+ + L +M GC+P+ YN LI
Sbjct: 370 LSFFYWLKRQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLI- 428
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
H+ +A L +AL F +M+ M C+P+ VTY L+ A+A +D ++++ + E
Sbjct: 429 ---HSYGRANYLGEALNVFNQMQEMG-CEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQE 484
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
L+PD +TY+ +++ GK+G + + M C P+I+T+N+LI K + +
Sbjct: 485 VGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQT 544
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
++++ + ++ KP T++ ++ G +AE VF +M + P Y +I
Sbjct: 545 ALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQNNWVPDEPVYGLLID 604
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC-MNGLPTEADLLFENSHNMGVT 427
++G NV +A E + + + G V T N++L A+ ++ LP +LL +N +G+
Sbjct: 605 LWGKAGNVEKAWEWYHAMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYNLL-QNMVTLGLN 663
Query: 428 PDSSTYKLLYKAYTKA 443
P TY LL T+A
Sbjct: 664 PSLQTYTLLLSCCTEA 679
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 116/262 (44%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
AL +F +K + TY ++ +AR +N L +++ + P++ TYN ++
Sbjct: 369 ALSFFYWLKRQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLI 428
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+YG+ + E +V ++M+ C+PD +T+ LID + K D +++ +
Sbjct: 429 HSYGRANYLGEALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLS 488
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P T++ MI GK+ A +F +M P+ +TY +I + N A ++
Sbjct: 489 PDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALKL 548
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+ ++ G T + ++E G EA+ +F PD Y LL + K
Sbjct: 549 YRDMQNAGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQNNWVPDEPVYGLLIDLWGK 608
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
A E + M + G++PN
Sbjct: 609 AGNVEKAWEWYHAMLRAGLLPN 630
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 105/245 (42%), Gaps = 14/245 (5%)
Query: 238 QVNALFKELHESILA--------------PDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
Q N + K+L + +A D +TY ++ G+ + +L +M
Sbjct: 355 QANQILKQLQDHSVALSFFYWLKRQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVK 414
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+ C+P+++T+N LI SYG+ + VF + +P T+ ++I + KA
Sbjct: 415 DGCQPNVVTYNRLIHSYGRANYLGEALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDV 474
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A ++++M + +P TY +I G N+S A +F E+ G + T N ++
Sbjct: 475 AMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIA 534
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
A L+ + N G PD TY ++ + E + + M+QN VP
Sbjct: 535 LQAKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQNNWVP 594
Query: 464 NKRFF 468
++ +
Sbjct: 595 DEPVY 599
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 105/229 (45%), Gaps = 7/229 (3%)
Query: 255 IYTYNGVMDAYGKNGMIKEMES---VLSRMKSNQCKP----DIITFNLLIDSYGKRQAFD 307
+Y N +DAY N ++K+++ LS + +P D T+ ++ G+ + F
Sbjct: 344 LYNLNFSIDAYQANQILKQLQDHSVALSFFYWLKRQPGFWHDGHTYTTMVGILGRAREFG 403
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
+ ++ + ++ +P + T+N +I +YG+A G+A VF +M M P +TY +I
Sbjct: 404 AINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLGEALNVFNQMQEMGCEPDRVTYCTLI 463
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
++ + A +++ + ++G T + M+ +G + A LF + G
Sbjct: 464 DIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCV 523
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
P+ TY +L KA + KL + M+ G P+K + +E
Sbjct: 524 PNIVTYNILIALQAKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEVLG 572
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 163/341 (47%), Gaps = 16/341 (4%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L++ R M+ +R AD YS +I + + G A+ LF EM G + YN+L+
Sbjct: 213 LDLLRKME-ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
KA + M E PN++T+N+LL + + + N L+KE+
Sbjct: 272 GLC----KAGKWNDGALLLKDMVSRE-IVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 326
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
++P+I TYN +MD Y + E ++L M N+C PDI+TF LI Y + D
Sbjct: 327 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDD 386
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINY---GKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+VF+++ T++ ++ + GK +L AE +FQ+M + P +TY
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL---AEELFQEMVSHGVLPDVMTYG- 442
Query: 366 IITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
I + G CDN + +A EIF++L K D+ + ++E C G +A LF +
Sbjct: 443 -ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
GV P+ TY ++ K LL++ME++G PN
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 542
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 151/307 (49%), Gaps = 9/307 (2%)
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
+T A + ++ G PD + +N LI L K +++A+ +M C+P+
Sbjct: 138 KTCFAYSVLGKVMKLGYEPDTTTFNTLIKG-LFLEGK---VSEAVVLVDRMVE-NGCQPD 192
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+VTYN ++ ++ + L +++ E + D++TY+ ++D+ ++G I S+
Sbjct: 193 VVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 252
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
M++ K ++T+N L+ K ++ + K ++ + P + TFN ++ + K
Sbjct: 253 EMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEG 312
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVST 397
+A ++++M +P+ ITY + M GYC + +S A + D + + + T
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTL--MDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
++++ YCM + +F N G+ ++ TY +L + + ++ +L ++L + M
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Query: 458 QNGIVPN 464
+G++P+
Sbjct: 431 SHGVLPD 437
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 143/331 (43%), Gaps = 5/331 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+S+ + + + Q L + ++ +G + N +I A + LG
Sbjct: 91 FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYS-VLGKV 149
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K+ G E P+ T+N L++ V + L + E+ PD+ TYN +++ +
Sbjct: 150 MKL-GYE---PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICR 205
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+G +L +M+ K D+ T++ +IDS + D +FK + K ++ T
Sbjct: 206 SGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+NS++ KA + + M + + P+ IT+ ++ ++ + A E++ E+
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G + T N +++ YCM +EA+ + + +PD T+ L K Y +
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
K+ + + + G+V N + ++ F S
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 149/325 (45%), Gaps = 12/325 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L K+ KW + + M R + + ++ L+ V K+G+ + A L+ EM
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMV-SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 327
Query: 175 GCRPDPSVYNALITAH-LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G P+ YN L+ + + R L++A M +C P+IVT+ L++
Sbjct: 328 GISPNIITYNTLMDGYCMQNR-----LSEANNMLDLMV-RNKCSPDIVTFTSLIKGYCMV 381
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ VD +F+ + + L + TY+ ++ + ++G IK E + M S+ PD++T+
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+L+D +K ++F+ L SK + + ++I K A +F +
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501
Query: 354 MKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P+ +TY +I+ G C ++S A + ++ + G T N ++ A+ +G
Sbjct: 502 KGVKPNVMTYTVMIS--GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559
Query: 412 TEADLLFENSHNMGVTPDSSTYKLL 436
T + L E + G + D+S+ K++
Sbjct: 560 TASAKLIEEMKSCGFSADASSIKMV 584
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI--YSKLIAVMGKKGQTRLAMWLFSEM 171
+L + L + K + LE+F +QK + D GI Y+ +I M K G+ A LF +
Sbjct: 443 ILLDGLCDNGKLEKALEIFEDLQKSKM---DLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
G +P+ Y +I+ K +L++A +KM+ + PN TYN L+RA
Sbjct: 500 PCKGVKPNVMTYTVMISGLC----KKGSLSEANILLRKMEE-DGNAPNDCTYNTLIRAHL 554
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ ++ L +E+ + D + V+D
Sbjct: 555 RDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 157/326 (48%), Gaps = 3/326 (0%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
A +++ ++ V + G+ L MR PD +N LI A + A A
Sbjct: 61 ATVQVFNAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSGCLAPGSAF 120
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
L + G+ +P+++TYN L+ AC+Q N+D A+F+E+ S PD++TYN ++
Sbjct: 121 DLLLEVRQVGL---RPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMV 177
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+G+ G ++ E + + KPD +T+N L+ ++ K D +E+V + L+ + K
Sbjct: 178 SVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFK 237
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
T+N+MI YGK A ++ +M A+ TP +TY +I G D +S A ++
Sbjct: 238 KDGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKV 297
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+E++ G + T +A++ AY G EA F + GV PD Y ++ +
Sbjct: 298 LEEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIAR 357
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFF 468
+ + L + M +G P+ +
Sbjct: 358 SGDMRKLMALYQTMMNDGYRPDNALY 383
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 145/301 (48%), Gaps = 11/301 (3%)
Query: 182 VYNALITAHLHTR--DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQV 239
V+NA++ + + D + L A M+G E +P++V++N L+ A A++ +
Sbjct: 65 VFNAMMGVYARSGRFDDVRQLLDA------MRGQE-LEPDLVSFNTLINARAKSGCLAPG 117
Query: 240 NA--LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+A L E+ + L PD+ TYN ++ A + + + +V M +++C+PD+ T+N ++
Sbjct: 118 SAFDLLLEVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMV 177
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+G+ E++F+ L+ KP T+NS++ + K E V +++ +
Sbjct: 178 SVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFK 237
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
ITY +I MYG + A ++DE+ LG T ++++ ++A +
Sbjct: 238 KDGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKV 297
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
E + G+ P T+ L AY K +E + M +G+ P++ +L L+ +
Sbjct: 298 LEEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIAR 357
Query: 478 S 478
S
Sbjct: 358 S 358
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 142/340 (41%), Gaps = 11/340 (3%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG--QTRLAMWLFSEMRNSGCR 177
G+ D Q L+ R + + D ++ LI K G A L E+R G R
Sbjct: 77 GRFDDVRQLLDAMRGQELE----PDLVSFNTLINARAKSGCLAPGSAFDLLLEVRQVGLR 132
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
PD YN LI+A + L A+ F++M E C+P++ TYN ++ +
Sbjct: 133 PDVITYNTLISAC----SQGSNLDDAVAVFEEMMASE-CRPDLWTYNAMVSVHGRCGKAQ 187
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+F+EL E PD TYN ++ A+ K G +E V + K D IT+N +I
Sbjct: 188 DAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYNTMI 247
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
YGK D ++ + P T+ +I + GK A V ++M
Sbjct: 248 HMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMADAGLK 307
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P+ +T+ +I Y A F + G ML+ +G + L
Sbjct: 308 PTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSGDMRKLMAL 367
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
++ N G PD++ Y+++ A K N + ++ +++ ME
Sbjct: 368 YQTMMNDGYRPDNALYQVMLAALAKGNEYDEIEAVVQDME 407
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/390 (21%), Positives = 171/390 (43%), Gaps = 44/390 (11%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ E GK W Q E F KQ I D I++ LI + G A +F M
Sbjct: 596 MIEAYGKIKLW-QHAENFVKGLKQEPSI-DRRIWNALIHAYAESGLYEHARAVFDIMIEK 653
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P N ++ A L + L + Q M G + K ++ ++L A +A
Sbjct: 654 GPLPTIDSVNGMMRA-LIIDGRLDELYVIVQELQDM-GFKISKSTVI---LMLDAFTKAG 708
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
++ +V ++ + E+ P+++ Y ++ +N +++E ++ M+ +PD+ N
Sbjct: 709 DIFEVMKIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEMERAGFEPDLTILN 768
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY------------------- 335
L+ Y FDK +V+ S++ + +P T+N++I+ Y
Sbjct: 769 TLLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRNLRPEEGFTLLNEMGKK 828
Query: 336 ----------------GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
GKA+L +AE +F+++ + Y + Y ++ +Y N S+A
Sbjct: 829 GLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKIYRDACNHSKA 888
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
++ + + G + ++T++ ++ +Y G P EA+ + + + + + Y ++ A
Sbjct: 889 EQLLASMKEDGIEPTIATMHILMTSYGTAGHPDEAEKVLNSLKSSSLEVSTLPYSTVFNA 948
Query: 440 YTKANMKEL-VQKLLKRMEQNGIVPNKRFF 468
Y K L + KLL+ M+ +G+ P+ + +
Sbjct: 949 YLKNGDYNLGITKLLE-MKADGVKPDHQVW 977
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 146/356 (41%), Gaps = 32/356 (8%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH------------- 190
D +Y LI + + A +FS+M+ G P +Y ++I+A+
Sbjct: 518 DCNLYEYLITCLEEAEFFPEASQVFSDMQFIGIEPSRKIYESMISAYCKLGFPETAHQLM 577
Query: 191 ---------LHTRDKAKALAKALGYFQK-------MKGMERCKPNIV--TYNILLRACAQ 232
L+ + +A G + +KG+++ +P+I +N L+ A A+
Sbjct: 578 DEAVQSGISLNILSSRVTMIEAYGKIKLWQHAENFVKGLKQ-EPSIDRRIWNALIHAYAE 636
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+ + A+F + E P I + NG+M A +G + E+ ++ ++ K T
Sbjct: 637 SGLYEHARAVFDIMIEKGPLPTIDSVNGMMRALIIDGRLDELYVIVQELQDMGFKISKST 696
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
L++D++ K ++ +++ + + P + + SMI + + E + +M
Sbjct: 697 VILMLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEME 756
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ P ++ MY N + E++ + + G + T N ++ Y N P
Sbjct: 757 RAGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRNLRPE 816
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
E L G+TP +YK L A KA + E ++L + + G N+ +
Sbjct: 817 EGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLY 872
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 142/338 (42%), Gaps = 22/338 (6%)
Query: 152 IAVMGKKGQTRLAMWLFSEMRNSGCRP---DPSVYNALITAHLHTRDKAKALAKALGYFQ 208
I ++ K + AM +S M+ C D ++Y LIT ++A+ +A F
Sbjct: 488 IMLLCKNQKIAAAMQEYSSMQMLKCGSFGQDCNLYEYLITC----LEEAEFFPEASQVFS 543
Query: 209 KMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM-DAY 265
M+ G+E P+ Y ++ A + + + L E +S ++ +I + M +AY
Sbjct: 544 DMQFIGIE---PSRKIYESMISAYCKLGFPETAHQLMDEAVQSGISLNILSSRVTMIEAY 600
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
GK + + E+ + +K + D +N LI +Y + ++ VF ++ PT+
Sbjct: 601 GKIKLWQHAENFVKGLK-QEPSIDRRIWNALIHAYAESGLYEHARAVFDIMIEKGPLPTI 659
Query: 326 PTFNSM----IINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
+ N M II+ RL + + Q++ M + S T ++ + ++ +
Sbjct: 660 DSVNGMMRALIID---GRLD-ELYVIVQELQDMGFKISKSTVILMLDAFTKAGDIFEVMK 715
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
I++ + + G + +M+ C N + +L+ G PD + L YT
Sbjct: 716 IYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLLLMYT 775
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSL 479
+ ++ + + G+ PN+ + + +S +L
Sbjct: 776 GNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRNL 813
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 155/322 (48%), Gaps = 5/322 (1%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
++S LI K+G+ AM +FS+MR G PD Y +I K+ + A+ Y
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC----KSGRVEDAMRY 431
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F++M ER P + YN L+ + D+ L E+ + + D +N ++D++
Sbjct: 432 FEQMID-ERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K G + E E + M KPDIIT++ LID Y D+ ++ S++ KP
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T+N++I Y K A +F++M + +P ITY I+ + A+E++ +
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
++ G +++ST N +L C N L EA +F+N + ++ T+ ++ A K
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670
Query: 447 ELVQKLLKRMEQNGIVPNKRFF 468
+ + L + NG+VP+ R +
Sbjct: 671 DEAKDLFAALSANGLVPDVRTY 692
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 150/328 (45%), Gaps = 7/328 (2%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
R + + YS +IA + K AM + + M +G P+ YN+++ H +
Sbjct: 227 DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIV----HGYCSS 282
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+A+G+ +KM + +P++VTYN L+ + + +F + + L P+I T
Sbjct: 283 GQPKEAIGFLKKMHS-DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITT 341
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y ++ Y G + EM +L M N P+ F++LI +Y K+ D+ VF +
Sbjct: 342 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMR 401
Query: 318 HSKEKPTLPTFNSMI-INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
P T+ ++I I R++ Y F++M + +P I Y +I D
Sbjct: 402 QQGLNPDTVTYGTVIGILCKSGRVEDAMRY-FEQMIDERLSPGNIVYNSLIHSLCIFDKW 460
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A+E+ E+ G + N++++++C G E++ LF+ +GV PD TY L
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 520
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y A + KLL M G+ P+
Sbjct: 521 IDGYCLAGKMDEATKLLASMVSVGMKPD 548
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 136/319 (42%), Gaps = 6/319 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI G+ L + G R D + L+ + + A+ L
Sbjct: 94 YGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 153
Query: 208 QKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNAL-FKELHESILAPDIYTYNGVMDAY 265
++ C PN+ +YNILL+ C + R+ + + L PD+ +Y V++ +
Sbjct: 154 TQLG----CIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G + + M P+++T++ +I + K QA DK +V S++ + P
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+NS++ Y + +A +KM + P +TY ++ + AR++FD
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
++K G +++T +L+ Y G E L + G+ P+ + +L AY K
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389
Query: 446 KELVQKLLKRMEQNGIVPN 464
+ + +M Q G+ P+
Sbjct: 390 VDQAMLVFSKMRQQGLNPD 408
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 125/259 (48%), Gaps = 11/259 (4%)
Query: 217 KPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
+ + + + LL+ CA R D ++ + + + + P++++YN ++ +E
Sbjct: 123 RVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEAL 182
Query: 276 SVLSRMKSN--QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
+L M + C PD++++ +I+ + K DK + ++ P + T++S+I
Sbjct: 183 ELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIA 242
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL---G 390
KA+ KA V M P+ TY I+ +GYC + + +E L K+ G
Sbjct: 243 ALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIV--HGYCSS-GQPKEAIGFLKKMHSDG 299
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY-TKANMKELV 449
+ V T N++++ C NG TEA +F++ G+ P+ +TY L + Y TK + E+
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM- 358
Query: 450 QKLLKRMEQNGIVPNKRFF 468
LL M +NGI PN F
Sbjct: 359 HGLLDLMVRNGIHPNHYVF 377
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 134/311 (43%), Gaps = 13/311 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ L+ + K G+ A +F M G +P+ + Y L+ + AL +
Sbjct: 303 DVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYA----TKGALVEM 358
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
G M G+ PN ++IL+ A A+ VDQ +F ++ + L PD TY V
Sbjct: 359 HGLLDLMVRNGIH---PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ K+G +++ +M + P I +N LI S +DK +++ ++
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
FNS+I ++ K ++E +F M + P ITY +I Y + A +
Sbjct: 476 CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 535
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL----LY 437
+ + +G T N ++ YC +A +LF + GV+PD TY + L+
Sbjct: 536 LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF 595
Query: 438 KAYTKANMKEL 448
+ A KEL
Sbjct: 596 QTRRTAAAKEL 606
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 88/195 (45%), Gaps = 13/195 (6%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS LI G+ A L + M + G +PD YN LI + K + A
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC----KISRMEDA 568
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L F++M+ P+I+TYNI+L+ Q R L+ + ES ++ TYN ++
Sbjct: 569 LVLFREMES-SGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILH 627
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDII----TFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
KN + E RM N C D+ TFN++I + K D+ + +F +L +
Sbjct: 628 GLCKNNLTDEA----LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 683
Query: 320 KEKPTLPTFNSMIIN 334
P + T++ M N
Sbjct: 684 GLVPDVRTYSLMAEN 698
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 89/210 (42%), Gaps = 15/210 (7%)
Query: 278 LSRMKSNQCKPDIITFNLLIDS---YGKRQ-AFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
++R +++ P++ T+ +LI S G+ F + V K P +
Sbjct: 79 MARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCA 138
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
+ R + V ++MT + P+ +Y I + G CD +R++E + L + D
Sbjct: 139 D---KRTSDAMDIVLRRMTQLGCIPNVFSYN--ILLKGLCDE-NRSQEALELLQMMPDDG 192
Query: 394 KVSTLNAMLEAYCMNGLPTEADL--LFENSHNM---GVTPDSSTYKLLYKAYTKANMKEL 448
+ + +NG E DL + H M G+ P+ TY + A KA +
Sbjct: 193 GDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDK 252
Query: 449 VQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
++L M +NG++PN R + + + SS
Sbjct: 253 AMEVLTSMVKNGVMPNCRTYNSIVHGYCSS 282
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 22/198 (11%)
Query: 100 LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG 159
+N Y K+ R E +LF E+ S D Y+ ++ + +
Sbjct: 556 INGYCKISRMEDALVLFREMESS-----------------GVSPDIITYNIILQGLFQTR 598
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
+T A L+ + SG + + S YN + LH K +AL FQ + + +
Sbjct: 599 RTAAAKELYVGITESGTQLELSTYNII----LHGLCKNNLTDEALRMFQNLC-LTDLQLE 653
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
T+NI++ A + D+ LF L + L PD+ TY+ + + + G+++E++ +
Sbjct: 654 TRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFL 713
Query: 280 RMKSNQCKPDIITFNLLI 297
M+ N C + N ++
Sbjct: 714 SMEENGCTANSRMLNSIV 731
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 155/322 (48%), Gaps = 5/322 (1%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
++S LI K+G+ AM +FS+MR G PD Y +I K+ + A+ Y
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC----KSGRVEDAMRY 431
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F++M ER P + YN L+ + D+ L E+ + + D +N ++D++
Sbjct: 432 FEQMID-ERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K G + E E + M KPDIIT++ LID Y D+ ++ S++ KP
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T+N++I Y K A +F++M + +P ITY I+ + A+E++ +
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
++ G +++ST N +L C N L EA +F+N + ++ T+ ++ A K
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670
Query: 447 ELVQKLLKRMEQNGIVPNKRFF 468
+ + L + NG+VP+ R +
Sbjct: 671 DEAKDLFAALSANGLVPDVRTY 692
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 150/328 (45%), Gaps = 7/328 (2%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
R + + YS +IA + K AM + + M +G P+ YN+++ H +
Sbjct: 227 DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIV----HGYCSS 282
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+A+G+ +KM + +P++VTYN L+ + + +F + + L P+I T
Sbjct: 283 GQPKEAIGFLKKMHS-DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITT 341
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y ++ Y G + EM +L M N P+ F++LI +Y K+ D+ VF +
Sbjct: 342 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMR 401
Query: 318 HSKEKPTLPTFNSMI-INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
P T+ ++I I R++ Y F++M + +P I Y +I D
Sbjct: 402 QQGLNPDTVTYGTVIGILCKSGRVEDAMRY-FEQMIDERLSPGNIVYNSLIHSLCIFDKW 460
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A+E+ E+ G + N++++++C G E++ LF+ +GV PD TY L
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 520
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y A + KLL M G+ P+
Sbjct: 521 IDGYCLAGKMDEATKLLASMVSVGMKPD 548
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 134/319 (42%), Gaps = 6/319 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI G+ L + G R D + L+ + + A+ L
Sbjct: 94 YGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 153
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE--SILAPDIYTYNGVMDAY 265
++ C PN+ +YNILL+ + L + + + PD+ +Y V++ +
Sbjct: 154 TQLG----CIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G + + M P+++T++ +I + K QA DK +V S++ + P
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+NS++ Y + +A +KM + P +TY ++ + AR++FD
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
++K G +++T +L+ Y G E L + G+ P+ + +L AY K
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389
Query: 446 KELVQKLLKRMEQNGIVPN 464
+ + +M Q G+ P+
Sbjct: 390 VDQAMLVFSKMRQQGLNPD 408
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 125/259 (48%), Gaps = 11/259 (4%)
Query: 217 KPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
+ + + + LL+ CA R D ++ + + + + P++++YN ++ +E
Sbjct: 123 RVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEAL 182
Query: 276 SVLSRMKSN--QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
+L M + C PD++++ +I+ + K DK + ++ P + T++S+I
Sbjct: 183 ELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIA 242
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL---G 390
KA+ KA V M P+ TY I+ +GYC + + +E L K+ G
Sbjct: 243 ALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIV--HGYCSS-GQPKEAIGFLKKMHSDG 299
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY-TKANMKELV 449
+ V T N++++ C NG TEA +F++ G+ P+ +TY L + Y TK + E+
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM- 358
Query: 450 QKLLKRMEQNGIVPNKRFF 468
LL M +NGI PN F
Sbjct: 359 HGLLDLMVRNGIHPNHYVF 377
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 134/311 (43%), Gaps = 13/311 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ L+ + K G+ A +F M G +P+ + Y L+ + AL +
Sbjct: 303 DVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYA----TKGALVEM 358
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
G M G+ PN ++IL+ A A+ VDQ +F ++ + L PD TY V
Sbjct: 359 HGLLDLMVRNGIH---PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ K+G +++ +M + P I +N LI S +DK +++ ++
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
FNS+I ++ K ++E +F M + P ITY +I Y + A +
Sbjct: 476 CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 535
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL----LY 437
+ + +G T N ++ YC +A +LF + GV+PD TY + L+
Sbjct: 536 LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF 595
Query: 438 KAYTKANMKEL 448
+ A KEL
Sbjct: 596 QTRRTAAAKEL 606
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 88/195 (45%), Gaps = 13/195 (6%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS LI G+ A L + M + G +PD YN LI + K + A
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC----KISRMEDA 568
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L F++M+ P+I+TYNI+L+ Q R L+ + ES ++ TYN ++
Sbjct: 569 LVLFREMES-SGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILH 627
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDII----TFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
KN + E RM N C D+ TFN++I + K D+ + +F +L +
Sbjct: 628 GLCKNNLTDEA----LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 683
Query: 320 KEKPTLPTFNSMIIN 334
P + T++ M N
Sbjct: 684 GLVPDVRTYSLMAEN 698
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 89/210 (42%), Gaps = 15/210 (7%)
Query: 278 LSRMKSNQCKPDIITFNLLIDS---YGKRQ-AFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
++R +++ P++ T+ +LI S G+ F + V K P +
Sbjct: 79 MARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCA 138
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
+ R + V ++MT + P+ +Y I + G CD +R++E + L + D
Sbjct: 139 D---KRTSDAMDIVLRRMTQLGCIPNVFSYN--ILLKGLCDE-NRSQEALELLQMMPDDG 192
Query: 394 KVSTLNAMLEAYCMNGLPTEADL--LFENSHNM---GVTPDSSTYKLLYKAYTKANMKEL 448
+ + +NG E DL + H M G+ P+ TY + A KA +
Sbjct: 193 GDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDK 252
Query: 449 VQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
++L M +NG++PN R + + + SS
Sbjct: 253 AMEVLTSMVKNGVMPNCRTYNSIVHGYCSS 282
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 22/198 (11%)
Query: 100 LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG 159
+N Y K+ R E +LF E+ S D Y+ ++ + +
Sbjct: 556 INGYCKISRMEDALVLFREMESS-----------------GVSPDIITYNIILQGLFQTR 598
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
+T A L+ + SG + + S YN + LH K +AL FQ + + +
Sbjct: 599 RTAAAKELYVGITESGTQLELSTYNII----LHGLCKNNLTDEALRMFQNL-CLTDLQLE 653
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
T+NI++ A + D+ LF L + L PD+ TY+ + + + G+++E++ +
Sbjct: 654 TRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFL 713
Query: 280 RMKSNQCKPDIITFNLLI 297
M+ N C + N ++
Sbjct: 714 SMEENGCTANSRMLNSIV 731
>gi|449438016|ref|XP_004136786.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Cucumis sativus]
Length = 707
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 172/381 (45%), Gaps = 34/381 (8%)
Query: 117 EELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGC 176
+EL + C++VF WM+ QR Y A IY+ +I + + + A LF EM+ C
Sbjct: 2 KELTQIGSIEHCVQVFDWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKWRC 61
Query: 177 RPDPSVYNALITAHLH---------------------TRDKAKALAKALGYFQKMK-GME 214
+PD YNALI AH +R L A G + +
Sbjct: 62 KPDVETYNALINAHGRAGQWRWATNIMEDMLRAAIPPSRSTFNNLINACGSCGNWREALR 121
Query: 215 RCK--------PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
CK P++VT+NI+L A + + F+ + + + PD T N V+
Sbjct: 122 VCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHCLI 181
Query: 267 KNGMIKEMESVLSRM--KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
K + + S M K ++C+PD++TF +I Y R + + VF +++ KP
Sbjct: 182 KVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPN 241
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ ++N++I Y + +A VF +M + P ++Y +I+ +G +RARE+FD
Sbjct: 242 IVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQPARAREVFD 301
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNG-LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ + + + NA+++AY NG LP D+L E + G+ P+ + L A +
Sbjct: 302 MMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQD-GIHPNVVSICTLLAACGRF 360
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
K + +L E GI N
Sbjct: 361 GQKVNIDSVLSAAELRGIHLN 381
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 145/323 (44%), Gaps = 7/323 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ LI G G R A+ + +M ++G PD +N +++A+ +KAL YF
Sbjct: 103 FNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAY----KSGAQYSKALSYF 158
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE--SILAPDIYTYNGVMDAY 265
+ MKG +P+ T NI++ + + Q +F + E S PD+ T+ ++ Y
Sbjct: 159 ELMKG-TNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLY 217
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
G I++ ++V S M + KP+I+++N LI +Y + VF + S P +
Sbjct: 218 SVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDV 277
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
++ S+I +G+++ +A VF M K P+ ++Y ++ YG + +A +I E
Sbjct: 278 VSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILRE 337
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ + G V ++ +L A G D + + G+ ++ +Y
Sbjct: 338 MEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGE 397
Query: 446 KELVQKLLKRMEQNGIVPNKRFF 468
E L + ME P+ F
Sbjct: 398 YEKAINLYRSMENKTTKPDSVTF 420
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 150/352 (42%), Gaps = 24/352 (6%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLI------AVMGKKGQTRLAMWLF 168
L G W + L V + M D G+ L+ + Q A+ F
Sbjct: 106 LINACGSCGNWREALRVCKKM-------TDNGVGPDLVTHNIVLSAYKSGAQYSKALSYF 158
Query: 169 SEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK-GMERCKPNIVTYNILL 227
M+ + RPD + N +I H K K +A+ F M+ C+P++VT+ ++
Sbjct: 159 ELMKGTNIRPDTTTLNIVI----HCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSII 214
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
+ ++ A+F + + P+I +YN ++ AY +GM KE SV MK +
Sbjct: 215 HLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFC 274
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
PD++++ LI ++G+ Q + +VF + +K KP L ++N+++ YG +A +
Sbjct: 275 PDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDI 334
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL---GKDMKVSTLNAMLEA 404
++M P+ ++ I T+ C + I LS G + N+ + +
Sbjct: 335 LREMEQDGIHPNVVS---ICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGS 391
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
Y G +A L+ + N PDS T+ +L + + E K M
Sbjct: 392 YMNIGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEM 443
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 148/329 (44%), Gaps = 5/329 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI+ G + A +F EM+ SG PD Y +LI+ T +++ A+A F
Sbjct: 245 YNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLIS----TFGRSQQPARAREVF 300
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
MK +CKPN+V+YN L+ A + Q + +E+ + + P++ + ++ A G+
Sbjct: 301 DMMK-RNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDGIHPNVVSICTLLAACGR 359
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G ++SVLS + + I N I SY ++K +++S+ + KP T
Sbjct: 360 FGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKAINLYRSMENKTTKPDSVT 419
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
F +I + +A F++M ++ S Y +I Y + +A +F+ L
Sbjct: 420 FTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSMICAYSKQGQLVKAESLFNSLK 479
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G + T AM+ AY + + + L++ + DS L KA+ K N
Sbjct: 480 GSGCCPDLVTYTAMINAYSASEMWEKVCALYQEMEANNIQLDSIACSALMKAFNKGNQAS 539
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFS 476
V L + M++ GI N F E L S
Sbjct: 540 NVLILAEIMKEKGIPFNDANFFEMLSACS 568
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 122/293 (41%), Gaps = 37/293 (12%)
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM------------ 270
YN+++R A+ +DQ LF E+ + PD+ TYN +++A+G+ G
Sbjct: 33 YNMMIRLHARHNRIDQARGLFFEMQKWRCKPDVETYNALINAHGRAGQWRWATNIMEDML 92
Query: 271 -----------------------IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
+E V +M N PD++T N+++ +Y +
Sbjct: 93 RAAIPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYS 152
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT--PSFITYEC 365
K F+ + + +P T N +I K + G+A +F M + P +T+
Sbjct: 153 KALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTS 212
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
II +Y + + +F + G + + NA++ AY +G+ EA +F+ G
Sbjct: 213 IIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSG 272
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
PD +Y L + ++ +++ M++N PN + ++ + S+
Sbjct: 273 FCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSN 325
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/388 (19%), Positives = 158/388 (40%), Gaps = 39/388 (10%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L G+S + + EVF M++ + + Y+ L+ G G A+ + EM
Sbjct: 283 LISTFGRSQQPARAREVFDMMKRNKCK-PNLVSYNALMDAYGSNGYLPQAVDILREMEQD 341
Query: 175 GCRPDPSVYNALITA----------------------HLHTRDKAKALA---------KA 203
G P+ L+ A HL+T A+ KA
Sbjct: 342 GIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKA 401
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ ++ M+ + KP+ VT+ IL+ C + ++ FKE+ + + Y+ ++
Sbjct: 402 INLYRSMEN-KTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSMIC 460
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
AY K G + + ES+ + +K + C PD++T+ +I++Y + ++K+ +++ + + +
Sbjct: 461 AYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEMEANNIQL 520
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
++++ + K Q + ++ K P M C + R+
Sbjct: 521 DSIACSALMKAFNKGN-QASNVLILAEIMKEKGIP--FNDANFFEMLSACSILRDWRKAT 577
Query: 384 DELSKLGKD---MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
D ++ + + + T+N +L+ +G LF +G + + +TY +L K
Sbjct: 578 DLINLMEPSFHLVSLGTINHLLQFLGKSGKTEIMIKLFYRFVALGSSVNINTYSILLKNL 637
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFF 468
A ++L+ M GI P+ +
Sbjct: 638 LSAGKWRKYIEVLQWMNDAGIQPSHAMY 665
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 102/239 (42%), Gaps = 2/239 (0%)
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN ++ + ++ I + + M+ +CKPD+ T+N LI+++G+ + + + ++
Sbjct: 33 YNMMIRLHARHNRIDQARGLFFEMQKWRCKPDVETYNALINAHGRAGQWRWATNIMEDML 92
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
+ P+ TFN++I G +A V +KMT P +T+ +++ Y S
Sbjct: 93 RAAIPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYS 152
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN--SHNMGVTPDSSTYKL 435
+A F+ + +TLN ++ +A +F + PD T+
Sbjct: 153 KALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTS 212
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTRS 494
+ Y+ E + + M GI PN + + ++S ++ S ++ RS
Sbjct: 213 IIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRS 271
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 103/251 (41%), Gaps = 41/251 (16%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH-----------LHTRD 195
IYS +I K+GQ A LF+ ++ SGC PD Y A+I A+ L+
Sbjct: 454 IYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEM 513
Query: 196 KAK----------ALAKA------------LGYFQKMKGMERCKPNIVTYNILLRACAQA 233
+A AL KA L K KG+ N +L AC+
Sbjct: 514 EANNIQLDSIACSALMKAFNKGNQASNVLILAEIMKEKGIPFNDANFFE---MLSACSIL 570
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
R+ + L + S + T N ++ GK+G + M + R + +I T+
Sbjct: 571 RDWRKATDLINLMEPSFHLVSLGTINHLLQFLGKSGKTEIMIKLFYRFVALGSSVNINTY 630
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY--VFQKM 351
++L+ + + K +V + + + +P+ +N+++ A+ G AEY V ++
Sbjct: 631 SILLKNLLSAGKWRKYIEVLQWMNDAGIQPSHAMYNNILF---FAQHCGDAEYAAVIKER 687
Query: 352 TAMKYTPSFIT 362
M+ S I+
Sbjct: 688 VGMRLCISLIS 698
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 152/305 (49%), Gaps = 7/305 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI+ ++G R A +F EM+ +G PD +N+L+ + KA+ +A
Sbjct: 254 DRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVY----GKARKHEEA 309
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+G ++M+ C P++VTYN L+ A + +++ L +E+ + PD+ TY ++
Sbjct: 310 IGVLKRMENAG-CTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLIS 368
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ G I + S M N C P++ T+N LI +G R F +M VF L + P
Sbjct: 369 GLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVP 428
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T+N+++ +G+ L + VF++M Y P TY +I+ Y C +A EI+
Sbjct: 429 DVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIY 488
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ + G +ST NA+L A G +A+ LF + PD +Y L AY A
Sbjct: 489 KRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAY--A 546
Query: 444 NMKEL 448
N K+L
Sbjct: 547 NAKKL 551
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 150/321 (46%), Gaps = 4/321 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ L++ + G+ R A+ +F M + G +P YN + A+ K + A
Sbjct: 183 DASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVV-A 241
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L K G+ER + TYN L+ C + + +F E+ + PD T+N ++D
Sbjct: 242 LVDSMKEDGIERDR---YTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLD 298
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
YGK +E VL RM++ C P ++T+N LI +Y K ++ ++ + + KP
Sbjct: 299 VYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKP 358
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T+ ++I + A + +M +P+ TY +I ++G + +F
Sbjct: 359 DVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVF 418
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
D+L G V T N +L + NGL +E +F+ G P+ TY L +Y++
Sbjct: 419 DDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRC 478
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+ + ++ KRM + GI P+
Sbjct: 479 GLFDQAMEIYKRMIEAGIYPD 499
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 148/300 (49%), Gaps = 6/300 (2%)
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ-ARNV 236
PD S Y AL++A +A A+ FQ+M +P +VTYN++ A ++ +
Sbjct: 182 PDASAYTALVSAF----SRAGRFRDAVAVFQRMVD-GGVQPALVTYNVVFHAYSKMSVPW 236
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
+V AL + E + D YTYN ++ + G+ +E V MK+ +PD +TFN L
Sbjct: 237 KEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSL 296
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
+D YGK + ++ V K + ++ P++ T+NS+I Y K L +A + Q+M
Sbjct: 297 LDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGM 356
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
P +TY +I+ + A + E+ + G + T NA+++ + + G TE
Sbjct: 357 KPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMA 416
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+F++ + G PD T+ L + + + V + K M++ G +P + ++ + ++S
Sbjct: 417 VFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYS 476
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 162/415 (39%), Gaps = 81/415 (19%)
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
FR M+ D Y+ LI+ + + G+ A+ +SEM +GC P+ YNALI H
Sbjct: 353 FRGMK------PDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLH- 405
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH---- 247
R K + + F ++ P++VT+N LL Q +V+ +FKE+
Sbjct: 406 GVRGK---FTEMMAVFDDLRSAGYV-PDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGY 461
Query: 248 -------------------------------ESILAPDIYTYNGVMDAYGKNGMIKEMES 276
E+ + PDI TYN V+ A + G ++ E
Sbjct: 462 IPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEK 521
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM--------------------------- 309
+ + M CKPD ++++ L+ +Y + DKM
Sbjct: 522 LFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNN 581
Query: 310 --------EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
E+ F+ L + + N+M+ YGK ++ K E V M S
Sbjct: 582 KVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAA 641
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
TY ++ MY + + I E+ G + N ++ AY G EA LF
Sbjct: 642 TYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEM 701
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
GV PD TY + K+Y M E L++ + G PN+R F L+ +S
Sbjct: 702 KCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYS 756
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 143/316 (45%), Gaps = 14/316 (4%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VF+ M+K YI + Y LI+ + G AM ++ M +G PD S YNA+++A
Sbjct: 452 VFKEMKKA-GYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSA- 509
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
+ +A F +M + CKP+ ++Y+ LL A A A+ +D++ K L E I
Sbjct: 510 ---LARGGRWEQAEKLFAEMVDRD-CKPDELSYSSLLHAYANAKKLDKM----KTLSEDI 561
Query: 251 LAPDIYTYNGVMDAY----GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
A I +N ++ K + E E ++ +C DI N ++ YGK +
Sbjct: 562 YAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMV 621
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
K+E+V +M + + T+NS++ Y + K E + ++ + P +Y +
Sbjct: 622 KKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTV 681
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I YG + A +F E+ G + T N +++Y N + EA L G
Sbjct: 682 IYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGC 741
Query: 427 TPDSSTYKLLYKAYTK 442
P+ T+ + + Y++
Sbjct: 742 RPNERTFNSILQGYSR 757
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 106/239 (44%), Gaps = 5/239 (2%)
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+R A+A + + +A+ E+ APD Y ++ A+ + G ++ +V RM
Sbjct: 160 IRVFARAGCLAEASAIL----EAAPAPDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGV 215
Query: 287 KPDIITFNLLIDSYGKRQA-FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
+P ++T+N++ +Y K + ++ + S+ + T+N++I + L +A
Sbjct: 216 QPALVTYNVVFHAYSKMSVPWKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAA 275
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
VF +M A + P +T+ ++ +YG A + + G V T N+++ AY
Sbjct: 276 QVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAY 335
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+GL EA L + G+ PD TY L + + M +NG PN
Sbjct: 336 VKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPN 394
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + + G + +E+++SG RPD YN +I A+ + + +A F
Sbjct: 643 YNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAY----GRKGQMKEASRLF 698
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+MK KP+IVTYNI +++ ++ L + L P+ T+N ++ Y +
Sbjct: 699 SEMK-CSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYSR 757
Query: 268 NGMIKEMESVLSRM 281
+G + E +S LS +
Sbjct: 758 HGRMVEAKSFLSNL 771
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 166/373 (44%), Gaps = 12/373 (3%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ LGK K + + K + + D Y+ LI G+ R A+ +F +M
Sbjct: 3 VIISMLGKEGKVSVAASLLNDLHKDGFGL-DVYAYTSLITACVSNGRYREAVMVFKKMEE 61
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
GC+P YN ++ + K G F+ MK P+ TYN L+ C +
Sbjct: 62 EGCKPTLITYNVILNVY---GKMGMPWNKIKGLFEGMKN-AGVLPDEYTYNTLITCCRRG 117
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
++ A+FK++ PD TYN ++D YGK+ KE VL M+ N C P I+T+
Sbjct: 118 SLHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTY 177
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N LI +Y + + ++ ++ + T+ +++ + +A A VF +M A
Sbjct: 178 NSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRA 237
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P+ T+ +I M+G + ++F+E+ + T N +L + NG+ +E
Sbjct: 238 AGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSE 297
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
+F+ G P+ TY L AY++ + + KRM + GI P+ L
Sbjct: 298 VSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPD-------LS 350
Query: 474 TFSSSLAGSQSGS 486
T+++ LA G
Sbjct: 351 TYNAVLAALARGG 363
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 174/404 (43%), Gaps = 79/404 (19%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ L++ + G+ AM +F+EMR +GC+P+ +NALI H R K A+
Sbjct: 208 DVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMH-GNRGK---FAEM 263
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH---------------- 247
+ F+++K C P+IVT+N LL Q +V+ +FKE+
Sbjct: 264 MKVFEEIKN-SCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLIS 322
Query: 248 -------------------ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
E+ + PD+ TYN V+ A + G+ ++ E + + MK +CKP
Sbjct: 323 AYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKP 382
Query: 289 DIITFNLLIDSYGKRQAFDKM-----------------------------------EQVF 313
+ +T+ L+ +Y + +M E F
Sbjct: 383 NELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAF 442
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
L P L T N+M+ YG+ ++ K + M +TPS TY ++ M+
Sbjct: 443 LELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRS 502
Query: 374 DNVSRAREIFDELSKLGKDMKVSTL--NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+N R+ E+ E+ L K +K T+ N ++ AYC NG EA +F G+ PD
Sbjct: 503 ENFERSEEVLKEI--LAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVI 560
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
TY +Y +M E +++ M ++G PN+ + ++ +
Sbjct: 561 TYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGY 604
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 175/350 (50%), Gaps = 11/350 (3%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
W + +F M K + D Y+ LI + A +F +M++ G PD YN
Sbjct: 85 WNKIKGLFEGM-KNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYN 143
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
AL+ + K++ +A+ ++M+ + C P+IVTYN L+ A A+ + + L
Sbjct: 144 ALLDVY----GKSRRTKEAMEVLREME-VNGCSPSIVTYNSLISAYARDGLLKEAMELKN 198
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
++ E + D++TY ++ + + G + V + M++ CKP+I TFN LI +G R
Sbjct: 199 QMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRG 258
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
F +M +VF+ + +S P + T+N+++ +G+ + + VF++M + P TY
Sbjct: 259 KFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYN 318
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
+I+ Y C + +A +I+ + + G +ST NA+L A GL +++ +F +
Sbjct: 319 TLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDG 378
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ--NGIVPNKRFFLEAL 472
P+ TY L AY AN KE + ++L E+ +G++ L+ L
Sbjct: 379 RCKPNELTYCSLLHAY--ANGKE-IGRMLALAEEICSGVIEPHAVLLKTL 425
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 155/326 (47%), Gaps = 24/326 (7%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VF+ M K+ ++ + Y+ LI+ + G AM ++ M +G PD S YNA++ A
Sbjct: 301 VFKEM-KRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAA- 358
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
+ ++ F +MK RCKPN +TY LL A A + + ++ AL +E+ +
Sbjct: 359 ---LARGGLWEQSEKIFAEMKD-GRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGV 414
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
+ P ++ K ++ E E +K PD+ T N ++ YG+RQ F K
Sbjct: 415 IEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTN 474
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
++ + S P+L T+NS++ + ++ ++E V +++ A P I+Y +I +
Sbjct: 475 EILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVI--F 532
Query: 371 GYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM---- 424
YC N + A IF E+ + G V T N + +Y AD +FE++ ++
Sbjct: 533 AYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYA-------ADSMFEDAIDVVRYM 585
Query: 425 ---GVTPDSSTYKLLYKAYTKANMKE 447
G P+ +TY + Y K N ++
Sbjct: 586 IKHGCKPNQNTYNSVVDGYCKHNHRD 611
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 124/277 (44%), Gaps = 1/277 (0%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM-IKEMESV 277
++ Y L+ AC + +FK++ E P + TYN +++ YGK GM +++ +
Sbjct: 32 DVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKIKGL 91
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
MK+ PD T+N LI + ++ VFK + P T+N+++ YGK
Sbjct: 92 FEGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGK 151
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
+R +A V ++M +PS +TY +I+ Y + A E+ +++ + G ++ V T
Sbjct: 152 SRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFT 211
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
+L + G A +F G P+ T+ L K + + K+ + ++
Sbjct: 212 YTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIK 271
Query: 458 QNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTRS 494
+ VP+ + L F + S+ ++ R+
Sbjct: 272 NSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA 308
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 161/326 (49%), Gaps = 3/326 (0%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
A +++ ++ V + G+ A L M + G PD +N LI A + A +A
Sbjct: 219 ATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVAL 278
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
L + + G+ +P+++TYN L+ AC+Q+ N++ +F+++ S PD++TYN ++
Sbjct: 279 DLLFEVRQSGL---RPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMV 335
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+G+ G +E E + + PD IT+N L+ ++ K DK+E + L+ + K
Sbjct: 336 SVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFK 395
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
T+N+MI YGK A ++ +M AM TP +TY +I G + ++ A ++
Sbjct: 396 KNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKV 455
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
++++ G + +A++ AY G +A+ F+ GV PD Y ++ + +
Sbjct: 456 LEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFAR 515
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFF 468
+ E + L ++M + P+ +
Sbjct: 516 SGDTEKMLCLYRKMMNDNYRPDDDMY 541
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 174/358 (48%), Gaps = 15/358 (4%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
W + L+ F W+ + + + ++ V+G+ Q +A +F +R +G V+N
Sbjct: 170 WRRALDAFEWLARSS--APASRAVAVVLGVLGRARQDSIAEEVF--LRFAGEGATVQVFN 225
Query: 185 ALITAHLHTR--DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL 242
A++ + + D A+ L + +G++ P++V++N L+ A +++ + AL
Sbjct: 226 AMMGVYARSGRFDDARQLLDTM----HDRGID---PDLVSFNTLINARSKSGCLAAGVAL 278
Query: 243 --FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
E+ +S L PD+ TYN ++ A ++ +++ +V M +++C+PD+ T+N ++ +
Sbjct: 279 DLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVH 338
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
G+ ++ E++F+ L+ P T+NS++ + K K E+ +++ + +
Sbjct: 339 GRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNE 398
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
ITY +I MYG + A ++DE+ +G T M+++ EA + E+
Sbjct: 399 ITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLED 458
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ G+ P + L AY K + + M +G+ P++ +L L+ F+ S
Sbjct: 459 MTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARS 516
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 171/391 (43%), Gaps = 44/391 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ E GK W Q + + +++ D I++ LI + G A +F M
Sbjct: 751 IIIEAYGKIKLWQQAEILVKGLRQASGI--DRRIWNALIHAYAESGLYEKARAVFDNMIK 808
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
+G P N ++ A L + L + Q M K + T +LL A A+A
Sbjct: 809 TGPLPTVDSVNGMMRA-LIVDGRLDELYVVVEELQDMN----FKISKSTVLLLLDAFAKA 863
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+V +V ++ + + P+++ Y ++ + +++E +++ M+ KPD+
Sbjct: 864 GDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAIL 923
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY------------------ 335
N L++ Y FD+ QV++S++ + +P T+N++I+ Y
Sbjct: 924 NALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGK 983
Query: 336 -----------------GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
KA L+ +A+ +F++M + Y + Y ++ +Y N S+
Sbjct: 984 RGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSK 1043
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A + + + G + ++T++ ++ +Y G P EA+ + N + + + Y ++
Sbjct: 1044 AENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFD 1103
Query: 439 AYTK-ANMKELVQKLLKRMEQNGIVPNKRFF 468
AY K + KLL+ M+++G+ P+ + +
Sbjct: 1104 AYLKNGDYNHGTTKLLE-MKRDGVEPDHQVW 1133
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 132/318 (41%), Gaps = 23/318 (7%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKA---- 199
D Y+ +++V G+ G+ A LF E+ G PD YN+L+ A + K
Sbjct: 327 DLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTC 386
Query: 200 --LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
L KA G+ K N +TYN ++ + +D L+ E+ PD T
Sbjct: 387 EQLVKA-GF----------KKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVT 435
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y ++D+ GK I E VL M KP +I F+ LI +Y K E F ++
Sbjct: 436 YTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMI 495
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
S KP + M+ + ++ K +++KM Y P Y+ ++ D
Sbjct: 496 ASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCE 555
Query: 378 RAREIFDELSKLGKDMKVSTLNAML-EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
E+ ++ L + M + ++ ML +A C+ ++ L + + G PD + + +
Sbjct: 556 EIEEVIQDMELLCR-MNLGIISTMLIKARCV----SQGAKLLKKACLQGYKPDIKSLRSI 610
Query: 437 YKAYTKANMKELVQKLLK 454
AY E LL+
Sbjct: 611 MNAYVMTEKHEEGLSLLE 628
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 129/316 (40%), Gaps = 22/316 (6%)
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA-RNVDQVNALFKELHESILAP 253
D A+A + + + G + + + L R+ A A R V V + + +A
Sbjct: 149 DGARASPDEVAFVVRAVGESSWRRALDAFEWLARSSAPASRAVAVVLGVLGRARQDSIAE 208
Query: 254 DIY-----------TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
+++ +N +M Y ++G + +L M PD+++FN LI++ K
Sbjct: 209 EVFLRFAGEGATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSK 268
Query: 303 RQ------AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
A D + +V +S + +P + T+N++I ++ A VF+ M A +
Sbjct: 269 SGCLAAGVALDLLFEVRQSGL----RPDVITYNTLISACSQSSNLEDAVTVFEDMIASEC 324
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
P TY +++++G C A +F EL + G T N++L A+ G + +
Sbjct: 325 RPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEH 384
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
E G + TY + Y K +L L M G P+ + +++
Sbjct: 385 TCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLG 444
Query: 477 SSLAGSQSGSAKTDLT 492
+++G D+T
Sbjct: 445 KMNRIAEAGKVLEDMT 460
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 151/354 (42%), Gaps = 47/354 (13%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I + GK G+ LA+ L+ EMR GC PD Y +I + K +A+A
Sbjct: 401 YNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMID----SLGKMNRIAEAGKVL 456
Query: 208 QKMKGMERCKPNIVTYNILLRACAQA-RNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+ M KP ++ ++ L+ A A+ R D N F + S + PD Y ++D +
Sbjct: 457 EDMTD-AGLKPTLIAFSALICAYAKGGRRADAENT-FDCMIASGVKPDRLAYLVMLDVFA 514
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
++G ++M + +M ++ +PD + +L+ + K +++E+V + M + L
Sbjct: 515 RSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQD-MELLCRMNLG 573
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY--------------GY 372
++M+I KAR + + +K Y P + I+ Y
Sbjct: 574 IISTMLI---KARCVSQGAKLLKKACLQGYKPDIKSLRSIMNAYVMTEKHEEGLSLLECI 630
Query: 373 CDNVSRAREIFDELSKLGKDMKVSTLNAM-----------------LEAYCMNGLP---- 411
C++VS ++++ E S + K ++++A L Y + L
Sbjct: 631 CEHVSFSQDLISECSIMLLCRKQTSISAYEQYSQRLMLKYPDQNCNLYEYLITCLIEAEF 690
Query: 412 -TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+EA +F + +G+ S Y+ + Y K E +L+ Q+GI N
Sbjct: 691 FSEACQVFCDMQFIGIEASKSIYESIISTYCKLGFPETAHRLMDDALQSGIPLN 744
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 137/335 (40%), Gaps = 15/335 (4%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT---RDKAKALAKALGYF 207
L+ K G M +++ M+ +G P+ +Y ++I+ H RD +A+ G
Sbjct: 856 LLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEG-- 913
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
G KP++ N LL A N D+ +++ + E+ L PD TYN ++ Y +
Sbjct: 914 ---AGF---KPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCR 967
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ +E ++L+ M P + ++ L+ + K + ++ +Q+F+ + +
Sbjct: 968 SFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSI 1027
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
++ M+ Y A KAE + M P+ T ++T YG A + + L
Sbjct: 1028 YHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLK 1087
Query: 388 KLGKDMKVSTL--NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
++VSTL + + +AY NG GV PD + +A +
Sbjct: 1088 S--SSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAASLCEQ 1145
Query: 446 KELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLA 480
LLK ++ G R E + S +A
Sbjct: 1146 TADAILLLKSLQDCGFDLPIRLLTERTPSLLSEIA 1180
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 106/258 (41%), Gaps = 8/258 (3%)
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
I++ A + + Q L K L ++ D +N ++ AY ++G+ ++ +V M
Sbjct: 751 IIIEAYGKIKLWQQAEILVKGLRQAS-GIDRRIWNALIHAYAESGLYEKARAVFDNMIKT 809
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
P + + N ++ + D++ V + L K + T ++ + KA +
Sbjct: 810 GPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEV 869
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
++ M A Y P+ Y +I++ + + + E+ G ++ LNA+L
Sbjct: 870 MKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNM 929
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y G ++ + G+ PD TY L Y ++ E LL M + G+ P
Sbjct: 930 YTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPK 989
Query: 465 KRFFLEALETFSSSLAGS 482
L+++ S LA S
Sbjct: 990 -------LQSYKSLLAAS 1000
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 158/323 (48%), Gaps = 5/323 (1%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
++ +G++ L +V + G A FS MRN P N L LH K+
Sbjct: 157 VSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFL----LHRLSKSGNGQ 212
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+F M G P++ TYN+++ + +++ LF ++ E L+PD+ TYN +
Sbjct: 213 LVRKFFNDMIG-AGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSL 271
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+D YGK G ++E+ S+ + MK C PDIIT+N LI+ Y K + + + F + ++
Sbjct: 272 IDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGL 331
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
KP + T++++I + K + A + M P+ TY +I N++ A +
Sbjct: 332 KPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWK 391
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ +++ + G + + T A+L+ C G EA+ +F + G++P+ Y L Y
Sbjct: 392 LLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYI 451
Query: 442 KANMKELVQKLLKRMEQNGIVPN 464
KA E K+LK+M + I P+
Sbjct: 452 KAERMEDAMKILKQMTECNIKPD 474
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 148/323 (45%), Gaps = 9/323 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI GK G LF+EM++ GC PD YN LI + K + + +A
Sbjct: 264 DVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYC----KFEKMPRA 319
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
YF +MK KPN+VTY+ L+ A + + L ++ + L P+ +TY ++D
Sbjct: 320 FEYFSEMKN-NGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLID 378
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
A K G + E +L+ M K +I+T+ L+D K + E+VF+S++ P
Sbjct: 379 ANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISP 438
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRARE 381
+ +++ Y KA A + ++MT P I Y II +G+C + +
Sbjct: 439 NQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSII--WGHCSQRKLEETKL 496
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
I +E+ G +++AY G ++A F+ ++GV TY +L
Sbjct: 497 ILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLC 556
Query: 442 KANMKELVQKLLKRMEQNGIVPN 464
+A + EL RM G+ PN
Sbjct: 557 EAGIVELAVDYFCRMLSLGLQPN 579
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 146/354 (41%), Gaps = 42/354 (11%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS LI K+G + A+ L +MR +G P+ Y +LI A+ KA L +A
Sbjct: 338 YSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANC----KAGNLTEAWKLL 393
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
M K NIVTY LL +A + + +F+ + + ++P+ Y ++ Y K
Sbjct: 394 NDML-QAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIK 452
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+++ +L +M KPD+I + +I + ++ ++ + + + M S+ P
Sbjct: 453 AERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEE-MKSRGISANPV 511
Query: 328 FNSMIIN-YGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT------------------ 368
++ II+ Y KA A FQ+M + + +TY +I
Sbjct: 512 ISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRM 571
Query: 369 ---------------MYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+ G C N + A+++FDE+ G ++ A+++ +G
Sbjct: 572 LSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNL 631
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
EA +L + + D Y L +++ +K M + GI+P +
Sbjct: 632 QEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEE 685
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 104/249 (41%)
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
C +++L + +++ N F + P + N ++ K+G + +
Sbjct: 156 CVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVR 215
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
+ M P + T+N++ID K + ++F + P + T+NS+I Y
Sbjct: 216 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 275
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
GK + +F +M + P ITY +I Y + + RA E F E+ G V
Sbjct: 276 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 335
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
T + +++A+C G+ A L + G+ P+ TY L A KA KLL
Sbjct: 336 VTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 395
Query: 456 MEQNGIVPN 464
M Q G+ N
Sbjct: 396 MLQAGVKLN 404
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 82/190 (43%), Gaps = 8/190 (4%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K R A+ I + +I K G++ A+ F EM++ G Y LI +
Sbjct: 502 KSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLC----E 557
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
A + A+ YF +M + +PN+ Y L+ ++ LF E+ + PDI
Sbjct: 558 AGIVELAVDYFCRMLSLG-LQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDIT 616
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+ ++D K+G ++E ++SRM + D+ + L+ + + + + F +
Sbjct: 617 AFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEM 676
Query: 317 MHSKEKPTLP 326
+ EK LP
Sbjct: 677 I---EKGILP 683
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 83/213 (38%), Gaps = 4/213 (1%)
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
N C F++L + + ++ + F + + + P + N ++ K+
Sbjct: 154 NICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQL 213
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
F M PS TY +I ++ +R +F ++ ++G V T N++++
Sbjct: 214 VRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLID 273
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
Y G E LF ++G PD TY L Y K + M+ NG+ P
Sbjct: 274 GYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKP 333
Query: 464 NKRFFLEALETFSSSLAGSQSGSAK--TDLTRS 494
N + ++ F G G+ K D+ R+
Sbjct: 334 NVVTYSTLIDAFCKE--GMMQGAIKLLXDMRRT 364
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 168/395 (42%), Gaps = 75/395 (18%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ L++ K G+ A+ +F EMR GC+P+ +NALI H R K A+
Sbjct: 368 DVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMH-GNRGK---FAEM 423
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH---------------- 247
+ F +K + C P+IVT+N LL Q QV+ +FKE+
Sbjct: 424 MKVFDDIK-LCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLIS 482
Query: 248 -------------------ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
E+ + PD+ TYN V+ A + G+ ++ E VL+ M+ +CKP
Sbjct: 483 AYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKP 542
Query: 289 DIITFNLLIDSYGKRQAFDKM-----------------------------------EQVF 313
+ ++++ L+ +Y + ++M E+ F
Sbjct: 543 NELSYSSLLHAYANGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIETERAF 602
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
L P + T N+M+ YG+ ++ KA + M ++TPS TY ++ MY
Sbjct: 603 LELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRS 662
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+N ++ EI E+ + G + N ++ AYC NG EA +F + + PD TY
Sbjct: 663 ENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTY 722
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
Y +M +++ M + G P++ +
Sbjct: 723 NTFIATYAADSMFAEAIDVVRYMIKQGCKPDQNTY 757
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 180/393 (45%), Gaps = 18/393 (4%)
Query: 97 VRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMG 156
VRT N + S ++ + LGK+ + + +Q +I D Y+ LI
Sbjct: 146 VRTNNSNTNLFSSSAIPVIIKILGKAGRVSSAASLLLALQNDGVHI-DVYAYTCLINAYS 204
Query: 157 KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR---DKAKALAKALGYFQKMKGM 213
G+ R A+ LF++M+ GC P YN ++ + AL +A+ + +G+
Sbjct: 205 SSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSNVTALVEAM----RSRGV 260
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
P++ TYN L+ C + ++ LF+++ PD TYN ++D +GK+ +E
Sbjct: 261 ---APDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQE 317
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
VL M++N P +T+N LI +Y K ++ + ++H KP + T+ +++
Sbjct: 318 AMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLS 377
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
+ KA A VF +M A+ P+ T+ +I M+G + ++FD++
Sbjct: 378 GFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSP 437
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
+ T N +L + NG+ ++ +F+ G + T+ L AY++ + +
Sbjct: 438 DIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVY 497
Query: 454 KRMEQNGIVPNKRFFLEALETFSSSLAGSQSGS 486
K M + G+VP+ L T+++ LA G
Sbjct: 498 KSMLEAGVVPD-------LSTYNAVLAALARGG 523
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 176/386 (45%), Gaps = 41/386 (10%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + GKS + + ++V + M+ + + Y+ LI+ K G A+ L ++M +
Sbjct: 305 LLDVFGKSRRPQEAMKVLQEMEAN-GFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHK 363
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G +PD Y L++ +KA A+ F +M+ + CKPNI T+N L++
Sbjct: 364 GIKPDVFTYTTLLSGF----EKAGKDDFAIQVFLEMRAVG-CKPNICTFNALIKMHGNRG 418
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
++ +F ++ +PDI T+N ++ +G+NGM ++ + MK + TFN
Sbjct: 419 KFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFN 478
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
LI +Y + +FD+ V+KS++ + P L T+N+++ + L ++E V +M
Sbjct: 479 TLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDG 538
Query: 355 KYTPSFITYECIITMYGYCDNVSR----AREI---------------------------- 382
+ P+ ++Y ++ Y + R A EI
Sbjct: 539 RCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIET 598
Query: 383 ---FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
F EL + G ++TLNAML Y + +A + H TP +TY L
Sbjct: 599 ERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYM 658
Query: 440 YTKANMKELVQKLLKRMEQNGIVPNK 465
Y+++ + +++L+ + + G+ P++
Sbjct: 659 YSRSENFQKSEEILREVLEKGMKPDR 684
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 157/349 (44%), Gaps = 20/349 (5%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L G++ Q +F+ M K+ ++A+ ++ LI+ + G AM ++ M +
Sbjct: 445 LLAVFGQNGMDSQVSGIFKEM-KRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEA 503
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME-----RCKPNIVTYNILLRA 229
G PD S YNA++ A LA+ + Q K + RCKPN ++Y+ LL A
Sbjct: 504 GVVPDLSTYNAVLAA----------LARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHA 553
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
A + ++++NA +E++ + ++ K+ ++ E E ++ PD
Sbjct: 554 YANGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPD 613
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
I T N ++ YG++Q K ++ + ++ P+L T+NS++ Y ++ K+E + +
Sbjct: 614 ITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILR 673
Query: 350 KMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
++ P I+Y +I Y YC N + A IF E+ V T N + Y
Sbjct: 674 EVLEKGMKPDRISYNTVI--YAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYAA 731
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
+ + EA + G PD +TY + Y K + + +K +
Sbjct: 732 DSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDWYCKLDQRHEANSFVKNL 780
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 120/293 (40%), Gaps = 31/293 (10%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
Q + V++ M + + D Y+ ++A + + G + + +EM + C+P+ Y++L
Sbjct: 492 QAMAVYKSML-EAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSL 550
Query: 187 ITAHLHTRDKAK-----------------ALAKALGYFQKMKGM----ERC--------- 216
+ A+ + ++ + L K L + ER
Sbjct: 551 LHAYANGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGI 610
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
P+I T N +L + + V + + + +HE+ P + TYN +M Y ++ ++ E
Sbjct: 611 SPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEE 670
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+L + KPD I++N +I +Y + + ++F + S P + T+N+ I Y
Sbjct: 671 ILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYA 730
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
+ +A V + M P TY I+ Y D A LS L
Sbjct: 731 ADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDWYCKLDQRHEANSFVKNLSNL 783
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 175/371 (47%), Gaps = 16/371 (4%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQR-WYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+ E+ S L+ +VF + R + G++ L +V+ ++ A+ FS+M+
Sbjct: 32 ILREMVLSKAELKDCDVFDVLWSTRNVCVPGFGVFDALFSVLIEEDMFEEALQCFSKMKR 91
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALG---YFQKMKGMERCKPNIVTYNILLRAC 230
P N L LH K L K G +F+ M G KP + TYNI++
Sbjct: 92 CRVFPKTRSCNGL----LH---KFARLGKTDGMKRFFKDMIGAGS-KPTVFTYNIMIDCM 143
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
+ +++ + LF+E+ L PD TYN ++D YGK G + + MKS C+PD+
Sbjct: 144 CKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDV 203
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
IT+N LI+ + K K + F+ + S KP + ++++++ + K + +A +
Sbjct: 204 ITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVD 263
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M + P+ TY ++ Y N+S A + DE+S++G + V T A+++ C
Sbjct: 264 MRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVER 323
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
EA+ LF GV P+ ++Y L + KA + +LL M+ GI P+ +
Sbjct: 324 IKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLY-- 381
Query: 471 ALETFSSSLAG 481
TF SL G
Sbjct: 382 --GTFIWSLCG 390
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 155/365 (42%), Gaps = 41/365 (11%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K R I DT Y+ +I GK G+ ++ F EM++ C PD YN LI K
Sbjct: 160 KFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFC----K 215
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
L K L +F++MK KPN+V+Y+ L+ A + + Q + ++ L P+ +
Sbjct: 216 FGKLPKGLEFFREMK-QSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEH 274
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TY ++DAY K G + + + M + +++T+ LID + + E++F +
Sbjct: 275 TYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKM 334
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+ + P L ++ ++I + KA+ +A + +M P + Y I + +
Sbjct: 335 VTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKI 394
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAY------------------------------- 405
A+ + +E+ + G +++AY
Sbjct: 395 EAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVL 454
Query: 406 ----CMNGLPTEA-DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
C N L ++A D S++ G+ +++ Y + K + E L ++M Q G
Sbjct: 455 IDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKG 514
Query: 461 IVPNK 465
+VP++
Sbjct: 515 LVPDR 519
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 104/244 (42%), Gaps = 6/244 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + + + A LF +M +G P+ + Y ALI H KAK + +AL
Sbjct: 311 YTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALI----HGFVKAKNMDRALELL 366
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+MKG KP+++ Y + + ++ + E+ E + + + Y +MDAY K
Sbjct: 367 DEMKG-RGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFK 425
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS-KEKPTLP 326
+ E +L M + +TF +LID K + K F + + +
Sbjct: 426 SENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAA 485
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
+ +MI K A +F++M P Y +I NV +A + D++
Sbjct: 486 IYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKM 545
Query: 387 SKLG 390
+++G
Sbjct: 546 AEIG 549
>gi|302810470|ref|XP_002986926.1| hypothetical protein SELMODRAFT_125134 [Selaginella moellendorffii]
gi|300145331|gb|EFJ12008.1| hypothetical protein SELMODRAFT_125134 [Selaginella moellendorffii]
Length = 458
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 158/344 (45%), Gaps = 7/344 (2%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W L+VF ++ Q+WY G Y +++ ++GK + A LF M GC P +
Sbjct: 36 QWEAALKVFELLRSQQWYQPYAGTYIRMLEMLGKCKRPDEAASLFQTMLADGCGPSREAF 95
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
AL++A+ ++ ++ A+ Q M C P++ TY++L+++C + + L
Sbjct: 96 TALMSAYT----RSNLMSTAMEVLQAMNATPHCSPDVFTYSLLIKSCCDCGQLSRAADLL 151
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM---KSNQCKPDIITFNLLIDSY 300
++ + P+ TYN ++DAY K G + ++ + +M S C+PD + N ++ +
Sbjct: 152 ADMTARGIQPNRVTYNIILDAYAKCGSLDKLHDLALQMLQSPSPSCRPDHWSRNAIVKGF 211
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
G R +ME+ F+ L + P T +S++ Y KA + K V + + Y
Sbjct: 212 GNRGDIRRMEEWFQRLTTPSDGPDSLTLHSLMAAYAKAEMFDKMHAVVRYIHRYHYQVDA 271
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
+TY +I YG ++ + F + G T ++ Y G+ + L E
Sbjct: 272 VTYNILINAYGRAGRKTQMLKTFTSMKCGGVRPDSVTYCTLINFYGKFGMQRKLPRLLEQ 331
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
V PD++ Y + AY +A+ + + M++ G P+
Sbjct: 332 MSMHKVQPDTALYNSVLDAYRRASDISSIDRYFAAMQEQGCKPD 375
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 183/433 (42%), Gaps = 33/433 (7%)
Query: 65 RPRSKRGRKSEELESKEL-VRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSD 123
R R + R + + E+ RVL ++ + LN + + LL E+ +
Sbjct: 74 RLRVEGSRWQRDWKVSEVTARVLALPRAEAHAVDAVLNCWAGRFARRNFPLLIREITFAG 133
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+ VFRWM+ Q Y A IY +I + + Q A LF EM+ C+PD +Y
Sbjct: 134 SLQHAVHVFRWMKNQENYCARNDIYGMMIRLHARHSQIDQARGLFFEMQEWRCKPDADIY 193
Query: 184 NALITAHLH---------------------TRDKAKALAKALGYFQKM-KGMERCK---- 217
N+LI AH +R + A G K +E CK
Sbjct: 194 NSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALELCKKMTR 253
Query: 218 ----PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
P++VT+NI+L A + A F+ + + +APD +T N V+ K+G E
Sbjct: 254 NGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQYGE 313
Query: 274 MESVLSRM--KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM 331
+L+ M K QC PD++T+ ++ SY + + VF ++ KP + ++N++
Sbjct: 314 AIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNAL 373
Query: 332 IINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGK 391
+ Y + A +F+ + P ++Y ++ YG +ARE F E+ K
Sbjct: 374 LGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSC 433
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
+ + NA+++AY G+ EA L G+ PD + L A + +
Sbjct: 434 RPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDT 493
Query: 452 LLKRMEQNGIVPN 464
+L+ + GI N
Sbjct: 494 ILEAAKSRGIKLN 506
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 179/388 (46%), Gaps = 20/388 (5%)
Query: 79 SKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQ 138
SK + M ++ P TLN + HC + K ++ + +E+ M+++
Sbjct: 277 SKAIAYFEMMKGANIAPDTFTLNIVI------HCLV------KDGQYGEAIELLNSMREK 324
Query: 139 RWYIA-DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
R D Y+ ++ G+ +F M G +P+ YNAL+ A+ +
Sbjct: 325 RTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSYNALLGAY-----AS 379
Query: 198 KAL-AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+ + A ALG F+ +K +P++V+Y LL A ++ ++ FKE+ ++ P+I
Sbjct: 380 RGMHADALGIFKLLK-QNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRKNSCRPNIV 438
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+YN ++DAYG GM KE S+L M+ + PD+++ + L+ + G+ + K++ + ++
Sbjct: 439 SYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTILEAA 498
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
K + +NS I +Y GKA ++ M A P +TY +I+
Sbjct: 499 KSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVTYNILISGLCKVGKY 558
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+ + + F+++ L + ++++ +Y G TEA+ F + G PD TY +
Sbjct: 559 AESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAM 618
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPN 464
+AY L K ME N + P+
Sbjct: 619 IEAYNDDGSWRNAWDLFKEMEGNTVQPD 646
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 154/329 (46%), Gaps = 5/329 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ +G A+ +F ++ +G RPD Y L+ A+ ++ KA F
Sbjct: 370 YNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAY----GRSGQPEKAREAF 425
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M+ C+PNIV+YN L+ A A + +L E+ + + PD+ + + ++ A G+
Sbjct: 426 KEMRK-NSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGR 484
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
I +++++L KS K +I+ +N I SY + K +++ +M S P T
Sbjct: 485 CRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPDAVT 544
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N +I K ++ F+ M ++ + Y +I Y ++ A F +
Sbjct: 545 YNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMK 604
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ G V T AM+EAY +G A LF+ V PD+ L +A + + E
Sbjct: 605 ESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQHE 664
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFS 476
V +L++ M++ I N++ + E + + S
Sbjct: 665 RVLQLMELMKEKCIPLNQKAYFEIIASCS 693
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 132/320 (41%), Gaps = 39/320 (12%)
Query: 197 AKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP-- 253
A +L A+ F+ MK E C N + Y +++R A+ +DQ LF E+ E P
Sbjct: 132 AGSLQHAVHVFRWMKNQENYCARNDI-YGMMIRLHARHSQIDQARGLFFEMQEWRCKPDA 190
Query: 254 DIY---------------------------------TYNGVMDAYGKNGMIKEMESVLSR 280
DIY TYN V++A G G K+ + +
Sbjct: 191 DIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTYNNVINACGAAGNWKKALELCKK 250
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
M N PD++T N+++ ++ + K F+ + + P T N +I K
Sbjct: 251 MTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKGANIAPDTFTLNIVIHCLVKDGQ 310
Query: 341 QGKAEYVFQKMTAMKYT--PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
G+A + M + P +TY I+ Y C V + +FD + G + +
Sbjct: 311 YGEAIELLNSMREKRTQCPPDVVTYTSIMHSYYVCGKVEDCKAVFDMMVAEGVKPNIVSY 370
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
NA+L AY G+ +A +F+ G+ PD +Y L AY ++ E ++ K M +
Sbjct: 371 NALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAFKEMRK 430
Query: 459 NGIVPNKRFFLEALETFSSS 478
N PN + ++ + S+
Sbjct: 431 NSCRPNIVSYNALIDAYGSA 450
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 86/192 (44%), Gaps = 7/192 (3%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ D Y+ +I G R A LF EM + +PD + ++L+ A ++
Sbjct: 609 LPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEA----LNRGSQHE 664
Query: 202 KALGYFQKMKGMERCKP-NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+ L + MK E+C P N Y ++ +C+ R+ + + + L S+ + + T N
Sbjct: 665 RVLQLMELMK--EKCIPLNQKAYFEIIASCSMLRDWKTASEIIEHLDSSLSSISVGTLNH 722
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ GK G + M + +M S+ + T+ +L+ + + K +V + + +
Sbjct: 723 LLTFLGKCGKTECMMKLFYKMMSSCSTVGVSTYTVLLRNLLAVGKWRKYIEVLQWMEDAG 782
Query: 321 EKPTLPTFNSMI 332
PTL + +++
Sbjct: 783 VSPTLYMYQNVL 794
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 172/355 (48%), Gaps = 16/355 (4%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ L KS L++FR M+ +R A YS +I + K G A+ LF+EM
Sbjct: 216 VLNRLCKSGNSALALDLFRKME-ERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
Query: 175 GCRPDPSVYNALITAHLHT---RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
G + D Y++LI + D AK L + +G P++VT++ L+
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG--------RNIIPDVVTFSALIDVFV 326
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ + + L+ E+ +APD TYN ++D + K + E + M S C+PDI+
Sbjct: 327 KEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIV 386
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
T+++LI+SY K + D ++F+ + P T+N++++ + ++ A+ +FQ+M
Sbjct: 387 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 446
Query: 352 TAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
+ PS +TY I + G CDN +++A EIF+++ K + + N ++ C
Sbjct: 447 VSRGVPPSVVTYG--ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNAS 504
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+A LF + + GV PD TY ++ K L ++M+++G P+
Sbjct: 505 KVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPD 559
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 141/330 (42%), Gaps = 49/330 (14%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L KW ++ R M R I D +S LI V K+G+ A L++EM
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIG-RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR 344
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQ 232
G PD YN+LI K L +A F M KG C+P+IVTY+IL+ + +
Sbjct: 345 GIAPDTITYNSLIDGFC----KENCLHEANQMFDLMVSKG---CEPDIVTYSILINSYCK 397
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
A+ VD LF+E+ L P+ TYN ++ + ++G + + + M S P ++T
Sbjct: 398 AKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVT 457
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+ +L+D +K ++F+ + S+ + +N
Sbjct: 458 YGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYN----------------------- 494
Query: 353 AMKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
I ++G C+ V A +F LS G V T N M+ C G
Sbjct: 495 --------------IIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+EAD+LF G TPD TY +L +A+
Sbjct: 541 LSEADMLFRKMKEDGCTPDDFTYNILIRAH 570
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 130/291 (44%), Gaps = 10/291 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + K K L+ E++ M R DT Y+ LI K+ A +F M +
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMI-TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK 379
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQ 232
GC PD Y+ LI ++ KAK + + F+++ KG+ PN +TYN L+ Q
Sbjct: 380 GCEPDIVTYSILINSYC----KAKRVDDGMRLFREISSKGL---IPNTITYNTLVLGFCQ 432
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+ ++ LF+E+ + P + TY ++D NG + + + +M+ ++ I
Sbjct: 433 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N++I D +F SL KP + T+N MI K +A+ +F+KM
Sbjct: 493 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
TP TY +I + + + E+ +E+ G ST+ +++
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 603
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 148/329 (44%), Gaps = 15/329 (4%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA-HLHTRDKAKA 199
Y DT +S L+ +G+ A+ L M RPD + LI L R
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGR----- 190
Query: 200 LAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+++AL +M G + P+ VTY +L ++ N LF+++ E + +
Sbjct: 191 VSEALVLIDRMVEYGFQ---PDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 247
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y+ V+D+ K+G + S+ + M+ K D++T++ LI +D ++ + ++
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DN 375
P + TF+++I + K +A+ ++ +M P ITY +I G+C +
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID--GFCKENC 365
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+ A ++FD + G + + T + ++ +YC + LF + G+ P++ TY
Sbjct: 366 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 425
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L + ++ ++L + M G+ P+
Sbjct: 426 LVLGFCQSGKLNAAKELFQEMVSRGVPPS 454
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 114/273 (41%), Gaps = 1/273 (0%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A+ F+ M R P + +N L A A+ + D V K + + + D+YT ++
Sbjct: 54 AIDLFESMI-QSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 112
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+ Y + + SVL R +PD ITF+ L++ + + + ++ K++
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P L T +++I +A + +M + P +TY ++ N + A ++
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
F ++ + V + ++++ C +G +A LF G+ D TY L
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ K+L+ M I+P+ F ++ F
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF 325
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L + + + LE+F MQK R + GIY+ +I M + A LF + +
Sbjct: 460 ILLDGLCDNGELNKALEIFEKMQKSRMTLG-IGIYNIIIHGMCNASKVDDAWSLFCSLSD 518
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G +PD YN +I K +L++A F+KMK + C P+ TYNIL+RA
Sbjct: 519 KGVKPDVVTYNVMIGGLC----KKGSLSEADMLFRKMKE-DGCTPDDFTYNILIRAHLGG 573
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ L +E+ + D T V+D
Sbjct: 574 SGLISSVELIEEMKVCGFSADSSTIKMVID 603
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/312 (18%), Positives = 125/312 (40%), Gaps = 5/312 (1%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ LF M S P P +N L +A T+ L G ++ G+E ++ T
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKG--MELNGIEH---DMYTM 108
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
I++ + + + ++ + PD T++ +++ + G + E +++ RM
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+ +PD++T + LI+ + + + ++ +P T+ ++ K+
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 228
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A +F+KM S + Y +I + A +F+E+ G V T ++++
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
C +G + + + PD T+ L + K ++L M GI P
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 464 NKRFFLEALETF 475
+ + ++ F
Sbjct: 349 DTITYNSLIDGF 360
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 100/250 (40%), Gaps = 61/250 (24%)
Query: 94 EPLVRT----LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYS 149
EP + T +N Y K R + LF E+ + I +T Y+
Sbjct: 382 EPDIVTYSILINSYCKAKRVDDGMRLFREI-----------------SSKGLIPNTITYN 424
Query: 150 KLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQK 209
L+ + G+ A LF EM + G P Y L+ + L KAL F+K
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE----LNKALEIFEK 480
Query: 210 MK----------------GM------------------ERCKPNIVTYNILLRACAQARN 235
M+ GM + KP++VTYN+++ + +
Sbjct: 481 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAY-GKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ + + LF+++ E PD +TYN ++ A+ G +G+I +E ++ MK D T
Sbjct: 541 LSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVE-LIEEMKVCGFSADSSTIK 599
Query: 295 LLIDSYGKRQ 304
++ID R+
Sbjct: 600 MVIDMLSDRR 609
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 9/205 (4%)
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
NG++D N I ES M ++ P I FN L + + + +D + K +
Sbjct: 44 NGIVDIK-VNDAIDLFES----MIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMEL 98
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNV 376
+ + + T MI Y + + A V + + Y P IT+ ++ G+C V
Sbjct: 99 NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVN--GFCLEGRV 156
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
S A + D + ++ + + T++ ++ C+ G +EA +L + G PD TY +
Sbjct: 157 SEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPV 216
Query: 437 YKAYTKANMKELVQKLLKRMEQNGI 461
K+ L L ++ME+ I
Sbjct: 217 LNRLCKSGNSALALDLFRKMEERNI 241
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 172/355 (48%), Gaps = 16/355 (4%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ L KS L++FR M+ +R A YS +I + K G A+ LF+EM
Sbjct: 245 VLNRLCKSGNSALALDLFRKME-ERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 303
Query: 175 GCRPDPSVYNALITAHLHT---RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
G + D Y++LI + D AK L + +G P++VT++ L+
Sbjct: 304 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG--------RNIIPDVVTFSALIDVFV 355
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ + + L+ E+ +APD TYN ++D + K + E + M S C+PDI+
Sbjct: 356 KEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIV 415
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
T+++LI+SY K + D ++F+ + P T+N++++ + ++ A+ +FQ+M
Sbjct: 416 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 475
Query: 352 TAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
+ PS +TY I + G CDN +++A EIF+++ K + + N ++ C
Sbjct: 476 VSRGVPPSVVTYG--ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNAS 533
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+A LF + + GV PD TY ++ K L ++M+++G P+
Sbjct: 534 KVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPD 588
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 141/330 (42%), Gaps = 49/330 (14%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L KW ++ R M R I D +S LI V K+G+ A L++EM
Sbjct: 315 LIGGLCNDGKWDDGAKMLREMIG-RNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR 373
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQ 232
G PD YN+LI K L +A F M KG C+P+IVTY+IL+ + +
Sbjct: 374 GIAPDTITYNSLIDGFC----KENCLHEANQMFDLMVSKG---CEPDIVTYSILINSYCK 426
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
A+ VD LF+E+ L P+ TYN ++ + ++G + + + M S P ++T
Sbjct: 427 AKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVT 486
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+ +L+D +K ++F+ + S+ + +N
Sbjct: 487 YGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYN----------------------- 523
Query: 353 AMKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
I ++G C+ V A +F LS G V T N M+ C G
Sbjct: 524 --------------IIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 569
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+EAD+LF G TPD TY +L +A+
Sbjct: 570 LSEADMLFRKMKEDGCTPDDFTYNILIRAH 599
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 130/291 (44%), Gaps = 10/291 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + K K L+ E++ M R DT Y+ LI K+ A +F M +
Sbjct: 350 LIDVFVKEGKLLEAKELYNEMI-TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK 408
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQ 232
GC PD Y+ LI ++ KAK + + F+++ KG+ PN +TYN L+ Q
Sbjct: 409 GCEPDIVTYSILINSYC----KAKRVDDGMRLFREISSKGL---IPNTITYNTLVLGFCQ 461
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+ ++ LF+E+ + P + TY ++D NG + + + +M+ ++ I
Sbjct: 462 SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 521
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N++I D +F SL KP + T+N MI K +A+ +F+KM
Sbjct: 522 YNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 581
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
TP TY +I + + + E+ +E+ G ST+ +++
Sbjct: 582 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 632
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 148/329 (44%), Gaps = 15/329 (4%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA-HLHTRDKAKA 199
Y DT +S L+ +G+ A+ L M RPD + LI L R
Sbjct: 165 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGR----- 219
Query: 200 LAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+++AL +M G + P+ VTY +L ++ N LF+++ E + +
Sbjct: 220 VSEALVLIDRMVEYGFQ---PDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 276
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y+ V+D+ K+G + S+ + M+ K D++T++ LI +D ++ + ++
Sbjct: 277 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 336
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DN 375
P + TF+++I + K +A+ ++ +M P ITY +I G+C +
Sbjct: 337 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID--GFCKENC 394
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+ A ++FD + G + + T + ++ +YC + LF + G+ P++ TY
Sbjct: 395 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNT 454
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L + ++ ++L + M G+ P+
Sbjct: 455 LVLGFCQSGKLNAAKELFQEMVSRGVPPS 483
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 114/273 (41%), Gaps = 1/273 (0%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A+ F+ M R P + +N L A A+ + D V K + + + D+YT ++
Sbjct: 83 AIDLFESMI-QSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 141
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+ Y + + SVL R +PD ITF+ L++ + + + ++ K++
Sbjct: 142 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 201
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P L T +++I +A + +M + P +TY ++ N + A ++
Sbjct: 202 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 261
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
F ++ + V + ++++ C +G +A LF G+ D TY L
Sbjct: 262 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 321
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ K+L+ M I+P+ F ++ F
Sbjct: 322 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVF 354
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L + + + LE+F MQK R + GIY+ +I M + A LF + +
Sbjct: 489 ILLDGLCDNGELNKALEIFEKMQKSRMTLG-IGIYNIIIHGMCNASKVDDAWSLFCSLSD 547
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G +PD YN +I K +L++A F+KMK + C P+ TYNIL+RA
Sbjct: 548 KGVKPDVVTYNVMIGGLC----KKGSLSEADMLFRKMKE-DGCTPDDFTYNILIRAHLGG 602
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ L +E+ + D T V+D
Sbjct: 603 SGLISSVELIEEMKVCGFSADSSTIKMVID 632
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/312 (18%), Positives = 125/312 (40%), Gaps = 5/312 (1%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ LF M S P P +N L +A T+ L G ++ G+E ++ T
Sbjct: 83 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKG--MELNGIEH---DMYTM 137
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
I++ + + + ++ + PD T++ +++ + G + E +++ RM
Sbjct: 138 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 197
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+ +PD++T + LI+ + + + ++ +P T+ ++ K+
Sbjct: 198 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 257
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A +F+KM S + Y +I + A +F+E+ G V T ++++
Sbjct: 258 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 317
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
C +G + + + PD T+ L + K ++L M GI P
Sbjct: 318 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 377
Query: 464 NKRFFLEALETF 475
+ + ++ F
Sbjct: 378 DTITYNSLIDGF 389
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 100/250 (40%), Gaps = 61/250 (24%)
Query: 94 EPLVRT----LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYS 149
EP + T +N Y K R + LF E+ + I +T Y+
Sbjct: 411 EPDIVTYSILINSYCKAKRVDDGMRLFREI-----------------SSKGLIPNTITYN 453
Query: 150 KLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQK 209
L+ + G+ A LF EM + G P Y L+ + L KAL F+K
Sbjct: 454 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE----LNKALEIFEK 509
Query: 210 MK----------------GM------------------ERCKPNIVTYNILLRACAQARN 235
M+ GM + KP++VTYN+++ + +
Sbjct: 510 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 569
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAY-GKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ + + LF+++ E PD +TYN ++ A+ G +G+I +E ++ MK D T
Sbjct: 570 LSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVE-LIEEMKVCGFSADSSTIK 628
Query: 295 LLIDSYGKRQ 304
++ID R+
Sbjct: 629 MVIDMLSDRR 638
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 9/205 (4%)
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
NG++D N I ES M ++ P I FN L + + + +D + K +
Sbjct: 73 NGIVDIK-VNDAIDLFES----MIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMEL 127
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNV 376
+ + + T MI Y + + A V + + Y P IT+ ++ G+C V
Sbjct: 128 NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVN--GFCLEGRV 185
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
S A + D + ++ + + T++ ++ C+ G +EA +L + G PD TY +
Sbjct: 186 SEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPV 245
Query: 437 YKAYTKANMKELVQKLLKRMEQNGI 461
K+ L L ++ME+ I
Sbjct: 246 LNRLCKSGNSALALDLFRKMEERNI 270
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 161/326 (49%), Gaps = 3/326 (0%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
A +++ ++ V + G+ A L M + G PD +N LI A + A +A
Sbjct: 219 ATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVAL 278
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
L + + G+ +P+++TYN L+ AC+Q+ N++ +F+++ S PD++TYN ++
Sbjct: 279 DLLFEVRQSGL---RPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMV 335
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+G+ G +E E + + PD IT+N L+ ++ K DK+E + L+ + K
Sbjct: 336 SVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFK 395
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
T+N+MI YGK A ++ +M AM TP +TY +I G + ++ A ++
Sbjct: 396 KNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKV 455
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
++++ G + +A++ AY G +A+ F+ GV PD Y ++ + +
Sbjct: 456 LEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFAR 515
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFF 468
+ E + L ++M + P+ +
Sbjct: 516 SGDTEKMLCLYRKMMNDNYRPDDDMY 541
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 174/358 (48%), Gaps = 15/358 (4%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
W + L+ F W+ R + + ++ V+G+ Q +A +F +R +G V+N
Sbjct: 170 WRRALDAFEWLA--RSSAPASRAVAVVLGVLGRARQDSIAEEVF--LRFAGEGATVQVFN 225
Query: 185 ALITAHLHTR--DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL 242
A++ + + D A+ L + +G++ P++V++N L+ A +++ + AL
Sbjct: 226 AMMGVYARSGRFDDARQLLDTM----HDRGID---PDLVSFNTLINARSKSGCLAAGVAL 278
Query: 243 --FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
E+ +S L PD+ TYN ++ A ++ +++ +V M +++C+PD+ T+N ++ +
Sbjct: 279 DLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAMVSVH 338
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
G+ ++ E++F+ L+ P T+NS++ + K K E+ +++ + +
Sbjct: 339 GRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGFKKNE 398
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
ITY +I MYG + A ++DE+ +G T M+++ EA + E+
Sbjct: 399 ITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGKVLED 458
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ G+ P + L AY K + + M +G+ P++ +L L+ F+ S
Sbjct: 459 MTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFARS 516
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 171/391 (43%), Gaps = 44/391 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ E GK W Q + + +++ D I++ LI + G A +F M
Sbjct: 751 IIIEAYGKIKLWQQAEILVKGLRQASGI--DRRIWNALIHAYAESGLYEKARAVFDNMIK 808
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
+G P N ++ A L + L + Q M K + T +LL A A+A
Sbjct: 809 TGPLPTVDSVNGMMRA-LIVDGRLDELYVVVEELQDMN----FKISKSTVLLLLDAFAKA 863
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+V +V ++ + + P+++ Y ++ + +++E +++ M+ KPD+
Sbjct: 864 GDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAIL 923
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY------------------ 335
N L++ Y FD+ QV++S++ + +P T+N++I+ Y
Sbjct: 924 NALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGK 983
Query: 336 -----------------GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
KA L+ +A+ +F++M + Y + Y ++ +Y N S+
Sbjct: 984 RGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSK 1043
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A + + + G + ++T++ ++ +Y G P EA+ + N + + + Y ++
Sbjct: 1044 AENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFD 1103
Query: 439 AYTK-ANMKELVQKLLKRMEQNGIVPNKRFF 468
AY K + KLL+ M+++G+ P+ + +
Sbjct: 1104 AYLKNGDYNHGTTKLLE-MKRDGVEPDHQVW 1133
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 128/305 (41%), Gaps = 23/305 (7%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKA---- 199
D Y+ +++V G+ G+ A LF E+ G PD YN+L+ A + K
Sbjct: 327 DLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTC 386
Query: 200 --LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
L KA G+ K N +TYN ++ + +D L+ E+ PD T
Sbjct: 387 EQLVKA-GF----------KKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVT 435
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y ++D+ GK I E VL M KP +I F+ LI +Y K E F ++
Sbjct: 436 YTVMIDSLGKMNRIAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMI 495
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
S KP + M+ + ++ K +++KM Y P Y+ ++ D
Sbjct: 496 ASGVKPDRLAYLVMLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCE 555
Query: 378 RAREIFDELSKLGKDMKVSTLNAML-EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
E+ ++ L + M + ++ ML +A C+ ++ L + + G PD + + +
Sbjct: 556 EIEEVIQDMELLCR-MNLGIISTMLIKARCV----SQGAKLLKKACLQGYKPDIKSLRSI 610
Query: 437 YKAYT 441
AY
Sbjct: 611 MNAYV 615
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 129/316 (40%), Gaps = 22/316 (6%)
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA-RNVDQVNALFKELHESILAP 253
D A+A + + + G + + + L R+ A A R V V + + +A
Sbjct: 149 DGARASPDEVAFVVRAVGESSWRRALDAFEWLARSSAPASRAVAVVLGVLGRARQDSIAE 208
Query: 254 DIY-----------TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
+++ +N +M Y ++G + +L M PD+++FN LI++ K
Sbjct: 209 EVFLRFAGEGATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSK 268
Query: 303 RQ------AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
A D + +V +S + +P + T+N++I ++ A VF+ M A +
Sbjct: 269 SGCLAAGVALDLLFEVRQSGL----RPDVITYNTLISACSQSSNLEDAVTVFEDMIASEC 324
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
P TY +++++G C A +F EL + G T N++L A+ G + +
Sbjct: 325 RPDLWTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEH 384
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
E G + TY + Y K +L L M G P+ + +++
Sbjct: 385 TCEQLVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLG 444
Query: 477 SSLAGSQSGSAKTDLT 492
+++G D+T
Sbjct: 445 KMNRIAEAGKVLEDMT 460
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 151/354 (42%), Gaps = 47/354 (13%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I + GK G+ LA+ L+ EMR GC PD Y +I + K +A+A
Sbjct: 401 YNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMI----DSLGKMNRIAEAGKVL 456
Query: 208 QKMKGMERCKPNIVTYNILLRACAQA-RNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+ M KP ++ ++ L+ A A+ R D N F + S + PD Y ++D +
Sbjct: 457 EDMTD-AGLKPTLIAFSALICAYAKGGRRADAENT-FDCMIASGVKPDRLAYLVMLDVFA 514
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
++G ++M + +M ++ +PD + +L+ + K +++E+V + M + L
Sbjct: 515 RSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQD-MELLCRMNLG 573
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY--------------GY 372
++M+I KAR + + +K Y P + I+ Y
Sbjct: 574 IISTMLI---KARCVSQGAKLLKKACLQGYKPDIKSLRSIMNAYVMTEKHEEGLSLLECI 630
Query: 373 CDNVSRAREIFDELSKLGKDMKVSTLNAM-----------------LEAYCMNGLP---- 411
C++VS ++++ E S + K ++++A L Y + L
Sbjct: 631 CEHVSFSQDLISECSIMLLCRKQTSISAYEQYSQRLMLKYPGQNCNLYEYLITCLIEAEF 690
Query: 412 -TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+EA +F + +G+ S Y+ + Y K E +L+ Q+GI N
Sbjct: 691 FSEACQVFCDMQFIGIEASKSIYESIISTYCKLGFPETAHRLMDDALQSGIPLN 744
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 137/335 (40%), Gaps = 15/335 (4%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT---RDKAKALAKALGYF 207
L+ K G M +++ M+ +G P+ +Y ++I+ H RD +A+ G
Sbjct: 856 LLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEG-- 913
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
G KP++ N LL A N D+ +++ + E+ L PD TYN ++ Y +
Sbjct: 914 ---AGF---KPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCR 967
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ +E ++L+ M P + ++ L+ + K + ++ +Q+F+ + +
Sbjct: 968 SFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSI 1027
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
++ M+ Y A KAE + M P+ T ++T YG A + + L
Sbjct: 1028 YHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPREAENVLNNLK 1087
Query: 388 KLGKDMKVSTL--NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
++VSTL + + +AY NG GV PD + +A +
Sbjct: 1088 S--SSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQVWTCFIRAASLCEQ 1145
Query: 446 KELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLA 480
LLK ++ G R E + S +A
Sbjct: 1146 TADAILLLKSLQDCGFDLPIRLLTERTPSLLSEIA 1180
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 106/258 (41%), Gaps = 8/258 (3%)
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
I++ A + + Q L K L ++ D +N ++ AY ++G+ ++ +V M
Sbjct: 751 IIIEAYGKIKLWQQAEILVKGLRQAS-GIDRRIWNALIHAYAESGLYEKARAVFDNMIKT 809
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
P + + N ++ + D++ V + L K + T ++ + KA +
Sbjct: 810 GPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEV 869
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
++ M A Y P+ Y +I++ + + + E+ G ++ LNA+L
Sbjct: 870 MKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNM 929
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y G ++ + G+ PD TY L Y ++ E LL M + G+ P
Sbjct: 930 YTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPK 989
Query: 465 KRFFLEALETFSSSLAGS 482
L+++ S LA S
Sbjct: 990 -------LQSYKSLLAAS 1000
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 155/322 (48%), Gaps = 5/322 (1%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
++S LI K+G+ AM +FS+MR G PD Y +I K+ + A+ Y
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC----KSGRVEDAMRY 431
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F++M ER P + YN L+ + D+ L E+ + + D +N ++D++
Sbjct: 432 FEQMID-ERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K G + E E + M KPDIIT++ LID Y D+ ++ S++ KP
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T+N++I Y K A +F++M + +P ITY I+ + A+E++ +
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
++ G +++ST N +L C N L EA +F+N + ++ T+ ++ A K
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670
Query: 447 ELVQKLLKRMEQNGIVPNKRFF 468
+ + L + NG+VP+ R +
Sbjct: 671 DEAKDLFAALSANGLVPDVRTY 692
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 150/328 (45%), Gaps = 7/328 (2%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
R + + YS +IA + K AM + + M +G P+ YN+++ H +
Sbjct: 227 DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIV----HGYCSS 282
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+A+G+ +KM + +P++VTYN L+ + + +F + + L P+I T
Sbjct: 283 GQPKEAIGFLKKMHS-DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITT 341
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y ++ Y G + EM +L M N P+ F++LI +Y K+ D+ VF +
Sbjct: 342 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMR 401
Query: 318 HSKEKPTLPTFNSMI-INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
P T+ ++I I R++ Y F++M + +P I Y +I D
Sbjct: 402 QQGLNPDTVTYGTVIGILCKSGRVEDAMRY-FEQMIDERLSPGNIVYNSLIHSLCIFDKW 460
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A+E+ E+ G + N++++++C G E++ LF+ +GV PD TY L
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 520
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y A + KLL M G+ P+
Sbjct: 521 IDGYCLAGKMDEATKLLASMVSVGMKPD 548
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 134/319 (42%), Gaps = 6/319 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI G+ L + G R D + L+ + + A+ L
Sbjct: 94 YGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 153
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE--SILAPDIYTYNGVMDAY 265
++ C PN+ +YNILL+ + L + + + PD+ +Y V++ +
Sbjct: 154 TQLG----CIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G + + M P+++T++ +I + K QA DK +V S++ + P
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+NS++ Y + +A +KM + P +TY ++ + AR++FD
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
++K G +++T +L+ Y G E L + G+ P+ + +L AY K
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389
Query: 446 KELVQKLLKRMEQNGIVPN 464
+ + +M Q G+ P+
Sbjct: 390 VDQAMLVFSKMRQQGLNPD 408
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 125/259 (48%), Gaps = 11/259 (4%)
Query: 217 KPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
+ + + + LL+ CA R D ++ + + + + P++++YN ++ +E
Sbjct: 123 RVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEAL 182
Query: 276 SVLSRMKSN--QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
+L M + C PD++++ +I+ + K DK + ++ P + T++S+I
Sbjct: 183 ELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIA 242
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL---G 390
KA+ KA V M P+ TY I+ +GYC + + +E L K+ G
Sbjct: 243 ALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIV--HGYCSS-GQPKEAIGFLKKMHSDG 299
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY-TKANMKELV 449
+ V T N++++ C NG TEA +F++ G+ P+ +TY L + Y TK + E+
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM- 358
Query: 450 QKLLKRMEQNGIVPNKRFF 468
LL M +NGI PN F
Sbjct: 359 HGLLDLMVRNGIHPNHYVF 377
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 134/311 (43%), Gaps = 13/311 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ L+ + K G+ A +F M G +P+ + Y L+ + AL +
Sbjct: 303 DVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYA----TKGALVEM 358
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
G M G+ PN ++IL+ A A+ VDQ +F ++ + L PD TY V
Sbjct: 359 HGLLDLMVRNGIH---PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ K+G +++ +M + P I +N LI S +DK +++ ++
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
FNS+I ++ K ++E +F M + P ITY +I Y + A +
Sbjct: 476 CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 535
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL----LY 437
+ + +G T N ++ YC +A +LF + GV+PD TY + L+
Sbjct: 536 LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF 595
Query: 438 KAYTKANMKEL 448
+ A KEL
Sbjct: 596 QTRRTAAAKEL 606
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 88/195 (45%), Gaps = 13/195 (6%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS LI G+ A L + M + G +PD YN LI + K + A
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC----KISRMEDA 568
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L F++M+ P+I+TYNI+L+ Q R L+ + ES ++ TYN ++
Sbjct: 569 LVLFREMES-SGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILH 627
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDII----TFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
KN + E RM N C D+ TFN++I + K D+ + +F +L +
Sbjct: 628 GLCKNNLTDEA----LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 683
Query: 320 KEKPTLPTFNSMIIN 334
P + T++ M N
Sbjct: 684 GLVPDVRTYSLMAEN 698
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 89/210 (42%), Gaps = 15/210 (7%)
Query: 278 LSRMKSNQCKPDIITFNLLIDS---YGKRQ-AFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
++R +++ P++ T+ +LI S G+ F + V K P +
Sbjct: 79 MARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCA 138
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
+ R + V ++MT + P+ +Y I + G CD +R++E + L + D
Sbjct: 139 D---KRTSDAMDIVLRRMTQLGCIPNVFSYN--ILLKGLCDE-NRSQEALELLQMMPDDG 192
Query: 394 KVSTLNAMLEAYCMNGLPTEADL--LFENSHNM---GVTPDSSTYKLLYKAYTKANMKEL 448
+ + +NG E DL + H M G+ P+ TY + A KA +
Sbjct: 193 GDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDK 252
Query: 449 VQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
++L M +NG++PN R + + + SS
Sbjct: 253 AMEVLTSMVKNGVMPNCRTYNSIVHGYCSS 282
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 22/187 (11%)
Query: 100 LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG 159
+N Y K+ R E +LF E+ S D Y+ ++ + +
Sbjct: 556 INGYCKISRMEDALVLFREMESS-----------------GVSPDIITYNIILQGLFQTR 598
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
+T A L+ + SG + + S YN + LH K +AL FQ + + +
Sbjct: 599 RTAAAKELYVGITESGTQLELSTYNII----LHGLCKNNLTDEALRMFQNLC-LTDLQLE 653
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
T+NI++ A + D+ LF L + L PD+ TY+ + + + G+++E++ +
Sbjct: 654 TRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFL 713
Query: 280 RMKSNQC 286
M+ N C
Sbjct: 714 SMEENGC 720
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 155/322 (48%), Gaps = 5/322 (1%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
++S LI K+G+ AM +FS+MR G PD Y +I K+ + A+ Y
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC----KSGRVEDAMRY 431
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F++M ER P + YN L+ + D+ L E+ + + D +N ++D++
Sbjct: 432 FEQMID-ERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K G + E E + M KPDIIT++ LID Y D+ ++ S++ KP
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T+N++I Y K A +F++M + +P ITY I+ + A+E++ +
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
++ G +++ST N +L C N L EA +F+N + ++ T+ ++ A K
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670
Query: 447 ELVQKLLKRMEQNGIVPNKRFF 468
+ + L + NG+VP+ R +
Sbjct: 671 DEAKDLFAALSANGLVPDVRTY 692
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 150/328 (45%), Gaps = 7/328 (2%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
R + + YS +IA + K AM + + M +G P+ YN+++ H +
Sbjct: 227 DRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIV----HGYCSS 282
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+A+G+ +KM + +P++VTYN L+ + + +F + + L P+I T
Sbjct: 283 GQPKEAIGFLKKMHS-DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITT 341
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y ++ Y G + EM +L M N P+ F++LI +Y K+ D+ VF +
Sbjct: 342 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMR 401
Query: 318 HSKEKPTLPTFNSMI-INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
P T+ ++I I R++ Y F++M + +P I Y +I D
Sbjct: 402 QQGLNPDTVTYGTVIGILCKSGRVEDAMRY-FEQMIDERLSPGNIVYNSLIHSLCIFDKW 460
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A+E+ E+ G + N++++++C G E++ LF+ +GV PD TY L
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 520
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y A + KLL M G+ P+
Sbjct: 521 IDGYCLAGKMDEATKLLASMVSVGMKPD 548
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 119/245 (48%), Gaps = 10/245 (4%)
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN--QCK 287
CA R D ++ + + + + P++++YN ++ + +E +L M + C
Sbjct: 137 CADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCP 196
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
PD++++ +I+ + K DK + ++ P + T++S+I KA+ KA V
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEV 256
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL---GKDMKVSTLNAMLEA 404
M P+ TY I+ +GYC + + +E L K+ G + V T N++++
Sbjct: 257 LTSMVKNGVMPNCRTYNSIV--HGYCSS-GQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY 313
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY-TKANMKELVQKLLKRMEQNGIVP 463
C NG TEA +F++ G+ P+ +TY L + Y TK + E+ LL M +NGI P
Sbjct: 314 LCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM-HGLLDLMVRNGIHP 372
Query: 464 NKRFF 468
N F
Sbjct: 373 NHYVF 377
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 114/251 (45%), Gaps = 2/251 (0%)
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHE--SILAPDIYTYNGVMDAYGKNGMIKE 273
C PN+ +YNILL+ + L + + + PD+ +Y V++ + K G + +
Sbjct: 158 CIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDK 217
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
M P+++T++ +I + K QA DK +V S++ + P T+NS++
Sbjct: 218 AYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVH 277
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
Y + +A +KM + P +TY ++ + AR++FD ++K G
Sbjct: 278 GYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKP 337
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
+++T +L+ Y G E L + G+ P+ + +L AY K + +
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397
Query: 454 KRMEQNGIVPN 464
+M Q G+ P+
Sbjct: 398 SKMRQQGLNPD 408
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 134/311 (43%), Gaps = 13/311 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ L+ + K G+ A +F M G +P+ + Y L+ + AL +
Sbjct: 303 DVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYA----TKGALVEM 358
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
G M G+ PN ++IL+ A A+ VDQ +F ++ + L PD TY V
Sbjct: 359 HGLLDLMVRNGIH---PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ K+G +++ +M + P I +N LI S +DK +++ ++
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
FNS+I ++ K ++E +F M + P ITY +I Y + A +
Sbjct: 476 CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 535
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL----LY 437
+ + +G T N ++ YC +A +LF + GV+PD TY + L+
Sbjct: 536 LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF 595
Query: 438 KAYTKANMKEL 448
+ A KEL
Sbjct: 596 QTRRTAAAKEL 606
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 88/195 (45%), Gaps = 13/195 (6%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS LI G+ A L + M + G +PD YN LI + K + A
Sbjct: 513 DIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC----KISRMEDA 568
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L F++M+ P+I+TYNI+L+ Q R L+ + ES ++ TYN ++
Sbjct: 569 LVLFREMES-SGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILH 627
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDII----TFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
KN + E RM N C D+ TFN++I + K D+ + +F +L +
Sbjct: 628 GLCKNNLTDEA----LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSAN 683
Query: 320 KEKPTLPTFNSMIIN 334
P + T++ M N
Sbjct: 684 GLVPDVRTYSLMAEN 698
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 90/210 (42%), Gaps = 15/210 (7%)
Query: 278 LSRMKSNQCKPDIITFNLLIDS---YGKRQ-AFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
++R +++ P++ T+ +L+ S G+ F + V K P +
Sbjct: 79 MARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCA 138
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
+ R + V ++MT + P+ +Y I + G CD+ +R++E + L + D
Sbjct: 139 D---KRTSDAMDIVLRRMTQLGCIPNVFSYN--ILLKGLCDD-NRSQEALELLQMMPDDG 192
Query: 394 KVSTLNAMLEAYCMNGLPTEADL--LFENSHNM---GVTPDSSTYKLLYKAYTKANMKEL 448
+ + +NG E DL + H M G+ P+ TY + A KA +
Sbjct: 193 GDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDK 252
Query: 449 VQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
++L M +NG++PN R + + + SS
Sbjct: 253 AMEVLTSMVKNGVMPNCRTYNSIVHGYCSS 282
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 22/187 (11%)
Query: 100 LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG 159
+N Y K+ R E +LF E+ S D Y+ ++ + +
Sbjct: 556 INGYCKISRMEDALVLFREMESS-----------------GVSPDIITYNIILQGLFQTR 598
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
+T A L+ + SG + + S YN + LH K +AL FQ + + +
Sbjct: 599 RTAAAKELYVGITESGTQLELSTYNII----LHGLCKNNLTDEALRMFQNLC-LTDLQLE 653
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
T+NI++ A + D+ LF L + L PD+ TY+ + + + G+++E++ +
Sbjct: 654 TRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFL 713
Query: 280 RMKSNQC 286
M+ N C
Sbjct: 714 SMEENGC 720
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 181/398 (45%), Gaps = 26/398 (6%)
Query: 96 LVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVM 155
+RT N V ++ ++ LGK+ + + + ++ + + G Y+ LI
Sbjct: 131 FIRTRNDRVSLLNGSVIAVIVSILGKTGRVSRAASLLHNLEADGFEVDVYG-YTSLITAY 189
Query: 156 GKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER 215
+ R A+ +F +M+ GC P YNA++ + AK + Q MK
Sbjct: 190 ANNKKYRDALKVFGKMKEVGCEPTLITYNAILNVY---GKMGMPWAKIIALVQDMK-CHG 245
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
P++ TYN L+ C ++ LF+E+ + PD TYN ++D YGK+ KE
Sbjct: 246 LAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAM 305
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
VL +M+SN +P ++T+N L+ +Y + + + + ++ KP + T+ +++ +
Sbjct: 306 EVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGF 365
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
A + A VF++M + P+ T+ +I MYG R F+E+ K+ K++KV
Sbjct: 366 VNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYG-------DRGKFEEMVKVFKEIKV 418
Query: 396 S-------TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
T N +L + NG+ +E +FE P+ T+ L AY + +
Sbjct: 419 CKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQ 478
Query: 449 VQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGS 486
KRM + G+ P+ L T+++ LA G
Sbjct: 479 AMAAYKRMLEAGVSPD-------LSTYNAVLATLARGG 509
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 154/307 (50%), Gaps = 11/307 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI+ A+ LF E++ +G RPD YNAL+ + +R +A+
Sbjct: 249 DLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAM--- 305
Query: 204 LGYFQKMKGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+ +K ME +P++VTYN L+ A + ++ L +++ + + PD+YTY +
Sbjct: 306 ----EVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTL 361
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ + G + V M+ CKP+I TFN LI YG R F++M +VFK + K
Sbjct: 362 LSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKC 421
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P + T+N+++ +G+ + + VF++M ++ P T+ +I+ YG C + +A
Sbjct: 422 SPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMA 481
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ + + G +ST NA+L GL +++ + + G P+ TY L AY
Sbjct: 482 AYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYSSLLHAY- 540
Query: 442 KANMKEL 448
AN +E+
Sbjct: 541 -ANGREV 546
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 170/391 (43%), Gaps = 75/391 (19%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ L++ G+ LAM +F EMR GC+P+ +NALI + R K + + K
Sbjct: 354 DVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMY-GDRGKFEEMVKV 412
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQ------------------------------- 232
F+++K + +C P+IVT+N LL Q
Sbjct: 413 ---FKEIK-VCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLIS 468
Query: 233 ----ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
+ DQ A +K + E+ ++PD+ TYN V+ + G+ ++ E VL+ MK CKP
Sbjct: 469 AYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKP 528
Query: 289 DIITFNLLIDSYGKRQAFDKM----EQVFKS-------------LMHSKEK--------- 322
+ +T++ L+ +Y + ++M E+++ L++SK
Sbjct: 529 NEVTYSSLLHAYANGREVERMNALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAF 588
Query: 323 ---------PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
P + T N+M+ YG+ ++ KA + M T S +Y ++ MY
Sbjct: 589 LEFRKRGISPDVTTSNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRT 648
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+N ++ +IF E+ G + V + N ++ AYC N + EA + E PD TY
Sbjct: 649 ENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTY 708
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
AY +M +++ M + G PN
Sbjct: 709 NTFIAAYAADSMFVEAIDVIRYMIKQGCKPN 739
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 175/407 (42%), Gaps = 55/407 (13%)
Query: 102 KYVKVVRSEHCFLLFEELGKSDKWLQC----------LEVFRWMQKQRWYIADTGIYSKL 151
K + +V+ C L +L + + C L++F + K + D Y+ L
Sbjct: 233 KIIALVQDMKCHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEI-KVAGFRPDAVTYNAL 291
Query: 152 IAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM- 210
+ V GK + + AM + +M ++ RP YN+L++A++ + L AL +KM
Sbjct: 292 LDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYV----RGGLLEDALVLKRKMV 347
Query: 211 -KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG 269
KG+ KP++ TY LL A + +F+E+ + P+I T+N ++ YG G
Sbjct: 348 DKGI---KPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRG 404
Query: 270 MIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFN 329
+EM V +K +C PDI+T+N L+ +G+ ++ VF+ + S+ P TFN
Sbjct: 405 KFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFN 464
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
++I YG+ +A +++M +P TY ++ ++ ++ E+
Sbjct: 465 TLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDG 524
Query: 390 GKDMKVSTLNAMLEAYC-------MNGLPTE----------------------ADLLFEN 420
G T +++L AY MN L E DLL E
Sbjct: 525 GCKPNEVTYSSLLHAYANGREVERMNALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVET 584
Query: 421 SHNM------GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
G++PD +T + Y + M ++L M ++G+
Sbjct: 585 ERAFLEFRKRGISPDVTTSNAMLSIYGRKKMVPKANEILNFMYESGL 631
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 145/319 (45%), Gaps = 10/319 (3%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VF M++ R + + ++ LI+ G+ G AM + M +G PD S YNA+
Sbjct: 447 VFEEMKRSR-FAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAV---- 501
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
L T + ++ +MK CKPN VTY+ LL A A R V+++NAL +E++
Sbjct: 502 LATLARGGLWEQSEKVLAEMKD-GGCKPNEVTYSSLLHAYANGREVERMNALAEEIYSGT 560
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
+ ++ K ++ E E + PD+ T N ++ YG+++ K
Sbjct: 561 IKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKRGISPDVTTSNAMLSIYGRKKMVPKAN 620
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
++ + S +L ++NS++ Y + K+E +F+++ P I+Y +I Y
Sbjct: 621 EILNFMYESGLTLSLTSYNSLMYMYSRTENFHKSEQIFREILDKGIEPDVISYNIVI--Y 678
Query: 371 GYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
YC D + A+ I +E+ V T N + AY + + EA + G P
Sbjct: 679 AYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAAYAADSMFVEAIDVIRYMIKQGCKP 738
Query: 429 DSSTYKLLYKAYTKANMKE 447
+ +TY + Y K +++
Sbjct: 739 NHNTYNSIVDWYCKLKLRD 757
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 164/383 (42%), Gaps = 43/383 (11%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQ--RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMR 172
+ + LG ++K+ L +F +++ + R + + + + +++++GK G+ A L +
Sbjct: 112 IIKGLGFNNKFDLALSLFDFIRTRNDRVSLLNGSVIAVIVSILGKTGRVSRAASLLHNLE 171
Query: 173 NSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
G D Y +LITA+ + K AL F KMK + C+P ++T
Sbjct: 172 ADGFEVDVYGYTSLITAYANN----KKYRDALKVFGKMKEV-GCEPTLIT---------- 216
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMI-KEMESVLSRMKSNQCKPDII 291
YN +++ YGK GM ++ +++ MK + PD+
Sbjct: 217 -------------------------YNAILNVYGKMGMPWAKIIALVQDMKCHGLAPDLC 251
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
T+N LI +++ +F+ + + +P T+N+++ YGK+R +A V ++M
Sbjct: 252 TYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQM 311
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+ + PS +TY +++ Y + A + ++ G V T +L + G
Sbjct: 312 ESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKE 371
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
A +FE +G P+ T+ L K Y E + K+ K ++ P+ +
Sbjct: 372 ELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTL 431
Query: 472 LETFSSSLAGSQSGSAKTDLTRS 494
L F + S+ ++ RS
Sbjct: 432 LAVFGQNGMDSEVSGVFEEMKRS 454
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 162/341 (47%), Gaps = 16/341 (4%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
++ R M+ +R AD YS +I + + G A+ LF EM G + YN+L+
Sbjct: 213 FDMLRKME-ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
KA + M E PN++T+N+LL + + + N L+KE+
Sbjct: 272 GLC----KAGKWNDGALLLKDMVSRE-IVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 326
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
++P+I TYN +MD Y + E ++L M N+C PDI+TF LI Y + D
Sbjct: 327 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDD 386
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINY---GKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+VF+++ T++ ++ + GK +L AE +FQ+M + P +TY
Sbjct: 387 GMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL---AEELFQEMVSHGVLPDVMTYG- 442
Query: 366 IITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
I + G CDN + +A EIF++L K D+ + ++E C G +A LF +
Sbjct: 443 -ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
GV P+ TY ++ K LL++ME++G PN
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 542
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 142/331 (42%), Gaps = 5/331 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+S+ + + + Q L + ++ +G + N +I A + LG
Sbjct: 91 FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYS-VLGKV 149
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K+ G E P+ T+N L+ V + L + E+ PD+ TYN +++ +
Sbjct: 150 MKL-GYE---PDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICR 205
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+G +L +M+ K D+ T++ +IDS + D +FK + K ++ T
Sbjct: 206 SGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT 265
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+NS++ KA + + M + + P+ IT+ ++ ++ + A E++ E+
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G + T N +++ YCM +EA+ + + +PD T+ L K Y +
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
K+ + + + G+V N + ++ F S
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 149/325 (45%), Gaps = 12/325 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L K+ KW + + M R + + ++ L+ V K+G+ + A L+ EM
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMV-SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 327
Query: 175 GCRPDPSVYNALITAH-LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G P+ YN L+ + + R L++A M +C P+IVT+ L++
Sbjct: 328 GISPNIITYNTLMDGYCMQNR-----LSEANNMLDLMV-RNKCSPDIVTFTSLIKGYCMV 381
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ VD +F+ + + L + TY+ ++ + ++G IK E + M S+ PD++T+
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+L+D +K ++F+ L SK + + ++I K A +F +
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501
Query: 354 MKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P+ +TY +I+ G C ++S A + ++ + G T N ++ A+ +G
Sbjct: 502 KGVKPNVMTYTVMIS--GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559
Query: 412 TEADLLFENSHNMGVTPDSSTYKLL 436
T + L E + G + D+S+ K++
Sbjct: 560 TASAKLIEEMKSCGFSADASSIKMV 584
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 112/262 (42%), Gaps = 1/262 (0%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A+ FQ+M R P +V ++ A A+ + + V K+L + +A +IYT N ++
Sbjct: 72 AIALFQEMI-RSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+ + + SVL ++ +PD TFN LI+ K + ++ + +
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQ 190
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P + T+NS++ ++ A + +KM TY II + A +
Sbjct: 191 PDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
F E+ G V T N+++ C G + LL ++ + + P+ T+ +L + K
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
+ +L K M GI PN
Sbjct: 311 EGKLQEANELYKEMITRGISPN 332
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI--YSKLIAVMGKKGQTRLAMWLFSEM 171
+L + L + K + LE+F +QK + D GI Y+ +I M K G+ A LF +
Sbjct: 443 ILLDGLCDNGKLEKALEIFEDLQKSKM---DLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
G +P+ Y +I+ K +L++A +KM+ + PN TYN L+RA
Sbjct: 500 PCKGVKPNVMTYTVMISGLC----KKGSLSEANILLRKMEE-DGNAPNDCTYNTLIRAHL 554
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ ++ L +E+ + D + V+D
Sbjct: 555 RDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 173/386 (44%), Gaps = 40/386 (10%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSE-------------- 170
W + LE++ + RWY + + + +++V+G+ Q LA LF
Sbjct: 71 WQRALELYECLNVARWYAPNPRMLAVMLSVLGRANQPGLAQELFDRAESSIGNCVQVYNS 130
Query: 171 --------------------MRNSGCRPDPSVYNALITAHLHTRDKAK-ALAKALGYFQK 209
M++ GCRPD +N +I A TR + LA +L
Sbjct: 131 LMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKAR--TRGGMQEGLASSLLQDVY 188
Query: 210 MKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG 269
G+ +P+ +TYN L+ AC+ + +F+E+ PDI+TYN ++ YG+ G
Sbjct: 189 AAGL---RPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAG 245
Query: 270 MIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFN 329
++ S+ M+ PD +T+N ++ ++ + +++E++ + ++ T+N
Sbjct: 246 RVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYN 305
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
+MI YGKA + KAE ++ +M P +T+ +I G V+ A +F+++ K
Sbjct: 306 TMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKS 365
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
+ +AM+ AY + T+A+ + GV PD Y ++ + KA M E
Sbjct: 366 QVRPTLQAFSAMICAYAKADMFTDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAGMPEKC 425
Query: 450 QKLLKRMEQNGIVPNKRFFLEALETF 475
L K M +G+ P + + F
Sbjct: 426 IILYKAMVGSGLKPELSVYAIMVRVF 451
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 151/301 (50%), Gaps = 9/301 (2%)
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITA-HLHTRDKAKALAKALGYFQKMKGMERCKP 218
Q LA L ++ +G RPD YN LI+A L+ R L+ A+ F++M+ + C P
Sbjct: 176 QEGLASSLLQDVYAAGLRPDTITYNTLISACSLNNR-----LSDAILIFEEMQ-RQGCDP 229
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
+I TYN ++ +A V+ +++F+ + E PD TYN V+ A+ ++G I+E+E +
Sbjct: 230 DIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIR 289
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
M+ +C D IT+N +I YGK K E+++ + P TF +I GKA
Sbjct: 290 GMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKA 349
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
+A +F+ M + P+ + +I Y D + A + + + G +
Sbjct: 350 GFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFTDAEHTYSCMLRAGVRPDLLAY 409
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA-YTKANMKELVQKLLKRME 457
+ ML+ + G+P + +L++ G+ P+ S Y ++ + Y K+++ E ++ L K M
Sbjct: 410 SVMLDVFFKAGMPEKCIILYKAMVGSGLKPELSVYAIMVRVFYQKSSVAE-IENLSKEMV 468
Query: 458 Q 458
Q
Sbjct: 469 Q 469
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 159/339 (46%), Gaps = 13/339 (3%)
Query: 126 LQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
+ CL F + D+ ++ +IA GK + A +F +++ G + S Y+A
Sbjct: 635 IDCLHAFD--------VKDSAMHVAIIASYGKLKLWQNAEIVFRDLQQHGFAGNTSAYSA 686
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
L++A+ T + +A +AL G++ PN N +L A +A +++ F+
Sbjct: 687 LLSAYAETGNFERA-TRALDNMVA-AGLQ---PNATCANYVLEAFGRAGKAKEISEFFQR 741
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
L E ++P+ T+ + A+ +NG ++E S+ +MK P I F L+ Y +
Sbjct: 742 LPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVFKALLALYSRETV 801
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
E++ K + + + + +N MI Y K A VF+ M + +P T+
Sbjct: 802 EIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSPDATTFNT 861
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+I +Y V A+ + E+ K G +ST ++ AY +A+L+F++ G
Sbjct: 862 LIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETG 921
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
PD++ Y ++ Y KA +++++++M+ +G P+
Sbjct: 922 CKPDATAYNVMINVYRKAGEHRKIEEIIEQMKVDGFEPS 960
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 170/376 (45%), Gaps = 7/376 (1%)
Query: 89 SFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIY 148
+F E L+ L+ + V S + GK W VFR +Q Q + +T Y
Sbjct: 627 AFVAHELLIDCLHAF-DVKDSAMHVAIIASYGKLKLWQNAEIVFRDLQ-QHGFAGNTSAY 684
Query: 149 SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQ 208
S L++ + G A M +G +P+ + N ++ A KAK +++ +FQ
Sbjct: 685 SALLSAYAETGNFERATRALDNMVAAGLQPNATCANYVLEA-FGRAGKAKEISE---FFQ 740
Query: 209 KMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
++ M PN T+ ++ A ++ N+++ ++++++ E+ +P I + ++ Y +
Sbjct: 741 RLPEMG-ISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVFKALLALYSRE 799
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
+ + E ++ +K + DI +N +I Y K ++ VFK + P TF
Sbjct: 800 TVEIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCSPDATTF 859
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
N++I+ Y + ++ +A+ + ++M P+ TY +I+ YG A +F +++
Sbjct: 860 NTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAE 919
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
G + N M+ Y G + + + E G P +T +L +Y K
Sbjct: 920 TGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMKVDGFEPSLTTIHMLMDSYGKGGATGK 979
Query: 449 VQKLLKRMEQNGIVPN 464
+++L+ + + G+ P+
Sbjct: 980 AEEVLETLPEIGMSPD 995
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 124/281 (44%), Gaps = 8/281 (2%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
PN ++L +A LF + ES + + YN +M Y ++G ++ +
Sbjct: 89 PNPRMLAVMLSVLGRANQPGLAQELF-DRAESSIGNCVQVYNSLMSVYARHGDWNSVQQL 147
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH----SKEKPTLPTFNSMII 333
L RM+ C+PD++TFN++I + R E + SL+ + +P T+N++I
Sbjct: 148 LCRMQDRGCRPDLVTFNIVIKA---RTRGGMQEGLASSLLQDVYAAGLRPDTITYNTLIS 204
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
A +F++M P TY +I++YG V A IF + + G
Sbjct: 205 ACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTP 264
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
T N++L A+ +G E + + + + D TY + Y KA M ++L
Sbjct: 265 DAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELY 324
Query: 454 KRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTRS 494
+M++ G P+ F ++T + +++ + D+ +S
Sbjct: 325 VQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKS 365
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 17/186 (9%)
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
+ LLID AFD V S MH ++I +YGK +L AE VF+
Sbjct: 629 VAHELLIDCL---HAFD----VKDSAMHV----------AIIASYGKLKLWQNAEIVFRD 671
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
+ + + Y +++ Y N RA D + G + N +LEA+ G
Sbjct: 672 LQQHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNATCANYVLEAFGRAGK 731
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
E F+ MG++P+S T+ +++ A+++ E + + ++M++ G P+ + F
Sbjct: 732 AKEISEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVFKA 791
Query: 471 ALETFS 476
L +S
Sbjct: 792 LLALYS 797
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 143/372 (38%), Gaps = 49/372 (13%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL---------HT- 193
D+ ++ LI +GK G A +F +M S RP ++A+I A+ HT
Sbjct: 335 DSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFTDAEHTY 394
Query: 194 --------RDKAKALAKALGYFQKMKGMERC------------KPNIVTYNILLRACAQA 233
R A + L F K E+C KP + Y I++R Q
Sbjct: 395 SCMLRAGVRPDLLAYSVMLDVFFKAGMPEKCIILYKAMVGSGLKPELSVYAIMVRVFYQK 454
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+V ++ L KE+ +S + + K G E VL + + T
Sbjct: 455 SSVAEIENLSKEMVQSSA-----SLAALSSTLAKGGFYAEAAVVLKISFAQGVAVKVETL 509
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMH--SKEKPTLPT--FNSMIINYGKARLQGKAEYVFQ 349
N D G +A K+ + L+H S +P++ + + + KA +AE +
Sbjct: 510 N---DVLGAFEASGKLSDA-RDLVHAVSSIEPSVAAHLYKRLAVMLAKAGRFSEAEE--E 563
Query: 350 KMTAMKYTPSFIT--YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
T+ Y ++ + ++ Y A F +++ G +M L + YC
Sbjct: 564 MRTSQTYGQVQVSDFLKVLVASYDRAGMQDEALARFLDMTTEGLEMDAEVLQTAVMCYCR 623
Query: 408 NGLPTEA-DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
G A +LL + H V DS+ + + +Y K + + + + + ++Q+G N
Sbjct: 624 KGFAFVAHELLIDCLHAFDVK-DSAMHVAIIASYGKLKLWQNAEIVFRDLQQHGFAGNTS 682
Query: 467 FFLEALETFSSS 478
+ L ++ +
Sbjct: 683 AYSALLSAYAET 694
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 155/326 (47%), Gaps = 12/326 (3%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
W + +E+ M K+ D Y+ LI+ ++ + A +F EM+ SG PD +N
Sbjct: 224 WKEVVELVASM-KEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFN 282
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMER--CKPNIVTYNILLRACAQARNVDQVNAL 242
+L+ + R +A+ + ++ MER C P++VTYN L+ + + ++Q AL
Sbjct: 283 SLLDVYGKARRHDEAI-------EVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVAL 335
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
+E+ + PD+ TY ++ + G I M N CKP++ T+N LI +G
Sbjct: 336 KQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGV 395
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
R F +M VF L + P + T+N+++ +G+ L + VF++M Y P T
Sbjct: 396 RGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDT 455
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y +I+ Y C A +I+ + + G VST NA+L A G +A+ LF
Sbjct: 456 YVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEME 515
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKEL 448
PD +Y L AY AN K L
Sbjct: 516 ERDCKPDEYSYSSLLHAY--ANAKRL 539
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 143/321 (44%), Gaps = 4/321 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D G Y+ L++ + G+ R A+ +F M +SG +P YN + LH K K
Sbjct: 171 DAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVV----LHVYSKMAVPWKE 226
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ P+ TYN L+ C + + +F E+ S PD T+N ++D
Sbjct: 227 VVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLD 286
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
YGK E V+ M+ C P ++T+N LI SY K ++ + + + KP
Sbjct: 287 VYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKP 346
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T+ ++I +A A + +M P+ TY +I M+G +F
Sbjct: 347 DVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVF 406
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
DEL G + T N +L + NGL +E +F+ G P+ TY L +Y++
Sbjct: 407 DELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRC 466
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+ +L ++ KRM + GI P+
Sbjct: 467 GLFDLAMQIYKRMMEAGIYPD 487
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 159/402 (39%), Gaps = 75/402 (18%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI+ + + G+ A+ + EM +GC+P+ YNALI H R K +
Sbjct: 347 DVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMH-GVRGK---FPEM 402
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH---------------- 247
+ F +++ P+IVT+N LL Q +V+ +FKE+
Sbjct: 403 MAVFDELRSAGFV-PDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLIS 461
Query: 248 -------------------ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
E+ + PD+ TYN V+ A + G ++ E + + M+ CKP
Sbjct: 462 SYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKP 521
Query: 289 DIITFNLLIDSYGKRQAFDKM-----------------------------------EQVF 313
D +++ L+ +Y + DKM E+ F
Sbjct: 522 DEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAF 581
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
L + + N+M+ YGK R+ K E + M S TY ++ MY
Sbjct: 582 LELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRL 641
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ + I E+ G + N ++ AY G EA LF G+ PD TY
Sbjct: 642 GDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTY 701
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ K+Y +M E +L++ M G PN+R + +E +
Sbjct: 702 NIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGY 743
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 138/295 (46%), Gaps = 10/295 (3%)
Query: 128 CLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
+++++ M + Y D Y+ +++ + + G+ A LF+EM C+PD Y++L+
Sbjct: 472 AMQIYKRMMEAGIY-PDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLL 530
Query: 188 TAHLHTR--DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
A+ + + DK KAL+ + ER +P+ L+ ++ N+ + F E
Sbjct: 531 HAYANAKRLDKMKALSDDIY-------SERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLE 583
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
L + + DI N ++ YGKN M++++E +LS MK + T+N L+ Y +
Sbjct: 584 LRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGD 643
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+K E + + S +P ++N++I YG+ +A +F +M P +TY
Sbjct: 644 CEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNI 703
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
+ Y A E+ + G T N+++E YC NG T+A + N
Sbjct: 704 FVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSN 758
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 150/300 (50%), Gaps = 11/300 (3%)
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
F +MR P P NAL LH K + +F+ M G K ++ TYNI++
Sbjct: 9 FLKMRKFRVFPKPRSCNAL----LHRLSKVGRGDLSRKFFKDM-GAAGIKRSVFTYNIMI 63
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
+ +++ +LF ++ E+ PDI TYN ++D +GK G++ E + +MK C
Sbjct: 64 DYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCD 123
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE---KPTLPTFNSMIINYGKARLQGKA 344
PD+IT+N LI+ + K F++M + F+ L K KP + T+++ I + K + +A
Sbjct: 124 PDVITYNALINCFCK---FERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 180
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
F M + TP+ TY +I N++ A ++ +E+ + G + V T A+L+
Sbjct: 181 IKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDG 240
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
C G EA+ +F N GV P+ TY L + KA E + +LK M++ I P+
Sbjct: 241 LCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPD 300
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 152/331 (45%), Gaps = 21/331 (6%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ LI GK G + +F +M+++ C PD YNALI K
Sbjct: 83 KEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFC----K 138
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+ + KA + +MK KPN+VTY+ + A + + + F ++ L P+ +
Sbjct: 139 FERMPKAFEFLHEMKA-NGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEF 197
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TY ++DA K G + E ++ + K +++T+ L+D + + E+VF+++
Sbjct: 198 TYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAM 257
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN- 375
+++ P T+ +++ + KA+ A+ + ++M P + Y I ++G C+
Sbjct: 258 LNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTI--LWGLCNES 315
Query: 376 -VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
+ A+ + E+ + G + +++AY +G TEA L E +
Sbjct: 316 RLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD----------- 364
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
L K N E+ +KL M G++P+K
Sbjct: 365 -LVDGLCKNNCFEVAKKLFDEMLDKGMMPDK 394
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 157/397 (39%), Gaps = 45/397 (11%)
Query: 91 SDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSK 150
+D +P V T N + +CF FE + K+ ++L + K + YS
Sbjct: 120 ADCDPDVITYNALI------NCFCKFERMPKAFEFLHEM-------KANGLKPNVVTYST 166
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
I K+G + A+ F +MR P+ Y +LI A+ KA LA+AL +++
Sbjct: 167 FIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANC----KAGNLAEALKLVEEI 222
Query: 211 --KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
G+ K N+VTY LL + + + +F+ + + +AP+ TY ++ + K
Sbjct: 223 LQAGI---KLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKA 279
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK-------------------- 308
++ + +L MK KPD++ + ++ ++
Sbjct: 280 KEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIY 339
Query: 309 ---MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
M+ FKS ++ L ++ K A+ +F +M P I Y
Sbjct: 340 TTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTA 399
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+I N+ A + D + ++G ++ + A++ +G +A L + G
Sbjct: 400 LIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKG 459
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
V PD Y L K Y + +L M + G++
Sbjct: 460 VLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMI 496
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 83/197 (42%), Gaps = 2/197 (1%)
Query: 270 MIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFN 329
M++E +M+ + P + N L+ K D + FK + + K ++ T+N
Sbjct: 1 MLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYN 60
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
MI K A +F +M +TP +TY +I +G + IF+++
Sbjct: 61 IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 120
Query: 390 GKDMKVSTLNAMLEAYC-MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
D V T NA++ +C +P + L E N G+ P+ TY A+ K M +
Sbjct: 121 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKAN-GLKPNVVTYSTFIDAFCKEGMLQE 179
Query: 449 VQKLLKRMEQNGIVPNK 465
K M + + PN+
Sbjct: 180 AIKFFVDMRRVALTPNE 196
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 179/399 (44%), Gaps = 39/399 (9%)
Query: 104 VKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRL 163
V++ ++ CF++ + +G+ + W + LE++ + + WY + + + ++ V+GK Q L
Sbjct: 176 VQMTPTDFCFVV-KWVGQQN-WQRALELYECLNLRHWYAPNARMVATILGVLGKANQEAL 233
Query: 164 AMWLFSE----------------------------------MRNSGCRPDPSVYNALITA 189
A+ +F+ MR GC PD +N LI A
Sbjct: 234 AVEIFARAESSVGDTVQVYNAMMGVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINA 293
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ + LA L + G+ +P+I+TYN L+ AC++ N+++ A+F ++
Sbjct: 294 RMKSGAMEPNLALQLLNEVRRSGI---RPDIITYNTLISACSRESNLEEAVAVFSDMESH 350
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
PD++TYN ++ YG+ ++ E + ++S PD +T+N L+ ++ + +K+
Sbjct: 351 RCQPDLWTYNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKV 410
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
+ + ++ T+N++I YGK +A +++ M + P +TY +I
Sbjct: 411 RDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDS 470
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
G V A + E+ G + T +A++ AY G EA+ F G+ PD
Sbjct: 471 LGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPD 530
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
Y ++ + + N + L M + G P+ +
Sbjct: 531 RLAYSVMLDFFLRFNEMKKAMGLYHEMIREGFTPDNGLY 569
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 162/336 (48%), Gaps = 14/336 (4%)
Query: 135 MQKQRWYIADTGIYSKLIAVMGKKG--QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH 192
+ ++R + D ++ LI K G + LA+ L +E+R SG RPD YN LI+A
Sbjct: 274 LMRERGCVPDLVSFNTLINARMKSGAMEPNLALQLLNEVRRSGIRPDIITYNTLISAC-- 331
Query: 193 TRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA---CAQARNVDQVNALFKELHES 249
+ L +A+ F M+ RC+P++ TYN ++ CA+AR ++ LFKEL
Sbjct: 332 --SRESNLEEAVAVFSDMES-HRCQPDLWTYNAMISVYGRCARARKAEE---LFKELESK 385
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
PD TYN ++ A+ + G +++ + M D +T+N +I YGK+ D+
Sbjct: 386 GFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQA 445
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
Q+++ + S P T+ +I + GKA +A V +M P+ TY +I
Sbjct: 446 MQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICA 505
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
Y A E F+ + + G + ML+ + +A L+ G TPD
Sbjct: 506 YAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREGFTPD 565
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQ-NGIVPN 464
+ Y+++ A + NM ++V ++++ ME+ +G+ P
Sbjct: 566 NGLYEVMMHALVRENMWDVVDRIIRDMEELSGMNPQ 601
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 156/348 (44%), Gaps = 6/348 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ E GK W Q E +QR D +++ LI G A +F+ M
Sbjct: 780 IVETYGKLKIW-QKAESLVGSLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMRD 838
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P N L+ A + R + L + Q M G++ K +I+ + L A AQA
Sbjct: 839 GPSPTVDSVNGLLQALIVDR-RLNELYVVIQELQDM-GLKISKSSIL---LTLEAFAQAG 893
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
N+ +V ++ + + P ++ Y ++ K ++++E++L M+ +PD+ N
Sbjct: 894 NLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQPDLQICN 953
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++ Y + F M +++ + + KP T+N++II Y + R + + KM ++
Sbjct: 954 SILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSL 1013
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P TY +IT + +A E+F+EL G + + + M++ Y +G +A
Sbjct: 1014 GLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKA 1073
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+ L G+ P ST LL +Y K+ E + +LK + G+V
Sbjct: 1074 ENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVV 1121
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 136/314 (43%), Gaps = 8/314 (2%)
Query: 113 FLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMR 172
L E ++ + +++ M K Y +Y ++ ++ K + R + EM
Sbjct: 883 LLTLEAFAQAGNLFEVQKIYNGM-KAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEME 941
Query: 173 NSGCRPDPSVYNALITAHLHTRDKAKALAKALGY-FQKMKGMERCKPNIVTYNILLRACA 231
+G +PD + N+++ +L D K++G +QK++ KP+ TYN L+
Sbjct: 942 EAGFQPDLQICNSILKLYLGIED-----FKSMGIIYQKIQDAS-LKPDEETYNTLIIMYC 995
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ R ++ +L ++ L P + TY ++ A+ K M ++ E + ++SN K D
Sbjct: 996 RDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRA 1055
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
++L++ +Y K E + + S +PT+ T + ++++YGK+ +AE V + +
Sbjct: 1056 FYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNL 1115
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+ Y +I Y + E E+ + G + + A ++
Sbjct: 1116 RTTGVVLDTLPYSSVIDAYLKKGDFKAGIEKLTEMKEAGIEPDHRIWTCFIRAATLSEGT 1175
Query: 412 TEADLLFENSHNMG 425
EA +L + G
Sbjct: 1176 NEAIVLLNALQDAG 1189
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/302 (19%), Positives = 131/302 (43%), Gaps = 9/302 (2%)
Query: 179 DPSVYNALITAH--LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
D SVY ++ + L KA++L +L Q+ M+R +N L+ A A +
Sbjct: 773 DISVYIDIVETYGKLKIWQKAESLVGSLR--QRCSKMDR-----KVWNALIHAYAFSGCY 825
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
++ A+F + +P + + NG++ A + + E+ V+ ++ K + L
Sbjct: 826 ERARAIFNTMMRDGPSPTVDSVNGLLQALIVDRRLNELYVVIQELQDMGLKISKSSILLT 885
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
++++ + ++++++ + + PT+ + M+ K + E + +M +
Sbjct: 886 LEAFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGF 945
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
P I+ +Y ++ I+ ++ T N ++ YC + P E
Sbjct: 946 QPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFS 1005
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
L ++G+ P TY+ L A+ K M E ++L + + NG ++ F+ ++T+
Sbjct: 1006 LMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYR 1065
Query: 477 SS 478
+S
Sbjct: 1066 TS 1067
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/388 (19%), Positives = 160/388 (41%), Gaps = 50/388 (12%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+R + D Y+ +I + GK+G+ AM ++ +M++SG PD Y LI + KA
Sbjct: 419 KRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLI----DSLGKA 474
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+ +A +M KP + TY+ L+ A A+A ++ F + S + PD
Sbjct: 475 SKVEEAANVMSEMLDAG-VKPTLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLA 533
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y+ ++D + + +K+ + M PD + +++ + + +D ++++ + +
Sbjct: 534 YSVMLDFFLRFNEMKKAMGLYHEMIREGFTPDNGLYEVMMHALVRENMWDVVDRIIRDME 593
Query: 318 H-SKEKPTLPTFNSMIINYG---------KARLQGKAEY---VFQKMT------------ 352
S P + +S+++ G K + E +F +
Sbjct: 594 ELSGMNPQV--ISSVLVKGGCYDHAAKMLKVAISNGYELDHEIFLSIMSSYSSSARYSEA 651
Query: 353 ------AMKYTPSFITY--ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
+ ++ P+ I E +I + + A E + +LG+ + ++++
Sbjct: 652 CELLEFSREHAPNDIQMITEALIIILCKAKKLDAALEEYRSKGELGQFRSCTMYESLIQE 711
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
N L A +F + GV Y+ + Y + ++ E LL E+NGI+ +
Sbjct: 712 CIQNELFDVASQIFSDMRFNGVESSECLYQGMVSVYCRMDLPETAHHLLYHAEKNGIILD 771
Query: 465 KRF--FLEALETF--------SSSLAGS 482
+++ +ET+ + SL GS
Sbjct: 772 NDISVYIDIVETYGKLKIWQKAESLVGS 799
>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 125/259 (48%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
KP++ +N+L+ A + + + F + + P ++N +M AY + G ++ E
Sbjct: 98 KPDVGCFNMLMDAYGRTKQWTEAENTFHLMKKFQCLPTETSFNVLMAAYSRGGQLERAER 157
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
VL MK + C P ++T+N ++ K ++ E VF+ + + P + TF MI YG
Sbjct: 158 VLHEMKESNCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQNRGVPPAVNTFTLMINIYG 217
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
KA KAE++FQ M PS TY +I + N RA EIF EL +G +
Sbjct: 218 KAHHSAKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIY 277
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
T NA+LEAY G P A +FE GV D +Y +L A+ +A + Q + M
Sbjct: 278 TYNALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSM 337
Query: 457 EQNGIVPNKRFFLEALETF 475
++ G P + + L F
Sbjct: 338 KKVGFKPTMKSHILLLSAF 356
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 149/318 (46%), Gaps = 5/318 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ + V+ K G +LA +F EM+N G P + + +I + KA AKA F
Sbjct: 174 YNTYLEVLNKSGSWQLAEDVFREMQNRGVPPAVNTFTLMINIY----GKAHHSAKAEHLF 229
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
Q M+ C P++ TY L+ A A+ N + +F EL PDIYTYN +++AY +
Sbjct: 230 QSMR-KALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVGFVPDIYTYNALLEAYSR 288
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + V M K D +++N+LID++G+ + ++ S+ KPT+ +
Sbjct: 289 GGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKS 348
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
++ + KA AE +++ +M P + ++ YG + + +++ +
Sbjct: 349 HILLLSAFVKAGRVTDAENFVRRLESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQ 408
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ TLN ++ Y G A+ +F + + G TPD ++ L AY+K +
Sbjct: 409 GSVCKPDIITLNTLINVYAQGGYIERAEEIFNSLESKGFTPDVMSWTSLMGAYSKRKLYR 468
Query: 448 LVQKLLKRMEQNGIVPNK 465
+ ++M G +P++
Sbjct: 469 KCVSVYQKMLIAGCIPDR 486
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 160/325 (49%), Gaps = 13/325 (4%)
Query: 171 MRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRAC 230
++ S +PD +N L+ A+ T K +A F MK + C P ++N+L+ A
Sbjct: 92 LQGSMFKPDVGCFNMLMDAYGRT----KQWTEAENTFHLMKKFQ-CLPTETSFNVLMAAY 146
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
++ +++ + E+ ES +P + TYN ++ K+G + E V M++ P +
Sbjct: 147 SRGGQLERAERVLHEMKESNCSPGLVTYNTYLEVLNKSGSWQLAEDVFREMQNRGVPPAV 206
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
TF L+I+ YGK K E +F+S+ + P+L T+ ++I + + +AE +F +
Sbjct: 207 NTFTLMINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAE 266
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
+ ++ + P TY ++ Y + + A+E+F+ + + G + N +++A+ GL
Sbjct: 267 LQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGL 326
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
++A ++++ +G P ++ LL A+ KA + ++R+E G+ P+ F
Sbjct: 327 ISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGRVTDAENFVRRLESMGVEPDTFMF-- 384
Query: 471 ALETFSSSLAGSQSGSAKTDLTRSL 495
+SL G+ S + D SL
Sbjct: 385 ------NSLLGAYGNSGRMDKMESL 403
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 156/347 (44%), Gaps = 5/347 (1%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
E + KW + ++ W+ + + D G ++ L+ G+ Q A F M+ C
Sbjct: 74 EFRRQRKWRSAIVIYEWILQGSMFKPDVGCFNMLMDAYGRTKQWTEAENTFHLMKKFQCL 133
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
P + +N L+ A+ + L +A +MK C P +VTYN L ++ +
Sbjct: 134 PTETSFNVLMAAY----SRGGQLERAERVLHEMK-ESNCSPGLVTYNTYLEVLNKSGSWQ 188
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+F+E+ + P + T+ +++ YGK + E + M+ C P + T+ LI
Sbjct: 189 LAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYTALI 248
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+++ + + E++F L P + T+N+++ Y + A+ VF+ M
Sbjct: 249 NAHAREGNCVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETMLEAGVK 308
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
++Y +I +G +S A+ I+D + K+G + + +L A+ G T+A+
Sbjct: 309 ADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGRVTDAENF 368
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+MGV PD+ + L AY + + ++ L + M+ + P+
Sbjct: 369 VRRLESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQGSVCKPD 415
>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 180/403 (44%), Gaps = 46/403 (11%)
Query: 104 VKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRL 163
V++ +++CF++ + +G+ + W + LEVF W+ + W+ + + + ++ V+G+ Q L
Sbjct: 152 VQMTPTDYCFVV-KSVGQ-ESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESL 209
Query: 164 AMWLFSE----------------------------------MRNSGCRPDPSVYNALITA 189
A+ +F+ MR GC PD +N LI A
Sbjct: 210 AVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELLDAMRQRGCVPDLISFNTLINA 269
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
L + L L + G+ +P+ +TYN LL AC++ N++ +F+++
Sbjct: 270 RLKSGGLTPNLVVELLDMVRNSGL---RPDAITYNTLLSACSRDSNLEGAVKVFEDMEAH 326
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
PD++TYN ++ YG+ G+ E E + ++ PD +T+N L+ ++ + + +K+
Sbjct: 327 RCQPDLWTYNAMISVYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKV 386
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK----YTPSFITYEC 365
++V++ + T+N++I YGK QG+ + Q MK P ITY
Sbjct: 387 KEVYQQMQKMGFGKDEMTYNTIIHMYGK---QGQLDLALQLYKDMKGLSGRNPDAITYTV 443
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+I G + A + E+ +G + T +A++ Y G EA+ F G
Sbjct: 444 LIDSLGKANRSVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSG 503
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
PD+ Y ++ + N L + M +G P+ +
Sbjct: 504 TKPDNLAYSVMLDVLLRGNETRKAWVLYRDMISDGHTPSHSLY 546
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 162/347 (46%), Gaps = 6/347 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ E GK W + V + +Q D ++ L++ + G A +F+ M
Sbjct: 758 IIEAYGKLKLWQKAESVVGNL-RQSGRTPDLKTWNSLMSAYAECGCYERARAIFNTMMRD 816
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P N L+ A L + + L + Q M G + K +I+ ++L A A+A
Sbjct: 817 GPSPTVESINKLLHA-LCVDGRLEELYVVVEELQDM-GFKISKSSIL---LMLDAFARAG 871
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
N+ +VN ++ + + P I Y +++ K +++ E ++S M+ K ++ +N
Sbjct: 872 NIFEVNKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWN 931
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++ Y + + K QV++ + S +P T+N++II Y + R + + Q+M +
Sbjct: 932 SMLKMYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEGYSLMQQMRNL 991
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P TY+ +I+ +G + +A ++F+EL G + S + M++ +G ++A
Sbjct: 992 GLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKA 1051
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ L + N G+ P +T LL +Y+ + + +K+L ++ +
Sbjct: 1052 EKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKNTEV 1098
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/360 (18%), Positives = 153/360 (42%), Gaps = 31/360 (8%)
Query: 140 WYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL-----HTR 194
W + +Y L+ A +FSE+R SGC P SV +++ + T
Sbjct: 676 WCFGGSTMYETLLHCCVANEHYAEASQVFSELRLSGCEPSESVCKSMVVVYCKLGFPETA 735
Query: 195 DKAKALAKALGY--------------FQKMKGMERCK------------PNIVTYNILLR 228
+ A+ G+ + K+K ++ + P++ T+N L+
Sbjct: 736 YQVVNQAETKGFHFACSPMYTDIIEAYGKLKLWQKAESVVGNLRQSGRTPDLKTWNSLMS 795
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
A A+ ++ A+F + +P + + N ++ A +G ++E+ V+ ++ K
Sbjct: 796 AYAECGCYERARAIFNTMMRDGPSPTVESINKLLHALCVDGRLEELYVVVEELQDMGFKI 855
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
+ L++D++ + ++ +++ S+ + PT+ + MI K + AE +
Sbjct: 856 SKSSILLMLDAFARAGNIFEVNKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMV 915
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
+M + + ++ MY ++ + +++ + + G + +T N ++ YC +
Sbjct: 916 SEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCRD 975
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
P E L + N+G+ P TYK L A+ K E ++L + + G+ ++ F+
Sbjct: 976 RRPEEGYSLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFY 1035
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 143/334 (42%), Gaps = 5/334 (1%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
+V + + ++ A + +Y+ +I GK + A + +R SG PD +N+L++A
Sbjct: 737 QVVNQAETKGFHFACSPMYTDIIEAYGKLKLWQKAESVVGNLRQSGRTPDLKTWNSLMSA 796
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ + +A F M + P + + N LL A ++++ + +EL +
Sbjct: 797 YA----ECGCYERARAIFNTMM-RDGPSPTVESINKLLHALCVDGRLEELYVVVEELQDM 851
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+ ++DA+ + G I E+ + S MK+ P I + ++I+ K +
Sbjct: 852 GFKISKSSILLMLDAFARAGNIFEVNKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA 911
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
E + + + K L +NSM+ Y K V+Q++ P TY +I M
Sbjct: 912 EIMVSEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIM 971
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
Y + ++ LG D K+ T +++ A+ +A+ LFE + G+ D
Sbjct: 972 YCRDRRPEEGYSLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLD 1031
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
S Y + K + +KLL+ M+ GI P
Sbjct: 1032 RSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEP 1065
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 139/323 (43%), Gaps = 38/323 (11%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
++VF M+ R D Y+ +I+V G+ G A LF E+ G PD YN+L+
Sbjct: 317 VKVFEDMEAHRCQ-PDLWTYNAMISVYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLY 375
Query: 189 AH-------------------------------LHTRDKAKALAKALGYFQKMKGMERCK 217
A +H K L AL ++ MKG+
Sbjct: 376 AFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRN 435
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+ +TY +L+ + +A + AL E+ + + P + TY+ ++ Y K G +E E
Sbjct: 436 PDAITYTVLIDSLGKANRSVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDT 495
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
S M + KPD + +++++D + K +++ ++ P+ + MI+ K
Sbjct: 496 FSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWVLYRDMISDGHTPSHSLYELMILGLMK 555
Query: 338 ARLQGKAEYVFQKMTAM-KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
+ + M + P I+ + + G C +++ AR++ ++ G +++
Sbjct: 556 ENRSDDVQKTIRDMEELCGMNPLEISS---VLVKGECFDLA-ARQLKVAITN-GYELEND 610
Query: 397 TLNAMLEAYCMNGLPTEADLLFE 419
TL ++L +Y +G +EA L E
Sbjct: 611 TLLSILGSYSSSGRHSEAFELLE 633
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 156/371 (42%), Gaps = 28/371 (7%)
Query: 95 PLVRTLNKYVKVV----RSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSK 150
P V ++NK + + R E +++ EEL Q + I+ + I
Sbjct: 820 PTVESINKLLHALCVDGRLEELYVVVEEL----------------QDMGFKISKSSILLM 863
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
L A + G ++S M+ +G P +Y +I K K + A +M
Sbjct: 864 LDA-FARAGNIFEVNKIYSSMKAAGYLPTIRLYRMMIELLC----KGKRVRDAEIMVSEM 918
Query: 211 KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
+ K + +N +L+ + + +++ + ES L PD TYN ++ Y ++
Sbjct: 919 EEA-NFKVELAIWNSMLKMYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRR 977
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
+E S++ +M++ P + T+ LI ++GK++ ++ EQ+F+ L+ K +++
Sbjct: 978 PEEGYSLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHT 1037
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
M+ + KAE + Q M P+ T ++ Y N A ++ L
Sbjct: 1038 MMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKNTE 1097
Query: 391 KDMKVSTLNAMLEAYCMN-GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
++ +++++AY + + + L E G+ PD + +A + + K V
Sbjct: 1098 VELTTLPYSSVIDAYLRSKDYKSGIERLLEMKKE-GLEPDHRIWTCFVRAASFSKEKSEV 1156
Query: 450 QKLLKRMEQNG 460
LLK ++ G
Sbjct: 1157 MLLLKALQDIG 1167
>gi|356508608|ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 879
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 161/313 (51%), Gaps = 7/313 (2%)
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
F W+++Q + D Y+ ++ ++G+ + L +M GC+P+ YN LI
Sbjct: 370 FCWLKRQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLI---- 425
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
H+ +A L +AL F +M+ M C+P+ VTY L+ A+A +D ++++ + E L
Sbjct: 426 HSYGRANYLREALNVFNQMQEMG-CEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGL 484
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
+PD +TY+ +++ GK+G + + M C P+I+T+N+LI K + + +
Sbjct: 485 SPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALE 544
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+++ + ++ KP T++ ++ G +AE VF +M + P Y ++ ++G
Sbjct: 545 LYRDMQNAGFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNHWVPDEPVYGLLVDLWG 604
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC-MNGLPTEADLLFENSHNMGVTPDS 430
NV +A E + + + G V T N++L A+ ++ LP +LL +N +G+ P
Sbjct: 605 KAGNVEKAWEWYHTMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYNLL-QNMVTLGLNPSL 663
Query: 431 STYKLLYKAYTKA 443
TY LL T+A
Sbjct: 664 QTYTLLLSCCTEA 676
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 118/262 (45%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A+G+F +K + TY ++ +AR +N L +++ + P++ TYN ++
Sbjct: 366 AVGFFCWLKRQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLI 425
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+YG+ ++E +V ++M+ C+PD +T+ LID + K D +++ +
Sbjct: 426 HSYGRANYLREALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLS 485
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P T++ MI GK+ A +F +M P+ +TY +I + N A E+
Sbjct: 486 PDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALEL 545
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+ ++ G T + ++E G EA+ +F PD Y LL + K
Sbjct: 546 YRDMQNAGFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNHWVPDEPVYGLLVDLWGK 605
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
A E + M + G++PN
Sbjct: 606 AGNVEKAWEWYHTMLRAGLLPN 627
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%)
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
D +TY ++ G+ + +L +M + C+P+++T+N LI SYG+ + VF
Sbjct: 382 DGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLREALNVF 441
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
+ +P T+ ++I + KA A ++++M + +P TY +I G
Sbjct: 442 NQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKS 501
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
N+S A +F E+ G + T N ++ A L+ + N G PD TY
Sbjct: 502 GNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQNAGFKPDKVTY 561
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
++ + E + + M QN VP++ +
Sbjct: 562 SIVMEVLGHCGYLEEAEAVFFEMRQNHWVPDEPVY 596
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 103/230 (44%), Gaps = 9/230 (3%)
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC----KP----DIITFNLLIDSYGKRQAF 306
+Y N +DAY N ++K+++ S C +P D T+ ++ G+ + F
Sbjct: 341 LYNLNFSIDAYQANQILKQLQD-HSVAVGFFCWLKRQPGFWHDGHTYTTMVGILGRAREF 399
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ ++ + ++ +P + T+N +I +YG+A +A VF +M M P +TY +
Sbjct: 400 GAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLREALNVFNQMQEMGCEPDRVTYCTL 459
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I ++ + A +++ + ++G T + M+ +G + A LF + G
Sbjct: 460 IDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGC 519
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
P+ TY +L KA + +L + M+ G P+K + +E
Sbjct: 520 VPNIVTYNILIALQAKARNYQTALELYRDMQNAGFKPDKVTYSIVMEVLG 569
>gi|297839351|ref|XP_002887557.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333398|gb|EFH63816.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 845
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 160/325 (49%), Gaps = 5/325 (1%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L + D + L F W+++Q + D Y+ ++ +G+ Q L EM GC+P
Sbjct: 323 LKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINRLLDEMVKDGCKP 382
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
+ YN LI H+ +A L +A+ F++M+ C+P+ VTY L+ A+A +D
Sbjct: 383 NTVTYNRLI----HSYGRANYLNEAMNVFKQMQ-EAGCEPDRVTYCTLIDIHAKAGFLDI 437
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+++ + + L+PD +TY+ +++ GK G + + M C P+++TFN++I
Sbjct: 438 AMDMYQRMQAAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIA 497
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
+ K + ++ ++++ + ++ +P T++ ++ G +AE VF +M + P
Sbjct: 498 LHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVP 557
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
Y ++ ++G NV +A + + E+ G V T N++L + +EA L
Sbjct: 558 DEPVYGLLVDLWGKAGNVEKAWQWYQEMLHAGLRPNVPTCNSLLSTFLRVHRMSEAYNLL 617
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKA 443
++ +G+ P TY LL T A
Sbjct: 618 QSMLALGLHPSLQTYTLLLSCCTDA 642
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 121/275 (44%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
A ALG+F +K K + TY ++ +A+ +N L E+ + P+ TYN
Sbjct: 330 ANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYNR 389
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ +YG+ + E +V +M+ C+PD +T+ LID + K D +++ + +
Sbjct: 390 LIHSYGRANYLNEAMNVFKQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAG 449
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P T++ +I GKA A +F +M TP+ +T+ +I ++ N A
Sbjct: 450 LSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETAL 509
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+++ ++ G T + ++E G EA+ +F PD Y LL +
Sbjct: 510 KLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLW 569
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
KA E + + M G+ PN L TF
Sbjct: 570 GKAGNVEKAWQWYQEMLHAGLRPNVPTCNSLLSTF 604
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 127/322 (39%), Gaps = 45/322 (13%)
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
++H+ D ++ G+ + + M R P T + C V+ V+ + +
Sbjct: 243 NVHSSDDRTIISSVEGFGKPSREMMRVTPG--TAPTPRQYCNPGYVVENVSGILRRFKWG 300
Query: 250 ILAPD-IYTYNGVMDAYGKNGMIKEMES-------------------------------- 276
A + ++ + MDAY N ++K+M++
Sbjct: 301 HAAEEALHNFGFRMDAYQANQVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLG 360
Query: 277 ----------VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+L M + CKP+ +T+N LI SYG+ ++ VFK + + +P
Sbjct: 361 RAKQFGAINRLLDEMVKDGCKPNTVTYNRLIHSYGRANYLNEAMNVFKQMQEAGCEPDRV 420
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T+ ++I + KA A ++Q+M A +P TY II G ++ A +F E+
Sbjct: 421 TYCTLIDIHAKAGFLDIAMDMYQRMQAAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEM 480
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
G + T N M+ + A L+ + N G PD TY ++ +
Sbjct: 481 VGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFL 540
Query: 447 ELVQKLLKRMEQNGIVPNKRFF 468
E + + M++ VP++ +
Sbjct: 541 EEAEGVFAEMQRKNWVPDEPVY 562
>gi|356532886|ref|XP_003535000.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
chloroplastic-like [Glycine max]
Length = 485
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 157/364 (43%), Gaps = 41/364 (11%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
W LE+F +++Q +Y Y KLI ++GK Q A LF+ + GC +Y
Sbjct: 108 WSIALELFDMLREQPYYQPREDTYMKLIVLLGKSSQPLRAHELFNSIHEDGCG-STELYT 166
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
ALI A + +AL +M + C+P+I TY+ L++A + + V LF
Sbjct: 167 ALIAAFCQNN----LVDEALSILDEMMNLPSCQPDIFTYSTLIKALVDSLKFEMVELLFD 222
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGKR 303
++ + + P+ YT N ++ YGK G +ME ++S M + CKPD+ T N +I +G +
Sbjct: 223 KMAKRSIVPNTYTQNLILSGYGKAGRFDQMEKIVSSMMEGTTCKPDVWTMNTVISVFGDK 282
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
D ME+ + +P TFN +I YG R+ K V Q M +K + TY
Sbjct: 283 GQIDIMEKWYDKFCSFGIQPQRSTFNILIAAYGSKRMYDKMSSVMQCMRRVKCPWTTSTY 342
Query: 364 ECIITMYGYCDNVSRAREIFDEL-----------------------------------SK 388
+I + + FD++ K
Sbjct: 343 NNVIEAFAAVGDAENMERAFDQMYAEGLKADTKTFCFLINGYANAGIFHKVISSVSLAEK 402
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
L + S NA++ A + TE + F++ PD++TY ++ +AY K M +
Sbjct: 403 LQIRVNTSFYNAIISACAKDDALTEMERFFKHMKEKECHPDNTTYSVMIEAYRKEGMNDK 462
Query: 449 VQKL 452
+ L
Sbjct: 463 IHYL 466
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 100/250 (40%), Gaps = 50/250 (20%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
L+ GK+ ++ Q ++ M + D + +I+V G KGQ + + + +
Sbjct: 238 LILSGYGKAGRFDQMEKIVSSMMEGTTCKPDVWTMNTVISVFGDKGQIDIMEKWYDKFCS 297
Query: 174 SGCRPDPSVYNALITAHLHTR--DKAKALAKALGYFQKMKGMER--CKPNIVTYNILLRA 229
G +P S +N LI A+ R DK ++ M+ M R C TYN ++ A
Sbjct: 298 FGIQPQRSTFNILIAAYGSKRMYDKMSSV---------MQCMRRVKCPWTTSTYNNVIEA 348
Query: 230 CAQARNVDQVNALFKELHESILAPDIYT-------------------------------- 257
A + + + F +++ L D T
Sbjct: 349 FAAVGDAENMERAFDQMYAEGLKADTKTFCFLINGYANAGIFHKVISSVSLAEKLQIRVN 408
Query: 258 ---YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME--QV 312
YN ++ A K+ + EME MK +C PD T++++I++Y K DK+ +
Sbjct: 409 TSFYNAIISACAKDDALTEMERFFKHMKEKECHPDNTTYSVMIEAYRKEGMNDKIHYLEQ 468
Query: 313 FKSLMHSKEK 322
K +M S +K
Sbjct: 469 EKRMMMSDDK 478
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 173/382 (45%), Gaps = 6/382 (1%)
Query: 96 LVRTLNKYVKVVRSEH-CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAV 154
+ R L ++++ EH C + LG+ K E+F M K Y+ L++
Sbjct: 16 VFRFLQEHLEYELKEHNCVTIISILGREGKLGLAREIFEGMSKAG-VAPSVHAYTALLSG 74
Query: 155 MGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME 214
K+G + A LF M+ GC P+ YN LI A +A L +G F++MK
Sbjct: 75 YAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINA---CTKRAYRLPDLVGLFEEMK-QA 130
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
+PN +TYN ++ AC D + + KE+ P++ +Y ++++ G++G + E
Sbjct: 131 GVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSLGRSGRLDEA 190
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
+ MK P+ T+N L+ +Y + ++K +F + P L T+N++I
Sbjct: 191 VELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDM 250
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
G+ L +AE VF +M TP +TY ++ Y RAR++ + + G
Sbjct: 251 CGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPD 310
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
+ T N +L+A G +EA +F G +P+ ++ L Y + E ++
Sbjct: 311 LWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLGYFEEAERAWV 370
Query: 455 RMEQNGIVPNKRFFLEALETFS 476
M G VPN + + ++S
Sbjct: 371 EMRATGCVPNATAYCGLMNSYS 392
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 161/338 (47%), Gaps = 10/338 (2%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L++ R M +R AD YS +I + + G A+ LF EM G + YN+L+
Sbjct: 190 LDLLRKMD-ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVG 248
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
KA + + M + PN++T+N+L+ + + + N L+KE+
Sbjct: 249 GLC----KAGKWNDGVQLLKDMTS-RKIIPNVITFNVLIDVFVKEGKLQEANELYKEMIT 303
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
++P+ TYN +MD Y + E ++L M N C PDI+TF LI Y K + D+
Sbjct: 304 KGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDE 363
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
++F+ + T++ ++ + ++ AE +FQ+M ++ P +TY I
Sbjct: 364 GMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYG--IL 421
Query: 369 MYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
+ G CDN + +A EIF++L K ++ + ++E C G +A LF + GV
Sbjct: 422 LDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGV 481
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
P+ TY ++ K LL++ME++G PN
Sbjct: 482 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPN 519
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 144/307 (46%), Gaps = 9/307 (2%)
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
+T A + ++ G PD + +N LI ++A+ + C+PN
Sbjct: 115 KTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVEN-----GCQPN 169
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+VTYN ++ ++ + L +++ E + D++TY+ ++D+ ++G I S+
Sbjct: 170 VVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 229
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
M++ K ++T+N L+ K ++ Q+ K + K P + TFN +I + K
Sbjct: 230 EMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEG 289
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVST 397
+A ++++M +P+ ITY + M GYC + +S A + D + + + T
Sbjct: 290 KLQEANELYKEMITKGISPNTITYNSL--MDGYCMQNRLSEANNMLDLMVRNNCSPDIVT 347
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
++++ YC E LF G+ ++ TY +L + + ++ E+ ++L + M
Sbjct: 348 FTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMV 407
Query: 458 QNGIVPN 464
G++P+
Sbjct: 408 SLGVLPD 414
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 120/262 (45%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+P+ T+N L+ V + L + E+ P++ TYN +++ K+G
Sbjct: 132 EPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALD 191
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+L +M K D+ T++ +IDS + D +FK + K +L T+NS++
Sbjct: 192 LLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLC 251
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
KA + + MT+ K P+ IT+ +I ++ + A E++ E+ G
Sbjct: 252 KAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTI 311
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
T N++++ YCM +EA+ + + +PD T+ L K Y K + KL +++
Sbjct: 312 TYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKI 371
Query: 457 EQNGIVPNKRFFLEALETFSSS 478
+ G+V N + ++ F S
Sbjct: 372 SKRGLVANTVTYSILVQGFCQS 393
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 155/332 (46%), Gaps = 12/332 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L K+ KW +++ + M R I + ++ LI V K+G+ + A L+ EM
Sbjct: 246 LVGGLCKAGKWNDGVQLLKDMT-SRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITK 304
Query: 175 GCRPDPSVYNALITAH-LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G P+ YN+L+ + + R L++A M C P+IVT+ L++ +
Sbjct: 305 GISPNTITYNSLMDGYCMQNR-----LSEANNMLDLMV-RNNCSPDIVTFTSLIKGYCKV 358
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ VD+ LF+++ + L + TY+ ++ + ++G ++ E + M S PD++T+
Sbjct: 359 KRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTY 418
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+L+D +K ++F+ L SK + + +I K A +F +
Sbjct: 419 GILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPC 478
Query: 354 MKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P+ +TY +I+ G C ++S A + ++ + G + T N ++ A+ +G
Sbjct: 479 KGVKPNVMTYTVMIS--GLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDL 536
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
T + L E + G + D+S+ K++ + A
Sbjct: 537 TASAKLIEEMKSCGFSADASSIKMVIDMLSSA 568
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 96/255 (37%)
Query: 221 VTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSR 280
V Y LR+ D LF+E+ S P + ++ + +
Sbjct: 31 VCYGERLRSGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKK 90
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
M+ N +I T N++I+ + + V +M +P TFN++I
Sbjct: 91 MELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESK 150
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
+A + +M P+ +TY I+ + S A ++ ++ + V T +
Sbjct: 151 VSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYST 210
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
++++ C +G A LF+ G+ TY L KA +LLK M
Sbjct: 211 IIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRK 270
Query: 461 IVPNKRFFLEALETF 475
I+PN F ++ F
Sbjct: 271 IIPNVITFNVLIDVF 285
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 177/393 (45%), Gaps = 42/393 (10%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSE-------------- 170
W + LE++ + RWY + + + +++V+G+ Q LA LF
Sbjct: 60 WQRALELYECLNVARWYAPNPRMLAVMLSVLGRANQPGLAQELFDRAESSIGNCVQVYNS 119
Query: 171 --------------------MRNSGCRPDPSVYNALITAHLHTRDKAK-ALAKALGYFQK 209
M++ GCRPD +N +I A TR + LA +L
Sbjct: 120 LMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKAR--TRGGMQEGLASSLLQDVY 177
Query: 210 MKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG 269
G+ +P+ +TYN L+ AC+ + +F+E+ PDI+TYN ++ YG+ G
Sbjct: 178 AAGL---RPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAG 234
Query: 270 MIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFN 329
++ S+ M+ PD +T+N ++ ++ + +++E++ + ++ T+N
Sbjct: 235 RVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYN 294
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
+MI YGKA + KAE ++ +M P +T+ +I G V+ A +F+++ K
Sbjct: 295 TMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKS 354
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
+ +AM+ AY + ++A+ + GV PD Y ++ + KA M E
Sbjct: 355 QVRPTLQAFSAMICAYAKADMFSDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAEMPEKC 414
Query: 450 QKLLKRMEQNGIVPNKRFFLEALETF--SSSLA 480
L K M +G+ P + + F SSLA
Sbjct: 415 IILYKAMVGSGLKPELSVYAIMVRVFYQKSSLA 447
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 150/301 (49%), Gaps = 9/301 (2%)
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITA-HLHTRDKAKALAKALGYFQKMKGMERCKP 218
Q LA L ++ +G RPD YN LI+A L+ R L+ A+ F++M+ + C P
Sbjct: 165 QEGLASSLLQDVYAAGLRPDTITYNTLISACSLNNR-----LSDAILIFEEMQ-RQGCDP 218
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
+I TYN ++ +A V+ +++F+ + E PD TYN V+ A+ ++G I+E+E +
Sbjct: 219 DIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIR 278
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
M+ +C D IT+N +I YGK K E+++ + P TF +I GKA
Sbjct: 279 GMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKA 338
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
+A +F+ M + P+ + +I Y D S A + + + G +
Sbjct: 339 GFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYAKADMFSDAEHTYSCMLRAGVRPDLLAY 398
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA-YTKANMKELVQKLLKRME 457
+ ML+ + +P + +L++ G+ P+ S Y ++ + Y K+++ E ++ L K M
Sbjct: 399 SVMLDVFFKAEMPEKCIILYKAMVGSGLKPELSVYAIMVRVFYQKSSLAE-IENLSKEMV 457
Query: 458 Q 458
Q
Sbjct: 458 Q 458
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 159/339 (46%), Gaps = 13/339 (3%)
Query: 126 LQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
+ CL F + D+ ++ +IA GK + A +F +++ G + S Y+A
Sbjct: 624 IDCLHAFE--------VKDSAMHVAIIASYGKLKLWQNAEIVFRDLQRHGFAGNTSAYSA 675
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
L++A+ T + +A +AL G++ PN N +L A +A +++ ++
Sbjct: 676 LLSAYAETGNFERA-TRALDNMVA-AGLQ---PNAACANYVLEAFGRAGKAKELSEFYQR 730
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
L E + P+ T+ + A+ +NG ++E S+ +M+ P I F L+ Y +
Sbjct: 731 LPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMREAGFSPSIQVFKALLALYSRETV 790
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
E++ K + + + + +N MI Y K KA VF+ M + +P T+
Sbjct: 791 EIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPDATTFNT 850
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+I +Y V A+ + E+ K G +ST ++ AY +A+L+F++ G
Sbjct: 851 LIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAETG 910
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
PD++ Y ++ Y KA +++++++M+ +G P+
Sbjct: 911 CKPDATAYNVMINVYRKAGEHRKIEEVIEQMKADGFEPS 949
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 172/376 (45%), Gaps = 7/376 (1%)
Query: 89 SFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIY 148
+F E L+ L+ + +V S + GK W VFR +Q+ + +T Y
Sbjct: 616 AFVAHELLIDCLHAF-EVKDSAMHVAIIASYGKLKLWQNAEIVFRDLQRH-GFAGNTSAY 673
Query: 149 SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQ 208
S L++ + G A M +G +P+ + N ++ A KAK L++ ++Q
Sbjct: 674 SALLSAYAETGNFERATRALDNMVAAGLQPNAACANYVLEA-FGRAGKAKELSE---FYQ 729
Query: 209 KMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
++ M PN T+ ++ A ++ N+++ ++++++ E+ +P I + ++ Y +
Sbjct: 730 RLPEMG-ITPNSRTFVVIFHAFSRNGNLEEARSMYRQMREAGFSPSIQVFKALLALYSRE 788
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
+ + E ++ +K + D+ +N +I Y K ++ K VFK + P TF
Sbjct: 789 TVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPDATTF 848
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
N++I+ Y + ++ +A+ + ++M P+ TY +I+ YG A +F +++
Sbjct: 849 NTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKSIAE 908
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
G + N M+ Y G + + + E G P +T +L +Y K
Sbjct: 909 TGCKPDATAYNVMINVYRKAGEHRKIEEVIEQMKADGFEPSLTTIHMLMDSYGKGGATGK 968
Query: 449 VQKLLKRMEQNGIVPN 464
+++L+ + + G+ P+
Sbjct: 969 AEEVLETLPEIGMSPD 984
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 124/281 (44%), Gaps = 8/281 (2%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
PN ++L +A LF + ES + + YN +M Y ++G ++ +
Sbjct: 78 PNPRMLAVMLSVLGRANQPGLAQELF-DRAESSIGNCVQVYNSLMSVYARHGDWNSVQQL 136
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH----SKEKPTLPTFNSMII 333
L RM+ C+PD++TFN++I + R E + SL+ + +P T+N++I
Sbjct: 137 LCRMQDRGCRPDLVTFNIVIKA---RTRGGMQEGLASSLLQDVYAAGLRPDTITYNTLIS 193
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
A +F++M P TY +I++YG V A IF + + G
Sbjct: 194 ACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTP 253
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
T N++L A+ +G E + + + + D TY + Y KA M ++L
Sbjct: 254 DAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELY 313
Query: 454 KRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTRS 494
+M++ G P+ F ++T + +++ + D+ +S
Sbjct: 314 VQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKS 354
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 98/241 (40%), Gaps = 7/241 (2%)
Query: 243 FKELHESILAPDIYTYNGVMD-------AYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
F E E + Y V D +Y + GM E + M + + D
Sbjct: 546 FSEAEEEMRTSQTYGQAQVSDFLKVLVASYDRAGMQDEALARFLDMTTEGLEMDAEVLQT 605
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
+ Y ++ ++ +H+ E ++I +YGK +L AE VF+ +
Sbjct: 606 AVMCYCRKGFAFVAHELLIDCLHAFEVKDSAMHVAIIASYGKLKLWQNAEIVFRDLQRHG 665
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
+ + Y +++ Y N RA D + G + N +LEA+ G E
Sbjct: 666 FAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNAACANYVLEAFGRAGKAKELS 725
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
++ MG+TP+S T+ +++ A+++ E + + ++M + G P+ + F L +
Sbjct: 726 EFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMREAGFSPSIQVFKALLALY 785
Query: 476 S 476
S
Sbjct: 786 S 786
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 70/371 (18%), Positives = 151/371 (40%), Gaps = 47/371 (12%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D+ ++ LI +GK G A +F +M S RP ++A+I A+ KA + A
Sbjct: 324 DSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYA----KADMFSDA 379
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+ M G+ +P+++ Y+++L +A ++ L+K + S L P++ Y +
Sbjct: 380 EHTYSCMLRAGV---RPDLLAYSVMLDVFFKAEMPEKCIILYKAMVGSGLKPELSVYAIM 436
Query: 262 MDAYGKNGMIKEMESVLSRM---------------------------KSNQCKPDIITFN 294
+ + + + E+E++ M K + + +
Sbjct: 437 VRVFYQKSSLAEIENLSKEMVQSSASLAALSSTLAKGGFYAEAAVVLKISFAQGVAVKVE 496
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMH--SKEKPTLPT--FNSMIINYGKARLQGKAEYVFQK 350
L D G +A K+ + L+H S +P++ + + + KA +AE +
Sbjct: 497 TLNDVLGAFEASGKLSDA-RDLVHAVSSIEPSVAAHLYKRLALMLAKAGRFSEAEE--EM 553
Query: 351 MTAMKYTPSFIT--YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
T+ Y + ++ + ++ Y A F +++ G +M L + YC
Sbjct: 554 RTSQTYGQAQVSDFLKVLVASYDRAGMQDEALARFLDMTTEGLEMDAEVLQTAVMCYCRK 613
Query: 409 GLPTEA-DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
G A +LL + H V DS+ + + +Y K + + + + + ++++G N
Sbjct: 614 GFAFVAHELLIDCLHAFEVK-DSAMHVAIIASYGKLKLWQNAEIVFRDLQRHGFAGNTSA 672
Query: 468 FLEALETFSSS 478
+ L ++ +
Sbjct: 673 YSALLSAYAET 683
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 147/346 (42%), Gaps = 47/346 (13%)
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALGYFQKMKGMERCK 217
+ R + + + ++S C PD YN +I + DKA +L +G
Sbjct: 173 EARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEMGV----------S 222
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P++VTYN ++ +A+ VD+ +F+++ E + P+ TYN ++D K + E V
Sbjct: 223 PDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGV 282
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
+M KP +T+N +ID K QA D+ E VF+ ++ KP T+N++I K
Sbjct: 283 FQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCK 342
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
A+ KAE VFQ+M P +TY II +V RA +F ++ G T
Sbjct: 343 AQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGT 402
Query: 398 LNAMLEAY-----------------------------------CMNGLPTEADLLFENSH 422
N ++ Y C NG EA LF++
Sbjct: 403 YNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMI 462
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G+ P + Y ++ Y K + LL M NGI PN R F
Sbjct: 463 RKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIF 508
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 154/323 (47%), Gaps = 9/323 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I + K A +F +M + G +PD YN +I KA+A+ KA G F
Sbjct: 298 YNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLC----KAQAIDKAEGVF 353
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
Q+M KG+ KP+ +TY I++ +A++VD+ +F+++ + + P+ TYN ++ Y
Sbjct: 354 QQMIDKGV---KPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGY 410
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
G +E+ + M ++ +PD+ T+ LL+D K ++ +F S++ KP++
Sbjct: 411 LSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSV 470
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
+ M+ YGK + + M A +P+ + +I Y + IF +
Sbjct: 471 TIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIK 530
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ + G V T +++A C G +A L F N GVTP++ + L +
Sbjct: 531 MKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDK 590
Query: 446 KELVQKLLKRMEQNGIVPNKRFF 468
E V++L M GI P+ FF
Sbjct: 591 WEKVEELFLEMLNQGIRPDIVFF 613
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 142/317 (44%), Gaps = 5/317 (1%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
I++ +I K+ M +F +M+ G P+ Y LI A K + A+
Sbjct: 507 IFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALC----KLGRVDDAVLQ 562
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F +M E PN V +N L+ ++V LF E+ + PDI +N V+
Sbjct: 563 FNQMIN-EGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLC 621
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K G + E ++ M KPD+I++N LID + D+ ++ ++ + KP +
Sbjct: 622 KEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIV 681
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
++N+++ Y KA A +F++M TP TY I+ S ARE++ +
Sbjct: 682 SYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNM 741
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
K K + T + +L+ +C N EA +F++ +M + D T+ ++ K K
Sbjct: 742 IKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRK 801
Query: 447 ELVQKLLKRMEQNGIVP 463
E L + NG+VP
Sbjct: 802 EDAMDLFAAIPANGLVP 818
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 143/325 (44%), Gaps = 13/325 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ +I + K A +F +M + G +P+ YN LI +L T + +
Sbjct: 364 DNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVV--- 420
Query: 204 LGYFQKMKGM--ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
Q++K M +P++ TY +LL + ++ +LF + + P + Y +
Sbjct: 421 ----QRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIM 476
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ YGK G + EM +L+ M +N P+ FN +I +Y KR D++ +F +
Sbjct: 477 LHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGL 536
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRA 379
P + T+ ++I K A F +M TP+ + + ++ YG C D +
Sbjct: 537 SPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLV--YGLCTVDKWEKV 594
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
E+F E+ G + N +L C G EA L ++ MG+ PD +Y L
Sbjct: 595 EELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDG 654
Query: 440 YTKANMKELVQKLLKRMEQNGIVPN 464
+ A+ + KLL M G+ PN
Sbjct: 655 HCFASRMDEAVKLLDGMVSAGLKPN 679
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 157/341 (46%), Gaps = 12/341 (3%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ + +F M KQ+ + Y LI + K G+ A+ F++M N G P+ V+N+L
Sbjct: 523 EVMHIFIKM-KQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSL 581
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYN-ILLRACAQARNVDQVNALFKE 245
+ L T DK + + + F +M + +P+IV +N +L C + R V + L
Sbjct: 582 VYG-LCTVDKWEKVEE---LFLEMLN-QGIRPDIVFFNTVLCNLCKEGR-VMEARRLIDS 635
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ L PD+ +YN ++D + + E +L M S KP+I+++N L+ Y K
Sbjct: 636 MVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGR 695
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
D +F+ ++ P + T+N+++ ++ +A ++ M + S TY
Sbjct: 696 IDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYS- 754
Query: 366 IITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
I + G+C N A +IF L + + + T N M++ G +A LF
Sbjct: 755 -IILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPA 813
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G+ P TY+L+ + + E + L ME++G PN
Sbjct: 814 NGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPN 854
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 140/315 (44%), Gaps = 9/315 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y L+ + K G+ A LF M G +P ++Y + LH K AL++
Sbjct: 434 DVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIM----LHGYGKKGALSEM 489
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
M PN +N ++ A A+ +D+V +F ++ + L+P++ TY ++D
Sbjct: 490 HDLLNLMVA-NGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLID 548
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
A K G + + ++M + P+ + FN L+ ++K+E++F +++ +P
Sbjct: 549 ALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRP 608
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ FN+++ N K +A + M M P I+Y +I + + + A ++
Sbjct: 609 DIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLL 668
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL----LYKA 439
D + G + + N +L YC G A LF GVTP TY L+++
Sbjct: 669 DGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRS 728
Query: 440 YTKANMKELVQKLLK 454
+ +EL ++K
Sbjct: 729 GRFSEARELYVNMIK 743
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/369 (19%), Positives = 131/369 (35%), Gaps = 83/369 (22%)
Query: 97 VRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIA-DTGIYSKLIAVM 155
VR LN+ + VV C S L R ++ +A D YS +I
Sbjct: 43 VRALNQLLSVVSRAKC--------SSSSKLAVSRFNRMLRDCSNKVAPDCCTYSIVIGCF 94
Query: 156 GKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER 215
+ G+ L F + +G R D V N L+ T+ +A+ L ++
Sbjct: 95 CRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVG---- 150
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
C+ +V+YN LL+ R ++ L LH + D
Sbjct: 151 CRLGVVSYNTLLKGLCDRRRAEEAREL---LHMMVDGQD--------------------- 186
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
+ C PD++++N++I+ + FN
Sbjct: 187 --------SSCSPDVVSYNIVINGF---------------------------FN------ 205
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
+G+ + + M +P +TY II V RA ++F ++ + G
Sbjct: 206 -----EGQVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNN 260
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
T N +++ C A+ +F+ + GV P + TY + KA + + + ++
Sbjct: 261 VTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQ 320
Query: 456 MEQNGIVPN 464
M G+ P+
Sbjct: 321 MIDRGVKPD 329
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 5/185 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ K G+ A LF EM G P YN ++ R + A+ L Y
Sbjct: 683 YNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLF--RSGRFSEAREL-YV 739
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+K R +I TY+I+L + D+ +F+ L L DI T+N ++D K
Sbjct: 740 NMIK--SRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFK 797
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G ++ + + + +N P ++T+ L+ ++ + + ++++ +F + S P
Sbjct: 798 GGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHM 857
Query: 328 FNSMI 332
N++I
Sbjct: 858 LNALI 862
>gi|15221377|ref|NP_177613.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207514|sp|Q9SSF9.1|PP123_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74750
gi|5882748|gb|AAD55301.1|AC008263_32 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332197508|gb|AEE35629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 855
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 160/325 (49%), Gaps = 5/325 (1%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L + D + L F W+++Q + D Y+ ++ +G+ Q L EM GC+P
Sbjct: 333 LKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKP 392
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
+ YN LI H+ +A L +A+ F +M+ C+P+ VTY L+ A+A +D
Sbjct: 393 NTVTYNRLI----HSYGRANYLKEAMNVFNQMQ-EAGCEPDRVTYCTLIDIHAKAGFLDI 447
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+++ + E+ L+PD +TY+ +++ GK G + + M C P+++TFN++I
Sbjct: 448 AMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIA 507
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
+ K + ++ ++++ + ++ +P T++ ++ G +AE VF +M + P
Sbjct: 508 LHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVP 567
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
Y ++ ++G NV +A + + + + G V T N++L + +EA L
Sbjct: 568 DEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLL 627
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKA 443
++ +G+ P TY LL T A
Sbjct: 628 QSMLALGLHPSLQTYTLLLSCCTDA 652
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 160/351 (45%), Gaps = 41/351 (11%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L G+++ + + VF MQ+ D Y LI + K G +AM ++ M+ +
Sbjct: 400 LIHSYGRANYLKEAMNVFNQMQEAGCE-PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEA 458
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G PD Y+ +I KA L A F +M G + C PN+VT+NI++ A+AR
Sbjct: 459 GLSPDTFTYSVIINC----LGKAGHLPAAHRLFCEMVG-QGCTPNLVTFNIMIALHAKAR 513
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
N + L++++ + PD TY+ VM+ G G ++E E V + M+ PD +
Sbjct: 514 NYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYG 573
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
LL+D +GK DK Q +++++ + +P +PT NS++ + + +A + Q M A+
Sbjct: 574 LLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLAL 633
Query: 355 KYTPSFITYECIITM---------YGYCDNV-------------------SRAREIFDEL 386
PS TY +++ G+C + +++ D +
Sbjct: 634 GLHPSLQTYTLLLSCCTDARSNFDMGFCGQLMAVSGHPAHMFLLKMPPAGPDGQKVRDHV 693
Query: 387 SKL-------GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
S ++ K ++A+++ +GL EA ++E + V PD+
Sbjct: 694 SNFLDFMHSEDRESKRGLMDAVVDFLHKSGLKEEAGSVWEVAAGKNVYPDA 744
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 124/275 (45%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
A ALG+F +K K + TY ++ +A+ ++N L E+ P+ TYN
Sbjct: 340 ANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNR 399
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ +YG+ +KE +V ++M+ C+PD +T+ LID + K D +++ + +
Sbjct: 400 LIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAG 459
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P T++ +I GKA A +F +M TP+ +T+ +I ++ N A
Sbjct: 460 LSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETAL 519
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+++ ++ G T + ++E G EA+ +F PD Y LL +
Sbjct: 520 KLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLW 579
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
KA + + + M Q G+ PN L TF
Sbjct: 580 GKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTF 614
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/321 (19%), Positives = 124/321 (38%), Gaps = 45/321 (14%)
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
+H+ D ++ G+ + + M + P T + C V+ V+++ +
Sbjct: 254 VHSSDDRTIISSVEGFGKPSREMMKVTPR--TAPTPRQHCNPGYVVENVSSILRRFKWGH 311
Query: 251 LAPD-IYTYNGVMDAYGKNGMIKEMES--------------------------------- 276
A + ++ + MDAY N ++K+M++
Sbjct: 312 AAEEALHNFGFRMDAYQANQVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGR 371
Query: 277 ---------VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+L M + CKP+ +T+N LI SYG+ + VF + + +P T
Sbjct: 372 AKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVT 431
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ ++I + KA A ++Q+M +P TY II G ++ A +F E+
Sbjct: 432 YCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMV 491
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G + T N M+ + A L+ + N G PD TY ++ + E
Sbjct: 492 GQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLE 551
Query: 448 LVQKLLKRMEQNGIVPNKRFF 468
+ + M++ VP++ +
Sbjct: 552 EAEGVFAEMQRKNWVPDEPVY 572
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 158/322 (49%), Gaps = 11/322 (3%)
Query: 146 GIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALG 205
G++ L V+ G A F +M P N L LH K+ AL
Sbjct: 182 GVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNEL----LHRLSKSSKGGLALS 237
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+F+ M + P++ TYN+++ A+ +++ +LF+E+ L PDI TYN ++D Y
Sbjct: 238 FFKDMV-VAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGY 296
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK--- 322
GK GM+ SV MK C+PD+IT+N LI+ + K F+++ Q F+ L K++
Sbjct: 297 GKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCK---FERIPQAFEYLHGMKQRGLQ 353
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P + T++++I + KA + +A F M + P+ TY +I +++ A ++
Sbjct: 354 PNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKL 413
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
E+ + G ++ + T A+L+ C +G EA+ LF G T + Y L+ Y K
Sbjct: 414 ESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIK 473
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
A M E +L+ M + + P+
Sbjct: 474 AKMMEKAMDILEEMNKKNLKPD 495
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 147/323 (45%), Gaps = 9/323 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI GK G A+ +F EM+++GC PD YN+LI K + + +A
Sbjct: 285 DIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFC----KFERIPQA 340
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
Y MK +PN+VTY+ L+ A +A + + N F ++ L P+ +TY ++D
Sbjct: 341 FEYLHGMK-QRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLID 399
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
A K G + E + S M+ +I+T+ L+D + + E++F +L+ +
Sbjct: 400 ANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTL 459
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRARE 381
+ S+ Y KA++ KA + ++M P + Y I +G C + + +
Sbjct: 460 NQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKI--WGLCRQNEIEDSMA 517
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ E+ G +++AY G TEA L + ++G+ TY +L
Sbjct: 518 VIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLC 577
Query: 442 KANMKELVQKLLKRMEQNGIVPN 464
K + + + M +NG+ PN
Sbjct: 578 KIGLVQQAVRYFDHMTRNGLQPN 600
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 144/356 (40%), Gaps = 26/356 (7%)
Query: 94 EPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIA 153
EP V T N + +CF FE + ++ ++L + KQR + YS LI
Sbjct: 318 EPDVITYNSLI------NCFCKFERIPQAFEYLHGM-------KQRGLQPNVVTYSTLID 364
Query: 154 VMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGM 213
K G A F +M G +P+ Y +LI A+ D +A F+ M
Sbjct: 365 AFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEA-------FKLESEM 417
Query: 214 ERCKPN--IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMI 271
++ N IVTY LL + + + LF L ++ + Y + Y K M+
Sbjct: 418 QQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMM 477
Query: 272 KEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM 331
++ +L M KPD++ + I ++ + V + +M + ++
Sbjct: 478 EKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTL 537
Query: 332 IINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGK 391
I Y K +A + Q+M + + +TY +I V +A FD +++ G
Sbjct: 538 IDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGL 597
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ A+++ C N EA LF + G++PD KL+Y + NMK
Sbjct: 598 QPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPD----KLVYTSLIDGNMKH 649
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 138/316 (43%), Gaps = 7/316 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + + G+ R A LF + +G + +Y +L H KAK + KA+
Sbjct: 429 YTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSL----FHGYIKAKMMEKAMDIL 484
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M + KP+++ Y + + ++ A+ +E+ + L + Y Y ++DAY K
Sbjct: 485 EEMNK-KNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFK 543
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G E ++L M+ K ++T+ +LID K + + F + + +P +
Sbjct: 544 VGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMI 603
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ ++I K +A+ +F +M +P + Y +I N A + + +
Sbjct: 604 YTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMV 663
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS-TYKLLYKAYTKANMK 446
++G ++ + +++ + G A L + G+ PD LL K Y ++
Sbjct: 664 EIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDIN 723
Query: 447 ELVQKLLKRMEQNGIV 462
E + L M + G++
Sbjct: 724 EAL-ALHDDMARRGLI 738
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 95/220 (43%), Gaps = 6/220 (2%)
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
++ P ++ + + GM++E +M + P + + N L+ K
Sbjct: 175 NVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGL 234
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
FK ++ + P++ T+N +I + A +F++M A P +TY +I
Sbjct: 235 ALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLID 294
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM---G 425
YG ++ A +F+E+ G + V T N+++ +C +A FE H M G
Sbjct: 295 GYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQA---FEYLHGMKQRG 351
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+ P+ TY L A+ KA M K M + G+ PN+
Sbjct: 352 LQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNE 391
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 82/195 (42%)
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
N C+P F+ L + ++ Q F + + P + + N ++ K+ G
Sbjct: 175 NVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGL 234
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A F+ M +PS TY +I ++ AR +F+E+ G + T N++++
Sbjct: 235 ALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLID 294
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
Y G+ T A +FE + G PD TY L + K + L M+Q G+ P
Sbjct: 295 GYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQP 354
Query: 464 NKRFFLEALETFSSS 478
N + ++ F +
Sbjct: 355 NVVTYSTLIDAFCKA 369
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 165/357 (46%), Gaps = 7/357 (1%)
Query: 110 EHCFL--LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWL 167
E FL L L K + L ++F K+ Y+ LI + + T A L
Sbjct: 751 EDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDL 810
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
F +M+N GC PD +N L+ H K+ + + +++M RCKP+ +TYNI++
Sbjct: 811 FKDMKNVGCAPDAFTFNMLLAVH----GKSGKITELFELYKEMIS-RRCKPDAITYNIVI 865
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
+ A++ N+D+ F +L S P TY ++D K G ++E + M CK
Sbjct: 866 SSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCK 925
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P+ FN+LI+ YGK + Q+FK +++ +P L ++ ++ A +A Y
Sbjct: 926 PNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYY 985
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F ++ + P FI Y II G + A +++E+ G + T N+++ +
Sbjct: 986 FNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGL 1045
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G+ +A ++E G+ PD TY L + Y+ + E + K M +G PN
Sbjct: 1046 AGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPN 1102
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 155/338 (45%), Gaps = 6/338 (1%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ LEV+R M + YS L+ +GKK + + M L EM + G RP+ VY
Sbjct: 210 EALEVYRRMVSEGLK-PSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPN--VYTFT 266
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I + R A + +A F++M E C P++VTY +L+ A A ++ LF ++
Sbjct: 267 ICIRVLGR--AGKIDEAYEIFRRMDD-EGCGPDLVTYTVLIDALCNAGQLENAKELFVKM 323
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
+ PD Y ++D + G + + S+M+++ PD++TF +L+D K + F
Sbjct: 324 KANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDF 383
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
D+ F + P L T+N++I +A A + M ++ P+ TY
Sbjct: 384 DEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIF 443
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I +G +A E F+++ G + NA L + G EA +F G+
Sbjct: 444 IDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGL 503
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
PDS TY ++ K Y+K + LL M +NG P+
Sbjct: 504 APDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPD 541
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 142/289 (49%), Gaps = 6/289 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K+ + + F M+KQ + + Y+ LI + + G+ A+ L M +
Sbjct: 372 ILVDVLCKARDFDEAFATFDVMRKQ-GILPNLHTYNTLICGLLRAGRIEDALKLLGTMES 430
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G +P YN I K+ KA+ F+KMK + PNIV N L + A+
Sbjct: 431 VGVQPTAYTYNIFIDYF----GKSGETGKAVETFEKMKA-KGIVPNIVACNASLYSLAEM 485
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ + +F L E+ LAPD TYN +M Y K G + E ++LS M N C+PD+I
Sbjct: 486 GRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVV 545
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N LIDS K D+ Q+F + K PT+ T+N+++ GK KA +F+ M
Sbjct: 546 NSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIE 605
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
K +P+ I++ ++ + D V A ++F +++ + V T N ++
Sbjct: 606 KKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVI 654
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 177/399 (44%), Gaps = 16/399 (4%)
Query: 73 KSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVR-------SEHCFLLFEELGKSDKW 125
K+E S++ V +++S +D +R L+ + + +E C + E L DK
Sbjct: 82 KTEIRVSEDEVLGVLKSMTDP---IRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKV 138
Query: 126 LQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
VF +MQK + D Y + + +G R + ++MR +G + YN
Sbjct: 139 EDMAAVFEFMQK-KIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNG 197
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
LI H ++ +AL +++M E KP++ TY+ L+ A + R+ + V L KE
Sbjct: 198 LI----HLLIQSGFCGEALEVYRRMVS-EGLKPSLKTYSALMVALGKKRDSEMVMVLLKE 252
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ + L P++YT+ + G+ G I E + RM C PD++T+ +LID+
Sbjct: 253 MEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQ 312
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+ +++F + + KP + +++ + + + +M A Y P +T+
Sbjct: 313 LENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTI 372
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
++ + + A FD + K G + T N ++ G +A L ++G
Sbjct: 373 LVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVG 432
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
V P + TY + + K+ + ++M+ GIVPN
Sbjct: 433 VQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPN 471
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 175/402 (43%), Gaps = 30/402 (7%)
Query: 81 ELVRVLMRSFSDK--EPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQ 138
E+V VL++ D P V T ++V LG++ K + E+FR M +
Sbjct: 244 EMVMVLLKEMEDLGLRPNVYTFTICIRV------------LGRAGKIDEAYEIFRRMDDE 291
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT-----AHLHT 193
D Y+ LI + GQ A LF +M+ +G +PD +Y L+ L T
Sbjct: 292 GCG-PDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDT 350
Query: 194 RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP 253
+ + +A GY P++VT+ IL+ +AR+ D+ A F + + + P
Sbjct: 351 FKEFWSQMEADGYM----------PDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILP 400
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
+++TYN ++ + G I++ +L M+S +P T+N+ ID +GK K + F
Sbjct: 401 NLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETF 460
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
+ + P + N+ + + + +A+ +F + P +TY ++ Y
Sbjct: 461 EKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKV 520
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
V A + E+ + G + V +N+++++ G EA +F+ +M ++P TY
Sbjct: 521 GQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTY 580
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
L K + +L + M + PN F L+ F
Sbjct: 581 NTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCF 622
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 137/293 (46%), Gaps = 5/293 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++ L+AV GK G+ L+ EM + C+PD YN +I+ + K+ L KA
Sbjct: 822 DAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVIS----SLAKSNNLDKA 877
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L +F + + +P TY L+ A+ +++ LF+E+ + P+ +N +++
Sbjct: 878 LDFFYDLVSSDF-RPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILIN 936
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
YGK G + + RM + +PD+ ++ +L+D D+ F L + P
Sbjct: 937 GYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDP 996
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+N +I GK++ +A ++ +M P TY ++ G V +A+ ++
Sbjct: 997 DFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMY 1056
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+EL G + V T NA++ Y ++ P A +++N G P+ TY L
Sbjct: 1057 EELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 142/319 (44%), Gaps = 8/319 (2%)
Query: 129 LEVFR--WMQKQ-RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
L+ F+ W Q + Y+ D ++ L+ V+ K A F MR G P+ YN
Sbjct: 348 LDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNT 407
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
LI L AL K LG + + +P TYNI + ++ + F++
Sbjct: 408 LICGLLRAGRIEDAL-KLLGTMESVG----VQPTAYTYNIFIDYFGKSGETGKAVETFEK 462
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ + P+I N + + + G ++E +++ + ++ N PD +T+N+++ Y K
Sbjct: 463 MKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQ 522
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
D+ + ++ + +P + NS+I + KA +A +F +M MK +P+ +TY
Sbjct: 523 VDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNT 582
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+++ G V +A E+F+ + + + N +L+ +C N A +F M
Sbjct: 583 LLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMD 642
Query: 426 VTPDSSTYKLLYKAYTKAN 444
PD TY + K N
Sbjct: 643 CKPDVLTYNTVIYGLIKEN 661
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/398 (20%), Positives = 166/398 (41%), Gaps = 56/398 (14%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAV------MGKKGQTRLAMWL 167
+ + GKS + + +E F M+ + GI ++A + + G+ R A +
Sbjct: 442 IFIDYFGKSGETGKAVETFEKMKAK-------GIVPNIVACNASLYSLAEMGRLREAKTM 494
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
F+ +R +G PD YN ++ + K + +A+ +M C+P+++ N L+
Sbjct: 495 FNGLRENGLAPDSVTYNMMMKCY----SKVGQVDEAVNLLSEMI-RNGCEPDVIVVNSLI 549
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
+ +A VD+ +F + + L+P + TYN ++ GK G +++ + M +C
Sbjct: 550 DSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCS 609
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P+ I+FN L+D + K + ++F + KP + T+N++I K A +
Sbjct: 610 PNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWF 669
Query: 348 FQKMTAMKYTPSFITYECIITMYGYC----DNVSRAREIFDEL-----SKLGKDMKVSTL 398
F ++ + P +T ++ C D +S AR+ ++ +D+ TL
Sbjct: 670 FHQLKKSMH-PDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTL 728
Query: 399 ------NAML--EAYCMNGLPTEADLLF--------------------ENSHNMGVTPDS 430
A++ E +NG+ E L + + +G++P
Sbjct: 729 VEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTL 788
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
++Y L + + E L K M+ G P+ F
Sbjct: 789 ASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTF 826
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 164/392 (41%), Gaps = 54/392 (13%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L LGK + + +E+F M +++ +T ++ L+ K + LA+ +FS+M
Sbjct: 583 LLSGLGKEGRVQKAIELFESMIEKKCS-PNTISFNTLLDCFCKNDEVELALKMFSKMTVM 641
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA---CA 231
C+PD YN +I + K + A +F ++K + P+ VT LL C
Sbjct: 642 DCKPDVLTYNTVIYGLI----KENKVNHAFWFFHQLK--KSMHPDHVTICTLLPGLVKCG 695
Query: 232 Q-------ARNVD-----QVNALF-----------KELHESILAPDIYTYNGVMDAYGKN 268
Q AR+ +VN F E+ ++I+ + NG+ ++
Sbjct: 696 QIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICR---ED 752
Query: 269 GMIKEMESVLSRMKSN--------------QCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
+ + VL + K P + ++N LI + +K +FK
Sbjct: 753 SFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFK 812
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
+ + P TFN ++ +GK+ + ++++M + + P ITY +I+ +
Sbjct: 813 DMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSN 872
Query: 375 NVSRAREIFDELSKLGKDMKVS--TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
N+ +A + F +L + D + + T +++ G EA LFE + G P+ +
Sbjct: 873 NLDKALDFFYDL--VSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAI 930
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ +L Y K E +L KRM GI P+
Sbjct: 931 FNILINGYGKIGDTETACQLFKRMVNEGIRPD 962
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 129/310 (41%), Gaps = 11/310 (3%)
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
L DK + +A + QK K + R ++ TY + +A + + Q+ + ++ ++
Sbjct: 132 LRVHDKVEDMAAVFEFMQK-KIIRR---DLDTYLTIFKALSIRGGLRQMTTVLNKMRKAG 187
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
+ Y+YNG++ ++G E V RM S KP + T++ L+ + GK++ + +
Sbjct: 188 FVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVM 247
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+ K + +P + TF I G+A +A +F++M P +TY +I
Sbjct: 248 VLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDAL 307
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
+ A+E+F ++ G +L+ + G + G PD
Sbjct: 308 CNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDV 367
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTD 490
T+ +L KA + M + GI+PN L T+++ + G D
Sbjct: 368 VTFTILVDVLCKARDFDEAFATFDVMRKQGILPN-------LHTYNTLICGLLRAGRIED 420
Query: 491 LTRSLSTAKS 500
+ L T +S
Sbjct: 421 ALKLLGTMES 430
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 113/276 (40%), Gaps = 35/276 (12%)
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+AL YF + T N +L V+ + A+F+ + + I+ D+ TY +
Sbjct: 104 RALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTI 163
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
A G +++M +VL++M+ + ++N LI + + +V++ ++
Sbjct: 164 FKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGL 223
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
KP+L T++++++ GK R + ++M + P+ T+ I + G + A E
Sbjct: 224 KPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYE 283
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
IF + + G PD TY +L A
Sbjct: 284 IFRRMD-----------------------------------DEGCGPDLVTYTVLIDALC 308
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
A E ++L +M+ NG P++ ++ L+ F+
Sbjct: 309 NAGQLENAKELFVKMKANGHKPDQVIYITLLDKFND 344
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 163/375 (43%), Gaps = 54/375 (14%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + K G T A+ L M C+P+ V++ LI + K + + +A F
Sbjct: 178 YGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLC----KDRQVTEAFNIF 233
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M KG+ PNIVTYN L+ + V L E+ +S + PD++T N V+DA
Sbjct: 234 SEMITKGIS---PNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K GM+ E V+ M +P+++T+N L+D + R D +VF +++H +
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
++N++I Y K + KA Y+F++M+ + TP+ +TY +I + + A +F E
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410
Query: 386 LSKLGK-----------------------------------DMKVSTLNAMLEAYCMNGL 410
+ G+ D + +L+ C G
Sbjct: 411 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 470
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK----- 465
+A LF N + G+ P+ TY ++ K + KL M +NG PN
Sbjct: 471 LEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNL 530
Query: 466 --RFFL---EALETF 475
R FL EAL T
Sbjct: 531 ITRGFLRNNEALRTI 545
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 130/322 (40%), Gaps = 15/322 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT----AHLHTRDKA-KALAK 202
+++L+ + K + L +M + G PD VY I HL+ D A ALAK
Sbjct: 73 FNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPD--VYTLAIVINSLCHLNRVDFAFSALAK 130
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
L + P+ T+ L+R + + LF ++ P++ TY ++
Sbjct: 131 ILKLGHQ--------PDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLI 182
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+ K G +L M+ C+P+++ F+ LIDS K + + +F ++
Sbjct: 183 NGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGIS 242
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P + T+NS+I K + +M K P T ++ V+ A ++
Sbjct: 243 PNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDV 302
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
D + G + V T NA+++ +C+ A +F+ + + +Y L Y K
Sbjct: 303 VDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCK 362
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
+ L + M + + PN
Sbjct: 363 IQSVDKAMYLFEEMSRQELTPN 384
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 119/276 (43%), Gaps = 5/276 (1%)
Query: 135 MQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR 194
M R + Y+ L+ + + +A+ +F M + C + YN LI +
Sbjct: 305 MMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYC--- 361
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
K +++ KA+ F++M E PN VTYN L+ + +LF E+ PD
Sbjct: 362 -KIQSVDKAMYLFEEMSRQEL-TPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPD 419
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
+ TY + D KN + + ++L ++ + PDI + ++D + + +F
Sbjct: 420 LVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFS 479
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
+L +P + T+N MI K L +A +F +M +P+ TY I + +
Sbjct: 480 NLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNN 539
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
R E+ +E+ G + VST ++ +GL
Sbjct: 540 EALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGL 575
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 86/203 (42%), Gaps = 26/203 (12%)
Query: 100 LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG 159
+N Y K+ + LFEE+ + + +T Y+ LI + G
Sbjct: 357 INGYCKIQSVDKAMYLFEEMSRQE-----------------LTPNTVTYNTLIHGLCHVG 399
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALGYFQKMKGMERCK 217
+ + A+ LF EM G PD Y L R DKA AL KA+ +G
Sbjct: 400 RLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAI------EG-SNWD 452
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+I Y +L +A ++ LF L L P+++TYN ++ K G++ E +
Sbjct: 453 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 512
Query: 278 LSRMKSNQCKPDIITFNLLIDSY 300
S M N C P+ T+NL+ +
Sbjct: 513 FSEMNKNGCSPNDCTYNLITRGF 535
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 129/306 (42%), Gaps = 48/306 (15%)
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L +AL F +M ++ P+ V +N LL + A+ ++ + +L +++ + PD+YT
Sbjct: 51 LDEALSTFNRMLH-KQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLA 109
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY---GK----RQAFDKM--- 309
V+++ + S L+++ +PD TF LI GK FDKM
Sbjct: 110 IVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE 169
Query: 310 -------------------------EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
++ +S+ +P + F+++I + K R +A
Sbjct: 170 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEA 229
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYC------DNVSRAREIFDELSKLGKDMKVSTL 398
+F +M +P+ +TY +I +G C + E+ D SK+ D V TL
Sbjct: 230 FNIFSEMITKGISPNIVTYNSLI--HGLCKLCEWKHVTTLMNEMVD--SKIMPD--VFTL 283
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N +++A C G+ EA + + + GV P+ TY L + N ++ K+ M
Sbjct: 284 NTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH 343
Query: 459 NGIVPN 464
V N
Sbjct: 344 KDCVAN 349
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 63/165 (38%)
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
D+ F ++H + P+ FN ++ + K + + ++M + P T
Sbjct: 49 NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 108
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+I + + V A ++ KLG +T ++ C+ G EA LF+
Sbjct: 109 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 168
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G P+ TY L K +LL+ MEQ PN F
Sbjct: 169 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVF 213
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 75/166 (45%), Gaps = 6/166 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + L K+ + + + + ++ W D IY+ ++ M + G+ A LFS + +
Sbjct: 426 LSDYLCKNRHLDKAMALLKAIEGSNWD-PDIQIYTTILDGMCRAGELEDARDLFSNLSSK 484
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G +P+ YN +I H K LA+A F +M C PN TYN++ R +
Sbjct: 485 GLQPNVWTYNIMI----HGLCKQGLLAEASKLFSEMNK-NGCSPNDCTYNLITRGFLRNN 539
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSR 280
+ L +E+ + D+ T ++ +G+ + ++ +L +
Sbjct: 540 EALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCK 585
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 171/391 (43%), Gaps = 74/391 (18%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ L++ K G AM +F EMR +GC+P+ +NALI H R + A+
Sbjct: 392 DVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMH-GNRGR---FAEM 447
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH---------------- 247
+ F++++ + C P+IVT+N LL Q +V+ +FKE+
Sbjct: 448 MKVFEEIE-ICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLIS 506
Query: 248 -------------------ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
E+ + PD+ +YN V+ A + G+ ++ E V + MK +CKP
Sbjct: 507 AYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKP 566
Query: 289 DIITFNLLIDSYGKRQAFDKM----EQVFKSL---------------------------- 316
+ +T+ L+ +Y + ++M E+++ L
Sbjct: 567 NELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLMETEHAF 626
Query: 317 --MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
+ K P L T N+MI YG+ ++ KA + M ++PS TY ++ M+ +
Sbjct: 627 EELKKKGSPDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSE 686
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
N R+ E+ E+ G + + N ++ AYC NG +A +F G+ PD TY
Sbjct: 687 NFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVPDVITYN 746
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+Y ++ E +++ M ++G N+
Sbjct: 747 TFVASYAADSLFEDAIGVVRYMIKHGCKRNQ 777
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 174/390 (44%), Gaps = 12/390 (3%)
Query: 97 VRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMG 156
VR + V+ ++ LGK K + ++K + + D Y+ LI
Sbjct: 170 VREREDFESVLNCSVVAVIITMLGKEGKVSAASSILNNLRKDGFDL-DVYAYTSLITAYA 228
Query: 157 KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERC 216
G+ R A+ +F +M GC+P YN ++ + +K G MK
Sbjct: 229 SNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVY---GKMGMPWSKISGLVHGMKS-SGV 284
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
P+ TYN L+ C + ++ +F+E+ S +PD T+N ++D YGK+ KE
Sbjct: 285 APDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAME 344
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
VL M+ + P I+T+N LI +Y + + ++ ++ KP + T+ +++ +
Sbjct: 345 VLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFE 404
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
KA + A +F +M A P+ T+ +I M+G + ++F+E+ +
Sbjct: 405 KAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIV 464
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
T N +L + NG+ +E +F+ G P+ T+ L AY++ + + KRM
Sbjct: 465 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRM 524
Query: 457 EQNGIVPNKRFFLEALETFSSSLAGSQSGS 486
+ G+ P+ L ++++ LA G
Sbjct: 525 LEAGVTPD-------LSSYNAVLAALARGG 547
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 152/307 (49%), Gaps = 11/307 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI+ + A +F EM+ SG PD +N L+ + +R +A+
Sbjct: 287 DDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAM--- 343
Query: 204 LGYFQKMKGMERC--KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+ +K ME P+IVTYN L+ A A+ + + L ++ E + PD++TY +
Sbjct: 344 ----EVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTL 399
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ + K GM + + M++ CKP+I TFN LI +G R F +M +VF+ +
Sbjct: 400 LSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNC 459
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P + T+N+++ +G+ + + VF++M + P T+ +I+ Y C + +A
Sbjct: 460 APDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMA 519
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
++ + + G +S+ NA+L A GL +++ +F + P+ TY L AY
Sbjct: 520 VYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAY- 578
Query: 442 KANMKEL 448
AN KE+
Sbjct: 579 -ANSKEI 584
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 173/385 (44%), Gaps = 42/385 (10%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + GKS + + +EV + M+ + Y+ LI+ + G R AM L +M
Sbjct: 329 LLDVYGKSRRPKEAMEVLKEMEFS-GFSPSIVTYNSLISAYARDGLLREAMELKDQMVEK 387
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G +PD Y L++ +KA A+ F +M+ CKPNI T+N L++
Sbjct: 388 GIKPDVFTYTTLLSGF----EKAGMDEPAMRIFGEMRA-AGCKPNICTFNALIKMHGNRG 442
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
++ +F+E+ APDI T+N ++ +G+NGM E+ V MK P+ TFN
Sbjct: 443 RFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFN 502
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
LI +Y + +F + V+K ++ + P L ++N+++ + L ++E VF +M
Sbjct: 503 TLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDG 562
Query: 355 KYTPSFITYECIITMYG-----------------------------------YCDNVSRA 379
+ P+ +TY ++ Y CD +
Sbjct: 563 RCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLMET 622
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
F+EL K G +STLNAM+ Y + +A+ + + G +P +TY L
Sbjct: 623 EHAFEELKKKGSP-DLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYM 681
Query: 440 YTKANMKELVQKLLKRMEQNGIVPN 464
++++ E +++LK + G+ P+
Sbjct: 682 HSRSENFERSEEVLKEILAKGLKPD 706
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 157/336 (46%), Gaps = 14/336 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMW-----LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
Y+ ++ V GK G W L M++SG PD YN LI+ + +
Sbjct: 255 YNVILNVYGKMGMP----WSKISGLVHGMKSSGVAPDDYTYNTLISCC----RRGSLYEE 306
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A F++MK + P+ VT+N LL ++R + + KE+ S +P I TYN ++
Sbjct: 307 AAQVFEEMK-LSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLI 365
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
AY ++G+++E + +M KPD+ T+ L+ + K + ++F + + K
Sbjct: 366 SAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCK 425
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P + TFN++I +G + VF+++ P +T+ ++ ++G S +
Sbjct: 426 PNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGV 485
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
F E+ + G + T N ++ AY G +A +++ GVTPD S+Y + A +
Sbjct: 486 FKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALAR 545
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ E +K+ M+ PN+ + L +++S
Sbjct: 546 GGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANS 581
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 162/401 (40%), Gaps = 80/401 (19%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWY--IADTGIYSKLIAVMGKKGQTRLAMWLFSEMR 172
+ + LG K + VF W++++ + + + + + +I ++GK+G+ A + + +R
Sbjct: 150 IIKGLGFYKKCDMAMSVFSWVREREDFESVLNCSVVAVIITMLGKEGKVSAASSILNNLR 209
Query: 173 NSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
G D Y +LITA+ +
Sbjct: 210 KDGFDLDVYAYTSLITAY---------------------------------------ASN 230
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMI-KEMESVLSRMKSNQCKPDII 291
R D V +FK++ E P + TYN +++ YGK GM ++ ++ MKS+ PD
Sbjct: 231 GRYRDAV-LVFKKMEEEGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDY 289
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
T+N LI + +++ QVF+ + S P TFN+++ YGK+R +A V ++M
Sbjct: 290 TYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEM 349
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSR--------------------------------- 378
++PS +TY +I+ Y D + R
Sbjct: 350 EFSGFSPSIVTYNSLISAYAR-DGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGM 408
Query: 379 ---AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
A IF E+ G + T NA+++ + G E +FE PD T+
Sbjct: 409 DEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNT 468
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
L + + M V + K M++ G VP + F + +S
Sbjct: 469 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYS 509
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 165/357 (46%), Gaps = 7/357 (1%)
Query: 110 EHCFL--LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWL 167
E FL L L K + L ++F K+ Y+ LI + + T A L
Sbjct: 751 EDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDL 810
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
F +M+N GC PD +N L+ H K+ + + +++M RCKP+ +TYNI++
Sbjct: 811 FKDMKNVGCAPDAFTFNMLLAVH----GKSGKITELFELYKEMIS-RRCKPDAITYNIVI 865
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
+ A++ N+D+ F +L S P TY ++D K G ++E + M CK
Sbjct: 866 SSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCK 925
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P+ FN+LI+ YGK + Q+FK +++ +P L ++ ++ A +A Y
Sbjct: 926 PNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYY 985
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F ++ + P FI Y II G + A +++E+ G + T N+++ +
Sbjct: 986 FNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGL 1045
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G+ +A ++E G+ PD TY L + Y+ + E + K M +G PN
Sbjct: 1046 AGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPN 1102
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 155/338 (45%), Gaps = 6/338 (1%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ LEV+R M + YS L+ +GKK + + M L EM + G RP+ VY
Sbjct: 210 EALEVYRRMVSEGLK-PSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPN--VYTFT 266
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I + R A + +A F++M E C P++VTY +L+ A A ++ LF ++
Sbjct: 267 ICIRVLGR--AGKIDEAYEIFRRMDD-EGCGPDLVTYTVLIDALCNAGQLENAKELFVKM 323
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
+ PD Y ++D + G + + S+M+++ PD++TF +L+D K + F
Sbjct: 324 KANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDF 383
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
D+ F + P L T+N++I +A A + M ++ P+ TY
Sbjct: 384 DEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITF 443
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I +G +A E F+++ G + NA L + G EA +F G+
Sbjct: 444 IDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGL 503
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
PDS TY ++ K Y+K + LL M +NG P+
Sbjct: 504 APDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPD 541
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 141/289 (48%), Gaps = 6/289 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K+ + + F M+KQ + + Y+ LI + + G+ A+ L M +
Sbjct: 372 ILVDVLCKARDFDEAFATFDVMRKQ-GILPNLHTYNTLICGLLRAGRIEDALKLLDTMES 430
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G +P Y I K+ KA+ F+KMK + PNIV N L + A+
Sbjct: 431 VGVQPTAYTYITFIDYF----GKSGETGKAVETFEKMKA-KGIVPNIVACNASLYSLAEM 485
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ + +F L E+ LAPD TYN +M Y K G + E ++LS M N C+PD+I
Sbjct: 486 GRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVV 545
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N LIDS K D+ Q+F + K PT+ T+N+++ GK KA +F+ M
Sbjct: 546 NSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIX 605
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
K +P+ I++ ++ + D V A ++F +++ + V T N ++
Sbjct: 606 KKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVI 654
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 177/399 (44%), Gaps = 16/399 (4%)
Query: 73 KSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVR-------SEHCFLLFEELGKSDKW 125
K+E S++ V +++S +D +R L+ + + +E C + E L DK
Sbjct: 82 KTEIRVSEDEVLGVLKSMTDP---IRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKV 138
Query: 126 LQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
VF +MQK + D Y + + +G R + ++MR +G + YN
Sbjct: 139 EDMAAVFEFMQK-KIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNG 197
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
LI H ++ +AL +++M E KP++ TY+ L+ A + R+ + V L KE
Sbjct: 198 LI----HLLIQSGFCGEALEVYRRMVS-EGLKPSLKTYSALMVALGKKRDSEMVMVLLKE 252
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ + L P++YT+ + G+ G I E + RM C PD++T+ +LID+
Sbjct: 253 MEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQ 312
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+ +++F + + KP + +++ + + + +M A Y P +T+
Sbjct: 313 LENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTI 372
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
++ + + A FD + K G + T N ++ G +A L + ++G
Sbjct: 373 LVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVG 432
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
V P + TY + K+ + ++M+ GIVPN
Sbjct: 433 VQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPN 471
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 137/293 (46%), Gaps = 5/293 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++ L+AV GK G+ L+ EM + C+PD YN +I+ + K+ L KA
Sbjct: 822 DAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVIS----SLAKSNNLDKA 877
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L +F + + +P TY L+ A+ +++ LF+E+ + P+ +N +++
Sbjct: 878 LDFFYDLVSSDF-RPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILIN 936
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
YGK G + + RM + +PD+ ++ +L+D D+ F L + P
Sbjct: 937 GYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDP 996
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+N +I GK++ +A ++ +M P TY ++ G V +A+ ++
Sbjct: 997 DFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMY 1056
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+EL G + V T NA++ Y ++ P A +++N G P+ TY L
Sbjct: 1057 EELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 172/402 (42%), Gaps = 30/402 (7%)
Query: 81 ELVRVLMRSFSDK--EPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQ 138
E+V VL++ D P V T ++V LG++ K + E+FR M +
Sbjct: 244 EMVMVLLKEMEDLGLRPNVYTFTICIRV------------LGRAGKIDEAYEIFRRMDDE 291
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT-----AHLHT 193
D Y+ LI + GQ A LF +M+ +G +PD +Y L+ L T
Sbjct: 292 GCG-PDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDT 350
Query: 194 RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP 253
+ + +A GY P++VT+ IL+ +AR+ D+ A F + + + P
Sbjct: 351 FKEFWSQMEADGYM----------PDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILP 400
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
+++TYN ++ + G I++ +L M+S +P T+ ID +GK K + F
Sbjct: 401 NLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETF 460
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
+ + P + N+ + + + +A+ +F + P +TY ++ Y
Sbjct: 461 EKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKV 520
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
V A + E+ + G + V +N+++++ G EA +F+ +M ++P TY
Sbjct: 521 GQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTY 580
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
L K + +L + M PN F L+ F
Sbjct: 581 NTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCF 622
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 172/409 (42%), Gaps = 57/409 (13%)
Query: 104 VKVVRSEHCFLLF-EELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAV------MG 156
V V + + ++ F + GKS + + +E F M+ + GI ++A +
Sbjct: 431 VGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAK-------GIVPNIVACNASLYSLA 483
Query: 157 KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERC 216
+ G+ R A +F+ +R +G PD YN ++ + K + +A+ +M C
Sbjct: 484 EMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCY----SKVGQVDEAVNLLSEMI-RNGC 538
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+P+++ N L+ + +A VD+ +F + + L+P + TYN ++ GK G +++
Sbjct: 539 EPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIE 598
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+ M +C P+ I+FN L+D + K + ++F + KP + T+N++I
Sbjct: 599 LFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLI 658
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC----DNVSRAREIFDEL-----S 387
K A + F ++ + P +T ++ C D +S AR+ ++
Sbjct: 659 KENKVNHAFWFFHQLKKSMH-PDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNR 717
Query: 388 KLGKDMKVSTL------NAML--EAYCMNGLPTEADLLF--------------------E 419
+D+ TL A++ E +NG+ E L +
Sbjct: 718 SFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDK 777
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+ +G++P ++Y L + + E L K M+ G P+ F
Sbjct: 778 FTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTF 826
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 163/392 (41%), Gaps = 54/392 (13%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L LGK + + +E+F M ++ +T ++ L+ K + LA+ +FS+M
Sbjct: 583 LLSGLGKEGRVQKAIELFESMIXKKCS-PNTISFNTLLDCFCKNDEVELALKMFSKMTVM 641
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA---CA 231
C+PD YN +I + K + A +F ++K + P+ VT LL C
Sbjct: 642 DCKPDVLTYNTVIYGLI----KENKVNHAFWFFHQLK--KSMHPDHVTICTLLPGLVKCG 695
Query: 232 Q-------ARNVD-----QVNALF-----------KELHESILAPDIYTYNGVMDAYGKN 268
Q AR+ +VN F E+ ++I+ + NG+ ++
Sbjct: 696 QIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICR---ED 752
Query: 269 GMIKEMESVLSRMKSN--------------QCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
+ + VL + K P + ++N LI + +K +FK
Sbjct: 753 SFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFK 812
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
+ + P TFN ++ +GK+ + ++++M + + P ITY +I+ +
Sbjct: 813 DMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSN 872
Query: 375 NVSRAREIFDELSKLGKDMKVS--TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
N+ +A + F +L + D + + T +++ G EA LFE + G P+ +
Sbjct: 873 NLDKALDFFYDL--VSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAI 930
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ +L Y K E +L KRM GI P+
Sbjct: 931 FNILINGYGKIGDTETACQLFKRMVNEGIRPD 962
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 129/310 (41%), Gaps = 11/310 (3%)
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
L DK + +A + QK K + R ++ TY + +A + + Q+ + ++ ++
Sbjct: 132 LRVHDKVEDMAAVFEFMQK-KIIRR---DLDTYLTIFKALSIRGGLRQMTTVLNKMRKAG 187
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
+ Y+YNG++ ++G E V RM S KP + T++ L+ + GK++ + +
Sbjct: 188 FVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVM 247
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+ K + +P + TF I G+A +A +F++M P +TY +I
Sbjct: 248 VLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDAL 307
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
+ A+E+F ++ G +L+ + G + G PD
Sbjct: 308 CNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDV 367
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTD 490
T+ +L KA + M + GI+PN L T+++ + G D
Sbjct: 368 VTFTILVDVLCKARDFDEAFATFDVMRKQGILPN-------LHTYNTLICGLLRAGRIED 420
Query: 491 LTRSLSTAKS 500
+ L T +S
Sbjct: 421 ALKLLDTMES 430
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 113/276 (40%), Gaps = 35/276 (12%)
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+AL YF + T N +L V+ + A+F+ + + I+ D+ TY +
Sbjct: 104 RALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTI 163
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
A G +++M +VL++M+ + ++N LI + + +V++ ++
Sbjct: 164 FKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGL 223
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
KP+L T++++++ GK R + ++M + P+ T+ I + G + A E
Sbjct: 224 KPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYE 283
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
IF + + G PD TY +L A
Sbjct: 284 IFRRMD-----------------------------------DEGCGPDLVTYTVLIDALC 308
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
A E ++L +M+ NG P++ ++ L+ F+
Sbjct: 309 NAGQLENAKELFVKMKANGHKPDQVIYITLLDKFND 344
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 163/375 (43%), Gaps = 54/375 (14%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + K G T A+ L M C+P+ V++ LI + K + + +A F
Sbjct: 178 YGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLC----KDRQVTEAFNIF 233
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M KG+ PNIVTYN L+ + V L E+ +S + PD++T N V+DA
Sbjct: 234 SEMITKGI---SPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K GM+ E V+ M +P+++T+N L+D + R D +VF +++H +
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
++N++I Y K + KA Y+F++M+ + TP+ +TY +I + + A +F E
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410
Query: 386 LSKLGK-----------------------------------DMKVSTLNAMLEAYCMNGL 410
+ G+ D + +L+ C G
Sbjct: 411 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 470
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK----- 465
+A LF N + G+ P+ TY ++ K + KL M +NG PN
Sbjct: 471 LEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNL 530
Query: 466 --RFFL---EALETF 475
R FL EAL T
Sbjct: 531 ITRGFLRNNEALRTI 545
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 130/320 (40%), Gaps = 11/320 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA--HLHTRDKA-KALAKAL 204
+++L+ + K + L +M + G PD +I + HL+ D A ALAK L
Sbjct: 73 FNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKIL 132
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
+ P+ T+ L+R + + LF ++ P++ TY +++
Sbjct: 133 KLGHQ--------PDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLING 184
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
K G +L M+ C+P+++ F+ LIDS K + + +F ++ P
Sbjct: 185 LCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPN 244
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ T+NS+I K + +M K P T ++ V+ A ++ D
Sbjct: 245 IVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVD 304
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ G + V T NA+++ +C+ A +F+ + + +Y L Y K
Sbjct: 305 MMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQ 364
Query: 445 MKELVQKLLKRMEQNGIVPN 464
+ L + M + + PN
Sbjct: 365 SVDKAMYLFEEMSRQELTPN 384
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 119/276 (43%), Gaps = 5/276 (1%)
Query: 135 MQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR 194
M R + Y+ L+ + + +A+ +F M + C + YN LI +
Sbjct: 305 MMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYC--- 361
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
K +++ KA+ F++M E PN VTYN L+ + +LF E+ PD
Sbjct: 362 -KIQSVDKAMYLFEEMSRQE-LTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPD 419
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
+ TY + D KN + + ++L ++ + PDI + ++D + + +F
Sbjct: 420 LVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFS 479
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
+L +P + T+N MI K L +A +F +M +P+ TY I + +
Sbjct: 480 NLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNN 539
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
R E+ +E+ G + VST ++ +GL
Sbjct: 540 EALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGL 575
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 86/203 (42%), Gaps = 26/203 (12%)
Query: 100 LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG 159
+N Y K+ + LFEE+ + + +T Y+ LI + G
Sbjct: 357 INGYCKIQSVDKAMYLFEEMSRQE-----------------LTPNTVTYNTLIHGLCHVG 399
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALGYFQKMKGMERCK 217
+ + A+ LF EM G PD Y L R DKA AL KA+ +G
Sbjct: 400 RLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAI------EG-SNWD 452
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+I Y +L +A ++ LF L L P+++TYN ++ K G++ E +
Sbjct: 453 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 512
Query: 278 LSRMKSNQCKPDIITFNLLIDSY 300
S M N C P+ T+NL+ +
Sbjct: 513 FSEMNKNGCSPNDCTYNLITRGF 535
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 129/306 (42%), Gaps = 48/306 (15%)
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L +AL F +M ++ P+ V +N LL + A+ ++ + +L +++ + PD+YT
Sbjct: 51 LDEALSTFNRMLH-KQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLA 109
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY---GK----RQAFDKM--- 309
V+++ + S L+++ +PD TF LI GK FDKM
Sbjct: 110 IVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE 169
Query: 310 -------------------------EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
++ +S+ +P + F+++I + K R +A
Sbjct: 170 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEA 229
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYC------DNVSRAREIFDELSKLGKDMKVSTL 398
+F +M +P+ +TY +I +G C + E+ D SK+ D V TL
Sbjct: 230 FNIFSEMITKGISPNIVTYNSLI--HGLCKLCEWKHVTTLMNEMVD--SKIMPD--VFTL 283
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N +++A C G+ EA + + + GV P+ TY L + N ++ K+ M
Sbjct: 284 NTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH 343
Query: 459 NGIVPN 464
V N
Sbjct: 344 KDCVAN 349
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 63/165 (38%)
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
D+ F ++H + P+ FN ++ + K + + ++M + P T
Sbjct: 49 NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 108
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+I + + V A ++ KLG +T ++ C+ G EA LF+
Sbjct: 109 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 168
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G P+ TY L K +LL+ MEQ PN F
Sbjct: 169 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVF 213
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 76/167 (45%), Gaps = 6/167 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + L K+ + + + + ++ W D IY+ ++ M + G+ A LFS + +
Sbjct: 426 LSDYLCKNRHLDKAMALLKAIEGSNWD-PDIQIYTTILDGMCRAGELEDARDLFSNLSSK 484
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G +P+ YN +I H K LA+A F +M C PN TYN++ R +
Sbjct: 485 GLQPNVWTYNIMI----HGLCKQGLLAEASKLFSEMNK-NGCSPNDCTYNLITRGFLRNN 539
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
+ L +E+ + D+ T ++ +G+ + ++ +L ++
Sbjct: 540 EALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKI 586
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 150/305 (49%), Gaps = 7/305 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI+ + + A +F EMR +G PD +N+L+ + KA+ +A
Sbjct: 248 DRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVY----GKARMHDEA 303
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+G ++M+ + C P++VTYN L+ + + + + L +E+ + PD+ TY ++
Sbjct: 304 IGVLKEME-LGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLIS 362
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ G I M N CKP++ T+N LI +G R F +M VF L + P
Sbjct: 363 GLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVP 422
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T+N+++ +G+ L + VF++M Y P TY +I+ Y C ++ EI+
Sbjct: 423 DVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIY 482
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ + G +ST NA+L A G +A+ LF N+ PD +Y L AY A
Sbjct: 483 KRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAY--A 540
Query: 444 NMKEL 448
N K+L
Sbjct: 541 NAKKL 545
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 145/300 (48%), Gaps = 6/300 (2%)
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ-ARNV 236
PD S Y AL++A +A A+ F++M +P IVTYN++L ++ A
Sbjct: 176 PDASAYTALVSAF----SRASRFRDAVAVFRRMVA-NGIQPAIVTYNVVLHVYSKIAVPW 230
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
V AL + + D YTYN ++ + + KE V M++ +PD +TFN L
Sbjct: 231 KDVVALVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSL 290
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
+D YGK + D+ V K + P++ T+NS+I +Y K L +A + ++M
Sbjct: 291 LDVYGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGI 350
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
P ITY +I+ + A +DE+ + G + T NA+++ + + G E
Sbjct: 351 QPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMA 410
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+F++ + G PD T+ L + + + V + K M+++G VP + ++ + ++S
Sbjct: 411 VFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYS 470
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 145/321 (45%), Gaps = 4/321 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ L++ + + R A+ +F M +G +P YN ++ H++++ A
Sbjct: 177 DASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVL--HVYSK-IAVPWKDV 233
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ MK + + TYN L+ C + + +F E+ + PD T+N ++D
Sbjct: 234 VALVDSMKN-DGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLD 292
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
YGK M E VL M+ C P ++T+N LI SY K + ++ + + +P
Sbjct: 293 VYGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQP 352
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T+ ++I +A A + +M P+ TY +I ++G +F
Sbjct: 353 DVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVF 412
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
D+L G V T N +L + NGL +E +F+ G P+ TY L +Y++
Sbjct: 413 DDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRC 472
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+ + ++ KRM + GI P+
Sbjct: 473 GLFDQSMEIYKRMIEAGIYPD 493
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 160/402 (39%), Gaps = 75/402 (18%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI+ + + G+ A+ + EM +GC+P+ YNALI H R K +
Sbjct: 353 DVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLH-GVRGK---FPEM 408
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH---------------- 247
+ F ++ P++VT+N LL Q +V+ +FKE+
Sbjct: 409 MAVFDDLRSAGFV-PDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLIS 467
Query: 248 -------------------ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
E+ + PDI TYN V+ A + G ++ E + + M++ C+P
Sbjct: 468 SYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRP 527
Query: 289 DIITFNLLIDSYGKRQAFDKM-----------------------------------EQVF 313
D ++++ L+ +Y + DKM E+ F
Sbjct: 528 DELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAF 587
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
L + + N+M+ YGK R+ K E + M S TY ++ MY
Sbjct: 588 LELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRL 647
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ + I E+ G + N M+ AY G EA LF + G+ PD TY
Sbjct: 648 GDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTY 707
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ K+Y +M E L++ M G PN+R + L+ +
Sbjct: 708 NIFVKSYVANSMFEEAIDLVRYMVTRGCKPNERTYNSILQEY 749
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 155/353 (43%), Gaps = 40/353 (11%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI+ K G + A L EM G +PD Y LI+ D+A + A+G +
Sbjct: 322 YNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISG----LDRAGKIDAAIGTY 377
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M CKPN+ TYN L++ ++ A+F +L + PD+ T+N ++ +G+
Sbjct: 378 DEML-RNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQ 436
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
NG+ E+ V MK + P+ T+ LI SY + FD+ +++K ++ + P + T
Sbjct: 437 NGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDIST 496
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC-------------- 373
+N+++ + +AE +F +M + P ++Y ++ Y
Sbjct: 497 YNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIY 556
Query: 374 ---------------------DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+N+S + F EL + + ++ LNAM+ Y N +
Sbjct: 557 AEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVK 616
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+ + + + ++TY L Y++ E + +L ++ +G P++
Sbjct: 617 KVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDR 669
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 144/316 (45%), Gaps = 14/316 (4%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VF+ M+K Y+ + Y LI+ + G +M ++ M +G PD S YNA+++A
Sbjct: 446 VFKEMKKS-GYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSAL 504
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
+ +A F +M+ ++ C+P+ ++Y+ LL A A A+ +D++ AL E I
Sbjct: 505 A----RGGRWEQAEKLFAEMENLD-CRPDELSYSSLLHAYANAKKLDKMKAL----SEDI 555
Query: 251 LAPDIYTYNGVMDAY----GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
A I +++G++ K + E E + +C DI N ++ YGK +
Sbjct: 556 YAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMV 615
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
K+E++ + S + T+NS++ Y + K E + ++ + P +Y +
Sbjct: 616 KKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTM 675
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I YG + A +F E+ G + T N +++Y N + EA L G
Sbjct: 676 IYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTRGC 735
Query: 427 TPDSSTYKLLYKAYTK 442
P+ TY + + Y +
Sbjct: 736 KPNERTYNSILQEYCR 751
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 135/294 (45%), Gaps = 33/294 (11%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
Q +E+++ M + Y D Y+ +++ + + G+ A LF+EM N CRPD Y++L
Sbjct: 477 QSMEIYKRMIEAGIY-PDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSL 535
Query: 187 ITAHLHTR--DKAKALAKALGYFQKMK-----------------------------GMER 215
+ A+ + + DK KAL++ + Y +K++ G R
Sbjct: 536 LHAYANAKKLDKMKALSEDI-YAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRR 594
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
C +I N ++ + R V +V + + S + TYN +M Y + G ++ E
Sbjct: 595 CSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCE 654
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
++L+ +KS+ +PD ++N +I +YG++ + ++F + S P + T+N + +Y
Sbjct: 655 NILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSY 714
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
+ +A + + M P+ TY I+ Y ++ A+ L +L
Sbjct: 715 VANSMFEEAIDLVRYMVTRGCKPNERTYNSILQEYCRHGKIADAKSFLSNLPQL 768
>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
Length = 597
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 156/321 (48%), Gaps = 9/321 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ GQ A + SEM+ +G P +VYNA + L KA+ KA+ +
Sbjct: 210 YALLLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLL----KARCSEKAVEVY 265
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
Q+MK ERC+ N TY +++ +A +F+E+ P+I TY +++A+ +
Sbjct: 266 QRMK-KERCRTNTETYTLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAR 324
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G+ ++ E V M+ +PD+ +N L+++Y + ++F + H +P +
Sbjct: 325 EGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRAS 384
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N ++ +G+A L +AE FQ++ P+ ++ +++ + NV+R E+ +L
Sbjct: 385 YNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLH 444
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLF----ENSHNMGVTPDSSTYKLLYKAYTKA 443
K G LNAML AY G + + LF + PD+STY ++ AY +A
Sbjct: 445 KSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGAIAGAPDTSTYNVMVNAYGRA 504
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+ ++ + + G+ +
Sbjct: 505 GYLDRMEAAFRSLAARGLAAD 525
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 125/247 (50%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+P+I+ YN+L+ A Q R + + A + L E+ P TY ++ AY +G + E
Sbjct: 169 RPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEG 228
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
V+S M+ N P +N +D K + +K +V++ + + + T+ MI YG
Sbjct: 229 VISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYG 288
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
KA + VF++M ++ P+ TY ++ + +A E+F+E+ + G + V
Sbjct: 289 KANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVY 348
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
NA++EAY GLP A +F +MG PD ++Y +L A+ +A + + + + +
Sbjct: 349 AYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQEL 408
Query: 457 EQNGIVP 463
+Q G+ P
Sbjct: 409 KQQGMRP 415
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 142/302 (47%), Gaps = 6/302 (1%)
Query: 171 MRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRAC 230
+R S RPD YN LI A+ R ++A A + + RC P TY +LLRA
Sbjct: 163 LRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMALLEA-----RCVPTEDTYALLLRAY 217
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
+ + + + E+ + + P YN +D K ++ V RMK +C+ +
Sbjct: 218 CGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNT 277
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
T+ L+I+ YGK +VF+ + KP + T+ +++ + + L KAE VF++
Sbjct: 278 ETYTLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEE 337
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M + P Y ++ Y A EIF + +G + ++ N +++A+ GL
Sbjct: 338 MQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGL 397
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
EA+ F+ G+ P ++ LL A+ ++ ++++ ++ ++G+ P+ F L
Sbjct: 398 HQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDT-FALN 456
Query: 471 AL 472
A+
Sbjct: 457 AM 458
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 135/271 (49%), Gaps = 17/271 (6%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
EVF MQ Q + D Y+ L+ + G + A +FS M + GC PD + YN L+ A
Sbjct: 333 EVFEEMQ-QAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDA 391
Query: 190 HLHTRDKAKALAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
+A +A FQ++K GM +P + ++ +LL A A++ NV + + +LH
Sbjct: 392 F----GRAGLHQEAEAAFQELKQQGM---RPTMKSHMLLLSAHARSGNVARCEEVMAQLH 444
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK----PDIITFNLLIDSYGKR 303
+S L PD + N +++AYG+ G + +ME + + M+ PD T+N+++++YG+
Sbjct: 445 KSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGAIAGAPDTSTYNVMVNAYGRA 504
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
D+ME F+SL + T+ S I Y + + G+ VF++M P T
Sbjct: 505 GYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTA 564
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
+ ++ C + + ++ + + KD K
Sbjct: 565 KVLLAA---CSDERQVEQVKAIVRSMHKDAK 592
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 173/357 (48%), Gaps = 12/357 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L K K+ Q +E F + Y+ +I + K G+T A LF +M +
Sbjct: 171 LINGLCKVGKFAQAVEFFDDFEASGCQ-PTVYTYTTIINGLCKIGETTAAAGLFKKMEEA 229
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC+P+ YN LI + K K + +AL F MK +R P+I TYN L++ R
Sbjct: 230 GCQPNVVTYNILIDSLC----KDKLVNEALDIFSYMKA-KRISPDIFTYNSLIQGLCNFR 284
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ +AL E+ + P+I+T+N ++DA K G + E + V M +PD++T++
Sbjct: 285 RWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYS 344
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
L+ Y R + ++F +++ KP ++N +I Y KA+ +A+ +F +M
Sbjct: 345 SLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQ 404
Query: 355 KYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
TP + Y +I +G C + A+++F + G + T + +L+ +C G
Sbjct: 405 GLTPDNVNYNTLI--HGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLG 462
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTK-ANMKELVQKLLKRMEQNGIVPNKRFF 468
+A LF + + PD + Y +L A K N+K+ +KL + G++PN + +
Sbjct: 463 KAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKD-ARKLFSELFVQGLLPNVQIY 518
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 149/321 (46%), Gaps = 5/321 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++ LI + K G+ A+ F + SGC+P Y +I K A
Sbjct: 164 DAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLC----KIGETTAA 219
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
G F+KM+ C+PN+VTYNIL+ + + + V++ +F + ++PDI+TYN ++
Sbjct: 220 AGLFKKMEE-AGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQ 278
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
KE ++L+ M S P+I TFN+L+D+ K + + VFK++ +P
Sbjct: 279 GLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEP 338
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T++S++ Y +A +F M P +Y +I Y + A+++F
Sbjct: 339 DVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLF 398
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+E+ G N ++ C G EA LF+N H+ G PD TY +L + K
Sbjct: 399 NEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKE 458
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+L + M+ + P+
Sbjct: 459 GYLGKAFRLFRVMQSTYLKPD 479
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 143/323 (44%), Gaps = 9/323 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D S LI + LA +FS+M G +PD +N LI K A+A
Sbjct: 129 DIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLC----KVGKFAQA 184
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ +F + C+P + TY ++ + LFK++ E+ P++ TYN ++D
Sbjct: 185 VEFFDDFEA-SGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILID 243
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ K+ ++ E + S MK+ + PDI T+N LI + + + + + P
Sbjct: 244 SLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMP 303
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRARE 381
+ TFN ++ K +A+ VF+ MT M P +TY + MYGY + AR+
Sbjct: 304 NIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSL--MYGYSLRMEIVEARK 361
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+FD + G + N +++ YC EA LF + G+TPD+ Y L
Sbjct: 362 LFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLC 421
Query: 442 KANMKELVQKLLKRMEQNGIVPN 464
+ Q L K M NG +P+
Sbjct: 422 QLGRLREAQDLFKNMHSNGNLPD 444
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 152/349 (43%), Gaps = 6/349 (1%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K + L++F +M+ +R D Y+ LI + + + A L +EM +
Sbjct: 240 ILIDSLCKDKLVNEALDIFSYMKAKRIS-PDIFTYNSLIQGLCNFRRWKEASALLNEMTS 298
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
P+ +N L+ A K +++A G F+ M M +P++VTY+ L+ +
Sbjct: 299 LNIMPNIFTFNVLVDAIC----KEGKVSEAQGVFKTMTEM-GVEPDVVTYSSLMYGYSLR 353
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ + LF + PD ++YN ++ Y K I E + + + M PD + +
Sbjct: 354 MEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNY 413
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N LI + + + +FK++ + P L T++ ++ + K GKA +F+ M +
Sbjct: 414 NTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQS 473
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P Y +I N+ AR++F EL G V ++ C GL E
Sbjct: 474 TYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDE 533
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
A F N G PD +Y ++ + + + + +L+ M G V
Sbjct: 534 ALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFV 582
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 133/315 (42%), Gaps = 46/315 (14%)
Query: 192 HTRDKA---KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ-ARNVDQVNALFKELH 247
H D A + + AL F M E P I+ + LL A + + V +L K++
Sbjct: 64 HKHDDASSFRNIDDALASFNHMLHREPL-PCIIQFTKLLSAIVKMGQYYGAVISLSKQME 122
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK----- 302
+ L+PDIYT + ++D + + SV S+M +PD +TFN LI+ K
Sbjct: 123 LAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFA 182
Query: 303 --RQAFDKMEQ----------------------------VFKSLMHSKEKPTLPTFNSMI 332
+ FD E +FK + + +P + T+N +I
Sbjct: 183 QAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILI 242
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE---IFDELSKL 389
+ K +L +A +F M A + +P TY +I G C N R +E + +E++ L
Sbjct: 243 DSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQ--GLC-NFRRWKEASALLNEMTSL 299
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
+ T N +++A C G +EA +F+ MGV PD TY L Y+
Sbjct: 300 NIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEA 359
Query: 450 QKLLKRMEQNGIVPN 464
+KL M G P+
Sbjct: 360 RKLFDAMITKGCKPD 374
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 154/326 (47%), Gaps = 12/326 (3%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
W + +E+ M K+ D Y+ LI+ ++ + A +F EM+ SG PD +N
Sbjct: 206 WKEVVELVASM-KEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFN 264
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMER--CKPNIVTYNILLRACAQARNVDQVNAL 242
+L+ + R +A+ + ++ MER C P++VTYN L+ + + ++Q AL
Sbjct: 265 SLLDVYGKARRHDEAI-------EVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVAL 317
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
+E+ + PD+ TY ++ + G I M N CKP++ T+N LI +G
Sbjct: 318 KQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGV 377
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
R F +M VF + P + T+N+++ +G+ L + VF++M Y P T
Sbjct: 378 RGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDT 437
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y +I+ Y C A +I+ + + G VST NA+L A G +A+ LF
Sbjct: 438 YVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEME 497
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKEL 448
PD +Y L AY AN K L
Sbjct: 498 ERDCKPDEYSYSSLLHAY--ANAKRL 521
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 142/321 (44%), Gaps = 4/321 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D G Y+ L++ + G+ R A+ +F M +SG +P YN + LH K K
Sbjct: 153 DAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVV----LHVYSKMAVPWKE 208
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ P+ TYN L+ C + + +F E+ S PD T+N ++D
Sbjct: 209 VVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLD 268
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
YGK E V+ M+ C P ++T+N LI SY K ++ + + + KP
Sbjct: 269 VYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKP 328
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T+ ++I +A A + +M P+ TY +I M+G +F
Sbjct: 329 DVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVF 388
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
DE G + T N +L + NGL +E +F+ G P+ TY L +Y++
Sbjct: 389 DEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRC 448
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+ +L ++ KRM + GI P+
Sbjct: 449 GLFDLAMQIYKRMMEAGIYPD 469
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 160/331 (48%), Gaps = 10/331 (3%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+ + I VM + G+ A S + ++ PD Y AL++A +A A+
Sbjct: 125 VLATAIRVMARAGRLAEA----SALLDAAPGPDAGAYTALVSAF----SRAGRFRDAVAV 176
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQ-ARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
F++M +P IVTYN++L ++ A +V L + E +APD YTYN ++
Sbjct: 177 FRRMVD-SGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCC 235
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ + KE V MK++ +PD +TFN L+D YGK + D+ +V + + P++
Sbjct: 236 RRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSV 295
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+NS+I +Y K L +A + Q+M P +TY +I+ + A +DE
Sbjct: 296 VTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDE 355
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ + G + T NA+++ + + G E +F+ + G PD T+ L + + +
Sbjct: 356 MVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGL 415
Query: 446 KELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
V + K M++ G +P + ++ + ++S
Sbjct: 416 DSEVSGVFKEMKKAGYIPERDTYVSLISSYS 446
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 157/402 (39%), Gaps = 75/402 (18%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI+ + + G+ A+ + EM +GC+P+ YNALI H R K +
Sbjct: 329 DVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMH-GVRGKFPEMMAV 387
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH---------------- 247
F+ + P+IVT+N LL Q +V+ +FKE+
Sbjct: 388 FDEFRSAGFV----PDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLIS 443
Query: 248 -------------------ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
E+ + PD+ TYN V+ A + G ++ E + + M+ CKP
Sbjct: 444 SYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKP 503
Query: 289 DIITFNLLIDSYGKRQAFDKM-----------------------------------EQVF 313
D +++ L+ +Y + DKM E+ F
Sbjct: 504 DEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAF 563
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
L + + N+M+ YGK R+ K E + M S TY ++ MY
Sbjct: 564 LELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRL 623
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ + I E+ G + N ++ AY G EA LF G+ PD TY
Sbjct: 624 GDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTY 683
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ K+Y +M E +L++ M G PN+R + +E +
Sbjct: 684 NIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGY 725
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 138/295 (46%), Gaps = 10/295 (3%)
Query: 128 CLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
+++++ M + Y D Y+ +++ + + G+ A LF+EM C+PD Y++L+
Sbjct: 454 AMQIYKRMMEAGIY-PDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLL 512
Query: 188 TAHLHTR--DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
A+ + + DK KAL+ + ER +P+ L+ ++ N+ + F E
Sbjct: 513 HAYANAKRLDKMKALSDDIY-------SERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLE 565
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
L + + DI N ++ YGKN M++++E +LS MK + T+N L+ Y +
Sbjct: 566 LRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGD 625
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+K E + + S +P ++N++I YG+ +A +F +M P +TY
Sbjct: 626 CEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNI 685
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
+ Y A E+ + G T N+++E YC NG T+A + N
Sbjct: 686 FVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSN 740
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + + G + +E+++SG RPD YN +I A+ + + +A F
Sbjct: 613 YNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAY----GRKGQMKEASRLF 668
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+MK KP++VTYNI +++ ++ L + + P+ TYN +++ Y +
Sbjct: 669 SEMK-CSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCR 727
Query: 268 NGMIKEMESVLSRM 281
NG + + + +S +
Sbjct: 728 NGKLTDAKIFVSNL 741
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 155/322 (48%), Gaps = 5/322 (1%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
++S LI K+G+ AM +FS+MR G PD Y +I K+ + A+ Y
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILC----KSGRVEDAMRY 431
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F++M ER P + YN L+ + D+ L E+ + + D +N ++D++
Sbjct: 432 FEQMID-ERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHC 490
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K G + E E + M KP+IIT++ LID Y D+ ++ S++ KP
Sbjct: 491 KEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 550
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T+N++I Y K A +F++M + +P ITY I+ + A+E++ +
Sbjct: 551 TYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 610
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
++ G +++ST N +L C N L EA +F+N + ++ T+ ++ A K
Sbjct: 611 TESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRN 670
Query: 447 ELVQKLLKRMEQNGIVPNKRFF 468
+ + L + NG+VP+ R +
Sbjct: 671 DEAKDLFAALSANGLVPDVRTY 692
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 150/328 (45%), Gaps = 7/328 (2%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
R + + Y+ +IA + K AM + + M +G P+ YN+++ H +
Sbjct: 227 DRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIV----HGYCSS 282
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+A+G+ +KM + +P++VTYN L+ + + +F + + L P+I T
Sbjct: 283 GQPKEAIGFLKKMHS-DGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITT 341
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y ++ Y G + EM +L M N P+ F++LI +Y K+ D+ VF +
Sbjct: 342 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMR 401
Query: 318 HSKEKPTLPTFNSMI-INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
P T+ ++I I R++ Y F++M + +P I Y +I D
Sbjct: 402 QQGLNPDTVTYGTVIGILCKSGRVEDAMRY-FEQMIDERLSPGNIVYNSLIHSLCIFDKW 460
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A+E+ E+ G + N++++++C G E++ LF+ +GV P+ TY L
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTL 520
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y A + KLL M G+ P+
Sbjct: 521 IDGYCLAGKMDEATKLLASMVSVGMKPD 548
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 134/319 (42%), Gaps = 6/319 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI G+ L + G R D + L+ + + A+ L
Sbjct: 94 YGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 153
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE--SILAPDIYTYNGVMDAY 265
++ C PN+ +YNILL+ + L + + + PD+ +Y V++ +
Sbjct: 154 TQLG----CIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGF 209
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G + + M P+++T+N +I + K QA DK +V S++ + P
Sbjct: 210 FKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNC 269
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+NS++ Y + +A +KM + P +TY ++ + AR++FD
Sbjct: 270 RTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDS 329
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
++K G +++T +L+ Y G E L + G+ P+ + +L AY K
Sbjct: 330 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGK 389
Query: 446 KELVQKLLKRMEQNGIVPN 464
+ + +M Q G+ P+
Sbjct: 390 VDQAMLVFSKMRQQGLNPD 408
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 125/259 (48%), Gaps = 11/259 (4%)
Query: 217 KPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
+ + + + LL+ CA R D ++ + + + + P++++YN ++ +E
Sbjct: 123 RVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEAL 182
Query: 276 SVLSRMKSN--QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
+L M + C PD++++ +I+ + K DK + ++ P + T+NS+I
Sbjct: 183 ELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIA 242
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL---G 390
KA+ KA V M P+ TY I+ +GYC + + +E L K+ G
Sbjct: 243 ALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIV--HGYCSS-GQPKEAIGFLKKMHSDG 299
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY-TKANMKELV 449
+ V T N++++ C NG TEA +F++ G+ P+ +TY L + Y TK + E+
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEM- 358
Query: 450 QKLLKRMEQNGIVPNKRFF 468
LL M +NGI PN F
Sbjct: 359 HGLLDLMVRNGIHPNHYVF 377
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 135/311 (43%), Gaps = 13/311 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ L+ + K G+ A +F M G +P+ + Y L+ + AL +
Sbjct: 303 DVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYA----TKGALVEM 358
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
G M G+ PN ++IL+ A A+ VDQ +F ++ + L PD TY V
Sbjct: 359 HGLLDLMVRNGIH---PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTV 415
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ K+G +++ +M + P I +N LI S +DK +++ ++
Sbjct: 416 IGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
FNS+I ++ K ++E +F M + P+ ITY +I Y + A +
Sbjct: 476 CLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATK 535
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL----LY 437
+ + +G T N ++ YC +A +LF + GV+PD TY + L+
Sbjct: 536 LLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLF 595
Query: 438 KAYTKANMKEL 448
+ A KEL
Sbjct: 596 QTRRTAAAKEL 606
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 13/191 (6%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS LI G+ A L + M + G +PD YN LI + K + AL F
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYC----KISRMEDALVLF 572
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M+ P+I+TYNI+L+ Q R L+ + ES ++ TYN ++ K
Sbjct: 573 REMES-SGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCK 631
Query: 268 NGMIKEMESVLSRMKSNQCKPDII----TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
N + E RM N C D+ TFN++I + K D+ + +F +L + P
Sbjct: 632 NNLTDEA----LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVP 687
Query: 324 TLPTFNSMIIN 334
+ T++ M N
Sbjct: 688 DVRTYSLMAEN 698
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 89/210 (42%), Gaps = 15/210 (7%)
Query: 278 LSRMKSNQCKPDIITFNLLIDS---YGKRQ-AFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
++R +++ P++ T+ +LI S G+ F + V K P +
Sbjct: 79 MARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCA 138
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
+ R + V ++MT + P+ +Y I + G CD +R++E + L + D
Sbjct: 139 D---KRTSDAMDIVLRRMTQLGCIPNVFSYN--ILLKGLCDE-NRSQEALELLQMMPDDG 192
Query: 394 KVSTLNAMLEAYCMNGLPTEADL--LFENSHNM---GVTPDSSTYKLLYKAYTKANMKEL 448
+ + +NG E DL + H M G+ P+ TY + A KA +
Sbjct: 193 GDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDK 252
Query: 449 VQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
++L M +NG++PN R + + + SS
Sbjct: 253 AMEVLTSMVKNGVMPNCRTYNSIVHGYCSS 282
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 22/187 (11%)
Query: 100 LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG 159
+N Y K+ R E +LF E+ S D Y+ ++ + +
Sbjct: 556 INGYCKISRMEDALVLFREMESS-----------------GVSPDIITYNIILQGLFQTR 598
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
+T A L+ + SG + + S YN + LH K +AL FQ + + +
Sbjct: 599 RTAAAKELYVGITESGTQLELSTYNII----LHGLCKNNLTDEALRMFQNLC-LTDLQLE 653
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
T+NI++ A + D+ LF L + L PD+ TY+ + + + G+++E++ +
Sbjct: 654 TRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFL 713
Query: 280 RMKSNQC 286
M+ N C
Sbjct: 714 SMEENGC 720
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 154/326 (47%), Gaps = 12/326 (3%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
W + +E+ M K+ D Y+ LI+ ++ + A +F EM+ SG PD +N
Sbjct: 224 WKEVVELVASM-KEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFN 282
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMER--CKPNIVTYNILLRACAQARNVDQVNAL 242
+L+ + R +A+ + ++ MER C P++VTYN L+ + + ++Q AL
Sbjct: 283 SLLDVYGKARRHDEAI-------EVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVAL 335
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
+E+ + PD+ TY ++ + G I M N CKP++ T+N LI +G
Sbjct: 336 KQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGV 395
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
R F +M VF + P + T+N+++ +G+ L + VF++M Y P T
Sbjct: 396 RGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDT 455
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y +I+ Y C A +I+ + + G VST NA+L A G +A+ LF
Sbjct: 456 YVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEME 515
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKEL 448
PD +Y L AY AN K L
Sbjct: 516 ERDCKPDEYSYSSLLHAY--ANAKRL 539
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 142/321 (44%), Gaps = 4/321 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D G Y+ L++ + G+ R A+ +F M +SG +P YN + LH K K
Sbjct: 171 DAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVV----LHVYSKMAVPWKE 226
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ P+ TYN L+ C + + +F E+ S PD T+N ++D
Sbjct: 227 VVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLD 286
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
YGK E V+ M+ C P ++T+N LI SY K ++ + + + KP
Sbjct: 287 VYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKP 346
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T+ ++I +A A + +M P+ TY +I M+G +F
Sbjct: 347 DVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVF 406
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
DE G + T N +L + NGL +E +F+ G P+ TY L +Y++
Sbjct: 407 DEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRC 466
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+ +L ++ KRM + GI P+
Sbjct: 467 GLFDLAMQIYKRMMEAGIYPD 487
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 160/331 (48%), Gaps = 10/331 (3%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+ + I VM + G+ A S + ++ PD Y AL++A +A A+
Sbjct: 143 VLATAIRVMARAGRLAEA----SALLDAAPGPDAGAYTALVSAF----SRAGRFRDAVAV 194
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQ-ARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
F++M +P IVTYN++L ++ A +V L + E +APD YTYN ++
Sbjct: 195 FRRMVD-SGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCC 253
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ + KE V MK++ +PD +TFN L+D YGK + D+ +V + + P++
Sbjct: 254 RRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSV 313
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+NS+I +Y K L +A + Q+M P +TY +I+ + A +DE
Sbjct: 314 VTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDE 373
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ + G + T NA+++ + + G E +F+ + G PD T+ L + + +
Sbjct: 374 MVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGL 433
Query: 446 KELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
V + K M++ G +P + ++ + ++S
Sbjct: 434 DSEVSGVFKEMKKAGYIPERDTYVSLISSYS 464
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 157/402 (39%), Gaps = 75/402 (18%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI+ + + G+ A+ + EM +GC+P+ YNALI H R K +
Sbjct: 347 DVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMH-GVRGKFPEMMAV 405
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH---------------- 247
F+ + P+IVT+N LL Q +V+ +FKE+
Sbjct: 406 FDEFRSAGFV----PDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLIS 461
Query: 248 -------------------ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
E+ + PD+ TYN V+ A + G ++ E + + M+ CKP
Sbjct: 462 SYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKP 521
Query: 289 DIITFNLLIDSYGKRQAFDKM-----------------------------------EQVF 313
D +++ L+ +Y + DKM E+ F
Sbjct: 522 DEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAF 581
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
L + + N+M+ YGK R+ K E + M S TY ++ MY
Sbjct: 582 LELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRL 641
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ + I E+ G + N ++ AY G EA LF G+ PD TY
Sbjct: 642 GDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTY 701
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ K+Y +M E +L++ M G PN+R + +E +
Sbjct: 702 NIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGY 743
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 138/295 (46%), Gaps = 10/295 (3%)
Query: 128 CLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
+++++ M + Y D Y+ +++ + + G+ A LF+EM C+PD Y++L+
Sbjct: 472 AMQIYKRMMEAGIY-PDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLL 530
Query: 188 TAHLHTR--DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
A+ + + DK KAL+ + ER +P+ L+ ++ N+ + F E
Sbjct: 531 HAYANAKRLDKMKALSDDIY-------SERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLE 583
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
L + + DI N ++ YGKN M++++E +LS MK + T+N L+ Y +
Sbjct: 584 LRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGD 643
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+K E + + S +P ++N++I YG+ +A +F +M P +TY
Sbjct: 644 CEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNI 703
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
+ Y A E+ + G T N+++E YC NG T+A + N
Sbjct: 704 FVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSN 758
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + + G + +E+++SG RPD YN +I A+ + + +A F
Sbjct: 631 YNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAY----GRKGQMKEASRLF 686
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+MK KP++VTYNI +++ ++ L + + P+ TYN +++ Y +
Sbjct: 687 SEMK-CSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCR 745
Query: 268 NGMIKEMESVLSRM 281
NG + + + +S +
Sbjct: 746 NGKLTDAKIFVSNL 759
>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
Length = 597
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 158/322 (49%), Gaps = 11/322 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ GQ A + SEM+ +G P +VYNA + L KA+ KA+ +
Sbjct: 210 YALLLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLL----KARCSEKAVEVY 265
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
Q+MK ERC+ N TY +++ +A +F+E+ P+I TY +++A+ +
Sbjct: 266 QRMK-KERCRTNTZTYXLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAR 324
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G+ ++ E V M+ +PD+ +N L+++Y + ++F + H +P +
Sbjct: 325 EGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRAS 384
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N ++ +G+A L +AE FQ++ P+ ++ +++ + NV+R E+ +L
Sbjct: 385 YNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLH 444
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE-----NSHNMGVTPDSSTYKLLYKAYTK 442
K G LNAML AY G + + LF + + G PD+STY +L AY +
Sbjct: 445 KSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGASAG-APDTSTYNVLVNAYGR 503
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
A + ++ + + G+ +
Sbjct: 504 AGYLDRMEAAFRSLAARGLAAD 525
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 125/247 (50%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+P+I+ YN+L+ A Q R + + A + L E+ P TY ++ AY +G + E
Sbjct: 169 RPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQLHRAEG 228
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
V+S M+ N P +N +D K + +K +V++ + + + T+ MI YG
Sbjct: 229 VISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTZTYXLMINVYG 288
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
KA + VF++M ++ P+ TY ++ + +A E+F+E+ + G + V
Sbjct: 289 KANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVY 348
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
NA++EAY GLP A +F +MG PD ++Y +L A+ +A + + + + +
Sbjct: 349 AYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQEL 408
Query: 457 EQNGIVP 463
+Q G+ P
Sbjct: 409 KQQGMRP 415
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 142/302 (47%), Gaps = 6/302 (1%)
Query: 171 MRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRAC 230
+R S RPD YN LI A+ R ++A A + + RC P TY +LLRA
Sbjct: 163 LRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMALLEA-----RCVPTEDTYALLLRAY 217
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
+ + + + E+ + + P YN +D K ++ V RMK +C+ +
Sbjct: 218 CGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNT 277
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
T+ L+I+ YGK +VF+ + KP + T+ +++ + + L KAE VF++
Sbjct: 278 ZTYXLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEE 337
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M + P Y ++ Y A EIF + +G + ++ N +++A+ GL
Sbjct: 338 MQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGL 397
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
EA+ F+ G+ P ++ LL A+ ++ ++++ ++ ++G+ P+ F L
Sbjct: 398 HQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDT-FALN 456
Query: 471 AL 472
A+
Sbjct: 457 AM 458
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 137/271 (50%), Gaps = 17/271 (6%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
EVF MQ Q + D Y+ L+ + G + A +FS M + GC PD + YN L+ A
Sbjct: 333 EVFEEMQ-QAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDA 391
Query: 190 HLHTRDKAKALAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
+A +A FQ++K GM +P + ++ +LL A A++ NV + + +LH
Sbjct: 392 F----GRAGLHQEAEAAFQELKQQGM---RPTMKSHMLLLSAHARSGNVARCEEVMAQLH 444
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK----SNQCKPDIITFNLLIDSYGKR 303
+S L PD + N +++AYG+ G + +ME + + M+ ++ PD T+N+L+++YG+
Sbjct: 445 KSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGASAGAPDTSTYNVLVNAYGRA 504
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
D+ME F+SL + T+ S I Y + + G+ VF++M P T
Sbjct: 505 GYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTA 564
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
+ ++ C + + ++ + + KD K
Sbjct: 565 KVLLAA---CSDERQVEQVTAIVRSMHKDAK 592
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 151/310 (48%), Gaps = 5/310 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS +I+ K G+ R A L +M GCRPD + + LI A KA A+ A
Sbjct: 408 YSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALC----KAAAIDSAQELL 463
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ GM+ C P++V Y+IL+ A +A+ + + + + ++ PD+ TYN V+D K
Sbjct: 464 RMSIGMD-CAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCK 522
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ I + + RM++ PD++T++++I S+ K D ++ + + +K P + T
Sbjct: 523 SRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVT 582
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
++++I KA KA VFQ+M P+ +TY +I + V +A E+ + +
Sbjct: 583 YSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMR 642
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
K T ++ C EA + + G PD TY L +A K N E
Sbjct: 643 KQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLE 702
Query: 448 LVQKLLKRME 457
LV++LLK ME
Sbjct: 703 LVEQLLKEME 712
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 159/350 (45%), Gaps = 10/350 (2%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
F + GK++ + +EV ++ Y+ + Y+ L+ + KK + A L S M G
Sbjct: 1063 FCKCGKAEDAIGLVEVM----VEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKG 1118
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
C P+ YN +I KA + + + ++M C P+IVT+N ++ A +
Sbjct: 1119 CVPNVVSYNTVIAGLC----KATKVHEGVLLLEQMLS-NNCVPDIVTFNTIIDAMCKTYR 1173
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ-CKPDIITFN 294
VD LF + ES P++ TYN ++ K+ + E +L M Q C PDIIT+N
Sbjct: 1174 VDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYN 1233
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+ID K + D+ ++F ++ P T++ +I + K R +A V + M
Sbjct: 1234 TVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKN 1293
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ P ITY +I + N+ +A EI L G V T + ++ G +A
Sbjct: 1294 GFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQA 1353
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L E G+ PD+ TY L K + A++ E L + M Q G P+
Sbjct: 1354 GELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPD 1403
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 160/337 (47%), Gaps = 6/337 (1%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
LE+F+ M++ D YS ++ + K G+ A L +M + GC P+ Y++L
Sbjct: 932 LELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSL-- 989
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
LH KA L +A Q+M C PNIVTYN ++ + +D+ L +E+ +
Sbjct: 990 --LHGLCKAGKLDEATALLQRMT-RSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVD 1046
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
P++ TY ++DA+ K G ++ ++ M P++ T+N L+D + K+ ++
Sbjct: 1047 GGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVER 1106
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
Q+ S++ P + ++N++I KA + + ++M + P +T+ II
Sbjct: 1107 ACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIID 1166
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD-LLFENSHNMGVT 427
V A E+F+ + + G + T N+++ C + +A+ LL E + G +
Sbjct: 1167 AMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCS 1226
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
PD TY + K+ + KL +M +G+ P+
Sbjct: 1227 PDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPD 1263
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 165/344 (47%), Gaps = 9/344 (2%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM 171
C L L K+ ++ Q ++FR + +W DT YS LI+ + G+ A LF EM
Sbjct: 129 CNCLLNVLVKAHQYSQAHDLFRSRIEGQWG-GDTVTYSTLISGFIRAGKILPAYELFDEM 187
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
G + V+ +++ A + A+ +F++M + C P+ VTYN ++ +
Sbjct: 188 NRKGLKAHAGVHKSILRGLC----DAGQCSDAVLHFREMS--KTCPPDSVTYNTMINGLS 241
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
++ +D L +E+ ++ AP++++YN V+ + K ++ +L +M + C PD++
Sbjct: 242 KSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVV 301
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK-ARLQGKAEYVFQK 350
++ +I+ K D+ +V ++ +P + T+ +++ + + L G E V +K
Sbjct: 302 SYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELV-RK 360
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
MT Y P+ ITY I+ ++ +++ RA ++ + + G + ++ +C G
Sbjct: 361 MTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGK 420
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
EA L E G PD + L A KA + Q+LL+
Sbjct: 421 LREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLR 464
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 153/339 (45%), Gaps = 10/339 (2%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
+E+ R M +R Y + Y+ ++ V ++ A + M +GC PD Y+ +I+
Sbjct: 355 VELVRKM-TERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIIS 413
Query: 189 AHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
KA L +A ++M +G C+P++ + L+ A +A +D L +
Sbjct: 414 GFC----KAGKLREAHDLLEQMIRRG---CRPDVACLSTLIDALCKAAAIDSAQELLRMS 466
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
APD+ Y+ ++ A K + E ES L M N+C PD++T+N ++D K +
Sbjct: 467 IGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRI 526
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ +F + + P + T++ +I ++ K A + ++M K P +TY +
Sbjct: 527 NDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSAL 586
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I V +A ++F E+ G + T N +++ C +A + E
Sbjct: 587 INGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSC 646
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
TPDS TY L A+ E ++L+ M+ G +P++
Sbjct: 647 TPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDR 685
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 147/320 (45%), Gaps = 10/320 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ LI + + G A L EM G + ++N +I A+ L AL F
Sbjct: 880 FTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLC----SARKLDSALELF 935
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M+ C P++ TY+ ++ + ++ VD L +++ +P++ TY+ ++ K
Sbjct: 936 KEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCK 995
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + E ++L RM + C P+I+T+N +ID + K D+ + + ++ +P + T
Sbjct: 996 AGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVT 1055
Query: 328 FNSMIINYGKARLQGKAE---YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ ++ + K GKAE + + M Y P+ TY ++ M+ D V RA ++
Sbjct: 1056 YTVLLDAFCKC---GKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLS 1112
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ + G V + N ++ C E LL E + PD T+ + A K
Sbjct: 1113 SMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTY 1172
Query: 445 MKELVQKLLKRMEQNGIVPN 464
++ +L ++++G PN
Sbjct: 1173 RVDIAYELFNLIQESGCTPN 1192
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 143/322 (44%), Gaps = 15/322 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ ++ K + A+WL +M GC PD Y +I K + +A
Sbjct: 268 YNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLC----KLDQVDEACRVM 323
Query: 208 QKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
KM ++R C+PN++TY L+ + ++D L +++ E P+ TYN +M +
Sbjct: 324 DKM--IQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFC 381
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK----RQAFDKMEQVFKSLMHSKEK 322
+ ++ VL M C PD I ++ +I + K R+A D +EQ+ + +
Sbjct: 382 RRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIR----RGCR 437
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P + +++I KA A+ + + M P + Y +I + A
Sbjct: 438 PDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESW 497
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
D + K V T N++++ C + +A LLF+ GV PD TY ++ ++ K
Sbjct: 498 LDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCK 557
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
N + K+L+RM++ VP+
Sbjct: 558 DNNLDSAFKMLERMKEAKCVPD 579
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 150/332 (45%), Gaps = 7/332 (2%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
Q+ + + Y+ +IA + K + + L +M ++ C PD +N +I A T +
Sbjct: 1116 QKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTY-RV 1174
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL-HESILAPDIY 256
+ Q+ C PN+VTYN L+ ++R DQ L +E+ + +PDI
Sbjct: 1175 DIAYELFNLIQE----SGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDII 1230
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TYN V+D K+ + + +M S+ PD +T++++I S K + D+ V + +
Sbjct: 1231 TYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELM 1290
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+ + P T+ ++I + K KA + Q + + P +T+ I +
Sbjct: 1291 LKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRL 1350
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY-KL 435
+A E+ + + + G T N +L+ +C L +A LFE G PD++TY L
Sbjct: 1351 RQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTL 1410
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
+ K + K+L+ ++ K M G N
Sbjct: 1411 VGHLVDKKSYKDLLAEVSKSMVDTGFKLNHEL 1442
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 15/216 (6%)
Query: 111 HCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSE 170
H + L +++ WL M K R Y D Y+ ++ + K + A LF
Sbjct: 483 HALCKAKRLPEAESWLDV------MVKNRCY-PDVVTYNSVVDGLCKSRRINDAFLLFDR 535
Query: 171 MRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRAC 230
MR +G PD Y+ +I H+ K L A ++MK +C P++VTY+ L+
Sbjct: 536 MRAAGVMPDVVTYSIVI----HSFCKDNNLDSAFKMLERMK-EAKCVPDVVTYSALINGL 590
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
+A VD+ +F+E+ AP++ TYN ++D K +++ +L M+ C PD
Sbjct: 591 CKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDS 650
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
IT+ LI+ ++E+ ++ L K+K LP
Sbjct: 651 ITYTCLINGLCNAS---RLEEAWRVLREMKDKGCLP 683
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 104/252 (41%), Gaps = 22/252 (8%)
Query: 70 RGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCL 129
+ ++ E ES V V R + D ++ K R FLLF+ +
Sbjct: 487 KAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRM---------- 536
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
+ + D YS +I K A + M+ + C PD Y+ALI
Sbjct: 537 -------RAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALING 589
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
KA + KA FQ+M G C PN+VTYN L+ + V+Q + + + +
Sbjct: 590 LC----KAGTVDKAFDVFQEMLGCG-CAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQ 644
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
PD TY +++ ++E VL MK C PD +T+ L+ + K + +
Sbjct: 645 SCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELV 704
Query: 310 EQVFKSLMHSKE 321
EQ+ K + ++E
Sbjct: 705 EQLLKEMEATEE 716
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 106/247 (42%), Gaps = 3/247 (1%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
+ VTY+ L+ +A + LF E++ L + ++ G + +VL
Sbjct: 160 DTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSD--AVL 217
Query: 279 S-RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
R S C PD +T+N +I+ K D ++ + ++ + P + ++N+++ + K
Sbjct: 218 HFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCK 277
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
A A ++ ++M P ++Y +I D V A + D++ + G V T
Sbjct: 278 ANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVIT 337
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
+++ +C G A L G P++ TY + + + N E ++L+ M
Sbjct: 338 YGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMI 397
Query: 458 QNGIVPN 464
Q G P+
Sbjct: 398 QTGCPPD 404
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 123/276 (44%), Gaps = 7/276 (2%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
ALG+F E + T N LL+A + + +++ ++ +P+++T+ ++
Sbjct: 827 ALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYR--NKLCCSPNMFTFTILI 884
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE- 321
+ G I +L M + ++I N++I + D ++FK + S
Sbjct: 885 HGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSC 944
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRA 379
P + T+++++ + K+ A + + M + +P+ +TY + ++G C + A
Sbjct: 945 PPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSL--LHGLCKAGKLDEA 1002
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+ +++ G + T N +++ +C G EA L E + G P+ TY +L A
Sbjct: 1003 TALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDA 1062
Query: 440 YTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ K E L++ M + G VPN + L+ F
Sbjct: 1063 FCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMF 1098
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 88/421 (20%), Positives = 159/421 (37%), Gaps = 108/421 (25%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ D ++ +I M K + +A LF+ ++ SGC P+ YN+L+ H K++
Sbjct: 1155 VPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLV----HGLCKSRRFD 1210
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY--- 258
+A ++M + C P+I+TYN ++ +++ VD+ LF ++ LAPD TY
Sbjct: 1211 QAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIV 1270
Query: 259 ----------------------NG----------VMDAYGKNGMIKEMESVLSRMKSNQC 286
NG ++D + K G + + +L + S
Sbjct: 1271 ISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGS 1330
Query: 287 KPDIITFNLLIDSYGK----RQAFDKME-------------------------------Q 311
PD++TF++ ID K RQA + +E
Sbjct: 1331 YPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVD 1390
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY---------------------VFQK 350
+F+ + +P T+ +++ L K Y + K
Sbjct: 1391 LFEVMRQCGCEPDNATYTTLV-----GHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSK 1445
Query: 351 MTAMKYTPSFITYEC-IITMYGYCDNVSRAREIFDELSKLGKDMK-VSTLNAMLEAYCMN 408
+ A + + C I+ M+G C + AR++F+ G D + V +AML Y +
Sbjct: 1446 LEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFE-----GMDQRNVVLWSAMLGVYVFH 1500
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE-LVQKLLKRMEQNGIVPNKRF 467
+A L+ GV PD+ T+ L A + + V + + G+ P
Sbjct: 1501 KQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDH 1560
Query: 468 F 468
F
Sbjct: 1561 F 1561
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
AD + ++ + GK G + A +F M + +++A++ ++ + + +A
Sbjct: 1454 ADVRLGCAIVDMFGKCGSPQDARKVFEGMDQR----NVVLWSAMLGVYVFHKQEEQAFG- 1508
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI-LAPDIYTYNGV 261
++ G+E +P+ VT+ LL C A +D F + L P + ++ V
Sbjct: 1509 ----LWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCV 1564
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
+D G+ G++ E E ++ M CKP T+N L+ +Y F++ +V
Sbjct: 1565 IDLLGRLGLVNEAEDLMLGMP---CKPSAATWNCLLSAYKICGDFERALRV 1612
>gi|326508346|dbj|BAJ99440.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 819
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 175/415 (42%), Gaps = 32/415 (7%)
Query: 79 SKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQ 138
S+ RVL +D + LN + + LL E+ S + VF WM+ Q
Sbjct: 87 SQVAARVLALPRADPHAVDAVLNCWAGRFARRNFPLLIREMAFSGSLEHAVYVFCWMKNQ 146
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH------ 192
Y A IY +I + + Q A LF EM+ C+PD +YN+LI AH
Sbjct: 147 ENYCARNDIYGMMIQLHARHNQVDQARGLFFEMQEWRCKPDADIYNSLINAHARAGLWRW 206
Query: 193 ---------------TRDKAKALAKALGYFQKM-KGMERCK--------PNIVTYNILLR 228
+R + A G K +E CK P++VT+NI+L
Sbjct: 207 AINIMDDMLRAAIPPSRATYNNVVNACGAAGNWKKALELCKKMIRNGVGPDLVTHNIVLS 266
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN--QC 286
A + F+ + + +APD +T N V+ K G + +L+ M+ QC
Sbjct: 267 AFKNGFQYTKATGYFEMMKGANIAPDTFTLNIVIHCLVKVGQHGDAVDLLNSMREKRVQC 326
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
PD++T+ +I SY + + VF ++ KP + ++N+++ Y + +A
Sbjct: 327 SPDVVTYTSIIHSYYVCGQVENCKAVFDMMVAEGVKPNIVSYNALLGAYASHGMHTEAFG 386
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+F+ + P ++Y ++ YG +ARE+F+E+ K + NA+++AY
Sbjct: 387 IFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYG 446
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
G+ EA L G+ PD + L A + + +L+ + GI
Sbjct: 447 SAGMFKEAISLLHEMEKDGIPPDVVSISTLLAACGRCRQTTKIDTVLEAAKFRGI 501
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 173/380 (45%), Gaps = 23/380 (6%)
Query: 111 HCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIA-DTGIYSKLIAVMGKKGQTRLAMWLFS 169
HC + + G + +++ M+++R + D Y+ +I GQ +F
Sbjct: 301 HCLVKVGQHGDA------VDLLNSMREKRVQCSPDVVTYTSIIHSYYVCGQVENCKAVFD 354
Query: 170 EMRNSGCRPDPSVYNALITAH----LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNI 225
M G +P+ YNAL+ A+ +HT +A G F+ +K +P++V+Y
Sbjct: 355 MMVAEGVKPNIVSYNALLGAYASHGMHT--------EAFGIFKLLK-QNGLRPDVVSYTT 405
Query: 226 LLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ 285
LL A ++ ++ +F E+ ++ P+ +YN ++DAYG GM KE S+L M+ +
Sbjct: 406 LLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYGSAGMFKEAISLLHEMEKDG 465
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
PD+++ + L+ + G+ + K++ V ++ + + +NS I +Y KA
Sbjct: 466 IPPDVVSISTLLAACGRCRQTTKIDTVLEAAKFRGIELNIVAYNSGIGSYLSFGDYEKAL 525
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
++ M A P +TY +I+ + + + F+++ L + ++++ +Y
Sbjct: 526 KLYATMMASNVNPDAVTYNILISGLCKLGKYAESLKFFEDMVDLRIPLTKEVYSSLICSY 585
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
EA+ F N G PD TY + +AYT V L K ME N I+P+
Sbjct: 586 VKQDKLAEAESTFINMKASGCFPDVLTYTAMIQAYTDHGSWTSVWDLFKEMEGNAILPDA 645
Query: 466 RFFLEALETFSSSLAGSQSG 485
+E + G+Q G
Sbjct: 646 IICSSLMEALNK---GNQYG 662
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 139/331 (41%), Gaps = 40/331 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ ++ G G + A+ L +M +G PD +N +++A KA GYF
Sbjct: 226 YNNVVNACGAAGNWKKALELCKKMIRNGVGPDLVTHNIVLSAF----KNGFQYTKATGYF 281
Query: 208 QKMKGME------------------------------------RCKPNIVTYNILLRACA 231
+ MKG +C P++VTY ++ +
Sbjct: 282 EMMKGANIAPDTFTLNIVIHCLVKVGQHGDAVDLLNSMREKRVQCSPDVVTYTSIIHSYY 341
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
V+ A+F + + P+I +YN ++ AY +GM E + +K N +PD++
Sbjct: 342 VCGQVENCKAVFDMMVAEGVKPNIVSYNALLGAYASHGMHTEAFGIFKLLKQNGLRPDVV 401
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
++ L+++YG+ +K +VF + + KP ++N++I YG A + +A + +M
Sbjct: 402 SYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYGSAGMFKEAISLLHEM 461
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P ++ ++ G C ++ + + G ++ + N+ + +Y G
Sbjct: 462 EKDGIPPDVVSISTLLAACGRCRQTTKIDTVLEAAKFRGIELNIVAYNSGIGSYLSFGDY 521
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+A L+ V PD+ TY +L K
Sbjct: 522 EKALKLYATMMASNVNPDAVTYNILISGLCK 552
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 147/329 (44%), Gaps = 5/329 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ G A +F ++ +G RPD Y L+ A+ ++ KA F
Sbjct: 368 YNALLGAYASHGMHTEAFGIFKLLKQNGLRPDVVSYTTLLNAY----GRSAQPEKAREVF 423
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M+ CKPN V+YN L+ A A + +L E+ + + PD+ + + ++ A G+
Sbjct: 424 NEMR-KNSCKPNKVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLAACGR 482
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
++++VL K + +I+ +N I SY ++K +++ ++M S P T
Sbjct: 483 CRQTTKIDTVLEAAKFRGIELNIVAYNSGIGSYLSFGDYEKALKLYATMMASNVNPDAVT 542
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N +I K ++ F+ M ++ + Y +I Y D ++ A F +
Sbjct: 543 YNILISGLCKLGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQDKLAEAESTFINMK 602
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G V T AM++AY +G T LF+ + PD+ L +A K N
Sbjct: 603 ASGCFPDVLTYTAMIQAYTDHGSWTSVWDLFKEMEGNAILPDAIICSSLMEALNKGNQYG 662
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFS 476
V +L+K M I N++ + E + + S
Sbjct: 663 RVLQLMKFMHDQCIQLNQKAYFEIIASCS 691
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 99/227 (43%), Gaps = 11/227 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI+ + K G+ ++ F +M + VY++LI +++ K LA+A
Sbjct: 539 DAVTYNILISGLCKLGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYV----KQDKLAEA 594
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F MK C P+++TY +++A + V LFKE+ + + PD + +M+
Sbjct: 595 ESTFINMKA-SGCFPDVLTYTAMIQAYTDHGSWTSVWDLFKEMEGNAILPDAIICSSLME 653
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
A K + ++ M + + + +I S + + ++ + L S
Sbjct: 654 ALNKGNQYGRVLQLMKFMHDQCIQLNQKAYFEIIASCSMLRDWKTASEIIEHLDSSLPSI 713
Query: 324 TLPTFNSMIINYGKARLQGKAEY---VFQKMTAMKYTPSFITYECII 367
++ N ++ GK GK E +F KM + T TY+ ++
Sbjct: 714 SVGKLNYLLNFLGKC---GKTESMMKLFYKMVSSCSTVGLSTYKVLL 757
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 170/362 (46%), Gaps = 20/362 (5%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM 171
C + +EL K+ + L + M K R Y D +S LI + K + + A M
Sbjct: 52 CHSVIQELCKAGRVDSALSLLETMIK-RGYCPDMATHSMLINELCKADKIQEAQEFLQGM 110
Query: 172 ------RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNI 225
R S C S+ N+L KAK + +A F M P++V+Y+I
Sbjct: 111 NRTISTRASSCFSYNSLLNSLC--------KAKKVHQAFAIFSTMVSERSVVPDVVSYSI 162
Query: 226 LLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ 285
L+ + + + L+K++ + P++ TYN ++ + G I + + V M S
Sbjct: 163 LIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAG 222
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
C PD+IT++ LI + + D+ ++F++++ +P T+N ++ K +A
Sbjct: 223 CSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAH 282
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLE 403
+F+KM P +TY + +YG+C+ + +A E+FDE+ G D V N +L+
Sbjct: 283 ELFRKMVERGCDPDKVTYTTL--LYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLK 340
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN-GIV 462
+ G P EA LF+ + PD+ ++ ++ +KA + ++ +RMEQ+ G
Sbjct: 341 GFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCS 400
Query: 463 PN 464
P+
Sbjct: 401 PD 402
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 103/219 (47%), Gaps = 10/219 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS LI + A LF M + GCRP+ YN L LH K +A
Sbjct: 226 DVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCL----LHGLCKESKPDEA 281
Query: 204 LGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
F+KM +ER C P+ VTY LL ++Q +F E+ PD+ YN ++
Sbjct: 282 HELFRKM--VERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLL 339
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE- 321
+ + G E + M S +CKPD ++ N++ID K + D +VF+ +
Sbjct: 340 KGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGC 399
Query: 322 KPTLPTFNSMIINY-GKARLQGKAEYVFQKMTAMKYTPS 359
P L T+NS+I G+ RL +A VF+++ +K +P
Sbjct: 400 SPDLVTYNSLIFGLCGEQRLS-EAMKVFKEIDRLKLSPD 437
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 10/188 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + K+ + A LF +M GC PD Y L+ + + +A+ F
Sbjct: 265 YNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNV----GKIEQAVEVF 320
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M KG + P++V YN LL+ +A + LF+ + PD ++N ++D
Sbjct: 321 DEMVSKGHD---PDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGL 377
Query: 266 GKNGMIKEMESVLSRMKSNQ-CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
K + + V RM+ + C PD++T+N LI Q + +VFK + K P
Sbjct: 378 SKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPD 437
Query: 325 LPTFNSMI 332
FN ++
Sbjct: 438 PHAFNVLL 445
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 7/186 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L K K + E+FR M +R D Y+ L+ G+ A+ +F EM +
Sbjct: 268 LLHGLCKESKPDEAHELFRKMV-ERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSK 326
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G PD YN L+ +A +A FQ M E CKP+ V++NI++ ++A+
Sbjct: 327 GHDPDVVAYNCLLKGFF----RAGKPGEARQLFQVMVSRE-CKPDTVSHNIMIDGLSKAK 381
Query: 235 NVDQVNALFKELHESI-LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+D +F+ + + +PD+ TYN ++ + E V + + PD F
Sbjct: 382 RLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAF 441
Query: 294 NLLIDS 299
N+L+++
Sbjct: 442 NVLLEA 447
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/262 (19%), Positives = 120/262 (45%), Gaps = 12/262 (4%)
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM- 281
++++ C R VD +L + + + PD+ T++ +++ K I+E + L M
Sbjct: 53 HSVIQELCKAGR-VDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMN 111
Query: 282 -----KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK-PTLPTFNSMIINY 335
+++ C ++N L++S K + + +F +++ + P + +++ +I +
Sbjct: 112 RTISTRASSC----FSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGF 167
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
K G+AE ++++M + P+ TY + ++ A+ +++E+ G V
Sbjct: 168 CKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDV 227
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
T + ++ + + +A LFE + G P++ TY L K + + +L ++
Sbjct: 228 ITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRK 287
Query: 456 MEQNGIVPNKRFFLEALETFSS 477
M + G P+K + L F +
Sbjct: 288 MVERGCDPDKVTYTTLLYGFCN 309
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 19/193 (9%)
Query: 72 RKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEV 131
++S+ E+ EL R ++ D + + T Y F +GK + Q +EV
Sbjct: 274 KESKPDEAHELFRKMVERGCDPDKVTYTTLLYG-----------FCNVGKIE---QAVEV 319
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
F M + + D Y+ L+ + G+ A LF M + C+PD +N +I
Sbjct: 320 FDEMV-SKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDG-- 376
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KAK L A+ F++M+ C P++VTYN L+ + + + +FKE+ L
Sbjct: 377 --LSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKL 434
Query: 252 APDIYTYNGVMDA 264
+PD + +N +++A
Sbjct: 435 SPDPHAFNVLLEA 447
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 158/328 (48%), Gaps = 9/328 (2%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
+ Y+ D Y LI + K GQ + A+ L EM S +P+ +Y+ALI K
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLC----KDG 209
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
++ ALG ++ G + VTYN L+ C +V L ++ + PD YT+
Sbjct: 210 FVSDALGLCSQI-GERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTF 268
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N ++DA K G I E + VL+ M KPDI+T+N L++ Y R+ + ++F ++
Sbjct: 269 NILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVK 328
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--V 376
+P + +N +I Y K ++ +A +F+++ P+ +Y +I G C++ +
Sbjct: 329 RGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLID--GLCNSGRI 386
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
S +++ DE+ + V T N +++A C G EA + GV P+ TY +
Sbjct: 387 SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAM 446
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y N + + + RM ++G+ P+
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKSGLEPD 474
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 158/347 (45%), Gaps = 18/347 (5%)
Query: 128 CLEVFRWMQKQRWYI--------ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
C V RW + + D ++ LI + K+G+ A + + M G +PD
Sbjct: 240 CCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPD 299
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVD 237
YNAL+ + + + +A F +M +G+E P+++ YN+L+ + + VD
Sbjct: 300 IVTYNALMEGYCSREN----VHEARELFNRMVKRGLE---PDVLNYNVLIDGYCKTKMVD 352
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ LFKEL L P I +YN ++D +G I ++ +L M + PD++T+N+LI
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
D+ K + V +M KP + T+N+M+ Y A+ +F +M
Sbjct: 413 DALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE 472
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P + Y +I Y + V A +F E+ +++ N++++ C G L
Sbjct: 473 PDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQEL 532
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ + G +PD TY +L A+ K + L +++ + GI P+
Sbjct: 533 LDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPD 578
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 150/339 (44%), Gaps = 10/339 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + G+ L EM S PD YN LI A K + +ALG
Sbjct: 373 YNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALC----KEGRILEALGVL 428
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
M KG+ KPNIVTYN ++ NV+ +F + +S L PDI YN +++ Y
Sbjct: 429 VMMMKKGV---KPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGY 485
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K M+ E + M+ PDI ++N LID ++++ + S + P +
Sbjct: 486 CKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDV 545
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+N ++ + K + KA +F+++ + P F T I+ + + A +
Sbjct: 546 ITYNILLDAFCKTQPFDKAISLFRQIVEGIW-PDFYTNHAIVDNLCKGEKLKMAEDALKH 604
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
L G V T ++ A C +G EA LL + PD+ T++++ + N
Sbjct: 605 LLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNE 664
Query: 446 KELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQS 484
+ +KL + M G+V ++ ++ F + +G QS
Sbjct: 665 TDKAEKLREEMIARGLVNIEKSLNQSHNVFFPASSGFQS 703
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 155/362 (42%), Gaps = 54/362 (14%)
Query: 145 TGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKA---LA 201
T ++ KL+ + + G A+ LF+++++ G P + + LI + H A A LA
Sbjct: 55 TSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLA 114
Query: 202 KAL--GYFQKMKGMERCKPNIVTYNILLRA-C----------------AQARNVDQ---- 238
L GY +PN+VT+N ++ C AQ DQ
Sbjct: 115 TILKSGY----------QPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYG 164
Query: 239 --VNA------------LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
+N L +E+ +S + P++ Y+ ++D K+G + + + S++
Sbjct: 165 TLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGER 224
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
D +T+N LID + ++ Q+ ++ P TFN +I K +A
Sbjct: 225 GILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEA 284
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAML 402
+ V M+ P +TY + M GYC +NV ARE+F+ + K G + V N ++
Sbjct: 285 QGVLAMMSKRGEKPDIVTYNAL--MEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+ YC + EA +LF+ N + P ++Y L + V+KLL M +
Sbjct: 343 DGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQP 402
Query: 463 PN 464
P+
Sbjct: 403 PD 404
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 23/218 (10%)
Query: 100 LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG 159
+N Y K + +LF+E+ + + I D Y+ LI + G
Sbjct: 482 INGYCKTEMVDEAIVLFKEM-----------------RHKNLIPDIASYNSLIDGLCNLG 524
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
+ L EM +SG PD YN L+ A K + KA+ F+++ +E P+
Sbjct: 525 RIPHVQELLDEMCDSGQSPDVITYNILLDAFC----KTQPFDKAISLFRQI--VEGIWPD 578
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
T + ++ + + K L +P++ TY +++A K+G E +LS
Sbjct: 579 FYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLS 638
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
+M+ N PD ITF ++I +R DK E++ + ++
Sbjct: 639 KMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMI 676
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 104/268 (38%), Gaps = 15/268 (5%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
++ G+FQ + C+ RNVD F + P ++
Sbjct: 16 SRFFGHFQPQNPHKNCR---------------FRNVDDAVTCFNRMVRVFPPPPTSVFDK 60
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ A + G S+ ++++S P I TF +LI+ Y + + +++ S
Sbjct: 61 LLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSG 120
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P L TFN++I + + KA Q + A Y TY +I + A
Sbjct: 121 YQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAAL 180
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ E+ K + +A+++ C +G ++A L G+ D+ TY L
Sbjct: 181 HLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGC 240
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFF 468
+ V +LL +M + + P+ F
Sbjct: 241 CSVGRWQEVTQLLTKMVRENVDPDDYTF 268
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 119/288 (41%), Gaps = 5/288 (1%)
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
H + + + A+ F +M + P V ++ LL A + + +LF +L +
Sbjct: 28 HKNCRFRNVDDAVTCFNRMVRVFPPPPTSV-FDKLLGAIVRMGHYPTAISLFTQLQSKGI 86
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
+P I T+ +++ Y S+L+ + + +P+++TFN +I+ + K
Sbjct: 87 SPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALD 146
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
++L+ T+ ++I K A ++ Q+M P+ + Y +I G
Sbjct: 147 FCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALID--G 204
Query: 372 YCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
C + VS A + ++ + G + T N++++ C G E L V PD
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
T+ +L A K Q +L M + G P+ + +E + S
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCS 312
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 149/317 (47%), Gaps = 5/317 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ LI + K G+ AM LF +M GCRPD Y +I K A A G
Sbjct: 171 FTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLC----KIGETAAAAGLL 226
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+KM+ C+PN+VTY+ ++ + + R V++ +F + ++PDI+TYN ++
Sbjct: 227 KKMEE-AGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCN 285
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
KE ++L+ M+S PDI+TFN+L+D+ K + + V K++ +P + T
Sbjct: 286 FSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVT 345
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
++S++ Y +A +F M P +Y +I Y + A+++F+E+
Sbjct: 346 YSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMI 405
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G + N ++ C G EA LF+N H G P+ TY +L + K
Sbjct: 406 HQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFG 465
Query: 448 LVQKLLKRMEQNGIVPN 464
+L + M+ PN
Sbjct: 466 KAFRLFRAMQSTYSKPN 482
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 170/356 (47%), Gaps = 10/356 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L K K+ Q +E+F M R D Y+ +I + K G+T A L +M +
Sbjct: 174 LINWLCKVGKFAQAMELFDDMVA-RGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEA 232
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC+P+ Y+ +I +H K + + +AL F MK ++ P+I TYN L++
Sbjct: 233 GCQPNVVTYSTIIDSH----RKDRRVNEALDIFSYMK-VKGISPDIFTYNSLIQGLCNFS 287
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ +AL E+ + PDI T+N ++D K G + E + VL M +PD++T++
Sbjct: 288 QWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYS 347
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
L+ Y R + ++F +++ KP + ++N +I Y K + +A+ +F +M
Sbjct: 348 SLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQ 407
Query: 355 KYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
TP+ ++Y +I +G C ++ AR +F + G + T + +L+ +C G
Sbjct: 408 GLTPNNVSYNTLI--HGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFG 465
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+A LF + P+ Y +L A K+ +KL + G+ PN + +
Sbjct: 466 KAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIY 521
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 150/338 (44%), Gaps = 6/338 (1%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ L++F +M K + D Y+ LI + Q + A L +EMR+ PD +N L
Sbjct: 256 EALDIFSYM-KVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVL 314
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
+ T K +++A G + M M +P++VTY+ L+ + V + LF +
Sbjct: 315 V----DTICKEGKVSEAQGVLKTMTEMG-VEPDVVTYSSLMYGYSLRSEVVEARKLFDAM 369
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
PD+++YN +++ Y K I E + + + M P+ +++N LI + +
Sbjct: 370 ITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSL 429
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ +FK++ + P L T++ ++ + K GKA +F+ M + P+ + Y +
Sbjct: 430 REARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNIL 489
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I N+ AR++F EL G ++ C GL EA F N G
Sbjct: 490 IDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGC 549
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
PD +Y ++ + + + +L+ M G + +
Sbjct: 550 PPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIAD 587
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 146/321 (45%), Gaps = 12/321 (3%)
Query: 148 YSKLIAVMGKKGQT-RLAMWLFSEMRNSGCRPDPSVYNALIT--AHLHTRDKA-KALAKA 203
++KL++ + K GQ + L +M +G P+ + LI +HL D A LAK
Sbjct: 100 FTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKI 159
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ G++ P IVT+ L+ + Q LF ++ PD+YTY +++
Sbjct: 160 IKL-----GLQ---PTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIIN 211
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K G +L +M+ C+P+++T++ +IDS+ K + ++ +F + P
Sbjct: 212 GLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISP 271
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T+NS+I +A + +M ++ P +T+ ++ VS A+ +
Sbjct: 272 DIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVL 331
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
++++G + V T ++++ Y + EA LF+ G PD +Y +L Y K
Sbjct: 332 KTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKV 391
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+ ++L M G+ PN
Sbjct: 392 KRIDEAKQLFNEMIHQGLTPN 412
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 117/256 (45%), Gaps = 9/256 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS L+ + + A LF M GC+PD YN LI + K K + +A
Sbjct: 342 DVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYC----KVKRIDEA 397
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
F +M +G+ PN V+YN L+ Q ++ + LFK +H + P+++TY+ +
Sbjct: 398 KQLFNEMIHQGL---TPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSIL 454
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+D + K G + + M+S KP+++ +N+LID+ K ++F L
Sbjct: 455 LDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGL 514
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
+P + ++I K L +A F+ M P I+Y II + + + SRA +
Sbjct: 515 QPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQ 574
Query: 382 IFDELSKLGKDMKVST 397
+ E+ G V T
Sbjct: 575 LIGEMRDKGFIADVGT 590
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 114/248 (45%), Gaps = 1/248 (0%)
Query: 218 PNIVTYNILLRACAQ-ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
P I+ + LL A + + D V +L K++ + L+P+IYT + +++ + + S
Sbjct: 95 PCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFS 154
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
VL+++ +P I+TF LI+ K F + ++F ++ +P + T+ ++I
Sbjct: 155 VLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLC 214
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
K A + +KM P+ +TY II + V+ A +IF + G +
Sbjct: 215 KIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIF 274
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
T N++++ C EA L ++ + PD T+ +L K Q +LK M
Sbjct: 275 TYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTM 334
Query: 457 EQNGIVPN 464
+ G+ P+
Sbjct: 335 TEMGVEPD 342
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 154/324 (47%), Gaps = 11/324 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + K G T A+ L M C+PD VY ++I + K + + +A F
Sbjct: 175 YGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLC----KDRQVTEAFNLF 230
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
KM G + P+I TY L+ + V L ++ S + PD+ ++ V+DA K
Sbjct: 231 SKMVG-QGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCK 289
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G I E V+ M +P+++T+N L+D + + D+ +VF +++H+ P + +
Sbjct: 290 EGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVIS 349
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE---IFD 384
+N++I Y K + KA Y+F++M + P+ +TY + M+G C +V R ++ +F
Sbjct: 350 YNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTL--MHGLC-HVGRLQDAIALFH 406
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E+ G+ ++T +L+ C EA L + + PD Y ++ +A
Sbjct: 407 EMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAG 466
Query: 445 MKELVQKLLKRMEQNGIVPNKRFF 468
E + + + G+ PN R +
Sbjct: 467 ELEAARDIFSNLSSKGLRPNVRTY 490
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 129/304 (42%), Gaps = 9/304 (2%)
Query: 163 LAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVT 222
A + +++ G +PD + + LI L K + AL F KM G E +PN+VT
Sbjct: 120 FAFSVLAKILKLGLQPDTATFTTLIRG-LCVEGK---IGDALHLFDKMIG-EGFQPNVVT 174
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y L+ + N + L + + + PD+ Y ++D+ K+ + E ++ S+M
Sbjct: 175 YGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMV 234
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
PDI T+ LI S + + + +++SK P + F++++ K
Sbjct: 235 GQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKIT 294
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNA 400
+A V M P+ +TY + M G+C + A ++FD + G V + N
Sbjct: 295 EAHDVVDMMIIRGVEPNVVTYNAL--MDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNT 352
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
++ YC +A LFE + P++ TY L + L M +G
Sbjct: 353 LINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHG 412
Query: 461 IVPN 464
+P+
Sbjct: 413 QIPD 416
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 135/318 (42%), Gaps = 44/318 (13%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ D I+S ++ + K+G+ A + M G P+ YNAL+ H + +
Sbjct: 274 MPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSE----MD 329
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+A+ F M PN+++YN L+ + + +D+ LF+E+ + L P+ TYN +
Sbjct: 330 EAVKVFDTMVH-NGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTL 388
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
M G +++ ++ M ++ PD+ T+ +L+D K+ D+ + K++ S
Sbjct: 389 MHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNM 448
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P + + +I +A G+ E AR+
Sbjct: 449 DPDIQIYTIVIDGMCRA---GELE--------------------------------AARD 473
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY- 440
IF LS G V T M+ C GL EA+ LF G +PD TY + +
Sbjct: 474 IFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLL 533
Query: 441 -TKANMK--ELVQKLLKR 455
K ++ +L+Q++L R
Sbjct: 534 QNKEALRAIQLLQEMLAR 551
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/356 (18%), Positives = 134/356 (37%), Gaps = 72/356 (20%)
Query: 180 PSVYNALITAHLHTRD-KAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
P +++L H++ L AL F +M M P+ V +N LL + A+ +
Sbjct: 27 PPYFSSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHP-PPSTVDFNRLLTSIAKTKQYPT 85
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGK------------------------------- 267
V +L ++ + PD+YT N +++++
Sbjct: 86 VFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIR 145
Query: 268 ----NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
G I + + +M +P+++T+ LI+ K + ++ +S+ +P
Sbjct: 146 GLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQP 205
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII-TMYGYCD-------- 374
+ + S+I + K R +A +F KM +P TY +I ++ C+
Sbjct: 206 DVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLL 265
Query: 375 --------------------------NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
++ A ++ D + G + V T NA+++ +C+
Sbjct: 266 NQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQ 325
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA +F+ + G P+ +Y L Y K + L + M Q ++PN
Sbjct: 326 SEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPN 381
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 85/195 (43%), Gaps = 22/195 (11%)
Query: 100 LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG 159
+N Y K+ R + LFEE+ C Q+ I +T Y+ L+ + G
Sbjct: 354 INGYCKIQRMDKATYLFEEM--------C---------QKELIPNTVTYNTLMHGLCHVG 396
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
+ + A+ LF EM G PD + Y L L K L +A+ + ++G P+
Sbjct: 397 RLQDAIALFHEMVAHGQIPDLATYRIL----LDYLCKKSHLDEAMALLKTIEG-SNMDPD 451
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
I Y I++ +A ++ +F L L P++ TY +++ + G++ E +
Sbjct: 452 IQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFM 511
Query: 280 RMKSNQCKPDIITFN 294
M N C PD T+N
Sbjct: 512 EMDGNGCSPDGCTYN 526
>gi|334182677|ref|NP_001185030.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191659|gb|AEE29780.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 886
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 156/328 (47%), Gaps = 5/328 (1%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L + + + L F W+++Q + D Y+ ++ +G+ Q L EM GC+P
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQP 397
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
+ YN LI H+ +A L +A+ F +M+ CKP+ VTY L+ A+A +D
Sbjct: 398 NTVTYNRLI----HSYGRANYLNEAMNVFNQMQ-EAGCKPDRVTYCTLIDIHAKAGFLDI 452
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+++ + L+PD +TY+ +++ GK G + + M C P+++T+N+++D
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
+ K + + ++++ + ++ +P T++ ++ G +AE VF +M + P
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
Y ++ ++G NV +A + + + G V T N++L + EA L
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMK 446
+N +G+ P TY LL T K
Sbjct: 633 QNMLALGLRPSLQTYTLLLSCCTDGRSK 660
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 120/275 (43%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
ALG+F +K K + TY ++ +A+ +N L E+ P+ TYN
Sbjct: 345 GNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNR 404
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ +YG+ + E +V ++M+ CKPD +T+ LID + K D +++ +
Sbjct: 405 LIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG 464
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P T++ +I GKA A +F +M TP+ +TY ++ ++ N A
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+++ ++ G + T + ++E G EA+ +F PD Y LL +
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLW 584
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
KA E + + M G+ PN L TF
Sbjct: 585 GKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTF 619
>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
Length = 1013
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 155/346 (44%), Gaps = 42/346 (12%)
Query: 132 FRWMQK--QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
F++ Q+ R + D +Y+ I + G+ + A +EMRN G +PD S YN +I +
Sbjct: 539 FKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVS 598
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL----------------------- 226
H + AKAL +MK M KPN++TYN L
Sbjct: 599 HCRKGETAKALK----LLHEMK-MSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSA 653
Query: 227 ------------LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
L+AC+Q+R +D + + + + + L DI YN ++ +GM ++
Sbjct: 654 GFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKA 713
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
VL M + PD ITFN LI + K D + ++H P + TFN+++
Sbjct: 714 TVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGG 773
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
G+A V +M P+ +TY+ + T +G N A ++ E+ G K
Sbjct: 774 LESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPK 833
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
VST NA++ + G+ T+A LF++ GV P S TY +L +
Sbjct: 834 VSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGW 879
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 163/365 (44%), Gaps = 18/365 (4%)
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
++ M K+R + Y LI K A+ ++ +M G + + + ++L+
Sbjct: 436 YKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNG-- 493
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
R K + +A+ F+ G + V Y L+ +A ++ +EL + +
Sbjct: 494 -LRQNGK-IEEAMALFKDASG-SGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNM 550
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
PD YN ++ G KE +S L+ M++ KPD T+N +I S+ ++ K +
Sbjct: 551 LPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALK 610
Query: 312 VFKSLMHSKEKPTLPTFNSMIIN-YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+ + S KP L T+N+++ +G ++ KA+Y+ +M + ++PS +T+ ++
Sbjct: 611 LLHEMKMSSIKPNLITYNTLVAGLFGTGAVE-KAKYLLNEMVSAGFSPSSLTHRRVLQAC 669
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
+ +I + + G ++ N +L+ C +G+ +A ++ E G+ PD+
Sbjct: 670 SQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDT 729
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQS----GS 486
T+ L + K++ + +M I PN + TF++ L G +S G
Sbjct: 730 ITFNALILGHCKSSHLDNAFATYAQMLHQNISPN-------IATFNTLLGGLESVGRIGE 782
Query: 487 AKTDL 491
A T L
Sbjct: 783 AGTVL 787
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 144/352 (40%), Gaps = 32/352 (9%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL------- 200
Y+ L+A + GQ A + M+ +G P+ + Y I + T+ +A
Sbjct: 207 YNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMV 266
Query: 201 ------------------------AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
++A F++M + PN VTY L+ + A+A
Sbjct: 267 RNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVG-AAPNHVTYCTLIDSLAKAGRG 325
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
++ +L E+ + D+ TY +MD GK G E++ L S+ P+ +T+ +L
Sbjct: 326 KELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVL 385
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
ID+ K D+ EQV + P + TF+S+I + K L KA + M
Sbjct: 386 IDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGI 445
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
P+ +TY +I + A E++ ++ G + +++++ NG EA
Sbjct: 446 NPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMA 505
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
LF+++ G++ D Y L KA K + + ++P+ +
Sbjct: 506 LFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVY 557
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 7/214 (3%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L++ WM + AD +Y+ L+ V+ G TR A + EM SG PD +NALI
Sbjct: 679 LDIHEWMMNAGLH-ADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALIL 737
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
H K+ L A + +M + PNI T+N LL + + + E+ +
Sbjct: 738 GHC----KSSHLDNAFATYAQML-HQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEK 792
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
S L P+ TY+ + +GK E + M P + T+N LI + K +
Sbjct: 793 SGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQ 852
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIIN-YGKARLQ 341
+++FK + PT T++ ++ Y AR Q
Sbjct: 853 AKELFKDMQKRGVHPTSCTYDILVSGWYDLAREQ 886
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 117/287 (40%), Gaps = 15/287 (5%)
Query: 177 RP-DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
RP DP+ NAL+ +H R A+A + +P V YNILL A + +
Sbjct: 69 RPADPASLNALLYSHCRLRLLRPAIAL----------LRSSRPTTVAYNILLAALSDHAH 118
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
A+ E+ + + D T N ++ +NG + ++ R D+I +N
Sbjct: 119 AP---AVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGGGIHAL-DVIGWNT 174
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
LI Y + V + + +N+++ + +A A V M
Sbjct: 175 LIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAG 234
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
P+ TY I Y V A ++++ + + G + V TL+A++ C +G +EA
Sbjct: 235 VDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAY 294
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
LF +G P+ TY L + KA + + LL M G+V
Sbjct: 295 ALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVV 341
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 140/341 (41%), Gaps = 30/341 (8%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALG 205
Y+ L+A + A + +EM G D N L+ D A ALA G
Sbjct: 106 YNILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADRGG 162
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+ +++ +N L+ + + ++ + L D+ YN ++ +
Sbjct: 163 GIHAL--------DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGF 214
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ G + VL MK P++ T+ I Y + + ++ +++ ++ + +
Sbjct: 215 CRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDV 274
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T ++++ + +A +F++M + P+ +TY T+ R +E+
Sbjct: 275 VTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTY---CTLIDSLAKAGRGKELLSL 331
Query: 386 LSKL---GKDMKVSTLNAMLEAYCMNGLPTEA--DLLFENSHNMGVTPDSSTYKLLYKAY 440
L ++ G M + T A+++ G E L F S N+ +P+ TY +L A
Sbjct: 332 LGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNL--SPNGVTYTVLIDAL 389
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
KA+ + +++L ME+ I PN + TFSS + G
Sbjct: 390 CKAHNVDEAEQVLLEMEEKSISPN-------VVTFSSVING 423
>gi|8778269|gb|AAF79278.1|AC068602_1 F14D16.2 [Arabidopsis thaliana]
Length = 977
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 156/328 (47%), Gaps = 5/328 (1%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L + + + L F W+++Q + D Y+ ++ +G+ Q L EM GC+P
Sbjct: 455 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQP 514
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
+ YN LI H+ +A L +A+ F +M+ CKP+ VTY L+ A+A +D
Sbjct: 515 NTVTYNRLI----HSYGRANYLNEAMNVFNQMQ-EAGCKPDRVTYCTLIDIHAKAGFLDI 569
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+++ + L+PD +TY+ +++ GK G + + M C P+++T+N+++D
Sbjct: 570 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 629
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
+ K + + ++++ + ++ +P T++ ++ G +AE VF +M + P
Sbjct: 630 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 689
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
Y ++ ++G NV +A + + + G V T N++L + EA L
Sbjct: 690 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 749
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMK 446
+N +G+ P TY LL T K
Sbjct: 750 QNMLALGLRPSLQTYTLLLSCCTDGRSK 777
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 120/275 (43%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
ALG+F +K K + TY ++ +A+ +N L E+ P+ TYN
Sbjct: 462 GNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNR 521
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ +YG+ + E +V ++M+ CKPD +T+ LID + K D +++ +
Sbjct: 522 LIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG 581
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P T++ +I GKA A +F +M TP+ +TY ++ ++ N A
Sbjct: 582 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 641
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+++ ++ G + T + ++E G EA+ +F PD Y LL +
Sbjct: 642 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLW 701
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
KA E + + M G+ PN L TF
Sbjct: 702 GKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTF 736
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 158/328 (48%), Gaps = 9/328 (2%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
+ Y+ D Y LI + K GQ + A+ L EM S +P+ +Y+ALI K
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLC----KDG 209
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
++ ALG ++ G + VTYN L+ C +V L ++ + PD YT+
Sbjct: 210 FVSDALGLCSQI-GERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTF 268
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N ++DA K G I E + VL+ M KPDI+T+N L++ Y R+ + ++F ++
Sbjct: 269 NILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVK 328
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--V 376
+P + +N +I Y K ++ +A +F+++ P+ +Y +I G C++ +
Sbjct: 329 RGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLID--GLCNSGRI 386
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
S +++ DE+ + V T N +++A C G EA + GV P+ TY +
Sbjct: 387 SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAM 446
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y N + + + RM ++G+ P+
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKSGLEPD 474
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 158/347 (45%), Gaps = 18/347 (5%)
Query: 128 CLEVFRWMQKQRWYI--------ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
C V RW + + D ++ LI + K+G+ A + + M G +PD
Sbjct: 240 CCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPD 299
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVD 237
YNAL+ + + + +A F +M +G+E P+++ YN+L+ + + VD
Sbjct: 300 IVTYNALMEGYCSREN----VHEARELFNRMVKRGLE---PDVLNYNVLIDGYCKTKMVD 352
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ LFKEL L P I +YN ++D +G I ++ +L M + PD++T+N+LI
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
D+ K + V +M KP + T+N+M+ Y A+ +F +M
Sbjct: 413 DALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE 472
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P + Y +I Y + V A +F E+ +++ N++++ C G L
Sbjct: 473 PDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQEL 532
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ + G +PD TY +L A+ K + L +++ + GI P+
Sbjct: 533 LDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPD 578
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 163/391 (41%), Gaps = 44/391 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K + L+ V M K R D Y+ L+ + A LF+ M
Sbjct: 270 ILIDALCKEGRILEAQGVLAMMSK-RGEKPDIVTYNALMEGYCSRENVHEARELFNRMVK 328
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G PD YN LI + K K + +A+ F+++ + P I +YN L+ +
Sbjct: 329 RGLEPDVLNYNVLIDGYC----KTKMVDEAMVLFKELCN-KNLVPTIASYNSLIDGLCNS 383
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ V L E+H S PD+ TYN ++DA K G I E VL M KP+I+T+
Sbjct: 384 GRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTY 443
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N ++D Y R + + +F ++ S +P + +N +I Y K + +A +F++M
Sbjct: 444 NAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRH 503
Query: 354 MKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P +Y +I G C+ + +E+ DE+ G+ V T N +L+A+C
Sbjct: 504 KNLIPDIASYNSLID--GLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPF 561
Query: 412 TEADLLFEN-----------SHNM-----------------------GVTPDSSTYKLLY 437
+A LF +H + G +P+ TY +L
Sbjct: 562 DKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILI 621
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
A K LL +ME N P+ F
Sbjct: 622 NALCKDGSFGEAMLLLSKMEDNDRPPDAITF 652
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 140/317 (44%), Gaps = 10/317 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + G+ L EM S PD YN LI A K + +ALG
Sbjct: 373 YNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALC----KEGRILEALGVL 428
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
M KG+ KPNIVTYN ++ NV+ +F + +S L PDI YN +++ Y
Sbjct: 429 VMMMKKGV---KPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGY 485
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K M+ E + M+ PDI ++N LID ++++ + S + P +
Sbjct: 486 CKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDV 545
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+N ++ + K + KA +F+++ + P F T I+ + + A +
Sbjct: 546 ITYNILLDAFCKTQPFDKAISLFRQIVEGIW-PDFYTNHAIVDNLCKGEKLKMAEDALKH 604
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
L G V T ++ A C +G EA LL + PD+ T++++ + N
Sbjct: 605 LLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNE 664
Query: 446 KELVQKLLKRMEQNGIV 462
+ +KL + M G+V
Sbjct: 665 TDKAEKLREEMIARGLV 681
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 155/362 (42%), Gaps = 54/362 (14%)
Query: 145 TGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKA---LA 201
T ++ KL+ + + G A+ LF+++++ G P + + LI + H A A LA
Sbjct: 55 TSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLA 114
Query: 202 KAL--GYFQKMKGMERCKPNIVTYNILLRA-C----------------AQARNVDQ---- 238
L GY +PN+VT+N ++ C AQ DQ
Sbjct: 115 TILKSGY----------QPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYG 164
Query: 239 --VNA------------LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
+N L +E+ +S + P++ Y+ ++D K+G + + + S++
Sbjct: 165 TLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGER 224
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
D +T+N LID + ++ Q+ ++ P TFN +I K +A
Sbjct: 225 GILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEA 284
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAML 402
+ V M+ P +TY + M GYC +NV ARE+F+ + K G + V N ++
Sbjct: 285 QGVLAMMSKRGEKPDIVTYNAL--MEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+ YC + EA +LF+ N + P ++Y L + V+KLL M +
Sbjct: 343 DGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQP 402
Query: 463 PN 464
P+
Sbjct: 403 PD 404
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 117/270 (43%), Gaps = 32/270 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K + L+ L V M K + + Y+ ++ + +A +F+ M
Sbjct: 410 ILIDALCKEGRILEALGVLVMMMK-KGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVK 468
Query: 174 SGCRPDPSVYNALITAHLHTR--DKAKALAKAL----------GYFQKMKGM-------- 213
SG PD YN LI + T D+A L K + Y + G+
Sbjct: 469 SGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPH 528
Query: 214 ------ERCK----PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
E C P+++TYNILL A + + D+ +LF+++ E I PD YT + ++D
Sbjct: 529 VQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIW-PDFYTNHAIVD 587
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K +K E L + + C P++ T+ +LI++ K +F + + + + P
Sbjct: 588 NLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPP 647
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
TF +I + KAE + ++M A
Sbjct: 648 DAITFEIIIGVLLQRNETDKAEKLREEMIA 677
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 23/218 (10%)
Query: 100 LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG 159
+N Y K + +LF+E+ + + I D Y+ LI + G
Sbjct: 482 INGYCKTEMVDEAIVLFKEM-----------------RHKNLIPDIASYNSLIDGLCNLG 524
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
+ L EM +SG PD YN L+ A K + KA+ F+++ +E P+
Sbjct: 525 RIPHVQELLDEMCDSGQSPDVITYNILLDAFC----KTQPFDKAISLFRQI--VEGIWPD 578
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
T + ++ + + K L +P++ TY +++A K+G E +LS
Sbjct: 579 FYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLS 638
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
+M+ N PD ITF ++I +R DK E++ + ++
Sbjct: 639 KMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMI 676
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 95/235 (40%)
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
RNVD F + P ++ ++ A + G S+ ++++S P I TF
Sbjct: 34 RNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATF 93
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+LI+ Y + + +++ S +P L TFN++I + + KA Q + A
Sbjct: 94 TILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLA 153
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
Y TY +I + A + E+ K + +A+++ C +G ++
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSD 213
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
A L G+ D+ TY L + V +LL +M + + P+ F
Sbjct: 214 ALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTF 268
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 108/262 (41%), Gaps = 4/262 (1%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P ++ LL A + + +LF +L ++P I T+ +++ Y S+
Sbjct: 53 PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L+ + + +P+++TFN +I+ + K ++L+ T+ ++I K
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKV 395
A ++ Q+M P+ + Y +I G C + VS A + ++ + G +
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALID--GLCKDGFVSDALGLCSQIGERGILLDA 230
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
T N++++ C G E L V PD T+ +L A K Q +L
Sbjct: 231 VTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAM 290
Query: 456 MEQNGIVPNKRFFLEALETFSS 477
M + G P+ + +E + S
Sbjct: 291 MSKRGEKPDIVTYNALMEGYCS 312
>gi|15221893|ref|NP_173324.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42571539|ref|NP_973860.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75151479|sp|Q8GYP6.1|PPR49_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18900
gi|26450017|dbj|BAC42129.1| unknown protein [Arabidopsis thaliana]
gi|28827402|gb|AAO50545.1| unknown protein [Arabidopsis thaliana]
gi|332191657|gb|AEE29778.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191658|gb|AEE29779.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 156/328 (47%), Gaps = 5/328 (1%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L + + + L F W+++Q + D Y+ ++ +G+ Q L EM GC+P
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQP 397
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
+ YN LI H+ +A L +A+ F +M+ CKP+ VTY L+ A+A +D
Sbjct: 398 NTVTYNRLI----HSYGRANYLNEAMNVFNQMQ-EAGCKPDRVTYCTLIDIHAKAGFLDI 452
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+++ + L+PD +TY+ +++ GK G + + M C P+++T+N+++D
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
+ K + + ++++ + ++ +P T++ ++ G +AE VF +M + P
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
Y ++ ++G NV +A + + + G V T N++L + EA L
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMK 446
+N +G+ P TY LL T K
Sbjct: 633 QNMLALGLRPSLQTYTLLLSCCTDGRSK 660
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 120/275 (43%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
ALG+F +K K + TY ++ +A+ +N L E+ P+ TYN
Sbjct: 345 GNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNR 404
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ +YG+ + E +V ++M+ CKPD +T+ LID + K D +++ +
Sbjct: 405 LIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG 464
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P T++ +I GKA A +F +M TP+ +TY ++ ++ N A
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+++ ++ G + T + ++E G EA+ +F PD Y LL +
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLW 584
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
KA E + + M G+ PN L TF
Sbjct: 585 GKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTF 619
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 154/315 (48%), Gaps = 5/315 (1%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ L M+ SG +PD +YN L+ +++ + +A K L MK ++ N+VTY
Sbjct: 37 ALRLLEVMKESGKKPDEILYNCLVNGLVNS-GRLEAAEKIL---DDMK-QDKVSANLVTY 91
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
L++ A A + LF+E+ + +P+ +TYN ++ YG+ G+ KE + M
Sbjct: 92 TNLIKEYANAGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDG 151
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
C D+ T+N+ I YGKR + ME++ + P T+N+++ Y K K
Sbjct: 152 VGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVK 211
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A + ++MT Y P+ TY +++ +V+ A ++F+ L G + T +AML
Sbjct: 212 AHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLS 271
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
Y +GL TEA L++ G P Y L ++Y M + + M ++GIVP
Sbjct: 272 LYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVP 331
Query: 464 NKRFFLEALETFSSS 478
+ + + ++ + +
Sbjct: 332 DTKIYTALMDAYGKA 346
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 165/344 (47%), Gaps = 9/344 (2%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
K D L+ LEV + K+ D +Y+ L+ + G+ A + +M+ +
Sbjct: 33 KLDHALRLLEVMKESGKK----PDEILYNCLVNGLVNSGRLEAAEKILDDMKQDKVSANL 88
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
Y LI + + A L FQ+MK PN TYN L++ + +
Sbjct: 89 VTYTNLIKEYAN----AGRLQDCRKLFQEMKDKGE-SPNSWTYNALIQGYGRKGLFKEAL 143
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
L+ E+ A D++TYN + YGK G++++ME +L M + PD +T+N L+D Y
Sbjct: 144 ELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVY 203
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
K+ F K ++ + + + +P + T+N M+ + K + +A +F+ + + P+
Sbjct: 204 AKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNI 263
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
+TY ++++YG + A +++DE+ + G + + ++E+Y +G+ EA F++
Sbjct: 264 VTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQD 323
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G+ PD+ Y L AY KA + L M + G VP+
Sbjct: 324 MRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPD 367
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 146/310 (47%), Gaps = 9/310 (2%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
KQ A+ Y+ LI G+ + LF EM++ G P+ YNALI + +
Sbjct: 80 KQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNSWTYNALIQGY----GR 135
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+AL + +M G+ C ++ TYNI + + ++ + L E+ + PD
Sbjct: 136 KGLFKEALELYDEMDGV-GCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQV 194
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TYN ++D Y K + +L M +P+I T+N+++ S K Q+ + Q+F++L
Sbjct: 195 TYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENL 254
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
P + T+++M+ YG+ L +A ++ +M P I Y +I YG+
Sbjct: 255 KSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMY 314
Query: 377 SRAREIFDELSKLG--KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
A F ++ K G D K+ T A+++AY G EA+LL+ G PD TY
Sbjct: 315 QEALACFQDMRKSGIVPDTKIYT--ALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYG 372
Query: 435 LLYKAYTKAN 444
+L +A+ A
Sbjct: 373 ILVRAFANAG 382
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 163/350 (46%), Gaps = 12/350 (3%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L K+ K + LE+ M ++ D Y+ ++ + + G+ A LF +M GC
Sbjct: 20 LCKTGKVTEALEMVEEMT-EKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMIERGCSA 78
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNV 236
+ YNALI K + + +A ++M KG E P+ +TYN +L + V
Sbjct: 79 NTVAYNALINGLC----KDENIERAYKLLEEMASKGYE---PDNITYNTILSGLCRMGKV 131
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK--SNQCKPDIITFN 294
+ F + +PD+ YNG++DA K G + E + M + PD+IT+N
Sbjct: 132 SEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYN 191
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
LID + + + D+ ++FK ++ P T+NS+++ + +AE +F+KM
Sbjct: 192 TLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDS 251
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P+ TY +++ + N++R E+++E+++ V NA+++ C +A
Sbjct: 252 GCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDA 311
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ E +G PD TY +L K N+ + +L M NG P+
Sbjct: 312 HKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPD 361
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 165/357 (46%), Gaps = 8/357 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ + L ++ K + E+F M +R A+T Y+ LI + K A L EM +
Sbjct: 50 IIVDRLCRAGKVDEADELFHKMI-ERGCSANTVAYNALINGLCKDENIERAYKLLEEMAS 108
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G PD YN +++ + +++A +F M P++V YN LL A +
Sbjct: 109 KGYEPDNITYNTILSGLC----RMGKVSEAKQFFDSMPSRGY-SPDVVAYNGLLDALYKE 163
Query: 234 RNVDQVNALFK--ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
V + LFK ++ + +APD+ TYN ++D + + E + + + PD +
Sbjct: 164 GKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTV 223
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
T+N ++ ++ D+ E++FK ++ S P T++ ++ + + + ++++M
Sbjct: 224 TYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEM 283
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
T +++P + +I M V A ++ +E+SK+G V T N +L+ C L
Sbjct: 284 TEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLV 343
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+A LF + G PD +Y ++ K N + L RM + +VP+ F
Sbjct: 344 DKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTF 400
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 166/354 (46%), Gaps = 12/354 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + + +K + +++F+ + + Y+ DT Y+ ++ + +K A +F +M +S
Sbjct: 193 LIDGFCRVEKTDEAMKLFKDVI-AKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDS 251
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC P+ + Y+ +++ H + +A+ L +++M +R P+++ N ++ +A+
Sbjct: 252 GCAPNGATYSIVLSGHCRVGN----MARCLELYEEMTE-KRFSPDVLLCNAVIDMLCKAK 306
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
VD + + +E+ + PD+ TYN ++D K ++ + + S M N C PDI++++
Sbjct: 307 KVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYS 366
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++++ K +F ++ K P + TFN ++ KA +A+ + M+
Sbjct: 367 VVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEH 426
Query: 355 KYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
P +T C M+G C + A +F + + G V N +L C G
Sbjct: 427 NVLPDGVT--CTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLA 484
Query: 413 EADLLFEN--SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+A L F++ + +PD TY L A +A + ++M +G P+
Sbjct: 485 QALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPD 538
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 151/329 (45%), Gaps = 9/329 (2%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
+ Y D Y+ +++ + + G+ A F M + G PD YN L+ A L+ K
Sbjct: 109 KGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDA-LYKEGK-- 165
Query: 199 ALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+A+A G F+ M +R P+++TYN L+ + D+ LFK++ PD T
Sbjct: 166 -VAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVT 224
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN ++ + + E E + +M + C P+ T+++++ + + + ++++ +
Sbjct: 225 YNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMT 284
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN-- 375
+ P + N++I KA+ A V ++M+ + P +TY I + G C
Sbjct: 285 EKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYN--ILLDGLCKTNL 342
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
V +A E+F + G + + + +L C +A +LF+ + PD T+ +
Sbjct: 343 VDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNI 402
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L KA + + LL M ++ ++P+
Sbjct: 403 LMDGLCKAGKLDEAKDLLDVMSEHNVLPD 431
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 140/333 (42%), Gaps = 17/333 (5%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFS--EMRNSGCRPDPSVYNALITA--HLHTR 194
R Y D Y+ L+ + K+G+ A LF +M + PD YN LI +
Sbjct: 144 RGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKT 203
Query: 195 DKAKALAK---ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
D+A L K A GY P+ VTYN +L A+ N+D+ +FK++ +S
Sbjct: 204 DEAMKLFKDVIAKGYM----------PDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGC 253
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
AP+ TY+ V+ + + G + + M + PD++ N +ID K + D +
Sbjct: 254 APNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHK 313
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
V + + P + T+N ++ K L KA +F M P ++Y ++
Sbjct: 314 VLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLC 373
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ V AR +FD + + V T N +++ C G EA L + V PD
Sbjct: 374 KTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGV 433
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
T L + + +L + M + G V +
Sbjct: 434 TCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVAD 466
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 121/259 (46%), Gaps = 11/259 (4%)
Query: 211 KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
KG E P++VTY+ ++ + V + + +E+ E + PD+ TY ++D + G
Sbjct: 4 KGFE---PDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
+ E + + +M C + + +N LI+ K + ++ ++ + + +P T+N+
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
++ + +A+ F M + Y+P + Y ++ V+ A +F +
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDM-- 178
Query: 391 KDMKVS----TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK-LLYKAYTKANM 445
D KV+ T N +++ +C EA LF++ G PD+ TY +L K+NM
Sbjct: 179 ADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNM 238
Query: 446 KELVQKLLKRMEQNGIVPN 464
E +++ K+M +G PN
Sbjct: 239 DE-AEEMFKKMVDSGCAPN 256
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 136/328 (41%), Gaps = 20/328 (6%)
Query: 106 VVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAM 165
+V S HC + +CLE++ M ++R+ D + + +I ++ K + A
Sbjct: 262 IVLSGHC--------RVGNMARCLELYEEMTEKRFS-PDVLLCNAVIDMLCKAKKVDDAH 312
Query: 166 WLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALGYFQKMKGMERCKPNIVTY 223
+ EM G PD YN L+ T DKA L F M C P+IV+Y
Sbjct: 313 KVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHEL------FSTMVD-NGCAPDIVSY 365
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
+++L + V LF + E L PD+ T+N +MD K G + E + +L M
Sbjct: 366 SVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSE 425
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+ PD +T L+ + + D+ ++F+ ++ + N ++ + +
Sbjct: 426 HNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQ 485
Query: 344 AEYVFQKM--TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
A F+ M + +++P +TY ++ V +A + F +++ G N +
Sbjct: 486 ALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTL 545
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPD 429
+ G +AD L + G D
Sbjct: 546 MNGLRKQGRHIQADRLTQAMKEKGFLSD 573
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 50/114 (43%)
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M + P +TY II+ V+ A E+ +E+++ G + V+T +++ C G
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EAD LF G + ++ Y L K E KLL+ M G P+
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPD 114
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 18/161 (11%)
Query: 107 VRSEH--------CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKK 158
V SEH C L L + + + + +F++M ++ +AD ++ ++A + ++
Sbjct: 422 VMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMV-EKGTVADVLPHNIVLAGLCRE 480
Query: 159 GQTRLAMWLFSEMRNSGCR--PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERC 216
G+ A+ F M S PD Y L+ A + +A + +A+ YFQ+M G C
Sbjct: 481 GKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALI----EAGRVDQAVDYFQQMTG-SGC 535
Query: 217 KPNIVTYNILLRAC-AQARNVDQVNALFKELHESILAPDIY 256
P+ V YN L+ Q R++ Q + L + + E D +
Sbjct: 536 APDYVAYNTLMNGLRKQGRHI-QADRLTQAMKEKGFLSDCF 575
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 149/322 (46%), Gaps = 6/322 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ K+ + + AM LF M G PD Y+ +I+ T +AL F
Sbjct: 81 YNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEM---LF 137
Query: 208 QKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
KM +ER C N V YN L+ + N+++ L +E+ PD TYN ++
Sbjct: 138 HKM--IERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLC 195
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+ G + E + M S PD++ +N L+D+ K D+ ++FK ++ P
Sbjct: 196 RMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTV 255
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T+NS+++ + +AE +F+KM A P+ TY +++ + V A ++ +E+
Sbjct: 256 TYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEM 315
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
SK+G V T N +L+ C L +A LF + G PD +Y ++ K N
Sbjct: 316 SKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKV 375
Query: 447 ELVQKLLKRMEQNGIVPNKRFF 468
+ L RM + +VP+ F
Sbjct: 376 HDARVLFDRMIERKLVPDVVTF 397
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 161/355 (45%), Gaps = 15/355 (4%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAM-WLFSEMRN 173
L K K + +E+F+ M ++ + D YS +I+ + K G+ A+ LF +M
Sbjct: 84 LLNAFCKETKMKEAMELFKTMA-EKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIE 142
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACA 231
GC + YNALI K + + +A ++M KG P+ +TYN +L
Sbjct: 143 RGCSANTVAYNALINGLC----KDENIERAYKLLEEMASKGY---VPDNITYNTILSGLC 195
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ V + F + +PD+ YNG++DA K G E + + + PD +
Sbjct: 196 RMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTV 255
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
T+N ++ ++ D+ E++FK ++ S P T++ ++ + +A+ A V ++M
Sbjct: 256 TYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEM 315
Query: 352 TAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
+ + P +TY I + G C V +A E+F + G + + + +L C
Sbjct: 316 SKIGAVPDVVTYN--ILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTN 373
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+A +LF+ + PD T+ +L KA + + LL +M +G P+
Sbjct: 374 KVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPD 428
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 146/346 (42%), Gaps = 5/346 (1%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L K+ K + LE+ +R A+T Y+ LI + K A L EM + G P
Sbjct: 123 LCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVP 182
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
D YN +++ + +++A +F M P++V YN LL A + D+
Sbjct: 183 DNITYNTILSGLC----RMGKVSEAKQFFDSMPSRGY-SPDVVAYNGLLDALYKEGKTDE 237
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
LFK++ PD TYN ++ + + E E + +M ++ C P+ T+++++
Sbjct: 238 AMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLS 297
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
+ + + D +V + + P + T+N ++ K L KA +F M P
Sbjct: 298 GHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 357
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
++Y ++ + V AR +FD + + V T N +++ C G EA L
Sbjct: 358 DIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLL 417
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ G PD Y L K +L + M++ G + +
Sbjct: 418 DQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 135/310 (43%), Gaps = 43/310 (13%)
Query: 157 KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERC 216
K+G+ R LF +M ++G PD YN LI GY +K +
Sbjct: 20 KQGKLRDGYKLFEQMLDNGISPDGIEYNILID----------------GYAKKGR----- 58
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
VD+ N L++E+ L P IYTYN +++A+ K +KE
Sbjct: 59 -------------------VDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAME 99
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKR-QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
+ M +PD++T++ +I K + + +E +F ++ +N++I
Sbjct: 100 LFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGL 159
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
K +A + ++M + Y P ITY I++ VS A++ FD + G V
Sbjct: 160 CKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDV 219
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK-LLYKAYTKANMKELVQKLLK 454
N +L+A G EA LF++ G PD+ TY +L K+NM E +++ K
Sbjct: 220 VAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE-AEEMFK 278
Query: 455 RMEQNGIVPN 464
+M +G PN
Sbjct: 279 KMVASGCAPN 288
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 125/256 (48%), Gaps = 7/256 (2%)
Query: 213 MERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMI 271
M C PN T+ ++L++ C Q + D LF+++ ++ ++PD YN ++D Y K G +
Sbjct: 1 MRECSPNRYTFRVVLKSFCKQGKLRDGYK-LFEQMLDNGISPDGIEYNILIDGYAKKGRV 59
Query: 272 KEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM 331
E + M S +P I T+N L++++ K + ++FK++ +P + T++++
Sbjct: 60 DEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTI 119
Query: 332 IINYGK-ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSK 388
I K ++ E +F KM + + + Y +I G C +N+ RA ++ +E++
Sbjct: 120 ISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALIN--GLCKDENIERAYKLLEEMAS 177
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
G T N +L C G +EA F++ + G +PD Y L A K +
Sbjct: 178 KGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDE 237
Query: 449 VQKLLKRMEQNGIVPN 464
KL K + G +P+
Sbjct: 238 AMKLFKDVIAKGYMPD 253
>gi|326503836|dbj|BAK02704.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 399
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 150/317 (47%), Gaps = 6/317 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ G A + SEMR G P +VYNA + L KA+ KA+ +
Sbjct: 17 YALLLRAYCTAGSLHRAEGVISEMREHGIPPSATVYNAYLDGLL----KARCAEKAVEVY 72
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
Q+MK ERC+ N TY +++ +++ +FKE+ +I TY +++A+ +
Sbjct: 73 QRMK-RERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANICTYTALVNAFAR 131
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G+ ++ E V M+ +PD+ +N L+++Y + ++F + H +P +
Sbjct: 132 EGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLMQHMGCEPDRAS 191
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N ++ YG+A L +AE VF+ + P+ ++ ++ + NV+R E+ +L
Sbjct: 192 YNILVDAYGRAGLHREAEAVFESLKRQGMAPTMKSHMLLLAAHARSGNVARCEEVMAQLH 251
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
K G LNAML AY G + + L G T D TY + AY +A E
Sbjct: 252 KSGLAPDTIALNAMLNAYGRAGRLDDMERLLAAMERRG-TRDVGTYNVAVNAYGRAGYLE 310
Query: 448 LVQKLLKRMEQNGIVPN 464
++ +E+ G+ +
Sbjct: 311 RMEAAFASLERRGLAAD 327
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 155/336 (46%), Gaps = 15/336 (4%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
+EV++ M+++R +T Y+ +I V GK Q AM +F EM++ GC+ + Y AL+
Sbjct: 69 VEVYQRMKRERCRT-NTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANICTYTALVN 127
Query: 189 AHLHTRDKAKALAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
A + KA F++M+ G E P++ YN L+ A ++A + +F +
Sbjct: 128 AFA----REGLCEKAEEVFEEMQQAGHE---PDVYAYNALMEAYSRAGFPQAASEIFSLM 180
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
PD +YN ++DAYG+ G+ +E E+V +K P + + LL+ ++ +
Sbjct: 181 QHMGCEPDRASYNILVDAYGRAGLHREAEAVFESLKRQGMAPTMKSHMLLLAAHARSGNV 240
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM--KYTPSFITYE 364
+ E+V L S P N+M+ YG+A G+ + + + + AM + T TY
Sbjct: 241 ARCEEVMAQLHKSGLAPDTIALNAMLNAYGRA---GRLDDMERLLAAMERRGTRDVGTYN 297
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
+ YG + R F L + G V T + + AY +FE +
Sbjct: 298 VAVNAYGRAGYLERMEAAFASLERRGLAADVVTWTSRMGAYARKKEYRRCLEIFEEMVDA 357
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
G PD+ T K+L A + E V +++ M +
Sbjct: 358 GCYPDAGTAKVLVAACSDERQVEQVTAIVRSMHKEA 393
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 124/251 (49%), Gaps = 2/251 (0%)
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
RC P TY +LLRA A ++ + + E+ E + P YN +D K ++
Sbjct: 9 RCVPTEDTYALLLRAYCTAGSLHRAEGVISEMREHGIPPSATVYNAYLDGLLKARCAEKA 68
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGK-RQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
V RMK +C+ + T+ L+I+ YGK +Q M +VFK + K + T+ +++
Sbjct: 69 VEVYQRMKRERCRTNTETYTLMINVYGKSKQPMSAM-KVFKEMQSIGCKANICTYTALVN 127
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
+ + L KAE VF++M + P Y ++ Y A EIF + +G +
Sbjct: 128 AFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLMQHMGCEP 187
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
++ N +++AY GL EA+ +FE+ G+ P ++ LL A+ ++ ++++
Sbjct: 188 DRASYNILVDAYGRAGLHREAEAVFESLKRQGMAPTMKSHMLLLAAHARSGNVARCEEVM 247
Query: 454 KRMEQNGIVPN 464
++ ++G+ P+
Sbjct: 248 AQLHKSGLAPD 258
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 108/223 (48%)
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
++ L E+ P TY ++ AY G + E V+S M+ + P +N +D
Sbjct: 1 MYAALLEARCVPTEDTYALLLRAYCTAGSLHRAEGVISEMREHGIPPSATVYNAYLDGLL 60
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
K + +K +V++ + + + T+ MI YGK++ A VF++M ++ +
Sbjct: 61 KARCAEKAVEVYQRMKRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANIC 120
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
TY ++ + +A E+F+E+ + G + V NA++EAY G P A +F
Sbjct: 121 TYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLM 180
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+MG PD ++Y +L AY +A + + + + +++ G+ P
Sbjct: 181 QHMGCEPDRASYNILVDAYGRAGLHREAEAVFESLKRQGMAPT 223
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 170/395 (43%), Gaps = 23/395 (5%)
Query: 84 RVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIA 143
+L R FS P V T N +K + ++G D+ L + + W
Sbjct: 49 EMLARRFS---PDVITHNTILKA---------YCQIGDLDRALS------HFRGKMWCSP 90
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
Y LI + + + A L EM C PD +VYN LI A L K A
Sbjct: 91 TAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLI-AGLCKMGKIDAARNV 149
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L KM C P+++TY L+ C Q +D+ L +++ ES L PD YN +++
Sbjct: 150 L----KMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLN 205
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K ++E+ +L M +PD ++N ++ + +++ ++ + ++ K P
Sbjct: 206 GLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGP 265
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T+NS++ + K +AE + + M + P+ ITY +I + D ++ A +
Sbjct: 266 DVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVM 325
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+++ K G + T N +L+ C G EA L E PD TY +L K
Sbjct: 326 EDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKL 385
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ + LL+ M + G PN F ++ F +
Sbjct: 386 GKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKA 420
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 161/372 (43%), Gaps = 50/372 (13%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +Y+ LIA + K G+ A + M C PD Y +LI T AL +A
Sbjct: 126 DAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTN----ALDEA 181
Query: 204 LGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+KMK G+ P+ V YN LL + +++V+ L +E+ E+ PD ++YN V
Sbjct: 182 RKLMEKMKESGL---TPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTV 238
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ ++G +E +L +M +C PD++T+N L+D + K D+ E++ + ++ +
Sbjct: 239 VACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRC 298
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI--------------- 366
PT+ T+ ++I + +A A V + M +P +TY C+
Sbjct: 299 APTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHE 358
Query: 367 ------------------ITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
I + G C V AR + + + + G + T N M++ +C
Sbjct: 359 LLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFC 418
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
G E + E + TPD TY L Y KAN + +L GI P+K
Sbjct: 419 KAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKA 472
Query: 467 FFLEALETFSSS 478
+ LE S+
Sbjct: 473 SYSSMLEGLCST 484
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 162/399 (40%), Gaps = 69/399 (17%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT Y+ ++A + + G+ A + +M C PD YN+L+ K + +A
Sbjct: 231 DTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFC----KVSKMDEA 286
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ M G RC P ++TY L+ ++A + + +++ ++ ++PD+ TYN ++D
Sbjct: 287 ERLLEDMVG-RRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLD 345
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K G ++E +L M C PD++T+++L++ K D + + ++ +P
Sbjct: 346 GLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQP 405
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY------------- 370
L TFN+MI + KA + V + M + TP +TY +I Y
Sbjct: 406 NLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL 465
Query: 371 --------------GYCDN--VSRAREIFDELSKLG--------------------KDMK 394
G C V A+E+ D ++K G D
Sbjct: 466 GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEA 525
Query: 395 VSTLNAMLEAYCMNGLPTEADLL--------FENSHNM-------GVTPDSSTYKLLYKA 439
+ L M E C L T + L+ E++ N+ G PD +TY L
Sbjct: 526 LKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDG 585
Query: 440 YTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ K N + + K M +G P+K + + F S
Sbjct: 586 FCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQS 624
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 137/319 (42%), Gaps = 11/319 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + G +++ + + +EM PD +N ++ A+ D L +AL +F
Sbjct: 27 YGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGD----LDRALSHF 82
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+G C P TY IL+ Q + +D+ L E+ + PD YN ++ K
Sbjct: 83 ---RGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCK 139
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G I +VL M C PD+IT+ LI + A D+ ++ + + S P
Sbjct: 140 MGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVA 199
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL- 386
+N+++ K + + ++M P +Y ++ A +I +++
Sbjct: 200 YNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMI 259
Query: 387 -SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
K G D V T N++++ +C EA+ L E+ P TY L +++A+
Sbjct: 260 EKKCGPD--VVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADR 317
Query: 446 KELVQKLLKRMEQNGIVPN 464
++++ M + GI P+
Sbjct: 318 LADAYRVMEDMFKAGISPD 336
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 150/363 (41%), Gaps = 42/363 (11%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + + A + +M +G PD YN L+ KA L +A
Sbjct: 305 YTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLC----KAGKLEEAHELL 360
Query: 208 QKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+ M +E+ C P++VTY+IL+ + VD L + + E P++ T+N ++D +
Sbjct: 361 EVM--VEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFC 418
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K G + E VL MK C PD++T++ LID Y K ++M+ F L S +K +
Sbjct: 419 KAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKA---NRMQDAFAILGISPDKASYS 475
Query: 327 TFNSMIINYGKARL----------QG----------------------KAEYVFQKMTAM 354
+ + + GK QG +A + Q M+
Sbjct: 476 SMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSER 535
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P+ TY +I V A + D + + G V+T ++++ +C A
Sbjct: 536 GCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAA 595
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
F+ + G PD Y +L + ++ E ++++ M + G P+ + + +
Sbjct: 596 YQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRS 655
Query: 475 FSS 477
++
Sbjct: 656 LTT 658
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 127/312 (40%), Gaps = 11/312 (3%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
F E + +P S Y ALIT + L A + R P+++T+N +
Sbjct: 11 FFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLAR-----RFSPDVITHNTI 65
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
L+A Q ++D+ + F+ + +P +TY ++ + I E +L M C
Sbjct: 66 LKAYCQIGDLDRALSHFR--GKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDC 123
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
PD +N LI K D V K ++ P + T+ S+I+ + +A
Sbjct: 124 HPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARK 183
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
+ +KM TP + Y ++ G C + + ++ +E+ + G++ + N ++
Sbjct: 184 LMEKMKESGLTPDTVAYNALLN--GLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVAC 241
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
C +G EA + E PD TY L + K + + ++LL+ M P
Sbjct: 242 LCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPT 301
Query: 465 KRFFLEALETFS 476
+ + FS
Sbjct: 302 VITYTTLIGGFS 313
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 131/330 (39%), Gaps = 40/330 (12%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA--HLHTRDKAKALA 201
D Y+ L+ + K G+ A L M C PD Y+ L+ L D A+ L
Sbjct: 336 DLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLL 395
Query: 202 KALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+ + +ER C+PN+VT+N ++ +A VD+ + + + + E PD+ TY+
Sbjct: 396 EMM--------LERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYST 447
Query: 261 VMDAYGK-----------------------------NGMIKEMESVLSRMKSNQCKPDII 291
++D Y K G ++E + V+ M C P
Sbjct: 448 LIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSS 507
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
+ L+I + D+ ++ + + +P L T++ +I K + A V M
Sbjct: 508 HYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVM 567
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P TY +I + + + A + F + G + N ++ +C +G
Sbjct: 568 LEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNV 627
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+A + + G PD++TY L ++ T
Sbjct: 628 EKAIEVMQLMLEKGCNPDAATYFSLMRSLT 657
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 104/248 (41%), Gaps = 15/248 (6%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
F + GK D+ + LE + K+ D YS LI K + + A + G
Sbjct: 417 FCKAGKVDEGHKVLE----LMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------G 466
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
PD + Y++++ L + K + + + K + C P Y +++
Sbjct: 467 ISPDKASYSSMLEG-LCSTGKVEEAQEVMDLMTK----QGCPPTSSHYALIIGGLCDVER 521
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
D+ + + + E P++YTY+ +++ K +++ +VL M C PD+ T+
Sbjct: 522 GDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTS 581
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
LID + K D Q FK++ S +P +N +I + ++ KA V Q M
Sbjct: 582 LIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKG 641
Query: 356 YTPSFITY 363
P TY
Sbjct: 642 CNPDAATY 649
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 90/224 (40%), Gaps = 2/224 (0%)
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
+ F+E P TY ++ + + G K + + + M + + PD+IT N ++ +Y
Sbjct: 10 SFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAY 69
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
+ D+ F+ M PT T+ +I + + +A + +M P
Sbjct: 70 CQIGDLDRALSHFRGKMWC--SPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDA 127
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
Y C+I + AR + + + V T +++ C EA L E
Sbjct: 128 AVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEK 187
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G+TPD+ Y L K N E V KLL+ M + G P+
Sbjct: 188 MKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPD 231
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 168/389 (43%), Gaps = 43/389 (11%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L E+ + D L+ E+F M + R + D +S LI V+ + G A+ F EM S
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSR-RGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS 426
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G PD +Y LI + AL+ AL +M C ++VTYN L + +
Sbjct: 427 GIVPDNVIYTILIDGFC----RNGALSDALKMRDEMLA-RGCFMDVVTYNTFLNGLCKKK 481
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ LF E+ E + PD YT+ ++ Y K+G + + ++ M KPD +T+N
Sbjct: 482 MFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYN 541
Query: 295 LLIDSYGK-------RQAFDKMEQ----------------------------VFKSLMHS 319
LID + K ++ +D M + + ++
Sbjct: 542 TLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEK 601
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
+P L T N++I Y ++ KA KM + P +Y +I Y N+ +A
Sbjct: 602 GIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKA 661
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+ +E+ K G + T N +L +C G EA+ + +G+ PD +TY L
Sbjct: 662 FILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLING 721
Query: 440 Y-TKANMKELVQKLLKRMEQNGIVPNKRF 467
+ ++ NMKE + M Q G+VP+ RF
Sbjct: 722 HVSQDNMKEAF-RFHDEMLQRGLVPDDRF 749
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 144/342 (42%), Gaps = 12/342 (3%)
Query: 149 SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQ 208
+KL+ + + G LA ++ E+ G + N ++ A K + + +
Sbjct: 226 NKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALC----KDRKFENVMFFLS 281
Query: 209 KMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
M+G + +IVTYN L+ A + V++ L + P + TYN ++ K
Sbjct: 282 DMEG-KGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKI 340
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
G + VL M P+ T+N L+ +R + +++F + P L +F
Sbjct: 341 GKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSF 400
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDEL 386
+S+I + +A F++M P + Y +I G+C N +S A ++ DE+
Sbjct: 401 SSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILID--GFCRNGALSDALKMRDEM 458
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
G M V T N L C + +AD+LF G+ PD T+ L + Y K
Sbjct: 459 LARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNM 518
Query: 447 ELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAK 488
+ L + M + + P+K + ++ F + + G AK
Sbjct: 519 DKALNLFEAMVRTNLKPDKVTYNTLIDGFCKA---GEMGRAK 557
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 124/261 (47%), Gaps = 5/261 (1%)
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
+Y+ L+ ++ +AK L + FQ ++ + +I N LL + VD
Sbjct: 189 IYDLLVRTYV----QAKKLREGSEAFQILR-RKGVSVSINACNKLLGGLVRTGWVDLAWE 243
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
++ E+ + ++YT N +++A K+ + + LS M+ DI+T+N LI++Y
Sbjct: 244 IYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYC 303
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
+ ++ Q+ S +P L T+N+++ K +A+ V +M + TP+
Sbjct: 304 REGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAA 363
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
TY ++ DN+ A+EIFDE+S+ G + + ++++ NG +A + F
Sbjct: 364 TYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREM 423
Query: 422 HNMGVTPDSSTYKLLYKAYTK 442
G+ PD+ Y +L + +
Sbjct: 424 ERSGIVPDNVIYTILIDGFCR 444
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 131/323 (40%), Gaps = 21/323 (6%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
M+ S+M G D YN LI A+ +A + L F +GME P ++TY
Sbjct: 276 VMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAF-QLLNSFSS-RGME---PGLLTY 330
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
N +L + D+ + E+ + L P+ TYN ++ + I E + + M
Sbjct: 331 NAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSR 390
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK------PTLPTFNSMIINYGK 337
PD+++F+ LI + ++++LMH +E P + +I + +
Sbjct: 391 RGVLPDLVSFSSLIGVLARNG------HLYQALMHFREMERSGIVPDNVIYTILIDGFCR 444
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKV 395
A + +M A +TY + G C + A +F+E+ + G
Sbjct: 445 NGALSDALKMRDEMLARGCFMDVVTYNTFLN--GLCKKKMFADADMLFNEMVERGMVPDF 502
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
T ++ YC +G +A LFE + PD TY L + KA ++L
Sbjct: 503 YTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDD 562
Query: 456 MEQNGIVPNKRFFLEALETFSSS 478
M + I+P+ + L F SS
Sbjct: 563 MIRKDIIPDHISYGTVLNGFCSS 585
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 106/247 (42%), Gaps = 41/247 (16%)
Query: 221 VTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSR 280
+ Y++L+R QA+ + + + F+ L ++ I N ++ + G + +
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK-PTLPTFNSMIINYGKAR 339
+ + ++ T N+++++ K + F+ + F S M K + T+N++I Y +
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENV-MFFLSDMEGKGVFADIVTYNTLINAYCREG 306
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGK-DMKVSTL 398
L +A + ++ P +TY I +YG C K+GK D L
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAI--LYGLC--------------KIGKYDRAKDVL 350
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK-LLYKAYTKANMKELVQKLLKRME 457
ML+ +G+TP+++TY LL + + N+ E Q++ M
Sbjct: 351 IEMLQ--------------------LGLTPNAATYNTLLVEICRRDNILE-AQEIFDEMS 389
Query: 458 QNGIVPN 464
+ G++P+
Sbjct: 390 RRGVLPD 396
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 156/332 (46%), Gaps = 32/332 (9%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHT--------------RDKAKA---------- 199
A+ L M+ SG +PD +YN L+ +++ RDK A
Sbjct: 37 ALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIK 96
Query: 200 -------LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILA 252
L FQ+MK PN TYN L++ + + L+ E+ A
Sbjct: 97 EYANTGRLQDCRKLFQEMKDKGE-SPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCA 155
Query: 253 PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
D++TYN + YGK G++++ME +L M + PD +T+N L+D Y K+ F K ++
Sbjct: 156 KDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEI 215
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGY 372
+ + + +P + T+N M+ + K + +A +F+ + + P+ +TY ++++YG
Sbjct: 216 LREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGR 275
Query: 373 CDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
+ A +++DE+ + G + + ++E+Y +G+ EA F++ G+ PD+
Sbjct: 276 HGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKI 335
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y L AY KA + L M + G VP+
Sbjct: 336 YTALMDAYGKAGRCREAELLYFEMTKEGFVPD 367
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 142/299 (47%), Gaps = 9/299 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI G+ + LF EM++ G P+ YNALI + + +AL +
Sbjct: 91 YTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQGY----GRKGLFKEALELY 146
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M G+ C ++ TYNI + + ++ + L E+ + PD TYN ++D Y K
Sbjct: 147 DEMDGV-GCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAK 205
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ +L M +P+I T+N+++ S K Q+ + Q+F++L P + T
Sbjct: 206 KSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVT 265
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+++M+ YG+ L +A ++ +M P I Y +I YG+ A F ++
Sbjct: 266 YSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMR 325
Query: 388 KLG--KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
K G D K+ T A+++AY G EA+LL+ G PD TY +L +A+ A
Sbjct: 326 KSGIVPDTKIYT--ALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAG 382
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 5/133 (3%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K + + + YS ++++ G+ G A L+ EM +GC P Y+ LI ++ H
Sbjct: 255 KSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMY 314
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+ALA FQ M+ P+ Y L+ A +A + L+ E+ + PD
Sbjct: 315 QEALA----CFQDMR-KSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGI 369
Query: 257 TYNGVMDAYGKNG 269
TY ++ A+ G
Sbjct: 370 TYGILVRAFANAG 382
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 164/379 (43%), Gaps = 54/379 (14%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++ LI + +G+ A+ LF +M G +P+ Y LI K + + +A
Sbjct: 114 DATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLC----KDRQVTEA 169
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
F +M KG+ PNIVTYN L+ + V L E+ +S + PD++T N V
Sbjct: 170 FNIFSEMITKGIS---PNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 226
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+DA K GM+ E V+ M +P+++T+N L+D + R D +VF +++H
Sbjct: 227 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 286
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
+ ++N++I Y K + KA Y+F++M+ + TP+ +TY +I + + A
Sbjct: 287 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 346
Query: 382 IFDELSKLGK-----------------------------------DMKVSTLNAMLEAYC 406
+F E+ G+ D + +L+ C
Sbjct: 347 LFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMC 406
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK- 465
G +A LF N + G+ P+ TY ++ K + KL M +NG PN
Sbjct: 407 RAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDC 466
Query: 466 ------RFFL---EALETF 475
R FL EAL T
Sbjct: 467 TYNLITRGFLRNNEALRTI 485
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 153/371 (41%), Gaps = 56/371 (15%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKA---LAKAL 204
++KL+ + K + L ++M + G PD N LI + H R A LAK L
Sbjct: 584 FTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLL 643
Query: 205 ---------GYFQKMKGMERCK-------PNIVTYNILLRACAQARNVDQVNALFKELHE 248
Y M G+ CK P+I TYN L+ A V L E+
Sbjct: 644 KLGFQPDVVTYGTLMNGL--CKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVN 701
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
S + P++ ++ V+DA K GMI V+ M +PD++T+ L+D + R D+
Sbjct: 702 SKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDE 761
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+VF +++H P + ++N +I Y + + KA + ++M+ +TY +I
Sbjct: 762 AVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIH 821
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN--------------GLPTEA 414
+ + A +F E+ G+ + T +L+ C N G +A
Sbjct: 822 GLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDA 881
Query: 415 DL---------------------LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
D+ LF N + G+ PD TY ++ K + + KL
Sbjct: 882 DILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLF 941
Query: 454 KRMEQNGIVPN 464
++M++N I N
Sbjct: 942 RKMDENDIWSN 952
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 5/217 (2%)
Query: 135 MQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR 194
M +R D Y+ L+ + + A+ +F M + GC P+ YN LI +
Sbjct: 733 MMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYC--- 789
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
+ + + KA+G ++M ++ + VTYN L+ + ALF E+ S PD
Sbjct: 790 -QIQRMDKAMGLLEQMS-LQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPD 847
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
+ TY ++D KN + E +L ++ + DI+ +N+ ID + + +F
Sbjct: 848 LVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFS 907
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
+L +P + T+N MI K L +A +F+KM
Sbjct: 908 NLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKM 944
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 119/276 (43%), Gaps = 5/276 (1%)
Query: 135 MQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR 194
M R + Y+ L+ + + +A+ +F M + C + YN LI +
Sbjct: 245 MMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYC--- 301
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
K +++ KA+ F++M E PN VTYN L+ + +LF E+ PD
Sbjct: 302 -KIQSVDKAMYLFEEMSRQEL-TPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPD 359
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
+ TY + D KN + + ++L ++ + PDI + ++D + + +F
Sbjct: 360 LVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFS 419
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
+L +P + T+N MI K L +A +F +M +P+ TY I + +
Sbjct: 420 NLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNN 479
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
R E+ +E+ G + VST ++ +GL
Sbjct: 480 EALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGL 515
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 110/249 (44%), Gaps = 16/249 (6%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
++S ++ + K+G +A + M G PD Y AL+ H + + +A+
Sbjct: 710 VFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSE----MDEAVKV 765
Query: 207 FQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
F M KG C PN+ +YNIL+ Q + +D+ L +++ L D TYN ++
Sbjct: 766 FDTMVHKG---CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHG 822
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
G ++ ++ M ++ PD++T+ +L+D K + + K++ S
Sbjct: 823 LCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDAD 882
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ +N I +A A +F +++ P TY I ++G C R + D
Sbjct: 883 ILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYN--IMIHGLC-----KRGLLD 935
Query: 385 ELSKLGKDM 393
E +KL + M
Sbjct: 936 EANKLFRKM 944
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 122/269 (45%), Gaps = 9/269 (3%)
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L +AL F +M ++ P+ V +N LL + A+ ++ + +L +++ + PD+YT
Sbjct: 26 LDEALSTFNRMLH-KQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLA 84
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
V+++ + S L+++ +PD TF LI + +F ++
Sbjct: 85 IVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE 144
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS-- 377
+P + T+ ++I K R +A +F +M +P+ +TY +I +G C
Sbjct: 145 GFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLI--HGLCKLCEWK 202
Query: 378 RAREIFDEL--SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+ +E+ SK+ D V TLN +++A C G+ EA + + + GV P+ TY
Sbjct: 203 HVTTLMNEMVDSKIMPD--VFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNA 260
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L + N ++ K+ M V N
Sbjct: 261 LMDGHCLRNEVDVAVKVFDTMVHKDCVAN 289
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 91/201 (45%), Gaps = 6/201 (2%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
++VF M + +A+ Y+ LI K AM+LF EM P+ YN LI
Sbjct: 275 VKVFDTMVHKDC-VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIH 333
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
H L A+ F +M + P++VTY L + R++D+ AL K +
Sbjct: 334 GLCH----VGRLQDAISLFHEMVARGQI-PDLVTYRTLSDYLCKNRHLDKAMALLKAIEG 388
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
S PDI Y ++D + G +++ + S + S +P++ T+N++I K+ +
Sbjct: 389 SNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAE 448
Query: 309 MEQVFKSLMHSKEKPTLPTFN 329
++F + + P T+N
Sbjct: 449 ASKLFSEMNKNGCSPNDCTYN 469
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 85/199 (42%), Gaps = 26/199 (13%)
Query: 100 LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG 159
+N Y K+ + LFEE+ + + +T Y+ LI + G
Sbjct: 297 INGYCKIQSVDKAMYLFEEMSRQE-----------------LTPNTVTYNTLIHGLCHVG 339
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALGYFQKMKGMERCK 217
+ + A+ LF EM G PD Y L R DKA AL KA+ +G
Sbjct: 340 RLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAI------EG-SNWD 392
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+I Y +L +A ++ LF L L P+++TYN ++ K G++ E +
Sbjct: 393 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 452
Query: 278 LSRMKSNQCKPDIITFNLL 296
S M N C P+ T+NL+
Sbjct: 453 FSEMNKNGCSPNDCTYNLI 471
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 145/365 (39%), Gaps = 30/365 (8%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + L K+ + + + + ++ W D IY+ ++ M + G+ A LFS + +
Sbjct: 366 LSDYLCKNRHLDKAMALLKAIEGSNWD-PDIQIYTTILDGMCRAGELEDARDLFSNLSSK 424
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G +P+ YN +I H K LA+A F +M C PN TYN++ R +
Sbjct: 425 GLQPNVWTYNIMI----HGLCKQGLLAEASKLFSEMNK-NGCSPNDCTYNLITRGFLRNN 479
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL------SRMKSNQCK- 287
+ L +E+ + D+ T ++ +G+ + ++ +L SR Q +
Sbjct: 480 EALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRS 539
Query: 288 -PDIITFNLLIDSYGKRQAFDKMEQV---FKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
P + + + + F+ ++ F ++H P+ F ++ + K +
Sbjct: 540 LPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYST 599
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
+ +M + P T +I + + + A + +L KLG V T ++
Sbjct: 600 VLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMN 659
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
C + T+ G++PD TY L A + V LL M + I+P
Sbjct: 660 GLC--KMITK-----------GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMP 706
Query: 464 NKRFF 468
N F
Sbjct: 707 NVVVF 711
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/396 (18%), Positives = 145/396 (36%), Gaps = 71/396 (17%)
Query: 133 RWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH 192
+ +Q W Y+ +I + K+G A LFSEM +GC P+ YN + L
Sbjct: 424 KGLQPNVW------TYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLR 477
Query: 193 TRDKAKA-------LAKAL-----------------GYFQKMKGMERCKPN--------- 219
+ + LA+ G Q +K + CKP+
Sbjct: 478 NNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQI-LCKPSSSSRPSGTQ 536
Query: 220 ---------IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
++N L +D + F + P + ++ + K
Sbjct: 537 MRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKH 596
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
+ S+ ++M S PD+ T N+LI+S+ + V L+ +P + T+ +
Sbjct: 597 YSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGT 656
Query: 331 MIINYGKARLQGKAEYVF----------------------QKMTAMKYTPSFITYECIIT 368
++ K +G + +F +M K P+ + + ++
Sbjct: 657 LMNGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVD 716
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
++ A ++ D + K G + V T A+++ +C+ EA +F+ + G P
Sbjct: 717 ALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVP 776
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ +Y +L Y + + LL++M G++ +
Sbjct: 777 NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIAD 812
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 152/328 (46%), Gaps = 7/328 (2%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
R + D YS +IA + K AM + + M +G PD YN++ LH +
Sbjct: 229 DRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI----LHGYCSS 284
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLR-ACAQARNVDQVNALFKELHESILAPDIY 256
+A+G +KM+ + +PN+VTY+ L+ C R+ + +F + + L PDI
Sbjct: 285 GQPKEAIGTLKKMRS-DGVEPNVVTYSSLMNYLCKNGRST-EARKIFDSMTKRGLEPDIA 342
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TY ++ Y G + EM ++L M N +PD FN+LI +Y K++ D+ VF +
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM 402
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
P + + ++I K+ A F++M TP+ I Y +I CD
Sbjct: 403 RQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKW 462
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A E+ E+ G + N++++++C G E++ LF+ +GV PD TY L
Sbjct: 463 DKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTL 522
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPN 464
A + KLL M G+ P+
Sbjct: 523 IDGCCLAGKMDEATKLLASMVSVGVKPD 550
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 155/325 (47%), Gaps = 5/325 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +++ LI K+ + AM +FS+MR G P+ Y +I K+ ++ A
Sbjct: 375 DHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLC----KSGSVDDA 430
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ YF++M E PNI+ Y L+ D+ L E+ + + + +N ++D
Sbjct: 431 MLYFEQMID-EGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIID 489
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
++ K G + E E + M KPDIIT+N LID D+ ++ S++ KP
Sbjct: 490 SHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKP 549
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T+ ++I Y + A +F++M + +P+ ITY I+ + + A+E++
Sbjct: 550 DIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELY 609
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
++K G +++ST N +L C N L EA +F+N + ++ T+ ++ A K
Sbjct: 610 VSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKC 669
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFF 468
+ + L NG+VP+ R +
Sbjct: 670 GRMDEAKDLFAAHSANGLVPDVRTY 694
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 145/334 (43%), Gaps = 7/334 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + G+ L + G R D + L+ + + A+ L
Sbjct: 95 YAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRM 154
Query: 208 QKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNAL--FKELHESILAPDIYTYNGVMDA 264
++ C P++ +YN LL+ C + R+ + + L + PD+ +YN V++
Sbjct: 155 TELG----CIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNG 210
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ K G + S M PD++T++ +I + K QA DK +V +++ + P
Sbjct: 211 FFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPD 270
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
T+NS++ Y + +A +KM + P+ +TY ++ + AR+IFD
Sbjct: 271 CMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFD 330
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
++K G + ++T +L+ Y G E L + G+ PD + +L AY K
Sbjct: 331 SMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQE 390
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ + +M Q+G+ PN + ++ S
Sbjct: 391 KVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKS 424
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 156/350 (44%), Gaps = 6/350 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ L K+ + +EV M K + D Y+ ++ GQ + A+ +MR+
Sbjct: 242 IIAALCKAQAMDKAMEVLNTMVKN-GVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSD 300
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P+ Y++L+ +L ++ K K +G+E P+I TY LL+ A
Sbjct: 301 GVEPNVVTYSSLMN-YLCKNGRSTEARKIFDSMTK-RGLE---PDIATYRTLLQGYATKG 355
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ +++AL + + + PD + +N ++ AY K + + V S+M+ + P+++ +
Sbjct: 356 ALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYG 415
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+ID K + D F+ ++ P + + S+I KAE + +M
Sbjct: 416 TVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDR 475
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ I + II + V + ++FD + ++G + T N +++ C+ G EA
Sbjct: 476 GICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEA 535
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L + ++GV PD TY L Y + + + L K M +G+ PN
Sbjct: 536 TKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPN 585
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 150/331 (45%), Gaps = 10/331 (3%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEM---RNSGCRPDPSVYNALITAHLHTRDKAK 198
I D Y+ L+ + + +++ A+ L M R G PD YN ++ D K
Sbjct: 160 IPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDK 219
Query: 199 ALAKALGYFQKM-KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
A + Y + + +G+ P++VTY+ ++ A +A+ +D+ + + ++ + PD T
Sbjct: 220 AYST---YHEMLDRGI---LPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 273
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN ++ Y +G KE L +M+S+ +P+++T++ L++ K + ++F S+
Sbjct: 274 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT 333
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
+P + T+ +++ Y + + M P + +I Y + V
Sbjct: 334 KRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVD 393
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
+A +F ++ + G + V +++ C +G +A L FE + G+TP+ Y L
Sbjct: 394 QAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 453
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+ + ++L+ M GI N FF
Sbjct: 454 HGLCTCDKWDKAEELILEMLDRGICLNTIFF 484
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 176/430 (40%), Gaps = 55/430 (12%)
Query: 84 RVLMRSFSDKEPLVRTLNKYVKVVRS-----EHCF-LLFEELGKSDKWLQCLEVFRWMQK 137
R L++ ++ K LV +VR+ H F +L K +K Q + VF M +
Sbjct: 345 RTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM-R 403
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--D 195
Q + Y +I V+ K G AM F +M + G P+ VY +LI D
Sbjct: 404 QHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWD 463
Query: 196 KAKALAKAL-----------------GYFQKMKGMER-----------CKPNIVTYNILL 227
KA+ L + + ++ + +E KP+I+TYN L+
Sbjct: 464 KAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLI 523
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
C A +D+ L + + PDI TY +++ Y + + + ++ M S+
Sbjct: 524 DGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVS 583
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P+IIT+N+++ + ++++ S+ S + L T+N ++ K L +A +
Sbjct: 584 PNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRM 643
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
FQ + T+ +I C + A+++F S G V T + M E
Sbjct: 644 FQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIE 703
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR--MEQNG----I 461
G E D LF + G + DS + +V+KLL+R + + G +
Sbjct: 704 QGSLEELDDLFLSMEENGCSADSRM------------LNSIVRKLLQRGDITRAGTYLFM 751
Query: 462 VPNKRFFLEA 471
+ K F LEA
Sbjct: 752 IDEKHFSLEA 761
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 125/311 (40%), Gaps = 45/311 (14%)
Query: 201 AKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
A A+ + +M G + P + TY IL+ C +A +D A + + D T+
Sbjct: 71 AAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITF 130
Query: 259 NGVMDAYGKNGMIKE-MESVLSRMKSNQCKPDIITFNLLI----DSYGKRQAFDKMEQVF 313
++ + + M+ VL RM C PD+ ++N L+ D ++A + + +
Sbjct: 131 TPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMA 190
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
P + ++N+++ + K KA + +M P +TY II
Sbjct: 191 DD-RGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKA 249
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP---------------------- 411
+ +A E+ + + K G T N++L YC +G P
Sbjct: 250 QAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTY 309
Query: 412 -------------TEADLLFENSHNMGVTPDSSTYKLLYKAY-TKANMKELVQKLLKRME 457
TEA +F++ G+ PD +TY+ L + Y TK + E+ LL M
Sbjct: 310 SSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEM-HALLDLMV 368
Query: 458 QNGIVPNKRFF 468
+NGI P+ F
Sbjct: 369 RNGIQPDHHVF 379
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 87/211 (41%), Gaps = 16/211 (7%)
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY-G 336
++R + + P + T+ +LI + D +++ + TF ++
Sbjct: 80 MARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCA 139
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM--- 393
R + V ++MT + P +Y ++ G CD +R++E + L + D
Sbjct: 140 DKRTSDAMDIVLRRMTELGCIPDVFSYNNLLK--GLCDE-NRSQEALELLHMMADDRGGG 196
Query: 394 ---KVSTLNAMLEAYCMNGLPTEADLLFENSHNM---GVTPDSSTYKLLYKAYTKANMKE 447
V + N +L + G ++D + H M G+ PD TY + A KA +
Sbjct: 197 SPPDVVSYNTVLNGFFKEG---DSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMD 253
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
++L M +NG++P+ + L + SS
Sbjct: 254 KAMEVLNTMVKNGVMPDCMTYNSILHGYCSS 284
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 152/328 (46%), Gaps = 7/328 (2%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
R + D YS +IA + K AM + + M +G PD YN++ LH +
Sbjct: 229 DRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI----LHGYCSS 284
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLR-ACAQARNVDQVNALFKELHESILAPDIY 256
+A+G +KM+ + +PN+VTY+ L+ C R+ + +F + + L PDI
Sbjct: 285 GQPKEAIGTLKKMRS-DGVEPNVVTYSSLMNYLCKNGRST-EARKIFDSMTKRGLEPDIA 342
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TY ++ Y G + EM ++L M N +PD FN+LI +Y K++ D+ VF +
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM 402
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
P + + ++I K+ A F++M TP+ I Y +I CD
Sbjct: 403 RQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKW 462
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A E+ E+ G + N++++++C G E++ LF+ +GV PD TY L
Sbjct: 463 DKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTL 522
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPN 464
A + KLL M G+ P+
Sbjct: 523 IDGCCLAGKMDEATKLLASMVSVGVKPD 550
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 155/325 (47%), Gaps = 5/325 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +++ LI K+ + AM +FS+MR G P+ Y +I K+ ++ A
Sbjct: 375 DHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLC----KSGSVDDA 430
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ YF++M E PNI+ Y L+ D+ L E+ + + + +N ++D
Sbjct: 431 MLYFEQMID-EGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIID 489
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
++ K G + E E + M KPDIIT+N LID D+ ++ S++ KP
Sbjct: 490 SHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKP 549
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T+ ++I Y + A +F++M + +P+ ITY I+ + + A+E++
Sbjct: 550 DIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELY 609
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
++K G +++ST N +L C N L EA +F+N + ++ T+ ++ A K
Sbjct: 610 VSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKC 669
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFF 468
+ + L NG+VP+ R +
Sbjct: 670 GRMDEAKDLFAAHSANGLVPDVRTY 694
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 145/334 (43%), Gaps = 7/334 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + G+ L + G R D + L+ + + A+ L
Sbjct: 95 YAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRM 154
Query: 208 QKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNAL--FKELHESILAPDIYTYNGVMDA 264
++ C P++ +YN LL+ C + R+ + + L + PD+ +YN V++
Sbjct: 155 TELG----CIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNG 210
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ K G + S M PD++T++ +I + K QA DK +V +++ + P
Sbjct: 211 FFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPD 270
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
T+NS++ Y + +A +KM + P+ +TY ++ + AR+IFD
Sbjct: 271 CMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFD 330
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
++K G + ++T +L+ Y G E L + G+ PD + +L AY K
Sbjct: 331 SMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQE 390
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ + +M Q+G+ PN + ++ S
Sbjct: 391 KVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKS 424
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 156/350 (44%), Gaps = 6/350 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ L K+ + +EV M K + D Y+ ++ GQ + A+ +MR+
Sbjct: 242 IIAALCKAQAMDKAMEVLNTMVKN-GVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSD 300
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P+ Y++L+ +L ++ K K +G+E P+I TY LL+ A
Sbjct: 301 GVEPNVVTYSSLMN-YLCKNGRSTEARKIFDSMTK-RGLE---PDIATYRTLLQGYATKG 355
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ +++AL + + + PD + +N ++ AY K + + V S+M+ + P+++ +
Sbjct: 356 ALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYG 415
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+ID K + D F+ ++ P + + S+I KAE + +M
Sbjct: 416 TVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDR 475
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ I + II + V + ++FD + ++G + T N +++ C+ G EA
Sbjct: 476 GICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEA 535
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L + ++GV PD TY L Y + + + L K M +G+ PN
Sbjct: 536 TKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPN 585
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 150/331 (45%), Gaps = 10/331 (3%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEM---RNSGCRPDPSVYNALITAHLHTRDKAK 198
I D Y+ L+ + + +++ A+ L M R G PD YN ++ D K
Sbjct: 160 IPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDK 219
Query: 199 ALAKALGYFQKM-KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
A + Y + + +G+ P++VTY+ ++ A +A+ +D+ + + ++ + PD T
Sbjct: 220 AYST---YHEMLDRGI---LPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 273
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN ++ Y +G KE L +M+S+ +P+++T++ L++ K + ++F S+
Sbjct: 274 YNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMT 333
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
+P + T+ +++ Y + + M P + +I Y + V
Sbjct: 334 KRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVD 393
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
+A +F ++ + G + V +++ C +G +A L FE + G+TP+ Y L
Sbjct: 394 QAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 453
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+ + ++L+ M GI N FF
Sbjct: 454 HGLCTCDKWDKAEELILEMLDRGICLNTIFF 484
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 176/430 (40%), Gaps = 55/430 (12%)
Query: 84 RVLMRSFSDKEPLVRTLNKYVKVVRS-----EHCF-LLFEELGKSDKWLQCLEVFRWMQK 137
R L++ ++ K LV +VR+ H F +L K +K Q + VF M +
Sbjct: 345 RTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM-R 403
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--D 195
Q + Y +I V+ K G AM F +M + G P+ VY +LI D
Sbjct: 404 QHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWD 463
Query: 196 KAKALAKAL-----------------GYFQKMKGMER-----------CKPNIVTYNILL 227
KA+ L + + ++ + +E KP+I+TYN L+
Sbjct: 464 KAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLI 523
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
C A +D+ L + + PDI TY +++ Y + + + ++ M S+
Sbjct: 524 DGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVS 583
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P+IIT+N+++ + ++++ S+ S + L T+N ++ K L +A +
Sbjct: 584 PNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRM 643
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
FQ + T+ +I C + A+++F S G V T + M E
Sbjct: 644 FQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIE 703
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR--MEQNG----I 461
G E D LF + G + DS + +V+KLL+R + + G +
Sbjct: 704 QGSLEELDDLFLSMEENGCSADSRM------------LNSIVRKLLQRGDITRAGTYLFM 751
Query: 462 VPNKRFFLEA 471
+ K F LEA
Sbjct: 752 IDEKHFSLEA 761
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 125/311 (40%), Gaps = 45/311 (14%)
Query: 201 AKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
A A+ + +M G + P + TY IL+ C +A +D A + + D T+
Sbjct: 71 AAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITF 130
Query: 259 NGVMDAYGKNGMIKE-MESVLSRMKSNQCKPDIITFNLLI----DSYGKRQAFDKMEQVF 313
++ + + M+ VL RM C PD+ ++N L+ D ++A + + +
Sbjct: 131 TPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMA 190
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
P + ++N+++ + K KA + +M P +TY II
Sbjct: 191 DD-RGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKA 249
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP---------------------- 411
+ +A E+ + + K G T N++L YC +G P
Sbjct: 250 QAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTY 309
Query: 412 -------------TEADLLFENSHNMGVTPDSSTYKLLYKAY-TKANMKELVQKLLKRME 457
TEA +F++ G+ PD +TY+ L + Y TK + E+ LL M
Sbjct: 310 SSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEM-HALLDLMV 368
Query: 458 QNGIVPNKRFF 468
+NGI P+ F
Sbjct: 369 RNGIQPDHHVF 379
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 87/211 (41%), Gaps = 16/211 (7%)
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY-G 336
++R + + P + T+ +LI + D +++ + TF ++
Sbjct: 80 MARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCA 139
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM--- 393
R + V ++MT + P +Y ++ G CD +R++E + L + D
Sbjct: 140 DKRTSDAMDIVLRRMTELGCIPDVFSYNNLLK--GLCDE-NRSQEALELLHMMADDRGGG 196
Query: 394 ---KVSTLNAMLEAYCMNGLPTEADLLFENSHNM---GVTPDSSTYKLLYKAYTKANMKE 447
V + N +L + G ++D + H M G+ PD TY + A KA +
Sbjct: 197 SPPDVVSYNTVLNGFFKEG---DSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMD 253
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
++L M +NG++P+ + L + SS
Sbjct: 254 KAMEVLNTMVKNGVMPDCMTYNSILHGYCSS 284
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 168/389 (43%), Gaps = 43/389 (11%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L E+ + D L+ E+F M + R + D +S LI V+ + G A+ F EM S
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSR-RGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS 426
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G PD +Y LI + AL+ AL +M C ++VTYN L + +
Sbjct: 427 GIVPDNVIYTILIDGFC----RNGALSDALKMRDEMLA-RGCFMDVVTYNTFLNGLCKKK 481
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ LF E+ E + PD YT+ ++ Y K+G + + ++ M KPD +T+N
Sbjct: 482 MFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYN 541
Query: 295 LLIDSYGK-------RQAFDKMEQ----------------------------VFKSLMHS 319
LID + K ++ +D M + + ++
Sbjct: 542 TLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEK 601
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
+P L T N++I Y ++ KA KM + P +Y +I Y N+ +A
Sbjct: 602 GIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKA 661
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+ +E+ K G + T N +L +C G EA+ + +G+ PD +TY L
Sbjct: 662 FILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLING 721
Query: 440 Y-TKANMKELVQKLLKRMEQNGIVPNKRF 467
+ ++ NMKE + M Q G+VP+ RF
Sbjct: 722 HVSQDNMKEAF-RFHDEMLQRGLVPDDRF 749
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 144/342 (42%), Gaps = 12/342 (3%)
Query: 149 SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQ 208
+KL+ + + G LA ++ E+ G + N ++ A K + + +
Sbjct: 226 NKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALC----KDRKFENVMFFLS 281
Query: 209 KMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
M+G + +IVTYN L+ A + V++ L + P + TYN ++ K
Sbjct: 282 DMEG-KGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKI 340
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
G + VL M P+ T+N L+ +R + +++F + P L +F
Sbjct: 341 GKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSF 400
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDEL 386
+S+I + +A F++M P + Y +I G+C N +S A ++ DE+
Sbjct: 401 SSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILID--GFCRNGALSDALKMRDEM 458
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
G M V T N L C + +AD+LF G+ PD T+ L + Y K
Sbjct: 459 LARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNM 518
Query: 447 ELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAK 488
+ L + M + + P+K + ++ F + + G AK
Sbjct: 519 DKALNLFEAMVRTNLKPDKVTYNTLIDGFCKA---GEMGRAK 557
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 124/261 (47%), Gaps = 5/261 (1%)
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
+Y+ L+ ++ +AK L + FQ ++ + +I N LL + VD
Sbjct: 189 IYDLLVRTYV----QAKKLREGSEAFQILR-RKGVSVSINACNKLLGGLVRTGWVDLAWE 243
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
++ E+ + ++YT N +++A K+ + + LS M+ DI+T+N LI++Y
Sbjct: 244 IYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYC 303
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
+ ++ Q+ S +P L T+N+++ K +A+ V +M + TP+
Sbjct: 304 REGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAA 363
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
TY ++ DN+ A+EIFDE+S+ G + + ++++ NG +A + F
Sbjct: 364 TYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREM 423
Query: 422 HNMGVTPDSSTYKLLYKAYTK 442
G+ PD+ Y +L + +
Sbjct: 424 ERSGIVPDNVIYTILIDGFCR 444
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 131/323 (40%), Gaps = 21/323 (6%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
M+ S+M G D YN LI A+ +A + L F +GME P ++TY
Sbjct: 276 VMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAF-QLLNSFSS-RGME---PGLLTY 330
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
N +L + D+ + E+ + L P+ TYN ++ + I E + + M
Sbjct: 331 NAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSR 390
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK------PTLPTFNSMIINYGK 337
PD+++F+ LI + ++++LMH +E P + +I + +
Sbjct: 391 RGVLPDLVSFSSLIGVLARNG------HLYQALMHFREMERSGIVPDNVIYTILIDGFCR 444
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKV 395
A + +M A +TY + G C + A +F+E+ + G
Sbjct: 445 NGALSDALKMRDEMLARGCFMDVVTYNTFLN--GLCKKKMFADADMLFNEMVERGMVPDF 502
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
T ++ YC +G +A LFE + PD TY L + KA ++L
Sbjct: 503 YTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDD 562
Query: 456 MEQNGIVPNKRFFLEALETFSSS 478
M + I+P+ + L F SS
Sbjct: 563 MIRKDIIPDHISYGTVLNGFCSS 585
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 106/247 (42%), Gaps = 41/247 (16%)
Query: 221 VTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSR 280
+ Y++L+R QA+ + + + F+ L ++ I N ++ + G + +
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK-PTLPTFNSMIINYGKAR 339
+ + ++ T N+++++ K + F+ + F S M K + T+N++I Y +
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENV-MFFLSDMEGKGVFADIVTYNTLINAYCREG 306
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGK-DMKVSTL 398
L +A + ++ P +TY I +YG C K+GK D L
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAI--LYGLC--------------KIGKYDRAKDVL 350
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK-LLYKAYTKANMKELVQKLLKRME 457
ML+ +G+TP+++TY LL + + N+ E Q++ M
Sbjct: 351 IEMLQ--------------------LGLTPNAATYNTLLVEICRRDNILE-AQEIFDEMS 389
Query: 458 QNGIVPN 464
+ G++P+
Sbjct: 390 RRGVLPD 396
>gi|297844848|ref|XP_002890305.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336147|gb|EFH66564.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 860
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 156/328 (47%), Gaps = 5/328 (1%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L + + + L F W+++Q + D Y+ ++ +G+ Q L EM GC+P
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQP 397
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
+ YN LI H+ +A L +A+ F +M+ CKP+ VTY L+ A+A +D
Sbjct: 398 NTVTYNRLI----HSYGRANYLNEAMNVFNQMQ-EAGCKPDRVTYCTLIDIHAKAGFLDI 452
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+++ + L+PD +TY+ +++ GK G + + M C P+++T+N+++D
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
+ K + + ++++ + ++ +P T++ ++ G +AE VF +M + P
Sbjct: 513 LHAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
Y ++ ++G NV +A + + + G V T N++L + EA L
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELL 632
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMK 446
+N +G+ P TY LL T K
Sbjct: 633 QNMLALGLRPSLQTYTLLLSCCTDGRSK 660
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 121/275 (44%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
ALG+F +K K + TY ++ +A+ +N L E+ P+ TYN
Sbjct: 345 GNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNR 404
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ +YG+ + E +V ++M+ CKPD +T+ LID + K D +++ +
Sbjct: 405 LIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG 464
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P T++ +I GKA A +F +M TP+ +TY ++ ++ N A
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSAL 524
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+++ ++ G + T + ++E G EA+ +F PD Y LL +
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLW 584
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
KA E + + M G++PN L TF
Sbjct: 585 GKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTF 619
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 149/317 (47%), Gaps = 5/317 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ LI + K G+ A+ LF +M GC+PD YN +I K A A G
Sbjct: 166 FTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLC----KIGETAAAAGLL 221
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+KM+ C+PN+VTY+ L+ + + R V++ +F + ++PDI+TY ++ K
Sbjct: 222 KKMEE-AGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCK 280
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
KE ++L+ M S PDI+TFN+L+D++ K + V K++ +P + T
Sbjct: 281 FSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVT 340
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
++S++ Y +A +F M P+ +Y +I Y + A ++F+E+
Sbjct: 341 YSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMI 400
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G + N ++ +C G EA LF N G PD TY +L + K
Sbjct: 401 HQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLG 460
Query: 448 LVQKLLKRMEQNGIVPN 464
+L + M+ + PN
Sbjct: 461 KAFRLFRAMQSTYLKPN 477
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 169/356 (47%), Gaps = 10/356 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L K ++ Q +E+F M + D Y+ +I + K G+T A L +M +
Sbjct: 169 LINGLCKVGEFAQAVELFDDMVAKGCQ-PDVYTYNTIINGLCKIGETAAAAGLLKKMEEA 227
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC+P+ Y+ LI + RD+ A + + K KG+ P+I TY L++ +
Sbjct: 228 GCQPNMVTYSTLIDSL--CRDRLVNEALDIFSYMKAKGIS---PDIFTYTSLIQGLCKFS 282
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ +AL E+ + PDI T+N ++D + K G + E VL M +P+++T++
Sbjct: 283 RWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYS 342
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
L+ Y + ++F ++ KP + ++N +I Y KA+ +A +F +M
Sbjct: 343 SLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQ 402
Query: 355 KYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
TP+ ++Y +I +G+C + A+++F + G + T + +L+ +C G
Sbjct: 403 GLTPNNVSYNTLI--HGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLG 460
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+A LF + + P+ Y +L A K+ + +KL + G+ P+ + +
Sbjct: 461 KAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLY 516
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 152/340 (44%), Gaps = 6/340 (1%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ L++F +M K + D Y+ LI + K + + A L +EM + PD +N L
Sbjct: 251 EALDIFSYM-KAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVL 309
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
+ T K +++ALG + M M +PN+VTY+ L+ + +V + LF +
Sbjct: 310 V----DTFCKEGKVSEALGVLKTMTEMG-VEPNVVTYSSLMYGYSLWTDVVEARKLFHVM 364
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
P+I++YN +++ Y K I E + + M P+ +++N LI + +
Sbjct: 365 ITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKL 424
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ + +F+++ + P L T++ ++ + K GKA +F+ M + P+ + Y +
Sbjct: 425 REAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTIL 484
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
+ N AR++F EL G V ++ C GL EA F N G
Sbjct: 485 VHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGC 544
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
PD +Y ++ + + + L+ M G + + R
Sbjct: 545 PPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADVR 584
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 114/248 (45%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+P IVT+ L+ + Q LF ++ PD+YTYN +++ K G
Sbjct: 160 QPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAG 219
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+L +M+ C+P+++T++ LIDS + + ++ +F + P + T+ S+I
Sbjct: 220 LLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLC 279
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
K +A + +MT++ P +T+ ++ + VS A + ++++G + V
Sbjct: 280 KFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVV 339
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
T ++++ Y + EA LF G P+ +Y +L Y KA + +L M
Sbjct: 340 TYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEM 399
Query: 457 EQNGIVPN 464
G+ PN
Sbjct: 400 IHQGLTPN 407
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 114/250 (45%), Gaps = 6/250 (2%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
PNI T +I + Q + VD ++ ++ + L P I T+ +++ K G + +
Sbjct: 126 PNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVEL 185
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
M + C+PD+ T+N +I+ K + K + + +P + T++++I + +
Sbjct: 186 FDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCR 245
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE---IFDELSKLGKDMK 394
RL +A +F M A +P TY +I G C SR +E + +E++ L
Sbjct: 246 DRLVNEALDIFSYMKAKGISPDIFTYTSLIQ--GLC-KFSRWKEASALLNEMTSLNIMPD 302
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
+ T N +++ +C G +EA + + MGV P+ TY L Y+ +KL
Sbjct: 303 IVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFH 362
Query: 455 RMEQNGIVPN 464
M G PN
Sbjct: 363 VMITKGCKPN 372
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 103/243 (42%), Gaps = 1/243 (0%)
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSR-MKSNQCKPDIIT 292
RN+D A F + P I + ++ A K G ++ LS+ M+ P+I T
Sbjct: 71 RNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYT 130
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
++ ++ + + Q D V ++ +PT+ TF ++I K +A +F M
Sbjct: 131 LSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMV 190
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
A P TY II + A + ++ + G + T + ++++ C + L
Sbjct: 191 AKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVN 250
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
EA +F G++PD TY L + K + + LL M I+P+ F +
Sbjct: 251 EALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLV 310
Query: 473 ETF 475
+TF
Sbjct: 311 DTF 313
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 154/336 (45%), Gaps = 6/336 (1%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
+E + M+ R + + Y+ LI K G T+ A+ ++ M SG RPD +N L+
Sbjct: 74 VEALKRMEGHRCALTASA-YNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMN 132
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
A KAK + F++M+ + C PN++TY+IL+ A + V++ +F ++
Sbjct: 133 AF----KKAKRVDSVWKLFEEMQN-QNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKS 187
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
P+I+TY ++D GK+G + + + M S + +N LI G+ D
Sbjct: 188 RGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADA 247
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
++F+ ++ +P TF S++ G A +A +FQ+ + Y +I
Sbjct: 248 AAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLID 307
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
+ A EIF EL + G V T NA+++ C +G +A +L + G TP
Sbjct: 308 TLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTP 367
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
D + Y L K+ E +LL M+ G P+
Sbjct: 368 DVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPD 403
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 170/368 (46%), Gaps = 8/368 (2%)
Query: 97 VRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMG 156
VRT V VR+ C L E LG + ++ + EV ++K R YI I+ +L
Sbjct: 9 VRTQRGGVPSVRA--CTTLVEMLGIARRFNEAEEVLAEVEKSR-YILQPRIFIELARGYA 65
Query: 157 KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERC 216
G ++ M C S YN+LI A + KA KAL ++ M G
Sbjct: 66 SAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFV----KAGYTQKALAVYRVM-GQSGL 120
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+P+ T+N+L+ A +A+ VD V LF+E+ +P++ TY+ ++DA K G +++
Sbjct: 121 RPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALK 180
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
V MKS C+P+I T+ +ID GK DK +F+ + T +NS+I G
Sbjct: 181 VFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLG 240
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
++ A +F++M + P +T+ ++ G S AR IF E +G + V+
Sbjct: 241 RSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVN 300
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
N +++ C + EA +F G+ PD T+ L K+ LL M
Sbjct: 301 LYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDM 360
Query: 457 EQNGIVPN 464
++ G P+
Sbjct: 361 KRAGCTPD 368
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 152/338 (44%), Gaps = 38/338 (11%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ + LGKS + +F M + +A +Y+ LI +G+ G+ A LF EM +
Sbjct: 200 MIDGLGKSGHVDKAFFLFEEMTSE-GLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSK 258
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G +PD + +L+ + A ++A FQ+ + + C ++ YN+L+ +++
Sbjct: 259 GLQPDHVTFTSLV----YGLGVAGRASEARRIFQEARDVG-CALDVNLYNVLIDTLCKSK 313
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+D+ +F EL E L PD+YT+N +MD K+G I + +L MK C PD+ +N
Sbjct: 314 RLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYN 373
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
LID K ++ Q+ + +P + T+N++I K A +F++++A
Sbjct: 374 TLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAK 433
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ + +TY I+ G C R DE KL MK T++ +++
Sbjct: 434 GFANT-VTYNTILN--GLC-MAGRV----DEAYKLFNGMKQETVDGVID----------- 474
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
PD TY L +A + EL L
Sbjct: 475 -------------PDFVTYTTLLNGARQAGLSELANSL 499
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 77/211 (36%), Gaps = 35/211 (16%)
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA----------RLQG 342
F L Y +K + K + + T +NS+I + KA R+ G
Sbjct: 57 FIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMG 116
Query: 343 -------------------KAEYV------FQKMTAMKYTPSFITYECIITMYGYCDNVS 377
KA+ V F++M +P+ ITY +I C V
Sbjct: 117 QSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVE 176
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
+A ++F ++ G + T +M++ +G +A LFE + G+ Y L
Sbjct: 177 KALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLI 236
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
++ + KL + M G+ P+ F
Sbjct: 237 HGLGRSGRADAAAKLFREMLSKGLQPDHVTF 267
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 195/427 (45%), Gaps = 32/427 (7%)
Query: 63 WTRPRSKRGRKSEELESKELVRVLMRSFSDKEP----LVRTLNKYVKVVRSEH------- 111
WT S + + ++ E R + S S +P L+R L + ++ ++E
Sbjct: 308 WTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAG 367
Query: 112 ---------CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTR 162
C + +EL K+ + L + M K R Y D +S LI + K + +
Sbjct: 368 RNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIK-RGYCPDMATHSMLINELCKADKIQ 426
Query: 163 LAMWLFSEM--RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNI 220
A M + S YN+L L++ KAK + +A F M P++
Sbjct: 427 EAQEFLQGMDRKISSRSSSCFSYNSL----LNSLCKAKKVHQAFAIFSTMVSERSFVPDV 482
Query: 221 VTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSR 280
V+Y+IL+ + + + L+K++ + P++ TYN ++ + G I + + V
Sbjct: 483 VSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEE 542
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
M + C PD+IT++ LI + + D+ ++F++++ +P T+N ++ K
Sbjct: 543 MVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESK 602
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTL 398
+A +F+KM P +TY + +YG+C+ + +A E+FDE+ G D V
Sbjct: 603 PDEAHELFRKMVERGCDPDRVTYTTL--LYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAY 660
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N +L+ + G P EA LF+ + PD+ ++ ++ +KA + ++ +RMEQ
Sbjct: 661 NCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQ 720
Query: 459 N-GIVPN 464
+ G P+
Sbjct: 721 DHGCSPD 727
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 104/219 (47%), Gaps = 10/219 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS LI + A LF M + GCRP+ YN L LH K +A
Sbjct: 551 DVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCL----LHGLCKESKPDEA 606
Query: 204 LGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
F+KM +ER C P+ VTY LL ++Q +F E+ PD+ YN ++
Sbjct: 607 HELFRKM--VERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLL 664
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE- 321
+ + G E + + M S QCKPD ++ N++ID K + D +VF+ +
Sbjct: 665 KGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGC 724
Query: 322 KPTLPTFNSMIINY-GKARLQGKAEYVFQKMTAMKYTPS 359
P L T+NS+I G+ RL +A VF+++ +K +P
Sbjct: 725 SPDLVTYNSLIFGLCGEQRLS-EAMKVFKEIDRLKLSPD 762
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 86/188 (45%), Gaps = 10/188 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + K+ + A LF +M GC PD Y L+ + + +A+ F
Sbjct: 590 YNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNV----GKIEQAVEVF 645
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M KG + P++V YN LL+ +A + LF+ + PD ++N ++D
Sbjct: 646 DEMVSKGHD---PDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGL 702
Query: 266 GKNGMIKEMESVLSRMKSNQ-CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
K + + V RM+ + C PD++T+N LI Q + +VFK + K P
Sbjct: 703 SKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPD 762
Query: 325 LPTFNSMI 332
FN ++
Sbjct: 763 PHAFNVLL 770
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/369 (19%), Positives = 144/369 (39%), Gaps = 72/369 (19%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAH--LHTRDKA-----------KALAKALGYFQKMKGM 213
LF M SGC+PD ++Y+ ++ AH L D+A KA + + + G+
Sbjct: 256 LFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGL 315
Query: 214 ERCKPNIV-------------------TYNILLRACAQARNVDQVNALFKELHESILAPD 254
CK + Y++L+R ++ +D+ E+ + P
Sbjct: 316 --CKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPS 373
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV-- 312
T + V+ K G + S+L M PD+ T ++LI+ K + ++
Sbjct: 374 SGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQ 433
Query: 313 ---------------FKSLMHSKEK---------------------PTLPTFNSMIINYG 336
+ SL++S K P + +++ +I +
Sbjct: 434 GMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFC 493
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
K G+AE ++++M + P+ TY + ++ A+ +++E+ G V
Sbjct: 494 KIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVI 553
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
T + ++ + + +A LFE + G P++ TY L K + + +L ++M
Sbjct: 554 TYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKM 613
Query: 457 EQNGIVPNK 465
+ G P++
Sbjct: 614 VERGCDPDR 622
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 86/186 (46%), Gaps = 7/186 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L K K + E+FR M +R D Y+ L+ G+ A+ +F EM +
Sbjct: 593 LLHGLCKESKPDEAHELFRKMV-ERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSK 651
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G PD YN L+ +A +A FQ M +CKP+ V++NI++ ++A+
Sbjct: 652 GHDPDVVAYNCLLKGFF----RAGKPGEAKQLFQVMVS-RQCKPDTVSHNIMIDGLSKAK 706
Query: 235 NVDQVNALFKELHESI-LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+D +F+ + + +PD+ TYN ++ + E V + + PD F
Sbjct: 707 RLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAF 766
Query: 294 NLLIDS 299
N+L+++
Sbjct: 767 NVLLEA 772
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 6/152 (3%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
K Q +EVF M + + D Y+ L+ + G+ A LF M + C+PD +
Sbjct: 637 KIEQAVEVFDEMV-SKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSH 695
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
N +I KAK L A+ F++M+ C P++VTYN L+ + + + +F
Sbjct: 696 NIMIDG----LSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVF 751
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
KE+ L+PD + +N +++A K G++ + E
Sbjct: 752 KEIDRLKLSPDPHAFNVLLEAI-KCGIVYQFE 782
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/330 (20%), Positives = 137/330 (41%), Gaps = 40/330 (12%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ F ++ + D YN L+ + RD L +A F+KM + PN TY
Sbjct: 113 ALTFFRWLQARNFKHDVFTYNCLLDKLIRHRD----LKQAGQVFEKMVA-QGVVPNGFTY 167
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
+L+++ RN D+ F E+ + P Y V + G E V R
Sbjct: 168 AVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLE 227
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+ +++ L+ ++ + + ++F++++ S KP ++ M++ + K +
Sbjct: 228 KRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDE 287
Query: 344 AEYVFQKMTAMKYTP-------SFITYEC----IITMYGYC----DNVSRAREIFDELSK 388
A +F +M P +F++ C I + C +++S ++ ++D L +
Sbjct: 288 AFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIR 347
Query: 389 L------------------GKDMKVS--TLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
L G++++ S T +++++ C G A L E G P
Sbjct: 348 LLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCP 407
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
D +T+ +L KA+ + Q+ L+ M++
Sbjct: 408 DMATHSMLINELCKADKIQEAQEFLQGMDR 437
>gi|255574497|ref|XP_002528160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532417|gb|EEF34211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 569
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 151/348 (43%), Gaps = 40/348 (11%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ I + K G + A+ +F M+ C+P Y LI H KA AL
Sbjct: 220 VYNAYIDGLMKAGNPQRAVEIFQRMKRDCCQPSTETYTLLINLH----GKASQSYMALKL 275
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F +M+ ++CKPNI TY L+ A A+ ++ +F++L E PD+Y YN +M+AY
Sbjct: 276 FNEMRS-QKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYS 334
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK-------RQAFDKM---------- 309
+ G + S M+ C+PD ++N+++D+YG+ + F++M
Sbjct: 335 RAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLGITPTMK 394
Query: 310 ------------------EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
E + L S +P NSM+ YG+ GK E V M
Sbjct: 395 SHMLLLSAYSKAGDVAKCEDIVNELHESGLEPDTFVLNSMLNLYGRLGQFGKMEEVLTAM 454
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+ Y TY +I +YG + +F L+ V T + L AY L
Sbjct: 455 ESGPYATDISTYNILINIYGRAGFFEKMEGLFQSLAAKNLKPDVVTWTSRLGAYSRKKLY 514
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
T+ +FE + G PD T K+L + + + E V +++ M +N
Sbjct: 515 TKCLEIFEEMIDAGCHPDGRTAKVLLSSCSSEDQIEQVTTVIRTMHKN 562
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 146/302 (48%), Gaps = 8/302 (2%)
Query: 163 LAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVT 222
+ W+ + S + D ++N +I A+ R +A+ YF+ ++ RC P T
Sbjct: 134 ICQWI---LYRSSFQSDVMIFNLVIDAY--GRKSLYKMAETT-YFELIEA--RCIPTEDT 185
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y +LL+A + +++ A+F E+ + L P YN +D K G + + RMK
Sbjct: 186 YALLLKAYCTSGLLEKAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEIFQRMK 245
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
+ C+P T+ LLI+ +GK ++F + K KP + T+ +++ + + L
Sbjct: 246 RDCCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCE 305
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
KAE +F+++ + P Y ++ Y A EIF + +G + ++ N M+
Sbjct: 306 KAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMV 365
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+AY GL +A +FE +G+TP ++ LL AY+KA + ++ + ++G+
Sbjct: 366 DAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNELHESGLE 425
Query: 463 PN 464
P+
Sbjct: 426 PD 427
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 152/336 (45%), Gaps = 9/336 (2%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
KW L + +W+ + + +D I++ +I G+K ++A + E+ + C P Y
Sbjct: 127 KWDLILLICQWILYRSSFQSDVMIFNLVIDAYGRKSLYKMAETTYFELIEARCIPTEDTY 186
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNA 241
L+ A+ + L KA F +M+ G+ P+ + YN + +A N +
Sbjct: 187 ALLLKAYC----TSGLLEKAEAIFAEMRKYGL---PPSAIVYNAYIDGLMKAGNPQRAVE 239
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
+F+ + P TY +++ +GK + + M+S +CKP+I T+ L++++
Sbjct: 240 IFQRMKRDCCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFA 299
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
+ +K E++F+ L +P + +N+++ Y +A A +F M M P
Sbjct: 300 REGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRA 359
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
+Y ++ YG A+ +F+E+ +LG + + +L AY G + + +
Sbjct: 360 SYNIMVDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNEL 419
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
H G+ PD+ + Y + ++++L ME
Sbjct: 420 HESGLEPDTFVLNSMLNLYGRLGQFGKMEEVLTAME 455
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 126/260 (48%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
+++ +N+++ A + + EL E+ P TY ++ AY +G++++ E++
Sbjct: 147 DVMIFNLVIDAYGRKSLYKMAETTYFELIEARCIPTEDTYALLLKAYCTSGLLEKAEAIF 206
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
+ M+ P I +N ID K + ++F+ + +P+ T+ +I +GKA
Sbjct: 207 AEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEIFQRMKRDCCQPSTETYTLLINLHGKA 266
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
A +F +M + K P+ TY ++ + +A EIF++L + G + V
Sbjct: 267 SQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYAY 326
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
NA++EAY G P A +F +MG PD ++Y ++ AY + + E Q + + M++
Sbjct: 327 NALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRGGLHEDAQAVFEEMKR 386
Query: 459 NGIVPNKRFFLEALETFSSS 478
GI P + + L +S +
Sbjct: 387 LGITPTMKSHMLLLSAYSKA 406
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 18/183 (9%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
L++ K G + +E+ SG PD V N+++ +L+ R LG F KM
Sbjct: 399 LLSAYSKAGDVAKCEDIVNELHESGLEPDTFVLNSML--NLYGR---------LGQFGKM 447
Query: 211 K----GMERC--KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
+ ME +I TYNIL+ +A +++ LF+ L L PD+ T+ + A
Sbjct: 448 EEVLTAMESGPYATDISTYNILINIYGRAGFFEKMEGLFQSLAAKNLKPDVVTWTSRLGA 507
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
Y + + + + M C PD T +L+ S +++ V ++ MH +
Sbjct: 508 YSRKKLYTKCLEIFEEMIDAGCHPDGRTAKVLLSSCSSEDQIEQVTTVIRT-MHKNMETV 566
Query: 325 LPT 327
LP
Sbjct: 567 LPV 569
>gi|225456631|ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
[Vitis vinifera]
Length = 875
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 158/315 (50%), Gaps = 5/315 (1%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L F W+++Q + D Y+ ++ ++G+ Q L +EM GC+P+ YN LI
Sbjct: 363 LGFFYWLKRQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLI- 421
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
H+ +A L +A+ F +M+ C+P+ VTY L+ A+A +D +++++ E
Sbjct: 422 ---HSYGRANYLNEAVSVFDRMQ-EAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQE 477
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
+ L+PD +TY+ +++ GK G + + M C P+++T+N++I K + +
Sbjct: 478 AHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPT 537
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
++++ + ++ +P T++ ++ G +AE +F +M + P Y ++
Sbjct: 538 ALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVD 597
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
++G NV ++ E + + G V T N++L A+ ++A L ++ +G+ P
Sbjct: 598 LWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQP 657
Query: 429 DSSTYKLLYKAYTKA 443
TY LL T+A
Sbjct: 658 SLQTYTLLLSCCTEA 672
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 114/262 (43%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
ALG+F +K K + TY ++ +AR +N L E+ P++ TYN ++
Sbjct: 362 ALGFFYWLKRQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLI 421
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+YG+ + E SV RM+ C+PD +T+ LID + K D +++ + +
Sbjct: 422 HSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLS 481
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P T++ +I GKA A +F +M P+ +TY +I + N A E+
Sbjct: 482 PDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALEL 541
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+ ++ G T + ++E G EA+ +F PD Y LL + K
Sbjct: 542 YRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGK 601
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
E + + M G+ PN
Sbjct: 602 VGNVEKSWEWYQAMLNAGLCPN 623
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 4/217 (1%)
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
D +TY ++ G+ + +L+ M + C+P+++T+N LI SYG+ ++ VF
Sbjct: 378 DGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSVF 437
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
+ + +P T+ ++I + KA A +++QKM +P TY II G
Sbjct: 438 DRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKA 497
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAM--LEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+++ A ++F E+ G + T N M L+A N PT +L + + N G PD
Sbjct: 498 GHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARN-YPTALEL-YRDMQNAGFQPDKV 555
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
TY ++ + E + + M++ VP++ +
Sbjct: 556 TYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVY 592
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 135/303 (44%), Gaps = 20/303 (6%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT YS +I +GK G A LF EM + GC P+ YN +I + KA+ A
Sbjct: 483 DTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIA----LQAKARNYPTA 538
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L ++ M+ +P+ VTY+I++ ++++ A+F E+ PD Y ++D
Sbjct: 539 LELYRDMQNAG-FQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVD 597
Query: 264 AYGKNGMI-KEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+GK G + K E + + + C P++ T N L+ ++ + + +S++ +
Sbjct: 598 LWGKVGNVEKSWEWYQAMLNAGLC-PNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQ 656
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE- 381
P+L T+ ++ +AR + + M + +++M + R+
Sbjct: 657 PSLQTYTLLLSCCTEARSSFDMGFCGELMAVTGHPAHMF----LLSMPAAGPDGQNVRDH 712
Query: 382 ---IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD-----SSTY 433
D + ++ K ++A+++ +GL EA ++E + V PD SS Y
Sbjct: 713 VSKFLDLMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAVREKSSCY 772
Query: 434 KLL 436
L+
Sbjct: 773 WLI 775
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 106/249 (42%), Gaps = 8/249 (3%)
Query: 236 VDQVNALFKELHESILAPD-IYTYNGVMDAYGKNGMIKEMESVLSRM-------KSNQCK 287
V+ V+ + ++L A + + N +MDAY N ++K+++ + + K
Sbjct: 317 VENVSRILRQLSWGPAAEEALRNLNCLMDAYQANQVLKQIQDHPVALGFFYWLKRQTGFK 376
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
D T+ ++ G+ + F + ++ ++ +P + T+N +I +YG+A +A V
Sbjct: 377 HDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSV 436
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F +M P +TY +I ++ + A ++ ++ + T + ++
Sbjct: 437 FDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGK 496
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
G T A LF + G P+ TY ++ KA +L + M+ G P+K
Sbjct: 497 AGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVT 556
Query: 468 FLEALETFS 476
+ +E
Sbjct: 557 YSIVMEVLG 565
>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
Length = 838
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 156/344 (45%), Gaps = 9/344 (2%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ I + K G T+ A+ +F M+ C+P + Y LI + KA AL
Sbjct: 170 VYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLY----GKASKSYMALKV 225
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F +M+ ++CKPNI T+ L+ A A+ ++ +F++L E+ L PD+Y YN +M+AY
Sbjct: 226 FHEMRS-QKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYS 284
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+ G + S M+ C+PD ++N+++D+YG+ + + VF+ + PT+
Sbjct: 285 RAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMK 344
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
+ ++ Y +A K E + +M P ++ +YG + E+ +
Sbjct: 345 SHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAM 404
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
K +ST N ++ Y G + LF + + PD T+ AY++
Sbjct: 405 EKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQY 464
Query: 447 ELVQKLLKRMEQNGIVPN----KRFFLEALETFSSSLAGSQSGS 486
++ + M G P+ K L+ +S L GS S S
Sbjct: 465 NRCLEVFEEMIDAGCYPDGGTAKNVLLKVAIFMASFLVGSASPS 508
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 139/291 (47%), Gaps = 5/291 (1%)
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
S PD YN LI A+ KA + L + RC P TY +LL+A +
Sbjct: 92 SSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEA-----RCVPTEDTYALLLKAYCTS 146
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+++ A+F E+ + P YN +D K G ++ + RMK ++C+P T+
Sbjct: 147 GLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATY 206
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+LI+ YGK +VF + K KP + TF +++ + + L KAE +F+++
Sbjct: 207 TMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQE 266
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P Y ++ Y A EIF + +G + ++ N M++AY GL +
Sbjct: 267 AGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHED 326
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A +FE +G+TP ++ LL AY++A ++++ +M ++GI P+
Sbjct: 327 AQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPD 377
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 133/262 (50%), Gaps = 6/262 (2%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+++ YN+L+ A Q + + + EL E+ P TY ++ AY +G++++ E+V
Sbjct: 96 PDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAV 155
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
+ M+ P + +N ID K K ++F+ + + +P+ T+ +I YGK
Sbjct: 156 FAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGK 215
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMY---GYCDNVSRAREIFDELSKLGKDMK 394
A A VF +M + K P+ T+ ++ + G C+ +A EIF++L + G +
Sbjct: 216 ASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCE---KAEEIFEQLQEAGLEPD 272
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
V NA++EAY G P A +F +MG PD ++Y ++ AY +A + E Q + +
Sbjct: 273 VYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFE 332
Query: 455 RMEQNGIVPNKRFFLEALETFS 476
M++ GI P + + L +S
Sbjct: 333 VMKRLGITPTMKSHMLLLSAYS 354
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 146/336 (43%), Gaps = 5/336 (1%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W + + W+ + + D Y+ LI G+K + A + E+ + C P Y
Sbjct: 77 QWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTY 136
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
L+ A+ + L KA F +M+ P+ V YN + + + + +F
Sbjct: 137 ALLLKAYC----TSGLLEKAEAVFAEMRKYG-FPPSAVVYNAYIDGLMKGGDTQKAVEIF 191
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR 303
+ + P TY +++ YGK V M+S +CKP+I TF L++++ +
Sbjct: 192 ERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFARE 251
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
+K E++F+ L + +P + +N+++ Y +A A +F M M P +Y
Sbjct: 252 GLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASY 311
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
++ YG A+ +F+ + +LG + + +L AY G + + + H
Sbjct: 312 NIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHK 371
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
G+ PD+ + Y + E ++++L ME+
Sbjct: 372 SGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKG 407
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 66/161 (40%)
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
L S P + +N +I YG+ L KAE + ++ + P+ TY ++ Y
Sbjct: 89 LYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGL 148
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+ +A +F E+ K G NA ++ G +A +FE P ++TY +
Sbjct: 149 LEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTM 208
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
L Y KA+ + K+ M PN F + F+
Sbjct: 209 LINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFA 249
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 151/321 (47%), Gaps = 5/321 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +Y+ LI K+G+ AM +FS+MR G PD Y A+I K+ + A
Sbjct: 340 DHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILC----KSGRVEDA 395
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ YF++M E P + YN L+ ++ L E+ + + + +N ++D
Sbjct: 396 MLYFEQMID-EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIID 454
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
++ K G + E E + M KPDIIT++ LID Y D+ ++ ++ KP
Sbjct: 455 SHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKP 514
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T+ ++I Y K G A +F++M + +P ITY I+ + A+E++
Sbjct: 515 NTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELY 574
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+++ G +++ST N +L C N L +A +F+N M + ++ T+ ++ A K
Sbjct: 575 VRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKV 634
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+ L NG+VPN
Sbjct: 635 GRNGEAKDLFVAFSSNGLVPN 655
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 154/360 (42%), Gaps = 12/360 (3%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRW--YIADTGIYSKLIAVMGKKGQTRLAMWLFS 169
C +L + L ++ + LE+ M R D Y+ +I K+G + A +
Sbjct: 161 CTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYH 220
Query: 170 EMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA 229
EM + PD Y+++I A K +A+ KA+ M PN TY ++
Sbjct: 221 EMLDRRISPDVVTYSSIIAALC----KGQAMDKAMEVLTSMV-KNGVMPNCRTYTSIMHG 275
Query: 230 -CAQARNVDQVNALFKELHESI----LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
C+ + + + L K + + L PDI TY ++ Y G + M ++L M N
Sbjct: 276 YCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRN 335
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
PD +N+LI +Y K+ D+ VF + P T+ ++I K+ A
Sbjct: 336 GIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDA 395
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
F++M +P I Y +I C+ RA E+ E+ G + N+++++
Sbjct: 396 MLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDS 455
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+C G E++ LF+ +GV PD TY L Y A + KLL M G+ PN
Sbjct: 456 HCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPN 515
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 148/325 (45%), Gaps = 8/325 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS +IA + K AM + + M +G P+ Y T+ +H + +A
Sbjct: 230 DVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTY----TSIMHGYCSSGQPKEA 285
Query: 204 LGYFQKMK--GME--RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
+G+ +K++ G+E +P+I TY LL+ A + ++AL + + + PD Y YN
Sbjct: 286 IGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYN 345
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
++ AY K G + E V S+M+ PD +T+ +I K + F+ ++
Sbjct: 346 ILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 405
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
P +NS+I +AE + +M + I + II + V +
Sbjct: 406 GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIES 465
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
++FD + ++G + T + +++ YC+ G EA L ++G+ P++ TY+ L
Sbjct: 466 EKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLING 525
Query: 440 YTKANMKELVQKLLKRMEQNGIVPN 464
Y K + L K ME +G+ P+
Sbjct: 526 YCKISRMGDALVLFKEMESSGVSPD 550
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 151/387 (39%), Gaps = 49/387 (12%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
K K + + VF M++Q D Y +I ++ K G+ AM F +M + G P
Sbjct: 353 KQGKVDEAMLVFSKMRQQGLN-PDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 411
Query: 181 SVYNALITAH-------------LHTRDKAKAL---------------AKALGYFQKMKG 212
VYN+LI L D+ L + + +
Sbjct: 412 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL 471
Query: 213 MER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
M R KP+I+TY+ L+ A +D+ L + L P+ TY +++ Y K
Sbjct: 472 MVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISR 531
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
+ + + M+S+ PDIIT+N+++ + + ++++ + S + L T+N
Sbjct: 532 MGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 591
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
++ K +L A +FQ + M T+ +I A+++F S G
Sbjct: 592 ILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNG 651
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
T M E GL E D LF + + G T DS +V+
Sbjct: 652 LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF------------IVR 699
Query: 451 KLLKRMEQN------GIVPNKRFFLEA 471
+LL+R E ++ K F LEA
Sbjct: 700 ELLQRGEITRAGTYLSMIDEKHFSLEA 726
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 110/257 (42%), Gaps = 17/257 (6%)
Query: 221 VTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYT----YNGVMDAYGKNGMIKEME 275
+T+ LL+ CA R D ++ + + + E PD+++ G+ D ++ E+
Sbjct: 123 ITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDE-NRSQEALELP 181
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
+++ + PD++++ +I+ + K K + ++ + P + T++S+I
Sbjct: 182 HMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAAL 241
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL------ 389
K + KA V M P+ TY I M+GYC + + +E L K+
Sbjct: 242 CKGQAMDKAMEVLTSMVKNGVMPNCRTYTSI--MHGYCSS-GQPKEAIGFLKKVRSDGVE 298
Query: 390 --GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G + ++T +L+ Y G L + G+ PD Y +L AY K +
Sbjct: 299 PDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVD 358
Query: 448 LVQKLLKRMEQNGIVPN 464
+ +M Q G+ P+
Sbjct: 359 EAMLVFSKMRQQGLNPD 375
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 86/209 (41%), Gaps = 12/209 (5%)
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY-G 336
++R + + P + T+ +LI + D +++ + TF ++
Sbjct: 75 MARAGAGKVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCA 134
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
R + V ++MT + P + C I + G CD +R++E EL + D +
Sbjct: 135 DKRTSDAMDIVLRRMTELSCMPD--VFSCTILLKGLCDE-NRSQEAL-ELPHMMADGRGG 190
Query: 397 TLNAMLEAY--CMNGLPTEADL--LFENSHNM---GVTPDSSTYKLLYKAYTKANMKELV 449
+ +Y +NG E D + H M ++PD TY + A K +
Sbjct: 191 GSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKA 250
Query: 450 QKLLKRMEQNGIVPNKRFFLEALETFSSS 478
++L M +NG++PN R + + + SS
Sbjct: 251 MEVLTSMVKNGVMPNCRTYTSIMHGYCSS 279
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 149/348 (42%), Gaps = 40/348 (11%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ I + K G + A +F M+ C+P Y LI + KA AL
Sbjct: 227 VYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETYTMLINLY----GKAGKSFMALKL 282
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F +M + CKPNI TY L+ A A+ ++ +F+++ E+ L PD+Y YN +M+AY
Sbjct: 283 FHEMMSHD-CKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYS 341
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+ G + S M+ C+PD ++N+L+D+YGK D E VFK + PT+
Sbjct: 342 RAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMK 401
Query: 327 T-----------------------------------FNSMIINYGKARLQGKAEYVFQKM 351
+ NSM+ YG+ GK E V + M
Sbjct: 402 SHMVLLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVM 461
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
Y TY +I YG + R ++F L G V T + + AY L
Sbjct: 462 EKGSYVADISTYNILINRYGQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLY 521
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
+ +FE + G PD T K+L A + + E V +++ M ++
Sbjct: 522 LKCLEIFEEMIDDGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMHKD 569
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 131/260 (50%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
KP+++ YN+L+ A Q + + + +L E+ P TY ++ AY +G++++ E+
Sbjct: 152 KPDVICYNLLIEAFGQKLLYKEAESTYLQLLEARCIPTEDTYALLIKAYCISGLLEKAEA 211
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
V + M++ + +N I+ K DK E++FK + KPT T+ +I YG
Sbjct: 212 VFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETYTMLINLYG 271
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
KA A +F +M + P+ TY ++ + +A E+F+++ + G + V
Sbjct: 272 KAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVY 331
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
NA++EAY G P A +F +MG PD ++Y +L AY KA ++ + + K M
Sbjct: 332 AYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDM 391
Query: 457 EQNGIVPNKRFFLEALETFS 476
++ GI P + + L +S
Sbjct: 392 KRVGITPTMKSHMVLLSAYS 411
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 178/434 (41%), Gaps = 56/434 (12%)
Query: 110 EHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFS 169
+ F + +L +W + + RW+ + + D Y+ LI G+K + A +
Sbjct: 120 DDIFTVAVQLRMRKQWDSIISICRWILLRSSFKPDVICYNLLIEAFGQKLLYKEAESTYL 179
Query: 170 EMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA 229
++ + C P Y LI A+ + L KA F +M+ + V YN +
Sbjct: 180 QLLEARCIPTEDTYALLIKAYCIS----GLLEKAEAVFAEMRNY-GLPSSAVVYNAYING 234
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
+ N D+ +FK + + P TY +++ YGK G + M S+ CKP+
Sbjct: 235 LMKGGNSDKAEEIFKRMKKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPN 294
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFK----------------------------------S 315
I T+ L++++ + +K E+VF+ S
Sbjct: 295 ICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFS 354
Query: 316 LM-HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
LM H +P ++N ++ YGKA Q AE VF+ M + TP+ ++ +++ Y
Sbjct: 355 LMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMG 414
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
+V++ EI +++ K G + LN+ML Y G + + + D STY
Sbjct: 415 SVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYN 474
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPN-------------KRFFLEALETFSSSLAG 481
+L Y +A E ++ L + + G+ P+ K+ +L+ LE F +
Sbjct: 475 ILINRYGQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEMIDD 534
Query: 482 S---QSGSAKTDLT 492
G+AK L
Sbjct: 535 GCYPDGGTAKVLLA 548
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
EV R M+K Y+AD Y+ LI G+ G LF + + G +PD + + I A
Sbjct: 456 EVLRVMEKGS-YVADISTYNILINRYGQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGA 514
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ K K K L F++M + C P+ T +LL AC+ +QV + + +H+
Sbjct: 515 Y----SKKKLYLKCLEIFEEMID-DGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMHKD 569
Query: 250 I 250
+
Sbjct: 570 M 570
>gi|334184699|ref|NP_001189682.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330253975|gb|AEC09069.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 613
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 183/420 (43%), Gaps = 52/420 (12%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
KW + V W+ ++ + D ++ LI G+K Q + A L+ ++ S P Y
Sbjct: 156 KWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTY 215
Query: 184 NALITAHL------------------HTRDKAKALA-----------------KALGYFQ 208
LI A+ H K + +A+ FQ
Sbjct: 216 ALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQ 275
Query: 209 KMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
+MK +RCKP TYN+++ +A L+ E+ P+I TY +++A+ +
Sbjct: 276 RMK-RDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFARE 334
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
G+ ++ E + +++ + +PD+ +N L++SY + ++F + H +P ++
Sbjct: 335 GLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASY 394
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
N M+ YG+A L AE VF++M + P+ ++ +++ Y +V++ I E+S+
Sbjct: 395 NIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSE 454
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
G + LN+ML Y G T+ + + N T D STY +L Y KA E
Sbjct: 455 NGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLER 514
Query: 449 VQKLLKRMEQNGIVPN-------------KRFFLEALETFS---SSLAGSQSGSAKTDLT 492
+++L +++ P+ K+ +++ LE F S G+AK L+
Sbjct: 515 IEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLS 574
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
AD Y+ LI + GK G LF E++ RPD + + I A+ + K K
Sbjct: 494 ADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAY----SRKKLYVK 549
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
L F++M C P+ T +LL AC+ V+QV ++ + +H+ +
Sbjct: 550 CLEVFEEMID-SGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGV 596
>gi|15226907|ref|NP_181058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100538|sp|O82178.1|PP186_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g35130
gi|3668091|gb|AAC61823.1| hypothetical protein [Arabidopsis thaliana]
gi|330253974|gb|AEC09068.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 183/420 (43%), Gaps = 52/420 (12%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
KW + V W+ ++ + D ++ LI G+K Q + A L+ ++ S P Y
Sbjct: 134 KWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTY 193
Query: 184 NALITAHL------------------HTRDKAKALA-----------------KALGYFQ 208
LI A+ H K + +A+ FQ
Sbjct: 194 ALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQ 253
Query: 209 KMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
+MK +RCKP TYN+++ +A L+ E+ P+I TY +++A+ +
Sbjct: 254 RMK-RDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFARE 312
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
G+ ++ E + +++ + +PD+ +N L++SY + ++F + H +P ++
Sbjct: 313 GLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASY 372
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
N M+ YG+A L AE VF++M + P+ ++ +++ Y +V++ I E+S+
Sbjct: 373 NIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSE 432
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
G + LN+ML Y G T+ + + N T D STY +L Y KA E
Sbjct: 433 NGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLER 492
Query: 449 VQKLLKRMEQNGIVPN-------------KRFFLEALETFS---SSLAGSQSGSAKTDLT 492
+++L +++ P+ K+ +++ LE F S G+AK L+
Sbjct: 493 IEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLS 552
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
AD Y+ LI + GK G LF E++ RPD + + I A+ + K K
Sbjct: 472 ADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAY----SRKKLYVK 527
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
L F++M C P+ T +LL AC+ V+QV ++ + +H+ +
Sbjct: 528 CLEVFEEMID-SGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGV 574
>gi|297734042|emb|CBI15289.3| unnamed protein product [Vitis vinifera]
Length = 793
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 158/315 (50%), Gaps = 5/315 (1%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L F W+++Q + D Y+ ++ ++G+ Q L +EM GC+P+ YN LI
Sbjct: 372 LGFFYWLKRQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLI- 430
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
H+ +A L +A+ F +M+ C+P+ VTY L+ A+A +D +++++ E
Sbjct: 431 ---HSYGRANYLNEAVSVFDRMQ-EAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQE 486
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
+ L+PD +TY+ +++ GK G + + M C P+++T+N++I K + +
Sbjct: 487 AHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPT 546
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
++++ + ++ +P T++ ++ G +AE +F +M + P Y ++
Sbjct: 547 ALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVD 606
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
++G NV ++ E + + G V T N++L A+ ++A L ++ +G+ P
Sbjct: 607 LWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQP 666
Query: 429 DSSTYKLLYKAYTKA 443
TY LL T+A
Sbjct: 667 SLQTYTLLLSCCTEA 681
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 114/262 (43%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
ALG+F +K K + TY ++ +AR +N L E+ P++ TYN ++
Sbjct: 371 ALGFFYWLKRQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLI 430
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+YG+ + E SV RM+ C+PD +T+ LID + K D +++ + +
Sbjct: 431 HSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLS 490
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P T++ +I GKA A +F +M P+ +TY +I + N A E+
Sbjct: 491 PDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALEL 550
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+ ++ G T + ++E G EA+ +F PD Y LL + K
Sbjct: 551 YRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGK 610
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
E + + M G+ PN
Sbjct: 611 VGNVEKSWEWYQAMLNAGLCPN 632
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 4/217 (1%)
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
D +TY ++ G+ + +L+ M + C+P+++T+N LI SYG+ ++ VF
Sbjct: 387 DGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSVF 446
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
+ + +P T+ ++I + KA A +++QKM +P TY II G
Sbjct: 447 DRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKA 506
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAM--LEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+++ A ++F E+ G + T N M L+A N PT +L + + N G PD
Sbjct: 507 GHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARN-YPTALEL-YRDMQNAGFQPDKV 564
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
TY ++ + E + + M++ VP++ +
Sbjct: 565 TYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVY 601
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 103/212 (48%), Gaps = 8/212 (3%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L +++ MQ+ DT YS +I +GK G A LF EM + GC P+ YN +I
Sbjct: 478 LHMYQKMQEAHLS-PDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIA 536
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
+ KA+ AL ++ M+ +P+ VTY+I++ ++++ A+F E+
Sbjct: 537 ----LQAKARNYPTALELYRDMQN-AGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKR 591
Query: 249 SILAPDIYTYNGVMDAYGKNGMI-KEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
PD Y ++D +GK G + K E + + + C P++ T N L+ ++ +
Sbjct: 592 KNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLC-PNVPTCNSLLSAFLRVHRLS 650
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
+ +S++ +P+L T+ ++ +AR
Sbjct: 651 DAYNLLQSMLRLGLQPSLQTYTLLLSCCTEAR 682
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 106/249 (42%), Gaps = 8/249 (3%)
Query: 236 VDQVNALFKELHESILAPD-IYTYNGVMDAYGKNGMIKEMESVLSRM-------KSNQCK 287
V+ V+ + ++L A + + N +MDAY N ++K+++ + + K
Sbjct: 326 VENVSRILRQLSWGPAAEEALRNLNCLMDAYQANQVLKQIQDHPVALGFFYWLKRQTGFK 385
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
D T+ ++ G+ + F + ++ ++ +P + T+N +I +YG+A +A V
Sbjct: 386 HDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSV 445
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F +M P +TY +I ++ + A ++ ++ + T + ++
Sbjct: 446 FDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGK 505
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
G T A LF + G P+ TY ++ KA +L + M+ G P+K
Sbjct: 506 AGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVT 565
Query: 468 FLEALETFS 476
+ +E
Sbjct: 566 YSIVMEVLG 574
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 6/122 (4%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ E LG + +F M+++ W + D +Y L+ + GK G + + M N
Sbjct: 568 IVMEVLGHCGHLEEAEAIFTEMKRKNW-VPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLN 626
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
+G P+ N+L++A L + L+ A Q M + +P++ TY +LL C +A
Sbjct: 627 AGLCPNVPTCNSLLSAFL----RVHRLSDAYNLLQSMLRLG-LQPSLQTYTLLLSCCTEA 681
Query: 234 RN 235
R+
Sbjct: 682 RS 683
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 148/317 (46%), Gaps = 5/317 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ LI +GK G+ A+ LF +M GC+PD Y +I K A A G F
Sbjct: 48 FTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLC----KIGETALAAGLF 103
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+KM+ C+ N+VTY+ L+ + + R V++ +F + ++P I+TY ++
Sbjct: 104 KKME-EAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCN 162
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
KE ++L+ M S P+++TFN+L+D++ K E V K++ +P + T
Sbjct: 163 FSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVT 222
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+NS++ Y +A +F M P +Y +I Y + A+++F+E+
Sbjct: 223 YNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMI 282
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G + N ++ C G EA LF+N H G P+ TY +L + K
Sbjct: 283 HQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLG 342
Query: 448 LVQKLLKRMEQNGIVPN 464
+L + M+ + PN
Sbjct: 343 KAFRLFRAMQSTYLKPN 359
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 169/356 (47%), Gaps = 10/356 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L LGK K+ Q +E+F M R D Y+ +I + K G+T LA LF +M +
Sbjct: 51 LINGLGKVGKFAQAVELFDDMVA-RGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEA 109
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC+ + Y+ LI H+ K + + +AL F MK + P I TY L++
Sbjct: 110 GCQLNVVTYSTLI----HSLCKYRRVNEALDIFSYMKAKD-ISPTIFTYTSLIQGLCNFS 164
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ +AL E+ + P++ T+N ++D + K G + E VL M +PD++T+N
Sbjct: 165 RWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYN 224
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
L+ Y + ++F ++ KP + +++ +I Y KA+ +A+ +F +M
Sbjct: 225 SLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQ 284
Query: 355 KYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
TP+ ++Y +I +G C + A+++F + G + T +L+ +C G
Sbjct: 285 GSTPNNVSYNTLI--HGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLG 342
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+A LF + + P+ Y +L A K+ + ++L + G+ PN + +
Sbjct: 343 KAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIY 398
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 156/351 (44%), Gaps = 8/351 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI-YSKLIAVMGKKGQTRLAMWLFSEMRN 173
L L K + + L++F +M+ + I+ T Y+ LI + + + A L +EM +
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKD--ISPTIFTYTSLIQGLCNFSRWKEASALLNEMTS 178
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
P+ +N L+ + K LA A G + M M +P++VTYN L+ +
Sbjct: 179 LNIMPNVVTFNVLVDTFCK---EGKVLA-AEGVLKTMTEM-GVEPDVVTYNSLMYGYSMW 233
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
V + LF + PD+++Y+ +++ Y K I E + + + M P+ +++
Sbjct: 234 TEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSY 293
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N LI + + + +FK++ + P L T+ ++ + K GKA +F+ M +
Sbjct: 294 NTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQS 353
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P+ + Y ++ N+ ARE+F EL +G V ++ C GL E
Sbjct: 354 TYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDE 413
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A F N + G PD +Y ++ + + + + L+ M G + +
Sbjct: 414 ALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITD 464
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 126/295 (42%), Gaps = 7/295 (2%)
Query: 171 MRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME-RCKPNIVTYNILLRA 229
M +G P+ N LI + LG+ KG++ +P IVT+ L+
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQ------RVDLGFSVLAKGIKLGLQPTIVTFTTLING 54
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
+ Q LF ++ PD YTY +++ K G + +M+ C+ +
Sbjct: 55 LGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLN 114
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
++T++ LI S K + ++ +F + PT+ T+ S+I +A +
Sbjct: 115 VVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLN 174
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
+MT++ P+ +T+ ++ + V A + ++++G + V T N+++ Y M
Sbjct: 175 EMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWT 234
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA LF+ G PD +Y +L Y KA + ++L M G PN
Sbjct: 235 EVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPN 289
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 77/188 (40%)
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P+ T N+LI+ + + Q D V + +PT+ TF ++I GK +A +
Sbjct: 8 PNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVEL 67
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F M A P TY II + A +F ++ + G + V T + ++ + C
Sbjct: 68 FDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCK 127
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
EA +F ++P TY L + + + LL M I+PN
Sbjct: 128 YRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVT 187
Query: 468 FLEALETF 475
F ++TF
Sbjct: 188 FNVLVDTF 195
>gi|414888269|tpg|DAA64283.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 616
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 172/434 (39%), Gaps = 74/434 (17%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRL----------- 163
++ E + W + L +F++MQ+Q W D I++ +I V+G++G L
Sbjct: 109 VYREFSRRGDWQRSLRLFKYMQRQSWCRPDEHIHAIVIGVLGRQGPALLDKCLEVFHDLP 168
Query: 164 ------------------------AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKA 199
A L +M+ +G P + YN ++ A D
Sbjct: 169 AESRTALSYTSLIAAYARNALHEEARALLDQMKATGVAPTAATYNTVLAACARATDPPVP 228
Query: 200 LAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
LG F +M+ +P++ TYN LL A A DQ L + E+ ++PD +
Sbjct: 229 FDMLLGLFAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVS 288
Query: 258 YNGVMDAYGKNG-------MIKEMES----------------------------VLSRMK 282
Y ++DA+ G + EM + VL +M+
Sbjct: 289 YRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQ 348
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
++ C P T+ +L+D YG++ FD + Q+F+ M + P T+N + +G
Sbjct: 349 ADGCAPTAATYRVLLDLYGRQGRFDGVRQLFRE-MRTAVPPDTATYNVLFRVFGDGGFFK 407
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
+ +F M P +T E ++ G+ ARE+ + +++ G ++
Sbjct: 408 EVVELFHDMLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLV 467
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN-GI 461
EA + EA + F +G P TY L AY + + + + + RM N GI
Sbjct: 468 EALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSRMSNNAGI 527
Query: 462 VPNKRFFLEALETF 475
+K F +E +
Sbjct: 528 QKSKDSFDALIEAY 541
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 133/322 (41%), Gaps = 7/322 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT Y ++ G A LFSEM +G D S Y L+ AH + A A A
Sbjct: 285 DTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHT----RVGATADA 340
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ ++M+ + C P TY +LL + D V LF+E+ ++ PD TYN +
Sbjct: 341 VAVLRQMQA-DGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMRTAV-PPDTATYNVLFR 398
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+G G KE+ + M +PD++T ++ + G +V + + P
Sbjct: 399 VFGDGGFFKEVVELFHDMLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVP 458
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T + ++ G A + +A F MT + P+ TY + Y A IF
Sbjct: 459 TADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIF 518
Query: 384 DELSK-LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+S G + +A++EAYC +A + PD + + + AY
Sbjct: 519 SRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCI 578
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
A + + ++ + ++ + +P+
Sbjct: 579 AGVIDESKEQFEELQSSVTMPS 600
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 5/173 (2%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
EV +M ++ + Y+ L+ +G A F+ M G P YNAL A
Sbjct: 446 EVLEYMTRE-GMVPTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFA 504
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ + +A F +M + + +++ L+ A Q +D + E+ +S
Sbjct: 505 YA----RGGLFQEAEAIFSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKS 560
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
PD + GV++AY G+I E + ++S+ P +I + +++ Y +
Sbjct: 561 RFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTMPSVIAYCMMLSLYAR 613
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 84/209 (40%), Gaps = 34/209 (16%)
Query: 282 KSNQCKPDIITFNLLIDSYGKRQA--FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
+ + C+PD ++I G++ DK +VF L E T ++ S+I Y +
Sbjct: 131 RQSWCRPDEHIHAIVIGVLGRQGPALLDKCLEVFHDL--PAESRTALSYTSLIAAYARNA 188
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLN 399
L +A + +M A P+ TY ++ C + FD L L +M+
Sbjct: 189 LHEEARALLDQMKATGVAPTAATYNTVLAA---CARATDPPVPFDMLLGLFAEMR----- 240
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
+ + V PD +TY L A ++ + + LL M +
Sbjct: 241 --------------------HDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEA 280
Query: 460 GIVPNKRFFLEALETFSSSLAGSQSGSAK 488
G+ P+ + ++ F+S AG+ S +A+
Sbjct: 281 GVSPDTVSYRHIVDAFAS--AGNLSRAAE 307
>gi|414888270|tpg|DAA64284.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 890
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 172/434 (39%), Gaps = 74/434 (17%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRL----------- 163
++ E + W + L +F++MQ+Q W D I++ +I V+G++G L
Sbjct: 131 VYREFSRRGDWQRSLRLFKYMQRQSWCRPDEHIHAIVIGVLGRQGPALLDKCLEVFHDLP 190
Query: 164 ------------------------AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKA 199
A L +M+ +G P + YN ++ A D
Sbjct: 191 AESRTALSYTSLIAAYARNALHEEARALLDQMKATGVAPTAATYNTVLAACARATDPPVP 250
Query: 200 LAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
LG F +M+ +P++ TYN LL A A DQ L + E+ ++PD +
Sbjct: 251 FDMLLGLFAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVS 310
Query: 258 YNGVMDAYGKNG-------MIKEMES----------------------------VLSRMK 282
Y ++DA+ G + EM + VL +M+
Sbjct: 311 YRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQ 370
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
++ C P T+ +L+D YG++ FD + Q+F+ M + P T+N + +G
Sbjct: 371 ADGCAPTAATYRVLLDLYGRQGRFDGVRQLFRE-MRTAVPPDTATYNVLFRVFGDGGFFK 429
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
+ +F M P +T E ++ G+ ARE+ + +++ G ++
Sbjct: 430 EVVELFHDMLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLV 489
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN-GI 461
EA + EA + F +G P TY L AY + + + + + RM N GI
Sbjct: 490 EALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSRMSNNAGI 549
Query: 462 VPNKRFFLEALETF 475
+K F +E +
Sbjct: 550 QKSKDSFDALIEAY 563
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 133/322 (41%), Gaps = 7/322 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT Y ++ G A LFSEM +G D S Y L+ AH + A A A
Sbjct: 307 DTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHT----RVGATADA 362
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ ++M+ + C P TY +LL + D V LF+E+ ++ PD TYN +
Sbjct: 363 VAVLRQMQA-DGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMRTAV-PPDTATYNVLFR 420
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+G G KE+ + M +PD++T ++ + G +V + + P
Sbjct: 421 VFGDGGFFKEVVELFHDMLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVP 480
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T + ++ G A + +A F MT + P+ TY + Y A IF
Sbjct: 481 TADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIF 540
Query: 384 DELSK-LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+S G + +A++EAYC +A + PD + + + AY
Sbjct: 541 SRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCI 600
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
A + + ++ + ++ + +P+
Sbjct: 601 AGVIDESKEQFEELQSSVTMPS 622
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 105/262 (40%), Gaps = 6/262 (2%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
EV +M ++ + Y+ L+ +G A F+ M G P YNAL A
Sbjct: 468 EVLEYMTREG-MVPTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFA 526
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ + +A F +M + + +++ L+ A Q +D + E+ +S
Sbjct: 527 YA----RGGLFQEAEAIFSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKS 582
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
PD + GV++AY G+I E + ++S+ P +I + +++ Y + +
Sbjct: 583 RFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTMPSVIAYCMMLSLYARNDRWTDA 642
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIIN-YGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+ + + ++ T S+I Y + EYV + T SF + ++
Sbjct: 643 YDLLEEMKTNRASSTHQVIASLIKGEYDDSSNWQMVEYVLENSTMEGCDYSFRFFNALLG 702
Query: 369 MYGYCDNVSRAREIFDELSKLG 390
+ + RA + D+ K G
Sbjct: 703 VLWWFGQKGRAARVLDQAVKFG 724
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 84/209 (40%), Gaps = 34/209 (16%)
Query: 282 KSNQCKPDIITFNLLIDSYGKRQA--FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
+ + C+PD ++I G++ DK +VF L E T ++ S+I Y +
Sbjct: 153 RQSWCRPDEHIHAIVIGVLGRQGPALLDKCLEVFHDL--PAESRTALSYTSLIAAYARNA 210
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLN 399
L +A + +M A P+ TY ++ C + FD L L +M+
Sbjct: 211 LHEEARALLDQMKATGVAPTAATYNTVLAA---CARATDPPVPFDMLLGLFAEMR----- 262
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
+ + V PD +TY L A ++ + + LL M +
Sbjct: 263 --------------------HDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEA 302
Query: 460 GIVPNKRFFLEALETFSSSLAGSQSGSAK 488
G+ P+ + ++ F+S AG+ S +A+
Sbjct: 303 GVSPDTVSYRHIVDAFAS--AGNLSRAAE 329
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 175/395 (44%), Gaps = 24/395 (6%)
Query: 86 LMRSFSDK--EPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIA 143
LM S S K +P V T N + L K+ K+L+ V M K
Sbjct: 311 LMDSMSGKGLKPCVFTYNAIIN------------GLCKTGKYLRAKGVLDEMLKIGMS-P 357
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT Y+ L+ + A +F EM + G PD ++ALI K L +A
Sbjct: 358 DTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI----GLLSKNGCLDQA 413
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L YF+ MK P+ V Y IL+ + + + + E+ E D+ TYN +++
Sbjct: 414 LKYFRDMKN-AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILN 472
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K M+ E + + + M PD TF LI+ Y K +K +F+ ++ KP
Sbjct: 473 GLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKP 532
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRARE 381
+ T+N++I + K K ++ M + + P+ I+Y +I GYC+ VS A
Sbjct: 533 DVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILIN--GYCNMGCVSEAFR 590
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
++DE+ + G + + T N +++ YC G +AD N G+ PD TY L +
Sbjct: 591 LWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFI 650
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
K + L+ +ME +G++P+ + L FS
Sbjct: 651 KEENMDRAFALVNKMENSGLLPDVITYNVILNGFS 685
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 175/391 (44%), Gaps = 45/391 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L E ++D + +F M Q + D +S LI ++ K G A+ F +M+N
Sbjct: 364 ILLVECCRNDNMMDAERIFDEMPSQ-GVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 422
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQ 232
+G PD +Y LI + +++AL +M +E+ C ++VTYN +L +
Sbjct: 423 AGLAPDNVIYTILIGGFC----RNGVMSEALKVRDEM--LEQGCVLDVVTYNTILNGLCK 476
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+ + + + LF E+ E + PD YT+ +++ Y K+G + + ++ M KPD++T
Sbjct: 477 EKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVT 536
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP----------------------------- 323
+N LID + K +K+ +++ ++ + P
Sbjct: 537 YNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMV 596
Query: 324 ------TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
T+ T N+++ Y +A KA+ M P ITY +I + +N+
Sbjct: 597 EKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMD 656
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
RA + +++ G V T N +L + G EA+L+ GV PD STY L
Sbjct: 657 RAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 716
Query: 438 KAY-TKANMKELVQKLLKRMEQNGIVPNKRF 467
+ T+ N+KE ++ M Q G VP+ +F
Sbjct: 717 NGHVTQNNLKEAF-RVHDEMLQRGFVPDDKF 746
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 156/356 (43%), Gaps = 16/356 (4%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
LL ++ K + E FR ++ + ++ S L+ + K G LA ++ E+
Sbjct: 189 LLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNS-LLGGLVKVGWVDLAWEIYQEVVR 247
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACA 231
SG + + N +I A K + + + M KG+ P++VTYN L+ A
Sbjct: 248 SGVQVNVYTLNIMINALC----KNQKIENTKSFLSDMEEKGV---FPDVVTYNTLINAYC 300
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ +++ L + L P ++TYN +++ K G + VL M PD
Sbjct: 301 RQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTA 360
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
T+N+L+ + E++F + P L +F+++I K +A F+ M
Sbjct: 361 TYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM 420
Query: 352 TAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
P + Y +I G+C N +S A ++ DE+ + G + V T N +L C
Sbjct: 421 KNAGLAPDNVIYTILIG--GFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEK 478
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK-ANMKELVQKLLKRMEQNGIVPN 464
+ +EAD LF GV PD T+ L Y+K NM + V L + M Q + P+
Sbjct: 479 MLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAV-TLFEMMIQRNLKPD 533
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 107/253 (42%)
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
C N + +++L+R QAR + + F+ L L I N ++ K G +
Sbjct: 180 CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 239
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
+ + + + ++ T N++I++ K Q + + + P + T+N++I Y
Sbjct: 240 EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 299
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
+ L +A + M+ P TY II RA+ + DE+ K+G
Sbjct: 300 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 359
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+T N +L C N +A+ +F+ + GV PD ++ L +K + K +
Sbjct: 360 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 419
Query: 456 MEQNGIVPNKRFF 468
M+ G+ P+ +
Sbjct: 420 MKNAGLAPDNVIY 432
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 175/391 (44%), Gaps = 45/391 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L E ++D + +F M Q + D +S LI ++ K G A+ F +M+N
Sbjct: 468 ILLVECCRNDNMMDAERIFDEMPSQ-GVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 526
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQ 232
+G PD +Y LI + +++AL +M +E+ C ++VTYN +L +
Sbjct: 527 AGLAPDNVIYTILIGGFC----RNGVMSEALKVRDEM--LEQGCXLDVVTYNTILNGLCK 580
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+ + + + LF E+ E + PD YT+ +++ Y K+G + + ++ M KPD++T
Sbjct: 581 EKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVT 640
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP----------------------------- 323
+N LID + K +K+ +++ ++ + P
Sbjct: 641 YNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMV 700
Query: 324 ------TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
T+ T N+++ Y +A KA+ M P ITY +I + +N+
Sbjct: 701 EKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMD 760
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
RA + +++ G V T N +L + G EA+L+ GV PD STY L
Sbjct: 761 RAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 820
Query: 438 KAY-TKANMKELVQKLLKRMEQNGIVPNKRF 467
+ T+ N+KE ++ M Q G VP+ +F
Sbjct: 821 NGHVTQNNLKEAF-RVHDEMLQRGFVPDDKF 850
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 175/395 (44%), Gaps = 24/395 (6%)
Query: 86 LMRSFSDK--EPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIA 143
LM S S K +P V T N + L K+ K+L+ V M K
Sbjct: 415 LMDSMSGKGLKPCVFTYNAIIN------------GLCKTGKYLRAKGVLDEMLKIGMS-P 461
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT Y+ L+ + A +F EM + G PD ++ALI K L +A
Sbjct: 462 DTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI----GLLSKNGCLDQA 517
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L YF+ MK P+ V Y IL+ + + + + E+ E D+ TYN +++
Sbjct: 518 LKYFRDMKN-AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILN 576
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K M+ E + + + M PD TF LI+ Y K +K +F+ ++ KP
Sbjct: 577 GLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKP 636
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRARE 381
+ T+N++I + K K ++ M + + P+ I+Y +I GYC+ VS A
Sbjct: 637 DVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILIN--GYCNMGCVSEAFR 694
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
++DE+ + G + + T N +++ YC G +AD N G+ PD TY L +
Sbjct: 695 LWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFI 754
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
K + L+ +ME +G++P+ + L FS
Sbjct: 755 KEENMDRAFALVNKMENSGLLPDVITYNVILNGFS 789
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 155/356 (43%), Gaps = 16/356 (4%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
LL ++ K + E FR ++ + ++ S L+ + K G LA ++ E+
Sbjct: 293 LLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNS-LLGGLVKVGWVDLAWEIYQEVVR 351
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACA 231
SG + + N +I A K + + + M KG+ P++VTYN L+ A
Sbjct: 352 SGVQVNVYTLNIMINALC----KNQKIENTKSFLSDMEEKGV---FPDVVTYNTLINAYC 404
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ +++ L + L P ++TYN +++ K G + VL M PD
Sbjct: 405 RQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTA 464
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
T+N+L+ + E++F + P L +F+++I K +A F+ M
Sbjct: 465 TYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDM 524
Query: 352 TAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
P + Y +I G+C N +S A ++ DE+ + G + V T N +L C
Sbjct: 525 KNAGLAPDNVIYTILIG--GFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEK 582
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK-ANMKELVQKLLKRMEQNGIVPN 464
+ +EAD LF GV PD T+ L Y K NM + V L + M Q + P+
Sbjct: 583 MLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAV-TLFEMMIQRNLKPD 637
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 107/253 (42%)
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
C N + +++L+R QAR + + F+ L L I N ++ K G +
Sbjct: 284 CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 343
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
+ + + + ++ T N++I++ K Q + + + P + T+N++I Y
Sbjct: 344 EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 403
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
+ L +A + M+ P TY II RA+ + DE+ K+G
Sbjct: 404 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 463
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+T N +L C N +A+ +F+ + GV PD ++ L +K + K +
Sbjct: 464 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 523
Query: 456 MEQNGIVPNKRFF 468
M+ G+ P+ +
Sbjct: 524 MKNAGLAPDNVIY 536
>gi|414888268|tpg|DAA64282.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 868
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 172/434 (39%), Gaps = 74/434 (17%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRL----------- 163
++ E + W + L +F++MQ+Q W D I++ +I V+G++G L
Sbjct: 109 VYREFSRRGDWQRSLRLFKYMQRQSWCRPDEHIHAIVIGVLGRQGPALLDKCLEVFHDLP 168
Query: 164 ------------------------AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKA 199
A L +M+ +G P + YN ++ A D
Sbjct: 169 AESRTALSYTSLIAAYARNALHEEARALLDQMKATGVAPTAATYNTVLAACARATDPPVP 228
Query: 200 LAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
LG F +M+ +P++ TYN LL A A DQ L + E+ ++PD +
Sbjct: 229 FDMLLGLFAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVS 288
Query: 258 YNGVMDAYGKNG-------MIKEMES----------------------------VLSRMK 282
Y ++DA+ G + EM + VL +M+
Sbjct: 289 YRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQ 348
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
++ C P T+ +L+D YG++ FD + Q+F+ M + P T+N + +G
Sbjct: 349 ADGCAPTAATYRVLLDLYGRQGRFDGVRQLFRE-MRTAVPPDTATYNVLFRVFGDGGFFK 407
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
+ +F M P +T E ++ G+ ARE+ + +++ G ++
Sbjct: 408 EVVELFHDMLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLV 467
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN-GI 461
EA + EA + F +G P TY L AY + + + + + RM N GI
Sbjct: 468 EALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSRMSNNAGI 527
Query: 462 VPNKRFFLEALETF 475
+K F +E +
Sbjct: 528 QKSKDSFDALIEAY 541
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 133/322 (41%), Gaps = 7/322 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT Y ++ G A LFSEM +G D S Y L+ AH + A A A
Sbjct: 285 DTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHT----RVGATADA 340
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ ++M+ + C P TY +LL + D V LF+E+ ++ PD TYN +
Sbjct: 341 VAVLRQMQA-DGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMRTAV-PPDTATYNVLFR 398
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+G G KE+ + M +PD++T ++ + G +V + + P
Sbjct: 399 VFGDGGFFKEVVELFHDMLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVP 458
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T + ++ G A + +A F MT + P+ TY + Y A IF
Sbjct: 459 TADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIF 518
Query: 384 DELSK-LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+S G + +A++EAYC +A + PD + + + AY
Sbjct: 519 SRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCI 578
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
A + + ++ + ++ + +P+
Sbjct: 579 AGVIDESKEQFEELQSSVTMPS 600
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 105/262 (40%), Gaps = 6/262 (2%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
EV +M ++ + Y+ L+ +G A F+ M G P YNAL A
Sbjct: 446 EVLEYMTREG-MVPTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFA 504
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ + +A F +M + + +++ L+ A Q +D + E+ +S
Sbjct: 505 YA----RGGLFQEAEAIFSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKS 560
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
PD + GV++AY G+I E + ++S+ P +I + +++ Y + +
Sbjct: 561 RFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTMPSVIAYCMMLSLYARNDRWTDA 620
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIIN-YGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+ + + ++ T S+I Y + EYV + T SF + ++
Sbjct: 621 YDLLEEMKTNRASSTHQVIASLIKGEYDDSSNWQMVEYVLENSTMEGCDYSFRFFNALLG 680
Query: 369 MYGYCDNVSRAREIFDELSKLG 390
+ + RA + D+ K G
Sbjct: 681 VLWWFGQKGRAARVLDQAVKFG 702
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 84/209 (40%), Gaps = 34/209 (16%)
Query: 282 KSNQCKPDIITFNLLIDSYGKRQA--FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
+ + C+PD ++I G++ DK +VF L E T ++ S+I Y +
Sbjct: 131 RQSWCRPDEHIHAIVIGVLGRQGPALLDKCLEVFHDL--PAESRTALSYTSLIAAYARNA 188
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLN 399
L +A + +M A P+ TY ++ C + FD L L +M+
Sbjct: 189 LHEEARALLDQMKATGVAPTAATYNTVLAA---CARATDPPVPFDMLLGLFAEMR----- 240
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
+ + V PD +TY L A ++ + + LL M +
Sbjct: 241 --------------------HDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEA 280
Query: 460 GIVPNKRFFLEALETFSSSLAGSQSGSAK 488
G+ P+ + ++ F+S AG+ S +A+
Sbjct: 281 GVSPDTVSYRHIVDAFAS--AGNLSRAAE 307
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 172/390 (44%), Gaps = 45/390 (11%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L E +++ +L+ ++F M R D +S LI V + G A+ F +M+ S
Sbjct: 296 LLVESCRNNNFLEAKDIFSDML-HRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTS 354
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQA 233
G PD +Y LI + + +++AL KM +E+ C ++V YN +L +
Sbjct: 355 GLVPDNVIYTILINGYC----RNGMMSEALEIRDKM--LEQGCALDVVAYNTILNGLCKK 408
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ + NALF E+ E + PD T+ ++ + K G + + S+ M KPDI+T+
Sbjct: 409 KLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTY 468
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSK--------------------------------- 320
N+LID + K +K +++ ++ K
Sbjct: 469 NILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIR 528
Query: 321 --EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
KPTL T N++I Y ++ KA+ KM + P ITY +I + + + +
Sbjct: 529 KGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDK 588
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A + +++ G V T N +L +C G EA+L+ G+ PD STY L
Sbjct: 589 AFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLIN 648
Query: 439 AY-TKANMKELVQKLLKRMEQNGIVPNKRF 467
Y ++ N+KE + M Q G VP+ F
Sbjct: 649 GYVSQDNLKEAF-RFHDEMLQRGFVPDDDF 677
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 156/354 (44%), Gaps = 44/354 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I + KKG+ A +F+EM + G PD + YN L+ + +A F
Sbjct: 258 YNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNN----FLEAKDIF 313
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
M +G+ P++++++ L+ ++ ++DQ F+++ S L PD Y +++ Y
Sbjct: 314 SDMLHRGVS---PDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGY 370
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+NGM+ E + +M C D++ +N +++ K++ +F ++ P
Sbjct: 371 CRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDF 430
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY--------------- 370
TF ++I + K GKA +F MT P +TY +I +
Sbjct: 431 CTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNE 490
Query: 371 ------------------GYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
GYC+ VS A ++DE+ + G + T N +++ YC +G
Sbjct: 491 MISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGD 550
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
++AD + GV PDS TY L + K + L+ +ME G+ P+
Sbjct: 551 LSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPD 604
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 120/298 (40%), Gaps = 11/298 (3%)
Query: 170 EMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA 229
+M G D YN LI A+ + L +A M G + KP + TYN ++
Sbjct: 210 DMEQKGIFADIVTYNTLINAYC----REGLLGEAFEVMNSMSG-KGLKPTLFTYNAVING 264
Query: 230 -CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
C + R V + +F E+ L+PD TYN ++ +N E + + S M P
Sbjct: 265 LCKKGRYV-RAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSP 323
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
D+I+F+ LI + D+ F+ + S P + +I Y + + +A +
Sbjct: 324 DLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIR 383
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
KM + Y I+ G C ++ A +FDE+ + G T ++ +C
Sbjct: 384 DKMLEQGCALDVVAYNTILN--GLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHC 441
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G +A LF + PD TY +L + K E +L M I PN
Sbjct: 442 KEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPN 499
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 137/290 (47%), Gaps = 11/290 (3%)
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNI---LLRAC 230
S C D V++ LI +++ +A+ L + F+ + R K +V+ N LL
Sbjct: 109 STCGVDNLVFDLLIRSYV----QARKLNEGTDTFKIL----RRKGFLVSINACNSLLGGL 160
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
+ VD ++ E+ S + ++YT N +++A K+ I +++ L M+ DI
Sbjct: 161 VKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADI 220
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
+T+N LI++Y + + +V S+ KPTL T+N++I K +A+ VF +
Sbjct: 221 VTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNE 280
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M ++ +P TY ++ +N A++IF ++ G + + ++++ NG
Sbjct: 281 MLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGH 340
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+A + F + G+ PD+ Y +L Y + M ++ +M + G
Sbjct: 341 LDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQG 390
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 78/193 (40%), Gaps = 37/193 (19%)
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
++ +ES++S S+ C D + F+LLI SY + + ++ FK L + K L + N+
Sbjct: 98 VEIVESLIS--MSSTCGVDNLVFDLLIRSYVQARKLNEGTDTFKIL---RRKGFLVSINA 152
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
+ + M + V A E+++E+++ G
Sbjct: 153 -------------CNSLLGGLVKMGW-------------------VDLAWEVYNEIARSG 180
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
++ V TLN M+ A C + + + G+ D TY L AY + +
Sbjct: 181 IELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAF 240
Query: 451 KLLKRMEQNGIVP 463
+++ M G+ P
Sbjct: 241 EVMNSMSGKGLKP 253
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 179/395 (45%), Gaps = 17/395 (4%)
Query: 77 LESKELVRVLMRSFSDKEPLVRTLNKYVK----VVRSEHCFLLFEELGKSDKWLQCLEVF 132
L SKE++ VL S D N + V +E C + E L + + VF
Sbjct: 89 LSSKEVMAVL-NSILDPTDAFSYFNSVAEMPFVVHTTETCNHMLEILRIHRRVGDMVVVF 147
Query: 133 RWMQKQRWYIADTGIYSKLIAVMG--KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
MQ Q I + + LI G +G R + F +MR +G + YN LI
Sbjct: 148 NLMQNQ---IIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLI--- 201
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
H ++ +AL +++M +E KP++ T++ L+ A + R+ + V +L +E+
Sbjct: 202 -HLLLQSGLCREALEMYRRMV-LEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLG 259
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
L P+IYTY + G+ G I E ++ RM+ + C PD++T+ +LID+ D
Sbjct: 260 LKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAM 319
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
++F + S KP T+ +M+ + G+ + + +M A Y P IT+ ++
Sbjct: 320 ELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNAL 379
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC-MNGLPTEADLLFENSHNMGVTPD 429
N+ A + D + K G + T N ++ +N L D LF N +GV P
Sbjct: 380 CKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALD-LFNNMETLGVVPT 438
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ TY L Y K+ + + ++M+ GI PN
Sbjct: 439 AYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPN 473
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 150/306 (49%), Gaps = 5/306 (1%)
Query: 163 LAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVT 222
+A LF+EM+N+GC PD YN L+ AH K+ + + +++M CKPN +T
Sbjct: 808 MAWNLFTEMKNAGCAPDVFTYNLLLDAH----GKSGKINELFELYEQMI-CSSCKPNTIT 862
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
+NI++ ++ ++D+ LF +L +P TY ++D K+G ++E + + M
Sbjct: 863 HNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMV 922
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
C+P+ +N+LI+ +GK + ++FK ++ +P L ++ S++ +A
Sbjct: 923 DYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVD 982
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
A + F+K+ I Y +I G + A ++DE+ G + + T N+++
Sbjct: 983 DALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLI 1042
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+ G+ +A L+E +G+ P+ TY L + Y+ + + + KRM G
Sbjct: 1043 LNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCS 1102
Query: 463 PNKRFF 468
PN F
Sbjct: 1103 PNTGTF 1108
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 173/408 (42%), Gaps = 48/408 (11%)
Query: 123 DKWLQCLEVFRWMQKQRW-------YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
DK+ C ++ R K+ W Y D ++ L+ + K G A L MR G
Sbjct: 342 DKFSDCGDLGR--VKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQG 399
Query: 176 CRPDPSVYNALITAHLHTRDKAKALA-------------------------------KAL 204
P+ YN LI+ L AL KAL
Sbjct: 400 VLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKAL 459
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
F+KMK + PNIV N L + A+ + + +F L + LAPD TYN +M
Sbjct: 460 ETFEKMK-IRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKC 518
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
Y K G + E +LS M NQC+PDII N LI++ K D+ ++F L K PT
Sbjct: 519 YSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPT 578
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ T+N++I GK +A +F MT P+ IT+ I+ D V A ++
Sbjct: 579 VVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLY 638
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+++ + V T N ++ + ++A LF M +TPD T L K
Sbjct: 639 KMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM-LTPDCVTLCTLLPGVVKNG 697
Query: 445 MKELVQKLLKR-MEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDL 491
+ E K+ + + + G+ ++RF+ + + +Q+G+ KT L
Sbjct: 698 LMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGIL-----TQAGTEKTIL 740
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 145/317 (45%), Gaps = 5/317 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+S L+ GK+ T L EM + G +P+ Y T + +A + +A
Sbjct: 232 FSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTY----TICIRVLGRAGRIDEACRIM 287
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M+ + C P++VTY +L+ A A +D LF ++ S PD TY ++D +
Sbjct: 288 KRMED-DGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSD 346
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + ++ S M+++ PD+ITF +L+++ K D+ + + P L T
Sbjct: 347 CGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHT 406
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N++I + A +F M + P+ TY I YG +A E F+++
Sbjct: 407 YNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMK 466
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G + NA L + G EA ++F + G+ PDS TY ++ K Y+KA +
Sbjct: 467 IRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVD 526
Query: 448 LVQKLLKRMEQNGIVPN 464
+LL M +N P+
Sbjct: 527 EAIELLSDMSENQCEPD 543
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 120/248 (48%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
KP + +YN L+ N + LF E+ + APD++TYN ++DA+GK+G I E+
Sbjct: 787 KPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFE 846
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+ +M + CKP+ IT N++I + K + DK +F L+ PT T+ ++
Sbjct: 847 LYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLL 906
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
K+ +A+ +F++M P+ Y +I +G +V+ A E+F + + G +
Sbjct: 907 KSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLK 966
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
+ +++ C G +A FE G+ DS Y L+ +++ E L M
Sbjct: 967 SYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEM 1026
Query: 457 EQNGIVPN 464
+ GI P+
Sbjct: 1027 QSRGINPD 1034
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 145/360 (40%), Gaps = 38/360 (10%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ I V+G+ G+ A + M + GC PD Y LI A A L A+ F
Sbjct: 267 YTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALC----TAGKLDDAMELF 322
Query: 208 QKMKG----------------------MERCK------------PNIVTYNILLRACAQA 233
KMK + R K P+++T+ IL+ A +A
Sbjct: 323 VKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKA 382
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
N+D+ L + + + P+++TYN ++ + + + + + M++ P T+
Sbjct: 383 GNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTY 442
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
L ID YGK DK + F+ + P + N+ + + + +A+ +F ++ +
Sbjct: 443 ILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKS 502
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P +TY ++ Y V A E+ ++S+ + + +N+++ G E
Sbjct: 503 NGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDE 562
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
A +F +M + P TY L K + +L M NG PN F L+
Sbjct: 563 AWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILD 622
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 114/260 (43%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
N +YN L+ Q+ + +++ + L P + T++ +M A GK + ++S+L
Sbjct: 193 NAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLL 252
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
M+S KP+I T+ + I G+ D+ ++ K + P + T+ +I A
Sbjct: 253 EEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTA 312
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
A +F KM A + P +TY ++ + C ++ R +E + E+ G V T
Sbjct: 313 GKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITF 372
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
++ A C G EA L + GV P+ TY L + N + L ME
Sbjct: 373 TILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMET 432
Query: 459 NGIVPNKRFFLEALETFSSS 478
G+VP ++ ++ + S
Sbjct: 433 LGVVPTAYTYILFIDFYGKS 452
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
E G+ D L E KQ D+ Y+ +I +G+ + A+ L+ EM++ G
Sbjct: 977 EAGRVDDALHYFEKL----KQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGIN 1032
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARN 235
PD YN+LI A + +A +++++ G+E PN+ TYN L+R + + N
Sbjct: 1033 PDLFTYNSLIL----NLGVAGMVEQAGKLYEELQFIGLE---PNVFTYNALIRGYSMSGN 1085
Query: 236 VDQVNALFKELHESILAPDIYTY 258
D A++K + +P+ T+
Sbjct: 1086 SDSAYAVYKRMMVGGCSPNTGTF 1108
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 172/341 (50%), Gaps = 16/341 (4%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L + + M+K + AD IY+ +I + K A+ LF+EM N G RPD Y++LI+
Sbjct: 243 LSLLKKMEKGKIE-ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 189 A---HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
+ D ++ L+ + + PN+VT++ L+ A + + + L+ E
Sbjct: 302 CLCNYGRWSDASRLLSDMIE--------RKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ + + PDI+TY+ +++ + + + E + + M S C P+++T++ LI + K +
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
++ ++F+ + T+ ++I + +AR A+ VF++M ++ P+ +TY
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN- 472
Query: 366 IITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
I + G C N +++A +F+ L + + + T N M+E C G + LF N
Sbjct: 473 -ILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
GV+P+ Y + + + KE LLK+M+++G +PN
Sbjct: 532 KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPN 572
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 152/335 (45%), Gaps = 11/335 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS I ++ Q LA+ + ++M G PD ++L+ + H+ K ++ A
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS----KRISDA 172
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ +M M KP+ T+ L+ + AL ++ + PD+ TY V++
Sbjct: 173 VALVDQMVEMGY-KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K G I S+L +M+ + + D++ +N +ID K + D +F + + +P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Query: 324 TLPTFNSMI---INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+ T++S+I NYG+ A + M K P+ +T+ +I + + A
Sbjct: 292 DVFTYSSLISCLCNYGR---WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+++DE+ K D + T ++++ +CM+ EA +FE + P+ TY L K +
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
KA E +L + M Q G+V N + + F
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 159/363 (43%), Gaps = 48/363 (13%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
Y DT ++ LI + + A+ L +M GC+PD Y ++ D +
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD----I 239
Query: 201 AKALGYFQKM-KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
AL +KM KG + + ++V YN ++ + +++D LF E+ + PD++TY+
Sbjct: 240 DLALSLLKKMEKG--KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYS 297
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
++ G + +LS M + P+++TF+ LID++ K + E+++ ++
Sbjct: 298 SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII------------ 367
P + T++S+I + +A+++F+ M + P+ +TY +I
Sbjct: 358 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEG 417
Query: 368 ---------------------TMYGY-----CDNVSRAREIFDELSKLGKDMKVSTLNAM 401
++G+ CDN A+ +F ++ +G + T N +
Sbjct: 418 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN---AQMVFKQMVSVGVHPNILTYNIL 474
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
L+ C NG +A ++FE + PD TY ++ + KA E +L + G+
Sbjct: 475 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV 534
Query: 462 VPN 464
PN
Sbjct: 535 SPN 537
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 135/315 (42%), Gaps = 44/315 (13%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH-LHTR-DKAKALAKALG 205
+S LI K+G+ A L+ EM PD Y++LI +H R D+AK +
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM----- 385
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
F+ M + C PN+VTY+ L++ +A+ V++ LF+E+ + L + TY ++ +
Sbjct: 386 -FELMISKD-CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGF 443
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ + V +M S P+I+T+N+L+D K K VF+ L S +P +
Sbjct: 444 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 503
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+N MI KA GK E E+F
Sbjct: 504 YTYNIMIEGMCKA---GKVE--------------------------------DGWELFCN 528
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
LS G V N M+ +C G EAD L + G P+S TY L +A +
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588
Query: 446 KELVQKLLKRMEQNG 460
+E +L+K M G
Sbjct: 589 REASAELIKEMRSCG 603
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 110/260 (42%), Gaps = 4/260 (1%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+IV +N LL A A+ + V +L +++ ++ D+YTY+ ++ + + + +V
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L++M +PDI+T + L++ Y + + ++ KP TF ++I
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKV 395
+A + +M P +TY ++ G C ++ A + ++ K + V
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVN--GLCKRGDIDLALSLLKKMEKGKIEADV 258
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
N +++ C +A LF N G+ PD TY L +LL
Sbjct: 259 VIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 318
Query: 456 MEQNGIVPNKRFFLEALETF 475
M + I PN F ++ F
Sbjct: 319 MIERKINPNVVTFSALIDAF 338
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 6/144 (4%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K+ K + + VF ++Q+ D Y+ +I M K G+ LF +
Sbjct: 473 ILLDGLCKNGKLAKAMVVFEYLQRSTME-PDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G P+ YN +I+ R +K A +L +KMK + PN TYN L+RA +
Sbjct: 532 KGVSPNVIAYNTMISGF--CRKGSKEEADSL--LKKMKE-DGPLPNSGTYNTLIRARLRD 586
Query: 234 RNVDQVNALFKELHESILAPDIYT 257
+ + L KE+ A D T
Sbjct: 587 GDREASAELIKEMRSCGFAGDAST 610
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 162/328 (49%), Gaps = 17/328 (5%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT---RDKAKA 199
AD IYS +I + K A+ LF+EM N G RPD Y++LI+ + D ++
Sbjct: 238 ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 297
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L+ L + PN+VT+N L+ A A+ + + LF E+ + + P+I TYN
Sbjct: 298 LSDMLE--------RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK-RQAFDKMEQVFKSLMH 318
+++ + + + E + + + M S C PD++T+N LI+ + K ++ D ME +F+ +
Sbjct: 350 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME-LFRDMSR 408
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--V 376
T+ ++I + +A A+ VF++M + P+ +TY ++ G C N +
Sbjct: 409 RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD--GLCKNGKL 466
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A +F+ L K + + T N M E C G + LF + GV PD Y +
Sbjct: 467 EKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTM 526
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ K +KE L +M+++G +P+
Sbjct: 527 ISGFCKKGLKEEAYTLFIKMKEDGPLPD 554
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 157/366 (42%), Gaps = 48/366 (13%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+ Y DT ++ L+ + + + A+ L M GC+PD Y A+I L R +
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING-LCKRGEP 221
Query: 198 KALAKALGYFQKM-KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
AL KM KG + + ++V Y+ ++ + + R+VD LF E+ + PD++
Sbjct: 222 DL---ALNLLNKMEKG--KIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TY+ ++ G + +LS M + P+++TFN LID++ K + E++F +
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT-------- 368
+ P + T+NS+I + +A+ +F M + P +TY +I
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKV 396
Query: 369 -------------------------MYGY-----CDNVSRAREIFDELSKLGKDMKVSTL 398
++G+ CDN A+ +F ++ G + T
Sbjct: 397 VDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDN---AQMVFKQMVSDGVHPNIMTY 453
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N +L+ C NG +A ++FE + PD TY ++ + KA E L +
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513
Query: 459 NGIVPN 464
G+ P+
Sbjct: 514 KGVKPD 519
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 128/310 (41%), Gaps = 42/310 (13%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH-LHTRDKAKALAKALGY 206
++ LI K+G+ A LF EM P+ YN+LI +H R L +A
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR-----LDEAQQI 367
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F M + C P++VTYN L+ +A+ V LF+++ L + TY ++ +
Sbjct: 368 FTLMVSKD-CLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFF 426
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+ + V +M S+ P+I+T+N L+D K +K VF+ L SK +P +
Sbjct: 427 QASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIY 486
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T+N M KA GK E ++F L
Sbjct: 487 TYNIMSEGMCKA---GKVE--------------------------------DGWDLFCSL 511
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
S G V N M+ +C GL EA LF G PDS TY L +A+ + K
Sbjct: 512 SLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDK 571
Query: 447 ELVQKLLKRM 456
+L+K M
Sbjct: 572 AASAELIKEM 581
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 158/390 (40%), Gaps = 47/390 (12%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
K + +++F M K R + + +SKL++ + K + L + +M G + Y
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVE-FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTY 103
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
N +I + ALA LG K+ P+IVT N LL + + AL
Sbjct: 104 NIMINCLCRRSQLSFALA-ILGKMMKLG----YGPSIVTLNSLLNGFCHGNRISEAVALV 158
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF---------- 293
++ E PD T+ ++ ++ E +++ RM C+PD++T+
Sbjct: 159 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 218
Query: 294 -------NLL------------------IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
NLL IDS K + D +F + + +P + T+
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278
Query: 329 NSMI---INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
+S+I NYG+ A + M K P+ +T+ +I + + A ++FDE
Sbjct: 279 SSLISCLCNYGR---WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDE 335
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ + D + T N+++ +CM+ EA +F + PD TY L + KA
Sbjct: 336 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK 395
Query: 446 KELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+L + M + G+V N + + F
Sbjct: 396 VVDGMELFRDMSRRGLVGNTVTYTTLIHGF 425
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 108/247 (43%), Gaps = 6/247 (2%)
Query: 123 DKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSV 182
D+ + ++F M + + D Y+ LI K + M LF +M G +
Sbjct: 359 DRLDEAQQIFTLMVSKDC-LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVT 417
Query: 183 YNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL 242
Y LI D A F++M + PNI+TYN LL + +++ +
Sbjct: 418 YTTLIHGFFQASDCDNAQM----VFKQMVS-DGVHPNIMTYNTLLDGLCKNGKLEKAMVV 472
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
F+ L +S + PDIYTYN + + K G +++ + + KPD+I +N +I + K
Sbjct: 473 FEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCK 532
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ ++ +F + P T+N++I + + + + + ++M + ++ T
Sbjct: 533 KGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDAST 592
Query: 363 YECIITM 369
Y + M
Sbjct: 593 YGLVTDM 599
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 86/180 (47%), Gaps = 6/180 (3%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
K+ K + +E+FR M + R + +T Y+ LI + A +F +M + G P+
Sbjct: 392 KAKKVVDGMELFRDMSR-RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNI 450
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
YN L+ KA+ Y QK K ME P+I TYNI+ +A V+
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMV-VFEYLQKSK-ME---PDIYTYNIMSEGMCKAGKVEDGW 505
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
LF L + PD+ YN ++ + K G+ +E ++ +MK + PD T+N LI ++
Sbjct: 506 DLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAH 565
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 118/279 (42%), Gaps = 5/279 (1%)
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L +A+ F +M R P+IV ++ LL A A+ + D V + +++ ++ ++YTYN
Sbjct: 46 LDEAVDLFGEMVK-SRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
+++ + + ++L +M P I+T N L++ + + + ++
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVS 377
+P TF +++ + +A + ++M P +TY +I G C
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN--GLCKRGEPD 222
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
A + +++ K + V + ++++ C +A LF N G+ PD TY L
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+LL M + I PN F ++ F+
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 169/366 (46%), Gaps = 13/366 (3%)
Query: 100 LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG 159
L Y + V+ E LF E+ +S+ +E WM + Y+ + V+GK G
Sbjct: 125 LAAYSRGVQLEKAEKLFHEMKESNYSPGTVE---WM-----IFSGIATYNTYLEVLGKSG 176
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
+ A F +M+ G P + + +I + KA KA F+ M+ C PN
Sbjct: 177 RLSQAEDTFRDMQKQGILPAVNTFTIMINIY----GKAYYSDKADDLFRSMRKA-LCPPN 231
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+ TY L+ A A+ N + +F EL PD+YTYN +++AY + + V
Sbjct: 232 LYTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQ 291
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
M +PD +++N+LID++G+ + V+ S+ + KPT+ + ++ +Y KA
Sbjct: 292 AMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAG 351
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLN 399
+AE + +++ P + +++ YG + + + + +STLN
Sbjct: 352 KVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSSVAKPDISTLN 411
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
++ AY G +A+ +F + + G+TPD ++ L AY + + + ++M +
Sbjct: 412 TLINAYAQGGYIEKAEEVFNSLESKGLTPDVMSWTSLMGAYAQRKLFRKCVSIFQKMVKA 471
Query: 460 GIVPNK 465
G +P++
Sbjct: 472 GCIPDR 477
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 171/387 (44%), Gaps = 41/387 (10%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
EL + W + + W+ + + D G ++ LI GK Q R A F M++ C
Sbjct: 56 ELRRLRNWRSVILILEWILQGTMFKPDVGCFNMLIDAYGKSKQWREAEKTFHLMKDFQCL 115
Query: 178 PDPSVYNALITA----------------------------------------HLHTRDKA 197
P + +N L+ A +L K+
Sbjct: 116 PTETSFNVLLAAYSRGVQLEKAEKLFHEMKESNYSPGTVEWMIFSGIATYNTYLEVLGKS 175
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
L++A F+ M+ + P + T+ I++ +A D+ + LF+ + +++ P++YT
Sbjct: 176 GRLSQAEDTFRDMQ-KQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKALCPPNLYT 234
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y +M+A+ + G E + + ++S PD+ T+N L+++Y + + ++VF++++
Sbjct: 235 YTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMV 294
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
+ +P ++N +I +G+A L A+ V+ M + P+ ++ +++ Y V+
Sbjct: 295 EAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAGKVT 354
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
A + E+ G N++L AY +G E + L E+ + PD ST L
Sbjct: 355 EAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSSVAKPDISTLNTLI 414
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPN 464
AY + E +++ +E G+ P+
Sbjct: 415 NAYAQGGYIEKAEEVFNSLESKGLTPD 441
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 159/340 (46%), Gaps = 6/340 (1%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
E LGKS + Q + FR MQKQ + ++ +I + GK + A LF MR +
Sbjct: 169 LEVLGKSGRLSQAEDTFRDMQKQG-ILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKAL 227
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
C P+ Y AL+ AH + +A F +++ + P++ TYN LL A ++ +
Sbjct: 228 CPPNLYTYTALMNAHAREGN----CVRAEEIFAELQSVGFI-PDVYTYNALLEAYSRGEH 282
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
+F+ + E+ + PD +YN ++DA+G+ G+ + ++V MK KP + + L
Sbjct: 283 PTGAKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHML 342
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
L+ SY K + E++ + + +S KP FNS++ YG + + E + + M +
Sbjct: 343 LLSSYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSSV 402
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
P T +I Y + +A E+F+ L G V + +++ AY L +
Sbjct: 403 AKPDISTLNTLINAYAQGGYIEKAEEVFNSLESKGLTPDVMSWTSLMGAYAQRKLFRKCV 462
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+F+ G PD +T K+ + + V +++R
Sbjct: 463 SIFQKMVKAGCIPDRATAKVFLSSCRSPEQVKEVTDMIER 502
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 118/277 (42%), Gaps = 44/277 (15%)
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
L ++ PD+ +N ++DAYGK+ +E E MK QC P +FN+L+ +Y +
Sbjct: 74 LQGTMFKPDVGCFNMLIDAYGKSKQWREAEKTFHLMKDFQCLPTETSFNVLLAAYSRGVQ 133
Query: 306 FDKMEQVFKSLMHSKEKP-----------------------------------------T 324
+K E++F + S P
Sbjct: 134 LEKAEKLFHEMKESNYSPGTVEWMIFSGIATYNTYLEVLGKSGRLSQAEDTFRDMQKQGI 193
Query: 325 LP---TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
LP TF MI YGKA KA+ +F+ M P+ TY ++ + N RA E
Sbjct: 194 LPAVNTFTIMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREGNCVRAEE 253
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
IF EL +G V T NA+LEAY PT A +F+ GV PD +Y +L A+
Sbjct: 254 IFAELQSVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVEAGVRPDQVSYNILIDAFG 313
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+A + Q + M++ G P + + L +++ +
Sbjct: 314 RAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKA 350
>gi|356512664|ref|XP_003525037.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74750-like [Glycine max]
Length = 873
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 160/316 (50%), Gaps = 7/316 (2%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L F W+++Q + D Y+ ++ ++G+ + L +M GC+P+ YN LI
Sbjct: 361 LGFFDWLRRQPGFRHDGHTYTTMVGILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLI- 419
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
H A L +AL F +M+ + C+P+ VTY L+ A+A +D +++K + E
Sbjct: 420 ---HCYGCANYLKEALNVFNEMQEVG-CEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQE 475
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
+ L+PD +TY+ +++ GK G + + M + C P+++T+N++I K + ++
Sbjct: 476 AGLSPDTFTYSVIINCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEM 535
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+++ + ++ +P T++ ++ G +AE VF +M + P Y ++
Sbjct: 536 ALKLYHDMQNAGFQPDKVTYSIVMEALGHCGYLEEAESVFVEMQQKNWVPDEPVYGLLVD 595
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC-MNGLPTEADLLFENSHNMGVT 427
++G NV +A E + + G V T N++L A+ ++ LP +A L ++ +G+
Sbjct: 596 LWGKAGNVEKASEWYQAMLNAGLLPNVPTCNSLLSAFLRLHRLP-DAYNLVQSMVALGLR 654
Query: 428 PDSSTYKLLYKAYTKA 443
P TY LL T+A
Sbjct: 655 PSLQTYTLLLSCCTEA 670
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 120/262 (45%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
ALG+F ++ + + TY ++ +AR D ++ L +++ + P++ TYN ++
Sbjct: 360 ALGFFDWLRRQPGFRHDGHTYTTMVGILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLI 419
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
YG +KE +V + M+ C+PD +T+ LID + K D ++K + +
Sbjct: 420 HCYGCANYLKEALNVFNEMQEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLS 479
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P T++ +I GKA A ++F +M P+ +TY +I + N A ++
Sbjct: 480 PDTFTYSVIINCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKL 539
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+ ++ G T + ++EA G EA+ +F PD Y LL + K
Sbjct: 540 YHDMQNAGFQPDKVTYSIVMEALGHCGYLEEAESVFVEMQQKNWVPDEPVYGLLVDLWGK 599
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
A E + + M G++PN
Sbjct: 600 AGNVEKASEWYQAMLNAGLLPN 621
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 11/250 (4%)
Query: 234 RNVDQVNALFKELHESILAPD-IYTYNGVMDAYGKNGMIKEMESVLSRM-------KSNQ 285
R V+ V+ + ++L A +Y N MDAY N ++K+++ + +
Sbjct: 313 RIVEVVSDILRQLRWGPTAEKALYNLNFSMDAYQANQILKQLQDPSVALGFFDWLRRQPG 372
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
+ D T+ ++ G+ + FD + ++ + ++ +P + T+N +I YG A +A
Sbjct: 373 FRHDGHTYTTMVGILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLIHCYGCANYLKEAL 432
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
VF +M + P +TY +I ++ + A ++ + + G T + ++
Sbjct: 433 NVFNEMQEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVIINCL 492
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
G A LF G P+ TY ++ KA E+ KL M+ G P+K
Sbjct: 493 GKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQPDK 552
Query: 466 ---RFFLEAL 472
+EAL
Sbjct: 553 VTYSIVMEAL 562
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 8/156 (5%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ E LG + VF MQ++ W + D +Y L+ + GK G A + M N
Sbjct: 557 IVMEALGHCGYLEEAESVFVEMQQKNW-VPDEPVYGLLVDLWGKAGNVEKASEWYQAMLN 615
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
+G P+ N+L++A L + L A Q M + +P++ TY +LL C +A
Sbjct: 616 AGLLPNVPTCNSLLSAFL----RLHRLPDAYNLVQSMVALG-LRPSLQTYTLLLSCCTEA 670
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG 269
+ + F EL ++ + + M A G +G
Sbjct: 671 QPAHDM-GFFCEL-MAVTGHPAHAFLLSMPAAGPDG 704
>gi|414888267|tpg|DAA64281.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 873
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/434 (22%), Positives = 172/434 (39%), Gaps = 74/434 (17%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRL----------- 163
++ E + W + L +F++MQ+Q W D I++ +I V+G++G L
Sbjct: 109 VYREFSRRGDWQRSLRLFKYMQRQSWCRPDEHIHAIVIGVLGRQGPALLDKCLEVFHDLP 168
Query: 164 ------------------------AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKA 199
A L +M+ +G P + YN ++ A D
Sbjct: 169 AESRTALSYTSLIAAYARNALHEEARALLDQMKATGVAPTAATYNTVLAACARATDPPVP 228
Query: 200 LAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
LG F +M+ +P++ TYN LL A A DQ L + E+ ++PD +
Sbjct: 229 FDMLLGLFAEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVS 288
Query: 258 YNGVMDAYGKNG-------MIKEMES----------------------------VLSRMK 282
Y ++DA+ G + EM + VL +M+
Sbjct: 289 YRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQ 348
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
++ C P T+ +L+D YG++ FD + Q+F+ M + P T+N + +G
Sbjct: 349 ADGCAPTAATYRVLLDLYGRQGRFDGVRQLFRE-MRTAVPPDTATYNVLFRVFGDGGFFK 407
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
+ +F M P +T E ++ G+ ARE+ + +++ G ++
Sbjct: 408 EVVELFHDMLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGLV 467
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN-GI 461
EA + EA + F +G P TY L AY + + + + + RM N GI
Sbjct: 468 EALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIFSRMSNNAGI 527
Query: 462 VPNKRFFLEALETF 475
+K F +E +
Sbjct: 528 QKSKDSFDALIEAY 541
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 133/322 (41%), Gaps = 7/322 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT Y ++ G A LFSEM +G D S Y L+ AH + A A A
Sbjct: 285 DTVSYRHIVDAFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHT----RVGATADA 340
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ ++M+ + C P TY +LL + D V LF+E+ ++ PD TYN +
Sbjct: 341 VAVLRQMQA-DGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMRTAV-PPDTATYNVLFR 398
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+G G KE+ + M +PD++T ++ + G +V + + P
Sbjct: 399 VFGDGGFFKEVVELFHDMLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVP 458
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T + ++ G A + +A F MT + P+ TY + Y A IF
Sbjct: 459 TADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFAYARGGLFQEAEAIF 518
Query: 384 DELSK-LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+S G + +A++EAYC +A + PD + + + AY
Sbjct: 519 SRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCI 578
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
A + + ++ + ++ + +P+
Sbjct: 579 AGVIDESKEQFEELQSSVTMPS 600
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/262 (20%), Positives = 105/262 (40%), Gaps = 6/262 (2%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
EV +M ++ + Y+ L+ +G A F+ M G P YNAL A
Sbjct: 446 EVLEYMTREG-MVPTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNALAFA 504
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ + +A F +M + + +++ L+ A Q +D + E+ +S
Sbjct: 505 YA----RGGLFQEAEAIFSRMSNNAGIQKSKDSFDALIEAYCQGSRLDDAVKAYMEMRKS 560
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
PD + GV++AY G+I E + ++S+ P +I + +++ Y + +
Sbjct: 561 RFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTMPSVIAYCMMLSLYARNDRWTDA 620
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIIN-YGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+ + + ++ T S+I Y + EYV + T SF + ++
Sbjct: 621 YDLLEEMKTNRASSTHQVIASLIKGEYDDSSNWQMVEYVLENSTMEGCDYSFRFFNALLG 680
Query: 369 MYGYCDNVSRAREIFDELSKLG 390
+ + RA + D+ K G
Sbjct: 681 VLWWFGQKGRAARVLDQAVKFG 702
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 84/209 (40%), Gaps = 34/209 (16%)
Query: 282 KSNQCKPDIITFNLLIDSYGKRQA--FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
+ + C+PD ++I G++ DK +VF L E T ++ S+I Y +
Sbjct: 131 RQSWCRPDEHIHAIVIGVLGRQGPALLDKCLEVFHDL--PAESRTALSYTSLIAAYARNA 188
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLN 399
L +A + +M A P+ TY ++ C + FD L L +M+
Sbjct: 189 LHEEARALLDQMKATGVAPTAATYNTVLAA---CARATDPPVPFDMLLGLFAEMR----- 240
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
+ + V PD +TY L A ++ + + LL M +
Sbjct: 241 --------------------HDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEA 280
Query: 460 GIVPNKRFFLEALETFSSSLAGSQSGSAK 488
G+ P+ + ++ F+S AG+ S +A+
Sbjct: 281 GVSPDTVSYRHIVDAFAS--AGNLSRAAE 307
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 158/350 (45%), Gaps = 10/350 (2%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
F + GK++ + +EV ++ Y+ + Y+ L+ + KK + A L S M G
Sbjct: 335 FCKCGKAEDAIGLVEVM----VEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKG 390
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
C P+ YN +I KA + + + ++M C P+IVT+N ++ A +
Sbjct: 391 CVPNVVSYNTVIAGLC----KATKVHEGVLLLEQMLS-NNCVPDIVTFNTIIDAMCKTYR 445
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ-CKPDIITFN 294
VD LF + ES P++ TYN ++ K+ + E +L M Q C PDIIT+N
Sbjct: 446 VDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYN 505
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+ID K + D+ ++F ++ P T++ +I + K R +A V + M
Sbjct: 506 TVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKN 565
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ P ITY +I + N+ +A EI L G V T + ++ G +A
Sbjct: 566 GFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQA 625
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L E G+ PD+ TY L K + A+ E L + M Q G P+
Sbjct: 626 GELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPD 675
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 159/337 (47%), Gaps = 6/337 (1%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L++F+ M++ D YS ++ + K G+ A L M + GC P+ Y++L
Sbjct: 204 LQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSL-- 261
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
LH KA L +A Q+M C PNIVTYN ++ + +D+ L +E+ +
Sbjct: 262 --LHGLCKAGKLDEATALLQRMT-RSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVD 318
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
P++ TY ++DA+ K G ++ ++ M P++ T+N L+D + K+ ++
Sbjct: 319 GGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVER 378
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
Q+ S++ P + ++N++I KA + + ++M + P +T+ II
Sbjct: 379 ACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIID 438
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD-LLFENSHNMGVT 427
V A E+F+ + + G + T N+++ C + +A+ LL E + G +
Sbjct: 439 AMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCS 498
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
PD TY + K+ + KL +M +G+ P+
Sbjct: 499 PDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPD 535
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 152/343 (44%), Gaps = 6/343 (1%)
Query: 124 KWLQCLEVFRWMQK--QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
K Q E R M K QR + Y L+ + G A+ L +M G RP+
Sbjct: 126 KLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAI 185
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
YN + +H + L AL F++M+ C P++ TY+ ++ + ++ VD
Sbjct: 186 TYNNI----MHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACR 241
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
L + + +P++ TY+ ++ K G + E ++L RM + C P+I+T+N +ID +
Sbjct: 242 LVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHC 301
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
K D+ + + ++ +P + T+ ++ + K A + + M Y P+
Sbjct: 302 KLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLF 361
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
TY ++ M+ D V RA ++ + + G V + N ++ C E LL E
Sbjct: 362 TYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQM 421
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ PD T+ + A K ++ +L ++++G PN
Sbjct: 422 LSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPN 464
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 155/351 (44%), Gaps = 15/351 (4%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
Q+ + + Y+ +IA + K + + L +M ++ C PD +N +I A T +
Sbjct: 388 QKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTY-RV 446
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL-HESILAPDIY 256
+ Q+ C PN+VTYN L+ ++R DQ L +E+ + +PDI
Sbjct: 447 DIAYELFNLIQE----SGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDII 502
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TYN V+D K+ + + +M S+ PD +T++++I S K + D+ V + +
Sbjct: 503 TYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELM 562
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+ + P T+ ++I + K KA + Q + + P +T+ I +
Sbjct: 563 LKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRL 622
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY-KL 435
+A E+ + + + G T N +L+ +C +A LFE G PD++TY L
Sbjct: 623 RQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTL 682
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGS 486
+ K + K+L+ ++ K M G N SS L S S S
Sbjct: 683 VGHLVDKKSYKDLLAEVSKSMVDTGFKLNHE--------LSSKLEASVSAS 725
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 162/353 (45%), Gaps = 11/353 (3%)
Query: 127 QCLE-VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
QC + V + + + D+ Y+ +I + K + A+ L EM ++G P+ YN
Sbjct: 25 QCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNT 84
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
+ LH KA + AL ++M M C P++V+Y ++ + VD+ + +
Sbjct: 85 V----LHGFCKANRVENALWLLEQMV-MRGCPPDVVSYTTVINGLCKLDQVDEACRVMDK 139
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ + P++ TY ++D + + G + ++ +M +P+ IT+N ++ +
Sbjct: 140 MIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRK 199
Query: 306 FDKMEQVFKSLMHSKE-KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
D Q+FK + S P + T+++++ + K+ A + + M + +P+ +TY
Sbjct: 200 LDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYS 259
Query: 365 CIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
+ ++G C + A + +++ G + T N +++ +C G EA L E
Sbjct: 260 SL--LHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMV 317
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ G P+ TY +L A+ K E L++ M + G VPN + L+ F
Sbjct: 318 DGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMF 370
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 161/318 (50%), Gaps = 15/318 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSG--CRPDPSVYNALITAHLHTRDKAKALAKALG 205
Y LI + K G+T+ A+ L RN G +PD +YN +I K K + A
Sbjct: 301 YGTLINGLCKVGETKAALELLR--RNDGKLVQPDVVMYNTIIDGMC----KDKHVNDAFD 354
Query: 206 YFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
+ + K +R P++ TYN L+ C + D ++ LF ++ + PD+YT++ ++D
Sbjct: 355 LYSE-KVSKRIFPDVFTYNALISGFCIVGKLKDAID-LFNKMTSKNIIPDVYTFSILVDG 412
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ K+G IKE ++VL+ M KPD++T++ L+D Y +K E +F ++ H
Sbjct: 413 FCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTAN 472
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREI 382
+ ++N MI + K ++ +A +F++M + P ITY +I G C + +S A E+
Sbjct: 473 VQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLID--GLCKSGRISYALEL 530
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
DE+ G+ + T N++L+A C +A L G+ PD +TY +L K +
Sbjct: 531 VDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQ 590
Query: 443 ANMKELVQKLLKRMEQNG 460
+ E +K+ + + G
Sbjct: 591 SGKLEDARKVFEDLLVKG 608
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 157/357 (43%), Gaps = 46/357 (12%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +Y+ +I M K A L+SE + PD YNALI+ L A
Sbjct: 332 DVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFC----IVGKLKDA 387
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ F KM + P++ T++IL+ + N+ + + + + + PD+ TY+ +MD
Sbjct: 388 IDLFNKMTS-KNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMD 446
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
Y + + ES+ + M ++ ++N++I+ + K + D+ ++FK + H + P
Sbjct: 447 GYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFP 506
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY---TPSFITYECI-------------- 366
+ T++S+I K+ G+ Y + + M Y P ITY I
Sbjct: 507 DVITYSSLIDGLCKS---GRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAI 563
Query: 367 -------------------ITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
I + G C + + AR++F++L G ++ V M++ +
Sbjct: 564 TLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGF 623
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
C GL EA L G PD+ TY+++ + + + ++ +KLL+ M G++
Sbjct: 624 CDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLL 680
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 146/324 (45%), Gaps = 5/324 (1%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
Y DT + I KGQ A+ ++ G D Y LI L + KA
Sbjct: 259 YEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLING-LCKVGETKA- 316
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
AL ++ G + +P++V YN ++ + ++V+ L+ E + PD++TYN
Sbjct: 317 --ALELLRRNDG-KLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNA 373
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ + G +K+ + ++M S PD+ TF++L+D + K + + V +M
Sbjct: 374 LISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQS 433
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
KP + T++S++ Y KAE +F M+ T + +Y +I + V A
Sbjct: 434 IKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAM 493
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
++F E+ V T +++++ C +G + A L + H G PD TY + A
Sbjct: 494 KLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDAL 553
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
K + + LL +++ GI P+
Sbjct: 554 CKKHHVDKAITLLTKLKGQGIRPD 577
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 146/318 (45%), Gaps = 5/318 (1%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ I + K G T+ A+ +F M+ C+P + Y LI + KA AL
Sbjct: 278 VYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLY----GKASKSYMALKV 333
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F +M+ ++CKPNI T+ L+ A A+ ++ +F++L E+ L PD+Y YN +M+AY
Sbjct: 334 FHEMRS-QKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYS 392
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+ G + S M+ C+PD ++N+++D+YG+ + + VF+ + PT+
Sbjct: 393 RAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMK 452
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
+ ++ Y +A K E + +M P ++ +YG + E+ +
Sbjct: 453 SHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAM 512
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
K +ST N ++ Y G + LF + + PD T+ AY++
Sbjct: 513 EKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQY 572
Query: 447 ELVQKLLKRMEQNGIVPN 464
++ + M G P+
Sbjct: 573 NRCLEVFEEMIDAGCYPD 590
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 138/287 (48%), Gaps = 5/287 (1%)
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
PD YN LI A+ KA + L + RC P TY +LL+A + ++
Sbjct: 204 PDVICYNLLIDAYGQKSLYKKAESTYLELLEA-----RCVPTEDTYALLLKAYCTSGLLE 258
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ A+F E+ + P YN +D K G ++ + RMK ++C+P T+ +LI
Sbjct: 259 KAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLI 318
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+ YGK +VF + K KP + TF +++ + + L KAE +F+++
Sbjct: 319 NLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLE 378
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P Y ++ Y A EIF + +G + ++ N M++AY GL +A +
Sbjct: 379 PDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAV 438
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
FE +G+TP ++ LL AY++A ++++ +M ++GI P+
Sbjct: 439 FEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPD 485
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 131/261 (50%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+++ YN+L+ A Q + + + EL E+ P TY ++ AY +G++++ E+V
Sbjct: 204 PDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAV 263
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
+ M+ P + +N ID K K ++F+ + + +P+ T+ +I YGK
Sbjct: 264 FAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGK 323
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
A A VF +M + K P+ T+ ++ + +A EIF++L + G + V
Sbjct: 324 ASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYA 383
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
NA++EAY G P A +F +MG PD ++Y ++ AY +A + E Q + + M+
Sbjct: 384 YNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMK 443
Query: 458 QNGIVPNKRFFLEALETFSSS 478
+ GI P + + L +S +
Sbjct: 444 RLGITPTMKSHMLLLSAYSRA 464
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 143/296 (48%), Gaps = 7/296 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L GK+ K L+VF M+ Q+ + ++ L+ ++G A +F +++
Sbjct: 316 MLINLYGKASKSYMALKVFHEMRSQKCK-PNICTFTALVNAFAREGLCEKAEEIFEQLQE 374
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
+G PD YNAL+ A+ +A A F M+ M C+P+ +YNI++ A +A
Sbjct: 375 AGLEPDVYAYNALMEAY----SRAGFPYGAAEIFSLMQHMG-CEPDRASYNIMVDAYGRA 429
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ A+F+ + + P + ++ ++ AY + G + + E ++++M + KPD
Sbjct: 430 GLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVL 489
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N +++ YG+ F+KME+V ++ + T+N +I YG+A + E +F+ + A
Sbjct: 490 NSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPA 549
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
P +T+ I Y +R E+F+E+ G T +L A C NG
Sbjct: 550 RNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSA-CSNG 604
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 135/267 (50%), Gaps = 9/267 (3%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E+F +Q+ D Y+ L+ + G A +FS M++ GC PD + YN ++ A
Sbjct: 367 EIFEQLQEAGLE-PDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDA 425
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ +A A F+ MK + P + ++ +LL A ++A V + + ++H+S
Sbjct: 426 Y----GRAGLHEDAQAVFEVMKRLG-ITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKS 480
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+ PD + N +++ YG+ G ++ME VL+ M+ DI T+N+LI+ YG+ F +M
Sbjct: 481 GIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARM 540
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
E++F+SL P + T+ S I Y + + + VF++M P T + +++
Sbjct: 541 EELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSA 600
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVS 396
C N + +E+ + + KDM+ S
Sbjct: 601 ---CSNGDQIQEVTTVIRTMHKDMRTS 624
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 146/336 (43%), Gaps = 5/336 (1%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W + + W+ + + D Y+ LI G+K + A + E+ + C P Y
Sbjct: 185 QWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTY 244
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
L+ A+ + L KA F +M+ P+ V YN + + + + +F
Sbjct: 245 ALLLKAYC----TSGLLEKAEAVFAEMRKYG-FPPSAVVYNAYIDGLMKGGDTQKAVEIF 299
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR 303
+ + P TY +++ YGK V M+S +CKP+I TF L++++ +
Sbjct: 300 ERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFARE 359
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
+K E++F+ L + +P + +N+++ Y +A A +F M M P +Y
Sbjct: 360 GLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASY 419
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
++ YG A+ +F+ + +LG + + +L AY G + + + H
Sbjct: 420 NIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHK 479
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
G+ PD+ + Y + E ++++L ME+
Sbjct: 480 SGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKG 515
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 66/161 (40%)
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
L S P + +N +I YG+ L KAE + ++ + P+ TY ++ Y
Sbjct: 197 LYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGL 256
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+ +A +F E+ K G NA ++ G +A +FE P ++TY +
Sbjct: 257 LEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTM 316
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
L Y KA+ + K+ M PN F + F+
Sbjct: 317 LINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFA 357
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 174/365 (47%), Gaps = 17/365 (4%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIA--DTGIYSKLIAVMGKKG-QTRL-------A 164
L + L ++ + LE+ M R + D Y+ ++ K+G QT+L A
Sbjct: 169 LLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKA 228
Query: 165 MWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYN 224
M + + M +G PD YN++ LH + +A+G +KM+ + +PN+VTY+
Sbjct: 229 MEVLNTMVKNGVMPDCMTYNSI----LHGYCSSGQPKEAIGTLKKMRS-DGVEPNVVTYS 283
Query: 225 ILLR-ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
L+ C R+ + +F + + L PDI TY ++ + K G + E E + M
Sbjct: 284 SLMNYLCKNGRST-EARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVR 342
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
KPDIIT+N LID D+ ++ S++ KP + T+ ++I Y +
Sbjct: 343 IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDD 402
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A +F++M + +P+ ITY I+ + + A+E++ ++K G +++ST N +L
Sbjct: 403 ALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILH 462
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
C N L EA +F+N + ++ T+ ++ A K + + L NG+VP
Sbjct: 463 GLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVP 522
Query: 464 NKRFF 468
+ R +
Sbjct: 523 DVRTY 527
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 148/344 (43%), Gaps = 10/344 (2%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ +EV M K + D Y+ ++ GQ + A+ +MR+ G P+ Y++L
Sbjct: 227 KAMEVLNTMVKN-GVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSL 285
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
+ +L ++ K K +G+E P+I TY LL+ + V + LF +
Sbjct: 286 MN-YLCKNGRSTEARKIFDSMTK-RGLE---PDIATYRTLLQGHCKEGRVIESEKLFDLM 340
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
+ PDI TYN ++D G + E +L+ M S KPDI+T+ LI+ Y +
Sbjct: 341 VRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRM 400
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
D +FK ++ S P + T+N ++ R A+ ++ +T TY
Sbjct: 401 DDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYN-- 458
Query: 367 ITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
I ++G C N A +F L ++ T N M+ A G EA LF
Sbjct: 459 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSAN 518
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G+ PD TY L+ + + E + L ME+NG + R
Sbjct: 519 GLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRML 562
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 129/274 (47%), Gaps = 16/274 (5%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGV 261
ALG K KG + + +T+ LL+ CA R D ++ + + + E PD+++YN +
Sbjct: 114 ALGNVVK-KGF---RVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNL 169
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQ---CKPDIITFNLLIDSYGKR--------QAFDKME 310
+ +E +L M ++ PD++++N +++ + K QA DK
Sbjct: 170 LKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAM 229
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+V +++ + P T+NS++ Y + +A +KM + P+ +TY ++
Sbjct: 230 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYL 289
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
+ AR+IFD ++K G + ++T +L+ +C G E++ LF+ +GV PD
Sbjct: 290 CKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDI 349
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
TY L A + KLL M G+ P+
Sbjct: 350 ITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPD 383
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 143/330 (43%), Gaps = 23/330 (6%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS L+ + K G++ A +F M G PD + Y L+ H K + ++ F
Sbjct: 282 YSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHC----KEGRVIESEKLF 337
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
M + KP+I+TYN L+ C A +D+ L + + PDI TY +++ Y +
Sbjct: 338 DLMVRIG-VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCR 396
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ + ++ M S+ P+IIT+N+++ + ++++ S+ S + L T
Sbjct: 397 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELST 456
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N ++ K L +A +FQ + T+ +I C + A+++F S
Sbjct: 457 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHS 516
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G V T + M E G E D LF + G + DS +
Sbjct: 517 ANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRM------------LNS 564
Query: 448 LVQKLLKR--MEQNG----IVPNKRFFLEA 471
+V+KLL+R + + G ++ K F LEA
Sbjct: 565 IVRKLLQRGDITRAGTYLFMIDEKHFSLEA 594
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 156/316 (49%), Gaps = 5/316 (1%)
Query: 149 SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQ 208
S +I+ G++G A F +++ G P YNAL L KA ++AL +
Sbjct: 284 STVISACGREGLLDEAKEFFVGLKSQGYAPGTVTYNAL----LQVFGKAGIYSEALSIMK 339
Query: 209 KMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
+M+ C P+ VTYN L+ A +A ++ AL + E+ + P+ TY +++AYG+
Sbjct: 340 EMED-NNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRA 398
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
+ + S+ +MK + C P++ T+N ++ GK+ ++M ++ + P T+
Sbjct: 399 AQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITW 458
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
N+M+ G + + VFQ+M + + P T+ +IT G C + A +I+DE+ +
Sbjct: 459 NTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLE 518
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
G V+T NA+L A G A+ + ++ N G P ++Y L+ +Y K +
Sbjct: 519 AGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKG 578
Query: 449 VQKLLKRMEQNGIVPN 464
+ ++ K + I P+
Sbjct: 579 INRIEKDIYDGHIFPS 594
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 140/320 (43%), Gaps = 9/320 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ ++++ G KG + +F EM++ G PD +N LITA + + A +
Sbjct: 458 WNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITAS----GRCGSDIDAEKIY 513
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M G P++ TYN LL A A+ + ++ K++ P +Y+ ++++Y
Sbjct: 514 DEMLEAGF---TPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSY 570
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G +K + + + P + LI + K +A ME+ F++L KP L
Sbjct: 571 AKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQKHGYKPDL 630
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
FNSM+ + + + +A + + P +TY ++ +Y +A EI E
Sbjct: 631 VVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGECWKAEEILRE 690
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
L G + + N +++ +C GL EA + G+ P TY Y M
Sbjct: 691 LQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIRPCIVTYNTFVGGYAAKGM 750
Query: 446 KELVQKLLKRMEQNGIVPNK 465
+ ++L M ++ PN+
Sbjct: 751 FAEIDEVLSYMTKHDCRPNE 770
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 140/317 (44%), Gaps = 14/317 (4%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VF+ M K + D ++ LI G+ G A ++ EM +G P + YNAL+ A
Sbjct: 477 VFQEM-KSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNAL 535
Query: 191 LHTRD--KAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
D A+++ K + K KG KP+ +Y+++L + A+ V +N + K++++
Sbjct: 536 ARRGDWRTAESVIKDM----KNKGF---KPSETSYSLILNSYAKGGYVKGINRIEKDIYD 588
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
+ P ++ A K + ME ++ + KPD++ FN ++ + ++ D+
Sbjct: 589 GHIFPSWMLLRTLILANFKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDR 648
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
++ + +P L T+NS++ Y + KAE + +++ I+Y +I
Sbjct: 649 AHEIMHLIQECGLQPDLVTYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIK 708
Query: 369 MYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
G+C + A E+ G + T N + Y G+ E D +
Sbjct: 709 --GFCRQGLMHEALRTLSEMISRGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDC 766
Query: 427 TPDSSTYKLLYKAYTKA 443
P+ TYK++ Y KA
Sbjct: 767 RPNELTYKIVVDGYCKA 783
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 85/172 (49%), Gaps = 5/172 (2%)
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
F ++ G +PD V+N++++ + +R A + + + G++ P++VTYN L+
Sbjct: 618 FQALQKHGYKPDLVVFNSMLS--MFSRKNMHDRAHEIMHLIQECGLQ---PDLVTYNSLM 672
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
A+ + + +EL S D+ +YN V+ + + G++ E LS M S +
Sbjct: 673 DLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIR 732
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
P I+T+N + Y + F ++++V + +P T+ ++ Y KA+
Sbjct: 733 PCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCKAK 784
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
F+ +QK Y D +++ ++++ +K A + ++ G +PD YN+L+ +
Sbjct: 618 FQALQKH-GYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYA 676
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESI 250
+ KA + L Q K ++++YN +++ C Q + + L + + I
Sbjct: 677 RGGECWKA-EEILRELQNSGD----KSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGI 731
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
P I TYN + Y GM E++ VLS M + C+P+ +T+ +++D Y K + F
Sbjct: 732 -RPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCKAKKF 786
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 146/318 (45%), Gaps = 5/318 (1%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ I + K G T+ A+ +F M+ C+P + Y LI + KA AL
Sbjct: 240 VYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLY----GKASKSYMALKV 295
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F +M+ ++CKPNI T+ L+ A A+ ++ +F++L E+ L PD+Y YN +M+AY
Sbjct: 296 FHEMRS-QKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYS 354
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+ G + S M+ C+PD ++N+++D+YG+ + + VF+ + PT+
Sbjct: 355 RAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMK 414
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
+ ++ Y +A K E + +M P ++ +YG + E+ +
Sbjct: 415 SHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAM 474
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
K +ST N ++ Y G + LF + + PD T+ AY++
Sbjct: 475 EKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQY 534
Query: 447 ELVQKLLKRMEQNGIVPN 464
++ + M G P+
Sbjct: 535 NRCLEVFEEMIDAGCYPD 552
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 138/287 (48%), Gaps = 5/287 (1%)
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
PD YN LI A+ KA + L + RC P TY +LL+A + ++
Sbjct: 166 PDVICYNLLIDAYGQKSLYKKAESTYLELLEA-----RCVPTEDTYALLLKAYCTSGLLE 220
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ A+F E+ + P YN +D K G ++ + RMK ++C+P T+ +LI
Sbjct: 221 KAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLI 280
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+ YGK +VF + K KP + TF +++ + + L KAE +F+++
Sbjct: 281 NLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLE 340
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P Y ++ Y A EIF + +G + ++ N M++AY GL +A +
Sbjct: 341 PDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAV 400
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
FE +G+TP ++ LL AY++A ++++ +M ++GI P+
Sbjct: 401 FEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPD 447
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 131/261 (50%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+++ YN+L+ A Q + + + EL E+ P TY ++ AY +G++++ E+V
Sbjct: 166 PDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAV 225
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
+ M+ P + +N ID K K ++F+ + + +P+ T+ +I YGK
Sbjct: 226 FAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINLYGK 285
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
A A VF +M + K P+ T+ ++ + +A EIF++L + G + V
Sbjct: 286 ASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYA 345
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
NA++EAY G P A +F +MG PD ++Y ++ AY +A + E Q + + M+
Sbjct: 346 YNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMK 405
Query: 458 QNGIVPNKRFFLEALETFSSS 478
+ GI P + + L +S +
Sbjct: 406 RLGITPTMKSHMLLLSAYSRA 426
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 143/296 (48%), Gaps = 7/296 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L GK+ K L+VF M+ Q+ + ++ L+ ++G A +F +++
Sbjct: 278 MLINLYGKASKSYMALKVFHEMRSQKCK-PNICTFTALVNAFAREGLCEKAEEIFEQLQE 336
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
+G PD YNAL+ A+ +A A F M+ M C+P+ +YNI++ A +A
Sbjct: 337 AGLEPDVYAYNALMEAY----SRAGFPYGAAEIFSLMQHMG-CEPDRASYNIMVDAYGRA 391
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ A+F+ + + P + ++ ++ AY + G + + E ++++M + KPD
Sbjct: 392 GLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVL 451
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N +++ YG+ F+KME+V ++ + T+N +I YG+A + E +F+ + A
Sbjct: 452 NSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPA 511
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
P +T+ I Y +R E+F+E+ G T +L A C NG
Sbjct: 512 RNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSA-CSNG 566
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 135/267 (50%), Gaps = 9/267 (3%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E+F +Q+ D Y+ L+ + G A +FS M++ GC PD + YN ++ A
Sbjct: 329 EIFEQLQEAGLE-PDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDA 387
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ +A A F+ MK + P + ++ +LL A ++A V + + ++H+S
Sbjct: 388 Y----GRAGLHEDAQAVFEVMKRLG-ITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKS 442
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+ PD + N +++ YG+ G ++ME VL+ M+ DI T+N+LI+ YG+ F +M
Sbjct: 443 GIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARM 502
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
E++F+SL P + T+ S I Y + + + VF++M P T + +++
Sbjct: 503 EELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSA 562
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVS 396
C N + +E+ + + KDM+ S
Sbjct: 563 ---CSNGDQIQEVTTVIRTMHKDMRTS 586
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 146/336 (43%), Gaps = 5/336 (1%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W + + W+ + + D Y+ LI G+K + A + E+ + C P Y
Sbjct: 147 QWDAIVLICGWILYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTY 206
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
L+ A+ + L KA F +M+ P+ V YN + + + + +F
Sbjct: 207 ALLLKAYC----TSGLLEKAEAVFAEMRKYG-FPPSAVVYNAYIDGLMKGGDTQKAVEIF 261
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR 303
+ + P TY +++ YGK V M+S +CKP+I TF L++++ +
Sbjct: 262 ERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFARE 321
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
+K E++F+ L + +P + +N+++ Y +A A +F M M P +Y
Sbjct: 322 GLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASY 381
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
++ YG A+ +F+ + +LG + + +L AY G + + + H
Sbjct: 382 NIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHK 441
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
G+ PD+ + Y + E ++++L ME+
Sbjct: 442 SGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKG 477
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 66/161 (40%)
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
L S P + +N +I YG+ L KAE + ++ + P+ TY ++ Y
Sbjct: 159 LYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGL 218
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+ +A +F E+ K G NA ++ G +A +FE P ++TY +
Sbjct: 219 LEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTM 278
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
L Y KA+ + K+ M PN F + F+
Sbjct: 279 LINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFA 319
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 172/355 (48%), Gaps = 8/355 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L K K+ Q +E+F M R Y D Y+ +I + K G+T A LF +M +
Sbjct: 198 LINGLCKVGKFGQAVELFDDMVA-RGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEA 256
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC+PD Y+ +I + K + + +AL F MK + PNI TYN L++
Sbjct: 257 GCQPDVVTYSTIIDSLC----KDRRVNEALDIFSYMKA-KGISPNIFTYNSLIQGLCNFS 311
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ +A+ E+ + P+I T++ +++ + K G + E VL M +P+++T++
Sbjct: 312 RWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYS 371
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
L++ Y + + ++F ++ KP + ++N +I Y KA+ G+A+ +F +M
Sbjct: 372 SLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQ 431
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
TP ++Y +I + A ++F + G + T + +L+ +C G +A
Sbjct: 432 GLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKA 491
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKA-NMKELVQKLLKRMEQNGIVPNKRFF 468
LF + + P+ Y +L A K+ N+KE +KL + G+ PN + +
Sbjct: 492 FRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKE-ARKLFSELFVQGLQPNVQIY 545
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 148/317 (46%), Gaps = 5/317 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ LI + K G+ A+ LF +M G +PD Y +I K A G F
Sbjct: 195 FNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLC----KIGETVAAAGLF 250
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+KM G C+P++VTY+ ++ + + R V++ +F + ++P+I+TYN ++
Sbjct: 251 RKM-GEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCN 309
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+E ++L+ M S P+I+TF+LLI+ + K + V K++ +P + T
Sbjct: 310 FSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVT 369
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
++S++ Y +A +F M P +Y +I Y + A+++F+E+
Sbjct: 370 YSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMI 429
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G + + N +++ C G EA LF+N G PD TY +L + K
Sbjct: 430 HQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLA 489
Query: 448 LVQKLLKRMEQNGIVPN 464
+L + M+ + PN
Sbjct: 490 KAFRLFRAMQSTYLKPN 506
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 156/350 (44%), Gaps = 6/350 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ + L K + + L++F +M K + + Y+ LI + + R A + +EM +
Sbjct: 268 IIDSLCKDRRVNEALDIFSYM-KAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSL 326
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
P+ ++ LI K + +A G + M M +PN+VTY+ L+ +
Sbjct: 327 NIMPNIVTFSLLINIFC----KEGNVFEARGVLKTMTEMG-VEPNVVTYSSLMNGYSLQA 381
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
V + LF + PD+++YN +++ Y K I E + + + M PDI+++N
Sbjct: 382 EVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYN 441
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
LID + + +FK+++ + P L T++ ++ + K KA +F+ M +
Sbjct: 442 TLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQST 501
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P+ + Y +I N+ AR++F EL G V ++ C GL EA
Sbjct: 502 YLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEA 561
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
F N G P+ +Y ++ + + + + +L+ M + G V +
Sbjct: 562 LEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVAD 611
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 121/252 (48%), Gaps = 9/252 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS L+ + + A LF M GC+PD YN LI + KAK + +A F
Sbjct: 370 YSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYC----KAKRIGEAKQLF 425
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M +G+ P+IV+YN L+ Q + + + LFK + + PD+ TY+ ++D +
Sbjct: 426 NEMIHQGL---TPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGF 482
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G + + + M+S KP+++ +N+LID+ K + + ++F L +P +
Sbjct: 483 CKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNV 542
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
+ ++I K L +A F+ M P+ +Y II + + SRA ++ E
Sbjct: 543 QIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGE 602
Query: 386 LSKLGKDMKVST 397
+ + G V+T
Sbjct: 603 MREKGFVADVAT 614
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 135/293 (46%), Gaps = 11/293 (3%)
Query: 192 HTRDKA--KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV-DQVNALFKELHE 248
H D + + + AL YF M + +P I+ +N LL A + R+ D V +L K++
Sbjct: 92 HQNDASSFRNIDDALAYFNHML-HRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMEL 150
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
+ L+PD YT + +++ + + + SVL+++ + I+TFN LI+ K F +
Sbjct: 151 AGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQ 210
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
++F ++ +P + T+ ++I K A +F+KM P +TY II
Sbjct: 211 AVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIID 270
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
V+ A +IF + G + T N++++ C EA + ++ + P
Sbjct: 271 SLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMP 330
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
+ T+ LL + K + +LK M + G+ PN + T+SS + G
Sbjct: 331 NIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPN-------VVTYSSLMNG 376
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 154/322 (47%), Gaps = 12/322 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D IY+ +I K G A+ LF M G R D YN+L+T + ++ A
Sbjct: 173 DVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDA---- 228
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ M PN++T+ L+ A + + ++E+ + PD++TYN ++
Sbjct: 229 -ARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIH 287
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+G + E + +L M + C PD++T+N LI+ + K + D+ ++ + +
Sbjct: 288 GLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVV 347
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRARE 381
TFN++I Y +A A+ +F +M + P+ TY I +YG C N V +A
Sbjct: 348 DTVTFNTIIQGYFQAGRPDAAQEIFSRMGS---RPNIRTYS--ILLYGLCYNWRVEKALV 402
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+F+ + K ++ ++T N ++ CM G +A LF + G+ PD TY + +
Sbjct: 403 LFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFC 462
Query: 442 KANMKELVQKLLKRMEQNGIVP 463
+ + + L ++M+++G++P
Sbjct: 463 RKRLWDKADFLYRKMQEDGLLP 484
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 136/308 (44%), Gaps = 11/308 (3%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCK--PNIV 221
A+ LF M S RP PS+ + L K+K + F M E C ++
Sbjct: 53 AIDLFCNMIQS--RPLPSIVE--FSKLLSNIAKSKNYDLVISLFHNM---EICGIGHDLY 105
Query: 222 TYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSR 280
TYNI++ C +R V ++ + K + PD+ T + +++ + + + ++S+
Sbjct: 106 TYNIVINCLCRCSRFVIALSVVGKMMKFG-YEPDVVTVSSLINGFCQGNRVFGAVDLVSK 164
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
M+ +CK D++ +N +ID + K + +F + + T+NS++ +
Sbjct: 165 MEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGR 224
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
+ A + + M P+ IT+ +I + A++ ++E+ + D V T N+
Sbjct: 225 RSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNS 284
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
M+ CM+G EA + + G PD TY L + K + KL++ M Q G
Sbjct: 285 MIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRG 344
Query: 461 IVPNKRFF 468
+V + F
Sbjct: 345 LVVDTVTF 352
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 133/321 (41%), Gaps = 12/321 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+SKL++ + K L + LF M G D YN +I AL+ +G
Sbjct: 72 FSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALS-VVGKM 130
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K G E P++VT + L+ Q V L ++ E D+ YN ++D + K
Sbjct: 131 MKF-GYE---PDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCK 186
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G++ + RM+ + + D +T+N L+ ++ + ++ P + T
Sbjct: 187 TGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVIT 246
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDE 385
F ++I + + +A+ +++M P TY +I +G C V A++I D
Sbjct: 247 FTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMI--HGLCMHGQVDEAKQILDL 304
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ G V T N ++ +C E L G+ D+ T+ + + Y +A
Sbjct: 305 MVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGR 364
Query: 446 KELVQKLLKRMEQNGIVPNKR 466
+ Q++ RM G PN R
Sbjct: 365 PDAAQEIFSRM---GSRPNIR 382
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 79/188 (42%)
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P I+ F+ L+ + K + +D + +F ++ L T+N +I + A V
Sbjct: 67 PSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSV 126
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
KM Y P +T +I + + V A ++ ++ ++ + V N +++ +C
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCK 186
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
GL A +LF GV D+ TY L + + +L++ M IVPN
Sbjct: 187 TGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVIT 246
Query: 468 FLEALETF 475
F + F
Sbjct: 247 FTALINAF 254
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 100/233 (42%), Gaps = 6/233 (2%)
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
N+D+ LF + +S P I ++ ++ K+ + S+ M+ D+ T+N
Sbjct: 49 NLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYN 108
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA-RLQGKAEYVFQKMTA 353
++I+ + F V +M +P + T +S+I + + R+ G + V KM
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLV-SKMEE 167
Query: 354 MKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
M+ + Y II G+C V+ A +F + + G T N+++ C +G
Sbjct: 168 MRCKLDVVIYNTIID--GFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRR 225
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
++A L + + P+ T+ L A+ + +K + M + I P+
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPD 278
>gi|449440748|ref|XP_004138146.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Cucumis sativus]
Length = 874
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 159/330 (48%), Gaps = 5/330 (1%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L + D L F W+++ + D Y+ +I ++G+ Q L +M GC+P
Sbjct: 353 LKRVDDHAVALGFFYWLKRLPRFRHDGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQP 412
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
+ YN +I H+ +A L A+ F++M+ C+P+ VTY L+ A++ +D
Sbjct: 413 NVVTYNRII----HSYGRANYLQDAVNVFKQMQ-EAGCEPDRVTYCTLIDIHAKSGFLDV 467
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+++++ ++ L PD +TY+ +++ GK G + + RM C P+++T+N++I
Sbjct: 468 AMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLFCRMVDEGCVPNLVTYNIMIA 527
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
K + ++ ++++ + S +P T+ ++ G +AE +F +M + P
Sbjct: 528 LQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQKKNWVP 587
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
Y ++ ++G NV +A E + + K G V T N++L A+ ++A L
Sbjct: 588 DEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNSLLSAFLRVHQLSDAYQLL 647
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
++ G+ P TY LL T A ++
Sbjct: 648 QSMLTFGLKPSLQTYTLLLSCCTDAQTNDM 677
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 160/361 (44%), Gaps = 45/361 (12%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ G+++ + VF+ MQ+ D Y LI + K G +AM ++ +M+++
Sbjct: 420 IIHSYGRANYLQDAVNVFKQMQEAGCE-PDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDA 478
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G PD Y+ +I KA L A F +M E C PN+VTYNI++ A+AR
Sbjct: 479 GLTPDTFTYSVMINC----LGKAGHLNAAHRLFCRMVD-EGCVPNLVTYNIMIALQAKAR 533
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
N + L++++ +S PD TY VM+ G G ++E E + M+ PD +
Sbjct: 534 NYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQKKNWVPDEPVYG 593
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
LL+D +GK K + + +++ + KP +PT NS++ + + A + Q M
Sbjct: 594 LLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNSLLSAFLRVHQLSDAYQLLQSMLTF 653
Query: 355 KYTPSFITYECIITM--------YGYCDNVSR-------------------AREIFDELS 387
PS TY +++ G+C + + + + D +S
Sbjct: 654 GLKPSLQTYTLLLSCCTDAQTNDMGFCCELMQVTGHPAHTFLVSLPSAGPNGQNVRDHMS 713
Query: 388 KL-------GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD-----SSTYKL 435
K ++ K ++A+++ +GL EA ++E + V PD SS Y L
Sbjct: 714 KFLDLMHSEDRESKRGLVDAVVDFLHKSGLKEEAGCVWEAAMQKNVYPDAVKEKSSCYWL 773
Query: 436 L 436
+
Sbjct: 774 I 774
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 121/264 (45%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
A ALG+F +K + R + + TY ++ +A+ +N L ++ + P++ TYN
Sbjct: 360 AVALGFFYWLKRLPRFRHDGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNR 419
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ +YG+ +++ +V +M+ C+PD +T+ LID + K D +++ + +
Sbjct: 420 IIHSYGRANYLQDAVNVFKQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAG 479
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P T++ MI GKA A +F +M P+ +TY +I + N A
Sbjct: 480 LTPDTFTYSVMINCLGKAGHLNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKARNYEIAL 539
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+++ ++ + G + T ++E G EA+ +F PD Y LL +
Sbjct: 540 KLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQKKNWVPDEPVYGLLVDLW 599
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
K+ + + M + G+ PN
Sbjct: 600 GKSGNVQKAWEWYHAMLKAGLKPN 623
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 110/251 (43%), Gaps = 12/251 (4%)
Query: 236 VDQVNALFKELHESILAPD-IYTYNGVMDAYGKNGMIKEMES---------VLSRMKSNQ 285
V+ V+ + ++L A + I N +DAY N ++K ++ L R+ +
Sbjct: 317 VESVSCILQQLKWGPAAEEAIGKLNCSIDAYQANQILKRVDDHAVALGFFYWLKRLP--R 374
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
+ D T+ +I G+ + F + ++ ++ +P + T+N +I +YG+A A
Sbjct: 375 FRHDGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAV 434
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
VF++M P +TY +I ++ + A +++++ G T + M+
Sbjct: 435 NVFKQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCL 494
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
G A LF + G P+ TY ++ KA E+ KL + M+Q+G P+K
Sbjct: 495 GKAGHLNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDK 554
Query: 466 RFFLEALETFS 476
+ +E
Sbjct: 555 VTYCIVMEVLG 565
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 174/401 (43%), Gaps = 38/401 (9%)
Query: 98 RTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGK 157
+ LN + E FLLFEE+ K+ +AD Y+ ++ K
Sbjct: 488 KVLNYLCNASKMELAFLLFEEM-----------------KRGGLVADVYTYTIMVDSFCK 530
Query: 158 KGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCK 217
G A F+EMR GC P+ Y ALI A+L KAK ++ A F+ M E C
Sbjct: 531 AGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL----KAKKVSYANELFETMLS-EGCL 585
Query: 218 PNIVTYNILL----------RAC------AQARNVDQVNALFKELHESILAPDIYTYNGV 261
PNIVTY+ L+ +AC +++V V+ FK+ ++ P++ TY +
Sbjct: 586 PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGAL 645
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+D + K+ ++E +L M C+P+ I ++ LID K D+ ++V +
Sbjct: 646 LDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 705
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
TL T++S+I Y K + Q A V KM P+ + Y +I A +
Sbjct: 706 PATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYK 765
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ + + G V T AM++ + M G L E + GV P+ TY++L
Sbjct: 766 LMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCC 825
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGS 482
K ++ LL+ M+Q + + + +E F+ S
Sbjct: 826 KNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIES 866
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 161/402 (40%), Gaps = 59/402 (14%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+C V M + Y I++ L+ G A L +M G P VYN L
Sbjct: 355 RCKRVLNMMMMEGCY-PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 413
Query: 187 ITAHLHTRDK-------------------------------------AKALAKALGYFQK 209
I + +D A KA ++
Sbjct: 414 IGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 473
Query: 210 MKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG 269
M G + P+ TY+ +L A ++ LF+E+ L D+YTY ++D++ K G
Sbjct: 474 MIG-QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAG 532
Query: 270 MIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFN 329
+I++ + M+ C P+++T+ LI +Y K + ++F++++ P + T++
Sbjct: 533 LIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYS 592
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYT----------------PSFITYECIITMYGYC 373
++I + KA KA +F++M K P+ +TY ++ G+C
Sbjct: 593 ALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLD--GFC 650
Query: 374 DN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ V AR++ D +S G + +A+++ C G EA + G
Sbjct: 651 KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLY 710
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
TY L Y K ++L K+L +M +N PN + E ++
Sbjct: 711 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMID 752
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/388 (18%), Positives = 157/388 (40%), Gaps = 43/388 (11%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
+ F W +Q Y +Y+ L+ ++ + ++ ++R+ D V+ +
Sbjct: 149 ISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDD----DKEVFGEFLN 204
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
+ + + + AL ++K R +P+ TYN L++A +A +D + + +E+
Sbjct: 205 VLVRKHCRNGSFSIALEELGRLKDF-RFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 249 SIL--------------------------------APDIYTYNGVMDAYGKNGMIKEMES 276
+ L PD Y ++ + + +E
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMD 323
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
L+RM++ C P+++T++ L+ ++ + ++V +M P+ FNS++ Y
Sbjct: 324 FLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYC 383
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECII-TMYG-----YCDNVSRAREIFDELSKLG 390
+ A + +KM + P ++ Y +I ++ G CD + A + + E+ G
Sbjct: 384 TSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAG 443
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
+ +++ C G +A + G PD+STY + A+ EL
Sbjct: 444 VVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAF 503
Query: 451 KLLKRMEQNGIVPNKRFFLEALETFSSS 478
L + M++ G+V + + +++F +
Sbjct: 504 LLFEEMKRGGLVADVYTYTIMVDSFCKA 531
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 152/359 (42%), Gaps = 29/359 (8%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L K KW + L + + ++ DT Y+KLI+ + + AM + MR + C P
Sbjct: 280 LCKVGKWREALT----LVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQK---MKGMERCKPNIVTYNILLRACAQARN 235
+ Y+ L+ L+ K LG ++ M ME C P+ +N L+ A + +
Sbjct: 336 NVVTYSTLLCGCLNK--------KQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGD 387
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKN------GMIKEMESVLSRMKSNQC--- 286
L K++ + P YN ++ + + ++ E S M +
Sbjct: 388 HSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLN 447
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY-GKARLQGKAE 345
K ++ +F + S GK ++K V + ++ P T+ S ++NY A A
Sbjct: 448 KINVSSFTRCLCSAGK---YEKAFSVIREMIGQGFIPDTSTY-SKVLNYLCNASKMELAF 503
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+F++M TY ++ + + +AR+ F+E+ ++G V T A++ AY
Sbjct: 504 LLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAY 563
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ A+ LFE + G P+ TY L + KA E ++ +RM + VP+
Sbjct: 564 LKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD 622
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 129/321 (40%), Gaps = 52/321 (16%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK---AKALAKA 203
+Y LI + K G+ A + +EM G Y++LI + + + +K L+K
Sbjct: 676 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L C PN+V Y ++ + D+ L + + E P++ TY ++D
Sbjct: 736 LE--------NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD-------KMEQ----- 311
+G G I+ +L RM S P+ +T+ +LID K A D +M+Q
Sbjct: 788 GFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 847
Query: 312 ---------------------VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
+ + P L + +I N KA+ A + ++
Sbjct: 848 HTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE 907
Query: 351 M-----TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+ T + Y+ TY +I + V A ++F E++K G ++ + ++++
Sbjct: 908 VATFSATLVDYSS---TYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGL 964
Query: 406 CMNGLPTEADLLFENSHNMGV 426
N +EA LL + +M +
Sbjct: 965 FRNSKISEALLLLDFISHMEI 985
>gi|449477323|ref|XP_004154991.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g18900-like [Cucumis sativus]
Length = 874
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 159/330 (48%), Gaps = 5/330 (1%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L + D L F W+++ + D Y+ +I ++G+ Q L +M GC+P
Sbjct: 353 LKRVDDHAVALGFFYWLKRLPRFRHDGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQP 412
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
+ YN +I H+ +A L A+ F++M+ C+P+ VTY L+ A++ +D
Sbjct: 413 NVVTYNRII----HSYGRANYLQDAVNVFKQMQ-EAGCEPDRVTYCTLIDIHAKSGFLDV 467
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+++++ ++ L PD +TY+ +++ GK G + + RM C P+++T+N++I
Sbjct: 468 AMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLFCRMVDEGCVPNLVTYNIMIA 527
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
K + ++ ++++ + S +P T+ ++ G +AE +F +M + P
Sbjct: 528 LQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQKKNWVP 587
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
Y ++ ++G NV +A E + + K G V T N++L A+ ++A L
Sbjct: 588 DEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNSLLSAFLRVHQLSDAYQLL 647
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
++ G+ P TY LL T A ++
Sbjct: 648 QSMLTFGLKPSLQTYTLLLSCCTDAQTNDM 677
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 159/361 (44%), Gaps = 45/361 (12%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ G+++ + VF+ MQ+ D Y LI + K G +AM ++ +M+++
Sbjct: 420 IIHSYGRANYLQDAVNVFKQMQEAGCE-PDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDA 478
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G PD Y+ +I KA L A F +M E C PN+VTYNI++ A+AR
Sbjct: 479 GLTPDTFTYSVMINC----LGKAGHLNAAHRLFCRMVD-EGCVPNLVTYNIMIALQAKAR 533
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
N + L++++ +S PD TY VM+ G G ++E E + M+ PD +
Sbjct: 534 NYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQKKNWVPDEPVYG 593
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
LL+D +GK K + + +++ + KP +PT NS++ + + A + Q M
Sbjct: 594 LLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNSLLSAFLRVHQLSDAYQLLQSMLTF 653
Query: 355 KYTPSFITYECIITM--------YGYCDNV-------------------SRAREIFDELS 387
PS TY +++ G+C + + + D +S
Sbjct: 654 GLKPSLQTYTLLLSCCTDAQTNDMGFCCELMQVTGHPAHTFLVSLPSAGPNGQNVRDHMS 713
Query: 388 KL-------GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD-----SSTYKL 435
K ++ K ++A+++ +GL EA ++E + V PD SS Y L
Sbjct: 714 KFLDLMHSEDRESKRGLVDAVVDFLHKSGLKEEAGCVWEAAMQKNVYPDAVKEKSSCYWL 773
Query: 436 L 436
+
Sbjct: 774 I 774
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 121/264 (45%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
A ALG+F +K + R + + TY ++ +A+ +N L ++ + P++ TYN
Sbjct: 360 AVALGFFYWLKRLPRFRHDGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNR 419
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ +YG+ +++ +V +M+ C+PD +T+ LID + K D +++ + +
Sbjct: 420 IIHSYGRANYLQDAVNVFKQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAG 479
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P T++ MI GKA A +F +M P+ +TY +I + N A
Sbjct: 480 LTPDTFTYSVMINCLGKAGHLNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKARNYEIAL 539
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+++ ++ + G + T ++E G EA+ +F PD Y LL +
Sbjct: 540 KLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQKKNWVPDEPVYGLLVDLW 599
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
K+ + + M + G+ PN
Sbjct: 600 GKSGNVQKAWEWYHAMLKAGLKPN 623
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 110/251 (43%), Gaps = 12/251 (4%)
Query: 236 VDQVNALFKELHESILAPD-IYTYNGVMDAYGKNGMIKEMES---------VLSRMKSNQ 285
V+ V+ + ++L A + I N +DAY N ++K ++ L R+ +
Sbjct: 317 VESVSCILQQLKWGPAAEEAIGKLNCSIDAYQANQILKRVDDHAVALGFFYWLKRLP--R 374
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
+ D T+ +I G+ + F + ++ ++ +P + T+N +I +YG+A A
Sbjct: 375 FRHDGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAV 434
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
VF++M P +TY +I ++ + A +++++ G T + M+
Sbjct: 435 NVFKQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCL 494
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
G A LF + G P+ TY ++ KA E+ KL + M+Q+G P+K
Sbjct: 495 GKAGHLNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDK 554
Query: 466 RFFLEALETFS 476
+ +E
Sbjct: 555 VTYCIVMEVLG 565
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 165/361 (45%), Gaps = 22/361 (6%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + D+ L +F M + Y + IY+ +I + K Q A+ L + M
Sbjct: 157 LLNGFCRGDRIYDALYMFDRMVEMG-YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVD 215
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCK------PNIVTYNILLR 228
G RPD YN+LI+ ++ G + M C P++ T+N L+
Sbjct: 216 GIRPDAVTYNSLISGLCNS-----------GRWDDATRMVSCMTKREIYPDVFTFNALID 264
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
AC + + + L++E+ L PDI TY+ ++ + E E + M S C P
Sbjct: 265 ACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFP 324
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
D++T+++LI+ Y K + + ++F + T+ +I Y +A AE +F
Sbjct: 325 DVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIF 384
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+ M P+ ITY + ++G CDN + +A I ++ K G D + T N ++ C
Sbjct: 385 KWMVFCGVPPNIITYN--VLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMC 442
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
G +A L+ + + G+TPD TY + K ++ L ++M+++GI+PN+
Sbjct: 443 KAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPNEC 502
Query: 467 F 467
+
Sbjct: 503 Y 503
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 145/334 (43%), Gaps = 10/334 (2%)
Query: 131 VFRWMQKQRWYIA-DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
++ W Q Q I + + L+ + Q LA+ +M G PD + +L+
Sbjct: 101 IYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNG 160
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ + AL F +M M +PN+V YN ++ +++ VD L +
Sbjct: 161 FC----RGDRIYDALYMFDRMVEMGY-EPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVD 215
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+ PD TYN ++ +G + ++S M + PD+ TFN LID+ K +
Sbjct: 216 GIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEA 275
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
E++++ ++ P + T++ +I +AE +F M + P +TY +I
Sbjct: 276 EELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILIN- 334
Query: 370 YGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
GYC + V ++F E+S+ G T +++ YC G A+ +F+ GV
Sbjct: 335 -GYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVP 393
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
P+ TY +L E +L M+++G+
Sbjct: 394 PNIITYNVLLHGLCDNGKIEKALVILADMQKSGM 427
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 147/325 (45%), Gaps = 12/325 (3%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
IAD +S+L++ + K + + ++L+ +M+ G + N L+ + L+
Sbjct: 81 IAD---FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC----RCSQLS 133
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
AL + KM + +P+IVT+ LL + + +F + E P++ YN +
Sbjct: 134 LALSFLGKMMKLGH-EPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTI 192
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+D K+ + +L+RM+ + +PD +T+N LI +D ++ + +
Sbjct: 193 IDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREI 252
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRA 379
P + TFN++I K +AE ++++M P +TY +I YG C + A
Sbjct: 253 YPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLI--YGLCMYSRLDEA 310
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
++F + G V T + ++ YC + LF GV ++ TY +L +
Sbjct: 311 EQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQG 370
Query: 440 YTKANMKELVQKLLKRMEQNGIVPN 464
Y +A + +++ K M G+ PN
Sbjct: 371 YCRAGKLNVAEEIFKWMVFCGVPPN 395
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 122/291 (41%), Gaps = 41/291 (14%)
Query: 213 MERCKP--NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
M +C+P +I ++ LL A ++ + D V L++++ + ++ T N +++ + +
Sbjct: 72 MVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQ 131
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
+ S L +M +PDI+TF L++ + + +F ++ +P + +N+
Sbjct: 132 LSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNT 191
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--------------- 375
+I K++ A + +M P +TY +I+ G C++
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLIS--GLCNSGRWDDATRMVSCMTK 249
Query: 376 ----------------------VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
+S A E+++E+ + D + T + ++ CM E
Sbjct: 250 REIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDE 309
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A+ +F + G PD TY +L Y K+ E KL M Q G+V N
Sbjct: 310 AEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 81/192 (42%), Gaps = 7/192 (3%)
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
D +F ++ + P++ F+ ++ K + Y++++M + + T
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
++ + C +S A ++ KLG + + T ++L +C +A +F+ MG
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMG 181
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSG 485
P+ Y + K+ + LL RME +GI P+ T++S ++G +
Sbjct: 182 YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDA-------VTYNSLISGLCNS 234
Query: 486 SAKTDLTRSLST 497
D TR +S
Sbjct: 235 GRWDDATRMVSC 246
>gi|357123530|ref|XP_003563463.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Brachypodium distachyon]
Length = 862
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/484 (22%), Positives = 192/484 (39%), Gaps = 83/484 (17%)
Query: 68 SKRGRKSEELESKELVRVLMRSFSDKEP---LVRTLNKYVKVVRSEHCFLLFEELGKSDK 124
+RG+ S E++S L+ S+ P + R L + + ++ E +
Sbjct: 59 GERGKYSYEVDS------LIDRLSNLAPRGSIARCLETARHRLTLQDFAAVYREFSRRGD 112
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRL--------------------- 163
W + + +F++MQ+Q W D I++ +I V+G++G L
Sbjct: 113 WQRSVRLFKYMQRQSWCRPDEHIHAIVIGVLGRQGPALLDKCLEVFHDLPADSRTALSYT 172
Query: 164 --------------AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQK 209
A L +M+ +G P + YN ++ A D LG F +
Sbjct: 173 SLIAAYARNALHEEARALLDQMKAAGVAPTAATYNTVLAACARATDPPVPFDMLLGLFAE 232
Query: 210 MKG--MERCKPNIVTYNILLRACA-----------------------------------Q 232
M+ +P++ TYN LL A A +
Sbjct: 233 MRHDVSPAVRPDLTTYNTLLAAAAVRSLNDQAEMLLRAMLEAGVLPDTASYRHIVDAFAR 292
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
A ++ +V LF+E+ ++ PD Y G+M+A+ + G E +VL +M+++ C P T
Sbjct: 293 AGDLSRVAELFREMADTGHTPDPSAYLGLMEAHTRVGATAEAVAVLRQMQADGCAPTAAT 352
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+ +L+D YG++ FD + ++F+ M + P T+N + +G + +F M
Sbjct: 353 YRVLLDLYGRQGRFDGVRELFRE-MRTAVPPDTATYNVLFSVFGDGGFFKEVVELFHDML 411
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
P T E ++ G ARE+ D ++K G ++EA +
Sbjct: 412 RTGIEPDMETCEGVLVACGQGGLHEDAREVLDYITKEGMVPTAKAYTGLVEALGHAAMYE 471
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN-GIVPNKRFFLEA 471
EA + F +G P TY L + K + + + + RM + GI NK F
Sbjct: 472 EAYVAFNMMTEIGSLPTIETYNSLANVFAKGGLFQEAESIFSRMTNSAGIQKNKDSFDAL 531
Query: 472 LETF 475
+E +
Sbjct: 532 IEAY 535
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 138/324 (42%), Gaps = 7/324 (2%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ DT Y ++ + G LF EM ++G PDPS Y L+ AH + A A
Sbjct: 277 LPDTASYRHIVDAFARAGDLSRVAELFREMADTGHTPDPSAYLGLMEAHT----RVGATA 332
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+A+ ++M+ + C P TY +LL + D V LF+E+ ++ PD TYN +
Sbjct: 333 EAVAVLRQMQA-DGCAPTAATYRVLLDLYGRQGRFDGVRELFREMRTAV-PPDTATYNVL 390
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+G G KE+ + M +PD+ T ++ + G+ + +V +
Sbjct: 391 FSVFGDGGFFKEVVELFHDMLRTGIEPDMETCEGVLVACGQGGLHEDAREVLDYITKEGM 450
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
PT + ++ G A + +A F MT + P+ TY + ++ A
Sbjct: 451 VPTAKAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNSLANVFAKGGLFQEAES 510
Query: 382 IFDELSK-LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
IF ++ G + +A++EAYC +A + PD + + + AY
Sbjct: 511 IFSRMTNSAGIQKNKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLNAY 570
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
A + + ++ + ++ N VP+
Sbjct: 571 CIAGVIDESKEQFEEIQSNMAVPS 594
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 147/359 (40%), Gaps = 52/359 (14%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + G+ ++ E+FR M+ DT Y+ L +V G G + + LF +M
Sbjct: 355 VLLDLYGRQGRFDGVRELFREMRTA--VPPDTATYNVLFSVFGDGGFFKEVVELFHDMLR 412
Query: 174 SGCRPDPSVYNALITA----HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA 229
+G PD ++ A LH + + L Y K +GM P Y L+ A
Sbjct: 413 TGIEPDMETCEGVLVACGQGGLHEDAR-----EVLDYITK-EGM---VPTAKAYTGLVEA 463
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKP 288
A ++ F + E P I TYN + + + K G+ +E ES+ SRM S +
Sbjct: 464 LGHAAMYEEAYVAFNMMTEIGSLPTIETYNSLANVFAKGGLFQEAESIFSRMTNSAGIQK 523
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
+ +F+ LI++Y + D + + + S+ P + ++ Y A + +++ F
Sbjct: 524 NKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQF 583
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL---------------------- 386
+++ + PS I Y ++++Y D + A ++ +E+
Sbjct: 584 EEIQSNMAVPSIIAYCMMLSLYARNDRWADAYDLLEEMKTNRASSTHQVIASMIQGEYDD 643
Query: 387 -------------SKL-GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
S L G D + NA+L+ G A + +++ N G+ P+ S
Sbjct: 644 SSNWQMVEYALDSSNLEGCDYSLRFFNALLDVLWWFGQKARAARVLDHAVNSGLFPELS 702
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 166/377 (44%), Gaps = 38/377 (10%)
Query: 98 RTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGK 157
+ LN + E FLLFEE+ K+ +AD Y+ ++ K
Sbjct: 488 KVLNYLCNASKMELAFLLFEEM-----------------KRGGLVADVYTYTIMVDSFCK 530
Query: 158 KGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCK 217
G A F+EMR GC P+ Y ALI A+L KAK ++ A F+ M E C
Sbjct: 531 AGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL----KAKKVSYANELFETMLS-EGCL 585
Query: 218 PNIVTYNILL----------RAC------AQARNVDQVNALFKELHESILAPDIYTYNGV 261
PNIVTY+ L+ +AC +++V V+ FK+ ++ P++ TY +
Sbjct: 586 PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGAL 645
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+D + K+ ++E +L M C+P+ I ++ LID K D+ ++V +
Sbjct: 646 LDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 705
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
TL T++S+I Y K + Q A V KM P+ + Y +I A +
Sbjct: 706 PATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYK 765
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ + + G V T AM++ + M G L E + GV P+ TY++L
Sbjct: 766 LMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCC 825
Query: 442 KANMKELVQKLLKRMEQ 458
K ++ LL+ M+Q
Sbjct: 826 KNGALDVAHNLLEEMKQ 842
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 161/402 (40%), Gaps = 59/402 (14%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+C V M + Y I++ L+ G A L +M G P VYN L
Sbjct: 355 RCKRVLNMMMMEGCY-PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 413
Query: 187 ITAHLHTRDK-------------------------------------AKALAKALGYFQK 209
I + +D A KA ++
Sbjct: 414 IGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 473
Query: 210 MKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG 269
M G + P+ TY+ +L A ++ LF+E+ L D+YTY ++D++ K G
Sbjct: 474 MIG-QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAG 532
Query: 270 MIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFN 329
+I++ + M+ C P+++T+ LI +Y K + ++F++++ P + T++
Sbjct: 533 LIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYS 592
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYT----------------PSFITYECIITMYGYC 373
++I + KA KA +F++M K P+ +TY ++ G+C
Sbjct: 593 ALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLD--GFC 650
Query: 374 DN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ V AR++ D +S G + +A+++ C G EA + G
Sbjct: 651 KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLY 710
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
TY L Y K ++L K+L +M +N PN + E ++
Sbjct: 711 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMID 752
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/388 (18%), Positives = 157/388 (40%), Gaps = 43/388 (11%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
+ F W +Q Y +Y+ L+ ++ + ++ ++R+ D V+ +
Sbjct: 149 ISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDD----DKEVFGEFLN 204
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
+ + + + AL ++K R +P+ TYN L++A +A +D + + +E+
Sbjct: 205 VLVRKHCRNGSFSIALEELGRLKDF-RFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 249 SIL--------------------------------APDIYTYNGVMDAYGKNGMIKEMES 276
+ L PD Y ++ + + +E
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMD 323
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
L+RM++ C P+++T++ L+ ++ + ++V +M P+ FNS++ Y
Sbjct: 324 FLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYC 383
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECII-TMYG-----YCDNVSRAREIFDELSKLG 390
+ A + +KM + P ++ Y +I ++ G CD + A + + E+ G
Sbjct: 384 TSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAG 443
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
+ +++ C G +A + G PD+STY + A+ EL
Sbjct: 444 VVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAF 503
Query: 451 KLLKRMEQNGIVPNKRFFLEALETFSSS 478
L + M++ G+V + + +++F +
Sbjct: 504 LLFEEMKRGGLVADVYTYTIMVDSFCKA 531
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 152/359 (42%), Gaps = 29/359 (8%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L K KW + L + + ++ DT Y+KLI+ + + AM + MR + C P
Sbjct: 280 LCKVGKWREALT----LVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQK---MKGMERCKPNIVTYNILLRACAQARN 235
+ Y+ L+ L+ K LG ++ M ME C P+ +N L+ A + +
Sbjct: 336 NVVTYSTLLCGCLNK--------KQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGD 387
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKN------GMIKEMESVLSRMKSNQC--- 286
L K++ + P YN ++ + + ++ E S M +
Sbjct: 388 HSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLN 447
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY-GKARLQGKAE 345
K ++ +F + S GK ++K V + ++ P T+ S ++NY A A
Sbjct: 448 KINVSSFTRCLCSAGK---YEKAFSVIREMIGQGFIPDTSTY-SKVLNYLCNASKMELAF 503
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+F++M TY ++ + + +AR+ F+E+ ++G V T A++ AY
Sbjct: 504 LLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAY 563
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ A+ LFE + G P+ TY L + KA E ++ +RM + VP+
Sbjct: 564 LKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD 622
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 130/323 (40%), Gaps = 53/323 (16%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK---AKALAKA 203
+Y LI + K G+ A + +EM G Y++LI + + + +K L+K
Sbjct: 676 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 735
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L C PN+V Y ++ + D+ L + + E P++ TY ++D
Sbjct: 736 LE--------NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD-------KMEQ----- 311
+G G I+ +L RM S P+ +T+ +LID K A D +M+Q
Sbjct: 788 GFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 847
Query: 312 ---------------------VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
+ + P L + +I N KA+ A + ++
Sbjct: 848 HTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE 907
Query: 351 M-----TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+ T + Y+ TY +I + V A ++F E++K G ++ + ++++
Sbjct: 908 VATFSATLVDYSS---TYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGL 964
Query: 406 CMNGLPTEADLLFENSHNMGVTP 428
N +EA LL + +M V P
Sbjct: 965 FRNSKISEALLLLDFISHM-VCP 986
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 152/324 (46%), Gaps = 12/324 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + K G T A+ L M C+PD VY ++I + K + + +A F
Sbjct: 177 YGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLC----KDRQVTEAFNLF 232
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
KM G + P+I TY L+ + V L ++ S + PD+ ++ V+DA K
Sbjct: 233 SKMVG-QGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCK 291
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G I E V+ M +P+++T+N L+D + + D+ +VF +++H+ P + +
Sbjct: 292 EGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVIS 351
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE---IFD 384
+N++I Y K + KA Y+F++M + P+ +TY T+ C +V R ++ +F
Sbjct: 352 YNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYN---TLMHXC-HVGRLQDAIALFH 407
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E+ G+ ++T +L+ C EA L + + PD Y ++ +A
Sbjct: 408 EMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAG 467
Query: 445 MKELVQKLLKRMEQNGIVPNKRFF 468
E + + + G+ PN R +
Sbjct: 468 ELEAARDIFSNLSSKGLRPNVRTY 491
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 132/304 (43%), Gaps = 10/304 (3%)
Query: 163 LAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVT 222
A + +++ G +PD + + LI L K + AL F KM G E +PN+VT
Sbjct: 122 FAFSVLAKILKLGHQPDTATFTTLIRG-LCVEGK---IGDALHLFDKMIG-EGFQPNVVT 176
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y L+ + N + L + + + PD+ Y ++D+ K+ + E ++ S+M
Sbjct: 177 YGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMV 236
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
PDI T+ LI S + + + +++SK P + F++++ K
Sbjct: 237 GQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKIT 296
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNA 400
+A V M P+ +TY + M G+C + A ++FD + G V + N
Sbjct: 297 EAHDVVDMMIIRGVEPNVVTYNAL--MDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNT 354
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
++ YC +A LFE + P++ TY L +++ + L M +G
Sbjct: 355 LINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHVGRLQDAI-ALFHEMVAHG 413
Query: 461 IVPN 464
+P+
Sbjct: 414 QIPD 417
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 112/249 (44%), Gaps = 9/249 (3%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ ++VF M Y + Y+ LI K + A +LF EM P+ YN L
Sbjct: 332 EAVKVFDTM-VHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTL 390
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
+H + L A+ F +M + P++ TY ILL + ++D+ AL K +
Sbjct: 391 ----MHXCHVGR-LQDAIALFHEMVAHGQI-PDLATYRILLDYLCKKSHLDEAMALLKTI 444
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
S + PDI Y V+D + G ++ + S + S +P++ T+ ++I+ +R
Sbjct: 445 EGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLL 504
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
D+ ++F + + P T+N++ + + +A + Q+M A ++ T +
Sbjct: 505 DEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLL 564
Query: 367 ITMYGYCDN 375
+ M CD+
Sbjct: 565 VEM--LCDD 571
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/356 (18%), Positives = 134/356 (37%), Gaps = 72/356 (20%)
Query: 180 PSVYNALITAHLHTRD-KAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
P +++L H++ L AL F +M M P+ V +N LL + A+ +
Sbjct: 29 PPYFSSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHP-PPSTVDFNRLLTSIAKTKQYPT 87
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGK------------------------------- 267
V +L ++ + PD+YT N +++++
Sbjct: 88 VFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIR 147
Query: 268 ----NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
G I + + +M +P+++T+ LI+ K + ++ +S+ +P
Sbjct: 148 GLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQP 207
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII-TMYGYCD-------- 374
+ + S+I + K R +A +F KM +P TY +I ++ C+
Sbjct: 208 DVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLL 267
Query: 375 --------------------------NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
++ A ++ D + G + V T NA+++ +C+
Sbjct: 268 NQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQ 327
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA +F+ + G P+ +Y L Y K + L + M Q ++PN
Sbjct: 328 SEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPN 383
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 23/195 (11%)
Query: 100 LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG 159
+N Y K+ R + LFEE+ C Q+ I +T Y+ L+ G
Sbjct: 356 INGYCKIQRMDKATYLFEEM--------C---------QKELIPNTVTYNTLMHXC-HVG 397
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
+ + A+ LF EM G PD + Y L L K L +A+ + ++G P+
Sbjct: 398 RLQDAIALFHEMVAHGQIPDLATYRIL----LDYLCKKSHLDEAMALLKTIEG-SNMDPD 452
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
I Y I++ +A ++ +F L L P++ TY +++ + G++ E +
Sbjct: 453 IQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFM 512
Query: 280 RMKSNQCKPDIITFN 294
M N C PD T+N
Sbjct: 513 EMDGNGCSPDGCTYN 527
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 61/137 (44%), Gaps = 5/137 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D IY+ +I M + G+ A +FS + + G RP+ Y +I + L +A
Sbjct: 452 DIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLC----RRGLLDEA 507
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F +M G C P+ TYN + + Q + + L +E+ + D+ T +++
Sbjct: 508 NKLFMEMDG-NGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVE 566
Query: 264 AYGKNGMIKEMESVLSR 280
+ + + ++ +LS
Sbjct: 567 MLCDDKLDQSVKQILSE 583
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 173/376 (46%), Gaps = 26/376 (6%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM 171
C L L K+ + Q ++FR + + Y+ LI K G A L +EM
Sbjct: 72 CNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEM 131
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
+ G PD +++++ A +T + L++A+ YF++ C P+ V +NIL+
Sbjct: 132 KERGHSPDVVTHSSIVQALCNTGN----LSRAMQYFRESV---ECAPDSVLFNILVHGLC 184
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+A + + + +E+ E + PD+ TYN ++D K+ ++E +L M + +P+++
Sbjct: 185 KANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLV 244
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
T+N LI Y K Q+ + ++ S P + TFNS+I + + KA V M
Sbjct: 245 TYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLM 304
Query: 352 TAMKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
P+ +TY +I+ G CD + A E+ E+ G + T N+++ +C N
Sbjct: 305 KKGLCAPNLVTYNVLIS--GLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNF 362
Query: 410 LPTEA----DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+A +L+ E GV PD +Y L A K+ + LL M G +PN
Sbjct: 363 QIEQAFQIQNLMVER----GVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPN- 417
Query: 466 RFFLEALETFSSSLAG 481
L TF+S + G
Sbjct: 418 ------LFTFNSLMEG 427
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 111/237 (46%), Gaps = 7/237 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI K G T LA L M SG PD +N+LI+ K+K + KA
Sbjct: 246 YNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQ---KSK-IDKACEVL 301
Query: 208 QKMK-GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
MK G+ C PN+VTYN+L+ A ++ L E+ + PDI TYN ++ +
Sbjct: 302 HLMKKGL--CAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFC 359
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+N I++ + + M PD I++ L + K + FD+ + ++ + P L
Sbjct: 360 RNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLF 419
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
TFNS++ +R +A ++ M + P+ TYE ++T V A+E+
Sbjct: 420 TFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVL 476
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 88/206 (42%), Gaps = 5/206 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI+ + G+ A L SEM G PD YN+LI +A
Sbjct: 316 YNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQ-----I 370
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
Q + P+ ++Y L A ++ D+ AL + ++ P+++T+N +M+
Sbjct: 371 QNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCC 430
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ + E +L+ M+ C P T+ +L+ K D ++V ++ +P + +
Sbjct: 431 SRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSS 490
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTA 353
+++ + Q A + F ++ A
Sbjct: 491 SGTIVHTLAREGKQDLALHYFDQVVA 516
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 6/206 (2%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
R + D Y+ LI + + Q A + + M G PD Y L A L + +
Sbjct: 342 RGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDE 401
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
A A F PN+ T+N L+ +R +D+ L + P TY
Sbjct: 402 AFALLDNMFDAGA-----IPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTY 456
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
++ K G + + + VL M S +P + + ++ + + D F ++
Sbjct: 457 EVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVA 516
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKA 344
++ K P++ + + + K +GK+
Sbjct: 517 AESKACDPSYQKL-LEFVKVLREGKS 541
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 157/325 (48%), Gaps = 5/325 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +++ LI K+ + AM +FS+MR G P+ Y A+I K+ ++ A
Sbjct: 370 DHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILC----KSGSVDDA 425
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ YF++M E PNI+ Y L+ + D+ L E+ + + + +N ++
Sbjct: 426 MLYFEQMID-EGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIH 484
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
++ K G + E E + M KP++IT++ LID Y D+ ++ S+ KP
Sbjct: 485 SHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKP 544
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T+N++I Y + A +F++M + +P+ ITY I+ + + A+E++
Sbjct: 545 DCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELY 604
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
++K G +++ST N +L C N L EA +F+N + ++ T+ ++ A K
Sbjct: 605 VGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKV 664
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFF 468
+ + L + NG+VP+ R +
Sbjct: 665 GRNDEAKDLFAALSANGLVPDVRTY 689
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 162/351 (46%), Gaps = 12/351 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
F+E G SDK + M +R D YS +IA + K AM + + M +
Sbjct: 206 FFKE-GDSDKAYS---TYHEMLDRRIS-PDVVTYSSIIAALCKGQAMDKAMEVLTTMVKN 260
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLR-ACAQA 233
G P+ YN++ LH ++ +A+G+ +KM+ + +P++VTYN L+ C
Sbjct: 261 GVMPNCMTYNSI----LHGYCSSEQPKEAIGFLKKMRS-DGVEPDVVTYNSLMDYLCKNG 315
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
R+ + +F + + L PDI TY ++ Y G + EM ++L M N PD F
Sbjct: 316 RST-EARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVF 374
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N+LI +Y K++ D+ VF + P + T+ ++I K+ A F++M
Sbjct: 375 NILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMID 434
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
TP+ I Y +I D +A E+ E+ G + N+++ ++C G E
Sbjct: 435 EGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIE 494
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
++ LF+ +GV P+ TY L Y A + KLL M G+ P+
Sbjct: 495 SEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPD 545
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 139/320 (43%), Gaps = 7/320 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + G+ L + G R + + L+ + + A+ L
Sbjct: 90 YGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRM 149
Query: 208 QKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNAL--FKELHESILAPDIYTYNGVMDA 264
++ C P++ + ILL+ C + R+ + + L + APD+ +Y V++
Sbjct: 150 TELS----CMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVING 205
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ K G + S M + PD++T++ +I + K QA DK +V +++ + P
Sbjct: 206 FFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPN 265
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
T+NS++ Y + +A +KM + P +TY ++ + AR+IFD
Sbjct: 266 CMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFD 325
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
++K G + ++T +L+ Y G E L + G+ PD + +L AY K
Sbjct: 326 SMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQE 385
Query: 445 MKELVQKLLKRMEQNGIVPN 464
+ + +M Q+G+ PN
Sbjct: 386 KVDEAMLVFSKMRQHGLNPN 405
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 135/304 (44%), Gaps = 5/304 (1%)
Query: 165 MWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYN 224
+ + ++ R G PD Y +I D KA + Y + + R P++VTY+
Sbjct: 181 LHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYST---YHEMLD--RRISPDVVTYS 235
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
++ A + + +D+ + + ++ + P+ TYN ++ Y + KE L +M+S+
Sbjct: 236 SIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSD 295
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
+PD++T+N L+D K + ++F S+ +P + T+ +++ Y +
Sbjct: 296 GVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEM 355
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
+ M P + +I Y + V A +F ++ + G + V T A++
Sbjct: 356 HALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGI 415
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
C +G +A L FE + G+TP+ Y L + + + ++L+ M GI N
Sbjct: 416 LCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLN 475
Query: 465 KRFF 468
FF
Sbjct: 476 TIFF 479
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 123/256 (48%), Gaps = 12/256 (4%)
Query: 221 VTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+T+ LL+ CA R D ++ + + + E PD+++ ++ +E +L
Sbjct: 123 ITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLH 182
Query: 280 RMKSNQ---CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
M ++ PD++++ +I+ + K DK + ++ + P + T++S+I
Sbjct: 183 MMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALC 242
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL---GKDM 393
K + KA V M P+ +TY I ++GYC + + +E L K+ G +
Sbjct: 243 KGQAMDKAMEVLTTMVKNGVMPNCMTYNSI--LHGYCSS-EQPKEAIGFLKKMRSDGVEP 299
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY-TKANMKELVQKL 452
V T N++++ C NG TEA +F++ G+ PD +TY L + Y TK + E+ L
Sbjct: 300 DVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEM-HAL 358
Query: 453 LKRMEQNGIVPNKRFF 468
L M +NGI P+ F
Sbjct: 359 LDLMVRNGIHPDHHVF 374
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 117/284 (41%), Gaps = 8/284 (2%)
Query: 201 AKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
A A+ + +M G + P + TY IL+ C +A +D A + + + T+
Sbjct: 66 AAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITF 125
Query: 259 NGVMDAYGKNGMIKE-MESVLSRMKSNQCKPDIITFNLLI----DSYGKRQAFDKMEQVF 313
++ + + M+ VL RM C PD+ + +L+ D ++A + + +
Sbjct: 126 TPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMA 185
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
P + ++ ++I + K KA + +M + +P +TY II
Sbjct: 186 DD-RGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKG 244
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ +A E+ + K G T N++L YC + P EA + + GV PD TY
Sbjct: 245 QAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTY 304
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
L K +K+ M + G+ P+ + L+ +++
Sbjct: 305 NSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYAT 348
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 85/191 (44%), Gaps = 13/191 (6%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS LI G+ A L S M + G +PD YN LI + + + AL F
Sbjct: 514 YSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYC----RVSRMDDALALF 569
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M PNI+TYNI+L+ R L+ + +S ++ TYN ++ K
Sbjct: 570 KEMVS-SGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCK 628
Query: 268 NGMIKEMESVLSRMKSNQCKPDII----TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
N + E RM N C D+ TFN++I + K D+ + +F +L + P
Sbjct: 629 NNLTDEA----LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVP 684
Query: 324 TLPTFNSMIIN 334
+ T++ M N
Sbjct: 685 DVRTYSLMAEN 695
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 84/208 (40%), Gaps = 10/208 (4%)
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY-G 336
++R + + P + T+ +LI + D +++ + TF ++
Sbjct: 75 MARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCA 134
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV- 395
R + V ++MT + P + C I + G CD +R++E + L + D
Sbjct: 135 DKRTSDAMDIVLRRMTELSCMPD--VFSCTILLKGLCDE-NRSQEALELLHMMADDRGGG 191
Query: 396 STLNAMLEAYCMNGLPTEADL--LFENSHNM---GVTPDSSTYKLLYKAYTKANMKELVQ 450
S + + +NG E D + H M ++PD TY + A K +
Sbjct: 192 SAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAM 251
Query: 451 KLLKRMEQNGIVPNKRFFLEALETFSSS 478
++L M +NG++PN + L + SS
Sbjct: 252 EVLTTMVKNGVMPNCMTYNSILHGYCSS 279
>gi|297733858|emb|CBI15105.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 174/375 (46%), Gaps = 11/375 (2%)
Query: 88 RSFSDKEPLV-RTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTG 146
R D+ +V RT+N+ + L E GK ++ + E+ + M+ + D
Sbjct: 23 RGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSF-PDIT 81
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH-LHTR-DKAKALAKAL 204
Y+ L+ + G + AM +F +M+ +GC P+ + Y+ L+ + H R D + L
Sbjct: 82 SYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDL---- 137
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
F +MK + +PN TYNIL+ + +V LF ++ E + P++ TY G++ A
Sbjct: 138 --FLEMK-VSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFA 194
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
GK G+ ++ + +L M P + +I++YG+ +++ F ++ KPT
Sbjct: 195 CGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPT 254
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ T+NS+I + K L ++E + KM + T+ +I + A + +
Sbjct: 255 VETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYV 314
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E+ K D TL A+L YC GL E++ F +G+ P Y ++ Y KA+
Sbjct: 315 EMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAKAD 374
Query: 445 MKELVQKLLKRMEQN 459
+ +LL M N
Sbjct: 375 RWDDAHQLLDEMFTN 389
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 157/330 (47%), Gaps = 6/330 (1%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
AD Y+ L++ ++G A +F M G PD + Y+ L+ T K L K
Sbjct: 8 ADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLV----ETFGKLNRLEK 63
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
++M+ P+I +YN+LL A AQ+ ++ + +F+++ + P+ TY+ ++
Sbjct: 64 VSELLKEMESGGSF-PDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILL 122
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+ YG++G ++ + MK + +P+ T+N+LI+ +G+ F ++ +F ++ +
Sbjct: 123 NLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVE 182
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P + T+ +I GK L A+ + M PS Y +I YG A
Sbjct: 183 PNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVA 242
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
F+ ++++G V T N++++ + GL E++ + GV + T+ + +A+ +
Sbjct: 243 FNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQ 302
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
E K ME+ P+++ LEA+
Sbjct: 303 GGQFEEAIKAYVEMEKARCDPDEQ-TLEAV 331
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 146/307 (47%), Gaps = 9/307 (2%)
Query: 171 MRNSGCRPDPSVYNALITA--HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLR 228
MR+ G + D YN L++A D+A+ + + + + P+I TY+ L+
Sbjct: 1 MRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGIL-------PDITTYSYLVE 53
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
+ +++V+ L KE+ PDI +YN +++A+ ++G IKE V +M+ C P
Sbjct: 54 TFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVP 113
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
+ T+++L++ YG+ +D + +F + S +P T+N +I +G+ + +F
Sbjct: 114 NAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLF 173
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
M P+ TYE +I G A++I +++ G ++EAY
Sbjct: 174 HDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQA 233
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
L EA + F + +G P TY L + + K + + + +L +M Q+G+ N+ F
Sbjct: 234 ALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTF 293
Query: 469 LEALETF 475
+E F
Sbjct: 294 NGVIEAF 300
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 111/232 (47%), Gaps = 1/232 (0%)
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
HE I A DI TYN ++ A + G+ E E V M PDI T++ L++++GK
Sbjct: 3 HEGIQA-DIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRL 61
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+K+ ++ K + P + ++N ++ + ++ +A VF++M P+ TY +
Sbjct: 62 EKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSIL 121
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
+ +YG R++F E+ + +T N ++ + G E LF + V
Sbjct: 122 LNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENV 181
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
P+ TY+ L A K + E +K+L M + G+VP+ + + +E + +
Sbjct: 182 EPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQA 233
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/393 (20%), Positives = 147/393 (37%), Gaps = 89/393 (22%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L E +S + + VFR MQ + + YS L+ + G+ G+ LF EM+
Sbjct: 85 VLLEAHAQSGSIKEAMGVFRQMQGAG-CVPNAATYSILLNLYGRHGRYDDVRDLFLEMKV 143
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGM------ERCKPNIVTYNILL 227
S P+ + YN LI GYF+++ + E +PN+ TY L+
Sbjct: 144 SNTEPNAATYNILINVFGEG-----------GYFKEVVTLFHDMVEENVEPNMETYEGLI 192
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG--------------------- 266
AC + + + ++E + P Y GV++AYG
Sbjct: 193 FACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSK 252
Query: 267 --------------KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
K G+ KE E++L +M + + TFN +I+++ + F++ +
Sbjct: 253 PTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKA 312
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGY 372
+ + ++ P T +++ Y A L ++E F ++ A+ PS + Y ++ +Y
Sbjct: 313 YVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAK 372
Query: 373 CDNVSRAREIFDE------------------------------------LSKLGKDMKVS 396
D A ++ DE L G + V
Sbjct: 373 ADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDSNWQMVEYVFEKLKSEGCSLGVR 432
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
N +LEA G A + + G+ P+
Sbjct: 433 FYNTLLEALWWLGQKERATRVLNEATKRGLFPE 465
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 159/324 (49%), Gaps = 13/324 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ +I+ G A+ L EM+++G PD + +ITA + D L A
Sbjct: 111 DVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGD----LDGA 166
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ + + M C PN+VTY L+ A A+A+ +++ L +E+ E P++ TYN ++D
Sbjct: 167 MDHLRSMG----CDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVD 222
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
A K M+ + V+ +M P+++TFN L+D + KR D ++ ++ +P
Sbjct: 223 ALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRP 282
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRARE 381
+ T++++I K++ +A+ V ++M TP TY +I +G C D + A +
Sbjct: 283 NVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALI--HGLCKADKIEEAEQ 340
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ ++ G V ++++ A+C +G EA + +PD TY +
Sbjct: 341 MLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLC 400
Query: 442 KANMKELVQKLLKRMEQNG-IVPN 464
K Q +L++M+++G ++P+
Sbjct: 401 KLGKIAEAQVILEQMQESGDVLPD 424
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 158/346 (45%), Gaps = 44/346 (12%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + L KS K+L+ EV M K R D YS LI + K + A + M S
Sbjct: 290 LIDGLCKSQKFLEAKEVLEEM-KTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGS 348
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC PD VY+++I H K+ L +A Q+M+ +R P++VTYN ++ +
Sbjct: 349 GCTPDVVVYSSII----HAFCKSGKLLEAQKTLQEMR-KQRKSPDVVTYNTVIDGLCKLG 403
Query: 235 NVDQVNALFKELHES-ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ + + +++ ES + PD+ TY+ V++ K+ M+ E + +L RM C PD++T+
Sbjct: 404 KIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTY 463
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+ID K RL+ +AEY+ Q M
Sbjct: 464 TTIIDGLCK----------------------------------CGRLE-EAEYLLQGMKR 488
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P+ +TY +I+ V A + +E+ G + T N M+ C++G E
Sbjct: 489 AGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKE 548
Query: 414 ADLLFENSHN--MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
A L + + +PD++TY+ + A +++ + ++LL++M+
Sbjct: 549 AQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMK 594
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 155/351 (44%), Gaps = 37/351 (10%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA--HLHTRDKAKALAKAL- 204
Y+ LIA + + AM L EMR GC P+ YN L+ A L A+ + K +
Sbjct: 182 YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 241
Query: 205 ----------------GYFQK--------------MKGMERCKPNIVTYNILLRACAQAR 234
G+ ++ KGM +PN+VTY+ L+ +++
Sbjct: 242 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGM---RPNVVTYSALIDGLCKSQ 298
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ + +E+ + PD +TY+ ++ K I+E E +L RM + C PD++ ++
Sbjct: 299 KFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYS 358
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT-A 353
+I ++ K + ++ + + ++ P + T+N++I K +A+ + ++M +
Sbjct: 359 SIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQES 418
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P +TY +I D + A+++ D + K G + V T +++ C G E
Sbjct: 419 GDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEE 478
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A+ L + G P+ TY L KA + +++++ M G PN
Sbjct: 479 AEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPN 529
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 134/268 (50%), Gaps = 13/268 (4%)
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
C+P++ +YNI++ A ++ L +E+ + APD +T+ ++ A G +++
Sbjct: 108 CEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAG---DLD 164
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK---PTLPTFNSMI 332
+ ++S C P+++T+ LI ++ + + K+E+ K L +E+ P L T+N ++
Sbjct: 165 GAMDHLRSMGCDPNVVTYTALIAAFARAK---KLEEAMKLLEEMRERGCPPNLVTYNVLV 221
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLG 390
K + G A+ V +KM + P+ +T+ ++ G+C NV AR++ + G
Sbjct: 222 DALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVD--GFCKRGNVDDARKLLGIMVAKG 279
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
V T +A+++ C + EA + E GVTPD+ TY L KA+ E +
Sbjct: 280 MRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAE 339
Query: 451 KLLKRMEQNGIVPNKRFFLEALETFSSS 478
++L+RM +G P+ + + F S
Sbjct: 340 QMLRRMAGSGCTPDVVVYSSIIHAFCKS 367
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 142/337 (42%), Gaps = 9/337 (2%)
Query: 129 LEVFRWMQKQRWYIADTGI-YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
L FRW + T ++ L+ V+ + + R A LF + C PD YN +I
Sbjct: 60 LAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVI 119
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
+ + D L AL ++MK P+ T+ ++ A A A ++D L
Sbjct: 120 SGFCNAGD----LHAALELLEEMKSAGF-APDAFTHTPIITAMANAGDLD---GAMDHLR 171
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
P++ TY ++ A+ + ++E +L M+ C P+++T+N+L+D+ K
Sbjct: 172 SMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVG 231
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
+ V K ++ P + TFNS++ + K A + M A P+ +TY +I
Sbjct: 232 AAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALI 291
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
A+E+ +E+ G T +A++ C EA+ + G T
Sbjct: 292 DGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCT 351
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
PD Y + A+ K+ QK L+ M + P+
Sbjct: 352 PDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPD 388
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 138/313 (44%), Gaps = 6/313 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ L+ K+G A L M G RP+ Y+ALI K++ +A
Sbjct: 252 FNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLC----KSQKFLEAKEVL 307
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++MK P+ TY+ L+ +A +++ + + + S PD+ Y+ ++ A+ K
Sbjct: 308 EEMK-TRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCK 366
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK-PTLP 326
+G + E + L M+ + PD++T+N +ID K + + + + + S + P +
Sbjct: 367 SGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVV 426
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T++++I K+ + +A+ + +M P +TY II C + A + +
Sbjct: 427 TYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGM 486
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
+ G V T ++ C EA+ + E N G P+ TY + +
Sbjct: 487 KRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRI 546
Query: 447 ELVQKLLKRMEQN 459
+ Q+L++RM+
Sbjct: 547 KEAQQLVQRMKDG 559
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 8/167 (4%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L KSD ++ ++ M K D Y+ +I + K G+ A +L M+ +GC P
Sbjct: 435 LCKSDMLVEAQKLLDRMCKAGCN-PDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAP 493
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
+ Y LI+ KA+ + +A ++M+ C PN+VTYN ++ + + +
Sbjct: 494 NVVTYTTLISGLC----KARKVDEAERVMEEMRN-AGCPPNLVTYNTMVNGLCVSGRIKE 548
Query: 239 VNALFKELHE--SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
L + + + + +PD TY +++A + +++E E +L +MKS
Sbjct: 549 AQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKS 595
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 175/395 (44%), Gaps = 24/395 (6%)
Query: 86 LMRSFSDK--EPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIA 143
LM S S K +P V T N + L K+ K+L+ V M K
Sbjct: 154 LMDSMSGKGLKPCVFTYNAIIN------------GLCKTGKYLRAKGVLDEMLKIGMS-P 200
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT Y+ L+ + A +F EM + G PD ++ALI K L +A
Sbjct: 201 DTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI----GLLSKNGCLDQA 256
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L YF+ MK P+ V Y IL+ + + + + E+ E D+ TYN +++
Sbjct: 257 LKYFRDMKN-AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILN 315
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K M+ E + + + M PD TF LI+ Y K +K +F+ ++ KP
Sbjct: 316 GLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKP 375
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRARE 381
+ T+N++I + K K ++ M + + P+ I+Y +I GYC+ VS A
Sbjct: 376 DVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILIN--GYCNMGCVSEAFR 433
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
++DE+ + G + + T N +++ YC G +AD N G+ PD TY L +
Sbjct: 434 LWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFI 493
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
K + L+ +ME +G++P+ + L FS
Sbjct: 494 KEENMDRAFALVNKMENSGLLPDVITYNVILNGFS 528
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 175/391 (44%), Gaps = 45/391 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L E ++D + +F M Q + D +S LI ++ K G A+ F +M+N
Sbjct: 207 ILLVECCRNDNMMDAERIFDEMPSQ-GVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 265
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQ 232
+G PD +Y LI + +++AL +M +E+ C ++VTYN +L +
Sbjct: 266 AGLAPDNVIYTILIGGFC----RNGVMSEALKVRDEM--LEQGCVLDVVTYNTILNGLCK 319
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+ + + + LF E+ E + PD YT+ +++ Y K+G + + ++ M KPD++T
Sbjct: 320 EKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVT 379
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP----------------------------- 323
+N LID + K +K+ +++ ++ + P
Sbjct: 380 YNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMV 439
Query: 324 ------TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
T+ T N+++ Y +A KA+ M P ITY +I + +N+
Sbjct: 440 EKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMD 499
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
RA + +++ G V T N +L + G EA+L+ GV PD STY L
Sbjct: 500 RAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLI 559
Query: 438 KAY-TKANMKELVQKLLKRMEQNGIVPNKRF 467
+ T+ N+KE ++ M Q G VP+ +F
Sbjct: 560 NGHVTQNNLKEAF-RVHDEMLQRGFVPDDKF 589
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 159/362 (43%), Gaps = 23/362 (6%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E FR ++ + ++ S L+ + K G LA ++ E+ SG + + N +I A
Sbjct: 48 EAFRVLKSKGLCVSINACNS-LLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINA 106
Query: 190 HLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
K + + + M KG+ P++VTYN L+ A + +++ L +
Sbjct: 107 LC----KNQKIENTKSFLSDMEEKGV---FPDVVTYNTLINAYCRQGLLEEAFELMDSMS 159
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
L P ++TYN +++ K G + VL M PD T+N+L+ +
Sbjct: 160 GKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMM 219
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
E++F + P L +F+++I K +A F+ M P + Y +I
Sbjct: 220 DAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILI 279
Query: 368 TMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
G+C N +S A ++ DE+ + G + V T N +L C + +EAD LF G
Sbjct: 280 G--GFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERG 337
Query: 426 VTPDSSTYKLLYKAYTK-ANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQS 484
V PD T+ L Y+K NM + V L + M Q + P+ + T+++ + G
Sbjct: 338 VFPDFYTFTTLINGYSKDGNMNKAVT-LFEMMIQRNLKPD-------VVTYNTLIDGFCK 389
Query: 485 GS 486
GS
Sbjct: 390 GS 391
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 107/253 (42%)
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
C N + +++L+R QAR + + F+ L L I N ++ K G +
Sbjct: 23 CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 82
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
+ + + + ++ T N++I++ K Q + + + P + T+N++I Y
Sbjct: 83 EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 142
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
+ L +A + M+ P TY II RA+ + DE+ K+G
Sbjct: 143 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 202
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+T N +L C N +A+ +F+ + GV PD ++ L +K + K +
Sbjct: 203 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 262
Query: 456 MEQNGIVPNKRFF 468
M+ G+ P+ +
Sbjct: 263 MKNAGLAPDNVIY 275
>gi|168052517|ref|XP_001778696.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669911|gb|EDQ56489.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 799
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 168/394 (42%), Gaps = 33/394 (8%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L E+ ++ L VF WM+ Q+ Y A T IY+ +I + + + A LF EM+
Sbjct: 57 LISEITRTGALEHSLRVFNWMKNQKCYRARTDIYNCMIWLHARHQRADQARGLFYEMKVW 116
Query: 175 GCRPDPSVYNALITAH-----------------------LHTRDKAKALAKALG-YFQKM 210
C+PD YNAL+ H +R L A G Q
Sbjct: 117 RCKPDVETYNALMNVHGRAGQWRWALQIFDDMLQAPKPIAPSRSSYNNLINACGSSGQWF 176
Query: 211 KGMERCK--------PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
K +E CK P+++TYNI+L A A + L + D Y++N ++
Sbjct: 177 KALEICKRMTDNGVGPDLMTYNIILSAFKSGGQPRHAVAYYDHLISKKVPLDRYSHNIIL 236
Query: 263 DAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ K G ++ ++ M K N C+PD++TFN L+ Y K ++ F ++
Sbjct: 237 NCLTKLGRFEDAINLFKEMRKMNGCEPDVVTFNALLHVYALCGQITKAQETFDMMIGEGM 296
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
PT+ TFN+++ Y + +A V + K+ P ++Y ++ +G +A+E
Sbjct: 297 APTIVTFNTLLGAYASQGMYTEALQVVGLLVKAKFEPDVVSYSSLLNAFGKAGYPEKAQE 356
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+FD + + + + T N +++AY G A L + + P+ T L+ A
Sbjct: 357 VFDLMKQRSRKPNLVTFNGLMDAYASAGKYERARELLHDMAEARIEPNVVTICSLFAACA 416
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+A E V+ + + I N F A+ +
Sbjct: 417 RARCPEKVRDVFHEAKVRQIALNVPAFNAAITAY 450
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 169/393 (43%), Gaps = 73/393 (18%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRN-SGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
++ ++ + K G+ A+ LF EMR +GC PD +NAL LH + KA
Sbjct: 232 HNIILNCLTKLGRFEDAINLFKEMRKMNGCEPDVVTFNAL----LHVYALCGQITKAQET 287
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F M G E P IVT+N LL A A + + L ++ PD+ +Y+ +++A+G
Sbjct: 288 FDMMIG-EGMAPTIVTFNTLLGAYASQGMYTEALQVVGLLVKAKFEPDVVSYSSLLNAFG 346
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL- 325
K G ++ + V MK KP+++TFN L+D+Y +++ ++ + ++ +P +
Sbjct: 347 KAGYPEKAQEVFDLMKQRSRKPNLVTFNGLMDAYASAGKYERARELLHDMAEARIEPNVV 406
Query: 326 ----------------------------------PTFNSMIINYGKARLQGKAEYVFQKM 351
P FN+ I Y +A +A+ + + M
Sbjct: 407 TICSLFAACARARCPEKVRDVFHEAKVRQIALNVPAFNAAITAYIEAGQFDEAKALLEVM 466
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P+ +T+ +I G + AR ++D++ LG + V +A++ A+ +G+
Sbjct: 467 EEQNLRPNGVTFLLLINAAGSLGDYREARTLYDKMVDLGIPLTVEPCSALINAFAKHGMY 526
Query: 412 TEADLLFEN------------------SHNM--------------GVTPDSSTYKLLYKA 439
EA +F++ ++ M G+TPDS + L+ A
Sbjct: 527 NEARTIFDDMRKAGCKANVVTYTSLMIAYRMYDDAQLACEEMVAAGITPDSIAFGTLFVA 586
Query: 440 YTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
KAN E V ++ K GI+ + + E L
Sbjct: 587 LNKANRSEKVLQIEKSSRARGILFDDVAYTETL 619
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 167/369 (45%), Gaps = 9/369 (2%)
Query: 100 LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG 159
++K V + R H +L L K ++ + +F+ M+K D ++ L+ V G
Sbjct: 221 ISKKVPLDRYSHNIIL-NCLTKLGRFEDAINLFKEMRKMNGCEPDVVTFNALLHVYALCG 279
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
Q A F M G P +N L+ A+ +AL + +G K K +P+
Sbjct: 280 QITKAQETFDMMIGEGMAPTIVTFNTLLGAYASQGMYTEAL-QVVGLLVKAK----FEPD 334
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+V+Y+ LL A +A ++ +F + + P++ T+NG+MDAY G + +L
Sbjct: 335 VVSYSSLLNAFGKAGYPEKAQEVFDLMKQRSRKPNLVTFNGLMDAYASAGKYERARELLH 394
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
M + +P+++T L + + + +K+ VF + +P FN+ I Y +A
Sbjct: 395 DMAEARIEPNVVTICSLFAACARARCPEKVRDVFHEAKVRQIALNVPAFNAAITAYIEAG 454
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLN 399
+A+ + + M P+ +T+ +I G + AR ++D++ LG + V +
Sbjct: 455 QFDEAKALLEVMEEQNLRPNGVTFLLLINAAGSLGDYREARTLYDKMVDLGIPLTVEPCS 514
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
A++ A+ +G+ EA +F++ G + TY L AY M + Q + M
Sbjct: 515 ALINAFAKHGMYNEARTIFDDMRKAGCKANVVTYTSLMIAY---RMYDDAQLACEEMVAA 571
Query: 460 GIVPNKRFF 468
GI P+ F
Sbjct: 572 GITPDSIAF 580
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 162/336 (48%), Gaps = 11/336 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGC-RPDPSVYNALITAHLHTRDKAKALAKALGY 206
+ LI+ + + G ++ +F+ M+N C R +YN +I LH R + A+ G
Sbjct: 54 FPALISEITRTGALEHSLRVFNWMKNQKCYRARTDIYNCMI--WLHARHQRADQAR--GL 109
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI--LAPDIYTYNGVMDA 264
F +MK + RCKP++ TYN L+ +A +F ++ ++ +AP +YN +++A
Sbjct: 110 FYEMK-VWRCKPDVETYNALMNVHGRAGQWRWALQIFDDMLQAPKPIAPSRSSYNNLINA 168
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
G +G + + RM N PD++T+N+++ ++ K + + + SK+ P
Sbjct: 169 CGSSGQWFKALEICKRMTDNGVGPDLMTYNIILSAF-KSGGQPRHAVAYYDHLISKKVPL 227
Query: 325 LPTFNSMIIN-YGKARLQGKAEYVFQKMTAMK-YTPSFITYECIITMYGYCDNVSRAREI 382
+++I+N K A +F++M M P +T+ ++ +Y C +++A+E
Sbjct: 228 DRYSHNIILNCLTKLGRFEDAINLFKEMRKMNGCEPDVVTFNALLHVYALCGQITKAQET 287
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
FD + G + T N +L AY G+ TEA + PD +Y L A+ K
Sbjct: 288 FDMMIGEGMAPTIVTFNTLLGAYASQGMYTEALQVVGLLVKAKFEPDVVSYSSLLNAFGK 347
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
A E Q++ M+Q PN F ++ ++S+
Sbjct: 348 AGYPEKAQEVFDLMKQRSRKPNLVTFNGLMDAYASA 383
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 112/273 (41%), Gaps = 17/273 (6%)
Query: 149 SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQ 208
S LI K G A +F +MR +GC+ + Y +L+ A+ D A + +
Sbjct: 514 SALINAFAKHGMYNEARTIFDDMRKAGCKANVVTYTSLMIAYRMYDDAQLACEEMVA--- 570
Query: 209 KMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
G+ P+ + + L A +A ++V + K + D Y + A +
Sbjct: 571 --AGI---TPDSIAFGTLFVALNKANRSEKVLQIEKSSRARGILFDDVAYTETLLACSR- 624
Query: 269 GMIKEMESVL---SRMKSNQCK-PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-KP 323
+K+ E+ L MK + + + + NLL + G+ D++ +VF L P
Sbjct: 625 --LKDWETALFLYEGMKKRRLRLTNTMVINLL-SAVGRSGKLDRLHKVFLELQQQIGFVP 681
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
TL +N +I +Y + K V + P++ TYE I++ + EI+
Sbjct: 682 TLQMYNILIDSYSRGLKWRKCLEVLGCIKKDILEPNWKTYEPILSCLSQLELWETYLEIY 741
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
E+ G + + L + AY G+ EA L
Sbjct: 742 GEVLAQGMEPDYNILKISVTAYTSLGMEEEASL 774
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 166/377 (44%), Gaps = 38/377 (10%)
Query: 98 RTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGK 157
+ LN + E FLLFEE+ K+ +AD Y+ ++ K
Sbjct: 447 KVLNYLCNASKMELAFLLFEEM-----------------KRGGLVADVYTYTIMVDSFCK 489
Query: 158 KGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCK 217
G A F+EMR GC P+ Y ALI A+L KAK ++ A F+ M E C
Sbjct: 490 AGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL----KAKKVSYANELFETMLS-EGCL 544
Query: 218 PNIVTYNILL----------RAC------AQARNVDQVNALFKELHESILAPDIYTYNGV 261
PNIVTY+ L+ +AC +++V V+ FK+ ++ P++ TY +
Sbjct: 545 PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGAL 604
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+D + K+ ++E +L M C+P+ I ++ LID K D+ ++V +
Sbjct: 605 LDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 664
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
TL T++S+I Y K + Q A V KM P+ + Y +I A +
Sbjct: 665 PATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYK 724
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ + + G V T AM++ + M G L E + GV P+ TY++L
Sbjct: 725 LMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCC 784
Query: 442 KANMKELVQKLLKRMEQ 458
K ++ LL+ M+Q
Sbjct: 785 KNGALDVAHNLLEEMKQ 801
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 161/402 (40%), Gaps = 59/402 (14%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+C V M + Y I++ L+ G A L +M G P VYN L
Sbjct: 314 RCKRVLNMMMMEGCY-PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 372
Query: 187 ITAHLHTRDK-------------------------------------AKALAKALGYFQK 209
I + +D A KA ++
Sbjct: 373 IGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 432
Query: 210 MKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG 269
M G + P+ TY+ +L A ++ LF+E+ L D+YTY ++D++ K G
Sbjct: 433 MIG-QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAG 491
Query: 270 MIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFN 329
+I++ + M+ C P+++T+ LI +Y K + ++F++++ P + T++
Sbjct: 492 LIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYS 551
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYT----------------PSFITYECIITMYGYC 373
++I + KA KA +F++M K P+ +TY ++ G+C
Sbjct: 552 ALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLD--GFC 609
Query: 374 DN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ V AR++ D +S G + +A+++ C G EA + G
Sbjct: 610 KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLY 669
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
TY L Y K ++L K+L +M +N PN + E ++
Sbjct: 670 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMID 711
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/388 (17%), Positives = 158/388 (40%), Gaps = 43/388 (11%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
+ F W +Q Y +Y+ L+ ++ + ++ ++R+ D V+ +
Sbjct: 108 ISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDD----DKEVFGQFLN 163
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
+ + + + AL ++K R +P+ TYN L++A +A +D + + +E+
Sbjct: 164 VLVRKHCRNGSFSIALEELGRLKDF-RFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 222
Query: 249 SIL--------------------------------APDIYTYNGVMDAYGKNGMIKEMES 276
+ L PD Y ++ + + +E
Sbjct: 223 ANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMD 282
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
L+RM++ C P+++T++ L+ ++ + ++V +M P+ FNS++ Y
Sbjct: 283 FLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYC 342
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECII-TMYGYCDNVS-----RAREIFDELSKLG 390
+ A + +KM + P ++ Y +I ++ G D+++ A + + E+ G
Sbjct: 343 TSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAG 402
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
+ +++ C G +A + G PD+STY + A+ EL
Sbjct: 403 VVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAF 462
Query: 451 KLLKRMEQNGIVPNKRFFLEALETFSSS 478
L + M++ G+V + + +++F +
Sbjct: 463 LLFEEMKRGGLVADVYTYTIMVDSFCKA 490
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 152/359 (42%), Gaps = 29/359 (8%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L K KW + L + + ++ DT Y+KLI+ + + AM + MR + C P
Sbjct: 239 LCKVGKWREALT----LVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 294
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQK---MKGMERCKPNIVTYNILLRACAQARN 235
+ Y+ L+ L+ K LG ++ M ME C P+ +N L+ A + +
Sbjct: 295 NVVTYSTLLCGCLNK--------KQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGD 346
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKN------GMIKEMESVLSRMKSNQC--- 286
L K++ + P YN ++ + + ++ E S M +
Sbjct: 347 HSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLN 406
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY-GKARLQGKAE 345
K ++ +F + S GK ++K V + ++ P T+ S ++NY A A
Sbjct: 407 KINVSSFTRCLCSAGK---YEKAFSVIREMIGQGFIPDTSTY-SKVLNYLCNASKMELAF 462
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+F++M TY ++ + + +AR+ F+E+ ++G V T A++ AY
Sbjct: 463 LLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAY 522
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ A+ LFE + G P+ TY L + KA E ++ +RM + VP+
Sbjct: 523 LKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD 581
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 130/323 (40%), Gaps = 53/323 (16%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK---AKALAKA 203
+Y LI + K G+ A + +EM G Y++LI + + + +K L+K
Sbjct: 635 VYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 694
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L C PN+V Y ++ + D+ L + + E P++ TY ++D
Sbjct: 695 LE--------NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 746
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD-------KMEQ----- 311
+G G I+ +L RM S P+ +T+ +LID K A D +M+Q
Sbjct: 747 GFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 806
Query: 312 ---------------------VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
+ + P L + +I N KA+ A + ++
Sbjct: 807 HTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE 866
Query: 351 M-----TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+ T + Y+ TY +I + V A ++F E++K G ++ + ++++
Sbjct: 867 VATFSATLVDYSS---TYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGL 923
Query: 406 CMNGLPTEADLLFENSHNMGVTP 428
N +EA LL + +M V P
Sbjct: 924 FRNSKISEALLLLDFISHM-VCP 945
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 151/358 (42%), Gaps = 44/358 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS L+ K+ R AM L EMR GC PD YN LI A + D + +AL
Sbjct: 289 YSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGD----VDEALNIL 344
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP-------------- 253
+ CKP+ VTY +L++ + +V L E+ + AP
Sbjct: 345 SNLPS-HGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQ 403
Query: 254 ---------------------DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
DI TY+ ++D G + + +LSR+KS CKPD I
Sbjct: 404 QGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIA 463
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+ ++ + +++ E++ ++ S P TFN+++ + + L +A V ++M+
Sbjct: 464 YTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMS 523
Query: 353 AMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
+P +TY CII G C+ + A E+ +L G + T N +L+ C
Sbjct: 524 ENGCSPDIVTYNCIID--GLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDR 581
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+A+ L N PD T+ + + + + + LK M +NG VPN +
Sbjct: 582 WEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTY 639
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 160/350 (45%), Gaps = 14/350 (4%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
+EV M + +AD YS ++ + G+ A+ L S +++ GC+PD Y ++
Sbjct: 411 IEVVDHMS-EHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLK 469
Query: 189 AHLHTRDKAKA---LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
T +A +A+ L C P+ VT+N ++ + Q VD+ + ++
Sbjct: 470 GLCSTEQWERAEELMAEML--------CSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQ 521
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ E+ +PDI TYN ++D I + +LS ++S CKPDI+TFN L+
Sbjct: 522 MSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDR 581
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
++ EQ+ ++M S P TFN++I + + L +A + M P+ TY
Sbjct: 582 WEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSI 641
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
++ A E+ ++ D+ T N ++ G EA L + G
Sbjct: 642 VVDALLKAGKAQAALELLSGMTNGTPDLI--TYNTVISNLTKAGKMEEALDLLRVMVSNG 699
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ PD++TY+ L + + + ++L+R++ G+ P+ F+ + L F
Sbjct: 700 LCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGF 749
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 130/290 (44%), Gaps = 11/290 (3%)
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQARNV 236
PD +N LI A L R + + AL F M + R C P++VTY+ILL A +
Sbjct: 249 PDTFTFNPLIRA-LCVRGR---IPDALAVFDDM--LHRGCSPSVVTYSILLDATCKESGY 302
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
Q AL E+ PDI TYN +++A G + E ++LS + S+ CKPD +T+ +
Sbjct: 303 RQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPV 362
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
+ S + + ++E++ + + P TFN+++ + + L +A V M+
Sbjct: 363 LKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGC 422
Query: 357 TPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+TY I+ G CD V A E+ L G +L+ C A
Sbjct: 423 VADIVTYSSILD--GLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERA 480
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ L PD T+ + + + + + +++++M +NG P+
Sbjct: 481 EELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPD 530
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 148/340 (43%), Gaps = 30/340 (8%)
Query: 157 KKGQTRLAMWLFSEMRNSGCRPDPSVY--NALI---TAHLHTRDKAKALAKALG------ 205
++G+ A+ LF M + G R P V N LI + D + A ALG
Sbjct: 162 QRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFA-ALGPSATVV 220
Query: 206 -YFQKMKGMERC---------------KPNIVTYNILLRA-CAQARNVDQVNALFKELHE 248
Y + G R P+ T+N L+RA C + R D + A+F ++
Sbjct: 221 TYNTMVNGYCRAGRIEDARRLINGMPFPPDTFTFNPLIRALCVRGRIPDAL-AVFDDMLH 279
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
+P + TY+ ++DA K ++ ++L M++ C+PDI+T+N+LI++ D+
Sbjct: 280 RGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDE 339
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+ +L KP T+ ++ + + + E + +MT+ P +T+ I+T
Sbjct: 340 ALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVT 399
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
V RA E+ D +S+ G + T +++L+ C G +A L + G P
Sbjct: 400 SLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKP 459
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
D+ Y + K E ++L+ M + P++ F
Sbjct: 460 DTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTF 499
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 126/320 (39%), Gaps = 46/320 (14%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++ ++A + +KG A+ + +M +GC PD YN +I + + A
Sbjct: 495 DEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNE----SCIDDA 550
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ ++ CKP+IVT+N LL+ + L + S PD T+N V+
Sbjct: 551 MELLSDLQSCG-CKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVIT 609
Query: 264 AYGKNGMIKEMESVLSRMKSNQC---------------------------------KPDI 290
+ + G++ + L M N C PD+
Sbjct: 610 SLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDL 669
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG--KAEYVF 348
IT+N +I + K ++ + + ++ + P T+ S+ YG R G +A +
Sbjct: 670 ITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLA--YGVCREDGTDRAVRML 727
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+++ +P Y + + G+C + A + F + G ST +LEA
Sbjct: 728 RRVQDTGLSPDTTFYNDV--LLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALA 785
Query: 407 MNGLPTEADLLFENSHNMGV 426
GL EA L + ++GV
Sbjct: 786 YGGLLDEAKRLLASLCSLGV 805
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 86/214 (40%), Gaps = 8/214 (3%)
Query: 267 KNGMIKEMESVLSRMKSNQCK--PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ G I E + M S + P ++ N+LI E+VF +L S T
Sbjct: 162 QRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGPSA---T 218
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ T+N+M+ Y +A G+ E + + M + P T+ +I + A +FD
Sbjct: 219 VVTYNTMVNGYCRA---GRIEDARRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAVFD 275
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
++ G V T + +L+A C +A L + G PD TY +L A
Sbjct: 276 DMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEG 335
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ +L + +G P+ + L++ S
Sbjct: 336 DVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGS 369
>gi|452825793|gb|EME32788.1| mitochondrial protein translocase, MPT family [Galdieria
sulphuraria]
Length = 821
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 175/385 (45%), Gaps = 40/385 (10%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM-RNSGCR 177
LG+ +++ + WM+++ + YS LI +GK G A+ F M R
Sbjct: 322 LGRLERYSEAERSLIWMREEHIQ-PNIYTYSALIETLGKGGLCVRALSQFRRMSRIDNIA 380
Query: 178 PDPSVYNALI-TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
P+ YNA+I R+ + +A+ ++M + C P++VTY L+ A ++
Sbjct: 381 PNTVTYNAVIKIVSRCKRNDCGGITRAMSLLREM-ATKGCIPDVVTYATLIDAFSKRMEP 439
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
++ LF+E+ E+ + P+ Y Y+ ++ A+ + G ++ ++ M + PD+ FN L
Sbjct: 440 ERALKLFQEMKEANVKPNNYCYSSLISAFCRAGYVERALAIFEEMTHERIVPDVFAFNAL 499
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM-K 355
ID +GK + DK +++ + + +P TFN++I GKA+ +A MT +
Sbjct: 500 IDGFGKLRQVDKAFEIYDRMRKLQIQPDRITFNALISASGKAKNSIRALEAMGDMTEIYG 559
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML------------- 402
TP +Y +I G + ++A E+F+E+ G T NA++
Sbjct: 560 LTPDRHSYNALIDACGKSGDFTKAYEVFEEMRTKGIRPCTVTFNALIYGASRSHDLAASF 619
Query: 403 -------------EAYCMNGLPTEA----DL-----LFENSHNMGVTPDSSTYKLLYKAY 440
+AY MN L + DL + E +GV PD+ T+ A
Sbjct: 620 KIVDLMLQEGLNPDAYTMNTLISACNRRQDLSTAFEVLEKFKQLGVHPDNVTFNTFIDAV 679
Query: 441 TKANMKELVQKLLKRMEQNGIVPNK 465
K + E + +LL ME GI P+K
Sbjct: 680 GKLDSSEKMFELLSEMESRGISPSK 704
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 135/301 (44%), Gaps = 10/301 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS LI+ + G A+ +F EM + PD +NALI K + + KA +
Sbjct: 461 YSSLISAFCRAGYVERALAIFEEMTHERIVPDVFAFNALIDGF----GKLRQVDKAFEIY 516
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI-LAPDIYTYNGVMDAYG 266
+M+ ++ +P+ +T+N L+ A +A+N + ++ E L PD ++YN ++DA G
Sbjct: 517 DRMRKLQ-IQPDRITFNALISASGKAKNSIRALEAMGDMTEIYGLTPDRHSYNALIDACG 575
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME--QVFKSLMHSKEKPT 324
K+G + V M++ +P +TFN LI YG ++ D ++ ++ P
Sbjct: 576 KSGDFTKAYEVFEEMRTKGIRPCTVTFNALI--YGASRSHDLAASFKIVDLMLQEGLNPD 633
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
T N++I + + A V +K + P +T+ I G D+ + E+
Sbjct: 634 AYTMNTLISACNRRQDLSTAFEVLEKFKQLGVHPDNVTFNTFIDAVGKLDSSEKMFELLS 693
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E+ G TLN ++ G + F H + PDS T+ LL + Y +
Sbjct: 694 EMESRGISPSKVTLNTIVGCCGRRGKIDLMERGFHMFHEKRLEPDSVTFSLLIENYVSHH 753
Query: 445 M 445
+
Sbjct: 754 L 754
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 101/230 (43%), Gaps = 5/230 (2%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
GK+ ++ LE M + D Y+ LI GK G A +F EMR G RP
Sbjct: 539 GKAKNSIRALEAMGDMTEIYGLTPDRHSYNALIDACGKSGDFTKAYEVFEEMRTKGIRPC 598
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQV 239
+NALI + D A + Q E P+ T N L+ AC + +++
Sbjct: 599 TVTFNALIYGASRSHDLAASFKIVDLMLQ-----EGLNPDAYTMNTLISACNRRQDLSTA 653
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
+ ++ + + PD T+N +DA GK ++M +LS M+S P +T N ++
Sbjct: 654 FEVLEKFKQLGVHPDNVTFNTFIDAVGKLDSSEKMFELLSEMESRGISPSKVTLNTIVGC 713
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
G+R D ME+ F + +P TF+ +I NY L KA +
Sbjct: 714 CGRRGKIDLMERGFHMFHEKRLEPDSVTFSLLIENYVSHHLLDKAVIAYH 763
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 107/252 (42%), Gaps = 41/252 (16%)
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
+N MDA K G +E + M SN+ K D+ ++++ I + G+ + + + E+ +
Sbjct: 280 WNYTMDALLKGGKARECLDMFLSMPSNEVKRDVASWSIYITALGRLERYSEAERSLIWMR 339
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM-KYTPSFITYECIITMYGYC--- 373
+P + T++++I GK L +A F++M+ + P+ +TY +I + C
Sbjct: 340 EEHIQPNIYTYSALIETLGKGGLCVRALSQFRRMSRIDNIAPNTVTYNAVIKIVSRCKRN 399
Query: 374 --DNVSRAREIFDELS----------------------------KLGKDMKVSTL----- 398
++RA + E++ KL ++MK + +
Sbjct: 400 DCGGITRAMSLLREMATKGCIPDVVTYATLIDAFSKRMEPERALKLFQEMKEANVKPNNY 459
Query: 399 --NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
++++ A+C G A +FE + + PD + L + K + ++ RM
Sbjct: 460 CYSSLISAFCRAGYVERALAIFEEMTHERIVPDVFAFNALIDGFGKLRQVDKAFEIYDRM 519
Query: 457 EQNGIVPNKRFF 468
+ I P++ F
Sbjct: 520 RKLQIQPDRITF 531
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 148/317 (46%), Gaps = 5/317 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ LI + K G+ A+ LF +M GC+PD Y +I K A A G
Sbjct: 164 FTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLC----KMGETAAAAGLI 219
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+KM G C+P++VTY+ L+ + + R V++ +F + ++P + +Y ++
Sbjct: 220 KKM-GEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCS 278
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
KE ++L+ M S PDI+TF+LLID + K + + V K++ +P + T
Sbjct: 279 FSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVIT 338
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+NS++ Y +A +F M P +Y +I Y + A+++F+E+
Sbjct: 339 YNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMI 398
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G + ++ A+C G EA LF++ H G PD TY +L + + K
Sbjct: 399 HQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLG 458
Query: 448 LVQKLLKRMEQNGIVPN 464
+L + M+ + PN
Sbjct: 459 KAFRLFRAMQGTYLKPN 475
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 166/354 (46%), Gaps = 6/354 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L K+ ++ Q LE+F M R D Y+ +I + K G+T A L +M
Sbjct: 167 LINGLCKAGEFAQALELFDDMVA-RGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEV 225
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC+PD Y+ LI + K + + +AL F MK + P +V+Y L++
Sbjct: 226 GCQPDVVTYSTLIDSLC----KDRLVNEALDIFSYMKA-KGISPTVVSYTSLIQGLCSFS 280
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ +A+ E+ + PDI T++ ++D + K G + E + VL M +P++IT+N
Sbjct: 281 RWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYN 340
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
L+ Y + + ++F ++ KP + +++ +I Y + +A+ +F +M
Sbjct: 341 SLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQ 400
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
TP+ ++Y +I + + ARE+F ++ G + T + +LE +C G +A
Sbjct: 401 GLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKA 460
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
LF + P+ Y +L + K+ +KL + +G+ P+ + +
Sbjct: 461 FRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIY 514
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 146/332 (43%), Gaps = 12/332 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFS-EMRNSGCRPDPSVYNALITAHL---HTRDKAKALAKA 203
++KL++ + + Q A+ S +M +G P+ N LI H LAK
Sbjct: 93 FNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKV 152
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ G++ P I+T+ L+ +A Q LF ++ PD+YTY +++
Sbjct: 153 IKL-----GLQ---PTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIIN 204
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K G ++ +M C+PD++T++ LIDS K + ++ +F + P
Sbjct: 205 GLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISP 264
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T+ ++ S+I +A + +MT++ P +T+ +I ++ NV A+ +
Sbjct: 265 TVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVL 324
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
++++G + V T N+++ Y + EA LF+ G PD +Y +L Y
Sbjct: 325 KTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMV 384
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ ++L M G+ PN + + F
Sbjct: 385 KRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAF 416
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 155/352 (44%), Gaps = 8/352 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI-YSKLIAVMGKKGQTRLAMWLFSEMRN 173
L + L K + L++F +M+ + I+ T + Y+ LI + + + A + +EM +
Sbjct: 237 LIDSLCKDRLVNEALDIFSYMKAKG--ISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTS 294
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
PD ++ LI K + +A G + M M +PN++TYN L+ +
Sbjct: 295 LNIMPDIVTFSLLIDIFC----KEGNVLEAQGVLKTMTEMG-VEPNVITYNSLMHGYSLQ 349
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
V + LF + PD+++Y+ +++ Y I E + + + M P+ +++
Sbjct: 350 MEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSY 409
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
LI ++ + + ++FK + + P L T++ ++ + K GKA +F+ M
Sbjct: 410 TTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQG 469
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P+ + Y +I N++ AR++F EL G V ++ C GL E
Sbjct: 470 TYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDE 529
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
A F G P+ +Y ++ + + + + +L+ M G V ++
Sbjct: 530 ALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADE 581
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 106/250 (42%), Gaps = 5/250 (2%)
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS---RMKSNQ 285
A + RN+D A F + P I +N ++ A + M + ++V+S +M+
Sbjct: 64 ASSSFRNIDDALASFNHMLHRKPLPCIIQFNKLLSAIVR--MRQYYDAVISLSKQMELAG 121
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
P+ T N+LI+ + Q D V ++ +PT+ TF ++I KA +A
Sbjct: 122 LSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQAL 181
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+F M A P TY II + A + ++ ++G V T + ++++
Sbjct: 182 ELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSL 241
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
C + L EA +F G++P +Y L + + + +L M I+P+
Sbjct: 242 CKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDI 301
Query: 466 RFFLEALETF 475
F ++ F
Sbjct: 302 VTFSLLIDIF 311
>gi|115444491|ref|NP_001046025.1| Os02g0170000 [Oryza sativa Japonica Group]
gi|49388067|dbj|BAD25179.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535556|dbj|BAF07939.1| Os02g0170000 [Oryza sativa Japonica Group]
Length = 397
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 142/297 (47%), Gaps = 6/297 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ G A + SEMR G P+ +VYNA + L KA+ KA+ +
Sbjct: 15 YALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLL----KARCTEKAVEVY 70
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
Q+MK ERC+ N T+ +++ +A+ +F E+ P+I TY +++A+ +
Sbjct: 71 QRMK-RERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAR 129
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G+ ++ E V M+ +PD+ +N L+++Y + ++F + H +P +
Sbjct: 130 EGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRAS 189
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N ++ YG+A L AE VF+++ +P+ ++ ++ + N +R E+ +L
Sbjct: 190 YNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLH 249
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
K G LNAML AY G + + LF G D TY + AY +A
Sbjct: 250 KSGLTPDTFALNAMLNAYARAGRLDDMERLFAAMERRG-DADVGTYNVAVNAYGRAG 305
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 129/259 (49%), Gaps = 3/259 (1%)
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
+C P TY +LLRA A ++ + + E+ E + P+ YN +D K ++
Sbjct: 7 QCVPTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKA 66
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGK-RQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
V RMK +C+ + TF L+I+ YGK +Q M +VF + KP + T+ +++
Sbjct: 67 VEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSM-KVFNEMKSIGCKPNICTYTALVN 125
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
+ + L KAE VF++M + P Y ++ Y A EIF + +G +
Sbjct: 126 AFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEP 185
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
++ N +++AY GL +A+ +FE G++P ++ LL A+ ++ ++++
Sbjct: 186 DRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVM 245
Query: 454 KRMEQNGIVPNKRFFLEAL 472
++ ++G+ P+ F L A+
Sbjct: 246 AQLHKSGLTPDT-FALNAM 263
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 112/221 (50%), Gaps = 6/221 (2%)
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
L E+ P TY ++ AY G + E V+S M+ + P+ +N +D K +
Sbjct: 3 LLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARC 62
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+K +V++ + + + TF MI YGKA+ + VF +M ++ P+ TY
Sbjct: 63 TEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTA 122
Query: 366 IITMY---GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
++ + G C+ +A E+F+E+ + G + V NA++EAY GLP A +F
Sbjct: 123 LVNAFAREGLCE---KAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQ 179
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
+MG PD ++Y +L AY +A + E + + + ++Q G+ P
Sbjct: 180 HMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSP 220
>gi|242060656|ref|XP_002451617.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
gi|241931448|gb|EES04593.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
Length = 593
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 131/262 (50%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+P+I+ YN+L+ A Q R +++ +++ L E+ P TY ++ AY +G + E
Sbjct: 162 RPDIICYNLLIDAYGQKRQLNKAESIYMALLEAHCVPTEDTYALLLRAYCNSGQLHRAEG 221
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
V+S M+ N P +N +D K + +K +V++ + + + T+ MI YG
Sbjct: 222 VISEMQKNGLPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLMINVYG 281
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
KA+ + VF +M + P+ TY ++ + +A E+F+E+ + G + V
Sbjct: 282 KAKQPMSSLKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVY 341
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
NA++EAY GLP A +F +MG PD ++Y +L AY +A + + + + +
Sbjct: 342 AYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAYGRAGLHQEAEAAFQEL 401
Query: 457 EQNGIVPNKRFFLEALETFSSS 478
+Q G+ P + + L + S
Sbjct: 402 KQQGMRPTMKSHMLLLSAHAKS 423
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 152/386 (39%), Gaps = 74/386 (19%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR------------- 194
Y+ L+ GQ A + SEM+ +G P +VYNA + L R
Sbjct: 203 YALLLRAYCNSGQLHRAEGVISEMQKNGLPPTATVYNAYLDGLLKARCSEKAVEVYQRMK 262
Query: 195 ------------------DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
KAK +L F +MK + CKPNI TY L+ A A+
Sbjct: 263 KERCRTNTETYTLMINVYGKAKQPMSSLKVFNEMKTIG-CKPNICTYTALVNAFAREGLC 321
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
++ +F+E+ ++ PD+Y YN +M+AY + G+ + + S M+ C+PD ++N+L
Sbjct: 322 EKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNIL 381
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT----------------------------- 327
+D+YG+ + E F+ L +PT+ +
Sbjct: 382 VDAYGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQLHKSGL 441
Query: 328 ------FNSMIINYGKA-------RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
N+M+ YG+A RL G E P TY ++ +YG
Sbjct: 442 RPDTFALNAMLNAYGRAGRLDDMERLLGAMERGGDDDAGGGAAPDTSTYNVLVNVYGRAG 501
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
+ R F L+ G V T + + AY +FE + G PD+ T K
Sbjct: 502 YLDRMEAAFRALAARGLAADVVTWTSRIGAYARKKEYGRCLEIFEEMVDAGCYPDAGTAK 561
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNG 460
+L A + E V +++ M ++
Sbjct: 562 VLLAACSDERQVEQVTAIVRSMHKDA 587
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 138/296 (46%), Gaps = 6/296 (2%)
Query: 177 RPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
RPD YN LI A+ R KA + + + C P TY +LLRA + +
Sbjct: 162 RPDIICYNLLIDAYGQKRQLNKAESIYMALLEA-----HCVPTEDTYALLLRAYCNSGQL 216
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
+ + E+ ++ L P YN +D K ++ V RMK +C+ + T+ L+
Sbjct: 217 HRAEGVISEMQKNGLPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLM 276
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
I+ YGK + +VF + KP + T+ +++ + + L KAE VF++M +
Sbjct: 277 INVYGKAKQPMSSLKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGH 336
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
P Y ++ Y A EIF + +G + ++ N +++AY GL EA+
Sbjct: 337 EPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAYGRAGLHQEAEA 396
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
F+ G+ P ++ LL A+ K+ ++++ ++ ++G+ P+ F L A+
Sbjct: 397 AFQELKQQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQLHKSGLRPDT-FALNAM 451
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 150/337 (44%), Gaps = 9/337 (2%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W + V W+ + + D Y+ LI G+K Q A ++ + + C P Y
Sbjct: 144 QWEPIITVCEWILYRSSFRPDIICYNLLIDAYGQKRQLNKAESIYMALLEAHCVPTEDTY 203
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNA 241
L+ A+ ++ L +A G +M+ G+ P YN L +AR ++
Sbjct: 204 ALLLRAYCNS----GQLHRAEGVISEMQKNGL---PPTATVYNAYLDGLLKARCSEKAVE 256
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
+++ + + + TY +++ YGK V + MK+ CKP+I T+ L++++
Sbjct: 257 VYQRMKKERCRTNTETYTLMINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYTALVNAFA 316
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
+ +K E+VF+ + + +P + +N+++ Y +A L A +F M M P
Sbjct: 317 REGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRA 376
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
+Y ++ YG A F EL + G + + +L A+ +G + +
Sbjct: 377 SYNILVDAYGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQL 436
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
H G+ PD+ + AY +A + +++LL ME+
Sbjct: 437 HKSGLRPDTFALNAMLNAYGRAGRLDDMERLLGAMER 473
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 136/298 (45%), Gaps = 13/298 (4%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
L+ GK+ + + L+VF M K + Y+ L+ ++G A +F EM+
Sbjct: 275 LMINVYGKAKQPMSSLKVFNEM-KTIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQ 333
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
+G PD YNAL+ A+ +A A F M+ M C+P+ +YNIL+ A +A
Sbjct: 334 AGHEPDVYAYNALMEAY----SRAGLPQGASEIFSLMEHMG-CEPDRASYNILVDAYGRA 388
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ A F+EL + + P + ++ ++ A+ K+G + E V++++ + +PD
Sbjct: 389 GLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQLHKSGLRPDTFAL 448
Query: 294 NLLIDSYGKRQAFDKMEQVFKSL-------MHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
N ++++YG+ D ME++ ++ P T+N ++ YG+A + E
Sbjct: 449 NAMLNAYGRAGRLDDMERLLGAMERGGDDDAGGGAAPDTSTYNVLVNVYGRAGYLDRMEA 508
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
F+ + A +T+ I Y R EIF+E+ G T +L A
Sbjct: 509 AFRALAARGLAADVVTWTSRIGAYARKKEYGRCLEIFEEMVDAGCYPDAGTAKVLLAA 566
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 73/174 (41%), Gaps = 3/174 (1%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALGYFQ 208
L++ K G + +++ SG RPD NA++ A+ D + L A+
Sbjct: 416 LLSAHAKSGNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLLGAMERGG 475
Query: 209 KMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
P+ TYN+L+ +A +D++ A F+ L LA D+ T+ + AY +
Sbjct: 476 DDDAGGGAAPDTSTYNVLVNVYGRAGYLDRMEAAFRALAARGLAADVVTWTSRIGAYARK 535
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+ M C PD T +L+ + + +++ + +S MH K
Sbjct: 536 KEYGRCLEIFEEMVDAGCYPDAGTAKVLLAACSDERQVEQVTAIVRS-MHKDAK 588
>gi|125580966|gb|EAZ21897.1| hypothetical protein OsJ_05550 [Oryza sativa Japonica Group]
Length = 595
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 128/247 (51%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+P+I+ YN+L+ + + R +++ +++ L E+ P TY ++ AY G + E
Sbjct: 172 RPDIICYNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEG 231
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
V+S M+ + P+ +N +D K + +K +V++ + + + TF MI YG
Sbjct: 232 VISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYG 291
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
KA+ + VF +M ++ P+ TY ++ + +A E+F+E+ + G + V
Sbjct: 292 KAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVY 351
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
NA++EAY GLP A +F +MG PD ++Y +L AY +A + E + + + +
Sbjct: 352 AYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEEL 411
Query: 457 EQNGIVP 463
+Q G+ P
Sbjct: 412 KQRGMSP 418
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 153/337 (45%), Gaps = 5/337 (1%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
KW + V W+ + + D Y+ LI GKK Q A ++ + + C P Y
Sbjct: 154 KWDLIIPVCEWILYRSSFRPDIICYNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTY 213
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
L+ A+ + A +L +A G +M+ PN YN L +AR ++ ++
Sbjct: 214 ALLLRAYCN----AGSLHRAEGVISEMR-EHGIPPNATVYNAYLDGLLKARCTEKAVEVY 268
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR 303
+ + + T+ +++ YGK V + MKS CKP+I T+ L++++ +
Sbjct: 269 QRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFARE 328
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
+K E+VF+ + + +P + +N+++ Y +A L A +F M M P +Y
Sbjct: 329 GLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASY 388
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
++ YG A +F+EL + G + + +L A+ +G T + + H
Sbjct: 389 NILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHK 448
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
G+TPD+ + AY +A + +++L ME+ G
Sbjct: 449 SGLTPDTFALNAMLNAYARAGRLDDMERLFAAMERRG 485
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 147/299 (49%), Gaps = 12/299 (4%)
Query: 177 RPDPSVYNALITAHLHTR--DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
RPD YN LI ++ R +KA+++ AL Q C P TY +LLRA A
Sbjct: 172 RPDIICYNLLIESYGKKRQLNKAESIYMALLEAQ-------CVPTEDTYALLLRAYCNAG 224
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
++ + + E+ E + P+ YN +D K ++ V RMK +C+ + TF
Sbjct: 225 SLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFT 284
Query: 295 LLIDSYGK-RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
L+I+ YGK +Q M +VF + KP + T+ +++ + + L KAE VF++M
Sbjct: 285 LMINVYGKAKQPMSSM-KVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQ 343
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
+ P Y ++ Y A EIF + +G + ++ N +++AY GL +
Sbjct: 344 AGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHED 403
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
A+ +FE G++P ++ LL A+ ++ ++++ ++ ++G+ P+ F L A+
Sbjct: 404 AEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDT-FALNAM 461
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 159/386 (41%), Gaps = 37/386 (9%)
Query: 112 CF-LLFEELGKSDKWLQCLEVF-RWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFS 169
C+ LL E GK + + ++ ++ Q DT Y+ L+ G A + S
Sbjct: 177 CYNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDT--YALLLRAYCNAGSLHRAEGVIS 234
Query: 170 EMRNSGCRPDPSVYNALITAHLHTR-------------------------------DKAK 198
EMR G P+ +VYNA + L R KAK
Sbjct: 235 EMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYGKAK 294
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
++ F +MK + CKPNI TY L+ A A+ ++ +F+E+ ++ PD+Y Y
Sbjct: 295 QPMSSMKVFNEMKSIG-CKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAY 353
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N +M+AY + G+ + + S M+ C+PD ++N+L+D+YG+ + E VF+ L
Sbjct: 354 NALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQ 413
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
PT+ + ++ + ++ + E V ++ TP ++ Y +
Sbjct: 414 RGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDD 473
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
+F + + G D V T N + AY G + F G+ D T+
Sbjct: 474 MERLFAAMERRG-DADVGTYNVAVNAYGRAGYVGRMEAAFAAVAARGLAADVVTWTARMG 532
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPN 464
AY + +++ M G P+
Sbjct: 533 AYARRKEYGRCVGMVEEMVDAGCYPD 558
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 134/291 (46%), Gaps = 7/291 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
L+ GK+ + + ++VF M K + Y+ L+ ++G A +F EM+
Sbjct: 285 LMINVYGKAKQPMSSMKVFNEM-KSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQ 343
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
+G PD YNAL+ A+ +A A F M+ M C+P+ +YNIL+ A +A
Sbjct: 344 AGHEPDVYAYNALMEAY----SRAGLPQGASEIFSLMQHMG-CEPDRASYNILVDAYGRA 398
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ A+F+EL + ++P + ++ ++ A+ ++G E V++++ + PD
Sbjct: 399 GLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFAL 458
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N ++++Y + D ME++F + M + + T+N + YG+A G+ E F + A
Sbjct: 459 NAMLNAYARAGRLDDMERLFAA-MERRGDADVGTYNVAVNAYGRAGYVGRMEAAFAAVAA 517
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
+T+ + Y R + +E+ G T +L A
Sbjct: 518 RGLAADVVTWTARMGAYARRKEYGRCVGMVEEMVDAGCYPDAGTARVLLAA 568
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 7/172 (4%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
L+A + G + +++ SG PD NA++ A+ +A L F M
Sbjct: 426 LLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYA----RAGRLDDMERLFAAM 481
Query: 211 KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
+ R ++ TYN+ + A +A V ++ A F + LA D+ T+ M AY +
Sbjct: 482 E--RRGDADVGTYNVAVNAYGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAYARRKE 539
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
++ M C PD T +L+ + + +++ + +S MH K K
Sbjct: 540 YGRCVGMVEEMVDAGCYPDAGTARVLLAACSDERQVEQVTAIVRS-MHKKPK 590
>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
Length = 410
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 144/310 (46%), Gaps = 9/310 (2%)
Query: 157 KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK--GME 214
K G A +F EM G P+ Y AL+ + + K A F++M+ G+E
Sbjct: 50 KGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFA----LFEEMRRGGVE 105
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
PN+ TYN L+ + ++ +LF E+ + ++ +YN ++ ++G + +
Sbjct: 106 ---PNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDA 162
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
+L M++ +P IITFNLL+D YGK F + + +P+ T+N +I
Sbjct: 163 AKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAG 222
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
+ +AR +A M P+ +TY +I + +++ +A EI + K G ++
Sbjct: 223 FCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVD 282
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
T ++ A CM G +A LF++ GV P + Y ++ Y + KL+
Sbjct: 283 AHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIM 342
Query: 455 RMEQNGIVPN 464
M Q G++PN
Sbjct: 343 EMRQKGLIPN 352
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 118/257 (45%), Gaps = 5/257 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LIA + + G+ A L MR G RP +N L+ + KA ++ AL +F
Sbjct: 146 YNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGY----GKAGKMSNALPFF 201
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+MK +P+ VTYN+L+ +AR++ + N ++ E L P TY ++D++ +
Sbjct: 202 NQMKA-AGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFAR 260
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ + +L+ M+ + D T+ +L+ + ++F+S+ +P+
Sbjct: 261 ENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVI 320
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
++ MI YG+ KA + +M P+ +Y I + D A + D++
Sbjct: 321 YDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMV 380
Query: 388 KLGKDMKVSTLNAMLEA 404
+ G S A+L+A
Sbjct: 381 RAGLQTSESICQALLDA 397
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 126/329 (38%), Gaps = 44/329 (13%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ GQ LF EMR G P+ YN LI T + +A F
Sbjct: 76 YTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGE----FERARSLF 131
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M +G+ R N+V+YN L+ + + L + P I T+N ++D Y
Sbjct: 132 DEMPVRGIVR---NVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGY 188
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
GK G + ++MK+ +P +T+N+LI + + + + + + +PT
Sbjct: 189 GKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTK 248
Query: 326 PTFNSMIINYGKARLQGKA-----------------------------------EYVFQK 350
T+ +I ++ + GKA +FQ
Sbjct: 249 VTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQS 308
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M PS + Y+ +I YG + +A ++ E+ + G ++ + C +
Sbjct: 309 MGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDK 368
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKA 439
EA+ L ++ G+ S + L A
Sbjct: 369 CQEAEALLDDMVRAGLQTSESICQALLDA 397
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 99/251 (39%), Gaps = 4/251 (1%)
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
R CA + L + A D+ +++ K G + E V M
Sbjct: 11 RLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLA 70
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P+ +T+ L+ Y +K +F+ + +P L T+N +I + + +A +
Sbjct: 71 PNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSL 130
Query: 348 FQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
F +M + ++Y +I G C + A ++ D + G + T N +++ Y
Sbjct: 131 FDEMPVRGIVRNVVSYNTLIA--GLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGY 188
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
G + A F G P + TY +L + +A + L M++ G+ P K
Sbjct: 189 GKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTK 248
Query: 466 RFFLEALETFS 476
+ +++F+
Sbjct: 249 VTYTILIDSFA 259
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 91/232 (39%), Gaps = 8/232 (3%)
Query: 269 GMIKEMESVLSR-MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G ++ ++L+R KS D+ L++ K + +VF + P T
Sbjct: 16 GDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVT 75
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ +++ Y + K +F++M P+ TY C+I + RAR +FDE+
Sbjct: 76 YTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMP 135
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G V + N ++ C +G +A L + G P T+ LL Y KA
Sbjct: 136 VRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMS 195
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTRSLSTAK 499
+M+ G P+ T++ +AG T R+LS K
Sbjct: 196 NALPFFNQMKAAGFQPSA-------VTYNMLIAGFCRARDMTRANRALSDMK 240
>gi|15223266|ref|NP_172337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262899|sp|Q9FRS4.1|PPR22_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08610
gi|9802579|gb|AAF99781.1|AC003981_31 F22O13.9 [Arabidopsis thaliana]
gi|332190196|gb|AEE28317.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 199/449 (44%), Gaps = 32/449 (7%)
Query: 25 SSSSSSSFNQSSSQNYNFTHRHIPLSLRTRPRTGICCVWTRPRSKRGRKSE-------EL 77
SS + N + ++ F H + +LR R +P + G S+ E
Sbjct: 55 SSVCIDNVNDHAERSSEFHHYGVGTNLRAR---------VKPMKQFGLSSDGPITENDEE 105
Query: 78 ESKELVRVLMRS--FSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWM 135
+ E++ L + +D LV + ++ +V C L L + D+ + + + R M
Sbjct: 106 TNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVM 165
Query: 136 QKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRD 195
+ DT Y+ +I + KKG R A+ L +M SG PD YN +I +
Sbjct: 166 VMSGG-VPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGN 224
Query: 196 KAKALAKALGYFQKMKGMERCKPNIVTYNILL----RACAQARNVDQVNALFKELHESIL 251
+A+ F K + C P ++TY +L+ R C AR ++ + +++
Sbjct: 225 AEQAIR-----FWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIE----VLEDMAVEGC 275
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
PDI TYN +++ + G ++E+ SV+ + S+ + + +T+N L+ S + +D++E+
Sbjct: 276 YPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEE 335
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+ + + PT+ T+N +I KARL +A F +M K P +TY ++
Sbjct: 336 ILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMS 395
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
V A E+ L + T N++++ GL +A L+ + G+ PD
Sbjct: 396 KEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDI 455
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNG 460
T + L + +AN+ E ++LK G
Sbjct: 456 TRRSLIYGFCRANLVEEAGQVLKETSNRG 484
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/247 (18%), Positives = 97/247 (39%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+ + + L+R A+ +D+ + + + S PD TYN ++ K G I+ +
Sbjct: 137 PHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVL 196
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L M + PD+IT+N +I ++ + +K + + P + T+ ++ +
Sbjct: 197 LEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCR 256
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
+A V + M P +TY ++ N+ + + G ++ T
Sbjct: 257 YCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVT 316
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
N +L + C + E + + + P TY +L KA + +M
Sbjct: 317 YNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQML 376
Query: 458 QNGIVPN 464
+ +P+
Sbjct: 377 EQKCLPD 383
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 10/186 (5%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L L K+ + ++ F M +Q+ + D Y+ ++ M K+G A+ L ++N
Sbjct: 354 ILINGLCKARLLSRAIDFFYQMLEQKC-LPDIVTYNTVLGAMSKEGMVDDAIELLGLLKN 412
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACA 231
+ C P YN++I K + KAL + +M G+ P+ +T L+
Sbjct: 413 TCCPPGLITYNSVIDG----LAKKGLMKKALELYHQMLDAGI---FPDDITRRSLIYGFC 465
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+A V++ + KE TY V+ K I+ V+ M + CKPD
Sbjct: 466 RANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDET 525
Query: 292 TFNLLI 297
+ ++
Sbjct: 526 IYTAIV 531
Score = 38.5 bits (88), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 86/225 (38%), Gaps = 2/225 (0%)
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
D T N ++ NG + + ++ M + P + + L+ + DK +
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII-TMYGY 372
+ ++ S P T+N +I N K A + + M+ P ITY +I M+ Y
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 373 CDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
N +A + + + G + T ++E C A + E+ G PD T
Sbjct: 223 -GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVT 281
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
Y L + E V +++ + +G+ N + L + S
Sbjct: 282 YNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCS 326
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 151/327 (46%), Gaps = 7/327 (2%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
++ I Y+ LI KKG + A+ + S M ++ C P+ YN LI +
Sbjct: 372 EKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFC----RG 427
Query: 198 KALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
K + KA+ KM +ER +PN+VTYNIL+ + ++ L ++ES L PD +
Sbjct: 428 KNIHKAMSLLHKM--LERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEW 485
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TY+ +D K G+++E S+ +K K + + ++ LID Y K + +
Sbjct: 486 TYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKM 545
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+ + P T+NS+I Y K + +A + M P+ TY +I D
Sbjct: 546 LSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEF 605
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A ++FD++ G V A + AYC +G +A++L + G+ PD+ Y L
Sbjct: 606 DQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLF 665
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVP 463
AY + + +LKRM + G P
Sbjct: 666 IDAYGRFGSIDGAFGILKRMHEVGCEP 692
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 137/312 (43%), Gaps = 9/312 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + + A+ LFS+M C P Y +I A K +AL F
Sbjct: 277 YTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEAL----NMF 332
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M + C+PN+ TY +L+ + + N D + + E L P + TYN ++D Y K
Sbjct: 333 KEMTE-KHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCK 391
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G+ +LS M+SN C P+ T+N LI + + + K + ++ K +P + T
Sbjct: 392 KGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVT 451
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N +I K G A + M P TY I V AR +F+ L
Sbjct: 452 YNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLK 511
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA-NMK 446
+ G + +++ YC G ++ L + + G P+S TY L Y K N K
Sbjct: 512 EKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFK 571
Query: 447 E---LVQKLLKR 455
E LV ++KR
Sbjct: 572 EARLLVDIMIKR 583
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 138/314 (43%), Gaps = 9/314 (2%)
Query: 157 KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERC 216
K G A S++ +G D Y +LI + R+K A A+ KG C
Sbjct: 216 KLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGY--CRNKNVDAANAIFLSMPNKG---C 270
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
N V+Y L+ +AR VD+ LF ++HE P + TY ++ A + G E +
Sbjct: 271 LRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALN 330
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+ M C+P++ T+ +LI S + FD +++ ++ P++ T+N++I Y
Sbjct: 331 MFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYC 390
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMK 394
K L A + M + +P+ TY +I G+C N+ +A + ++ +
Sbjct: 391 KKGLSASALEILSLMESNNCSPNARTYNELIL--GFCRGKNIHKAMSLLHKMLERKLQPN 448
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
V T N ++ C G A L + G+ PD TY + K + E + L +
Sbjct: 449 VVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFE 508
Query: 455 RMEQNGIVPNKRFF 468
+++ GI N+ +
Sbjct: 509 SLKEKGIKANEVIY 522
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 142/333 (42%), Gaps = 42/333 (12%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K++ A+ IYS LI K G+ +L +M ++GC P+ YN+LI + ++K
Sbjct: 511 KEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDG--YCKEK 568
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
A+ L + +E P TY IL+ + DQ + +F ++ + PD++
Sbjct: 569 NFKEARLLVDIMIKRDIE---PAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVF 625
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
Y + AY +G +K+ E ++ +M + PD + + L ID+YG+ + D + K +
Sbjct: 626 IYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRM 685
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQG------------------------KAEY-----V 347
+P+ T++ +I + A+ + + +Y +
Sbjct: 686 HEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDL 745
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F KM P+ TY IT + A +FD + + G+ N++L C
Sbjct: 746 FGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQ 805
Query: 408 NGLPTEA----DLLFENSHNMGVTPDSSTYKLL 436
GL EA D++ EN H P + KLL
Sbjct: 806 LGLYGEAIRWLDIMIENRH----LPHLDSCKLL 834
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 72/372 (19%), Positives = 143/372 (38%), Gaps = 44/372 (11%)
Query: 78 ESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQK 137
E++ LV ++++ D EP T +L + L K D++ Q ++F M
Sbjct: 572 EARLLVDIMIKR--DIEPAADTYT------------ILIDNLLKDDEFDQAHDMFDQMLS 617
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+ D IY+ I G+ + A L +M G PD +Y I A+ +
Sbjct: 618 TGSH-PDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAY----GRF 672
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
++ A G ++M + C+P+ TY+ L++ + A+ + ++ S +A + ++
Sbjct: 673 GSIDGAFGILKRMHEV-GCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFS 731
Query: 258 -------YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
Y +D +GK M + C P+ T+ I K +
Sbjct: 732 NCWRRVDYEFTLDLFGK-------------MAEHGCAPNANTYGKFITGLCKVGCLEVAH 778
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
++F + + P +NS++ + L G+A M ++ P + C + +
Sbjct: 779 RLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDS--CKLLLC 836
Query: 371 GYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
G D N +A+ +F + + +++ GL + LF G
Sbjct: 837 GLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQI 896
Query: 429 DSSTYKLLYKAY 440
TY +L + +
Sbjct: 897 HPKTYSMLIEGF 908
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 152/318 (47%), Gaps = 5/318 (1%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
++S L+ K+ + AM +FS+MR G P+ Y A+I K+ + A+ Y
Sbjct: 265 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILC----KSGRVEDAMLY 320
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F++M E P + YN L+ ++ L E+ + + + +N ++D++
Sbjct: 321 FEQMID-EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 379
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K G + E E + M KPDIIT++ LID Y D+ ++ S++ KP
Sbjct: 380 KEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCV 439
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T++++I Y K A +F++M + +P ITY I+ + A+E++ +
Sbjct: 440 TYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGI 499
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
+K G+ +++ST N +L C N L +A +F+N M + ++ T+ ++ A K
Sbjct: 500 TKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRN 559
Query: 447 ELVQKLLKRMEQNGIVPN 464
+ + L NG+VPN
Sbjct: 560 DEAKDLFVAFSSNGLVPN 577
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 144/317 (45%), Gaps = 5/317 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +IA + K AM + + M SG PD YN+++ + +A+ +
Sbjct: 126 YNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIV----FL 181
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+KM+ + +P++VTYN L+ + + +F + + L P+I TY ++ Y
Sbjct: 182 KKMRS-DGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYAT 240
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + EM +L M N P+ F++L+ +Y K++ ++ VF + P T
Sbjct: 241 KGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVT 300
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ ++I K+ A F++M +P I Y +I C+ RA E+ E+
Sbjct: 301 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 360
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G + N++++++C G E++ LF+ +GV PD TY L Y A +
Sbjct: 361 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 420
Query: 448 LVQKLLKRMEQNGIVPN 464
KLL M G+ P+
Sbjct: 421 EATKLLASMVSVGMKPD 437
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 120/254 (47%), Gaps = 2/254 (0%)
Query: 213 MERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHES-ILAPDIYTYNGVMDAYGKNGM 270
+ R P++ +YNILL C + R+ + + L + PD+ +Y+ V++ + K G
Sbjct: 44 LRRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGD 103
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
+ + S + M + P+++T+N +I + K Q DK +V +++ S P T+NS
Sbjct: 104 LDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNS 163
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
++ + + +A +KM + P +TY ++ + AR+IFD ++K G
Sbjct: 164 IVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRG 223
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
+++T +L+ Y G E L + G+ P+ + +L AY K E
Sbjct: 224 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAM 283
Query: 451 KLLKRMEQNGIVPN 464
+ +M Q G+ PN
Sbjct: 284 LVFSKMRQQGLNPN 297
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 153/350 (43%), Gaps = 6/350 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ L K+ + +EV M K + D Y+ ++ GQ + A+ +MR+
Sbjct: 129 IIAALCKAQTVDKAMEVLTTMVKS-GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSD 187
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G PD YN+L+ +L + K K +G+ KP I TY LL+ A
Sbjct: 188 GVEPDVVTYNSLMD-YLCKNGRCTEARKIFDSMTK-RGL---KPEITTYGTLLQGYATKG 242
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ +++ L + + + P+ Y ++ ++ AY K ++E V S+M+ P+ +T+
Sbjct: 243 ALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYG 302
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+I K + F+ ++ P +NS+I +AE + +M
Sbjct: 303 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 362
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ I + II + V + ++FD + ++G + T + +++ YC+ G EA
Sbjct: 363 GICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEA 422
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L + ++G+ PD TY L Y K + + L + ME +G+ P+
Sbjct: 423 TKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPD 472
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 10/222 (4%)
Query: 253 PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN--QCKPDIITFNLLIDSYGKRQAFDKME 310
PD+++YN +++ +E +L M + C PD+++++ +I+ + K DK
Sbjct: 49 PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTY 108
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+ ++ + P + T+NS+I KA+ KA V M P +TY I+ +
Sbjct: 109 STYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIV--H 166
Query: 371 GYCDNVSRAREIFDELSKL---GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
G+C + + +E L K+ G + V T N++++ C NG TEA +F++ G+
Sbjct: 167 GFCSS-GQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLK 225
Query: 428 PDSSTYKLLYKAY-TKANMKELVQKLLKRMEQNGIVPNKRFF 468
P+ +TY L + Y TK + E+ LL M +NGI PN F
Sbjct: 226 PEITTYGTLLQGYATKGALVEM-HGLLDLMVRNGIHPNHYVF 266
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 154/387 (39%), Gaps = 49/387 (12%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
K +K + + VF M++Q + Y +I ++ K G+ AM F +M + G P
Sbjct: 275 KQEKVEEAMLVFSKMRQQGLN-PNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 333
Query: 181 SVYNALITAH-------------LHTRDKAKAL---------------AKALGYFQKMKG 212
VYN+LI L D+ L + + +
Sbjct: 334 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDL 393
Query: 213 MER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
M R KP+I+TY+ L+ A +D+ L + + PD TY+ +++ Y K
Sbjct: 394 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISR 453
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
+K+ + M+S+ PDIIT+N+++ + + ++++ + S + L T+N
Sbjct: 454 MKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNI 513
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
++ K +L A +FQ + M T+ +I A+++F S G
Sbjct: 514 ILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 573
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
T M E GL E D LF + + G T DS +V+
Sbjct: 574 LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF------------IVR 621
Query: 451 KLLKRMEQN------GIVPNKRFFLEA 471
+LL+R E ++ K F LEA
Sbjct: 622 ELLQRGEITRAGTYLSMIDEKHFSLEA 648
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 22/198 (11%)
Query: 100 LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG 159
+N Y K+ R + +LF E+ S D Y+ ++ + +
Sbjct: 445 INGYCKISRMKDALVLFREMESSGVS-----------------PDIITYNIILQGLFQTR 487
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
+T A L+ + SG + + S YN + LH K K AL FQ + M+ K
Sbjct: 488 RTAAAKELYVGITKSGRQLELSTYNII----LHGLCKNKLTDDALRMFQNLCLMD-LKLE 542
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
T+NI++ A + D+ LF + L P+ +TY + + G+++E++ +
Sbjct: 543 ARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFL 602
Query: 280 RMKSNQCKPDIITFNLLI 297
M+ N C D N ++
Sbjct: 603 SMEDNGCTVDSGMLNFIV 620
>gi|218190151|gb|EEC72578.1| hypothetical protein OsI_06020 [Oryza sativa Indica Group]
Length = 738
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 128/247 (51%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+P+I+ YN+L+ + + R +++ +++ L E+ P TY ++ AY G + E
Sbjct: 315 RPDIICYNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGSLHRAEG 374
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
V+S M+ + P+ +N +D K + +K +V++ + + + TF MI YG
Sbjct: 375 VISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLMINVYG 434
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
KA+ + VF +M ++ P+ TY ++ + +A E+F+E+ + G + V
Sbjct: 435 KAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVY 494
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
NA++EAY GLP A +F +MG PD ++Y +L AY +A + E + + + +
Sbjct: 495 AYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEEL 554
Query: 457 EQNGIVP 463
+Q G+ P
Sbjct: 555 KQRGMSP 561
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 154/337 (45%), Gaps = 5/337 (1%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
KW + V W+ + + D Y+ LI GKK Q A ++ + + C P Y
Sbjct: 297 KWDLIIPVCEWILYRSSFRPDIICYNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTY 356
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
L+ A+ + A +L +A G +M+ PN YN L +AR ++ ++
Sbjct: 357 ALLLRAYCN----AGSLHRAEGVISEMRE-HGIPPNATVYNAYLDGLLKARCTEKAVEVY 411
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR 303
+ + + T+ +++ YGK V + MKS CKP+I T+ L++++ +
Sbjct: 412 QRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFARE 471
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
+K E+VF+ + + +P + +N+++ Y +A L A +F M M P +Y
Sbjct: 472 GLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASY 531
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
++ YG A +F+EL + G + + +L A+ +G T + + H
Sbjct: 532 NILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHK 591
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
G+TPD+ + AY +A + +++LL ME+ G
Sbjct: 592 SGLTPDTFALNAMLNAYARAGRLDDMERLLAAMERRG 628
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 148/302 (49%), Gaps = 12/302 (3%)
Query: 174 SGCRPDPSVYNALITAHLHTR--DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
S RPD YN LI ++ R +KA+++ AL Q C P TY +LLRA
Sbjct: 312 SSFRPDIICYNLLIESYGKKRQLNKAESIYMALLEAQ-------CVPTEDTYALLLRAYC 364
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
A ++ + + E+ E + P+ YN +D K ++ V RMK +C+ +
Sbjct: 365 NAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTE 424
Query: 292 TFNLLIDSYGK-RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
TF L+I+ YGK +Q M +VF + KP + T+ +++ + + L KAE VF++
Sbjct: 425 TFTLMINVYGKAKQPMSSM-KVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEE 483
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M + P Y ++ Y A EIF + +G + ++ N +++AY GL
Sbjct: 484 MQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGL 543
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
+A+ +FE G++P ++ LL A+ ++ ++++ ++ ++G+ P+ F L
Sbjct: 544 HEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDT-FALN 602
Query: 471 AL 472
A+
Sbjct: 603 AM 604
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 142/348 (40%), Gaps = 33/348 (9%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR------------- 194
Y+ L+ G A + SEMR G P+ +VYNA + L R
Sbjct: 356 YALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMK 415
Query: 195 ------------------DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
KAK ++ F +MK + CKPNI TY L+ A A+
Sbjct: 416 RERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIG-CKPNICTYTALVNAFAREGLC 474
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
++ +F+E+ ++ PD+Y YN +M+AY + G+ + + S M+ C+PD ++N+L
Sbjct: 475 EKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNIL 534
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
+D+YG+ + E VF+ L PT+ + ++ + ++ + E V ++
Sbjct: 535 VDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGL 594
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
TP ++ Y + + + + G D V T N + AY G +
Sbjct: 595 TPDTFALNAMLNAYARAGRLDDMERLLAAMERRG-DADVGTYNVAVNAYGRAGYVGRMEA 653
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
F G+ D T+ AY + +++ M G P+
Sbjct: 654 AFAAVAARGLAADVVTWTARMGAYARRKEYGRCVGMVEEMVDAGCYPD 701
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 133/291 (45%), Gaps = 7/291 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
L+ GK+ + + ++VF M K + Y+ L+ ++G A +F EM+
Sbjct: 428 LMINVYGKAKQPMSSMKVFNEM-KSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQ 486
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
+G PD YNAL+ A+ +A A F M+ M C+P+ +YNIL+ A +A
Sbjct: 487 AGHEPDVYAYNALMEAY----SRAGLPQGASEIFSLMQHMG-CEPDRASYNILVDAYGRA 541
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ A+F+EL + ++P + ++ ++ A+ ++G E V++++ + PD
Sbjct: 542 GLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFAL 601
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N ++++Y + D ME++ + M + + T+N + YG+A G+ E F + A
Sbjct: 602 NAMLNAYARAGRLDDMERLLAA-MERRGDADVGTYNVAVNAYGRAGYVGRMEAAFAAVAA 660
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
+T+ + Y R + +E+ G T +L A
Sbjct: 661 RGLAADVVTWTARMGAYARRKEYGRCVGMVEEMVDAGCYPDAGTARVLLAA 711
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 11/174 (6%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
L+A + G + +++ SG PD NA++ A+ A A L +++
Sbjct: 569 LLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAY--------ARAGRLDDMERL 620
Query: 211 -KGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
MER ++ TYN+ + A +A V ++ A F + LA D+ T+ M AY +
Sbjct: 621 LAAMERRGDADVGTYNVAVNAYGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAYARR 680
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
++ M C PD T +L+ + + +++ + +S MH K K
Sbjct: 681 KEYGRCVGMVEEMVDAGCYPDAGTARVLLAACSDERQVEQVTAIVRS-MHKKPK 733
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 153/327 (46%), Gaps = 12/327 (3%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ D Y+ LI + + + A L +M G +P+ Y A I + K+ +
Sbjct: 518 LPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLY----SKSGEIQ 573
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
A YF+ M PN V Y IL++ N + + FK + E L PDI Y+ +
Sbjct: 574 VAERYFKDMLS-SGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAI 632
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ + KNG KE V + PD+ +N LI + K +K Q++ ++H+
Sbjct: 633 IHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGI 692
Query: 322 KPTLPTFNSMIINYGKARLQGKAEY--VFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
P + +N++I +YG + E +F +M + +P Y +I G N+ +A
Sbjct: 693 NPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKA 752
Query: 380 REIFDELSK--LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
+F E + +G +S N++++++C +G EA LF++ + +TP+ TY +L
Sbjct: 753 LSLFHEAQQKSVG---SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILI 809
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPN 464
AY KA M E ++L ME I+PN
Sbjct: 810 DAYGKAEMMEEAEQLFLDMETRNIIPN 836
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 148/337 (43%), Gaps = 17/337 (5%)
Query: 126 LQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
++ L F+ M ++ I D YS +I + K G+T+ AM +F + +G PD +YN+
Sbjct: 608 VEALSTFKCML-EKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNS 666
Query: 186 LITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLR--ACAQARNVDQVNA 241
LI+ D + KA + +M G+ PNIV YN L+ ++ N+ +
Sbjct: 667 LISGFCKEGD----IEKASQLYDEMLHNGI---NPNIVVYNTLINDYGYCKSGNLTEAFK 719
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP--DIITFNLLIDS 299
LF E+ ++PD Y Y ++D GK G +E LS Q K + FN LIDS
Sbjct: 720 LFDEMISKGISPDGYIYCILIDGCGKEG---NLEKALSLFHEAQQKSVGSLSAFNSLIDS 776
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
+ K + ++F ++ K P + T+ +I YGKA + +AE +F M P+
Sbjct: 777 FCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPN 836
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
+TY ++ Y N + +F ++ G M AYC G EA L
Sbjct: 837 TLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLN 896
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
S G+ + + L K V +LL M
Sbjct: 897 KSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEM 933
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 143/319 (44%), Gaps = 9/319 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I + K G+ AM LF+EM +G PD YN LI +L + D +AKA
Sbjct: 384 YNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHD----MAKACELL 439
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+MK + P+ TY++L+ + ++ + N + ++ + + P+++ Y ++ AY +
Sbjct: 440 AEMKA-RKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQ 498
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ +L M +N PD+ +N LI + + ++ + + + KP T
Sbjct: 499 ESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHT 558
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRAREIFDE 385
+ + I Y K+ AE F+ M + P+ + Y +I G+CD N A F
Sbjct: 559 YGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIK--GHCDVGNTVEALSTFKC 616
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ + G + +A++ + NG EA +F GV PD Y L + K
Sbjct: 617 MLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGD 676
Query: 446 KELVQKLLKRMEQNGIVPN 464
E +L M NGI PN
Sbjct: 677 IEKASQLYDEMLHNGINPN 695
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 133/300 (44%), Gaps = 7/300 (2%)
Query: 166 W-LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYN 224
W ++ M + PD Y +I AH D K L +K CKPN+ TYN
Sbjct: 227 WKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKG-KMVLSEMEK-----ECKPNLFTYN 280
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
+ Q VD+ + K + E L PD +TY ++D + K KE + + M S+
Sbjct: 281 AFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSS 340
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
P+ T+ LID + K ++ ++ ++ K + T+N+MI KA KA
Sbjct: 341 GLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKA 400
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
+F +M P TY +I Y ++++A E+ E+ T + ++
Sbjct: 401 MSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISG 460
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
C + +A+ + + GV P+ Y L KAY + + E+ +LLK M NG++P+
Sbjct: 461 LCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPD 520
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 159/352 (45%), Gaps = 10/352 (2%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ LEV + M ++ D Y+ L+ K+ +++ A +F M +SG P+ Y AL
Sbjct: 294 EALEVKKLMM-EKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTAL 352
Query: 187 ITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
I + K + +AL +M +G+ K N+VTYN ++ A+A + + +LF
Sbjct: 353 IDGFI----KEGNIEEALRIKDEMITRGL---KLNVVTYNAMIGGIAKAGEMAKAMSLFN 405
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
E+ + + PD +TYN ++D Y K+ + + +L+ MK+ + P T+++LI
Sbjct: 406 EMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSS 465
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
K +V ++ + KP + + ++I Y + A + + M A P Y
Sbjct: 466 DLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYN 525
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
C+I V A+ + ++ + G T A + Y +G A+ F++ +
Sbjct: 526 CLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSS 585
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
G+ P++ Y +L K + K M + G++P+ R + + + S
Sbjct: 586 GIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLS 637
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 143/322 (44%), Gaps = 8/322 (2%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ + IY+ LI G T A+ F M G PD Y+A+I H+ K
Sbjct: 588 VPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAII----HSLSKNGKTK 643
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+A+G F K P++ YN L+ + ++++ + L+ E+ + + P+I YN +
Sbjct: 644 EAMGVFLKFLK-TGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTL 702
Query: 262 MDAYG--KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
++ YG K+G + E + M S PD + +LID GK +K +F
Sbjct: 703 INDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHE-AQQ 761
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
K +L FNS+I ++ K +A +F M K TP+ +TY +I YG + + A
Sbjct: 762 KSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEA 821
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
++F ++ T ++L +Y G + LF++ G+ D+ Y ++ A
Sbjct: 822 EQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASA 881
Query: 440 YTKANMKELVQKLLKRMEQNGI 461
Y K KLL + GI
Sbjct: 882 YCKEGKSLEALKLLNKSLVEGI 903
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 118/246 (47%), Gaps = 1/246 (0%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P ++ N L+R +A + ++ + E+ + PD+YTY V+ A+ K G + + + V
Sbjct: 205 PTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMV 264
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
LS M+ +CKP++ T+N I + A D+ +V K +M P T+ ++ + K
Sbjct: 265 LSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCK 323
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
+ +A+ +F+ M + P+ TY +I + N+ A I DE+ G + V T
Sbjct: 324 QKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVT 383
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
NAM+ G +A LF G+ PD+ TY LL Y K++ +LL M+
Sbjct: 384 YNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMK 443
Query: 458 QNGIVP 463
+ P
Sbjct: 444 ARKLTP 449
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 81/187 (43%), Gaps = 1/187 (0%)
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
++ F++ ID + ++ VF + + PTL N+++ + KA + G V+
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
M K P TY +I + +V + + + E+ K K + T NA + C
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKP-NLFTYNAFIGGLCQT 289
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G EA + + G+ PD TY LL + K + + + + M +G+ PN+ +
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349
Query: 469 LEALETF 475
++ F
Sbjct: 350 TALIDGF 356
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 106/246 (43%), Gaps = 7/246 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + GK + L +F Q++ + ++ LI K G+ A LF +M +
Sbjct: 738 ILIDGCGKEGNLEKALSLFHEAQQKS--VGSLSAFNSLIDSFCKHGKVIEARELFDDMVD 795
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
P+ Y LI A+ KA+ + +A F M+ PN +TY LL + Q
Sbjct: 796 KKLTPNIVTYTILIDAY----GKAEMMEEAEQLFLDME-TRNIIPNTLTYTSLLLSYNQI 850
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
N ++ +LFK++ +A D Y + AY K G E +L++ K + F
Sbjct: 851 GNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVF 910
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+ LI K + + ++ + + + T N++++ + K+ + +A V M
Sbjct: 911 DALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQR 970
Query: 354 MKYTPS 359
+ + P+
Sbjct: 971 LGWVPT 976
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 156/338 (46%), Gaps = 11/338 (3%)
Query: 126 LQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
++ L F+ M ++ I D YS +I + K G+T+ AM +F + +G PD +YN+
Sbjct: 608 VEALSTFKCML-EKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNS 666
Query: 186 LITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
LI+ D + KA + +M G+ PNIV YN L+ + V + LF
Sbjct: 667 LISGFCKEGD----IEKASQLYDEMLHNGI---NPNIVVYNTLINGLCKLGEVTKARELF 719
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR 303
E+ E L PD+ TY+ ++D Y K+G + E + M S PD + +LID GK
Sbjct: 720 DEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKE 779
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
+K +F K +L FNS+I ++ K +A +F M K TP+ +TY
Sbjct: 780 GNLEKALSLFHE-AQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTY 838
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+I YG + + A ++F ++ T ++L +Y G + LF++
Sbjct: 839 TILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEA 898
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
G+ D+ Y ++ AY K KLL + GI
Sbjct: 899 RGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGI 936
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 154/357 (43%), Gaps = 39/357 (10%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ D Y+ LI + + + A L +M G +P+ Y A I + K+ +
Sbjct: 518 LPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLY----SKSGEIQ 573
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
A YF+ M PN V Y IL++ N + + FK + E L PDI Y+ +
Sbjct: 574 VAERYFKDMLS-SGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAI 632
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ + KNG KE V + PD+ +N LI + K +K Q++ ++H+
Sbjct: 633 IHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGI 692
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P + +N++I K KA +F ++ P +TY II Y N++ A +
Sbjct: 693 NPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFK 752
Query: 382 IFDE----------------LSKLGKDMKV------------------STLNAMLEAYCM 407
+FDE + GK+ + S N++++++C
Sbjct: 753 LFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCK 812
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+G EA LF++ + +TP+ TY +L AY KA M E ++L ME I+PN
Sbjct: 813 HGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPN 869
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 143/319 (44%), Gaps = 9/319 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I + K G+ AM LF+EM +G PD YN LI +L + D +AKA
Sbjct: 384 YNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHD----MAKACELL 439
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+MK + P+ TY++L+ + ++ + N + ++ + + P+++ Y ++ AY +
Sbjct: 440 AEMKA-RKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQ 498
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ +L M +N PD+ +N LI + + ++ + + + KP T
Sbjct: 499 ESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHT 558
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRAREIFDE 385
+ + I Y K+ AE F+ M + P+ + Y +I G+CD N A F
Sbjct: 559 YGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIK--GHCDVGNTVEALSTFKC 616
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ + G + +A++ + NG EA +F GV PD Y L + K
Sbjct: 617 MLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGD 676
Query: 446 KELVQKLLKRMEQNGIVPN 464
E +L M NGI PN
Sbjct: 677 IEKASQLYDEMLHNGINPN 695
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 133/300 (44%), Gaps = 7/300 (2%)
Query: 166 W-LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYN 224
W ++ M + PD Y +I AH D K L +K CKPN+ TYN
Sbjct: 227 WKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKG-KMVLSEMEK-----ECKPNLFTYN 280
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
+ Q VD+ + K + E L PD +TY ++D + K KE + + M S+
Sbjct: 281 AFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSS 340
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
P+ T+ LID + K ++ ++ ++ K + T+N+MI KA KA
Sbjct: 341 GLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKA 400
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
+F +M P TY +I Y ++++A E+ E+ T + ++
Sbjct: 401 MSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISG 460
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
C + +A+ + + GV P+ Y L KAY + + E+ +LLK M NG++P+
Sbjct: 461 LCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPD 520
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 159/352 (45%), Gaps = 10/352 (2%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ LEV + M ++ D Y+ L+ K+ +++ A +F M +SG P+ Y AL
Sbjct: 294 EALEVKKLMM-EKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTAL 352
Query: 187 ITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
I + K + +AL +M +G+ K N+VTYN ++ A+A + + +LF
Sbjct: 353 IDGFI----KEGNIEEALRIKDEMITRGL---KLNVVTYNAMIGGIAKAGEMAKAMSLFN 405
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
E+ + L PD +TYN ++D Y K+ + + +L+ MK+ + P T+++LI
Sbjct: 406 EMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSS 465
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
K +V ++ + KP + + ++I Y + A + + M A P Y
Sbjct: 466 DLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYN 525
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
C+I V A+ + ++ + G T A + Y +G A+ F++ +
Sbjct: 526 CLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSS 585
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
G+ P++ Y +L K + K M + G++P+ R + + + S
Sbjct: 586 GIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLS 637
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 119/247 (48%), Gaps = 1/247 (0%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P ++ N L+R +A + ++ + E+ + PD+YTY V+ A+ K G + + + V
Sbjct: 205 PTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMV 264
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
LS M+ +CKP++ T+N I + A D+ +V K +M P T+ ++ + K
Sbjct: 265 LSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCK 323
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
+ +A+ +F+ M + P+ TY +I + N+ A I DE+ G + V T
Sbjct: 324 QKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVT 383
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
NAM+ G +A LF G+ PD+ TY LL Y K++ +LL M+
Sbjct: 384 YNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMK 443
Query: 458 QNGIVPN 464
+ P+
Sbjct: 444 ARKLTPS 450
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 81/187 (43%), Gaps = 1/187 (0%)
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
++ F++ ID + ++ VF + + PTL N+++ + KA + G V+
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
M K P TY +I + +V + + + E+ K K + T NA + C
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECKP-NLFTYNAFIGGLCQT 289
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G EA + + G+ PD TY LL + K + + + + M +G+ PN+ +
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349
Query: 469 LEALETF 475
++ F
Sbjct: 350 TALIDGF 356
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 106/246 (43%), Gaps = 7/246 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + GK + L +F Q++ + ++ LI K G+ A LF +M +
Sbjct: 771 ILIDGCGKEGNLEKALSLFHEAQQKS--VGSLSAFNSLIDSFCKHGKVIEARELFDDMVD 828
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
P+ Y LI A+ KA+ + +A F M+ PN +TY LL + Q
Sbjct: 829 KKLTPNIVTYTILIDAY----GKAEMMEEAEQLFLDME-TRNIIPNTLTYTSLLLSYNQI 883
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
N ++ +LFK++ +A D Y + AY K G E +L++ K + F
Sbjct: 884 GNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVF 943
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+ LI K + + ++ + + + T N++++ + K+ + +A V M
Sbjct: 944 DALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQR 1003
Query: 354 MKYTPS 359
+ + P+
Sbjct: 1004 LGWVPT 1009
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 163/351 (46%), Gaps = 7/351 (1%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM 171
C L L K ++ + V++ M K+R + ++ I + K G+ A + ++
Sbjct: 168 CNPLLSALVKGNETGEMQYVYKEMIKRRIQ-PNLTTFNIFINGLCKAGKLNKAEDVIEDI 226
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
+ G P+ YN LI H + A + +A ++M + C PN +T+N L+
Sbjct: 227 KAWGFSPNIVTYNTLIDGHCK-KGSAGKMYRADAILKEMLANKIC-PNEITFNTLIDGFC 284
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ NV F+E+ L P+I TYN +++ NG + E ++ +M KP+I+
Sbjct: 285 KDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIV 344
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
TFN LI+ + K++ + ++F + P TFN+MI + KA + + + M
Sbjct: 345 TFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSM 404
Query: 352 TAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
P+ TY C+I G C NV A+++ +E+ V T N ++ +C +G
Sbjct: 405 LDEGIFPNVSTYNCLIA--GLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDG 462
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
P++A+ L N+GV P+ TY L Y + K+ +ME+ G
Sbjct: 463 EPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEG 513
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 138/271 (50%), Gaps = 9/271 (3%)
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
F EM+ G +P+ YN+LI L K L +A+ + KM G+ KPNIVT+N L+
Sbjct: 296 FEEMQRQGLKPNIVTYNSLING-LSNNGK---LDEAIALWDKMVGL-GLKPNIVTFNALI 350
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
+ + + + LF ++ E L P+ T+N ++DA+ K GM++E ++ + M
Sbjct: 351 NGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIF 410
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P++ T+N LI + Q +++ + + + K + T+N +I + K KAE +
Sbjct: 411 PNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKL 470
Query: 348 FQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+M + P+ +TY + M GYC N+ A ++ ++ K GK V T N +++ +
Sbjct: 471 LGEMLNVGVKPNHVTYNTL--MDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGF 528
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
C G +A+ L G+ P+ +TY ++
Sbjct: 529 CKTGKLEDANRLLNEMLEKGLNPNRTTYDVV 559
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 139/309 (44%), Gaps = 23/309 (7%)
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL---RACAQARNVDQVN------- 240
LH +K +K + K+ E+ + V +++LL R CA A D +
Sbjct: 85 LHLLANSKKYSKVRSFLDKLVKNEKHTVSSVFHSLLLGGDRPCANALITDMLVLAYVTNL 144
Query: 241 ------ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+F+ + + + + N ++ A K EM+ V M + +P++ TFN
Sbjct: 145 EIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFN 204
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK---AEYVFQKM 351
+ I+ K +K E V + + P + T+N++I + K GK A+ + ++M
Sbjct: 205 IFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEM 264
Query: 352 TAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
A K P+ IT+ +I G+C +NV A+ F+E+ + G + T N+++ NG
Sbjct: 265 LANKICPNEITFNTLID--GFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNG 322
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFL 469
EA L++ +G+ P+ T+ L + K M + +KL + + +VPN F
Sbjct: 323 KLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFN 382
Query: 470 EALETFSSS 478
++ F +
Sbjct: 383 TMIDAFCKA 391
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 5/141 (3%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
AD Y+ LI K G+ A L EM N G +P+ YN L+ + KA K
Sbjct: 446 ADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYC-MEGNLKAALK 504
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
+K E + N+VTYN+L++ + ++ N L E+ E L P+ TY+ V
Sbjct: 505 VRTQMEK----EGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVR 560
Query: 263 DAYGKNGMIKEMESVLSRMKS 283
+ G I ++E L + S
Sbjct: 561 LEMLEKGFIPDIEGHLYNISS 581
>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
Length = 496
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 144/310 (46%), Gaps = 9/310 (2%)
Query: 157 KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK--GME 214
K G A +F EM G P+ Y AL+ + + K A F++M+ G+E
Sbjct: 50 KGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFA----LFEEMRRGGVE 105
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
PN+ TYN L+ + ++ +LF E+ + ++ +YN ++ ++G + +
Sbjct: 106 ---PNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDA 162
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
+L M++ +P IITFNLL+D YGK F + + +P+ T+N +I
Sbjct: 163 AKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAG 222
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
+ +AR +A M P+ +TY +I + +++ +A EI + K G ++
Sbjct: 223 FCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVD 282
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
T ++ A CM G +A LF++ GV P + Y ++ Y + KL+
Sbjct: 283 AHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIM 342
Query: 455 RMEQNGIVPN 464
M Q G++PN
Sbjct: 343 EMRQKGLIPN 352
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 111/242 (45%), Gaps = 5/242 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LIA + + G+ A L MR G RP +N L+ + KA ++ AL +F
Sbjct: 146 YNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGY----GKAGKMSNALPFF 201
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+MK +P+ VTYN+L+ +AR++ + N ++ E L P TY ++D++ +
Sbjct: 202 NQMKA-AGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFAR 260
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ + +L+ M+ + D T+ +L+ + ++F+S+ +P+
Sbjct: 261 ENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVI 320
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
++ MI YG+ KA + +M P+ +Y I + D A + D++
Sbjct: 321 YDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDME 380
Query: 388 KL 389
+
Sbjct: 381 TI 382
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/258 (18%), Positives = 101/258 (39%), Gaps = 35/258 (13%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
++ L+ C + +V + +F E+ LAP+ TY +M Y +G ++ ++
Sbjct: 37 DVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALF 96
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
M+ +P++ T+N LI + + F++ +F + + ++N++I +
Sbjct: 97 EEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRH 156
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
A + M PS IT+ ++ YG +S A F++ MK +
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQ-------MKAA-- 207
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
G P + TY +L + +A + L M++
Sbjct: 208 --------------------------GFQPSAVTYNMLIAGFCRARDMTRANRALSDMKE 241
Query: 459 NGIVPNKRFFLEALETFS 476
G+ P K + +++F+
Sbjct: 242 RGLEPTKVTYTILIDSFA 259
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 91/232 (39%), Gaps = 8/232 (3%)
Query: 269 GMIKEMESVLSR-MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G ++ ++L+R KS D+ L++ K + +VF + P T
Sbjct: 16 GDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVT 75
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ +++ Y + K +F++M P+ TY C+I + RAR +FDE+
Sbjct: 76 YTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMP 135
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G V + N ++ C +G +A L + G P T+ LL Y KA
Sbjct: 136 VRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMS 195
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTRSLSTAK 499
+M+ G P+ T++ +AG T R+LS K
Sbjct: 196 NALPFFNQMKAAGFQPSAV-------TYNMLIAGFCRARDMTRANRALSDMK 240
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 153/322 (47%), Gaps = 11/322 (3%)
Query: 146 GIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALG 205
G++ L +V+ G A FS+M+ P N L LH K L K G
Sbjct: 64 GVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGL----LH---KFAKLGKTDG 116
Query: 206 ---YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
+F+ M G KP + TYNI++ + +++ LF+E+ L PD TYN ++
Sbjct: 117 VKRFFKDMIGAGS-KPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMI 175
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D YGK G + + MKS C+PD+IT+N LI+ + K K + ++ + S K
Sbjct: 176 DGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLK 235
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P + ++++++ + K + +A + M + + P+ TY ++ N+S A +
Sbjct: 236 PNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRL 295
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+E+ ++G + V T A+++ C EA+ LF GV P+ ++Y L + K
Sbjct: 296 ANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVK 355
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
A + +LL ++ GI P+
Sbjct: 356 AKNMDRALELLNELKGRGIQPD 377
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 161/367 (43%), Gaps = 45/367 (12%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K R I DT Y+ +I GK G+ ++ F EM++ C PD YN+LI K
Sbjct: 160 KFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFC----K 215
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+ L K L ++++MK KPN+V+Y+ L+ A + + Q + ++ P+ +
Sbjct: 216 SGKLPKGLEFYREMK-QSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEF 274
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TY ++DA K G + + + + M + +++T+ LID + + E++F +
Sbjct: 275 TYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKM 334
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--- 373
+ + P L ++N++I + KA+ +A + ++ P + Y I +G C
Sbjct: 335 VTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFI--WGLCGLE 392
Query: 374 ----------------------------------DNVSRAREIFDELSKLGKDMKVSTLN 399
N + + +E+ +L ++ V T
Sbjct: 393 KIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFC 452
Query: 400 AMLEAYCMNGLPTEA-DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
+++ C N L ++A D S++ G+ P+++ Y + K N + L ++M Q
Sbjct: 453 VLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQ 512
Query: 459 NGIVPNK 465
G+VP++
Sbjct: 513 EGLVPDR 519
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 101/246 (41%)
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
C P ++ L +++ F ++ + P + NG++ + K G ++
Sbjct: 59 CVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVK 118
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
M KP + T+N++ID K + +F+ + P T+NSMI Y
Sbjct: 119 RFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGY 178
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
GK Y F++M +M P ITY +I + + + E + E+ + G V
Sbjct: 179 GKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNV 238
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+ + +++A+C + +A + + +G P+ TY L A K +L
Sbjct: 239 VSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANE 298
Query: 456 MEQNGI 461
M + G+
Sbjct: 299 MLEVGV 304
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 100/226 (44%), Gaps = 2/226 (0%)
Query: 242 LFKELHES--ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
+F EL + + P ++ + GM++E S+MK + P + N L+
Sbjct: 48 VFDELWSTRNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHK 107
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
+ K D +++ FK ++ + KPT+ T+N MI K A +F++M P
Sbjct: 108 FAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPD 167
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
+TY +I YG + F+E+ + + V T N+++ +C +G + +
Sbjct: 168 TVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYR 227
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
G+ P+ +Y L A+ K +M + K M + G VPN+
Sbjct: 228 EMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNE 273
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 73/181 (40%), Gaps = 4/181 (2%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
A+T IY+ L+ K G + L EM+ + LI K K ++K
Sbjct: 411 ANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLC----KNKLVSK 466
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A+ YF +M +PN Y ++ + V LF+++ + L PD Y +M
Sbjct: 467 AIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLM 526
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D K G + E ++ +M K D++ + L+ + + K + ++ +
Sbjct: 527 DGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEIL 586
Query: 323 P 323
P
Sbjct: 587 P 587
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 77/174 (44%), Gaps = 9/174 (5%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K+ + ++ F M + +Y+ +I + K+ Q + A LF +M
Sbjct: 453 VLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQ 512
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK--GMERCKPNIVTYNILLRACA 231
G PD + Y +L+ +L K + +AL KM GM K +++ Y L+ +
Sbjct: 513 EGLVPDRTAYTSLMDGNL----KQGNMLEALALRDKMAEIGM---KLDLLAYTSLVWGFS 565
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ 285
Q + + + +E+ + PD GV+ + + G I E + S + +Q
Sbjct: 566 QCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELGCIDEAVGLQSYLMKHQ 619
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 154/321 (47%), Gaps = 5/321 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +++ LI K+ + AM +FS+MR G P+ Y A+I K+ ++ A
Sbjct: 370 DHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILC----KSGSVDDA 425
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ YF++M E PNI+ Y L+ + D+ L E+ + + + +N ++
Sbjct: 426 MLYFEQMID-EGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIH 484
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
++ K G + E E + M KP++IT++ LID Y D+ ++ S+ KP
Sbjct: 485 SHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKP 544
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T+N++I Y + A +F++M + +P+ ITY I+ + + A+E++
Sbjct: 545 DCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELY 604
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
++K G +++ST N +L C N L EA +F+N + ++ T+ ++ A K
Sbjct: 605 VGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKV 664
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+ + L NG+VPN
Sbjct: 665 GRNDEAKDLFVAFSSNGLVPN 685
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 151/322 (46%), Gaps = 7/322 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS +IA + K AM + + M +G P+ YN++ LH ++ +A
Sbjct: 230 DVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSI----LHGYCSSEQPKEA 285
Query: 204 LGYFQKMKGMERCKPNIVTYNILLR-ACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
+G+ +KM+ + +P++VTYN L+ C R+ + +F + + L PDI TY ++
Sbjct: 286 IGFLKKMRS-DGVEPDVVTYNSLMDYLCKNGRST-EARKIFDSMTKRGLEPDIATYCTLL 343
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
Y G + EM ++L M N PD FN+LI +Y K++ D+ VF +
Sbjct: 344 QGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLN 403
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P + T+ ++I K+ A F++M TP+ I Y +I D +A E+
Sbjct: 404 PNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEEL 463
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
E+ G + N+++ ++C G E++ LF+ +GV P+ TY L Y
Sbjct: 464 ILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCL 523
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
A + KLL M G+ P+
Sbjct: 524 AGKMDEATKLLSSMFSVGMKPD 545
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 139/320 (43%), Gaps = 7/320 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + G+ L + G R + + L+ + + A+ L
Sbjct: 90 YGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRM 149
Query: 208 QKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNAL--FKELHESILAPDIYTYNGVMDA 264
++ C P++ + ILL+ C + R+ + + L + APD+ +Y V++
Sbjct: 150 TELS----CMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVING 205
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ K G + S M + PD++T++ +I + K QA DK +V +++ + P
Sbjct: 206 FFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPN 265
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
T+NS++ Y + +A +KM + P +TY ++ + AR+IFD
Sbjct: 266 CMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFD 325
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
++K G + ++T +L+ Y G E L + G+ PD + +L AY K
Sbjct: 326 SMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQE 385
Query: 445 MKELVQKLLKRMEQNGIVPN 464
+ + +M Q+G+ PN
Sbjct: 386 KVDEAMLVFSKMRQHGLNPN 405
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 135/304 (44%), Gaps = 5/304 (1%)
Query: 165 MWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYN 224
+ + ++ R G PD Y +I D KA + Y + + R P++VTY+
Sbjct: 181 LHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYST---YHEMLD--RRISPDVVTYS 235
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
++ A + + +D+ + + ++ + P+ TYN ++ Y + KE L +M+S+
Sbjct: 236 SIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSD 295
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
+PD++T+N L+D K + ++F S+ +P + T+ +++ Y +
Sbjct: 296 GVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEM 355
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
+ M P + +I Y + V A +F ++ + G + V T A++
Sbjct: 356 HALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGI 415
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
C +G +A L FE + G+TP+ Y L + + + ++L+ M GI N
Sbjct: 416 LCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLN 475
Query: 465 KRFF 468
FF
Sbjct: 476 TIFF 479
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 123/256 (48%), Gaps = 12/256 (4%)
Query: 221 VTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+T+ LL+ CA R D ++ + + + E PD+++ ++ +E +L
Sbjct: 123 ITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLH 182
Query: 280 RMKSNQ---CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
M ++ PD++++ +I+ + K DK + ++ + P + T++S+I
Sbjct: 183 MMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALC 242
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL---GKDM 393
K + KA V M P+ +TY I ++GYC + + +E L K+ G +
Sbjct: 243 KGQAMDKAMEVLTTMVKNGVMPNCMTYNSI--LHGYCSS-EQPKEAIGFLKKMRSDGVEP 299
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY-TKANMKELVQKL 452
V T N++++ C NG TEA +F++ G+ PD +TY L + Y TK + E+ L
Sbjct: 300 DVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEM-HAL 358
Query: 453 LKRMEQNGIVPNKRFF 468
L M +NGI P+ F
Sbjct: 359 LDLMVRNGIHPDHHVF 374
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 117/284 (41%), Gaps = 8/284 (2%)
Query: 201 AKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
A A+ + +M G + P + TY IL+ C +A +D A + + + T+
Sbjct: 66 AAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITF 125
Query: 259 NGVMDAYGKNGMIKE-MESVLSRMKSNQCKPDIITFNLLI----DSYGKRQAFDKMEQVF 313
++ + + M+ VL RM C PD+ + +L+ D ++A + + +
Sbjct: 126 TPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMA 185
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
P + ++ ++I + K KA + +M + +P +TY II
Sbjct: 186 DD-RGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKG 244
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ +A E+ + K G T N++L YC + P EA + + GV PD TY
Sbjct: 245 QAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTY 304
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
L K +K+ M + G+ P+ + L+ +++
Sbjct: 305 NSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYAT 348
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 82/191 (42%), Gaps = 13/191 (6%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS LI G+ A L S M + G +PD YN LI + + + AL F
Sbjct: 514 YSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYC----RVSRMDDALALF 569
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M PNI+TYNI+L+ R L+ + +S ++ TYN ++ K
Sbjct: 570 KEMVS-SGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCK 628
Query: 268 NGMIKEMESVLSRMKSNQCKPDII----TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
N + E RM N C D+ TFN++I + K D+ + +F + + P
Sbjct: 629 NNLTDEA----LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVP 684
Query: 324 TLPTFNSMIIN 334
T+ M N
Sbjct: 685 NYWTYRLMAEN 695
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 80/173 (46%), Gaps = 5/173 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI + + A+ LF EM +SG P+ YN ++ HTR A A
Sbjct: 545 DCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELY 604
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+G + +E + TYNI+L + D+ +F+ L + L + T+N ++
Sbjct: 605 VGITKSGTQLE-----LSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 659
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
A K G E + + SN P+ T+ L+ ++ + ++++Q+F S+
Sbjct: 660 ALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSM 712
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 84/208 (40%), Gaps = 10/208 (4%)
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY-G 336
++R + + P + T+ +LI + D +++ + TF ++
Sbjct: 75 MARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCA 134
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV- 395
R + V ++MT + P + C I + G CD +R++E + L + D
Sbjct: 135 DKRTSDAMDIVLRRMTELSCMPD--VFSCTILLKGLCDE-NRSQEALELLHMMADDRGGG 191
Query: 396 STLNAMLEAYCMNGLPTEADL--LFENSHNM---GVTPDSSTYKLLYKAYTKANMKELVQ 450
S + + +NG E D + H M ++PD TY + A K +
Sbjct: 192 SAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAM 251
Query: 451 KLLKRMEQNGIVPNKRFFLEALETFSSS 478
++L M +NG++PN + L + SS
Sbjct: 252 EVLTTMVKNGVMPNCMTYNSILHGYCSS 279
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 153/347 (44%), Gaps = 9/347 (2%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
E+G DK + L M + +Y+ LI K G LF +M
Sbjct: 163 EVGYLDKGFEVLGQMEEMGLS----PNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVV 218
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
+ Y LI K + ++KMK + PN+ TYN ++ C ++
Sbjct: 219 ANQYTYTVLINGFFKMGLKKDGIE----LYEKMK-LTGIVPNVYTYNSMICRCCNDGKLN 273
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
LF E+ E +A ++ TYN ++ + + E E ++ RMK + P++I++N LI
Sbjct: 274 NAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLI 333
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
D Y DK +F + S + P+L T+N +I + +A+ + ++M A +
Sbjct: 334 DGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLS 393
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
PS +TY ++ DN+ +A +I+ + K G + ++ C+ G EA L
Sbjct: 394 PSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKL 453
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
F++ M + P+ Y + Y K +LLK M +NG+VPN
Sbjct: 454 FKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPN 500
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 140/307 (45%), Gaps = 16/307 (5%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A++ ++M G P + +N L+ + K+ KA F + KG K ++ ++
Sbjct: 101 ALFYXNQMIGRGLVPGSNTFNNLLILLI----KSNFFEKAWRVFNETKG--NVKLDVYSF 154
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
I+++ C + +D+ + ++ E L+P++ Y ++D KNG I+ + + +M
Sbjct: 155 GIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGE 214
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII---NYGKARL 340
+ T+ +LI+ + K ++++ + + P + T+NSMI N GK
Sbjct: 215 LDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLN- 273
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTL 398
A +F +M + +TY +I G C V A + + + G + +
Sbjct: 274 --NAFELFDEMRERGVACNVVTYNTLIG--GLCQERRVLEAERLMCRMKRDGLSPNLISY 329
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N +++ YC G +A LF + G +P +TY +L +++A V +++ ME
Sbjct: 330 NTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEA 389
Query: 459 NGIVPNK 465
G+ P+K
Sbjct: 390 RGLSPSK 396
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 134/315 (42%), Gaps = 49/315 (15%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
E+F M ++R + Y+ LI + ++ + A L M+ G P+ YN LI
Sbjct: 276 FELFDEM-RERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLID 334
Query: 189 AH--LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
+ + DKA +L F +MK + P++ TYNIL+ ++A+N V + +E+
Sbjct: 335 GYCSIGNLDKASSL------FNQMKSSGQ-SPSLATYNILIAGFSEAKNSAGVTDMVREM 387
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
L+P TY +MDA ++ I++ + S M+ DI + +LI
Sbjct: 388 EARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDM 447
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ ++FKSL KP +N+MI
Sbjct: 448 KEASKLFKSLDEMHLKPNDVIYNTMI---------------------------------- 473
Query: 367 ITMYGYCDNVS--RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
YGYC S RA + E+ + G V++ N+ + C + TEA++L ++ +
Sbjct: 474 ---YGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIEL 530
Query: 425 GVTPDSSTYKLLYKA 439
G+ P S + ++ KA
Sbjct: 531 GLKPSISIWNMISKA 545
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 145/335 (43%), Gaps = 19/335 (5%)
Query: 167 LFSEMRNSGCRPDPS---VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
LF E+ P+ ++ A+I AH+ +++ +AL Y +M G P T+
Sbjct: 66 LFHELTQPHLDSFPTHVLIHEAIINAHV----RSQLPEQALFYXNQMIG-RGLVPGSNTF 120
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
N LL ++ ++ +F E ++ D+Y++ ++ + G + + VL +M+
Sbjct: 121 NNLLILLIKSNFFEKAWRVFNETKGNV-KLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEE 179
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
P+++ + LID K ++ +Q+F + T+ +I + K L+
Sbjct: 180 MGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKD 239
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
+++KM P+ TY +I ++ A E+FDE+ + G V T N ++
Sbjct: 240 GIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIG 299
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
C EA+ L G++P+ +Y L Y + L +M+ +G P
Sbjct: 300 GLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSP 359
Query: 464 NKRFFLEALETFSSSLAG---SQSGSAKTDLTRSL 495
+L T++ +AG +++ + TD+ R +
Sbjct: 360 -------SLATYNILIAGFSEAKNSAGVTDMVREM 387
>gi|255540881|ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550620|gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 876
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 153/315 (48%), Gaps = 5/315 (1%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L F W+++Q + D Y+ ++ ++G+ Q L +M GC+P+ YN LI
Sbjct: 364 LNFFYWLKRQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLI- 422
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
H+ +A L A+ F +M+ + C+P+ VTY L+ A+A +D +++ +
Sbjct: 423 ---HSYGRANYLNDAVDVFNEMQRVG-CEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQA 478
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
+ L+PD +TY+ +++ GK G + + M C P+++T+N++I K + +
Sbjct: 479 AGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQS 538
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
++++ + + +P T++ ++ G +AE VF +M + P Y ++
Sbjct: 539 ALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVD 598
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
++G NV +A + + + G V T N++L A+ +A L ++ +G+ P
Sbjct: 599 LWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKLADAYNLLQSMLELGLNP 658
Query: 429 DSSTYKLLYKAYTKA 443
TY LL T+A
Sbjct: 659 SLQTYTLLLSCCTEA 673
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 114/262 (43%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
AL +F +K + TY ++ +A+ +N L ++ + P++ TYN ++
Sbjct: 363 ALNFFYWLKRQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLI 422
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+YG+ + + V + M+ C+PD +T+ LID + K D ++++ + +
Sbjct: 423 HSYGRANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLS 482
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P T++ +I GKA A +F +M P+ +TY +I + N A ++
Sbjct: 483 PDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKL 542
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+ ++ G T + ++E G EA+ +F PD Y LL + K
Sbjct: 543 YRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGK 602
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
A E + + M G+ PN
Sbjct: 603 AGNVEKAWQWYQTMLNTGLRPN 624
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 140/306 (45%), Gaps = 14/306 (4%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
LE+++ MQ DT YS +I +GK G A LF EM GC P+ YN +I
Sbjct: 470 LEMYQRMQAAG-LSPDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIA 528
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
+ KA+ AL ++ M+ +P+ VTY+I++ +D+ A+F E+
Sbjct: 529 ----LQAKARNYQSALKLYRDMQSAG-FQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKR 583
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
PD Y ++D +GK G +++ M + +P++ T N L+ ++ +
Sbjct: 584 KNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKLAD 643
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY---VFQKMTAMKYTPSFITYEC 365
+ +S++ P+L T+ ++ +AR + Y ++ ++ A+ P+ +
Sbjct: 644 AYNLLQSMLELGLNPSLQTYTLLLSCCTEAR----SPYDMGIYCELMAVTGHPAHMFLLS 699
Query: 366 IITMYGYCDNV-SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
+ + NV A + D + ++ K ++A+++ +GL EA ++E +
Sbjct: 700 LPSAGPDGQNVRDHASKFLDLMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQR 759
Query: 425 GVTPDS 430
V PD+
Sbjct: 760 NVYPDA 765
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 106/245 (43%), Gaps = 14/245 (5%)
Query: 238 QVNALFKELHESILA--------------PDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
Q N + K+L + +A D +TY ++ G+ + +L +M
Sbjct: 349 QANQVLKQLQDHTVALNFFYWLKRQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVK 408
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+ C+P+++T+N LI SYG+ + VF + +P T+ ++I + KA
Sbjct: 409 DGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLDF 468
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A ++Q+M A +P TY II G +++ A ++F E+ + G + T N M+
Sbjct: 469 ALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIA 528
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
A L+ + + G PD TY ++ + + + + M++ VP
Sbjct: 529 LQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVP 588
Query: 464 NKRFF 468
++ +
Sbjct: 589 DEPVY 593
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 91/224 (40%), Gaps = 7/224 (3%)
Query: 259 NGVMDAYGKNGMIKEMESVLSRM-------KSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
N MD Y N ++K+++ + + D T+ ++ G+ + F + +
Sbjct: 342 NYSMDPYQANQVLKQLQDHTVALNFFYWLKRQPGFNHDGHTYTTMVGILGRAKQFGAINK 401
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+ ++ +P + T+N +I +YG+A A VF +M + P +TY +I ++
Sbjct: 402 LLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIHA 461
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ A E++ + G T + ++ G A LF G P+
Sbjct: 462 KAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLV 521
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
TY ++ KA + KL + M+ G P+K + +E
Sbjct: 522 TYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVL 565
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 167/365 (45%), Gaps = 10/365 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+LF+ L ++ L +F K I D S L+ + K G+ +A + + N
Sbjct: 310 ILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDY-TCSILLNGLCKDGKVSIAEEVLQSLVN 368
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
+G P +YN LI + T + L A F +MK KP+ +TYN L+ +A
Sbjct: 369 AGLVPTRVIYNTLINGYCQTGE----LEGAFSTFGQMKS-RHIKPDHITYNALINGLCKA 423
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ L E+ ++ + P + T+N ++DAYG+ G +++ VLS M+ N KP+++++
Sbjct: 424 ERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSY 483
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+++++ K + + + H P +N++I Y + +A + +KM +
Sbjct: 484 GSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKS 543
Query: 354 MKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+PS +TY +I G C+ +S A EI + LS + N ++ A C G
Sbjct: 544 NGISPSIVTYNLLIK--GLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNI 601
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
+A L + H G+ TY L A ++ L ++M QN +VP+
Sbjct: 602 DKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIM 661
Query: 472 LETFS 476
+E +S
Sbjct: 662 VEAYS 666
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 149/332 (44%), Gaps = 13/332 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +IA M + G+ A+ +F EM P+ YN +I H+ D
Sbjct: 203 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGF------- 255
Query: 208 QKMKGMERC---KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
+++ C KPN +TYN+LL +A + + +AL E+ + PD +TY+ + D
Sbjct: 256 -RLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDG 314
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+NG K M S+ + N T ++L++ K E+V +SL+++ PT
Sbjct: 315 LSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPT 374
Query: 325 LPTFNSMIINYGK-ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+N++I Y + L+G A F +M + P ITY +I + ++ A+++
Sbjct: 375 RVIYNTLINGYCQTGELEG-AFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLL 433
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
E+ G + V T N +++AY G + ++ G+ P+ +Y + A+ K
Sbjct: 434 MEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKN 493
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+L M ++PN + + ++ +
Sbjct: 494 GKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 525
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 164/371 (44%), Gaps = 9/371 (2%)
Query: 91 SDKEPLVRTLNKYVK---VVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI 147
D + ++ KY+K + C +L L K K EV + + + I
Sbjct: 319 GDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNA-GLVPTRVI 377
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + G+ A F +M++ +PD YNALI KA+ + A
Sbjct: 378 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLC----KAERITNAQDLL 433
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M+ P + T+N L+ A + +++ + E+ E+ L P++ +Y +++A+ K
Sbjct: 434 MEMQD-NGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCK 492
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
NG I E ++L M P+ +N +ID+Y + D+ + + + + P++ T
Sbjct: 493 NGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVT 552
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N +I +AE + ++ + P ++Y +I+ Y N+ +A ++ +
Sbjct: 553 YNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMH 612
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
K G V T + ++ G E + L++ V P ++ + ++ +AY+K +
Sbjct: 613 KYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEI 672
Query: 448 LVQKLLKRMEQ 458
+ L K M Q
Sbjct: 673 KAEDLRKEMLQ 683
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 134/326 (41%), Gaps = 17/326 (5%)
Query: 156 GKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER 215
G+ R A F + ++G RPD +N + A + D L +A+G ++M
Sbjct: 143 GRHADVRRA---FGILASAGARPDTFAWNKAVQACVAAGD----LGEAVGMLRRMGRDGA 195
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
PN +YN+++ +A +F E+ E + P+ TYN ++D + K G ++
Sbjct: 196 PPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGF 255
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
+ +M + KP+ IT+N+L+ + + + + K P F I+
Sbjct: 256 RLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPD--GFTYSILFD 313
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFIT---YECIITMYGYCDN--VSRAREIFDELSKLG 390
G +R G ++ + KY + +T Y C I + G C + VS A E+ L G
Sbjct: 314 GLSR-NGDSKAMLSLFG--KYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAG 370
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
N ++ YC G A F + + PD TY L KA Q
Sbjct: 371 LVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQ 430
Query: 451 KLLKRMEQNGIVPNKRFFLEALETFS 476
LL M+ NG+ P F ++ +
Sbjct: 431 DLLMEMQDNGVNPTVETFNTLIDAYG 456
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 100/236 (42%), Gaps = 31/236 (13%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + G++ + +C V MQ+ + Y ++ K G+ A+ + +M +
Sbjct: 451 LIDAYGRTGQLEKCFIVLSEMQENGLK-PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK 509
Query: 175 GCRPDPSVYNALITAHLH--TRDKAKALAKAL----------GYFQKMKGM--------- 213
P+ VYNA+I A++ D+A L + + Y +KG+
Sbjct: 510 DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 569
Query: 214 ---------ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
R P+ V+YN L+ AC N+D+ L + +H+ + + TY+ ++
Sbjct: 570 EEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISG 629
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
G G + EME + +M N P N+++++Y K K E + K ++ +
Sbjct: 630 LGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 685
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 177/412 (42%), Gaps = 47/412 (11%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM 171
C L L K +K V++ M K+R + + ++ I + + G+ A +M
Sbjct: 168 CNPLLSALVKENKIGDVEYVYKEMIKRRIH-TNLNTFNIFINGLCRAGKLNKAEDAIEDM 226
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
+ G P+ YN L+ + R A + KA + ++M + C PN VT+N L+
Sbjct: 227 KAWGISPNVVTYNTLVDGYCK-RGSAGKMYKAEAFMKEMLANKIC-PNEVTFNTLIDGFC 284
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ NV F+E+ + L P+I TYN +++ NG ++E + +M KP+I+
Sbjct: 285 KDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIV 344
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
T+N LI+ + K++ + +VF + + P + TFN+MI Y K + + + M
Sbjct: 345 TYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSM 404
Query: 352 TAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
P+ TY C+I G C ++ A+E+ +E+ G V T N +++ C N
Sbjct: 405 LDEGILPNVSTYNCLIA--GLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKND 462
Query: 410 LPTEADLLFENSHNMGVTPDS-----------------------------------STYK 434
A+ L N+G+ P+ TY
Sbjct: 463 KSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYN 522
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF----LEALET-FSSSLAG 481
+L K Y K N E LL M + G+ PN+ + LE LE FS + G
Sbjct: 523 VLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKGFSPDIEG 574
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 173/380 (45%), Gaps = 46/380 (12%)
Query: 129 LEVFRWMQKQR-------------WYIADTGIYSKLIAVMGK--KGQTRLAMWLFSEMRN 173
L F+W QK+ ++A++ YSK+ + + K + +F +
Sbjct: 62 LRFFKWSQKEYRLSYGLEPTSKVLHFLANSKRYSKVRSFLDSFVKNEKHTVSSVFHSLLL 121
Query: 174 SGCRPDPS--VYNALITAH-----LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
G RP + + + L+ A+ LH +A AK G+ K ++ + N L
Sbjct: 122 DGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGF----------KLSLTSCNPL 171
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
L A + + V ++KE+ + + ++ T+N ++ + G + + E + MK+
Sbjct: 172 LSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGI 231
Query: 287 KPDIITFNLLIDSYGKRQAFDKM---EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
P+++T+N L+D Y KR + KM E K ++ +K P TFN++I + K
Sbjct: 232 SPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAA 291
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAM 401
A+ F++M P+ +TY +I G C+N + A +++D++ LG + T NA+
Sbjct: 292 AKKAFEEMQKQGLKPNIVTYNSLIN--GLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNAL 349
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ +C + EA +F++ + P+ T+ + AY K M E L M GI
Sbjct: 350 INGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGI 409
Query: 462 VPNKRFFLEALETFSSSLAG 481
+PN + T++ +AG
Sbjct: 410 LPN-------VSTYNCLIAG 422
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 5/141 (3%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
D Y+ LI + K ++R A L +EM N G +P+ YN L+ + K KA
Sbjct: 446 GDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYC-MEGKLKA--- 501
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
AL +M+ ER +PN+VTYN+L++ + ++ N L E+ E L P+ TY+ V
Sbjct: 502 ALNVRTRMEK-ERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVR 560
Query: 263 DAYGKNGMIKEMESVLSRMKS 283
+ G ++E L + S
Sbjct: 561 LEMLEKGFSPDIEGHLYNISS 581
>gi|224133318|ref|XP_002321537.1| predicted protein [Populus trichocarpa]
gi|222868533|gb|EEF05664.1| predicted protein [Populus trichocarpa]
Length = 834
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/447 (22%), Positives = 207/447 (46%), Gaps = 44/447 (9%)
Query: 12 RLSTLSSSSASSSSSSSSSSFNQSSSQNYNFTHRHIPLSLRTRPRTGICCVWTRPRSKRG 71
++S++++ S+ S S S +F++ R IP L+ +P
Sbjct: 214 QVSSIAADSSLDSHSLPSDAFDK---------RRTIPQRLKAQPNR-------------- 250
Query: 72 RKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVR----------SEHCFLLFEELGK 121
R S + + +V R F +V +++ ++ +R + +C + + +
Sbjct: 251 RPSRDTKMPAVVARSARQFVSTGHVVENVSQILRQLRWGPSAEEALVNLNCHMDAYQANQ 310
Query: 122 SDKWLQ----CLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
K LQ L F W+++ + D Y+ ++ ++G+ Q L +M GC+
Sbjct: 311 VLKQLQDHTVALGFFHWLKQLPGFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQ 370
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
P YN LI H+ +A L A+ F +M+ C+P+ VTY L+ A+A ++
Sbjct: 371 PTVVTYNRLI----HSYGRANYLNDAVEVFNQMQ-KAGCEPDRVTYCTLIDIHAKAGFLN 425
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+++ + + L+PD +TY+ +++ GK G + + + M C P+++T+N++I
Sbjct: 426 FAMEMYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMI 485
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
K + + ++++ + ++ +P T++ ++ G + +AE +F +M +
Sbjct: 486 ALQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWV 545
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC-MNGLPTEADL 416
P Y ++ ++G NV +A E + + G V T N++L A+ +N LP +L
Sbjct: 546 PDEPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPTCNSLLSAFLRVNRLPDAYNL 605
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKA 443
L ++ N+G+ P TY LL T+A
Sbjct: 606 L-QSMLNLGLNPSLQTYTLLLSCCTEA 631
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 131/296 (44%), Gaps = 8/296 (2%)
Query: 177 RPDPSVYNALITAHLHTRD-KAKALAK-------ALGYFQKMKGMERCKPNIVTYNILLR 228
R PS AL+ + H +A + K ALG+F +K + K + TY ++
Sbjct: 287 RWGPSAEEALVNLNCHMDAYQANQVLKQLQDHTVALGFFHWLKQLPGFKHDGYTYTTMVG 346
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
+A+ +N L ++ P + TYN ++ +YG+ + + V ++M+ C+P
Sbjct: 347 ILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDAVEVFNQMQKAGCEP 406
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
D +T+ LID + K + ++++ + + P T++ MI GKA A+ +F
Sbjct: 407 DRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLF 466
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
+M P+ +TY +I + N A +++ ++ G + T + ++E +
Sbjct: 467 CEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHS 526
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G EA+ +F PD Y LL + KA E + + M G+ PN
Sbjct: 527 GYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPN 582
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 108/245 (44%), Gaps = 14/245 (5%)
Query: 238 QVNALFKELHESILA--------------PDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
Q N + K+L + +A D YTY ++ G+ + +L +M
Sbjct: 307 QANQVLKQLQDHTVALGFFHWLKQLPGFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVR 366
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+ C+P ++T+N LI SYG+ + +VF + + +P T+ ++I + KA
Sbjct: 367 DGCQPTVVTYNRLIHSYGRANYLNDAVEVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNF 426
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A ++Q+M A +P TY +I G +++ A ++F E+ + G + T N M+
Sbjct: 427 AMEMYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIA 486
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
A L+ + N G PD TY ++ + + + + + M++ VP
Sbjct: 487 LQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVP 546
Query: 464 NKRFF 468
++ +
Sbjct: 547 DEPVY 551
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 136/302 (45%), Gaps = 18/302 (5%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT YS +I +GK G A LF EM GC P+ YN +I + KA+ A
Sbjct: 442 DTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIA----LQAKARNYQNA 497
Query: 204 LGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
L ++ M+ G E P+ VTY+I++ + +D+ A+F E+ PD Y +
Sbjct: 498 LKLYRDMQNAGFE---PDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLL 554
Query: 262 MDAYGKNGMI-KEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
+D +GK G + K E + + + C P++ T N L+ ++ + + +S+++
Sbjct: 555 VDLWGKAGNVEKAWEWYQAMLHAGLC-PNVPTCNSLLSAFLRVNRLPDAYNLLQSMLNLG 613
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV-SRA 379
P+L T+ ++ +AR + M+ + P+ + + + NV
Sbjct: 614 LNPSLQTYTLLLSCCTEARSPYDMGCYCELMSVTGH-PAHMFLSSLPSAGPDGQNVRHHV 672
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD-----SSTYK 434
+ D + ++ K ++A+++ +GL EA ++E + V PD SS Y
Sbjct: 673 SKFLDMMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEIAAQRNVYPDAVKEKSSCYW 732
Query: 435 LL 436
L+
Sbjct: 733 LI 734
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 107/251 (42%), Gaps = 8/251 (3%)
Query: 236 VDQVNALFKELHESILAPD-IYTYNGVMDAYGKNGMIKEMESVLSRM-------KSNQCK 287
V+ V+ + ++L A + + N MDAY N ++K+++ + + K
Sbjct: 276 VENVSQILRQLRWGPSAEEALVNLNCHMDAYQANQVLKQLQDHTVALGFFHWLKQLPGFK 335
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
D T+ ++ G+ + F + ++ ++ +PT+ T+N +I +YG+A A V
Sbjct: 336 HDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDAVEV 395
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F +M P +TY +I ++ ++ A E++ + G T + M+
Sbjct: 396 FNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINCLGK 455
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
G AD LF G P+ TY ++ KA + KL + M+ G P+K
Sbjct: 456 AGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGFEPDKVT 515
Query: 468 FLEALETFSSS 478
+ +E S
Sbjct: 516 YSIVMEVLGHS 526
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/480 (24%), Positives = 198/480 (41%), Gaps = 52/480 (10%)
Query: 17 SSSSASSSSSSSSSSFNQSSSQNYNFTHRHIPLSLRTRPRTGICCVWT----RPRSKRGR 72
S+ A SSS+S+ F+ SQ + ICC+ T R RS GR
Sbjct: 9 SAVMAISSSASTLLGFHSQRSQT---------------EKGMICCLHTSTISRSRSGSGR 53
Query: 73 ----KSEELESKELVRVLMRSFSDKEPL---------------------VRTLNKYVKVV 107
K L + E K PL V +L+K ++++
Sbjct: 54 QKYQKGCSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELL 113
Query: 108 RSEHCFLLFEELGKSDKWLQCLE-VFRWMQK--QRWYIADTGIYSKLIAVMGKKGQTRLA 164
R E F L LQ ++ F + K + + D +S LI + + + A
Sbjct: 114 RIERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARA 173
Query: 165 MWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYN 224
M F EM SG +P+ YN +I K A+G +KM +P+IV YN
Sbjct: 174 MEFFDEMVASGYQPNLHTYNTIIKGFC----KIGKTTVAVGLLKKMDKAGG-RPDIVIYN 228
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
++ + R V + +F E+ + PD++TY+ +M + +E ++ + M S
Sbjct: 229 TIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSL 288
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
PD++TFN+L+D K + + + K ++ +P T+NS++ Y +A
Sbjct: 289 NIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEA 348
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
VF M P+ ++Y +I Y + ARE+FDE+S G N ++
Sbjct: 349 RMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISG 408
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
C G EA LF++ G +PD T +L + K + +L + M+ + + PN
Sbjct: 409 LCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPN 468
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 159/330 (48%), Gaps = 6/330 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L DK+ + +E F M Y + Y+ +I K G+T +A+ L +M +
Sbjct: 160 LINGLCFEDKFARAMEFFDEMVAS-GYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKA 218
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G RPD +YN +I K + +++AL F ++KG + +P++ TY+IL+ +
Sbjct: 219 GGRPDIVIYNTIIDGLC----KDRLVSEALDIFSEIKG-KGVRPDVFTYSILMHGLCNSD 273
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
++ +ALF E+ + PD+ T+N ++D K GM+ E + ++ M +P+ T+N
Sbjct: 274 QKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYN 333
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
L++ Y + + VF +++ P + ++N +I Y KA+ +A +F +M+
Sbjct: 334 SLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFR 393
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P+ Y +I+ ARE+F ++ G + T +L++ C G A
Sbjct: 394 GLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNA 453
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
LF + + P+ TY +L +A K+
Sbjct: 454 LRLFRAMQDSCLKPNLVTYDILIRAMYKSG 483
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI K + A LF EM G P+ YN LI+ +A +A F
Sbjct: 367 YNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLC----QAGRHCEARELF 422
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ M+ + C P++VT ILL + + +D LF+ + +S L P++ TY+ ++ A K
Sbjct: 423 KDMQA-QGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYK 481
Query: 268 NGMI 271
+G I
Sbjct: 482 SGKI 485
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/177 (18%), Positives = 68/177 (38%), Gaps = 13/177 (7%)
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGY 372
F ++H P + F+ ++ + + G + +++ ++ + +I +
Sbjct: 72 FNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSR 131
Query: 373 CDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
V A + ++ KLG + T ++++ C A F+ G P+ T
Sbjct: 132 LQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHT 191
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPN-------------KRFFLEALETFS 476
Y + K + K + LLK+M++ G P+ R EAL+ FS
Sbjct: 192 YNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFS 248
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 146/319 (45%), Gaps = 5/319 (1%)
Query: 146 GIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALG 205
G++ L +V+ + G A F M P NA LH KA +
Sbjct: 63 GVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAF----LHRLSKAGEGDLSRD 118
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+F+ M G P + TYNI++ + ++ +LF+++ + L PDI TYN ++D Y
Sbjct: 119 FFRDMVG-AGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGY 177
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
GK G++ E + MK C+PD+IT+N LI+S+ K + + + F+ + KP +
Sbjct: 178 GKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNV 237
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
+++++I K + A F MT + P+ TY +I N+ A + DE
Sbjct: 238 ISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADE 297
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ + D+ + T +L+ C G+ EA+ LF GVTP+ Y L + K
Sbjct: 298 MLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRS 357
Query: 446 KELVQKLLKRMEQNGIVPN 464
+ +L M + I P+
Sbjct: 358 MDKAMELFNEMREKDIKPD 376
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 154/357 (43%), Gaps = 40/357 (11%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI GK G ++ LF EM+ GC PD YNALI + K K + +A
Sbjct: 166 DIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFC----KFKGMLRA 221
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+F++MK + KPN+++Y+ L+ A + + F ++ L P+ +TY+ ++D
Sbjct: 222 FEFFREMKDKD-LKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLID 280
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
A K G + E + M +I+T+ L+D + ++ E++F+++ + P
Sbjct: 281 ANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTP 340
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY--------------ECIITM 369
L + ++I + K R KA +F +M P + + EC I M
Sbjct: 341 NLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIM 400
Query: 370 ---------------------YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
Y N + A + +E+ LG ++ V T A+++ C
Sbjct: 401 TEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKR 460
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
GL EA F + + P+ + Y L K N +KL M+ ++P+K
Sbjct: 461 GLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDK 517
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 139/325 (42%), Gaps = 13/325 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + ++G A LF M +G P+ Y ALI H+ K +++ KA+ F
Sbjct: 310 YTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHI----KVRSMDKAMELF 365
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M+ + KP+I+ + ++ +++ + E+ ES + + Y +MDAY K
Sbjct: 366 NEMREKD-IKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFK 424
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G E ++L M+ + ++TF LID KR + F + +P +
Sbjct: 425 AGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAV 484
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ ++I K G A+ +F +M P I Y +I N A + +++
Sbjct: 485 YTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMM 544
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS-TYKLLYKAYTKANM- 445
++G ++ + +++ G +A G+ PD + +LL K Y N+
Sbjct: 545 EMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNID 604
Query: 446 ------KELVQKLLKRMEQNGIVPN 464
ELV+K L N VPN
Sbjct: 605 EAIELQNELVEKGLIHGNSNPAVPN 629
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 153/374 (40%), Gaps = 39/374 (10%)
Query: 126 LQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
L+ E FR M K + + YS LI + K+G ++A+ F +M G P+ Y++
Sbjct: 219 LRAFEFFREM-KDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSS 277
Query: 186 LITAHLHTRDKAKALAKALGYFQ------------------------------KMKGMER 215
LI A+ + +A A Q + G
Sbjct: 278 LIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAG 337
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
PN+ Y L+ + R++D+ LF E+ E + PDI + ++ ++E +
Sbjct: 338 VTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECK 397
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
+++ MK + + + + L+D+Y K + + + + + T+ TF ++I
Sbjct: 398 IIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGL 457
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDM 393
K L +A Y F +M P+ Y +I G C N + A+++FDE+ K+M
Sbjct: 458 CKRGLVQEAIYYFGRMPDHDLQPNVAVYTALID--GLCKNNCIGDAKKLFDEMQD--KNM 513
Query: 394 KVSTL--NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
+ AM++ +G EA + MG+ D Y L ++ + +K
Sbjct: 514 IPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARK 573
Query: 452 LLKRMEQNGIVPNK 465
L M GI+P++
Sbjct: 574 FLAEMIGKGIIPDE 587
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 105/262 (40%), Gaps = 18/262 (6%)
Query: 222 TYNILLRACAQARNVDQVNALFKELHES------------------ILAPDIYTYNGVMD 263
+Y IL+ AR N + KEL S + P ++ +
Sbjct: 11 SYCILVHILFYARMYFHANNILKELVLSSWVLPGSDVFEILWTTRNVCVPGFGVFDALFS 70
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ GM++ RM + P + N + K D F+ ++ + P
Sbjct: 71 VLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAP 130
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T+ T+N MI + K A +F++M M TP +TY +I YG + + +F
Sbjct: 131 TVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLF 190
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+E+ +G + V T NA++ ++C A F + + P+ +Y L A K
Sbjct: 191 EEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKE 250
Query: 444 NMKELVQKLLKRMEQNGIVPNK 465
M ++ K M + G++PN+
Sbjct: 251 GMMQMAIKFFVDMTRVGLLPNE 272
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 153/347 (44%), Gaps = 9/347 (2%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
E+G DK + L M + +Y+ LI K G LF +M
Sbjct: 176 EVGYLDKGFEVLGQMEEMGLS----PNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVV 231
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
+ Y LI K + ++KMK + PN+ TYN ++ C ++
Sbjct: 232 ANQYTYTVLINGFFKMGLKKDGIE----LYEKMK-LTGIVPNVYTYNSMICRCCNDGKLN 286
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
LF E+ E +A ++ TYN ++ + + E E ++ RMK + P++I++N LI
Sbjct: 287 NAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLI 346
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
D Y DK +F + S + P+L T+N +I + +A+ + ++M A +
Sbjct: 347 DGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLS 406
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
PS +TY ++ DN+ +A +I+ + K G + ++ C+ G EA L
Sbjct: 407 PSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKL 466
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
F++ M + P+ Y + Y K +LLK M +NG+VPN
Sbjct: 467 FKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPN 513
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 141/307 (45%), Gaps = 16/307 (5%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A++ F++M G P + +N L+ + K+ KA F + KG K ++ ++
Sbjct: 114 ALFYFNQMIGRGLVPGSNTFNNLLILLI----KSNFFEKAWRVFNETKG--NVKLDVYSF 167
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
I+++ C + +D+ + ++ E L+P++ Y ++D KNG I+ + + +M
Sbjct: 168 GIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGE 227
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII---NYGKARL 340
+ T+ +LI+ + K ++++ + + P + T+NSMI N GK
Sbjct: 228 LDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLN- 286
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTL 398
A +F +M + +TY +I G C V A + + + G + +
Sbjct: 287 --NAFELFDEMRERGVACNVVTYNTLIG--GLCQERRVLEAERLMCRMKRDGLSPNLISY 342
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N +++ YC G +A LF + G +P +TY +L +++A V +++ ME
Sbjct: 343 NTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEA 402
Query: 459 NGIVPNK 465
G+ P+K
Sbjct: 403 RGLSPSK 409
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 135/315 (42%), Gaps = 49/315 (15%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
E+F M ++R + Y+ LI + ++ + A L M+ G P+ YN LI
Sbjct: 289 FELFDEM-RERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLID 347
Query: 189 AH--LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
+ + DKA +L F +MK + P++ TYNIL+ ++A+N V + +E+
Sbjct: 348 GYCSIGNLDKASSL------FNQMKSSGQ-SPSLATYNILIAGFSEAKNSAGVTDMVREM 400
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
L+P TY +MDA ++ I++ + S M+ DI + +LI
Sbjct: 401 EARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDM 460
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ ++FKSL KP +N+MI
Sbjct: 461 KEASKLFKSLDEMHLKPNDVIYNTMI---------------------------------- 486
Query: 367 ITMYGYCDNVS--RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
YGYC S RA + E+ + G V++ N+ ++ C + TEA++L ++ +
Sbjct: 487 ---YGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIEL 543
Query: 425 GVTPDSSTYKLLYKA 439
G+ P S + ++ KA
Sbjct: 544 GLKPSISIWNMISKA 558
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 146/335 (43%), Gaps = 19/335 (5%)
Query: 167 LFSEMRNSGCRPDPS---VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
LF E+ P+ ++ A+I AH+ +++ +AL YF +M G P T+
Sbjct: 79 LFHELTQPHLDSFPTHVLIHEAIINAHV----RSQLPEQALFYFNQMIG-RGLVPGSNTF 133
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
N LL ++ ++ +F E ++ D+Y++ ++ + G + + VL +M+
Sbjct: 134 NNLLILLIKSNFFEKAWRVFNETKGNV-KLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEE 192
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
P+++ + LID K ++ +Q+F + T+ +I + K L+
Sbjct: 193 MGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKD 252
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
+++KM P+ TY +I ++ A E+FDE+ + G V T N ++
Sbjct: 253 GIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIG 312
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
C EA+ L G++P+ +Y L Y + L +M+ +G P
Sbjct: 313 GLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSP 372
Query: 464 NKRFFLEALETFSSSLAG---SQSGSAKTDLTRSL 495
+L T++ +AG +++ + TD+ R +
Sbjct: 373 -------SLATYNILIAGFSEAKNSAGVTDMVREM 400
>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
Length = 467
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 144/310 (46%), Gaps = 9/310 (2%)
Query: 157 KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK--GME 214
K G A +F EM G P+ Y AL+ + + K A F++M+ G+E
Sbjct: 50 KGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFA----LFEEMRRGGVE 105
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
PN+ TYN L+ + ++ +LF E+ + ++ +YN ++ ++G + +
Sbjct: 106 ---PNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDA 162
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
+L M++ +P IITFNLL+D YGK F + + +P+ T+N +I
Sbjct: 163 AKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAG 222
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
+ +AR +A M P+ +TY +I + +++ +A EI + K G ++
Sbjct: 223 FCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVD 282
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
T ++ A CM G +A LF++ GV P + Y ++ Y + KL+
Sbjct: 283 AHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIM 342
Query: 455 RMEQNGIVPN 464
M Q G++PN
Sbjct: 343 EMRQKGLIPN 352
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 111/242 (45%), Gaps = 5/242 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LIA + + G+ A L MR G RP +N L+ + KA ++ AL +F
Sbjct: 146 YNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGY----GKAGKMSNALPFF 201
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+MK +P+ VTYN+L+ +AR++ + N ++ E L P TY ++D++ +
Sbjct: 202 NQMKAAG-FQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFAR 260
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ + +L+ M+ + D T+ +L+ + ++F+S+ +P+
Sbjct: 261 ENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVI 320
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
++ MI YG+ KA + +M P+ +Y I + D A + D++
Sbjct: 321 YDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDME 380
Query: 388 KL 389
+
Sbjct: 381 TI 382
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/258 (18%), Positives = 101/258 (39%), Gaps = 35/258 (13%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
++ L+ C + +V + +F E+ LAP+ TY +M Y +G ++ ++
Sbjct: 37 DVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALF 96
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
M+ +P++ T+N LI + + F++ +F + + ++N++I +
Sbjct: 97 EEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRH 156
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
A + M PS IT+ ++ YG +S A F++ MK +
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQ-------MKAA-- 207
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
G P + TY +L + +A + L M++
Sbjct: 208 --------------------------GFQPSAVTYNMLIAGFCRARDMTRANRALSDMKE 241
Query: 459 NGIVPNKRFFLEALETFS 476
G+ P K + +++F+
Sbjct: 242 RGLEPTKVTYTILIDSFA 259
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 91/232 (39%), Gaps = 8/232 (3%)
Query: 269 GMIKEMESVLSR-MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G ++ ++L+R KS D+ L++ K + +VF + P T
Sbjct: 16 GDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVT 75
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ +++ Y + K +F++M P+ TY C+I + RAR +FDE+
Sbjct: 76 YTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMP 135
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G V + N ++ C +G +A L + G P T+ LL Y KA
Sbjct: 136 VRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMS 195
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTRSLSTAK 499
+M+ G P+ T++ +AG T R+LS K
Sbjct: 196 NALPFFNQMKAAGFQPSAV-------TYNMLIAGFCRARDMTRANRALSDMK 240
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 162/327 (49%), Gaps = 15/327 (4%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR---DKAKA 199
A+ IYS +I + K A+ LF+EM N G RP+ Y++LI+ + D ++
Sbjct: 258 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRL 317
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L+ + + PN+VT+N L+ A + + + L+ E+ + + PDI+TY+
Sbjct: 318 LSDMIE--------RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 369
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
+++ + + + E + + M S C P+++T+N LI+ + K + D+ ++F+ +
Sbjct: 370 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR 429
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VS 377
T+ ++I + +AR A+ VF++M + P+ +TY ++ G C N +
Sbjct: 430 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD--GLCKNGKLE 487
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
+A +F+ L + + + T N M+E C G + LF + GV PD Y +
Sbjct: 488 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPN 464
+ + +KE L ++M ++G +P+
Sbjct: 548 SGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 143/304 (47%), Gaps = 11/304 (3%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVT 222
A+ L +M G RPD + LI L +KA ++A+ +M ++R C+PN+VT
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHG-LFLHNKA---SEAVALVDRM--VQRGCQPNLVT 227
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y +++ + ++D L ++ + + ++ Y+ V+D+ K + ++ + M+
Sbjct: 228 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
+ +P++IT++ LI + + ++ ++ K P + TFN++I + K
Sbjct: 288 NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLV 347
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM--KVSTLNA 400
+AE ++ +M P TY +I + D + A+ +F+ + + KD V T N
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM--ISKDCFPNVVTYNT 405
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
++ +C E LF G+ ++ TY L + +A + Q + K+M +G
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Query: 461 IVPN 464
+ PN
Sbjct: 466 VHPN 469
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 142/323 (43%), Gaps = 5/323 (1%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
Y DT ++ LI + + A+ L M GC+P+ Y ++ D +
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD----I 241
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
A KM+ + + N+V Y+ ++ + + R+ D LF E+ + P++ TY+
Sbjct: 242 DLAFNLLNKMEA-AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 300
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ + +LS M + P+++TFN LID++ K + E+++ ++
Sbjct: 301 LISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS 360
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P + T++S+I + +A+++F+ M + P+ +TY +I + +
Sbjct: 361 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
E+F E+S+ G T ++ + A ++F+ + GV P+ TY L
Sbjct: 421 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 480
Query: 441 TKANMKELVQKLLKRMEQNGIVP 463
K E + + ++++ + P
Sbjct: 481 CKNGKLEKAMVVFEYLQRSKMEP 503
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 149/363 (41%), Gaps = 40/363 (11%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++KL++ + K + L + L +M+ G + YN LI + ALA LG
Sbjct: 88 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA-LLGKM 146
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K+ G E P+IVT + LL + + AL ++ E PD T+ ++
Sbjct: 147 MKL-GYE---PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD-------KME---------- 310
+ E +++ RM C+P+++T+ ++++ KR D KME
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 311 ------------------QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+F + + +P + T++S+I A + M
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
K P+ +T+ +I + + A +++DE+ K D + T ++++ +CM+
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
EA +FE + P+ TY L + KA + +L + M Q G+V N + +
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 473 ETF 475
F
Sbjct: 443 HGF 445
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 118/278 (42%), Gaps = 5/278 (1%)
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L A+G F M R P+I +N LL A A+ + D V +L +++ ++ ++YTYN
Sbjct: 66 LDDAIGLFGGMVK-SRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
+++ + + I ++L +M +P I+T + L++ Y + + ++
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVS 377
+P TF ++I +A + +M P+ +TY ++ G C ++
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN--GLCKRGDID 242
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
A + +++ + V + ++++ C +A LF N GV P+ TY L
Sbjct: 243 LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 302
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+LL M + I PN F ++ F
Sbjct: 303 SCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAF 340
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 153/312 (49%), Gaps = 13/312 (4%)
Query: 156 GKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGM 213
G K Q + +W + N G + + NALI H + K + +A Q M KG+
Sbjct: 445 GGKHQEAVGIWF--KTLNKGLGVNLATSNALI----HGLCEGKYMKEATKVIQTMLNKGI 498
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
E + +TYNI++R C + +++ L ++ PD++T+N ++ AY G ++E
Sbjct: 499 EL---DSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEE 555
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
+L +MK+ +PDI+++ +ID + K + K ++ LM KP + +N++I
Sbjct: 556 TFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIG 615
Query: 334 NYGK-ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKD 392
YG+ + G + V + M + P+ +TY ++ + V A+ IF + + D
Sbjct: 616 GYGRNGDISGAIDAV-ETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVD 674
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
+ V M++ YC G EA FE + G++P+ TY L AY+K+ E KL
Sbjct: 675 LGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKL 734
Query: 453 LKRMEQNGIVPN 464
M +G++P+
Sbjct: 735 FDEMVGSGVIPD 746
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 103/235 (43%), Gaps = 4/235 (1%)
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
F + + G P NA + A + +A L A F +M+ N +Y ++
Sbjct: 173 FRVLSSRGAPPSIKTCNAFLEALV----RAGQLDAAREVFDEMRESRNVALNEYSYTAMI 228
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
+A +A VD + EL + L P + TYN +MDA K+G ++E + RM+
Sbjct: 229 KALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMT 288
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P ++TF +LI+ + + F ++ V + + P +N +I + + +A +
Sbjct: 289 PSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRL 348
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
F +M K P+ +TY I + RA I +++ +G + N ++
Sbjct: 349 FDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVV 403
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 6/251 (2%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESI-LAPDIYTYNGVMDAYGKNGMIKEMES 276
P+I T N L A +A +D +F E+ ES +A + Y+Y ++ A K G +
Sbjct: 183 PSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFE 242
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+L+ + +P ++T+N+L+D+ K ++ ++ + P++ TF +I
Sbjct: 243 MLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLA 302
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
+ G+ V Q+M + +P+ + Y +I + + S+A +FDE+ + K MK +
Sbjct: 303 RGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEM--VLKKMKPT 360
Query: 397 --TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK-ELVQKLL 453
T N + +A C G A+ + E+ ++G+T + + + + E V +
Sbjct: 361 AVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSIT 420
Query: 454 KRMEQNGIVPN 464
M G+ PN
Sbjct: 421 NEMVTRGMRPN 431
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 152/383 (39%), Gaps = 40/383 (10%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L L + +++ + V + M+ Q + IY++LI +KG A+ LF EM
Sbjct: 296 ILINGLARGERFGEVGIVLQEME-QLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVL 354
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKA-----------LAKALGYF--------QKMKGME 214
+P YN + A + +A + G F Q+ + +E
Sbjct: 355 KKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLE 414
Query: 215 RC------------KPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+PN +R C ++ + V FK L++ L ++ T N +
Sbjct: 415 SVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKG-LGVNLATSNAL 473
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ + +KE V+ M + + D IT+N++I K ++ ++ +
Sbjct: 474 IHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGF 533
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECIITMYGYCDNVSR 378
KP L TFN+++ Y GK E F + MK P ++Y II + ++ +
Sbjct: 534 KPDLFTFNTLLHAYCNL---GKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRK 590
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A+E EL G V NA++ Y NG + A E + G+ P + TY L
Sbjct: 591 AKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMY 650
Query: 439 AYTKANMKELVQKLLKRMEQNGI 461
A + E + + + +N +
Sbjct: 651 WMCHAGLVEEAKTIFSQARENNV 673
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 7/163 (4%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
IY+ LI G+ G A+ M+++G +P Y +L+ H A + +A
Sbjct: 609 IYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCH----AGLVEEAKTI 664
Query: 207 FQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
F + + ++ Y I+++ C + V+ V A F+E+ ++P+ TY +M AY
Sbjct: 665 FSQAR-ENNVDLGVIGYTIMIQGYCKLGKMVEAV-AYFEEMRSRGISPNKLTYTTLMYAY 722
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
K+G +E + M + PD IT+ LI + + DK
Sbjct: 723 SKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDK 765
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 1/161 (0%)
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP-SFITYECIITMYG 371
F+ L P++ T N+ + +A A VF +M + + +Y +I
Sbjct: 173 FRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALC 232
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
V E+ EL + G V T N +++A C +G EA L G+TP
Sbjct: 233 KAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVV 292
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
T+ +L + V +L+ MEQ G+ PN+ + E +
Sbjct: 293 TFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELI 333
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 18/154 (11%)
Query: 326 PTFNSMIINYGKARLQG---KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P+ + +I + + QG +A F+ +++ PS T + + ARE+
Sbjct: 148 PSSDFLIHTFITSPAQGSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREV 207
Query: 383 FDELSKLGKDMKVSTLN-----AMLEAYCMNGLPTEADLLFENSHNM---GVTPDSSTYK 434
FDE+ ++ + LN AM++A C G + D FE + G+ P TY
Sbjct: 208 FDEM----RESRNVALNEYSYTAMIKALCKAG---KVDAGFEMLAELWRAGLQPTVVTYN 260
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+L A K+ E +L RMEQ G+ P+ F
Sbjct: 261 VLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTF 294
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 7/118 (5%)
Query: 144 DTGIYSKLIAVMG--KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
D G+ I + G K G+ A+ F EMR+ G P+ Y L+ A+ K+
Sbjct: 674 DLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAY----SKSGNSE 729
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
+A F +M G P+ +TY L+ C++ ++D+ EL L D YN
Sbjct: 730 EASKLFDEMVG-SGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGALTKDDRMYN 786
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 158/350 (45%), Gaps = 6/350 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L KS + +EV+R M + + YS L+ +GK+ M L EM
Sbjct: 194 LIHLLLKSRFCTEAMEVYRRMILE-GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETL 252
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G +P+ VY I + R A + +A ++M E C P++VTY +L+ A AR
Sbjct: 253 GLKPN--VYTFTICIRVLGR--AGKINEAYEILKRMDD-EGCGPDVVTYTVLIDALCTAR 307
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+D +F+++ PD TY ++D + N + ++ S M+ + PD++TF
Sbjct: 308 KLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFT 367
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+L+D+ K F + + P L T+N++I + A +F M ++
Sbjct: 368 ILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESL 427
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P+ TY I YG + A E F+++ G + NA L + G EA
Sbjct: 428 GVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREA 487
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+F ++G+ PDS TY ++ K Y+K + KLL M +NG P+
Sbjct: 488 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 180/399 (45%), Gaps = 12/399 (3%)
Query: 72 RKSE--ELESKELVRVLMRSFSDKEP---LVRTLNKYVKVVRS-EHCFLLFEELGKSDKW 125
RKS +L S E V ++SF D + +++ + +V + E C + E L K
Sbjct: 75 RKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKL 134
Query: 126 LQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
+ VF MQK R DT Y + + KG + A + +MR G + YN
Sbjct: 135 EEMAYVFDLMQK-RIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNG 193
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
LI L K++ +A+ +++M +E +P++ TY+ L+ + R++D V L KE
Sbjct: 194 LIHLLL----KSRFCTEAMEVYRRMI-LEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKE 248
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ L P++YT+ + G+ G I E +L RM C PD++T+ +LID+ +
Sbjct: 249 METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 308
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
D ++VF+ + + KP T+ +++ + R + + +M + P +T+
Sbjct: 309 LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI 368
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
++ N A + D + G + T N ++ +A LF N ++G
Sbjct: 369 LVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
V P + TY + Y K+ + ++M+ GI PN
Sbjct: 429 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPN 467
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 153/326 (46%), Gaps = 42/326 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + + +A +F +++++GC PD + YN L+ A+ K+ + + +
Sbjct: 788 YNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAY----GKSGKIDELFELY 843
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL-HESILAPDIYTYNGVMDAYG 266
++M E C+ N +T+NI++ +A NVD L+ +L + +P TY ++D
Sbjct: 844 KEMSTHE-CEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K+G + E + + M C+P+ +N+LI+ +GK D +FK ++ +P L
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962
Query: 327 TFN----------------------------------SMIIN-YGKARLQGKAEYVFQKM 351
T++ ++IIN GK+ +A +F +M
Sbjct: 963 TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Query: 352 -TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
T+ TP TY +I G V A +I++E+ + G + V T NA++ Y ++G
Sbjct: 1023 KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1082
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLL 436
P A +++ G +P++ TY+ L
Sbjct: 1083 PEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 157/359 (43%), Gaps = 7/359 (1%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K+ + + + M+ Q + + Y+ LI + + + A+ LF M +
Sbjct: 368 ILVDALCKAGNFGEAFDTLDVMRDQ-GILPNLHTYNTLICGLLRVHRLDDALELFGNMES 426
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G +P Y I + + D AL F+KMK + PNIV N L + A+A
Sbjct: 427 LGVKPTAYTYIVFIDYYGKSGDSVSALET----FEKMK-TKGIAPNIVACNASLYSLAKA 481
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ +F L + L PD TYN +M Y K G I E +LS M N C+PD+I
Sbjct: 482 GRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVV 541
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N LI++ K D+ ++F + K KPT+ T+N+++ GK +A +F+ M
Sbjct: 542 NSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 601
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P+ IT+ + D V+ A ++ ++ +G V T N ++ NG E
Sbjct: 602 KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKE 661
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
A F + V PD T L KA++ E K++ N F E L
Sbjct: 662 AMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDL 719
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 169/402 (42%), Gaps = 66/402 (16%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAV------MGKKGQTRLAMWLFSEMRN 173
GKS + LE F M+ + GI ++A + K G+ R A +F +++
Sbjct: 444 GKSGDSVSALETFEKMKTK-------GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKD 496
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQ 232
G PD YN ++ + K + +A+ +M ME C+P+++ N L+ +
Sbjct: 497 IGLVPDSVTYNMMMKCY----SKVGEIDEAIKLLSEM--MENGCEPDVIVVNSLINTLYK 550
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
A VD+ +F + E L P + TYN ++ GKNG I+E + M C P+ IT
Sbjct: 551 ADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTIT 610
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
FN L D K ++ +M P + T+N++I K +A F +M
Sbjct: 611 FNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK 670
Query: 353 AMKYTPSFITYEC-----------------IITMYGYCDNVSRAREIFDE------LSKL 389
+ Y P F+T C IIT + Y + + +F E L++
Sbjct: 671 KLVY-PDFVTL-CTLLPGVVKASLIEDAYKIITNFLY-NCADQPANLFWEDLIGSILAEA 727
Query: 390 GKDMKVS----------------TLNAMLEAYCMNGLPTEADLLFEN-SHNMGVTPDSST 432
G D VS L ++ C + + A LFE + ++GV P T
Sbjct: 728 GIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPT 787
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK---RFFLEA 471
Y LL +A+M E+ Q + +++ G +P+ F L+A
Sbjct: 788 YNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDA 829
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 135/301 (44%), Gaps = 8/301 (2%)
Query: 168 FSE--MRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNI 225
FSE + N CR S+ +I K ++ A F+K +P + TYN+
Sbjct: 735 FSERLVANGICRDGDSILVPIIRYSC----KHNNVSGARTLFEKFTKDLGVQPKLPTYNL 790
Query: 226 LLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ 285
L+ +A ++ +F ++ + PD+ TYN ++DAYGK+G I E+ + M +++
Sbjct: 791 LIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHE 850
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-KPTLPTFNSMIINYGKARLQGKA 344
C+ + IT N++I K D ++ LM ++ PT T+ +I K+ +A
Sbjct: 851 CEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEA 910
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
+ +F+ M P+ Y +I +G A +F + K G + T + +++
Sbjct: 911 KQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDC 970
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN-GIVP 463
CM G E F+ G+ PD Y L+ K++ E L M+ + GI P
Sbjct: 971 LCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITP 1030
Query: 464 N 464
+
Sbjct: 1031 D 1031
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 131/335 (39%), Gaps = 6/335 (1%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
EVF M+ R + D Y L+ +SEM G PD + L+ A
Sbjct: 314 EVFEKMKTGR-HKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDA 372
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
KA +A M+ + PN+ TYN L+ + +D LF +
Sbjct: 373 LC----KAGNFGEAFDTLDVMRD-QGILPNLHTYNTLICGLLRVHRLDDALELFGNMESL 427
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+ P YTY +D YGK+G +MK+ P+I+ N + S K +
Sbjct: 428 GVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREA 487
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
+Q+F L P T+N M+ Y K +A + +M P I +I
Sbjct: 488 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINT 547
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
D V A ++F + ++ V T N +L NG EA LFE G P+
Sbjct: 548 LYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPN 607
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ T+ L+ K + L K+L +M G VP+
Sbjct: 608 TITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPD 642
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 168/397 (42%), Gaps = 62/397 (15%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L LGK+ K + +E+F M Q+ +T ++ L + K + LA+ + +M +
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMV-QKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDM 637
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC PD YN +I + K + +A+ +F +MK + P+ VT LL +A
Sbjct: 638 GCVPDVFTYNTIIFGLV----KNGQVKEAMCFFHQMKKL--VYPDFVTLCTLLPGVVKAS 691
Query: 235 NVDQV----------------NALFKELHESILAPDIYTYNGVMDAYG------KNGMIK 272
++ N +++L SILA G+ +A NG+ +
Sbjct: 692 LIEDAYKIITNFLYNCADQPANLFWEDLIGSILAE-----AGIDNAVSFSERLVANGICR 746
Query: 273 EMESVLSRMKSNQCK---------------------PDIITFNLLIDSYGKRQAFDKMEQ 311
+ +S+L + CK P + T+NLLI + + +
Sbjct: 747 DGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQD 806
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ---KMTAMKYTPSFITYECIIT 368
VF + + P + T+N ++ YGK+ GK + +F+ +M+ + + IT+ +I+
Sbjct: 807 VFLQVKSTGCIPDVATYNFLLDAYGKS---GKIDELFELYKEMSTHECEANTITHNIVIS 863
Query: 369 MYGYCDNVSRAREIF-DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
NV A +++ D +S T +++ +G EA LFE + G
Sbjct: 864 GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCR 923
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
P+ + Y +L + KA + L KRM + G+ P+
Sbjct: 924 PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPD 960
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 159/340 (46%), Gaps = 10/340 (2%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ LEV+R M + +S L+ GK+ + M L EM + G RP+ +Y
Sbjct: 212 EALEVYRRMVSEGLK-PSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPN--IYTYT 268
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMER--CKPNIVTYNILLRACAQARNVDQVNALFK 244
I + RD K ++ MK M+ C P++VTY +L+ A AR +D LF
Sbjct: 269 ICIRVLGRD-----GKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFT 323
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
++ S PD TY ++D + G + ++E + + M+++ PD++TF +L+++ K
Sbjct: 324 KMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAG 383
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
++ + ++ P L T+N++I +A A +F M ++ P+ TY
Sbjct: 384 RINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYI 443
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
+I +G + +A E F+++ G + NA L + G EA +F +
Sbjct: 444 LLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSS 503
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G+ PDS TY ++ K Y+K + KLL M + P+
Sbjct: 504 GLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPD 543
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 147/322 (45%), Gaps = 5/322 (1%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ LI + +A LF EM+++GC PD YN+LI AH K+ + +
Sbjct: 792 VYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAH----GKSGKINELFDL 847
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+ +M CKPN +TYN+++ ++ +D+ L+ L +P T+ ++D
Sbjct: 848 YDEML-TRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLL 906
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K+G + + + M C+P+ +N+L++ YGK D + FK ++ +P L
Sbjct: 907 KSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLK 966
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
++ ++ A A + F+K+ P + Y +I G A +F E+
Sbjct: 967 SYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEM 1026
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
G + T N+++ + G+ EA ++E +G+ P+ TY L + YT +
Sbjct: 1027 QNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNS 1086
Query: 447 ELVQKLLKRMEQNGIVPNKRFF 468
EL + K+M G PN F
Sbjct: 1087 ELAYGIYKKMMVGGCDPNTGTF 1108
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 154/334 (46%), Gaps = 6/334 (1%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VF MQ+Q + Y + + +G R A +MR +G + YN LI
Sbjct: 146 VFDLMQRQIIR-RNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLI--- 201
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
H ++ +AL +++M E KP++ T++ L+ A + RN+ V L +E+
Sbjct: 202 -HFLLQSGFCKEALEVYRRMVS-EGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMG 259
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
L P+IYTY + G++G I E ++ RM + C PD++T+ +LID+ + D
Sbjct: 260 LRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAM 319
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+F + S KP T+ +++ + K E ++ +M A Y P +T+ ++
Sbjct: 320 CLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNAL 379
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
++ A ++ D + K G + T N ++ +A LF N ++GV P +
Sbjct: 380 CKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTA 439
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
TY LL + K+ + ++M+ GI PN
Sbjct: 440 YTYILLIDYHGKSGHPGKALETFEKMKARGIAPN 473
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 123/269 (45%)
Query: 196 KAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
K K + A F K KP + YN+L+ + NV+ LF+E+ + APD
Sbjct: 766 KHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDT 825
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
+TYN ++DA+GK+G I E+ + M + CKP+ IT+N++I + K DK ++ +
Sbjct: 826 FTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYN 885
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
L+ PT TF +I K+ A +F M P+ Y ++ YG +
Sbjct: 886 LVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGH 945
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
V A E F + K G + + +++ C+ G +A FE G+ PD Y L
Sbjct: 946 VDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNL 1005
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ ++ E L M+ GIVP+
Sbjct: 1006 MINGLGRSQRTEEALSLFHEMQNRGIVPD 1034
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 152/334 (45%), Gaps = 7/334 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L L K+ + + ++ M+KQ + + Y+ LI+ + + + A+ LFS M +
Sbjct: 374 ILVNALCKAGRINEAFDLLDTMRKQ-GVLPNLHTYNTLISGLLRANRLDDALDLFSNMES 432
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G P Y LI H K+ KAL F+KMK PNIV N L + A+
Sbjct: 433 LGVEPTAYTYILLIDYH----GKSGHPGKALETFEKMKA-RGIAPNIVACNASLYSLAEM 487
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ + A+F EL S LAPD TYN +M Y K G + E +LS M QC+PD+I
Sbjct: 488 GRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVI 547
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N LID+ K ++ Q+F + PT+ T+N ++ GK KA +F+ M
Sbjct: 548 NSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNG 607
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
+P+ IT+ ++ D V A ++F +++ + V T N ++ +
Sbjct: 608 HGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKN 667
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
A LF + + PD T L K+ E
Sbjct: 668 AIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIE 700
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 141/318 (44%), Gaps = 9/318 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ I V+G+ G+ A + M + GC PD Y LI A A+ L A+ F
Sbjct: 267 YTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALC----TARKLDDAMCLF 322
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
KMK KP+ VTY LL + ++D+V ++ E+ APD+ T+ +++A K
Sbjct: 323 TKMKSSSH-KPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCK 381
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G I E +L M+ P++ T+N LI + D +F ++ +PT T
Sbjct: 382 AGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYT 441
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRAREIFDE 385
+ +I +GK+ GKA F+KM A P+ + C ++Y + + A+ +F+E
Sbjct: 442 YILLIDYHGKSGHPGKALETFEKMKARGIAPNIVA--CNASLYSLAEMGRLGEAKAMFNE 499
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
L G T N M++ Y G EA L + PD L KA
Sbjct: 500 LKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGR 559
Query: 446 KELVQKLLKRMEQNGIVP 463
E ++ RME+ + P
Sbjct: 560 VEEAWQMFCRMEEMNLAP 577
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 167/388 (43%), Gaps = 26/388 (6%)
Query: 68 SKRGRKSEELESKELV-RVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLF-EELGKS--- 122
++ G + L + LV R + + S P+++ L K+ K + + F+ F +ELG
Sbjct: 731 TEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTL 790
Query: 123 -------DKWLQCLEV------FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFS 169
D +L+ V F M K DT Y+ LI GK G+ L+
Sbjct: 791 KVYNLLIDGFLEVHNVEVAWNLFEEM-KSAGCAPDTFTYNSLIDAHGKSGKINELFDLYD 849
Query: 170 EMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALG-YFQKMKGMERCKPNIVTYNILLR 228
EM GC+P+ YN +I+ + K+ L KA+ Y+ + G P T+ L+
Sbjct: 850 EMLTRGCKPNTITYNMVISNLV----KSNRLDKAMDLYYNLVSG--DFSPTPCTFGPLID 903
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
++ +D + +F + P+ YN +++ YGK G + RM +P
Sbjct: 904 GLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRP 963
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
D+ ++ +L+D D F+ L + P L +N MI G+++ +A +F
Sbjct: 964 DLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLF 1023
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
+M P TY +I G + A +I++EL +G V T NA++ Y ++
Sbjct: 1024 HEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLS 1083
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLL 436
G A +++ G P++ T+ L
Sbjct: 1084 GNSELAYGIYKKMMVGGCDPNTGTFAQL 1111
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 153/394 (38%), Gaps = 72/394 (18%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
LG+ K + + + M D Y+ LI + + AM LF++M++S +P
Sbjct: 274 LGRDGKIDEAYRIMKRMDDDGCG-PDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKP 332
Query: 179 DPSVYNALI-----TAHLHTRDKAKALAKALGY-----------------------FQKM 210
D Y L+ HL +K +A GY F +
Sbjct: 333 DKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLL 392
Query: 211 KGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
M + PN+ TYN L+ +A +D LF + + P YTY ++D +GK+
Sbjct: 393 DTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKS 452
Query: 269 GM-----------------------------------IKEMESVLSRMKSNQCKPDIITF 293
G + E +++ + +KS+ PD +T+
Sbjct: 453 GHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTY 512
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N+++ Y K D+ ++ + + +P + NS+I KA +A +F +M
Sbjct: 513 NMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEE 572
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
M P+ +TY ++ G + +A ++F+ ++ G T N +L+ C N E
Sbjct: 573 MNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKN---DE 629
Query: 414 ADL---LFENSHNMGVTPDSSTYKLLYKAYTKAN 444
DL +F M PD T+ + + K N
Sbjct: 630 VDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQN 663
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 116/270 (42%), Gaps = 13/270 (4%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
N +YN L+ Q+ + +++ + L P + T++ +M A GK IK + +L
Sbjct: 193 NAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLL 252
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
M+S +P+I T+ + I G+ D+ ++ K + P + T+ +I A
Sbjct: 253 EEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTA 312
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
R A +F KM + + P +TY ++ + C ++ + +I+ E+ G V T
Sbjct: 313 RKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTF 372
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
++ A C G EA L + GV P+ TY L +AN + L ME
Sbjct: 373 TILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMES 432
Query: 459 NGIVPNKRFFL-------------EALETF 475
G+ P ++ +ALETF
Sbjct: 433 LGVEPTAYTYILLIDYHGKSGHPGKALETF 462
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 91/426 (21%), Positives = 170/426 (39%), Gaps = 87/426 (20%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI-YSKLIAVMGKKGQTRLAMWLFSEMRN 173
L + L K+ + + ++F M++ +A T + Y+ L+A +GK+GQ + A+ LF M
Sbjct: 550 LIDTLYKAGRVEEAWQMFCRMEEMN--LAPTVVTYNILLAGLGKEGQIQKAVQLFESMNG 607
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
GC P+ +N L L K + AL F KM M C+P+++T+N ++ +
Sbjct: 608 HGCSPNTITFNTL----LDCLCKNDEVDLALKMFYKMTTM-NCRPDVLTFNTIIHGFIKQ 662
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE-------------------- 273
+ LF ++ + +L PD T ++ K+G I++
Sbjct: 663 NQIKNAIWLFHQM-KKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSF 721
Query: 274 ----MESVLSRMKSNQ-------------CKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
M +L+ + + CK D + + I K + VF
Sbjct: 722 WEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPI-IKVLCKHKKTSVARNVFVKF 780
Query: 317 MHSKE---KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
+KE KPTL +N +I + + A +F++M + P TY +I +G
Sbjct: 781 --TKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKS 838
Query: 374 DNVSRAREIFDEL----------------------SKLGKDMKV-------------STL 398
++ +++DE+ ++L K M + T
Sbjct: 839 GKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTF 898
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
+++ +G +A +F+ + G P+S+ Y +L Y K + + KRM +
Sbjct: 899 GPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVK 958
Query: 459 NGIVPN 464
GI P+
Sbjct: 959 EGIRPD 964
>gi|27545040|gb|AAO18446.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
gi|108711829|gb|ABF99624.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 863
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 170/430 (39%), Gaps = 73/430 (16%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRL----------- 163
++ E + W + L +F++MQ+Q W D I++ +I V+G++G L
Sbjct: 104 VYREFSRRGDWQRSLRLFKYMQRQSWCRPDEHIHAIVIGVLGRQGPALLDKCLEVFHDLP 163
Query: 164 ------------------------AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKA 199
A L +M+ SG P + YN ++ A D
Sbjct: 164 SESRTALSYTSLIAAYARNALHEEARELLDQMKASGVAPTAATYNTVLAACARATDPPVP 223
Query: 200 LAKALGYFQKMKG--MERCKPNIVTYN----------------ILLR------------- 228
LG F +M+ +P++ TYN +LLR
Sbjct: 224 FDMLLGLFAEMRHDPSPSVRPDLTTYNTLLAAAAVRALSDQSEMLLRTMLEAGVLPDTAS 283
Query: 229 ------ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
A A A N+ +V LF E+ + PD Y G+M+A+ G E +VL +M+
Sbjct: 284 YRHIVDAFAGAGNLSRVAELFAEMSATGHTPDPSAYLGLMEAHTLVGATAEAVAVLRQMQ 343
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
++ C P T+ +L+D YG++ FD + ++F+ M + P T+N + +G
Sbjct: 344 ADGCPPTAATYRVLLDLYGRQGRFDGVRELFRE-MRTTVPPDTATYNVLFRVFGDGGFFK 402
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
+ +FQ M + P T E ++ G ARE+ D ++ G ++
Sbjct: 403 EVVELFQDMLHSEVEPDIDTCENVMVACGRGGLHEDAREVLDYITTEGMVPTAKAYTGLV 462
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
EA + EA + F +G P TY L A+ K + + + + RM N +
Sbjct: 463 EALGHAAMYEEAYVAFNMMTEIGSLPTIETYNALANAFAKGGLFQEAEAIFSRMTNNAAI 522
Query: 463 PNKRFFLEAL 472
+ +AL
Sbjct: 523 QKDKDSFDAL 532
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 138/326 (42%), Gaps = 11/326 (3%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ DT Y ++ G LF+EM +G PDPS Y L+ AH A A
Sbjct: 278 LPDTASYRHIVDAFAGAGNLSRVAELFAEMSATGHTPDPSAYLGLMEAHT----LVGATA 333
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+A+ ++M+ + C P TY +LL + D V LF+E+ ++ PD TYN +
Sbjct: 334 EAVAVLRQMQA-DGCPPTAATYRVLLDLYGRQGRFDGVRELFREMRTTV-PPDTATYNVL 391
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+G G KE+ + M ++ +PDI T ++ + G+ + +V +
Sbjct: 392 FRVFGDGGFFKEVVELFQDMLHSEVEPDIDTCENVMVACGRGGLHEDAREVLDYITTEGM 451
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
PT + ++ G A + +A F MT + P+ TY + + A
Sbjct: 452 VPTAKAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNALANAFAKGGLFQEAEA 511
Query: 382 IFDELSK---LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
IF ++ + KD + +A++EAYC +A + PD + + +
Sbjct: 512 IFSRMTNNAAIQKDKD--SFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLN 569
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPN 464
AY A + + ++ + ++ VP+
Sbjct: 570 AYCIAGVIDESKEQFEELQSMVTVPS 595
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 92/244 (37%), Gaps = 5/244 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ +G A F+ M G P YNAL A K +A F
Sbjct: 458 YTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTIETYNALANAFA----KGGLFQEAEAIF 513
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M + + +++ L+ A Q +D + E+ +S PD + GV++AY
Sbjct: 514 SRMTNNAAIQKDKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCI 573
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G+I E + ++S P II + +++ Y + + + + + ++ T
Sbjct: 574 AGVIDESKEQFEELQSMVTVPSIIAYCMMLSLYARNDRWTDAYDLLEEMKTNRASSTHQV 633
Query: 328 FNSMIIN-YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
SMI Y EYV S + ++ + + RA + D+
Sbjct: 634 IASMIKGEYDDDSNWQMVEYVLDNSNLEGCDYSLRFFNALLDVLWWFGQKGRAARVLDQA 693
Query: 387 SKLG 390
K G
Sbjct: 694 LKYG 697
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 78/199 (39%), Gaps = 32/199 (16%)
Query: 282 KSNQCKPDIITFNLLIDSYGKRQA--FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
+ + C+PD ++I G++ DK +VF L E T ++ S+I Y +
Sbjct: 126 RQSWCRPDEHIHAIVIGVLGRQGPALLDKCLEVFHDL--PSESRTALSYTSLIAAYARNA 183
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLN 399
L +A + +M A P+ TY ++ C + FD L L +M+
Sbjct: 184 LHEEARELLDQMKASGVAPTAATYNTVLAA---CARATDPPVPFDMLLGLFAEMR----- 235
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
+ + V PD +TY L A + + + LL+ M +
Sbjct: 236 --------------------HDPSPSVRPDLTTYNTLLAAAAVRALSDQSEMLLRTMLEA 275
Query: 460 GIVPNKRFFLEALETFSSS 478
G++P+ + ++ F+ +
Sbjct: 276 GVLPDTASYRHIVDAFAGA 294
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 167/365 (45%), Gaps = 10/365 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+LF+ L ++ L +F K I D S L+ + K G+ +A + + N
Sbjct: 173 ILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDY-TCSILLNGLCKDGKVSIAEEVLQSLVN 231
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
+G P +YN LI + T + L A F +MK KP+ +TYN L+ +A
Sbjct: 232 AGLVPTRVIYNTLINGYCQTGE----LEGAFSTFGQMKS-RHIKPDHITYNALINGLCKA 286
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ L E+ ++ + P + T+N ++DAYG+ G +++ VLS M+ N KP+++++
Sbjct: 287 ERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSY 346
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+++++ K + + + H P +N++I Y + +A + +KM +
Sbjct: 347 GSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKS 406
Query: 354 MKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+PS +TY +I G C+ +S A EI + LS + N ++ A C G
Sbjct: 407 NGISPSIVTYNLLIK--GLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNI 464
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
+A L + H G+ TY L A ++ L ++M QN +VP+
Sbjct: 465 DKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIM 524
Query: 472 LETFS 476
+E +S
Sbjct: 525 VEAYS 529
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 149/332 (44%), Gaps = 13/332 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +IA M + G+ A+ +F EM P+ YN +I H+ D
Sbjct: 66 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGF------- 118
Query: 208 QKMKGMERC---KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
+++ C KPN +TYN+LL +A + + +AL E+ + PD +TY+ + D
Sbjct: 119 -RLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDG 177
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+NG K M S+ + N T ++L++ K E+V +SL+++ PT
Sbjct: 178 LSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPT 237
Query: 325 LPTFNSMIINYGK-ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+N++I Y + L+G A F +M + P ITY +I + ++ A+++
Sbjct: 238 RVIYNTLINGYCQTGELEG-AFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLL 296
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
E+ G + V T N +++AY G + ++ G+ P+ +Y + A+ K
Sbjct: 297 MEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKN 356
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+L M ++PN + + ++ +
Sbjct: 357 GKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 388
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 164/371 (44%), Gaps = 9/371 (2%)
Query: 91 SDKEPLVRTLNKYVK---VVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI 147
D + ++ KY+K + C +L L K K EV + + + I
Sbjct: 182 GDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNA-GLVPTRVI 240
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + G+ A F +M++ +PD YNALI KA+ + A
Sbjct: 241 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLC----KAERITNAQDLL 296
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M+ P + T+N L+ A + +++ + E+ E+ L P++ +Y +++A+ K
Sbjct: 297 MEMQD-NGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCK 355
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
NG I E ++L M P+ +N +ID+Y + D+ + + + + P++ T
Sbjct: 356 NGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVT 415
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N +I +AE + ++ + P ++Y +I+ Y N+ +A ++ +
Sbjct: 416 YNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMH 475
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
K G V T + ++ G E + L++ V P ++ + ++ +AY+K +
Sbjct: 476 KYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEI 535
Query: 448 LVQKLLKRMEQ 458
+ L K M Q
Sbjct: 536 KAEDLRKEMLQ 546
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 135/327 (41%), Gaps = 17/327 (5%)
Query: 155 MGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME 214
+G+ R A F + ++G RPD +N + A + D L +A+G ++M
Sbjct: 5 LGRHADVRRA---FGILASAGARPDTFAWNKAVQACVAAGD----LGEAVGMLRRMGRDG 57
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
PN +YN+++ +A +F E+ E + P+ TYN ++D + K G ++
Sbjct: 58 APPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAG 117
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
+ +M + KP+ IT+N+L+ + + + + K P F I+
Sbjct: 118 FRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPD--GFTYSILF 175
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFIT---YECIITMYGYCDN--VSRAREIFDELSKL 389
G +R G ++ + KY + +T Y C I + G C + VS A E+ L
Sbjct: 176 DGLSR-NGDSKAMLSLFG--KYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNA 232
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
G N ++ YC G A F + + PD TY L KA
Sbjct: 233 GLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNA 292
Query: 450 QKLLKRMEQNGIVPNKRFFLEALETFS 476
Q LL M+ NG+ P F ++ +
Sbjct: 293 QDLLMEMQDNGVNPTVETFNTLIDAYG 319
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 100/236 (42%), Gaps = 31/236 (13%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + G++ + +C V MQ+ + Y ++ K G+ A+ + +M +
Sbjct: 314 LIDAYGRTGQLEKCFIVLSEMQENGLK-PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK 372
Query: 175 GCRPDPSVYNALITAHLH--TRDKAKALAKAL----------GYFQKMKGM--------- 213
P+ VYNA+I A++ D+A L + + Y +KG+
Sbjct: 373 DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 432
Query: 214 ---------ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
R P+ V+YN L+ AC N+D+ L + +H+ + + TY+ ++
Sbjct: 433 EEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISG 492
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
G G + EME + +M N P N+++++Y K K E + K ++ +
Sbjct: 493 LGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 548
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 167/365 (45%), Gaps = 10/365 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+LF+ L ++ L +F K I D S L+ + K G+ +A + + N
Sbjct: 125 ILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDY-TCSILLNGLCKDGKVSIAEEVLQSLVN 183
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
+G P +YN LI + T + L A F +MK KP+ +TYN L+ +A
Sbjct: 184 AGLVPTRVIYNTLINGYCQTGE----LEGAFSTFGQMKS-RHIKPDHITYNALINGLCKA 238
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ L E+ ++ + P + T+N ++DAYG+ G +++ VLS M+ N KP+++++
Sbjct: 239 ERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSY 298
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+++++ K + + + H P +N++I Y + +A + +KM +
Sbjct: 299 GSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKS 358
Query: 354 MKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+PS +TY +I G C+ +S A EI + LS + N ++ A C G
Sbjct: 359 NGISPSIVTYNLLIK--GLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNI 416
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
+A L + H G+ TY L A ++ L ++M QN +VP+
Sbjct: 417 DKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIM 476
Query: 472 LETFS 476
+E +S
Sbjct: 477 VEAYS 481
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 149/332 (44%), Gaps = 13/332 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +IA M + G+ A+ +F EM P+ YN +I H+ D
Sbjct: 18 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGF------- 70
Query: 208 QKMKGMERC---KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
+++ C KPN +TYN+LL +A + + +AL E+ + PD +TY+ + D
Sbjct: 71 -RLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDG 129
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+NG K M S+ + N T ++L++ K E+V +SL+++ PT
Sbjct: 130 LSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPT 189
Query: 325 LPTFNSMIINYGK-ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+N++I Y + L+G A F +M + P ITY +I + ++ A+++
Sbjct: 190 RVIYNTLINGYCQTGELEG-AFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLL 248
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
E+ G + V T N +++AY G + ++ G+ P+ +Y + A+ K
Sbjct: 249 MEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKN 308
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+L M ++PN + + ++ +
Sbjct: 309 GKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 340
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 164/371 (44%), Gaps = 9/371 (2%)
Query: 91 SDKEPLVRTLNKYVK---VVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI 147
D + ++ KY+K + C +L L K K EV + + + I
Sbjct: 134 GDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNA-GLVPTRVI 192
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + G+ A F +M++ +PD YNALI KA+ + A
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLC----KAERITNAQDLL 248
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M+ P + T+N L+ A + +++ + E+ E+ L P++ +Y +++A+ K
Sbjct: 249 MEMQD-NGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCK 307
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
NG I E ++L M P+ +N +ID+Y + D+ + + + + P++ T
Sbjct: 308 NGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVT 367
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N +I +AE + ++ + P ++Y +I+ Y N+ +A ++ +
Sbjct: 368 YNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMH 427
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
K G V T + ++ G E + L++ V P ++ + ++ +AY+K +
Sbjct: 428 KYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEI 487
Query: 448 LVQKLLKRMEQ 458
+ L K M Q
Sbjct: 488 KAEDLRKEMLQ 498
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 106/266 (39%), Gaps = 14/266 (5%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
PN +YN+++ +A +F E+ E + P+ TYN ++D + K G ++ +
Sbjct: 13 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY-- 335
+M + KP+ IT+N+L+ + + + + K P T++ +
Sbjct: 73 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132
Query: 336 ---GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLG 390
KA L +Y+ +T YT C I + G C + VS A E+ L G
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYT-------CSILLNGLCKDGKVSIAEEVLQSLVNAG 185
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
N ++ YC G A F + + PD TY L KA Q
Sbjct: 186 LVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQ 245
Query: 451 KLLKRMEQNGIVPNKRFFLEALETFS 476
LL M+ NG+ P F ++ +
Sbjct: 246 DLLMEMQDNGVNPTVETFNTLIDAYG 271
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 100/236 (42%), Gaps = 31/236 (13%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + G++ + +C V MQ+ + Y ++ K G+ A+ + +M +
Sbjct: 266 LIDAYGRTGQLEKCFIVLSEMQENGLK-PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK 324
Query: 175 GCRPDPSVYNALITAHLH--TRDKAKALAKAL----------GYFQKMKGM--------- 213
P+ VYNA+I A++ D+A L + + Y +KG+
Sbjct: 325 DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 384
Query: 214 ---------ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
R P+ V+YN L+ AC N+D+ L + +H+ + + TY+ ++
Sbjct: 385 EEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISG 444
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
G G + EME + +M N P N+++++Y K K E + K ++ +
Sbjct: 445 LGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 500
>gi|297849166|ref|XP_002892464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338306|gb|EFH68723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 555
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/468 (24%), Positives = 206/468 (44%), Gaps = 35/468 (7%)
Query: 1 MALTNLSPYSLRLSTLSSSSASSSSSSSSSSFNQSSSQNYNFTHRHIPLSLRTRPRTGIC 60
+ L NL + L S + A + SS F H + +LR R + G+
Sbjct: 40 IGLKNLRCHGLMTSVCIDNVADVDDHAERSS---------EFHHYGVGNNLRARKQLGL- 89
Query: 61 CVWTRPRSKRGRKSEELE--SKELVRVLMRS--FSDKEPLVRTLNKYVKVVRSEHCFLLF 116
S G +E E + E++ L + +D LV + ++ +V C L
Sbjct: 90 -------SSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLV 142
Query: 117 EELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGC 176
L + D+ + + + R M + DT Y+ +I + KKG R A+ L +M SG
Sbjct: 143 RGLARIDQLDKAMVILRIMVMSGG-VPDTITYNMIIGNLCKKGHIRSALVLLEDMSLSGS 201
Query: 177 RPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL----RACAQ 232
PD YN +I + +A+ F K + C P ++TY +L+ R C
Sbjct: 202 PPDVITYNTVIRCMFDHGNAEQAIR-----FWKDQLRNGCPPYMITYTVLVELVCRYCGS 256
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
AR +D + +++ PDI TYN +++ + G ++E+ V+ + S+ + + +T
Sbjct: 257 ARAMD----VLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVALVIQHILSHGLELNTVT 312
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N L+ S + +D++E++ + + PT+ T+N +I KARL +A F +M
Sbjct: 313 YNTLLHSLCSNEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQML 372
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
K P +TY ++ V A E+ L + T N++++ GL
Sbjct: 373 EQKCLPDIVTYNTLLGAMSKEGMVDDAIELLGLLKSTSCLPGLITYNSVIDGLARKGLMK 432
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+A L+ + + G++PD T + L + +AN+ E ++LK G
Sbjct: 433 KALELYHHMLDAGISPDDITRRSLIYGFCRANLVEEASQVLKETSNRG 480
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/247 (19%), Positives = 97/247 (39%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+ + + L+R A+ +D+ + + + S PD TYN ++ K G I+ +
Sbjct: 133 PHFPSCSNLVRGLARIDQLDKAMVILRIMVMSGGVPDTITYNMIIGNLCKKGHIRSALVL 192
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L M + PD+IT+N +I ++ + +K + + P + T+ ++ +
Sbjct: 193 LEDMSLSGSPPDVITYNTVIRCMFDHGNAEQAIRFWKDQLRNGCPPYMITYTVLVELVCR 252
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
+A V + M P +TY ++ N+ + + G ++ T
Sbjct: 253 YCGSARAMDVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVALVIQHILSHGLELNTVT 312
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
N +L + C N E + + + P TY +L KA + +M
Sbjct: 313 YNTLLHSLCSNEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQML 372
Query: 458 QNGIVPN 464
+ +P+
Sbjct: 373 EQKCLPD 379
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 87/213 (40%), Gaps = 40/213 (18%)
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
P YN LI KA+ L++A+ +F +M ++C P+IVTYN LL A ++ VD
Sbjct: 343 PTVITYNILINGLC----KARLLSRAIDFFYQMLE-QKCLPDIVTYNTLLGAMSKEGMVD 397
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT----- 292
L L + P + TYN V+D + G++K+ + M PD IT
Sbjct: 398 DAIELLGLLKSTSCLPGLITYNSVIDGLARKGLMKKALELYHHMLDAGISPDDITRRSLI 457
Query: 293 ------------------------------FNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+ L+I K++ + +V + ++ S K
Sbjct: 458 YGFCRANLVEEASQVLKETSNRGNGIRGSTYRLVIQGLCKKREMEMAIEVVEIMLTSGCK 517
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
P + +++ + + +A + +K+T K
Sbjct: 518 PDETIYTAIVKGVEEMGMGSEAVQLQKKLTQWK 550
>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Cucumis sativus]
Length = 576
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 144/296 (48%), Gaps = 9/296 (3%)
Query: 171 MRNSGCRPDPSVYNALITAHLHTRDKAKALAKAL--GYFQKMKGMERCKPNIVTYNILLR 228
M S RPD VYN L+ A+ ++L K + Y + ++ C P TY +LL+
Sbjct: 146 MNKSTFRPDVIVYNLLMDAY-----GQRSLYKDVESTYLELLE--SHCIPTEDTYALLLK 198
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
A ++ +++ A+F E+ + L+P YN +D K G + + RMK + C+P
Sbjct: 199 AYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQP 258
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
T+ +LI+ YGK + +F + + KP + TF +++ + L KAE +F
Sbjct: 259 TTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIF 318
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
++M Y P Y ++ Y A EIF + +G + ++ N M++AY
Sbjct: 319 EQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRA 378
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
GL +A +FE +G+TP ++ LL AY+ A + ++ +M ++G+ P+
Sbjct: 379 GLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPD 434
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 150/318 (47%), Gaps = 5/318 (1%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ I + K G A+ +F M+ GC+P Y LI +++ ++ +A+ +
Sbjct: 227 VYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYTMLI--NVYGKESKSHMAQNI-- 282
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F +M+ +RCKPNI T+ L+ A A+ ++ +F+++ E+ PD+Y YN +M++Y
Sbjct: 283 FDEMR-TQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYS 341
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+ G + S M+ C+PD ++N+++D+YG+ + + VF+ + PT+
Sbjct: 342 RAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMK 401
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
+ ++ Y A K E + +M P ++ +YG + ++F +
Sbjct: 402 SHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTM 461
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
K +ST N ++ Y G + LF+ + PD T+ AY++ +
Sbjct: 462 QKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLY 521
Query: 447 ELVQKLLKRMEQNGIVPN 464
+ +L ++M G P+
Sbjct: 522 KRCLELFEKMIDAGCYPD 539
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 130/262 (49%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+P+++ YN+L+ A Q V + + EL ES P TY ++ AY K+G++++ E+
Sbjct: 152 RPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEA 211
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
V + M+ P I +N ID K K ++F + +PT T+ +I YG
Sbjct: 212 VFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYTMLINVYG 271
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
K A+ +F +M + P+ T+ ++ +A EIF+++ + G + V
Sbjct: 272 KESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVY 331
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
NA++E+Y G P A +F +MG PD ++Y ++ AY +A + E Q + + M
Sbjct: 332 AYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEM 391
Query: 457 EQNGIVPNKRFFLEALETFSSS 478
++ GI P + + L +SS+
Sbjct: 392 KRIGITPTMKSHMLLLSAYSSA 413
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 174/420 (41%), Gaps = 56/420 (13%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMG--------------------------- 156
KW + + W+ + + D +Y+ L+ G
Sbjct: 134 KWGPIILICEWIMNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTY 193
Query: 157 --------KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQ 208
K G A +F+EMR G P VYNA I + + KA+ F
Sbjct: 194 ALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVE----IFH 249
Query: 209 KMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
+MK + C+P TY +L+ + +F E+ P+I T+ +++A +
Sbjct: 250 RMK-RDGCQPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALARE 308
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
G+ ++ E + +M+ +PD+ +N L++SY + ++F + H +P ++
Sbjct: 309 GLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASY 368
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
N M+ YG+A L A+ VF++M + TP+ ++ +++ Y NV++ +I ++ K
Sbjct: 369 NIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHK 428
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
G +N+ML Y G + + LF D STY +L Y +A E
Sbjct: 429 SGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVER 488
Query: 449 VQKLLKRMEQNGIVPN-------------KRFFLEALETFSSSL-AGS--QSGSAKTDLT 492
+++L + + + P+ K+ + LE F + AG G+AK L+
Sbjct: 489 MEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGGTAKVLLS 548
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 167/389 (42%), Gaps = 23/389 (5%)
Query: 73 KSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVF 132
KS LE E V MR + P N Y+ + L K ++ +E+F
Sbjct: 202 KSGLLEKAEAVFAEMRKYG-LSPSAIVYNAYI------------DGLVKGGNNVKAVEIF 248
Query: 133 RWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH 192
M++ T Y+ LI V GK+ ++ +A +F EMR C+P+ + AL+ A
Sbjct: 249 HRMKRDGCQ-PTTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALA- 306
Query: 193 TRDKAKALAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
+ KA F++M+ G E P++ YN L+ + ++A +F +
Sbjct: 307 ---REGLCEKAEEIFEQMQEAGYE---PDVYAYNALMESYSRAGFPYGAAEIFSLMQHMG 360
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
PD +YN ++DAYG+ G+ ++ ++V MK P + + LL+ +Y K E
Sbjct: 361 CEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCE 420
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+ + S KP NSM+ YG+ GK E +F M TY +I +Y
Sbjct: 421 DIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVY 480
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
G V R E+F L + V T + + AY L LFE + G PD
Sbjct: 481 GRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDG 540
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQN 459
T K+L A + E V +++ M ++
Sbjct: 541 GTAKVLLSACSSEEQIEQVTNVVRTMHKD 569
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 55/138 (39%), Gaps = 32/138 (23%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI---------------- 187
DT + + ++ + G+ GQ LFS M+ CR D S YN LI
Sbjct: 434 DTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELF 493
Query: 188 ---------------TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
T+ + + K + L F+KM C P+ T +LL AC+
Sbjct: 494 QLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMID-AGCYPDGGTAKVLLSACSS 552
Query: 233 ARNVDQVNALFKELHESI 250
++QV + + +H+ +
Sbjct: 553 EEQIEQVTNVVRTMHKDL 570
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 149/327 (45%), Gaps = 5/327 (1%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
R + D Y+ +IA + K AM + + M +G PD YN++ LH +
Sbjct: 224 DRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI----LHGYCSS 279
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+A+G+ +KM+ + +P++VTY++L+ + + +F + + L P+I T
Sbjct: 280 GQPKEAIGFLKKMRS-DGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITT 338
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y ++ Y G + EM +L M N PD F++LI +Y K+ D+ VF +
Sbjct: 339 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMR 398
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
P T+ ++I K+ A F++M +P I Y +I C+
Sbjct: 399 QQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWE 458
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
RA E+ E+ G + N++++++C G E++ LFE +GV P+ TY L
Sbjct: 459 RAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLI 518
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPN 464
Y A + KLL M G+ PN
Sbjct: 519 NGYCLAGKMDEAMKLLSGMVSVGLKPN 545
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 152/321 (47%), Gaps = 5/321 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++S LI K+G+ AM +FS+MR G P+ Y A+I K+ + A
Sbjct: 370 DHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILC----KSGRVEDA 425
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ YF++M E P + YN L+ ++ L E+ + + + +N ++D
Sbjct: 426 MLYFEQMID-EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIID 484
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
++ K G + E E + M KP++IT+N LI+ Y D+ ++ ++ KP
Sbjct: 485 SHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKP 544
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T++++I Y K A +F++M + +P ITY I+ + A+E++
Sbjct: 545 NTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELY 604
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+++ G +++ST N +L C N L +A +F+N M + ++ T+ ++ A K
Sbjct: 605 VRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKV 664
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+ + L NG+VPN
Sbjct: 665 GRNDEAKDLFVAFSSNGLVPN 685
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 138/324 (42%), Gaps = 7/324 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y LI + G+ L + G R D + L+ + + A+
Sbjct: 86 DLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 145
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNAL--FKELHESILAPDIYTYNG 260
L ++ C PN+ +YNILL+ C + R+ + + L + PD+ +Y
Sbjct: 146 LRRMTELG----CIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
V++ + K G + S M PD++T+N +I + K QA DK +V +++ +
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P T+NS++ Y + +A +KM + P +TY ++ AR
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+IFD ++K G +++T +L+ Y G E L + G+ PD + +L AY
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
K + + +M Q G+ PN
Sbjct: 382 AKQGKVDQAMLVFSKMRQQGLNPN 405
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 17/299 (5%)
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNV 236
PD Y LI A ALG K KG + + + + LL+ CA R
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFA-ALGNVIK-KGF---RVDAIAFTPLLKGLCADKRTS 139
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ---CKPDIITF 293
D ++ + + + E P++++YN ++ +E +L M ++ PD++++
Sbjct: 140 DAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 199
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+I+ + K DK + ++ P + T+NS+I KA+ KA V M
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVK 259
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL---GKDMKVSTLNAMLEAYCMNGL 410
P +TY I ++GYC + + +E L K+ G + V T + +++ C NG
Sbjct: 260 NGVMPDCMTYNSI--LHGYCSS-GQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGR 316
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAY-TKANMKELVQKLLKRMEQNGIVPNKRFF 468
EA +F++ G+ P+ +TY L + Y TK + E+ LL M +NGI P+ F
Sbjct: 317 CMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEM-HGLLDLMVRNGIHPDHYVF 374
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 154/387 (39%), Gaps = 49/387 (12%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
K K Q + VF M++Q + Y +I ++ K G+ AM F +M + G P
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLN-PNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGN 441
Query: 181 SVYNALITAH-------------LHTRDKAKAL---------------AKALGYFQKMKG 212
VYN+LI L D+ L + + + +
Sbjct: 442 IVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFEL 501
Query: 213 MER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
M R KPN++TYN L+ A +D+ L + L P+ TY+ +++ Y K
Sbjct: 502 MVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISR 561
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
+++ + M+S+ PDIIT+N+++ + + ++++ + S + L T+N
Sbjct: 562 MEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNI 621
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
++ K +L A +FQ + M T+ +I A+++F S G
Sbjct: 622 ILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNG 681
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
T M E GL E D LF + + G T DS +V+
Sbjct: 682 LVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF------------IVR 729
Query: 451 KLLKRMEQN------GIVPNKRFFLEA 471
+LL+R E ++ K F LEA
Sbjct: 730 ELLQRGEITRAGTYLSMIDEKHFSLEA 756
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 84/198 (42%), Gaps = 22/198 (11%)
Query: 100 LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG 159
+N Y K+ R E +LF+E+ S D Y+ ++ + +
Sbjct: 553 INGYCKISRMEDALVLFKEMESS-----------------GVSPDIITYNIILQGLFQTR 595
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
+T A L+ + SG + + S YN + LH K K AL FQ + M+ K
Sbjct: 596 RTAAAKELYVRITESGTQIELSTYNII----LHGLCKNKLTDDALQMFQNLCLMD-LKLE 650
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
T+NI++ A + D+ LF + L P+ +TY + + G+++E++ +
Sbjct: 651 ARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFL 710
Query: 280 RMKSNQCKPDIITFNLLI 297
M+ N C D N ++
Sbjct: 711 SMEDNGCTVDSGMLNFIV 728
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 88/211 (41%), Gaps = 16/211 (7%)
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY-G 336
++R +++ PD+ T+ +LI + D +++ + F ++
Sbjct: 75 MARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCA 134
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM--- 393
R + V ++MT + P+ +Y I + G CD +R++E + L + D
Sbjct: 135 DKRTSDAMDIVLRRMTELGCIPNVFSYN--ILLKGLCDE-NRSQEALELLHMMADDRGGG 191
Query: 394 ---KVSTLNAMLEAYCMNGLPTEADLLFENSHNM---GVTPDSSTYKLLYKAYTKANMKE 447
V + ++ + G ++D + H M G+ PD TY + A KA +
Sbjct: 192 SPPDVVSYTTVINGFFKEG---DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMD 248
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
++L M +NG++P+ + L + SS
Sbjct: 249 KAMEVLNTMVKNGVMPDCMTYNSILHGYCSS 279
>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
Length = 592
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 172/389 (44%), Gaps = 44/389 (11%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L +K + +F+ + ++ + +Y ++ + KKG T+ A L M
Sbjct: 148 LLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQG 207
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
+P+ +Y+ +I A K L A +MK + P+I TY+ L+ A +
Sbjct: 208 STKPNTCIYSIVIDAFC----KDGMLDGATSLLNEMK-QKSIPPDIFTYSTLIDALCKLS 262
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ V LF E+ + P++ T+N V+D K G +++ E ++ M PD+IT+N
Sbjct: 263 QWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYN 322
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++ID YG R D+ ++F S+++ +P + ++N +I Y + + +A V ++++
Sbjct: 323 MIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQK 382
Query: 355 KYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLG---------------------- 390
PS +T C + ++G + A+ FDE+ G
Sbjct: 383 GLKPSIVT--CNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVE 440
Query: 391 -------------KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
+D + A+++ C NG +A FE +G+ PD TY +
Sbjct: 441 EAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMI 500
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPNKR 466
Y + + + + +L++ME NG + + R
Sbjct: 501 SGYCQEGLLDEAKDMLRKMEDNGCLADNR 529
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 144/336 (42%), Gaps = 5/336 (1%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
+ +FR + K R + + I S ++ +T L + + G + ++N L+
Sbjct: 92 VSLFREIHKLRIPVHEF-ILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLR 150
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
L +K K A+ F+K+ C+PN V Y ++ + + + L + + +
Sbjct: 151 G-LFAENKVK---DAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQ 206
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
P+ Y+ V+DA+ K+GM+ S+L+ MK PDI T++ LID+ K ++
Sbjct: 207 GSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWEN 266
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+ +F ++H P + TFNS+I K AE + + M P ITY II
Sbjct: 267 VRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIID 326
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
YG V RAREIFD + + + + N ++ Y EA + G+ P
Sbjct: 327 GYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKP 386
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
T +L + + Q M G +P+
Sbjct: 387 SIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPD 422
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 131/332 (39%), Gaps = 45/332 (13%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + L K +W +F M Y + ++ +I + K+G+ A + M
Sbjct: 254 LIDALCKLSQWENVRTLFLEMIHLNIY-PNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEK 312
Query: 175 GCRPDPSVYNALITAH-LHTR-DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
G PD YN +I + L + D+A+ + F M + +PNI++YNIL+ A+
Sbjct: 313 GVDPDVITYNMIIDGYGLRGQVDRAREI------FDSMIN-KSIEPNIISYNILINGYAR 365
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+ +D+ + +E+ + L P I T N ++ + G K ++ M S PD+ T
Sbjct: 366 QKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYT 425
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
L+ Y K ++ F L +E + + ++I K KA F+K+
Sbjct: 426 HCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLP 485
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ P ITY AM+ YC GL
Sbjct: 486 LIGLHPDVITY-----------------------------------TAMISGYCQEGLLD 510
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
EA + + G D+ TY ++ + + ++N
Sbjct: 511 EAKDMLRKMEDNGCLADNRTYNVIVRGFLRSN 542
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/308 (18%), Positives = 117/308 (37%), Gaps = 41/308 (13%)
Query: 195 DKAKALAKALGYFQKMKGMERCKP--NIVTYNILLRACAQARNVDQVNALFKELHE---- 248
+ K L A F++M R KP ++V+++ LL+A ++ V +LF+E+H+
Sbjct: 48 ENVKCLDDAFSLFRQMV---RTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIP 104
Query: 249 -----------------------SILAPDI--------YTYNGVMDAYGKNGMIKEMESV 277
S+LA +N ++ +K+ +
Sbjct: 105 VHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHL 164
Query: 278 LSRM-KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
++ + N C+P+ + + +++ K+ K + + + KP ++ +I +
Sbjct: 165 FKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFC 224
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
K + A + +M P TY +I R +F E+ L V
Sbjct: 225 KDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVC 284
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
T N++++ C G +A+ + GV PD TY ++ Y + +++ M
Sbjct: 285 TFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSM 344
Query: 457 EQNGIVPN 464
I PN
Sbjct: 345 INKSIEPN 352
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 68/158 (43%), Gaps = 5/158 (3%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
+I D + L+ K G AM F ++ + +Y A+I K L
Sbjct: 419 HIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLC----KNGKL 474
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
KA F+K+ + P+++TY ++ Q +D+ + +++ ++ D TYN
Sbjct: 475 DKAHATFEKLP-LIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNV 533
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
++ + ++ + EM++ L + + T LL+D
Sbjct: 534 IVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMD 571
>gi|297826989|ref|XP_002881377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327216|gb|EFH57636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 589
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 178/409 (43%), Gaps = 45/409 (11%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
KW + V W+ ++ + D ++ LI G+K + + A L+ ++ S C P Y
Sbjct: 147 KWDSIILVCEWILRRSSFQPDVICFNLLIDAYGQKFRFKEAESLYVQLLESRCVPTEDTY 206
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR-NVDQVNAL 242
LI A+ A + KA +M+ P++ YN + + + N +Q +
Sbjct: 207 TLLIKAYC----MAGLIEKAEAVLIEMQN-HHVSPSVTVYNAYIEGLMKRKGNTEQAIDV 261
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
F+ + P TYN +++ YGK + M+S+QCKP+I T+ L++++ +
Sbjct: 262 FQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLFCEMRSHQCKPNICTYTALVNAFAR 321
Query: 303 RQAFDKMEQVFKSL-----------------------MHSKEKPTLPTFNSMIINYGKAR 339
+K E++F+ L H +P ++N M+ YG+A
Sbjct: 322 EGLCEKAEEIFEQLQEDGHIDSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAG 381
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLN 399
L AE VF++M + P+ ++ +++ Y +V++ I E+S+ G + LN
Sbjct: 382 LHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSRARDVTKCEAIVKEMSENGVEPDTFVLN 441
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
+ML Y G T+ + + N T D STY +L Y KA E +++L +++
Sbjct: 442 SMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKER 501
Query: 460 GIVPN-------------KRFFLEALETFS---SSLAGSQSGSAKTDLT 492
P+ K+ +++ LE F S G+AK L+
Sbjct: 502 NFKPDVVTWTSRIGAYSRKKLYVKCLEIFEEMIDSGCAPDGGTAKVLLS 550
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 155/346 (44%), Gaps = 33/346 (9%)
Query: 147 IYSKLI-AVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALG 205
+Y+ I +M +KG T A+ +F M+ C+P YN +I + KA +
Sbjct: 240 VYNAYIEGLMKRKGNTEQAIDVFQRMKRDRCKPTTETYNLMINLY----GKASKSYMSWK 295
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE----------------- 248
F +M+ +CKPNI TY L+ A A+ ++ +F++L E
Sbjct: 296 LFCEMRS-HQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHIDSRAGYPYGAAEI 354
Query: 249 -SIL-----APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
S++ PD +YN ++DAYG+ G+ + E+V MK P + + LL+ +Y +
Sbjct: 355 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSR 414
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ K E + K + + +P NSM+ YG+ K E + +M T T
Sbjct: 415 ARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIST 474
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y +I +YG + R E+F EL + V T + + AY L + +FE
Sbjct: 475 YNILINIYGKAGFLERIEELFVELKERNFKPDVVTWTSRIGAYSRKKLYVKCLEIFEEMI 534
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ----NGIVPN 464
+ G PD T K+L A + + E V +L+ M + + +VPN
Sbjct: 535 DSGCAPDGGTAKVLLSACSSEDQVEQVTSVLRTMHKGVSVSSLVPN 580
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 134/247 (54%), Gaps = 10/247 (4%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A +FS M++ GC PD + YN ++ A+ +A + A F++MK + P + ++
Sbjct: 351 AAEIFSLMQHMGCEPDRASYNIMVDAY----GRAGLHSDAEAVFEEMKRL-GIAPTMKSH 405
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
+LL A ++AR+V + A+ KE+ E+ + PD + N +++ YG+ G +ME +L+ M++
Sbjct: 406 MLLLSAYSRARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMEN 465
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
C DI T+N+LI+ YGK +++E++F L KP + T+ S I Y + +L K
Sbjct: 466 GPCTADISTYNILINIYGKAGFLERIEELFVELKERNFKPDVVTWTSRIGAYSRKKLYVK 525
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL--NAM 401
+F++M P T + +++ C + + ++ L + K + VS+L N M
Sbjct: 526 CLEIFEEMIDSGCAPDGGTAKVLLSA---CSSEDQVEQVTSVLRTMHKGVSVSSLVPNLM 582
Query: 402 LEAYCMN 408
++ +N
Sbjct: 583 AKSLTVN 589
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 167/365 (45%), Gaps = 10/365 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+LF+ L ++ L +F K I D S L+ + K G+ +A + + N
Sbjct: 306 ILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDY-TCSILLNGLCKDGKVSIAEEVLQSLVN 364
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
+G P +YN LI + T + L A F +MK KP+ +TYN L+ +A
Sbjct: 365 AGLVPTRVIYNTLINGYCQTGE----LEGAFSTFGQMKS-RHIKPDHITYNALINGLCKA 419
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ L E+ ++ + P + T+N ++DAYG+ G +++ VLS M+ N KP+++++
Sbjct: 420 ERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSY 479
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+++++ K + + + H P +N++I Y + +A + +KM +
Sbjct: 480 GSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKS 539
Query: 354 MKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+PS +TY +I G C+ +S A EI + LS + N ++ A C G
Sbjct: 540 NGISPSIVTYNLLIK--GLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNI 597
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
+A L + H G+ TY L A ++ L ++M QN +VP+
Sbjct: 598 DKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIM 657
Query: 472 LETFS 476
+E +S
Sbjct: 658 VEAYS 662
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 147/329 (44%), Gaps = 7/329 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +IA M + G+ A+ +F EM P+ YN +I H+ D +
Sbjct: 199 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFS-----L 253
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ KPN +TYN+LL +A + + +AL E+ + PD +TY+ + D +
Sbjct: 254 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 313
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
NG K M S+ + N T ++L++ K E+V +SL+++ PT
Sbjct: 314 NGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 373
Query: 328 FNSMIINYGK-ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
+N++I Y + L+G A F +M + P ITY +I + ++ A+++ E+
Sbjct: 374 YNTLINGYCQTGELEG-AFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 432
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
G + V T N +++AY G + ++ G+ P+ +Y + A+ K
Sbjct: 433 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 492
Query: 447 ELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+L M ++PN + + ++ +
Sbjct: 493 PEAVAILDDMFHKDVLPNAQVYNAIIDAY 521
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 155/347 (44%), Gaps = 6/347 (1%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM 171
C +L L K K EV + + + IY+ LI + G+ A F +M
Sbjct: 339 CSILLNGLCKDGKVSIAEEVLQSLVNA-GLVPTRVIYNTLINGYCQTGELEGAFSTFGQM 397
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
++ +PD YNALI KA+ + A +M+ P + T+N L+ A
Sbjct: 398 KSRHIKPDHITYNALINGLC----KAERITNAQDLLMEMQD-NGVNPTVETFNTLIDAYG 452
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ +++ + E+ E+ L P++ +Y +++A+ KNG I E ++L M P+
Sbjct: 453 RTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQ 512
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
+N +ID+Y + D+ + + + + P++ T+N +I +AE + +
Sbjct: 513 VYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSL 572
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+ + P ++Y +I+ Y N+ +A ++ + K G V T + ++ G
Sbjct: 573 SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRL 632
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
E + L++ V P ++ + ++ +AY+K + + L K M Q
Sbjct: 633 IEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 679
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 132/323 (40%), Gaps = 11/323 (3%)
Query: 156 GKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER 215
G+ R A F + ++G RPD +N + A + D L +A+G ++M
Sbjct: 139 GRHADVRRA---FGILASAGARPDTFAWNKAVQACVAAGD----LGEAVGMLRRMGRDGA 191
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
PN +YN+++ +A +F E+ E + P+ TYN ++D + K G ++
Sbjct: 192 PPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGF 251
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
S+ +M + KP+ IT+N+L+ + + + + K P T++ +
Sbjct: 252 SLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGL 311
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDM 393
+ +F K ++K + Y C I + G C + VS A E+ L G
Sbjct: 312 SRNGDSKAMLSLFGK--SLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVP 369
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
N ++ YC G A F + + PD TY L KA Q LL
Sbjct: 370 TRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLL 429
Query: 454 KRMEQNGIVPNKRFFLEALETFS 476
M+ NG+ P F ++ +
Sbjct: 430 MEMQDNGVNPTVETFNTLIDAYG 452
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 100/236 (42%), Gaps = 31/236 (13%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + G++ + +C V MQ+ + Y ++ K G+ A+ + +M +
Sbjct: 447 LIDAYGRTGQLEKCFIVLSEMQENGLK-PNVVSYGSIVNAFCKNGKIPEAVAILDDMFHK 505
Query: 175 GCRPDPSVYNALITAHLH--TRDKAKALAKAL----------GYFQKMKGM--------- 213
P+ VYNA+I A++ D+A L + + Y +KG+
Sbjct: 506 DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 565
Query: 214 ---------ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
R P+ V+YN L+ AC N+D+ L + +H+ + + TY+ ++
Sbjct: 566 EEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISG 625
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
G G + EME + +M N P N+++++Y K K E + K ++ +
Sbjct: 626 LGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 681
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 163/343 (47%), Gaps = 9/343 (2%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
++ + IY+ +I + K A+ +F M G R D YN LI+ L +
Sbjct: 705 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISG-LSNSGRWTDA 763
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
A+ L K K PN++ + L+ + N+ + L+KE+ + P+++TYN
Sbjct: 764 ARLLRDMVKRK----IDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 819
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
+++ + +G + + + + M S C PD++T+N LI + K + + ++F + +
Sbjct: 820 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 879
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSR 378
T+N++I Y +A A+ VF +M +P +TY I + C+N + +
Sbjct: 880 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYN--ILLDCLCNNGKIEK 937
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A + ++L K D+ + T N +++ C EA LF + GV PD+ Y +
Sbjct: 938 ALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMIS 997
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
+ ++ KL +RM+++G +P++R + E L +SL+
Sbjct: 998 GLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSA 1040
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 167/347 (48%), Gaps = 23/347 (6%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT---RDKA 197
Y + +Y+ LI + K G+ +A+ L +EM G D YN L+T ++ D A
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 198 KALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+ L M+R P++VT+ L+ + N+D+ L+KE+ +S + P+
Sbjct: 232 RMLRDM---------MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TYN +++ +G + + + M S C P+++T+N LI + K + D+ ++F+ +
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Query: 317 MHSKEKPTLPTFNSMIINY---GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
+ T+N++I Y GK R+ A +F M + + TP IT+ CI+ ++G C
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRV---ALDIFCWMVSRRVTPDIITH-CIL-LHGLC 397
Query: 374 DN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
N + A FD++ + K + + N M+ C +A LF GV PD+
Sbjct: 398 VNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDAR 457
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
TY ++ K + +L++RM++ GI+ + LE SSS
Sbjct: 458 TYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSSS 504
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 136/320 (42%), Gaps = 11/320 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR-DKAKALAKALGY 206
+++++ V+ K + + ++L+ +M N G D +Y+ I H R + LG
Sbjct: 607 FTRVLTVIAKMNKFDIVIYLYHKMENLGISHD--LYSFTILIHCFCRCSRLSLALALLGK 664
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
K+ +P+IVT LL Q + +L + P++ YN V++
Sbjct: 665 MMKLGF----RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLC 720
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
KN + V M+ + D +T+N LI + ++ + ++ K P +
Sbjct: 721 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 780
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFD 384
F ++I + K +A ++++M P+ TY +I G+C + + A+ +FD
Sbjct: 781 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN--GFCIHGCLGDAKYMFD 838
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ G V T N ++ +C + + LF G+ D+ TY L Y +A
Sbjct: 839 LMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAG 898
Query: 445 MKELVQKLLKRMEQNGIVPN 464
+ QK+ RM G+ P+
Sbjct: 899 KLNVAQKVFNRMVDCGVSPD 918
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/377 (20%), Positives = 149/377 (39%), Gaps = 24/377 (6%)
Query: 88 RSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI 147
R+FSD +RT ++ +R E F LF E+ S ++
Sbjct: 33 RAFSDYREKLRT--GFLHSIRFEDAFALFFEMVHSQPLPSIVD----------------- 73
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+++L+ + ++ +M G D + LI H + L+ AL
Sbjct: 74 FTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI----HCFCRCSRLSFALSVL 129
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
KM + +P+IVT+ LL + +L + +S P++ YN ++D K
Sbjct: 130 GKMMKLGY-EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
NG + +L+ M+ D++T+N L+ + ++ + +M P + T
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
F ++I + K +A+ ++++M P+ +TY II + A++ FD ++
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G V T N ++ +C + E LF+ G D TY L Y +
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLR 368
Query: 448 LVQKLLKRMEQNGIVPN 464
+ + M + P+
Sbjct: 369 VALDIFCWMVSRRVTPD 385
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/282 (19%), Positives = 112/282 (39%), Gaps = 35/282 (12%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+IV + +L A+ D V L+ ++ ++ D+Y++ ++ + + + ++
Sbjct: 602 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 661
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L +M +P I+T L++ + + F + + S+ P + +N++I K
Sbjct: 662 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 721
Query: 338 ARLQGKAEYVF-----------------------------------QKMTAMKYTPSFIT 362
R A VF + M K P+ I
Sbjct: 722 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 781
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
+ +I + N+ AR ++ E+ + V T N+++ +C++G +A +F+
Sbjct: 782 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 841
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ G PD TY L + K+ E KL M G+V +
Sbjct: 842 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 883
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 95/231 (41%), Gaps = 6/231 (2%)
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
D +LF E+ +S P I + V+ K + + +M++ D+ +F +L
Sbjct: 586 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 645
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
I + + + +M +P++ T S++ + + +A + M +
Sbjct: 646 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 705
Query: 357 TPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P+ + Y +I G C N ++ A E+F + K G T N ++ +G T+A
Sbjct: 706 VPNVVIYNTVIN--GLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 763
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTK-ANMKELVQKLLKRMEQNGIVPN 464
L + + P+ + L + K N+ E + L K M + +VPN
Sbjct: 764 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE-ARNLYKEMIRRSVVPN 813
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 78/200 (39%)
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
S+ M ++ P I+ F ++ K FD + ++ + + L +F +I +
Sbjct: 590 SLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCF 649
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
+ A + KM + + PS +T ++ + + A + D + G V
Sbjct: 650 CRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNV 709
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
N ++ C N A +F G+ D+ TY L + + +LL+
Sbjct: 710 VIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRD 769
Query: 456 MEQNGIVPNKRFFLEALETF 475
M + I PN FF ++TF
Sbjct: 770 MVKRKIDPNVIFFTALIDTF 789
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 80/202 (39%), Gaps = 4/202 (1%)
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
++ M +Q P I+ F L+ + + ++ + + + L +F +I +
Sbjct: 57 ALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCF 116
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDM 393
+ A V KM + Y PS +T+ + ++G+C + + A + + K G +
Sbjct: 117 CRCSRLSFALSVLGKMMKLGYEPSIVTFGSL--LHGFCLVNRIGDAFSLVILMVKSGYEP 174
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
V N +++ C NG A L G+ D TY L + ++L
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 454 KRMEQNGIVPNKRFFLEALETF 475
+ M + I P+ F ++ F
Sbjct: 235 RDMMKRSINPDVVTFTALIDVF 256
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 144/300 (48%), Gaps = 9/300 (3%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA-HLHTR-DKAKA 199
+ + Y+ LI KG A EM N G YN LI A L R ++A+
Sbjct: 319 VPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAED 378
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
+ K + + KG+E P++VTYNI + + N + +LF E+ E + P + TY
Sbjct: 379 MIKEM----REKGVE---PDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYT 431
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
++D +GK + E E + PDII FN LID + D+ Q+ K + ++
Sbjct: 432 SLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNA 491
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
K P TFN+++ Y + R +A+ + +M P I+Y +I+ Y ++ A
Sbjct: 492 KVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDA 551
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
E+FDE+ LG D + T NA+++ Y G A+ L + G+TPD STY + +A
Sbjct: 552 LEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEA 611
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 167/355 (47%), Gaps = 18/355 (5%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
++F+ M K + D Y+ I+ + K+ + A + ++ SG P+ YNALI
Sbjct: 273 KIFKTM-KDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDG 331
Query: 190 HLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
+ D L KA Y +M M R ++ TYN+L+ A + +++ + KE+ E
Sbjct: 332 CCNKGD----LDKAFAYRDEM--MNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMRE 385
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
+ PD+ TYN ++ Y + G K+ S+ M +P + T+ LID +GKR +
Sbjct: 386 KGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSE 445
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM---KYTPSFITYEC 365
E+ FK + P + FN++I + + G + FQ + M K P +T+
Sbjct: 446 AEEKFKKSIKEGMLPDIIMFNALIDGHC---VNGNIDRAFQLLKEMDNAKVVPDEVTFNT 502
Query: 366 IITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+ M GYC V A+++ DE+ + G + N ++ Y G +A +F+ +
Sbjct: 503 L--MQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLS 560
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+G P TY L + Y+K + ++LL+ M+ GI P+ +L +E ++
Sbjct: 561 LGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTN 615
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 150/317 (47%), Gaps = 5/317 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ +I ++ ++G+ + A M G +P+ YN +I + R K +A +K F
Sbjct: 220 FNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYC-LRGKFEAASKI---F 275
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ MK + KP+ TYN + + R +++ + + +L ES L P+ TYN ++D
Sbjct: 276 KTMKD-KNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCN 334
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + + + M + + T+NLLI + + ++ E + K + +P + T
Sbjct: 335 KGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVT 394
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N I Y + KA +F +M P+ TY +I ++G + +S A E F +
Sbjct: 395 YNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSI 454
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
K G + NA+++ +C+NG A L + N V PD T+ L + Y + E
Sbjct: 455 KEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVE 514
Query: 448 LVQKLLKRMEQNGIVPN 464
+KLL M++ GI P+
Sbjct: 515 EAKKLLDEMKERGIKPD 531
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 123/284 (43%), Gaps = 5/284 (1%)
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
+R R +A Y+ LI + + + A + EMR G PD YN I +
Sbjct: 344 YRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYC 403
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
+ KAL+ F +M + +P + TY L+ + + + FK+ + +
Sbjct: 404 RCGNAKKALS----LFDEMVE-KNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGM 458
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
PDI +N ++D + NG I +L M + + PD +TFN L+ Y + + ++ ++
Sbjct: 459 LPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKK 518
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+ + KP ++N++I Y K A VF +M ++ + P+ +TY +I Y
Sbjct: 519 LLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYS 578
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
A E+ E+ G ST ++EA N E D
Sbjct: 579 KIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDLVEND 622
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 106/237 (44%), Gaps = 4/237 (1%)
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
+++E+ + + I T+N +++ + G K+ + + M+ KP+++T+N +I+ Y
Sbjct: 204 VYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYC 263
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
R F+ ++FK++ KP T+NS I K R +A V K+ P+ +
Sbjct: 264 LRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAV 323
Query: 362 TYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
TY +I G C+ ++ +A DE+ G V T N ++ A + EA+ + +
Sbjct: 324 TYNALID--GCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIK 381
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
GV PD TY + Y + + L M + I P + ++ F
Sbjct: 382 EMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFG 438
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 78/177 (44%), Gaps = 6/177 (3%)
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP---TFNSMIINYGKARLQGKAEYV 347
+ F+LL+ +Y + F K ++ + L KE +P T NS++ K A +V
Sbjct: 148 LVFDLLLSAYCQ---FRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFV 204
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
+++M M S +T+ +I + +A++ + G V T N ++ YC+
Sbjct: 205 YEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCL 264
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G A +F+ + + PD TY K E +L ++ ++G+VPN
Sbjct: 265 RGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPN 321
>gi|357123295|ref|XP_003563347.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Brachypodium distachyon]
Length = 800
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 151/316 (47%), Gaps = 5/316 (1%)
Query: 149 SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQ 208
S +IA G+ G A+ F ++++ G P YNAL L KA +AL +
Sbjct: 262 STVIAACGRDGLVDEAVAFFEDLKSRGHVPCVVTYNAL----LQVFGKAGNYMEALRVLK 317
Query: 209 KMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
+M+ CKP+ VTYN L + A+A ++ + + P+ +TYN +M AYG
Sbjct: 318 EME-ESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGILPNAFTYNTIMTAYGNA 376
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
G + E ++ MK N P + T+NL++ GK+ F+ M ++ + S P T+
Sbjct: 377 GKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMSRSGCTPNRVTW 436
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
N+M+ GK ++G V ++M + T+ +I+ YG C + + A +++DE++
Sbjct: 437 NTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTA 496
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
G ++T NA+L G T A + N G P+ +Y LL + + K
Sbjct: 497 AGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQCHAKGGNAAG 556
Query: 449 VQKLLKRMEQNGIVPN 464
++ + K + + + P+
Sbjct: 557 IEAIEKEVYEGTVFPS 572
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 168/347 (48%), Gaps = 12/347 (3%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
G + K + L +F WM+K +I Y+ ++ ++GKK + + + + EM SGC P+
Sbjct: 374 GNAGKVDEALALFDWMKKNG-FIPYVNTYNLILGMLGKKSRFNVMLEMLGEMSRSGCTPN 432
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVD 237
+N ++ A R + + L ++MK G+E C+ T+N L+ A + +
Sbjct: 433 RVTWNTML-AVCGKRGMEGYVTRVL---ERMKSCGVELCRD---TFNTLISAYGRCGSRA 485
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
++ E+ + P + TYN ++ + G +S++++MK+ KP+ ++++LL+
Sbjct: 486 NAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLL 545
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII-NYGKARLQGKAEYVFQKMTAMKY 356
+ K +E + K + P+ +++I N+ RL+G E FQ++ A +
Sbjct: 546 QCHAKGGNAAGIEAIEKEVYEGTVFPSWVILRTLVISNFKCRRLEG-IERAFQEVMARGH 604
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
P + + +++MY +A E+FD + + G + T N+M++ Y + EA+
Sbjct: 605 KPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEK 664
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
+ + + PD +Y + + K + + Q++L M +G+ P
Sbjct: 665 ILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEMIADGVRP 711
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 141/320 (44%), Gaps = 4/320 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ ++ + +G+ A+ LF+E++ G P +YN ++ + ++ +
Sbjct: 186 DVRAYTTVLHALSHEGRYERALELFAELKREGVAPTHVMYNVMLDVYGRM---GRSWPQI 242
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ ++M+ +P+ T + ++ AC + VD+ A F++L P + TYN ++
Sbjct: 243 VAMLEEMRA-AGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLKSRGHVPCVVTYNALLQ 301
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+GK G E VL M+ + CKPD +T+N L SY + +++ + +++ P
Sbjct: 302 VFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGILP 361
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T+N+++ YG A +A +F M + P TY I+ M G + E+
Sbjct: 362 NAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEML 421
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
E+S+ G T N ML G+ + E + GV T+ L AY +
Sbjct: 422 GEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRC 481
Query: 444 NMKELVQKLLKRMEQNGIVP 463
+ K+ M G P
Sbjct: 482 GSRANAFKMYDEMTAAGFTP 501
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 152/346 (43%), Gaps = 17/346 (4%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT--- 193
K R ++ Y+ L+ V GK G A+ + EM SGC+PD YN L ++
Sbjct: 285 KSRGHVPCVVTYNALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFY 344
Query: 194 RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP 253
+ AK L + KG+ PN TYN ++ A A VD+ ALF + ++ P
Sbjct: 345 EEAAKCLDTMVS-----KGI---LPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIP 396
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
+ TYN ++ GK M +L M + C P+ +T+N ++ GKR + +V
Sbjct: 397 YVNTYNLILGMLGKKSRFNVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVL 456
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
+ + + TFN++I YG+ + A ++ +MTA +TP TY ++++
Sbjct: 457 ERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQ 516
Query: 374 DNVSRAREIFDELSKLG---KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
+ + A+ I +++ G DM S L L+ + G + + + + V P
Sbjct: 517 GDWTAAQSIINKMKNEGFKPNDMSYSLL---LQCHAKGGNAAGIEAIEKEVYEGTVFPSW 573
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+ L + K E +++ + + G P+ F L ++
Sbjct: 574 VILRTLVISNFKCRRLEGIERAFQEVMARGHKPDLVIFNSMLSMYA 619
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 142/290 (48%), Gaps = 33/290 (11%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA--KALAK--- 202
Y+ L++V+ ++G A + ++M+N G +P+ Y+ L+ H + A +A+ K
Sbjct: 506 YNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVY 565
Query: 203 --------------ALGYFQ--KMKGMERC---------KPNIVTYNILLRACAQARNVD 237
+ F+ +++G+ER KP++V +N +L A+
Sbjct: 566 EGTVFPSWVILRTLVISNFKCRRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYR 625
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ +F + + L+PD+ TYN +MD Y K+ E E +L R+K++Q KPD++++N ++
Sbjct: 626 KAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVM 685
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+ + K+ + +++ ++ +P + T+++++ Y + +A V M +
Sbjct: 686 NGFCKQGLIKEAQRILSEMIADGVRPCVVTYHTLVGGYASREMFSEAREVVSYMIQRNLS 745
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGK--DMK-VSTLNAMLEA 404
P +TY ++ Y AR E+++ + D K +STL A +E+
Sbjct: 746 PMELTYRRVVDSYCKAKRFDEARGFLYEIAETDRNSDQKLLSTLTARVES 795
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 139/298 (46%), Gaps = 9/298 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ LI+ G+ G A ++ EM +G P + YNAL++ D A +
Sbjct: 471 FNTLISAYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQS----II 526
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
KMK E KPN ++Y++LL+ A+ N + A+ KE++E + P ++ + K
Sbjct: 527 NKMKN-EGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYEGTVFPSWVILRTLVISNFK 585
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
++ +E + + KPD++ FN ++ Y K + K ++F S+ P L T
Sbjct: 586 CRRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLIT 645
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDE 385
+NSM+ Y K+ +AE + +++ + P ++Y + M G+C + A+ I E
Sbjct: 646 YNSMMDMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTV--MNGFCKQGLIKEAQRILSE 703
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ G V T + ++ Y + +EA + ++P TY+ + +Y KA
Sbjct: 704 MIADGVRPCVVTYHTLVGGYASREMFSEAREVVSYMIQRNLSPMELTYRRVVDSYCKA 761
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 1/248 (0%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM-IKEMESV 277
++ Y +L A + ++ LF EL +AP YN ++D YG+ G ++ ++
Sbjct: 186 DVRAYTTVLHALSHEGRYERALELFAELKREGVAPTHVMYNVMLDVYGRMGRSWPQIVAM 245
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L M++ +PD T + +I + G+ D+ F+ L P + T+N+++ +GK
Sbjct: 246 LEEMRAAGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLKSRGHVPCVVTYNALLQVFGK 305
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
A +A V ++M P +TY + Y A + D + G T
Sbjct: 306 AGNYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGILPNAFT 365
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
N ++ AY G EA LF+ G P +TY L+ K + ++ ++L M
Sbjct: 366 YNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMS 425
Query: 458 QNGIVPNK 465
++G PN+
Sbjct: 426 RSGCTPNR 433
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 153/319 (47%), Gaps = 9/319 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ LI + +G+ + A+ LF+EM G P+ YN +I T + + A+ F
Sbjct: 161 FNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAV----DVF 216
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+KM+ CKP++VTYN ++ + + R V+ E+ + + P+++TYN ++ +
Sbjct: 217 KKME-QNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCI 275
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + E + M PD +T +L+D K + VF+++ +P + T
Sbjct: 276 LGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNIST 335
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDE 385
+N+++ Y RL +A+ VF+ M P +Y +I G+C + + A+ + E
Sbjct: 336 YNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILIN--GFCKSRRMDEAKSLLAE 393
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ + T + +++ C G P EA +F+ + G+ P+ TY +L + K
Sbjct: 394 MYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGH 453
Query: 446 KELVQKLLKRMEQNGIVPN 464
+ KLLK M++ + PN
Sbjct: 454 LDEALKLLKSMQEKKLEPN 472
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 170/356 (47%), Gaps = 14/356 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L K + +E+F M + R + + Y+ +I + K G T +A+ +F +M +
Sbjct: 164 LINGLCNEGKIKEAVELFNEMVR-RGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQN 222
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQA 233
GC+PD YN +I + K + + A+ + +M ++R PN+ TYN ++
Sbjct: 223 GCKPDVVTYNTIIDSLC----KDRLVNDAMEFLSEM--LDRGIPPNVFTYNCMVHGFCIL 276
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+++ LFKE+ + PD T ++D K GM+ E V M +P+I T+
Sbjct: 277 GQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTY 336
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N L+D Y ++ ++ ++VF+ ++ P + ++N +I + K+R +A+ + +M
Sbjct: 337 NALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYH 396
Query: 354 MKYTPSFITYECIITMYGYCDNVSRARE---IFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
P +TY + M G C R +E IF E+ G + T + +L+ +C +G
Sbjct: 397 KALNPDTVTYSTL--MQGLC-QFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGH 453
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
EA L ++ + P+ + +L + A E+ ++L ++ +GI P R
Sbjct: 454 LDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIR 509
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 141/321 (43%), Gaps = 13/321 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA--HLHTRDKAKALAKALG 205
+ K + KK Q + L ++M G + N LI L+ D A ++ LG
Sbjct: 91 FGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSI---LG 147
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
K+ P T+N L+ + + LF E+ P++ +YN +++
Sbjct: 148 KMFKLG----IHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGL 203
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G V +M+ N CKPD++T+N +IDS K + + + ++ P +
Sbjct: 204 CKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNV 263
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIF 383
T+N M+ + +A +F++M P +T ++ G C VS AR +F
Sbjct: 264 FTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVD--GLCKEGMVSEARLVF 321
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ +++ G + +ST NA+++ YC+ L EA +FE G P +Y +L + K+
Sbjct: 322 ETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKS 381
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+ + LL M + P+
Sbjct: 382 RRMDEAKSLLAEMYHKALNPD 402
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 113/242 (46%), Gaps = 9/242 (3%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALGYFQKMKGMERCKPNIV 221
A +F M GC P YN LI +R D+AK+L + Y + + P+ V
Sbjct: 352 AKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEM-YHKALN------PDTV 404
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
TY+ L++ Q + +FKE+ L P++ TY+ ++D + K+G + E +L M
Sbjct: 405 TYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSM 464
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
+ + +P+I+ +LI+ + +++F L +PT+ T+ MI K L
Sbjct: 465 QEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLS 524
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
+A +F+KM + P+ +Y +I + + S A + DE+ +ST +
Sbjct: 525 DEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQML 584
Query: 402 LE 403
L+
Sbjct: 585 LD 586
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 115/268 (42%), Gaps = 5/268 (1%)
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
++ AL F +M M +P++ + L + A+ + V +L ++ + ++Y+
Sbjct: 68 SIDDALASFYRMVRMNP-RPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSL 126
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N +++ + + S+L +M P TFN LI+ + ++F ++
Sbjct: 127 NVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVR 186
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--V 376
+P + ++N++I K A VF+KM P +TY II C + V
Sbjct: 187 RGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIID--SLCKDRLV 244
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+ A E E+ G V T N M+ +C+ G EA LF+ V PD+ T +L
Sbjct: 245 NDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTIL 304
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPN 464
K M + + + M + G+ PN
Sbjct: 305 VDGLCKEGMVSEARLVFETMTEKGVEPN 332
>gi|357162065|ref|XP_003579293.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Brachypodium distachyon]
Length = 858
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 126/509 (24%), Positives = 215/509 (42%), Gaps = 62/509 (12%)
Query: 26 SSSSSSFNQSSSQNYNFTHRHIPLSLRTRPRTGICCVWTRPRS---------------KR 70
+ S SS QN F+ P ++ + R +C + R RS R
Sbjct: 60 AGSHSSAACPPVQNPIFSGSAAPWVVQPQ-RAALCPEFRRARSTKNISKRNNRGVGSQDR 118
Query: 71 GRKSEELESKELVRVLMR-SFSDKEPLVRTLNKYVK--VVRSEHCFLLFEELGKSDK-WL 126
G ++ + + V L+R + D+ L +L+ + V ++C +L ELG DK +
Sbjct: 119 GGRTFSVAAGRCVDKLLRVAPEDRRALGASLSSFRGELVAPDDYCHIL-RELGDRDKSAI 177
Query: 127 QCLEVFRW---------MQKQRWYIA------------------DTGIY----------S 149
+ LEVF + K + A D GI S
Sbjct: 178 RALEVFHAALPLVGNGSVDKGKLLTAAIGALGKMSRPDLARRAFDAGIAGGYGNTVFANS 237
Query: 150 KLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQK 209
LI+ + G AM + M+ +G RP YNA+I A L LGYF++
Sbjct: 238 ALISAYARSGLVNEAMGVLESMKGAGLRPTTVTYNAVIDA---CGKGGVDLRFTLGYFRQ 294
Query: 210 MKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG 269
M +R P+ T+N LL AC++A +++ ALF E+ + DIYTYN +DA K G
Sbjct: 295 ML-RDRLCPDRKTFNSLLSACSRAGHLEDARALFDEMIHLGIGRDIYTYNTFIDAICKCG 353
Query: 270 MIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFN 329
I+ VL M++ KP+++T++ LID Y K + +D+ ++++ + + +N
Sbjct: 354 NIELAMQVLLDMEAKNVKPNVVTYSTLIDGYSKLEKYDEALKLYEKMKSLGIQLDRVCYN 413
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
+++ Y KA G+ V +M +TY +I YG + + ++ +
Sbjct: 414 TVLAIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGYGKQGRLDIVSFLVQDMRRR 473
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
G V T + +++ Y G+ +A ++ + G+ PD + K + E
Sbjct: 474 GVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLVEWA 533
Query: 450 QKLLKRMEQNGIVPNKRFFLEALETFSSS 478
LL M + GI PN + ++ F S
Sbjct: 534 LSLLNDMTEMGIKPNVVTYNTIIDAFGKS 562
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 150/352 (42%), Gaps = 21/352 (5%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L FR M + R D ++ L++ + G A LF EM + G D YN I
Sbjct: 289 LGYFRQMLRDR-LCPDRKTFNSLLSACSRAGHLEDARALFDEMIHLGIGRDIYTYNTFID 347
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
A K + A+ M+ + KPN+VTY+ L+ ++ D+ L++++
Sbjct: 348 AIC----KCGNIELAMQVLLDMEA-KNVKPNVVTYSTLIDGYSKLEKYDEALKLYEKMKS 402
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
+ D YN V+ Y K G E+ V M+ + + D +T+N LI+ YGK+ D
Sbjct: 403 LGIQLDRVCYNTVLAIYVKAGKYGEIAIVCDEMEDSGIEKDTVTYNSLINGYGKQGRLDI 462
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+ + + + P++ T++++I Y KA + G A V+ P + + I
Sbjct: 463 VSFLVQDMRRRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFID 522
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT- 427
V A + ++++++G V T N +++A+ + + +E D + MG+
Sbjct: 523 TLAKNGLVEWALSLLNDMTEMGIKPNVVTYNTIIDAFGKSKVLSEED---PEAGEMGIVG 579
Query: 428 -----------PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
P + + ++ + +L ++M Q G+ PN F
Sbjct: 580 VYNGQIIRAANPVTRGRSAIDVRMRRSQELYFILELFQKMVQQGVRPNVVTF 631
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 146/342 (42%), Gaps = 34/342 (9%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + K +K+ + L+++ M+ + D Y+ ++A+ K G+ + EM +S
Sbjct: 380 LIDGYSKLEKYDEALKLYEKMKSLGIQL-DRVCYNTVLAIYVKAGKYGEIAIVCDEMEDS 438
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G D YN+LI + K L Q M+ P+++TY+ L+ ++A
Sbjct: 439 GIEKDTVTYNSLINGY----GKQGRLDIVSFLVQDMR-RRGVAPSVLTYSTLIDIYSKAG 493
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
++ + ES L PD+ ++ +D KNG+++ S+L+ M KP+++T+N
Sbjct: 494 MHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLVEWALSLLNDMTEMGIKPNVVTYN 553
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY-------- 346
+ID++GK + + + + E + +N II +G++
Sbjct: 554 TIIDAFGKSKVLSEEDP------EAGEMGIVGVYNGQIIRAANPVTRGRSAIDVRMRRSQ 607
Query: 347 -------VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLN 399
+FQKM P+ +T+ I+ C+N A + ++L +L +
Sbjct: 608 ELYFILELFQKMVQQGVRPNVVTFSAILNACSRCNNFEDAALLLEQL-RLFDNFVYGVAY 666
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+L Y + ++A LF M DS T Y A T
Sbjct: 667 GLLMGY--QEIWSQAQSLFNQLGRM----DSPTSSAFYNALT 702
>gi|356540087|ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 667
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 155/343 (45%), Gaps = 5/343 (1%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L + W + L + W+ + Y Y+ L+ + + Q LA LF EMR G P
Sbjct: 118 LSREPDWQRALALLDWINDKALYRPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSP 177
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
D Y+ LIT K +L + Q+M+ + ++V Y+ L+ + + +
Sbjct: 178 DRYTYSTLITCF----GKHGLFDSSLFWLQQME-QDNVSGDLVLYSNLIDLARKLSDYSK 232
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
++F L S + PD+ YN +++ +GK + +E +L M+ N +PD ++++ L+
Sbjct: 233 AISIFSRLKASTITPDLIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLA 292
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
Y Q F + +F + +K L T N MI YG+ + +A+ +F M M P
Sbjct: 293 IYVDNQKFVEALSLFSEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQP 352
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+ I+Y ++ +YG D A +F + V T N M+ Y +A L
Sbjct: 353 NVISYNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLI 412
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ + G+ P++ TY + + KA + L +++ +G+
Sbjct: 413 QEMNKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGV 455
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 130/263 (49%)
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+AL + +P++ YN+LLR +A+ + LF E+ + L+PD YTY+ +
Sbjct: 126 RALALLDWINDKALYRPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTL 185
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ +GK+G+ L +M+ + D++ ++ LID K + K +F L S
Sbjct: 186 ITCFGKHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTI 245
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P L +NSMI +GKA+L +A + Q+M P ++Y ++ +Y A
Sbjct: 246 TPDLIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALS 305
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+F E+++ + ++T N M++ Y +P EAD LF + MG+ P+ +Y L + Y
Sbjct: 306 LFSEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLLRVYG 365
Query: 442 KANMKELVQKLLKRMEQNGIVPN 464
+A++ L + M+ + N
Sbjct: 366 EADLFGEAIHLFRLMQSKDVQQN 388
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 147/316 (46%), Gaps = 14/316 (4%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
WLQ +E Q D +YS LI + K A+ +FS ++ S PD YN
Sbjct: 201 WLQQME-------QDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTITPDLIAYN 253
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
++I KAK +A Q+M+ +P+ V+Y+ LL + + +LF
Sbjct: 254 SMINVF----GKAKLFREARLLLQEMRD-NAVQPDTVSYSTLLAIYVDNQKFVEALSLFS 308
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
E++E+ D+ T N ++D YG+ M KE + + M+ +P++I++N L+ YG+
Sbjct: 309 EMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLLRVYGEAD 368
Query: 305 AFDKMEQVFKSLMHSKE-KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
F + +F+ LM SK+ + + T+N+MI YGK KA + Q+M P+ ITY
Sbjct: 369 LFGEAIHLFR-LMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGIEPNAITY 427
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
II+++ + RA +F +L G + M+ AY GL A L
Sbjct: 428 STIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERTGLVAHAKRLLHELKR 487
Query: 424 MGVTPDSSTYKLLYKA 439
P + +L +A
Sbjct: 488 PDNIPRDTAIAILARA 503
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 152/357 (42%), Gaps = 37/357 (10%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ +I V GK R A L EMR++ +PD Y+ L+ ++ + +A
Sbjct: 248 DLIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDN----QKFVEA 303
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L F +M +C ++ T NI++ Q + + LF + + + P++ +YN ++
Sbjct: 304 LSLFSEMNE-AKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVISYNTLLR 362
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
YG+ + E + M+S + +++T+N +I+ YGK +K + + + +P
Sbjct: 363 VYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMNKRGIEP 422
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T++++I + KA +A +FQK+ + + Y+ +I Y V+ A+ +
Sbjct: 423 NAITYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERTGLVAHAKRLL 482
Query: 384 DELSK---LGKDMKVSTL----------------------------NAMLEAYCMNGLPT 412
EL + + +D ++ L M+ + N
Sbjct: 483 HELKRPDNIPRDTAIAILARAGRIEEATWVFRQAFDAREVKDISVFGCMINLFSKNKKYA 542
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV-PNKRFF 468
+FE +G PDS L+ A+ K + L ++M + G V P++ F
Sbjct: 543 NVVEVFEKMREVGYFPDSDVIALVLNAFGKLREFDKADALYRQMHEEGCVFPDEVHF 599
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 113/259 (43%), Gaps = 19/259 (7%)
Query: 140 WYIADTGI------YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT 193
W + GI Y+ L+ V G+ A+ LF M++ + + YN +I + T
Sbjct: 343 WSMRKMGIQPNVISYNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKT 402
Query: 194 RDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
+ KA Q+M +G+E PN +TY+ ++ +A +D+ LF++L S +
Sbjct: 403 LEHEKAT----NLIQEMNKRGIE---PNAITYSTIISIWEKAGKLDRAAILFQKLRSSGV 455
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
D Y ++ AY + G++ + +L +K +PD I + I + ++
Sbjct: 456 RIDEVLYQTMIVAYERTGLVAHAKRLLHELK----RPDNIPRDTAIAILARAGRIEEATW 511
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
VF+ ++E + F MI + K + VF+KM + Y P ++ +G
Sbjct: 512 VFRQAFDAREVKDISVFGCMINLFSKNKKYANVVEVFEKMREVGYFPDSDVIALVLNAFG 571
Query: 372 YCDNVSRAREIFDELSKLG 390
+A ++ ++ + G
Sbjct: 572 KLREFDKADALYRQMHEEG 590
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 115/243 (47%), Gaps = 13/243 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS +I++ K G+ A LF ++R+SG R D +Y +I A+ ++ +A A
Sbjct: 427 YSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAY----ERTGLVAHAKRLL 482
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++K +P+ + + + A+A +++ +F++ ++ DI + +++ + K
Sbjct: 483 HELK-----RPDNIPRDTAIAILARAGRIEEATWVFRQAFDAREVKDISVFGCMINLFSK 537
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP- 326
N + V +M+ PD L+++++GK + FDK + +++ MH +E P
Sbjct: 538 NKKYANVVEVFEKMREVGYFPDSDVIALVLNAFGKLREFDKADALYRQ-MH-EEGCVFPD 595
Query: 327 -TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
M+ YG + E +F+K+ + + + ++Y D ++ A I +
Sbjct: 596 EVHFQMLSLYGARKDFVMVESLFEKLDSNPNINKKELHLVVASIYERADRLNDASRIMNR 655
Query: 386 LSK 388
++K
Sbjct: 656 MNK 658
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 150/309 (48%), Gaps = 7/309 (2%)
Query: 161 TRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNI 220
T A+ LF EM+N+GC P+ YN L+ AH K+K + + + +M CKPNI
Sbjct: 804 TEAALKLFVEMKNAGCCPNIFTYNLLLDAH----GKSKRIDELFELYNEML-CRGCKPNI 858
Query: 221 VTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSR 280
+T+NI++ A ++ ++++ L+ E+ +P TY ++ K G +E +
Sbjct: 859 ITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEE 918
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI-INYGKAR 339
M QCKP+ +N+LI+ +GK + +FK ++ +P L ++ ++ + R
Sbjct: 919 MPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGR 978
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLN 399
+ Y F+++ P ++Y +I G + A +F E+ G ++ T N
Sbjct: 979 VDDAVHY-FEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYN 1037
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
A++ + G+ +A +FE MG+ P+ TY L + ++K+ K+ + K+M
Sbjct: 1038 ALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIV 1097
Query: 460 GIVPNKRFF 468
G PN F
Sbjct: 1098 GCSPNAGTF 1106
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 152/334 (45%), Gaps = 6/334 (1%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VF MQKQ + Y + + KG R A + +MR +G + YN LI
Sbjct: 144 VFDLMQKQVIN-RNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFL 202
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
L + +AL +++M E KP++ TY+ L+ A + R+ + L +E+
Sbjct: 203 L----QPGFCKEALKVYKRMIS-EGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLG 257
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
L P+IYTY + G+ G I + +L M+ C PD++T+ +LID+ DK +
Sbjct: 258 LRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAK 317
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+++ + S KP L T+ +++ +G + + +M A Y P +TY ++
Sbjct: 318 ELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEAL 377
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
V +A ++ D + G + T N ++ EA LF N ++GV P +
Sbjct: 378 CKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTA 437
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+Y L Y K E ++M++ GI+P+
Sbjct: 438 YSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPS 471
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 164/363 (45%), Gaps = 12/363 (3%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L E L KS K Q ++ M + R + + Y+ LI+ + + A+ LF+ M +
Sbjct: 372 ILVEALCKSGKVDQAFDMLDVM-RVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMES 430
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G P Y I + D KAL F+KMK P+I N L + A+
Sbjct: 431 LGVAPTAYSYVLFIDYYGKLGDPEKALDT----FEKMK-KRGIMPSIAACNASLYSLAEM 485
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ + +F ++H L+PD TYN +M Y K G I + +L+ M S C+PDII
Sbjct: 486 GRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVV 545
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N LID+ K D+ Q+F L K PT+ T+N +I GK KA +F M
Sbjct: 546 NSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKE 605
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P+ +T+ ++ D V A ++F ++ + V T N ++ G
Sbjct: 606 SGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEG---R 662
Query: 414 ADLLFENSHNMG--VTPDSST-YKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
A F H M ++PD T Y LL +++ ++ +++ + Q+G+ + + + E
Sbjct: 663 AGYAFWFYHQMKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGE 722
Query: 471 ALE 473
+E
Sbjct: 723 LME 725
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 134/277 (48%), Gaps = 6/277 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
LL + GKS + + E++ M R + ++ +I+ + K A+ L+ E+ +
Sbjct: 828 LLLDAHGKSKRIDELFELYNEML-CRGCKPNIITHNIIISALVKSNSINKALDLYYEIIS 886
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
P P Y LI L KA +A+ F++M + CKPN YNIL+ +A
Sbjct: 887 GDFSPTPCTYGPLIGGLL----KAGRSEEAMKIFEEMPDYQ-CKPNCAIYNILINGFGKA 941
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
NV+ LFK + + + PD+ +Y +++ G + + +K PD +++
Sbjct: 942 GNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSY 1001
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
NL+I+ GK + ++ +F + + P L T+N++I+++G A + +A +F+++
Sbjct: 1002 NLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQF 1061
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
M P+ TY +I + N RA +F ++ +G
Sbjct: 1062 MGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVG 1098
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 5/313 (1%)
Query: 173 NSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
NS C+ D LI + K K A F K P +YN L+
Sbjct: 746 NSICQDD-----NLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLG 800
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+ LF E+ + P+I+TYN ++DA+GK+ I E+ + + M CKP+IIT
Sbjct: 801 CNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIIT 860
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
N++I + K + +K ++ ++ PT T+ +I KA +A +F++M
Sbjct: 861 HNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMP 920
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ P+ Y +I +G NV+ A ++F + K G + + ++E M G
Sbjct: 921 DYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVD 980
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
+A FE G+ PD+ +Y L+ K+ E L M+ GI P + +
Sbjct: 981 DAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALI 1040
Query: 473 ETFSSSLAGSQSG 485
F ++ Q+G
Sbjct: 1041 LHFGNAGMVDQAG 1053
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 145/351 (41%), Gaps = 30/351 (8%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA-----------HLHTRDK 196
Y+ I V+G+ G+ A + M + GC PD Y LI A L+T+ +
Sbjct: 265 YTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMR 324
Query: 197 AKA----------LAKALGYFQKMKGMERC---------KPNIVTYNILLRACAQARNVD 237
A + L G + ++ ++R P++VTY IL+ A ++ VD
Sbjct: 325 ASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVD 384
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
Q + + + P+++TYN ++ + E + + M+S P ++ L I
Sbjct: 385 QAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFI 444
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
D YGK +K F+ + P++ N+ + + + +A+ +F + +
Sbjct: 445 DYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLS 504
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P +TY ++ Y + +A ++ E+ G + + +N++++ G EA +
Sbjct: 505 PDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQM 564
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
F ++ + P TY +L K L M+++G PN F
Sbjct: 565 FGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTF 615
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 163/343 (47%), Gaps = 9/343 (2%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
++ + IY+ +I + K A+ +F M G R D YN LI+ L +
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISG-LSNSGRWTDA 238
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
A+ L K K PN++ + L+ + N+ + L+KE+ + P+++TYN
Sbjct: 239 ARLLRDMVKRK----IDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 294
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
+++ + +G + + + + M S C PD++T+N LI + K + + ++F + +
Sbjct: 295 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 354
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSR 378
T+N++I Y +A A+ VF +M +P +TY I + C+N + +
Sbjct: 355 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYN--ILLDCLCNNGKIEK 412
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A + ++L K D+ + T N +++ C EA LF + GV PD+ Y +
Sbjct: 413 ALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMIS 472
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
+ ++ KL +RM+++G +P++R + E L +SL+
Sbjct: 473 GLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSLSA 515
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 136/320 (42%), Gaps = 11/320 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR-DKAKALAKALGY 206
+++++ V+ K + + ++L+ +M N G D +Y+ I H R + LG
Sbjct: 82 FTRVLTVIAKMNKFDIVIYLYHKMENLGISHD--LYSFTILIHCFCRCSRLSLALALLGK 139
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
K+ +P+IVT LL Q + +L + P++ YN V++
Sbjct: 140 MMKLGF----RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLC 195
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
KN + V M+ + D +T+N LI + ++ + ++ K P +
Sbjct: 196 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 255
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFD 384
F ++I + K +A ++++M P+ TY +I G+C + + A+ +FD
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN--GFCIHGCLGDAKYMFD 313
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ G V T N ++ +C + + LF G+ D+ TY L Y +A
Sbjct: 314 LMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAG 373
Query: 445 MKELVQKLLKRMEQNGIVPN 464
+ QK+ RM G+ P+
Sbjct: 374 KLNVAQKVFNRMVDCGVSPD 393
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/282 (19%), Positives = 112/282 (39%), Gaps = 35/282 (12%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+IV + +L A+ D V L+ ++ ++ D+Y++ ++ + + + ++
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L +M +P I+T L++ + + F + + S+ P + +N++I K
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 338 ARLQGKAEYVF-----------------------------------QKMTAMKYTPSFIT 362
R A VF + M K P+ I
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
+ +I + N+ AR ++ E+ + V T N+++ +C++G +A +F+
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ G PD TY L + K+ E KL M G+V +
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 358
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 95/231 (41%), Gaps = 6/231 (2%)
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
D +LF E+ +S P I + V+ K + + +M++ D+ +F +L
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
I + + + +M +P++ T S++ + + +A + M +
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 357 TPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P+ + Y +I G C N ++ A E+F + K G T N ++ +G T+A
Sbjct: 181 VPNVVIYNTVIN--GLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTK-ANMKELVQKLLKRMEQNGIVPN 464
L + + P+ + L + K N+ E + L K M + +VPN
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE-ARNLYKEMIRRSVVPN 288
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 78/200 (39%)
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
S+ M ++ P I+ F ++ K FD + ++ + + L +F +I +
Sbjct: 65 SLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCF 124
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
+ A + KM + + PS +T ++ + + A + D + G V
Sbjct: 125 CRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNV 184
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
N ++ C N A +F G+ D+ TY L + + +LL+
Sbjct: 185 VIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRD 244
Query: 456 MEQNGIVPNKRFFLEALETF 475
M + I PN FF ++TF
Sbjct: 245 MVKRKIDPNVIFFTALIDTF 264
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 151/332 (45%), Gaps = 8/332 (2%)
Query: 137 KQRWYIADTGIYSKLI---AVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT 193
K R A+ Y+ LI MGK G+ A + EMR G P+ +N LI
Sbjct: 190 KVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFC-- 247
Query: 194 RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP 253
K K ++ A+ F +M + KPN+VTYN L+ V++ AL ++ S L P
Sbjct: 248 --KDKNVSAAMKVFAEMN-RQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKP 304
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
+I T+N +++ + KN M+K+ + M P++ T+N+LID+Y K + + ++
Sbjct: 305 NIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALY 364
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
+ ++ P + T+N +I + A + +M ITY +I
Sbjct: 365 RIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNK 424
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ +A + DE+ + G T N M++ YC G A L +G + +TY
Sbjct: 425 GEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATY 484
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+L K + K + E LL M + G++PN+
Sbjct: 485 NVLIKGFCKKDKLEDANGLLNEMLEKGLIPNR 516
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 137/294 (46%), Gaps = 15/294 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALG 205
++ LI K AM +F+EM G +P+ YN+LI + ++A AL +
Sbjct: 239 FNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQM- 297
Query: 206 YFQKMKGMERC-KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
+ C KPNI+T+N LL + + V Q LF ++ + + P++ TYN ++DA
Sbjct: 298 -------VNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDA 350
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
Y K+ +++ ++ M PD+ T+N LI ++ + + + K
Sbjct: 351 YCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKAD 410
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREI 382
L T+N +I + KA + +M PS +TY +I GYC N+ A +
Sbjct: 411 LITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMID--GYCKEGNLRAALNL 468
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
++ K+G+ V+T N +++ +C +A+ L G+ P+ TY+++
Sbjct: 469 RSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIV 522
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 134/297 (45%), Gaps = 22/297 (7%)
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+L TR +A +A Y K+ + C P L+ + + + ++KE+
Sbjct: 106 NLRTRLGFEAFKRASDYGLKLS-VTSCNP-------LMSGLVKVGEIGDMEFVYKEMIRR 157
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+ P + ++N V++ K G + + ++ MK ++IT+N LID Y K KM
Sbjct: 158 RIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKM 217
Query: 310 ---EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ + K + P TFN +I + K + A VF +M P+ +TY +
Sbjct: 218 YKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSL 277
Query: 367 ITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
I G C+N V+ A + D++ + T NA+L +C N + +A LF++
Sbjct: 278 IN--GLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQ 335
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
G+TP+ +TY +L AY K E L + M G+ P+ + T++ +AG
Sbjct: 336 GITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPD-------VSTYNCLIAG 385
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 91/239 (38%), Gaps = 38/239 (15%)
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
AY KN + R K + + N L+ K ME V+K ++ + +P
Sbjct: 102 AYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEP 161
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY------------- 370
TL +FN +I K KA + + M + + ITY +I Y
Sbjct: 162 TLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKAD 221
Query: 371 -----------------------GYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
G+C NVS A ++F E+++ G V T N+++
Sbjct: 222 AILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGL 281
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
C NG EA L + N + P+ T+ L + K M + +L M + GI PN
Sbjct: 282 CNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPN 340
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 5/139 (3%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
AD Y+ LI + KG+ + A+ L EM G +P YN +I + K L
Sbjct: 409 ADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYC----KEGNLRA 464
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
AL +M+ + R N+ TYN+L++ + ++ N L E+ E L P+ TY V
Sbjct: 465 ALNLRSQMEKVGRL-ANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVT 523
Query: 263 DAYGKNGMIKEMESVLSRM 281
+ + G + ++E L ++
Sbjct: 524 EEMMEKGFVPDIEGHLYKV 542
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 77/177 (43%), Gaps = 3/177 (1%)
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
I ++L+ +Y K + FK K ++ + N ++ K G E+V+++
Sbjct: 94 IIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKE 153
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M + P+ I++ +I +++A +I +++ G V T N +++ YC G
Sbjct: 154 MIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGK 213
Query: 411 PT---EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+AD + + G+ P+ T+ +L + K K+ M + G+ PN
Sbjct: 214 IGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPN 270
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 83/187 (44%), Gaps = 10/187 (5%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + K + ++R M + D Y+ LIA + +KG A L SEM
Sbjct: 346 ILIDAYCKDENMEDAFALYRIML-GKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDT 404
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACA 231
+ D YN LI + + + + KAL +M KG+ KP+ +TYN ++
Sbjct: 405 KHLKADLITYNILIDSLCNKGE----MKKALRLLDEMCRKGL---KPSQLTYNTMIDGYC 457
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ N+ L ++ + ++ TYN ++ + K +++ +L+ M P+ +
Sbjct: 458 KEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRM 517
Query: 292 TFNLLID 298
T+ ++ +
Sbjct: 518 TYEIVTE 524
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 168/366 (45%), Gaps = 17/366 (4%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L L K K + L++ M R YS L+ + K + A LF EM
Sbjct: 85 ILIHGLAKIGKLDESLKILSEMV-MRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIR 143
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G PD ++ LI +A + A F++M C+PN+ YN+LL +
Sbjct: 144 GGHHPDRLMFYELILGLC----QAGKVKDASERFKQMP-KHGCQPNVPVYNVLLHGLCSS 198
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
++Q N LF E+ +PD+ TYN ++DA K ++E + M++ P++ITF
Sbjct: 199 GQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITF 258
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+ LI + +K +VF S++ + KP T+ ++I +A +A +F+KMT
Sbjct: 259 STLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQ 318
Query: 354 MKYTPSFITYECIITMYGYC--DNVSRAREIFDELS-KLGKDMKVSTLNAMLEAYCMNGL 410
P + Y +I GYC ++ A +++ E+S G + T N +++ +C G
Sbjct: 319 ACIPPDAVAYNSLIA--GYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGK 376
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
A+ L G+ DS TY++L ++A + ++ K+M + K+F L+
Sbjct: 377 LGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMRE------KKFLLD 430
Query: 471 ALETFS 476
+ S
Sbjct: 431 PVSCVS 436
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 181/425 (42%), Gaps = 63/425 (14%)
Query: 68 SKRGRKSEELE--SKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKW 125
+K G+ E L+ S+ ++R S LVR L K R +H LF+E+ +
Sbjct: 91 AKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRAL---AKARRVDHASSLFDEMIRG--- 144
Query: 126 LQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
+ D ++ +LI + + G+ + A F +M GC+P+ VYN
Sbjct: 145 --------------GHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNV 190
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
L LH + L +A F +MK C P++VTYN LL A +AR V++ LF+
Sbjct: 191 L----LHGLCSSGQLEQANTLFAEMKS-HSCSPDVVTYNTLLDAVCKARRVEEGCKLFEA 245
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ + P++ T++ ++ + G +++ V M CKP+ T+ LI + +
Sbjct: 246 MRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEK 305
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA-MKYTPSFITYE 364
+ ++F+ + + P +NS+I Y K +AE ++++M+ P+ +T+
Sbjct: 306 VIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFN 365
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDM-------------KVSTLNAMLEAY------ 405
+I + + RA E+ E+ G + + L+ LE Y
Sbjct: 366 TLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREK 425
Query: 406 ----------------CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
C G +A +FE + G P+ T+++L ++ K E
Sbjct: 426 KFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDA 485
Query: 450 QKLLK 454
QKL++
Sbjct: 486 QKLME 490
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 163/389 (41%), Gaps = 68/389 (17%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH------------ 190
A+ YS +I + K+ + + + EM +GC PD +N ++
Sbjct: 8 ANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREV 67
Query: 191 -------------------LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
+H K L ++L +M M P++ Y+ L+RA A
Sbjct: 68 YQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMV-MRGQTPSMQAYSSLVRALA 126
Query: 232 QARNVDQVNALFKEL------------HESILA-----------------------PDIY 256
+AR VD ++LF E+ +E IL P++
Sbjct: 127 KARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVP 186
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
YN ++ +G +++ ++ + MKS+ C PD++T+N L+D+ K + ++ ++F+++
Sbjct: 187 VYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAM 246
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+ P + TF+++I + KA VF M P+ TY +I+ + V
Sbjct: 247 RAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKV 306
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF-ENSHNMGVTPDSSTYKL 435
+ARE+F+++++ N+++ YC G EA+ L+ E S G+ P T+
Sbjct: 307 IQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNT 366
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L + K +L+ M G+ +
Sbjct: 367 LIDGFCKLGKLGRANELVAEMGTKGLAAD 395
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 19/277 (6%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
N+ TY+ ++++ + ++ + +E+ + PD++ +NGVM + ++ +++ V
Sbjct: 9 NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
M + KPD +++++LI K D+ ++ ++ + P++ ++S++ KA
Sbjct: 69 QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKA 128
Query: 339 RLQGKAEYVFQKMTAMKYTPS-FITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKV 395
R A +F +M + P + YE I+ G C V A E F ++ K G V
Sbjct: 129 RRVDHASSLFDEMIRGGHHPDRLMFYELIL---GLCQAGKVKDASERFKQMPKHGCQPNV 185
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
N +L C +G +A+ LF + +PD TY L A KA E KL +
Sbjct: 186 PVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEA 245
Query: 456 MEQNGIVPNKRFF------------LE-ALETFSSSL 479
M G VPN F LE ALE F S L
Sbjct: 246 MRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSML 282
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 107/252 (42%), Gaps = 4/252 (1%)
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
C P++ +N +++ A++ N+++ +++ + ES PD +Y+ ++ K G + E
Sbjct: 41 CNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESL 100
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
+LS M P + ++ L+ + K + D +F ++ P F +I+
Sbjct: 101 KILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGL 160
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDM 393
+A A F++M P+ Y + ++G C + + +A +F E+
Sbjct: 161 CQAGKVKDASERFKQMPKHGCQPNVPVYN--VLLHGLCSSGQLEQANTLFAEMKSHSCSP 218
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
V T N +L+A C E LFE G P+ T+ L + E ++
Sbjct: 219 DVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVF 278
Query: 454 KRMEQNGIVPNK 465
M + G PNK
Sbjct: 279 GSMLEAGCKPNK 290
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/228 (19%), Positives = 87/228 (38%), Gaps = 35/228 (15%)
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
+A +++TY+ ++ + K +E VL M + C PD+ FN ++ + + +K
Sbjct: 6 IAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAR 65
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+V++ ++ S KP +++ +I K ++ + +M TPS Y ++
Sbjct: 66 EVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRAL 125
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
V A +FDE+ + G H+ PD
Sbjct: 126 AKARRVDHASSLFDEMIRGG-------------------------------HH----PDR 150
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ L +A + + K+M ++G PN + L SS
Sbjct: 151 LMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSS 198
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 153/326 (46%), Gaps = 14/326 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y +I + K+G+ LA+ L ++M D +YN +I K K + A
Sbjct: 214 DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLC----KYKHMDDA 269
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
F KM KG+ KP++ TYN L+ + L ++ E + PD+ +N +
Sbjct: 270 FDLFNKMETKGI---KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNAL 326
Query: 262 MDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
+DA+ K G + E E + M KS C PD++ +N LI + K + ++ +VF+ +
Sbjct: 327 IDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG 386
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSR 378
T+ ++I + +AR A+ VF++M + P +TY I + G C+ NV
Sbjct: 387 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYN--ILLDGLCNNGNVET 444
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A +F+ + K + + T M+EA C G + LF + GV P+ TY +
Sbjct: 445 ALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 504
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPN 464
+ + +KE L M+++G +PN
Sbjct: 505 GFCRKGLKEEADALFVEMKEDGPLPN 530
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 132/325 (40%), Gaps = 39/325 (12%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI+ + G+ A L S+M PD +NALI A + K L +A
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFV----KEGKLVEA 339
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ +M + C P++V YN L++ + + V++ +F+E+ + L + TY ++
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ + + V +M S+ PDI+T+N+L+D + VF+ + K
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T+ +MI KA GK E ++F
Sbjct: 460 DIVTYTTMIEALCKA---GKVE--------------------------------DGWDLF 484
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
LS G V T M+ +C GL EAD LF G P+S TY L +A +
Sbjct: 485 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRD 544
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFF 468
+ +L+K M G + F
Sbjct: 545 GDEAASAELIKEMRSCGFAGDASTF 569
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 175/433 (40%), Gaps = 46/433 (10%)
Query: 44 HRHIPLSLRTRPRTGICCVWTRPRSKRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKY 103
HRH L L+ PRT +C W RS G S++ +E L R K
Sbjct: 14 HRHTVL-LKGNPRTTLC--W--ERSFAGASSDDC---------------RENLSR---KV 50
Query: 104 VKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRL 163
++ ++ + LF ++ KS + +E +SKL++ + K + L
Sbjct: 51 LQDLKLDDAIGLFGDMVKSRPFPSIVE-----------------FSKLLSAIAKMNKFDL 93
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
+ L +M+N G + Y+ I + ALA LG K+ P+IVT
Sbjct: 94 VISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALA-ILGKMMKLG----YGPSIVTL 148
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
N LL + + AL ++ E PD T+ ++ ++ E +++ RM
Sbjct: 149 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 208
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
C+PD++T+ +I+ KR D + + K + + +N++I K +
Sbjct: 209 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDD 268
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A +F KM P TY +I+ S A + ++ + + + NA+++
Sbjct: 269 AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328
Query: 404 AYCMNGLPTEADLLF-ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
A+ G EA+ L+ E + PD Y L K + K E ++ + M Q G+V
Sbjct: 329 AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 388
Query: 463 PNKRFFLEALETF 475
N + + F
Sbjct: 389 GNTVTYTTLIHGF 401
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 156/327 (47%), Gaps = 9/327 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ ++ + GQ A+ LF +M GC+PD YN +I + K + + A
Sbjct: 337 DVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLC----KDRLVNDA 392
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+ + +M +G+ PN VTY+ +L +D+ LFKE+ + P+ T++ +
Sbjct: 393 MEFLSEMVDRGIP---PNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSIL 449
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+D + GM+ E V M +P+I T+N L++ Y R ++ +VF+ ++
Sbjct: 450 VDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGC 509
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P L ++N +I Y +R KA+ + +M+ K TP+ +TY I+ Y + A+E
Sbjct: 510 APDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQE 569
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+F ++ G + T + +L C +G EA LF++ + PD Y +L +
Sbjct: 570 LFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMF 629
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFF 468
E+ + L ++ +GI P R +
Sbjct: 630 IGGKLEVAKGLFSKLSADGIQPPGRTY 656
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 167/361 (46%), Gaps = 50/361 (13%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++ LI + +G+ ++A+ L++EM SG PD YN LI ++ + A+
Sbjct: 162 DVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVH-- 219
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F+KM+ CKPN+VTYN ++ + + R V+ E+ + PD TYN ++
Sbjct: 220 --VFKKME-QNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVH 276
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS-YGKRQAFDKME------------ 310
G + E + RM+ N CKPD++T+N++IDS Y R D +
Sbjct: 277 GLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPP 336
Query: 311 ----------------------QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
++FK + KP + +N++I + K RL A
Sbjct: 337 DVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFL 396
Query: 349 QKMTAMKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTL--NAMLEA 404
+M P+ +TY I ++G+C+ + A ++F E+ +G+++ +TL + +++
Sbjct: 397 SEMVDRGIPPNAVTYSTI--LHGFCNLGQLDEATQLFKEM--VGRNVMPNTLTFSILVDG 452
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT-KANMKELVQKLLKRMEQNGIVP 463
C G+ +EA +FE GV P+ TY L Y + M E +K+ + M G P
Sbjct: 453 LCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNE-ARKVFEIMVGKGCAP 511
Query: 464 N 464
+
Sbjct: 512 D 512
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 154/340 (45%), Gaps = 16/340 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ ++ + GQ A LF M +GC+PD YN +I + K + + A
Sbjct: 267 DAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLY----KDRLVNDA 322
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ +M + P++VTY +L +++ LFK++ + PD+ YN ++D
Sbjct: 323 ADFLSEMVD-QGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIID 381
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ K+ ++ + LS M P+ +T++ ++ + D+ Q+FK ++ P
Sbjct: 382 SLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMP 441
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRARE 381
TF+ ++ + + +A +VF+ MT P+ TY + M GYC ++ AR+
Sbjct: 442 NTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNAL--MNGYCLRCKMNEARK 499
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+F+ + G + + N ++ YC + +A L +TP++ TY + K
Sbjct: 500 VFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLC 559
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
Q+L K+M +G++P L T+S L G
Sbjct: 560 YVGRLLDAQELFKKMCSSGMLP-------TLMTYSILLNG 592
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 142/320 (44%), Gaps = 9/320 (2%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
LI + + A+ ++ +M G +PD + LI + K K A+ + +M
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLING-VCNEGKIKV---AVELYNEM 189
Query: 211 --KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
G E P++++YN L+ + N + +FK++ ++ P++ TYN ++D+ K+
Sbjct: 190 VRSGHE---PDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKD 246
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
++ + LS M PD IT+N ++ ++ ++FK + + KP + T+
Sbjct: 247 RLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTY 306
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
N +I + K RL A +M P +TY I+ Y ++ A +F ++ +
Sbjct: 307 NIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQ 366
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
G V N ++++ C + L +A + G+ P++ TY + + +
Sbjct: 367 KGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDE 426
Query: 449 VQKLLKRMEQNGIVPNKRFF 468
+L K M ++PN F
Sbjct: 427 ATQLFKEMVGRNVMPNTLTF 446
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 134/327 (40%), Gaps = 41/327 (12%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ + +F+ M+ Q+ D Y+ +I + K AM SEM + G P+ Y+ +
Sbjct: 356 EAIRLFKKME-QKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTI 414
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
LH L +A F++M G PN +T++IL+ Q V + +F+ +
Sbjct: 415 ----LHGFCNLGQLDEATQLFKEMVG-RNVMPNTLTFSILVDGLCQEGMVSEARWVFETM 469
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
E + P+IYTYN +M+ Y + E V M C PD+ ++N+LI+ Y +
Sbjct: 470 TEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRM 529
Query: 307 DKM-----------------------------------EQVFKSLMHSKEKPTLPTFNSM 331
DK +++FK + S PTL T++ +
Sbjct: 530 DKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSIL 589
Query: 332 IINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGK 391
+ K +A +F+ M K P I Y +I + A+ +F +LS G
Sbjct: 590 LNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGI 649
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLF 418
T N M++ GL EA LF
Sbjct: 650 QPPGRTYNVMIKGLLKEGLSDEAYELF 676
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 108/262 (41%), Gaps = 2/262 (0%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+P+++T+ L+ + L+ E+ S PD+ +YN +++ +G
Sbjct: 160 QPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVH 219
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
V +M+ N CKP+++T+N +IDS K + + ++ P T+NS++
Sbjct: 220 VFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLC 279
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN-VSRAREIFDELSKLGKDMKV 395
+A +F++M P +TY II Y D V+ A + E+ G V
Sbjct: 280 CLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSL-YKDRLVNDAADFLSEMVDQGIPPDV 338
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
T +L C G EA LF+ G PD Y + + K + + L
Sbjct: 339 VTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSE 398
Query: 456 MEQNGIVPNKRFFLEALETFSS 477
M GI PN + L F +
Sbjct: 399 MVDRGIPPNAVTYSTILHGFCN 420
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 111/247 (44%), Gaps = 4/247 (1%)
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+ + NIL+ + +VD +++ ++ + + PD+ T+ +++ G IK + +
Sbjct: 128 VYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYN 187
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
M + +PD+I++N LI+ + VFK + + KP + T+N++I + K R
Sbjct: 188 EMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDR 247
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVST 397
L A +M P ITY I+ +G C ++ A +F + + G V T
Sbjct: 248 LVNDAMDFLSEMVGRGIPPDAITYNSIV--HGLCCLGQLNEATRLFKRMEQNGCKPDVVT 305
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
N ++++ + L +A + G+ PD TY + +L K+ME
Sbjct: 306 YNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKME 365
Query: 458 QNGIVPN 464
Q G P+
Sbjct: 366 QKGCKPD 372
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 11/193 (5%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALGYFQKMKGMERCKPNIVTYN 224
+F M GC PD YN LI + ++R DKAKAL + +++ PN VTYN
Sbjct: 500 VFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMS-------VKKLTPNTVTYN 552
Query: 225 ILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
+++ C R +D LFK++ S + P + TY+ +++ K+G + E + MK
Sbjct: 553 TIMKGLCYVGRLLD-AQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKE 611
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+ +PDII + +LI+ + + +F L +P T+N MI K L +
Sbjct: 612 KKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDE 671
Query: 344 AEYVFQKMTAMKY 356
A +F+K MK+
Sbjct: 672 AYELFRKWKMMKH 684
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 58/152 (38%)
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGY 372
F + +P++ F + + K + Y+ +M T + + +I
Sbjct: 81 FYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCR 140
Query: 373 CDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
++V A ++ ++ KLG V T ++ C G A L+ G PD +
Sbjct: 141 LNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVIS 200
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y L + + + K+MEQNG PN
Sbjct: 201 YNTLINGLCNSGNTNMAVHVFKKMEQNGCKPN 232
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 153/332 (46%), Gaps = 6/332 (1%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
EV+ M + DT YS LI+ K G+ A+ LF EM+++ +P +Y L+
Sbjct: 218 EVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGI 277
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ K + KAL F++MK C P + TY L++ +A V++ L+K +
Sbjct: 278 YF----KVGKVEKALDLFEEMK-RAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTD 332
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS-YGKRQAFDK 308
L PD+ N +M+ GK G ++E+ +V + M + +C P ++++N +I + + + +
Sbjct: 333 GLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSE 392
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+ F + P+ T++ +I Y K KA + ++M + P Y +I
Sbjct: 393 VSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIN 452
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
G A E+F EL + ++ M++ + G +EA LF N G P
Sbjct: 453 ALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGP 512
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
D Y L KA M LL++ME+NG
Sbjct: 513 DVYAYNALMSGMVKAGMVNEANSLLRKMEENG 544
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 152/341 (44%), Gaps = 14/341 (4%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM----RNSGCRPDPSVYN 184
++ F+W K+R + D Y LI + + RL ++ + RN+ P V +
Sbjct: 110 IQFFKWAGKRRNFQHDCSTYMALIRCL---EEARLYGEMYRTIQEVVRNTYVSVGPVVLS 166
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
L+ A +AK ++KAL F + KG +CKP TYN ++ Q ++V+ ++
Sbjct: 167 ELVKA----LGRAKMVSKALSVFYQAKG-RKCKPTSSTYNSVILMLMQEGQHEKVHEVYT 221
Query: 245 EL-HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR 303
E+ +E PD TY+ ++ +Y K G + MK N +P + L+ Y K
Sbjct: 222 EMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKV 281
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
+K +F+ + + PT+ T+ +I GKA +A +++ M TP +
Sbjct: 282 GKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFL 341
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP-TEADLLFENSH 422
++ + G + +F+E+ V + N +++A + P +E F+
Sbjct: 342 NNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMK 401
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
GV+P TY +L Y K N E LL+ M++ G P
Sbjct: 402 ADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPP 442
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 136/314 (43%), Gaps = 5/314 (1%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+ S+L+ +G+ A+ +F + + C+P S YN++I + K
Sbjct: 164 VLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHE----V 219
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+ +M C P+ +TY+ L+ + + D LF E+ ++ + P Y ++ Y
Sbjct: 220 YTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYF 279
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K G +++ + MK C P + T+ LI GK ++ ++K+++ P +
Sbjct: 280 KVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVV 339
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII-TMYGYCDNVSRAREIFDE 385
N+++ GK + VF +M + TP+ ++Y +I ++ VS FD+
Sbjct: 340 FLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDK 399
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ G T + +++ YC +A LL E G P + Y L A KA
Sbjct: 400 MKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKR 459
Query: 446 KELVQKLLKRMEQN 459
E +L K +++N
Sbjct: 460 YEAANELFKELKEN 473
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 118/254 (46%), Gaps = 19/254 (7%)
Query: 130 EVFRWMQKQRWYIADTGI------YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
EV W K + AD G+ YS LI K + A+ L EM G P P+ Y
Sbjct: 392 EVSSWFDKMK---AD-GVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAY 447
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVT--YNILLRACAQARNVDQVNA 241
+LI A KAK A F+++K N+ + Y ++++ + + +
Sbjct: 448 CSLINA----LGKAKRYEAANELFKELK---ENFGNVSSRVYAVMIKHFGKCGKLSEAVD 500
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
LF E+ PD+Y YN +M K GM+ E S+L +M+ N C DI + N++++ +
Sbjct: 501 LFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFA 560
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
+ + ++F+++ H KP T+N+++ + A + +A + ++M + I
Sbjct: 561 RTGVPRRAIEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAI 620
Query: 362 TYECIITMYGYCDN 375
TY I+ G D+
Sbjct: 621 TYSSILDAVGNMDH 634
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 144/359 (40%), Gaps = 24/359 (6%)
Query: 100 LNKYVKVVRSEHCFLLFEE-------------------LGKSDKWLQCLEVFRWMQKQRW 140
L Y KV + E LFEE LGK+ + + ++++ M
Sbjct: 275 LGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTD-G 333
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
D + L+ ++GK G+ +F+EM C P YN +I A ++ +
Sbjct: 334 LTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESK---APV 390
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
++ +F KMK + P+ TY+IL+ + V++ L +E+ E P Y
Sbjct: 391 SEVSSWFDKMKA-DGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCS 449
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
+++A GK + + +K N + ++I +GK + +F + +
Sbjct: 450 LINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQG 509
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P + +N+++ KA + +A + +KM T ++ I+ + RA
Sbjct: 510 SGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAI 569
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
E+F+ + G T N +L + G+ EA L + G D+ TY + A
Sbjct: 570 EMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYSSILDA 628
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 73/182 (40%), Gaps = 7/182 (3%)
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
+ + L+ + G+ + K VF K KPT T+NS+I+ + +G+ E V +
Sbjct: 163 VVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQ---EGQHEKVHEV 219
Query: 351 MTAM----KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
T M P ITY +I+ Y A +FDE+ +L Y
Sbjct: 220 YTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYF 279
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
G +A LFE G +P TY L K KA E L K M +G+ P+
Sbjct: 280 KVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVV 339
Query: 467 FF 468
F
Sbjct: 340 FL 341
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 166/357 (46%), Gaps = 10/357 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + K+ + Q + + M + + D Y+ LI M +G A+ + S++ +
Sbjct: 202 ILLDATCKASGYRQAMVLLDEM-RAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPS 260
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
GC+PD Y ++ + L ++ K + + F +M +C P+ VT+N ++ + Q
Sbjct: 261 HGCKPDAVTYTPVLKS-LCGSERWKEVEE---LFAEMAS-NKCAPDEVTFNTIVTSLCQQ 315
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
VD+ + + E PDI TY+ ++D G + + +LSR+KS CKPD I +
Sbjct: 316 GLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAY 375
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
++ + ++ E++ ++ S P TFN++I + + L +A V ++M+
Sbjct: 376 TTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSE 435
Query: 354 MKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P +TY II G C+ + A E+ L G + T N +L+ C
Sbjct: 436 NGCNPDIVTYNSIID--GLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRW 493
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+A+ L N + PD++T+ + + + + + LK M +NG +PN+ +
Sbjct: 494 EDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTY 550
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 152/336 (45%), Gaps = 11/336 (3%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA--HLHTRDKAKA 199
I D YS ++ + G+ A+ L S +++ GC+PD Y ++ + + A+
Sbjct: 334 IPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEE 393
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L + C P+ VT+N ++ + Q VD+ + +++ E+ PDI TYN
Sbjct: 394 LMAEM-------VCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYN 446
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
++D I + +LS ++S CKPDI+TFN L+ ++ EQ+ ++MHS
Sbjct: 447 SIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHS 506
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
P TFN++I + + L +A + M P+ TY ++ A
Sbjct: 507 DCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEA 566
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
++ ++ D+ T N ++ G EA L + G++PD+ TY+ L
Sbjct: 567 LKLLSGMTNGTPDLI--TYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYG 624
Query: 440 YTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ + + ++L R++ G+ P+ F+ + L F
Sbjct: 625 ICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGF 660
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 146/324 (45%), Gaps = 17/324 (5%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALA 201
D ++ +IA + +KG A+ + +M +GC PD YN++I + R D A L
Sbjct: 406 DEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELL 465
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
L + CKP+IVT+N LL+ + L + S PD T+N V
Sbjct: 466 SNLQSYG-------CKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTV 518
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH-SK 320
+ + + G++ + L M N C P+ T+N+++D+ K K ++ K L +
Sbjct: 519 ITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAG---KTQEALKLLSGMTN 575
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSR 378
P L T+N++I N KA +A + + M + +P ITY + YG C D R
Sbjct: 576 GTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSL--AYGICREDGTDR 633
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A + L +G + N +L +C N A F + + G PD STY +L +
Sbjct: 634 AIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLE 693
Query: 439 AYTKANMKELVQKLLKRMEQNGIV 462
A + + ++LL + G++
Sbjct: 694 ALAYECLLDEAKQLLVNLCSLGVL 717
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 152/346 (43%), Gaps = 27/346 (7%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ ++ + G+ A L S M PD +N LI A L R + + AL F
Sbjct: 133 YNTMVNGYCRAGRIEDARRLISGMPFP---PDTFTFNPLIRA-LCVRGR---VPDALAVF 185
Query: 208 QKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
M + R C P++VTY+ILL A +A Q L E+ PDI TYN +++A
Sbjct: 186 DDM--LHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMC 243
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
G + E ++LS + S+ CKPD +T+ ++ S + + ++E++F + +K P
Sbjct: 244 NEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEV 303
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRAREIFD 384
TFN+++ + + L +A V M+ P +TY I+ G CD V A E+
Sbjct: 304 TFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILD--GLCDVGRVDDAVELLS 361
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
L G +L+ C A+ L PD T+ + + +
Sbjct: 362 RLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKG 421
Query: 445 MKELVQKLLKRMEQNGIVP-------------NKRFFLEALETFSS 477
+ + K++++M +NG P N+R +A+E S+
Sbjct: 422 LVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSN 467
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 144/378 (38%), Gaps = 66/378 (17%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL------- 200
YS L+ K R AM L EMR GC PD YN LI A + D +AL
Sbjct: 200 YSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLP 259
Query: 201 -----AKALGYFQKMK---GMER---------------CKPNIVTYNILLRACAQARNVD 237
A+ Y +K G ER C P+ VT+N ++ + Q VD
Sbjct: 260 SHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVD 319
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD-------- 289
+ + + E PDI TY+ ++D G + + +LSR+KS CKPD
Sbjct: 320 RAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVL 379
Query: 290 ---------------------------IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+TFN +I S ++ D+ +V + + +
Sbjct: 380 KGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCN 439
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P + T+NS+I R A + + + P +T+ ++ D A ++
Sbjct: 440 PDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQL 499
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+ +T N ++ + C GL +A + G P+ STY ++ A K
Sbjct: 500 MVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLK 559
Query: 443 ANMKELVQKLLKRMEQNG 460
A + KLL M NG
Sbjct: 560 AGKTQEALKLLSGM-TNG 576
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 7/206 (3%)
Query: 274 MESVLSRMKSNQCKP-DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
++S+ S S +C P ++ N+LI E+VF +L S T+ T+N+M+
Sbjct: 81 VDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVFATLGASA---TVVTYNTMV 137
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKD 392
Y +A G+ E + ++ M + P T+ +I V A +FD++ G
Sbjct: 138 NGYCRA---GRIEDARRLISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCS 194
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
V T + +L+A C +A +L + G PD TY +L A + +
Sbjct: 195 PSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNI 254
Query: 453 LKRMEQNGIVPNKRFFLEALETFSSS 478
L + +G P+ + L++ S
Sbjct: 255 LSDLPSHGCKPDAVTYTPVLKSLCGS 280
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 126 LQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
LQ +E + M + I + Y+ ++ + K G+T+ A+ L S M N PD YN
Sbjct: 529 LQAIETLKIM-AENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNT 585
Query: 186 LITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
+I+ KA + +AL + M G+ P+ +TY L + D+ +
Sbjct: 586 VIS----NITKAGKMEEALDLLRVMVSNGL---SPDTITYRSLAYGICREDGTDRAIRML 638
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR 303
L + L+PD YN ++ + +N + M S+ C PD T+ +L+++
Sbjct: 639 CRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYE 698
Query: 304 QAFDKMEQVFKSL 316
D+ +Q+ +L
Sbjct: 699 CLLDEAKQLLVNL 711
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 158/357 (44%), Gaps = 30/357 (8%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKA-- 199
+ DT +Y+ L+ K+G R A F EM + PD Y A+I+ D +A
Sbjct: 771 LPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 830
Query: 200 -----LAKAL------------GY---------FQKMKGMER--CKPNIVTYNILLRACA 231
L + L GY F+ M + C PN+VTY L+
Sbjct: 831 LFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 890
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ ++D N L E+ + L P+I+TYN +++ K+G I+E ++ ++ D +
Sbjct: 891 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 950
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
T+ L+D+Y K DK +++ ++ +PT+ TFN ++ + + E + M
Sbjct: 951 TYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 1010
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
A P+ T+ C++ Y +N+ A I+ ++ G + T +++ +C
Sbjct: 1011 LAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNM 1070
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
EA LF+ G + STY +L K + K +++ +M ++G+ +K F
Sbjct: 1071 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIF 1127
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 156/348 (44%), Gaps = 9/348 (2%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
G+ DK + +E KQ+ ++ Y +I ++ + + A FSEM G P
Sbjct: 717 FGELDKVWKLIE----KMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILP 772
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
D VY L+ R +A +K +F +M + P+++TY ++ Q ++ +
Sbjct: 773 DTIVYTTLVDGFCK-RGDIRAASK---FFYEMHSRD-ITPDVLTYTAIISGFCQIGDMVE 827
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
LF E+ L PDI T+ +M+ Y K G IK+ V + M C P+++T+ LID
Sbjct: 828 AGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLID 887
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
K D ++ + +P + T+NS++ K+ +A + + A
Sbjct: 888 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 947
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+TY ++ Y + +A+EI E+ G + T N ++ +C++G+ + + L
Sbjct: 948 DTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 1007
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
G+ P+++T+ L K Y N + + K M G+ P+ +
Sbjct: 1008 NWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGK 1055
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 137/342 (40%), Gaps = 46/342 (13%)
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
+T A+ +F E G + + YN +I H + A L ++KG P+
Sbjct: 649 KTATAIIVFREFPEVGVCWNVASYNIVI--HFVCQLGRINEAHHLLLLMELKGY---TPD 703
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+++Y+ ++ + +D+V L +++ + L P+ YTY ++ + + E E S
Sbjct: 704 VISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFS 763
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE------------------ 321
M PD I + L+D + KR + F MHS++
Sbjct: 764 EMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYE-MHSRDITPDVLTYTAIISGFCQI 822
Query: 322 ------------------KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
+P + TF ++ Y KA A V M +P+ +TY
Sbjct: 823 GDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTY 882
Query: 364 ECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
+I G C ++ A E+ E+ K+G + T N+++ C +G EA L
Sbjct: 883 TTLID--GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 940
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
G+ D+ TY L AY K+ + Q++L M G+ P
Sbjct: 941 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQP 982
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 140/322 (43%), Gaps = 4/322 (1%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
+D ++ V+ + G A +F +M N G N + A L ++D K A
Sbjct: 596 SDPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYL-ARL-SKDCNKT-AT 652
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A+ F++ + C N+ +YNI++ Q +++ + L + PD+ +Y+ V+
Sbjct: 653 AIIVFREFPEVGVCW-NVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVI 711
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+ Y + G + ++ ++ +MK KP+ T+ +I + + E+ F ++
Sbjct: 712 NGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGIL 771
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P + +++ + K A F +M + TP +TY II+ + ++ A ++
Sbjct: 772 PDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 831
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
F E+ G + + T ++ YC G +A + + G +P+ TY L K
Sbjct: 832 FHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 891
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
+ +LL M + G+ PN
Sbjct: 892 EGDLDSANELLHEMWKIGLQPN 913
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 144/316 (45%), Gaps = 5/316 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS L+ +GK+ M L EM + G RP+ +Y I + R A + +A G
Sbjct: 230 YSALMVALGKRRDIETVMGLLQEMESLGLRPN--IYTFTICIRILGR--AGKIDEAYGIL 285
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M C P++VTY +L+ A A ++ LF ++ S PD TY ++D +
Sbjct: 286 KRMDD-AGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSD 344
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+G + ++ S M+++ PD++TF +LID+ K D+ + P L T
Sbjct: 345 HGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHT 404
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N++I + +A +F M ++ + TY I YG +A + F+++
Sbjct: 405 YNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMK 464
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G + NA L + G EA F G+ PD+ TY +L + Y KA +
Sbjct: 465 TNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVD 524
Query: 448 LVQKLLKRMEQNGIVP 463
KLL ME+NG P
Sbjct: 525 DAIKLLSEMEENGCDP 540
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 169/374 (45%), Gaps = 24/374 (6%)
Query: 95 PLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAV 154
PLV+ L K+ K V + + FL +L KS LE Y+ LI
Sbjct: 757 PLVKFLCKHGKAVDAYNVFL---KLTKSFCITPSLEA----------------YNSLIDG 797
Query: 155 MGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME 214
+ K T +A LF +M+N+GC PD YN + A K+ + + +++M
Sbjct: 798 LLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDA----LGKSGKIKELFDLYEEML-FR 852
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
CKPN +T+NI++ ++ ++D+ L+ +L +P +TY ++D K G ++E
Sbjct: 853 GCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEA 912
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
+ M C P+ +N+L++ +GK+ + ++F+ ++ +P L +++ M+
Sbjct: 913 KQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDC 972
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
A + F+++ P + Y +I G V A +FDE+ G
Sbjct: 973 LCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPD 1032
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
+ T NA++ + G+ EA ++E G+ P+ TY L + ++ + + + K
Sbjct: 1033 LYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYK 1092
Query: 455 RMEQNGIVPNKRFF 468
+M G PN F
Sbjct: 1093 KMMVGGCRPNTGTF 1106
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 145/336 (43%), Gaps = 16/336 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ I ++G+ G+ A + M ++GC PD Y LI A + A L A F
Sbjct: 265 FTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCN----AGKLNNAKELF 320
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
KMK KP+ VTY LL + ++D + + E+ PD+ T+ ++DA K
Sbjct: 321 LKMKASSH-KPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCK 379
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + E L MK P++ T+N LI + D+ ++F S+ + T T
Sbjct: 380 VGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYT 439
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDE 385
+ I YGK+ GKA F+KM P+ + C ++Y + + A+E F+
Sbjct: 440 YILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVA--CNASLYSLAEQGRLEEAKEFFNG 497
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
L K G T N ++ Y G +A L G P+ L KA+
Sbjct: 498 LKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADR 557
Query: 446 KELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
+ K+ +RM++ + P + T+++ LAG
Sbjct: 558 VDEAWKMFQRMKEMKLAP-------TVVTYNTLLAG 586
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 113/258 (43%), Gaps = 32/258 (12%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
Y+ D ++ LI + K G+ A M+ G P+ YN LI L +AL
Sbjct: 363 YLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEAL 422
Query: 201 -------------------------------AKALGYFQKMKGMERCKPNIVTYNILLRA 229
KA+ F+KMK PNIV N L +
Sbjct: 423 ELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMK-TNGIVPNIVACNASLYS 481
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
A+ +++ F L + LAPD TYN +M YGK G + + +LS M+ N C P+
Sbjct: 482 LAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPE 541
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
++ N LID+ K D+ ++F+ + K PT+ T+N+++ GK +A +F+
Sbjct: 542 VVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFK 601
Query: 350 KMTAMKYTPSFITYECII 367
M A P+ I++ ++
Sbjct: 602 GMIADDCPPNTISFNTLL 619
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 169/406 (41%), Gaps = 59/406 (14%)
Query: 113 FLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAV------MGKKGQTRLAMW 166
L + GKS + + ++ F M+ GI ++A + ++G+ A
Sbjct: 441 ILFIDYYGKSGESGKAIKTFEKMKTN-------GIVPNIVACNASLYSLAEQGRLEEAKE 493
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
F+ ++ G PD YN L+ + KA + A+ +M+ C P +V N L
Sbjct: 494 FFNGLKKCGLAPDAITYNILMRCY----GKAGRVDDAIKLLSEME-ENGCDPEVVIINSL 548
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+ +A VD+ +F+ + E LAP + TYN ++ GK G ++E ++ M ++ C
Sbjct: 549 IDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDC 608
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
P+ I+FN L+D K D ++ + P + T+N++I K A +
Sbjct: 609 PPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFW 668
Query: 347 VFQKMTAMKYTPSFITYECI---ITMYGYCDNVSR-AREIFDEL---------------- 386
+F +M + Y P ++T + + G ++ R A+E +
Sbjct: 669 LFHQMKKVIY-PDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGI 727
Query: 387 ---SKLGKDMKV-------------STLNAMLEAYCMNGLPTEA-DLLFENSHNMGVTPD 429
+++G+ + S L +++ C +G +A ++ + + + +TP
Sbjct: 728 LIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPS 787
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK---RFFLEAL 472
Y L KA + E+ L +M+ G P+ FL+AL
Sbjct: 788 LEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDAL 833
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 138/351 (39%), Gaps = 6/351 (1%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L + K E+F M K + D Y L+ G +SEM
Sbjct: 302 VLIDALCNAGKLNNAKELFLKM-KASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEA 360
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G PD + LI A K + +A G MK + PN+ TYN L+ +
Sbjct: 361 DGYLPDVVTFTILIDALC----KVGKVDEAFGTLDVMK-KQGVAPNLHTYNTLICGLLRL 415
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+D+ LF + L YTY +D YGK+G + +MK+N P+I+
Sbjct: 416 NRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVAC 475
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N + S ++ ++ ++ F L P T+N ++ YGKA A + +M
Sbjct: 476 NASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEE 535
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P + +I D V A ++F + ++ V T N +L G E
Sbjct: 536 NGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQE 595
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A LF+ P++ ++ L K +L K+L RM + P+
Sbjct: 596 ATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPD 646
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 142/387 (36%), Gaps = 66/387 (17%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRN-------------SGCRPDPSVYNALITAH 190
D Y+ +I + K+ + A WLF +M+ G D + +A A
Sbjct: 646 DVLTYNTVIYGLIKENRVNYAFWLFHQMKKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAK 705
Query: 191 ---LHTRDKAKA---------------LAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
H D A + +++ + + + C+ + V ++ C
Sbjct: 706 EFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKH 765
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+ VD N K + P + YN ++D K + + + +MK+ C PD+ T
Sbjct: 766 GKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFT 825
Query: 293 FNLLIDSYGK----RQAFDKMEQ-------------------------------VFKSLM 317
+NL +D+ GK ++ FD E+ ++ LM
Sbjct: 826 YNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLM 885
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
PT T+ +I K +A+ F++M P+ Y ++ +G +V
Sbjct: 886 SGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVE 945
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
A E+F + K G + + + M++ CM G +A FE G+ PD Y L+
Sbjct: 946 TACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMI 1005
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPN 464
++ E L M GI P+
Sbjct: 1006 NGLGRSQRVEEALSLFDEMRNRGITPD 1032
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 160/434 (36%), Gaps = 84/434 (19%)
Query: 72 RKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVR----SEHCFLLFEELGKSDKWLQ 127
RK E S E V +++S SD N ++ R +E C + E L +
Sbjct: 81 RKPESTMSSEEVYRVLKSISDPNQAFSFFNSVAEMPRVIHTTETCNYVLEMLRAHRRVED 140
Query: 128 CLEVFRWMQKQRWYIADTGI--YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
+ VF MQKQ I I Y + V+ +G R A +MR G + Y
Sbjct: 141 MVVVFNLMQKQ---IIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIG 197
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
LI H K+ +AL +++M
Sbjct: 198 LI----HLLLKSGFCREALKVYRRM----------------------------------- 218
Query: 246 LHESILAPDIYTYNGVMDAYGKN-------GMIKEMES---------------------- 276
+ E I P + TY+ +M A GK G+++EMES
Sbjct: 219 VSEGI-KPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGK 277
Query: 277 ------VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
+L RM C PD++T+ +LID+ + +++F + S KP T+ +
Sbjct: 278 IDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYIT 337
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
++ + + + +M A Y P +T+ +I V A D + K G
Sbjct: 338 LLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQG 397
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
+ T N ++ EA LF + ++G+ + TY L Y K+
Sbjct: 398 VAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAI 457
Query: 451 KLLKRMEQNGIVPN 464
K ++M+ NGIVPN
Sbjct: 458 KTFEKMKTNGIVPN 471
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 96/226 (42%), Gaps = 7/226 (3%)
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
Y+Y G++ K+G +E V RM S KP + T++ L+ + GKR+ + + + +
Sbjct: 193 YSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQE 252
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
+ +P + TF I G+A +A + ++M P +TY +I
Sbjct: 253 MESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGK 312
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
++ A+E+F ++ T +L+ + +G + G PD T+ +
Sbjct: 313 LNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTI 372
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
L A K + L M++ G+ PN L T+++ + G
Sbjct: 373 LIDALCKVGKVDEAFGTLDVMKKQGVAPN-------LHTYNTLICG 411
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 171/387 (44%), Gaps = 40/387 (10%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L +K + +F+ + ++ D +Y ++ + KKG T+ A L M
Sbjct: 148 LIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQG 207
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
+PD +YN +I A K L A +MK + P+I+TY L+ +
Sbjct: 208 ITKPDTCIYNIVIDAFC----KDGMLDGATSLLNEMK-QKNIPPDIITYTSLIDGLGKLS 262
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
++V LF E+ + PD+ T+N V+D K G +++ E +++ M +P+ IT+N
Sbjct: 263 QWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYN 322
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+++D Y R + ++F S++ +P + ++ ++I Y + + KA +F++++
Sbjct: 323 VVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQN 382
Query: 355 KYTPSFIT-------------YEC-------------IITMYGYC---------DNVSRA 379
PS +T EC I +Y +C V A
Sbjct: 383 GLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEA 442
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
F +L + +D + A++ C NG +A FE +G+ PD TY +
Sbjct: 443 MSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISG 502
Query: 440 YTKANMKELVQKLLKRMEQNGIVPNKR 466
Y + + + + +L++ME NG +P+ R
Sbjct: 503 YCQEGLLDEAKDMLRKMEDNGCLPDNR 529
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 140/336 (41%), Gaps = 40/336 (11%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
+ +FR + K R + D S ++ +T L + + G + + LI
Sbjct: 92 VSIFREIHKLRIPV-DAFALSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIR 150
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
L +K K A+ F+K+ C+P+ V Y ++ + + + L + + +
Sbjct: 151 G-LFAENKVK---DAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQ 206
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
I PD YN V+DA+ K+GM+ S+L+ MK PDIIT+ LID GK ++K
Sbjct: 207 GITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEK 266
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+ +F ++H P + TFNS+I K AE + M P+ ITY
Sbjct: 267 VRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITY----- 321
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
N +++ YC+ G A +F++ + G+ P
Sbjct: 322 ------------------------------NVVMDGYCLRGQMGRARRIFDSMIDKGIEP 351
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
D +Y L Y + + +L + + QNG+ P+
Sbjct: 352 DIISYTALINGYVEKKKMDKAMQLFREISQNGLKPS 387
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 137/314 (43%), Gaps = 10/314 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEM-RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
++ LI + + + + A+ LF ++ R + C PD +Y ++ KA
Sbjct: 145 FTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKA------- 197
Query: 207 FQKMKGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
F ++ ME+ KP+ YNI++ A + +D +L E+ + + PDI TY ++D
Sbjct: 198 FDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDG 257
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
GK +++ ++ M PD+ TFN +ID K + E++ ++ +P
Sbjct: 258 LGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPN 317
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
T+N ++ Y G+A +F M P I+Y +I Y + +A ++F
Sbjct: 318 EITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFR 377
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E+S+ G + T + +L G A + F+ G P+ T+ L Y K
Sbjct: 378 EISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNG 437
Query: 445 MKELVQKLLKRMEQ 458
+ E ++E+
Sbjct: 438 LVEEAMSHFHKLER 451
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 113/246 (45%), Gaps = 5/246 (2%)
Query: 158 KGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCK 217
+GQ A +F M + G PD Y ALI ++ + K + KA+ F+++ K
Sbjct: 331 RGQMGRARRIFDSMIDKGIEPDIISYTALINGYV----EKKKMDKAMQLFREIS-QNGLK 385
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+IVT ++LLR + + F E+ + P++YT+ ++ Y KNG+++E S
Sbjct: 386 PSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSH 445
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
+++ + +I + +I+ K DK F+ L P + T+ +MI Y +
Sbjct: 446 FHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQ 505
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
L +A+ + +KM P TY I+ + VS + E++ + +T
Sbjct: 506 EGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAAT 565
Query: 398 LNAMLE 403
+ +++
Sbjct: 566 VELLMD 571
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 143/359 (39%), Gaps = 51/359 (14%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + LGK +W + +F M Y D ++ +I + K+G+ A + + M
Sbjct: 254 LIDGLGKLSQWEKVRTLFLEMIHLNIY-PDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEK 312
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQ 232
G P+ YN ++ + R + + +A F M KG+E P+I++Y L+ +
Sbjct: 313 GVEPNEITYNVVMDGYC-LRGQ---MGRARRIFDSMIDKGIE---PDIISYTALINGYVE 365
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+ +D+ LF+E+ ++ L P I T + ++ + G + + M++ P++ T
Sbjct: 366 KKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYT 425
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
L+ Y K ++ F L +E + + ++I K KA F+K+
Sbjct: 426 HCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLP 485
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ P ITY AM+ YC GL
Sbjct: 486 LIGLHPDVITY-----------------------------------TAMISGYCQEGLLD 510
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
EA + + G PD+ TY ++ + + +++ ++ LK + K F EA
Sbjct: 511 EAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKE------IAGKSFSFEA 563
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 10/139 (7%)
Query: 132 FRWMQKQRWYIADTGI--YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
F ++++R DT I Y+ +I + K G+ A F ++ G PD Y A+I+
Sbjct: 446 FHKLERRR---EDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISG 502
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ + L +A +KM+ C P+ TYN+++R ++ V ++ A KE+
Sbjct: 503 YC----QEGLLDEAKDMLRKMED-NGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGK 557
Query: 250 ILAPDIYTYNGVMDAYGKN 268
+ + T +MD ++
Sbjct: 558 SFSFEAATVELLMDIIAED 576
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 153/309 (49%), Gaps = 13/309 (4%)
Query: 159 GQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKP 218
G A+ L EM+++G PD + +ITA + D L A+ + + M C P
Sbjct: 4 GDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGD----LDGAMDHLRSMG----CDP 55
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
N+VTY L+ A A+A+ +++ L +E+ E P++ TYN ++DA K M+ + V+
Sbjct: 56 NVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVV 115
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
+M P+++TFN L+D + KR D ++ ++ +P + T++++I K+
Sbjct: 116 KKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKS 175
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVS 396
+ +A+ V ++M A TP TY +I +G C D + A ++ ++ G V
Sbjct: 176 QKFLEAKEVLEEMKASGVTPDAFTYSALI--HGLCKADKIEEAEQMLRRMAGSGCTPDVV 233
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
++++ A+C +G EA + +PD TY + K Q +L +M
Sbjct: 234 VYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQM 293
Query: 457 EQNG-IVPN 464
+++G ++P+
Sbjct: 294 QESGDVLPD 302
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 155/351 (44%), Gaps = 37/351 (10%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA--HLHTRDKAKALAKAL- 204
Y+ LIA + + AM L EMR GC P+ YN L+ A L A+ + K +
Sbjct: 60 YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 119
Query: 205 ----------------GYFQK--------------MKGMERCKPNIVTYNILLRACAQAR 234
G+ ++ KGM +PN+VTY+ L+ +++
Sbjct: 120 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGM---RPNVVTYSALIDGLCKSQ 176
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ + +E+ S + PD +TY+ ++ K I+E E +L RM + C PD++ ++
Sbjct: 177 KFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYS 236
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT-A 353
+I ++ K + ++ + + ++ P + T+N++I K +A+ + +M +
Sbjct: 237 SIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQES 296
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P +TY +I D + A+++ D + K G + V T +++ C G E
Sbjct: 297 GDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEE 356
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A+ L + G P+ TY L KA + +++++ M G PN
Sbjct: 357 AEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPN 407
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 157/345 (45%), Gaps = 44/345 (12%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + L KS K+L+ EV M K D YS LI + K + A + M S
Sbjct: 168 LIDGLCKSQKFLEAKEVLEEM-KASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGS 226
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC PD VY+++I H K+ L +A Q+M+ +R P++VTYN ++ +
Sbjct: 227 GCTPDVVVYSSII----HAFCKSGKLLEAQKTLQEMR-KQRKSPDVVTYNTVIDGLCKLG 281
Query: 235 NVDQVNALFKELHES-ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ + + ++ ES + PD+ TY+ V++ K+ M+ E + +L RM C PD++T+
Sbjct: 282 KIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTY 341
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+ID K ++ E + + + + P + T+ ++I KAR +AE V ++M
Sbjct: 342 TTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRN 401
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P+ +TY N M+ C++G E
Sbjct: 402 AGCPPNLVTY-----------------------------------NTMVNGLCVSGRIKE 426
Query: 414 ADLLFENSHN--MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
A L + + +PD++TY+ + A +++ + ++LL++M
Sbjct: 427 AQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 120/242 (49%), Gaps = 13/242 (5%)
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
L +E+ + APD +T+ ++ A G +++ + ++S C P+++T+ LI ++
Sbjct: 12 LLEEMKSAGFAPDAFTHTPIITAMANAG---DLDGAMDHLRSMGCDPNVVTYTALIAAFA 68
Query: 302 KRQAFDKMEQVFKSLMHSKEK---PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
+ + K+E+ K L +E+ P L T+N ++ K + G A+ V +KM + P
Sbjct: 69 RAK---KLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAP 125
Query: 359 SFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
+ +T+ ++ G+C NV AR++ + G V T +A+++ C + EA
Sbjct: 126 NVMTFNSLVD--GFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKE 183
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+ E GVTPD+ TY L KA+ E +++L+RM +G P+ + + F
Sbjct: 184 VLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFC 243
Query: 477 SS 478
S
Sbjct: 244 KS 245
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 137/313 (43%), Gaps = 6/313 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ L+ K+G A L M G RP+ Y+ALI K++ +A
Sbjct: 130 FNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLC----KSQKFLEAKEVL 185
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++MK P+ TY+ L+ +A +++ + + + S PD+ Y+ ++ A+ K
Sbjct: 186 EEMKA-SGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCK 244
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK-PTLP 326
+G + E + L M+ + PD++T+N +ID K + + + + S + P +
Sbjct: 245 SGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVV 304
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T++++I K+ + +A+ + +M P +TY II C + A + +
Sbjct: 305 TYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGM 364
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
+ G V T ++ C EA+ + E N G P+ TY + +
Sbjct: 365 KRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRI 424
Query: 447 ELVQKLLKRMEQN 459
+ Q+L++RM+
Sbjct: 425 KEAQQLVQRMKDG 437
>gi|356569143|ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 658
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 156/343 (45%), Gaps = 5/343 (1%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L + W + L + W+ + Y Y+ L+ + + Q LA LF EMR G P
Sbjct: 109 LSREPDWQRALALLDWINDKALYSPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSP 168
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
D Y+ LIT+ K +L + Q+M+ + ++V Y+ L+ + + +
Sbjct: 169 DRYTYSTLITSF----GKHGLFDSSLFWLQQME-QDNVSGDLVLYSNLIDLARKLSDYSK 223
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
++F L S ++PD+ YN +++ +GK + +E +L M+ N +PD ++++ L+
Sbjct: 224 AISIFSRLKASTISPDLIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLA 283
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
Y Q F + +F + +K L T N MI YG+ + +A+ +F M M P
Sbjct: 284 IYVDNQKFVEALSLFFEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQP 343
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+ ++Y ++ +YG D A +F + V T N M+ Y +A L
Sbjct: 344 NVVSYNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLI 403
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ G+ P++ TY + + KA + L +++ +G+
Sbjct: 404 QEMKKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGV 446
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 130/263 (49%)
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+AL + P++ YN+LLR +A+ + LF E+ + L+PD YTY+ +
Sbjct: 117 RALALLDWINDKALYSPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYSTL 176
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ ++GK+G+ L +M+ + D++ ++ LID K + K +F L S
Sbjct: 177 ITSFGKHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTI 236
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P L +NSMI +GKA+L +A + Q+M P ++Y ++ +Y A
Sbjct: 237 SPDLIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEALS 296
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+F E+++ + ++T N M++ Y +P EAD LF + MG+ P+ +Y L + Y
Sbjct: 297 LFFEMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVSYNTLLRVYG 356
Query: 442 KANMKELVQKLLKRMEQNGIVPN 464
+A++ L + M+ + N
Sbjct: 357 EADLFGEAIHLFRLMQSKDVQQN 379
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 147/316 (46%), Gaps = 14/316 (4%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
WLQ +E Q D +YS LI + K A+ +FS ++ S PD YN
Sbjct: 192 WLQQME-------QDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKASTISPDLIAYN 244
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
++I KAK +A Q+M+ +P+ V+Y+ LL + + +LF
Sbjct: 245 SMINVF----GKAKLFREARLLLQEMRD-NAVQPDTVSYSTLLAIYVDNQKFVEALSLFF 299
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
E++E+ D+ T N ++D YG+ M KE + + M+ +P+++++N L+ YG+
Sbjct: 300 EMNEAKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVSYNTLLRVYGEAD 359
Query: 305 AFDKMEQVFKSLMHSKE-KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
F + +F+ LM SK+ + + T+N+MI YGK KA + Q+M P+ ITY
Sbjct: 360 LFGEAIHLFR-LMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMKKRGIEPNAITY 418
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
II+++ + RA +F +L G + M+ AY GL A L
Sbjct: 419 STIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERAGLVAHAKRLLHELKR 478
Query: 424 MGVTPDSSTYKLLYKA 439
P + +L +A
Sbjct: 479 PDNIPRDTAIGILARA 494
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 151/357 (42%), Gaps = 37/357 (10%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ +I V GK R A L EMR++ +PD Y+ L+ ++ + +A
Sbjct: 239 DLIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDN----QKFVEA 294
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L F +M +C ++ T NI++ Q + + LF + + + P++ +YN ++
Sbjct: 295 LSLFFEMNE-AKCPLDLTTCNIMIDVYGQLHMPKEADRLFWSMRKMGIQPNVVSYNTLLR 353
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
YG+ + E + M+S + +++T+N +I+ YGK +K + + + +P
Sbjct: 354 VYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKTLEHEKATNLIQEMKKRGIEP 413
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T++++I + KA +A +FQK+ + + Y+ +I Y V+ A+ +
Sbjct: 414 NAITYSTIISIWEKAGKLDRAAILFQKLRSSGVRIDEVLYQTMIVAYERAGLVAHAKRLL 473
Query: 384 DELSK---LGKDM----------------------------KVSTLNAMLEAYCMNGLPT 412
EL + + +D +S M+ + N
Sbjct: 474 HELKRPDNIPRDTAIGILARAGRIEEATWVFRQAFDAREVKDISVFGCMINLFSKNKKYG 533
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV-PNKRFF 468
+FE +G PDS L+ A+ K + L ++M + G V P++ F
Sbjct: 534 NVVEVFEKMRVVGYFPDSDVIALVLNAFGKLREFDKADALYRQMHEEGCVFPDEVHF 590
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 135/327 (41%), Gaps = 19/327 (5%)
Query: 140 WYIADTGI------YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT 193
W + GI Y+ L+ V G+ A+ LF M++ + + YN +I + T
Sbjct: 334 WSMRKMGIQPNVVSYNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMINIYGKT 393
Query: 194 RDKAKALAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
+ KA Q+MK G+E PN +TY+ ++ +A +D+ LF++L S +
Sbjct: 394 LEHEKAT----NLIQEMKKRGIE---PNAITYSTIISIWEKAGKLDRAAILFQKLRSSGV 446
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
D Y ++ AY + G++ + +L +K +PD I + I + ++
Sbjct: 447 RIDEVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIGILARAGRIEEATW 502
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
VF+ ++E + F MI + K + G VF+KM + Y P ++ +G
Sbjct: 503 VFRQAFDAREVKDISVFGCMINLFSKNKKYGNVVEVFEKMRVVGYFPDSDVIALVLNAFG 562
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+A ++ ++ + G ML Y + LFE +
Sbjct: 563 KLREFDKADALYRQMHEEGCVFPDEVHFQMLSLYGARKDFVMVESLFEKLDSNPNINKKE 622
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQ 458
+ ++ Y +A+ +++ RM Q
Sbjct: 623 LHLVVASIYERADRLNDASRIMNRMNQ 649
>gi|225452658|ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Vitis vinifera]
gi|296087770|emb|CBI35026.3| unnamed protein product [Vitis vinifera]
Length = 675
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 159/343 (46%), Gaps = 5/343 (1%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L + W + L + W+ ++ Y Y+ +I + + Q LA LF EMR P
Sbjct: 129 LSREPDWQRSLALLDWINEEASYSPSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALAP 188
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
D Y+ LIT H K AL + QKM+ +R ++V Y+ L+ + + +
Sbjct: 189 DRYTYSTLIT-HF---GKEGMFDSALSWLQKME-QDRVSGDLVLYSNLIELSRKLCDYSK 243
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
++F L S ++PD+ YN +++ +GK + +E +L M++ PD ++++ L+
Sbjct: 244 AISIFSRLKRSGISPDLVAYNSMINVFGKAKLFREARLLLPEMRAGGVMPDTVSYSTLLS 303
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
Y + + + VF + + L T N MI YG+ + +A+ +F M M P
Sbjct: 304 MYVENGKYVEALSVFSEMNEVRCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEP 363
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
++Y ++ +YG + A +F + + + V T N M++ Y + +A L
Sbjct: 364 GIVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLV 423
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ N G+ P++ TY + + KA + L +++ +GI
Sbjct: 424 QEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGI 466
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 134/262 (51%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P++ YN+++R +A+ + + LF+E+ + LAPD YTY+ ++ +GK GM S
Sbjct: 153 PSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTYSTLITHFGKEGMFDSALSW 212
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L +M+ ++ D++ ++ LI+ K + K +F L S P L +NSMI +GK
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGISPDLVAYNSMINVFGK 272
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
A+L +A + +M A P ++Y +++MY A +F E++++ + ++T
Sbjct: 273 AKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPLDLTT 332
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
N M++ Y + EAD LF + MG+ P +Y L + Y +A + L + M+
Sbjct: 333 CNVMIDVYGQLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQ 392
Query: 458 QNGIVPNKRFFLEALETFSSSL 479
+ I N + ++ + SL
Sbjct: 393 RKDIEQNVVTYNTMIKIYGKSL 414
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 150/334 (44%), Gaps = 9/334 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT YS L+++ + G+ A+ +FSEM C D + N +I + D AK +
Sbjct: 294 DTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPLDLTTCNVMIDVYGQL-DMAKEADRL 352
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+KM G+E P IV+YN LLR +A + LF+ + + ++ TYN ++
Sbjct: 353 FWSMRKM-GIE---PGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 408
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
YGK+ ++ +++ M++ +P+ IT++ +I + K D+ +F+ L S +
Sbjct: 409 IYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGIEI 468
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ +MI+ Y +A L A+ + ++ P I E IT+ + A +F
Sbjct: 469 DQVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRETAITILAGAGRIEEATWVF 524
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ G+ ++ M++ + N T +F+ G PDS+ L+ A K
Sbjct: 525 RQAFDAGEVKDITVFGCMIDLFSRNRKHTNVIEVFDKMRGAGYFPDSNVIALVLNACGKL 584
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
E + K ME+ G V + + L + +
Sbjct: 585 REFEKADAIYKEMEEEGCVFSDEVHFQMLSLYGA 618
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 153/323 (47%), Gaps = 9/323 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++ LI + +G+ + A+ LF+EM G P+ Y +I T + + A+
Sbjct: 162 DAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAV--- 218
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F+KM+ CKPN+VTY+ ++ + + R V+ E+ E + P+++TYN ++
Sbjct: 219 -DVFKKME-QNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVH 276
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ G + E + M P+ +TF +L+D K + VF+++ +P
Sbjct: 277 GFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEP 336
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRARE 381
+ T+N+++ Y RL +A+ VF+ M P +Y +I GYC + + A+
Sbjct: 337 DISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILIN--GYCKSRRMDEAKS 394
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ E+ + T + +++ C G P EA LF+ + G P+ TY +L +
Sbjct: 395 LLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFC 454
Query: 442 KANMKELVQKLLKRMEQNGIVPN 464
K + KLLK M++ + PN
Sbjct: 455 KHGHLDEALKLLKSMKEKKLEPN 477
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 170/356 (47%), Gaps = 14/356 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L K + +E+F M K R + + Y+ +I + K G T +A+ +F +M +
Sbjct: 169 LINGLCNEGKIKEAVELFNEMVK-RGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQN 227
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQA 233
GC+P+ Y+ +I + K + + A+ + +M +ER PN+ TYN ++
Sbjct: 228 GCKPNVVTYSTIIDSLC----KDRLVNDAMEFLSEM--VERGIPPNVFTYNSIVHGFCNL 281
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+++ LFKE+ + P+ T+ ++D K GM+ E V M +PDI T+
Sbjct: 282 GQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTY 341
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N L+D Y ++ ++ ++VF+ ++ P ++N +I Y K+R +A+ + +M
Sbjct: 342 NALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYH 401
Query: 354 MKYTPSFITYECIITMYGYCDNVSRARE---IFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
P +TY + M G C + R +E +F E+ G + T +L+ +C +G
Sbjct: 402 KALNPDTVTYSTL--MQGLC-QLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGH 458
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
EA L ++ + P+ Y +L + A E+ ++L ++ +G P+ R
Sbjct: 459 LDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIR 514
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 157/353 (44%), Gaps = 20/353 (5%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L K+ ++VF+ M+ Q + YS +I + K AM SEM G P
Sbjct: 208 LCKTGNTSMAVDVFKKME-QNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPP 266
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
+ YN+++ H L +A F++M G + PN VT+ IL+ + V +
Sbjct: 267 NVFTYNSIV----HGFCNLGQLNEATRLFKEMVGRD-VMPNTVTFTILVDGLCKEGMVSE 321
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+F+ + E + PDI TYN +MD Y ++ E + V M C P ++N+LI+
Sbjct: 322 ARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILIN 381
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
Y K + D+ + + + H P T+++++ + +A +F++M + P
Sbjct: 382 GYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHP 441
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA-------MLEAYCMNGLP 411
+ +TY +I + G+C + DE KL K MK L ++E + G
Sbjct: 442 NLVTY--VILLDGFCKHGH-----LDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKL 494
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A LF G PD TY ++ K K + + L ++ME +G +PN
Sbjct: 495 EVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPN 547
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 147/329 (44%), Gaps = 13/329 (3%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
LI + + ++ + +M G PD +NALI L K K +A+ F +M
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALING-LCNEGKIK---EAVELFNEM 189
Query: 211 --KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
+G E PN+++Y ++ + N +FK++ ++ P++ TY+ ++D+ K+
Sbjct: 190 VKRGHE---PNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKD 246
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
++ + LS M P++ T+N ++ + ++ ++FK ++ P TF
Sbjct: 247 RLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTF 306
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDEL 386
++ K + +A VF+ MT P TY + M GYC ++ A+++F+ +
Sbjct: 307 TILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNAL--MDGYCLQRLMNEAKKVFEIM 364
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
+ G + N ++ YC + EA L ++ + PD+ TY L + +
Sbjct: 365 IRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRP 424
Query: 447 ELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ L K M G PN ++ L+ F
Sbjct: 425 KEALNLFKEMCSYGPHPNLVTYVILLDGF 453
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 130/289 (44%), Gaps = 20/289 (6%)
Query: 191 LHTRDKAKALAKALGYFQKMK------------GMERCKPNIVTYNILLRACAQARNVDQ 238
++ R K LG F K K + R N+ + NIL+ + +VD
Sbjct: 87 INPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDF 146
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
++ ++ + + PD T+N +++ G IKE + + M +P++I++ +I+
Sbjct: 147 SVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVIN 206
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
K VFK + + KP + T++++I + K RL A +M P
Sbjct: 207 GLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPP 266
Query: 359 SFITYECIITMYGYCD--NVSRAREIFDELSKLGKDM--KVSTLNAMLEAYCMNGLPTEA 414
+ TY I+ +G+C+ ++ A +F E+ +G+D+ T +++ C G+ +EA
Sbjct: 267 NVFTYNSIV--HGFCNLGQLNEATRLFKEM--VGRDVMPNTVTFTILVDGLCKEGMVSEA 322
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
L+FE GV PD STY L Y + +K+ + M + G P
Sbjct: 323 RLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAP 371
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 113/242 (46%), Gaps = 9/242 (3%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALGYFQKMKGMERCKPNIV 221
A +F M GC P YN LI + +R D+AK+L + Y + + P+ V
Sbjct: 357 AKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEM-YHKALN------PDTV 409
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
TY+ L++ Q + LFKE+ P++ TY ++D + K+G + E +L M
Sbjct: 410 TYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSM 469
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
K + +P+I+ + +LI+ + +++F L +P + T+ MI K L
Sbjct: 470 KEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLS 529
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
+A +F+KM + P+ +Y +I + + S A + DE+ + +ST +
Sbjct: 530 DEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQML 589
Query: 402 LE 403
L+
Sbjct: 590 LD 591
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 90/219 (41%), Gaps = 6/219 (2%)
Query: 253 PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
P + + + ++ K + S+ ++M + ++ + N+LI+ + D V
Sbjct: 91 PSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSV 150
Query: 313 FKSLMHSKEKPTLPTFNSMI---INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
+ P TFN++I N GK + +A +F +M + P+ I+Y +I
Sbjct: 151 LGKMFKLGIHPDAITFNALINGLCNEGKIK---EAVELFNEMVKRGHEPNVISYTTVING 207
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
N S A ++F ++ + G V T + ++++ C + L +A G+ P+
Sbjct: 208 LCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPN 267
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
TY + + +L K M ++PN F
Sbjct: 268 VFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTF 306
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 61/152 (40%)
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGY 372
F ++ +P++ F + ++ K + + +M + T + + +I
Sbjct: 81 FYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCR 140
Query: 373 CDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
++V + + ++ KLG T NA++ C G EA LF G P+ +
Sbjct: 141 LNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVIS 200
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y + K + + K+MEQNG PN
Sbjct: 201 YTTVINGLCKTGNTSMAVDVFKKMEQNGCKPN 232
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 160/340 (47%), Gaps = 13/340 (3%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
V++ M ++R + + + +I + K G+ + A + +M+ G P YN +I +
Sbjct: 216 VYKEMIRRRIGV-NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGY 274
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
KA + KA ++M +R PN +T+NIL+ + NV +F+E+
Sbjct: 275 C----KAGKMFKADALLKEMVA-KRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQG 329
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
L P++ TYN +++ NG + E + +M KP+++T+N LI+ + K++ +
Sbjct: 330 LQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAR 389
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
++ + P + TFN++I YGKA A + M P+ TY C+I
Sbjct: 390 EMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIV-- 447
Query: 371 GYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM---G 425
G+C NV AR++ E+ G + T N +++A C G +A L + M G
Sbjct: 448 GFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKG 507
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+ TY +L K + E +LL M + G++PN+
Sbjct: 508 RRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNR 547
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 157/325 (48%), Gaps = 11/325 (3%)
Query: 140 WYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKA 199
W A++ I L+ K G+ LA+ F + G R N ++ + + K
Sbjct: 154 WGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLV----KEGR 209
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
+ +++M R N+VT+++++ + + + +++ +P + TYN
Sbjct: 210 IGVVESVYKEMI-RRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYN 268
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
++D Y K G + + +++L M + + P+ ITFN+LID + + + ++VF+ +
Sbjct: 269 TIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQ 328
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VS 377
+P + T+NS+I +A + KM+ M P+ +TY +I G+C +
Sbjct: 329 GLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALIN--GFCKKKMLK 386
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
ARE+ D++ K G V T N +++AY G +A LL + GV P+ STY L
Sbjct: 387 EAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446
Query: 438 KAYTK-ANMKELVQKLLKRMEQNGI 461
+ + N+KE +KL K ME NG+
Sbjct: 447 VGFCREGNVKE-ARKLAKEMEGNGL 470
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 110/214 (51%), Gaps = 4/214 (1%)
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K G I +ESV M + +++TF+++I+ K F K V + + P++
Sbjct: 206 KEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVI 265
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFD 384
T+N++I Y KA KA+ + ++M A + P+ IT+ +I G+C +NV+ A+++F+
Sbjct: 266 TYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILID--GFCRDENVTAAKKVFE 323
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E+ + G V T N+++ C NG EA L + MG+ P+ TY L + K
Sbjct: 324 EMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKK 383
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
M + +++L + + G+ PN F ++ + +
Sbjct: 384 MLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKA 417
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 157/356 (44%), Gaps = 34/356 (9%)
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGK-KGQTRLAMWLFSEMRNS---------------- 174
F+W QK+ I + + +L+ ++ K ++ L S +N+
Sbjct: 94 FKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGS 153
Query: 175 -GCRPDPSVYNALITAHLHTRDKAKALA---KALGYFQKMKGMERCKPNIVTYNILLRAC 230
GC + + + L+ A++ + AL +A Y ++ + C P +V+
Sbjct: 154 WGC-ANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALS-CNPMLVSL------- 204
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
+ + V +++KE+ + ++ T++ V++ K G ++ V+ MK+ P +
Sbjct: 205 VKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSV 264
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
IT+N +ID Y K K + + K ++ + P TFN +I + + A+ VF++
Sbjct: 265 ITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEE 324
Query: 351 MTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
M P+ +TY +I G C N + A + D++S +G V T NA++ +C
Sbjct: 325 MQRQGLQPNVVTYNSLIN--GLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKK 382
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ EA + ++ G+ P+ T+ L AY KA + L M G+ PN
Sbjct: 383 KMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPN 438
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 12/148 (8%)
Query: 139 RWYIADTGI------YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH 192
R + DTG+ Y+ LI ++G + A L EM +G + D YN L+ A
Sbjct: 427 RSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALC- 485
Query: 193 TRDKAKALAKALGYFQKMKGMERC--KPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
K KA+ +M ME+ + NIVTYN+L++ +++ N L E+ E
Sbjct: 486 ---KKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKG 542
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVL 278
L P+ TY+ + D + G I +++ L
Sbjct: 543 LIPNRTTYDILRDEMMEKGFIPDIDGHL 570
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 162/352 (46%), Gaps = 45/352 (12%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L K + +++F M K Y D YS +I + K G T +A+ L +M
Sbjct: 53 LLNGLSSKAKIIDAVKLFDEMVKM-GYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEK 111
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQ 232
GC+P+ VY+ +I + K K + +A+ + +M +G+ PN+VTY+ +L
Sbjct: 112 GCKPNVVVYSTIIDSLC----KDKLITEAMEFLSEMVNRGI---SPNVVTYSSILHGFCN 164
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
++ +LFK++ E + PD T+N ++D K GMI E + V M +P++ T
Sbjct: 165 LGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNT 224
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N L+D Y + D+ +++F ++ P++ ++N +I + K+ +A+ + +M+
Sbjct: 225 YNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMS 284
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
TP +TY + +++ +C +G P
Sbjct: 285 HKALTPDTVTY-----------------------------------STLMKGFCQDGRPQ 309
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+A L E + G+ PD TY ++ K + +LLK M+++ I PN
Sbjct: 310 DAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPN 361
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 158/348 (45%), Gaps = 56/348 (16%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
F LG+S+ + +F+ M +R + DT ++ L+ + K+G A +F M G
Sbjct: 162 FCNLGRSN---EATSLFKQM-VERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKG 217
Query: 176 CRPDPSVYNALITAHLHTR--DKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACA 231
P+ + YNAL+ + D+A+ L F M KG C P++ +YNIL++
Sbjct: 218 VEPNVNTYNALMDGYCSQSQMDEAQKL------FNIMVRKG---CAPSVRSYNILIKGHC 268
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
++ +D+ L E+ L PD TY+ +M + ++G ++ + +L M+S PD++
Sbjct: 269 KSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLM 328
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
T+++++D K+ D+ ++ K++ SK +P + + +I QG F K+
Sbjct: 329 TYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILI--------QGMCN--FGKL 378
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
A ARE+F L G V T M+ GL
Sbjct: 379 EA-------------------------ARELFSNLFVKGIQPDVVTYTVMISGLLKGGLS 413
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTK----ANMKELVQKLLKR 455
EA LF + G P+S TY ++ + + + +N L+++++ R
Sbjct: 414 NEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGR 461
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 136/296 (45%), Gaps = 7/296 (2%)
Query: 171 MRNSGCRPDPSVYNALITAHLHT-RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA 229
M S RPD LI H+ D LG K+ G++ PN VT++ LL
Sbjct: 1 MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKL-GLQ---PNHVTFSTLLNG 56
Query: 230 CA-QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
+ +A+ +D V LF E+ + PD+ TY+ +++ K G +L +M+ CKP
Sbjct: 57 LSSKAKIIDAVK-LFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKP 115
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
+++ ++ +IDS K + + + +++ P + T++S++ + +A +F
Sbjct: 116 NVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLF 175
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
++M P +T+ ++ + A+ +F+ + + G + V+T NA+++ YC
Sbjct: 176 KQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQ 235
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA LF G P +Y +L K + K+ + + LL M + P+
Sbjct: 236 SQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPD 291
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 122/290 (42%), Gaps = 10/290 (3%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K L+ VF M ++ + Y+ L+ + Q A LF+ M
Sbjct: 192 ILVDGLSKEGMILEAQCVFETM-IEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVR 250
Query: 174 SGCRPDPSVYNALITAHLHTR--DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
GC P YN LI H + D+AK L + + + P+ VTY+ L++
Sbjct: 251 KGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSH-------KALTPDTVTYSTLMKGFC 303
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
Q L +E+ L PD+ TY+ V+D K G + E +L M+ ++ +P+I
Sbjct: 304 QDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIF 363
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
+ +LI + ++F +L +P + T+ MI K L +A +F+ M
Sbjct: 364 IYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDM 423
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
P+ TY II + + S A + +E+ G ST +
Sbjct: 424 AVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQML 473
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 114/256 (44%), Gaps = 10/256 (3%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESI---LAPDIYTYNGVMDAYGKNGMIKE 273
+P++ T IL+ C N D + F L L P+ T++ +++ I +
Sbjct: 7 RPDVYTLTILIN-CFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIID 65
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
+ M +PD+IT++ +I+ K + Q+ K + KP + ++++I
Sbjct: 66 AVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIID 125
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE---IFDELSKLG 390
+ K +L +A +M +P+ +TY I ++G+C N+ R+ E +F ++ +
Sbjct: 126 SLCKDKLITEAMEFLSEMVNRGISPNVVTYSSI--LHGFC-NLGRSNEATSLFKQMVERN 182
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
T N +++ G+ EA +FE GV P+ +TY L Y + + Q
Sbjct: 183 VMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQ 242
Query: 451 KLLKRMEQNGIVPNKR 466
KL M + G P+ R
Sbjct: 243 KLFNIMVRKGCAPSVR 258
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 97/227 (42%), Gaps = 2/227 (0%)
Query: 253 PDIYTYNGVMDAY--GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
PD+YT +++ + + SVL M +P+ +TF+ L++ +
Sbjct: 8 PDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAV 67
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
++F ++ +P + T++++I K A + +KM P+ + Y II
Sbjct: 68 KLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSL 127
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
++ A E E+ G V T +++L +C G EA LF+ V PD+
Sbjct: 128 CKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDT 187
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
T+ +L +K M Q + + M + G+ PN + ++ + S
Sbjct: 188 VTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCS 234
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 151/328 (46%), Gaps = 18/328 (5%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y LI + K G T A+ L M C+P+ YN +I + K + + +A
Sbjct: 132 DVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLC----KDRQVTEA 187
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
F +M KG+ P+I TYN L+ A V L E+ +S + PD+ ++N V
Sbjct: 188 FNLFSEMVTKGIS---PDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTV 244
Query: 262 MDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
+DA K G + E V+ +M + C P++I++N LI+ Y K Q DK +F + +
Sbjct: 245 VDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQE 304
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSR 378
P T++++I A +F +M A P+ +TY I + C N ++
Sbjct: 305 LIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYR--ILLDYLCKNRYLAE 362
Query: 379 AREIFD--ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
A + E S L D++V+ N ++ C G A LF N + G+ PD TY ++
Sbjct: 363 AMALLKAIEGSNLDPDIQVN--NIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIM 420
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ + + KL + M++NG N
Sbjct: 421 INGLCRRGLLDEASKLFREMDENGCTLN 448
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 118/268 (44%), Gaps = 6/268 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEM-RNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
D ++ ++ + K+G+ A + +M + GC P+ YN LI + K + + K
Sbjct: 237 DVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYC----KIQRIDK 292
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A+ F +M E P+ VTY+ L+ + ALF E+ P++ TY ++
Sbjct: 293 AMYLFGEMCRQELI-PDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILL 351
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D KN + E ++L ++ + PDI N+ ID + + +F +L +
Sbjct: 352 DYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQ 411
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P + T++ MI + L +A +F++M T + Y I + + SRA ++
Sbjct: 412 PDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQL 471
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGL 410
E+ G ST+ ++ +GL
Sbjct: 472 LQEMVARGFSADASTMTLFVKMLSDDGL 499
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 139/309 (44%), Gaps = 20/309 (6%)
Query: 171 MRNSGCRPDPSVYNALITAHL---HTRDKAKALA-----KALGYFQKMKGMERCKPNIVT 222
MR RP + +L+ L H R +K+L A+ F +M M+ P+ V
Sbjct: 5 MRRPSSRPSGTQMLSLLAHFLSLSHNRFHSKSLHFNTIDGAISSFNRMLRMQP-PPSTVD 63
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG--KNGMIKEMESVLSR 280
+N LL + A+ ++ + +L ++ + P+IYT + +++++ G I E + +
Sbjct: 64 FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDK 123
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
M +PD++T+ LI+ K ++ S++ +P + +N++I + K R
Sbjct: 124 MIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQ 183
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS--RAREIFDEL--SKLGKDMKVS 396
+A +F +M +P TY +I + C+ + +E+ SK+ D V
Sbjct: 184 VTEAFNLFSEMVTKGISPDIFTYNSLI--HALCNLCEWKHVATLLNEMVDSKIMPD--VV 239
Query: 397 TLNAMLEAYCMNGLPTEA-DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+ N +++A C G TEA D++ + G P+ +Y L Y K + L
Sbjct: 240 SFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGE 299
Query: 456 MEQNGIVPN 464
M + ++P+
Sbjct: 300 MCRQELIPD 308
Score = 38.5 bits (88), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 13/156 (8%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIV 221
AM L + S PD V N I +A L A F + KG++ P++
Sbjct: 363 AMALLKAIEGSNLDPDIQVNNIAIDGMC----RAGELEAARDLFSNLSSKGLQ---PDVW 415
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
TY+I++ + +D+ + LF+E+ E+ + YN + + +N +L M
Sbjct: 416 TYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEM 475
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
+ D T L + K + D ++Q K ++
Sbjct: 476 VARGFSADASTMTLFV----KMLSDDGLDQSLKQIL 507
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 157/355 (44%), Gaps = 13/355 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
LF GK D + L R + D IY+ +I + G A+ + EM
Sbjct: 305 LFARRGKMDHAMAYLREMRCFG----LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGC 360
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQA 233
GC PD YN L+ K + L A G +M+ ER P++ T+ L+
Sbjct: 361 GCLPDVVTYNTLLNGLC----KERRLLDAEGLLNEMR--ERGVPPDLCTFTTLIHGYCIE 414
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+D+ LF + L PDI TYN ++D + G + + + M S + P+ +T+
Sbjct: 415 GKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTY 474
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
++LIDS+ ++ + +++ P + T+NS+I Y ++ K + QKM
Sbjct: 475 SILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMV 534
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
K +P ITY +I Y D + A ++ + + K V T N ++ + ++G E
Sbjct: 535 NKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQE 594
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAY-TKANMKELVQKLLKRMEQNGIVPNKRF 467
A +FE G+ PD TY + + T N KE Q L M Q G P+ +F
Sbjct: 595 AGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQ-LHDEMLQRGFAPDDKF 648
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 162/352 (46%), Gaps = 18/352 (5%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ L++++ M + R D +S LI + ++G+ AM EMR G PD +Y +
Sbjct: 279 EALKIYKEM-RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 337
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I +A ++ AL +M G C P++VTYN LL + R + L E+
Sbjct: 338 IGGFC----RAGLMSDALRVRDEMVGCG-CLPDVVTYNTLLNGLCKERRLLDAEGLLNEM 392
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
E + PD+ T+ ++ Y G + + + M + + +PDI+T+N LID ++
Sbjct: 393 RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDL 452
Query: 307 DKMEQVFKSLMHSKEK-PTLPTFNSMIINYGKARLQGKAEYVF---QKMTAMKYTPSFIT 362
DK ++ MHS+E P T++ +I ++ + +G+ E F +M P+ +T
Sbjct: 453 DKANDLWDD-MHSREIFPNHVTYSILIDSHCE---KGQVEDAFGFLDEMINKGILPNIMT 508
Query: 363 YECIITMYGYCDNVSRAREIFDEL--SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
Y II Y NVS+ ++ ++ +K+ D+ T N ++ Y +A L
Sbjct: 509 YNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDL--ITYNTLIHGYIKEDKMHDAFKLLNM 566
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
V PD TY +L ++ + + ++M GI P++ ++ +
Sbjct: 567 MEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 618
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 140/314 (44%), Gaps = 14/314 (4%)
Query: 158 KGQTRLAMW-----LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKG 212
KG R MW +F EM + G PD + LI + + +AL +++M+
Sbjct: 234 KGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC----RVGEIEEALKIYKEMR- 288
Query: 213 MERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIK 272
KP++V+++ L+ A+ +D A +E+ L PD Y V+ + + G++
Sbjct: 289 HRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMS 348
Query: 273 EMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
+ V M C PD++T+N L++ K + E + + P L TF ++I
Sbjct: 349 DALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLI 408
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLG 390
Y KA +F M + P +TY +I G C ++ +A +++D++
Sbjct: 409 HGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLID--GMCRQGDLDKANDLWDDMHSRE 466
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
T + +++++C G +A + N G+ P+ TY + K Y ++ Q
Sbjct: 467 IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQ 526
Query: 451 KLLKRMEQNGIVPN 464
K L++M N + P+
Sbjct: 527 KFLQKMMVNKVSPD 540
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 108/251 (43%), Gaps = 3/251 (1%)
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCK-PNIVTYNILLRACAQARNVDQVNALFKELHES 249
+H KA K +M+ +RC P++VT+N+++ A +A + + AL +
Sbjct: 163 VHNYCKALEFDKVDAVISEME--KRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSK 220
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
L P I TYN V+ ++GM + V M PD+ +F +LI + + ++
Sbjct: 221 GLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEA 280
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
+++K + H KP L +F+ +I + + A ++M P + Y +I
Sbjct: 281 LKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGG 340
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
+ +S A + DE+ G V T N +L C +A+ L GV PD
Sbjct: 341 FCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPD 400
Query: 430 SSTYKLLYKAY 440
T+ L Y
Sbjct: 401 LCTFTTLIHGY 411
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/209 (19%), Positives = 92/209 (44%)
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
YT N ++ Y K ++++V+S M+ PD++T N+++D+ + + + S
Sbjct: 157 YTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDS 216
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
++ KP + T+NS++ ++ + KA VF++M P ++ +I +
Sbjct: 217 MVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGE 276
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+ A +I+ E+ G + + + ++ + G A G+ PD Y +
Sbjct: 277 IEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTM 336
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ + +A + ++ M G +P+
Sbjct: 337 VIGGFCRAGLMSDALRVRDEMVGCGCLPD 365
>gi|242086476|ref|XP_002443663.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
gi|241944356|gb|EES17501.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
Length = 853
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 157/320 (49%), Gaps = 10/320 (3%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L F+W+++Q + D Y+ +I ++G+ Q + L EM + C+P YN +I
Sbjct: 344 LGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVLKKLLDEMSRAHCKPTVVTYNRII- 402
Query: 189 AHLHTRDKAKALAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
H +A L +A+ F++M+ G E P+ VTY L+ A+A +D L+ +
Sbjct: 403 ---HAYGRANYLKEAVKVFEEMQEAGYE---PDRVTYCTLIDIHAKAGYLDIAMDLYGRM 456
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
E L+PD +TY+ +++ GK G + + M N C P+++T+N++I K + +
Sbjct: 457 QEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNY 516
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ + +++K + + +P T++ ++ G +AE VF +M + P Y +
Sbjct: 517 ENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR-RDWAPDEPVYGLL 575
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
+ ++G NV +A + + + G V T N++L A+ +A ++ +N G+
Sbjct: 576 VDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYIVLQNMLAQGL 635
Query: 427 TPDSSTYKLLYKAYTKANMK 446
P TY LL T+A +
Sbjct: 636 VPSVQTYTLLLSCCTEAQAQ 655
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 157/350 (44%), Gaps = 42/350 (12%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ G+++ + ++VF MQ + Y D Y LI + K G +AM L+ M+
Sbjct: 401 IIHAYGRANYLKEAVKVFEEMQ-EAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEV 459
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQA 233
G PD Y+A++ K LA A F +M +E C PN+VTYNI++ A+A
Sbjct: 460 GLSPDTFTYSAMVNC----LGKGGQLAAAYKLFCEM--IENGCTPNLVTYNIMIALQAKA 513
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
RN + V L+K++ + PD TY+ VM+ G G + E E+V M+ + PD +
Sbjct: 514 RNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRRDWA-PDEPVY 572
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
LL+D +GK DK +++++ +P +PT NS++ + K A V Q M A
Sbjct: 573 GLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYIVLQNMLA 632
Query: 354 MKYTPSFITYECIIT-------MYGYC-------------------------DNVSRARE 381
PS TY +++ G C NV
Sbjct: 633 QGLVPSVQTYTLLLSCCTEAQAQMGLCGQLMAITGHPAHMFLLYLPDAEPGGQNVRDHTG 692
Query: 382 IF-DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
F D + ++ K ++A+++ +GL EA L++E + V PDS
Sbjct: 693 YFLDMMHSEDRESKRGLMDAVIDFLHKSGLKEEAGLIWEVAAQKNVYPDS 742
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 120/269 (44%), Gaps = 15/269 (5%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
ALG+FQ +K K + TY ++ QAR + L E+ + P + TYN ++
Sbjct: 343 ALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVLKKLLDEMSRAHCKPTVVTYNRII 402
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
AYG+ +KE V M+ +PD +T+ LID + K D ++ +
Sbjct: 403 HAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGLS 462
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P T+++M+ GK A +F +M TP+ +TY +I + ++AR
Sbjct: 463 PDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQ------AKARN- 515
Query: 383 FDELSKLGKDMKVS-------TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
++ + KL KDM+V+ T + ++E G EA+ +F PD Y L
Sbjct: 516 YENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRR-DWAPDEPVYGL 574
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L + KA + + M Q+G+ PN
Sbjct: 575 LVDLWGKAGNVDKALGWYQAMLQDGLQPN 603
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 87/190 (45%)
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
K D T+ +I G+ + F ++++ + + KPT+ T+N +I YG+A +A
Sbjct: 357 KHDGHTYTTMIGILGQARQFGVLKKLLDEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVK 416
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
VF++M Y P +TY +I ++ + A +++ + ++G T +AM+
Sbjct: 417 VFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYSAMVNCLG 476
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
G A LF G TP+ TY ++ KA E V KL K M+ G P+K
Sbjct: 477 KGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKI 536
Query: 467 FFLEALETFS 476
+ +E
Sbjct: 537 TYSIVMEVLG 546
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 164/386 (42%), Gaps = 41/386 (10%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + L K+ L+V + + +R D +Y+ I + + G+ A EMRN+
Sbjct: 545 LMDGLFKTGNMPAALKVGQELM-ERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNT 603
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G PD + YN +I+A + +KAL +MK KPN++TY L+ +A
Sbjct: 604 GLEPDQATYNTMISAQCREGNTSKALK----LLNEMK-WSSIKPNLITYTTLVVGLLEAG 658
Query: 235 NVDQVNALFKELHESILAP-----------------------------------DIYTYN 259
V++ L E+ + P DI YN
Sbjct: 659 VVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYN 718
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
++ +GM ++ VL M PD ITFN LI + K D + ++H
Sbjct: 719 TLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQ 778
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
P + TFN+++ A G+A+ V +M M P+ +TY+ ++T Y N A
Sbjct: 779 GLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEA 838
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
++ E+ G K ST N+++ + G+ +A LF GV SSTY +L
Sbjct: 839 LRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNG 898
Query: 440 YTKANMKELVQKLLKRMEQNGIVPNK 465
++K V+ LLK M++ G P+K
Sbjct: 899 WSKLRNGTEVRILLKDMKELGFKPSK 924
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 141/313 (45%), Gaps = 6/313 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ LI K + A L+ M SG PD +AL+ RD + A AL F
Sbjct: 262 HTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGL--CRDGRFSEAYAL--F 317
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M + PN VTY + + A+ + V++ L E+ +A D+ Y VMD GK
Sbjct: 318 REMDKIG-VAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGK 376
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G I+E + VL S+ P+ +T+ +L+D++ + D EQ+ + P + T
Sbjct: 377 EGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVT 436
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
F+S++ K KA +KM P+ +TY +I + C A +++ ++
Sbjct: 437 FSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDML 496
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA-YTKANMK 446
G + +++++ NG EA+ LF++ G+ D Y L + NM
Sbjct: 497 HEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMP 556
Query: 447 ELVQKLLKRMEQN 459
++ + ME+N
Sbjct: 557 AALKVGQELMERN 569
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 162/395 (41%), Gaps = 31/395 (7%)
Query: 94 EPLVRT----LNKYVKVVRSEHCFLLFEELGKS-------------------DKWLQCLE 130
EP V T + +Y K+ R E F L+E + +S ++ +
Sbjct: 256 EPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYA 315
Query: 131 VFRWMQKQRWYIADTGI-YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
+FR M K +A + Y I + K + ++ L EM + G D +Y ++
Sbjct: 316 LFREMDK--IGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMD- 372
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
L K + L + + PN VTY +L+ A +A N+D + ++ E
Sbjct: 373 RLGKEGKIEEAKDVLRHALS----DNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEK 428
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
++P++ T++ +++ K G I + + +MK + P+++T+ LID + K Q +
Sbjct: 429 SVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAA 488
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
V++ ++H + +S++ K +AE +F+ M + Y ++
Sbjct: 489 LDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDG 548
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
N+ A ++ EL + N + C G +EA + N G+ PD
Sbjct: 549 LFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPD 608
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+TY + A + KLL M+ + I PN
Sbjct: 609 QATYNTMISAQCREGNTSKALKLLNEMKWSSIKPN 643
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 156/346 (45%), Gaps = 14/346 (4%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--D 195
Q ADT Y+ +A + ++G RLA + SEM G D + + T
Sbjct: 110 QPQVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVG 169
Query: 196 KAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
+A ALA+ L + + G+ +V +N L+ + +++ A+ + + L+ D+
Sbjct: 170 EAAALAEMLVRGRGIDGL-----GVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDV 224
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
YN ++ + +G V RMK++ +P ++T LI Y K + ++ +++
Sbjct: 225 VGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEG 284
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
++ S P + T ++++ + +A +F++M + P+ +TY I
Sbjct: 285 MVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQR 344
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
V+ + + E+ G M + +++ G EA + ++ + +TP+ TY +
Sbjct: 345 VNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTV 404
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
L A+ +A + +++L +ME+ + PN + TFSS L G
Sbjct: 405 LVDAHCRAGNIDGAEQMLLQMEEKSVSPN-------VVTFSSILNG 443
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 158/376 (42%), Gaps = 55/376 (14%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+S ++ + K+G A +M++SG P+ Y LI K + AL +
Sbjct: 437 FSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFF----KCQGQEAALDVY 492
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK----------------------- 244
+ M E + N + L+ + N+++ ALFK
Sbjct: 493 RDML-HEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFK 551
Query: 245 ------------ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
EL E L+PD YN ++ + G E +S L M++ +PD T
Sbjct: 552 TGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQAT 611
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N +I + + K ++ + S KP L T+ ++++ +A + KA+Y+ +M
Sbjct: 612 YNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMA 671
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL----GKDMKVSTLNAMLEAYCMN 408
+ +TP+ +TY ++ C SR+ + E+ +L G ++ N ++ C +
Sbjct: 672 SAGFTPTPLTYRRVLQA---CSG-SRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCH 727
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G+ +A ++ + G+ PD+ T+ L + K++ + +M G+ PN
Sbjct: 728 GMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPN---- 783
Query: 469 LEALETFSSSLAGSQS 484
+ TF++ L G +S
Sbjct: 784 ---IATFNTLLGGLES 796
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 123/252 (48%), Gaps = 11/252 (4%)
Query: 171 MRNSGCRPDPSVYNALI---TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
M +G D +VYN L+ H TR L + LG +G+ P+ +T+N L+
Sbjct: 705 MMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLG-----RGI---APDTITFNALI 756
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
++ ++D A + ++ L+P+I T+N ++ G I E ++V+ MK +
Sbjct: 757 LGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLE 816
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P+ +T+++L+ Y K+ + +++ ++ P T+NS+I ++ KA + +A+ +
Sbjct: 817 PNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKEL 876
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F +M + TY+ ++ + N + R + ++ +LG T+++M A+
Sbjct: 877 FSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSK 936
Query: 408 NGLPTEADLLFE 419
G+ EA L +
Sbjct: 937 PGMTWEARRLLK 948
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 143/337 (42%), Gaps = 9/337 (2%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
G + K L+ L +W + I Y+ L+ + + G A +L +EM ++G P
Sbjct: 623 GNTSKALKLLNEMKWSSIKPNLIT----YTTLVVGLLEAGVVEKAKYLLNEMASAGFTPT 678
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQV 239
P Y ++ A +R L + M G +I YN L+ +
Sbjct: 679 PLTYRRVLQACSGSRSPYVILE----VHELMMG-AGLHADITVYNTLVHVLCCHGMTRKA 733
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
+ E+ +APD T+N ++ + K+ + + ++M P+I TFN L+
Sbjct: 734 TIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGG 793
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
+ + V + +P T++ ++ Y K + +A ++ +M + + P
Sbjct: 794 LESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPK 853
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
TY +I+ + +++A+E+F E+ + G ST + +L + TE +L +
Sbjct: 854 ASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLK 913
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
+ +G P T + +A++K M ++LLK +
Sbjct: 914 DMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTL 950
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 149/346 (43%), Gaps = 15/346 (4%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA--HLHTRD 195
+R + D Y+ L+ + K G A+ + E+ PD VYN I L
Sbjct: 532 ERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFS 591
Query: 196 KAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
+AK+ K + + G+E P+ TYN ++ A + N + L E+ S + P++
Sbjct: 592 EAKSFLKEM----RNTGLE---PDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNL 644
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS-YGKRQAFDKMEQVFK 314
TY ++ + G++++ + +L+ M S P +T+ ++ + G R + +E V +
Sbjct: 645 ITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILE-VHE 703
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC- 373
+M + + +N+++ + KA V +M P IT+ +I G+C
Sbjct: 704 LMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALI--LGHCK 761
Query: 374 -DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
++ A + ++ G ++T N +L G EAD + MG+ P++ T
Sbjct: 762 SSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLT 821
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
Y +L Y K + K +L M G +P + + F+ +
Sbjct: 822 YDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKA 867
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/309 (19%), Positives = 132/309 (42%), Gaps = 6/309 (1%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ + M G D YN L+ ++ D A A ++MK + +P++VT+
Sbjct: 208 ALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVA----ERMKA-DGVEPSVVTH 262
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
L+ + + +++ L++ + S + PD+ T + ++D ++G E ++ M
Sbjct: 263 TTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDK 322
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
P+ +T+ IDS K Q ++ + ++ L + +++ GK +
Sbjct: 323 IGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEE 382
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A+ V + + TP+ +TY ++ + N+ A ++ ++ + V T +++L
Sbjct: 383 AKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILN 442
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
G +A + G+ P+ TY L + K +E + + M G+
Sbjct: 443 GLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEA 502
Query: 464 NKRFFLEAL 472
N F +++L
Sbjct: 503 NN-FIVDSL 510
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 160/369 (43%), Gaps = 31/369 (8%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E F M +Q + DT +Y+ LI K+G R A F EM + PD Y A+I+
Sbjct: 780 EAFSEMIRQG-ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 838
Query: 190 HLHTRDKAKA-------LAKAL------------GYFQ--KMKGMER---------CKPN 219
D +A K L GY + MK R C PN
Sbjct: 839 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 898
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+VTY L+ + ++D N L E+ + L P+I+TYN +++ K+G I+E ++
Sbjct: 899 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 958
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
++ D +T+ L+D+Y K DK +++ K ++ +PT+ TFN ++ +
Sbjct: 959 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 1018
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLN 399
+ E + M A P+ T+ ++ Y +N+ A I+ ++ G T
Sbjct: 1019 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 1078
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
+++ +C EA LF+ G + STY +L K + K +++ +M +
Sbjct: 1079 NLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 1138
Query: 460 GIVPNKRFF 468
G+ +K F
Sbjct: 1139 GLAADKEIF 1147
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 157/348 (45%), Gaps = 9/348 (2%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
G+ DK + +EV K++ ++ IY +I ++ + + A FSEM G P
Sbjct: 737 FGELDKVWKLIEV----MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 792
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
D VY LI R +A +K +F +M + P+++TY ++ Q ++ +
Sbjct: 793 DTVVYTTLIDGFCK-RGDIRAASK---FFYEMHSRD-ITPDVLTYTAIISGFCQIGDMVE 847
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
LF E+ L PD T+ +++ Y K G +K+ V + M C P+++T+ LID
Sbjct: 848 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 907
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
K D ++ + +P + T+NS++ K+ +A + + A
Sbjct: 908 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 967
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+TY ++ Y + +A+EI E+ G + T N ++ +C++G+ + + L
Sbjct: 968 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 1027
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
G+ P+++T+ L K Y N + + K M G+ P+ +
Sbjct: 1028 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 1075
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 134/342 (39%), Gaps = 46/342 (13%)
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
+T A+ +F E G + + YN +I H + A L ++KG P+
Sbjct: 669 KTATAIIVFREFPEVGVCWNVASYNIVI--HFVCQLGRIKEAHHLLLLMELKGY---TPD 723
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+++Y+ ++ + +D+V L + + L P+ Y Y ++ + + E E S
Sbjct: 724 VISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS 783
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE------------------ 321
M PD + + LID + KR + F MHS++
Sbjct: 784 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE-MHSRDITPDVLTYTAIISGFCQI 842
Query: 322 ------------------KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
+P TF +I Y KA A V M +P+ +TY
Sbjct: 843 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 902
Query: 364 ECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
+I G C ++ A E+ E+ K+G + T N+++ C +G EA L
Sbjct: 903 TTLID--GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 960
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
G+ D+ TY L AY K+ + Q++LK M G+ P
Sbjct: 961 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 1002
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 147/347 (42%), Gaps = 6/347 (1%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
+L +D ++Q ++ + K + +D ++ V+ G R A +F +M N G
Sbjct: 593 KLNVTDSFVQFFDLLVYTYKD--WGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLV 650
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
N +T ++D K A A+ F++ + C N+ +YNI++ Q +
Sbjct: 651 LSVDSCNVYLTRL--SKDCYKT-ATAIIVFREFPEVGVCW-NVASYNIVIHFVCQLGRIK 706
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ + L + PD+ +Y+ V++ Y + G + ++ ++ MK KP+ + +I
Sbjct: 707 EAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSII 766
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+ + E+ F ++ P + ++I + K A F +M + T
Sbjct: 767 GLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT 826
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P +TY II+ + ++ A ++F E+ G + T ++ YC G +A +
Sbjct: 827 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 886
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ G +P+ TY L K + +LL M + G+ PN
Sbjct: 887 HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 933
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 12/182 (6%)
Query: 296 LIDSYGKRQAF---DKMEQVFKSLMHS-----KEKPTLPTFNSMIINYGKARLQGKAEYV 347
LI S+ +R D Q F L+++ + F +++++G R +A V
Sbjct: 584 LISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLR---EARRV 640
Query: 348 FQKMTAMKYTPSFITYECIIT-MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
F+KM S + +T + C + A +F E ++G V++ N ++ C
Sbjct: 641 FEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVC 700
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
G EA L G TPD +Y + Y + + V KL++ M++ G+ PN
Sbjct: 701 QLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSY 760
Query: 467 FF 468
+
Sbjct: 761 IY 762
>gi|168049914|ref|XP_001777406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671255|gb|EDQ57810.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 154/344 (44%), Gaps = 6/344 (1%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
W L +F+W+Q ++ + + Y+ ++ V+ + Q L+ + +M N+G RPD Y+
Sbjct: 23 WKVALSLFKWLQAEQNFNLNIYTYNVMLKVLRRGQQWELSQQIAEDMINAGIRPDNITYS 82
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
LI+ ++ A+ +F +M + C P+ VTY+ ++ + D+ AL++
Sbjct: 83 TLISC----ANRCNYQDAAMAWFDRMHDAQ-CVPDAVTYSTMIDVYGKVGKYDEAVALYE 137
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
+ +S PD TY ++ +G+ G I S+ MK + +P + +N++I G+
Sbjct: 138 SVKKSGWKPDKVTYGTMVRLFGRAGYISAAVSIFDEMKGSGIQPGSVVYNIMISCLGRAG 197
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
+VF+ + + KP T ++++ Y ++ + +F M I Y
Sbjct: 198 RMGHALKVFQEMKQAGVKPNAVTLSTVMEIYSRSGKVMEGLGIFHHMR-QDLACDIIVYN 256
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
+I M V A + E+ + G T M+ Y NG+ EA +F
Sbjct: 257 AVIKMCREAGLVPEAEQYLREMVEYGHQPNDWTYRNMISLYAKNGMAVEAQRMFSQLVEA 316
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G PD +Y L + Y A E VQ++L M P++R +
Sbjct: 317 GYQPDVMSYTSLLQGYGNAKDYEKVQEILHEMVSANCAPDERLW 360
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 125/269 (46%), Gaps = 5/269 (1%)
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
K+ AL F+ ++ + NI TYN++L+ + + + + +++ + + PD T
Sbjct: 21 KSWKVALSLFKWLQAEQNFNLNIYTYNVMLKVLRRGQQWELSQQIAEDMINAGIRPDNIT 80
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y+ ++ + + RM QC PD +T++ +ID YGK +D+ +++S+
Sbjct: 81 YSTLISCANRCNYQDAAMAWFDRMHDAQCVPDAVTYSTMIDVYGKVGKYDEAVALYESVK 140
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
S KP T+ +M+ +G+A A +F +M P + Y +I+ G +
Sbjct: 141 KSGWKPDKVTYGTMVRLFGRAGYISAAVSIFDEMKGSGIQPGSVVYNIMISCLGRAGRMG 200
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM--GVTPDSSTYKL 435
A ++F E+ + G TL+ ++E Y +G E +F H+M + D Y
Sbjct: 201 HALKVFQEMKQAGVKPNAVTLSTVMEIYSRSGKVMEGLGIF---HHMRQDLACDIIVYNA 257
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ K +A + ++ L+ M + G PN
Sbjct: 258 VIKMCREAGLVPEAEQYLREMVEYGHQPN 286
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 124/260 (47%), Gaps = 7/260 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ + GK K+ + + ++ ++K W D Y ++ + G+ G A+ +F EM+ S
Sbjct: 119 MIDVYGKVGKYDEAVALYESVKKSGWK-PDKVTYGTMVRLFGRAGYISAAVSIFDEMKGS 177
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G +P VYN +I+ +A + AL FQ+MK KPN VT + ++ +++
Sbjct: 178 GIQPGSVVYNIMISC----LGRAGRMGHALKVFQEMK-QAGVKPNAVTLSTVMEIYSRSG 232
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
V + +F + + LA DI YN V+ + G++ E E L M +P+ T+
Sbjct: 233 KVMEGLGIFHHMRQD-LACDIIVYNAVIKMCREAGLVPEAEQYLREMVEYGHQPNDWTYR 291
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+I Y K + +++F L+ + +P + ++ S++ YG A+ K + + +M +
Sbjct: 292 NMISLYAKNGMAVEAQRMFSQLVEAGYQPDVMSYTSLLQGYGNAKDYEKVQEILHEMVSA 351
Query: 355 KYTPSFITYECIITMYGYCD 374
P + I+ + CD
Sbjct: 352 NCAPDERLWCVILNLLDACD 371
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 85/190 (44%)
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
+I T+N+++ + Q ++ +Q+ + ++++ +P T++++I + Q A F
Sbjct: 42 NIYTYNVMLKVLRRGQQWELSQQIAEDMINAGIRPDNITYSTLISCANRCNYQDAAMAWF 101
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
+M + P +TY +I +YG A +++ + K G T M+ +
Sbjct: 102 DRMHDAQCVPDAVTYSTMIDVYGKVGKYDEAVALYESVKKSGWKPDKVTYGTMVRLFGRA 161
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G + A +F+ G+ P S Y ++ +A K+ + M+Q G+ PN
Sbjct: 162 GYISAAVSIFDEMKGSGIQPGSVVYNIMISCLGRAGRMGHALKVFQEMKQAGVKPNAVTL 221
Query: 469 LEALETFSSS 478
+E +S S
Sbjct: 222 STVMEIYSRS 231
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 148/327 (45%), Gaps = 5/327 (1%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
R + D Y+ +IA + K AM + + M +G PD YN++ LH +
Sbjct: 224 DRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSI----LHGYCSS 279
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+A+G+ +KM+ + +P++VTY++L+ + + +F + + L P+I T
Sbjct: 280 GQPKEAIGFLKKMRS-DGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITT 338
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y ++ Y G + EM +L M N PD F++LI +Y + D+ VF +
Sbjct: 339 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMR 398
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
P T+ ++I K+ A F++M +P I Y +I C+
Sbjct: 399 QQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWE 458
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
RA E+ E+ G + N++++++C G E++ LFE +GV P+ TY L
Sbjct: 459 RAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLI 518
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPN 464
Y A + KLL M G+ PN
Sbjct: 519 NGYCLAGKMDEAMKLLSGMVSVGLKPN 545
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 151/321 (47%), Gaps = 5/321 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++S LI +G+ AM +FS+MR G P+ Y A+I K+ + A
Sbjct: 370 DHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILC----KSGRVEDA 425
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ YF++M E P + YN L+ ++ L E+ + + + +N ++D
Sbjct: 426 MLYFEQMID-EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIID 484
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
++ K G + E E + M KP++IT+N LI+ Y D+ ++ ++ KP
Sbjct: 485 SHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKP 544
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T++++I Y K A +F++M + +P ITY I+ + A+E++
Sbjct: 545 NTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELY 604
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+++ G +++ST N +L C N L +A +F+N M + ++ T+ ++ A K
Sbjct: 605 VRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKV 664
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+ + L NG+VPN
Sbjct: 665 GRNDEAKDLFVAFSSNGLVPN 685
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 137/324 (42%), Gaps = 7/324 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y LI + G+ L + G R D + L+ + + A+
Sbjct: 86 DLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 145
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNAL--FKELHESILAPDIYTYNG 260
L ++ C PN+ +YNILL+ C + R+ + + L + PD+ +Y
Sbjct: 146 LRRMTELG----CIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTT 201
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
V++ + K G + S M PD++T+N +I + K QA DK +V +++ +
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNG 261
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P T+NS++ Y + +A +KM + P +TY ++ AR
Sbjct: 262 VMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEAR 321
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+IFD ++K G +++T +L+ Y G E L + G+ PD + +L AY
Sbjct: 322 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAY 381
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
+ + +M Q G+ PN
Sbjct: 382 ANQGKVDQAMLVFSKMRQQGLNPN 405
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 17/299 (5%)
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNV 236
PD Y LI A ALG K KG + + + + LL+ CA R
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFA-ALGNVIK-KGF---RVDAIAFTPLLKGLCADKRTS 139
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ---CKPDIITF 293
D ++ + + + E P++++YN ++ +E +L M ++ PD++++
Sbjct: 140 DAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 199
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+I+ + K DK + ++ P + T+NS+I KA+ KA V M
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVK 259
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL---GKDMKVSTLNAMLEAYCMNGL 410
P +TY I ++GYC + + +E L K+ G + V T + +++ C NG
Sbjct: 260 NGVMPDCMTYNSI--LHGYCSS-GQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGR 316
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAY-TKANMKELVQKLLKRMEQNGIVPNKRFF 468
EA +F++ G+ P+ +TY L + Y TK + E+ LL M +NGI P+ F
Sbjct: 317 CMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEM-HGLLDLMVRNGIHPDHYVF 374
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 155/388 (39%), Gaps = 52/388 (13%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
GK D Q + VF M++Q + Y +I ++ K G+ AM F +M + G P
Sbjct: 385 GKVD---QAMLVFSKMRQQGLN-PNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 440
Query: 180 PSVYNALITAH-------------LHTRDKAKAL---------------AKALGYFQKMK 211
VYN+LI L D+ L + + + +
Sbjct: 441 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFE 500
Query: 212 GMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG 269
M R KPN++TYN L+ A +D+ L + L P+ TY+ +++ Y K
Sbjct: 501 LMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKIS 560
Query: 270 MIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFN 329
+++ + M+S+ PDIIT+N+++ + + ++++ + S + L T+N
Sbjct: 561 RMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYN 620
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
++ K +L A +FQ + M T+ +I A+++F S
Sbjct: 621 IILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSN 680
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
G T M E GL E D LF + + G T DS +V
Sbjct: 681 GLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF------------IV 728
Query: 450 QKLLKRMEQN------GIVPNKRFFLEA 471
++LL+R E ++ K F LEA
Sbjct: 729 RELLQRGEITRAGTYLSMIDEKHFSLEA 756
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 84/198 (42%), Gaps = 22/198 (11%)
Query: 100 LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG 159
+N Y K+ R E +LF+E+ S D Y+ ++ + +
Sbjct: 553 INGYCKISRMEDALVLFKEMESS-----------------GVSPDIITYNIILQGLFQTR 595
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
+T A L+ + SG + + S YN + LH K K AL FQ + M+ K
Sbjct: 596 RTAAAKELYVRITESGTQIELSTYNII----LHGLCKNKLTDDALQMFQNLCLMD-LKLE 650
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
T+NI++ A + D+ LF + L P+ +TY + + G+++E++ +
Sbjct: 651 ARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFL 710
Query: 280 RMKSNQCKPDIITFNLLI 297
M+ N C D N ++
Sbjct: 711 SMEDNGCTVDSGMLNFIV 728
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 88/211 (41%), Gaps = 16/211 (7%)
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY-G 336
++R +++ PD+ T+ +LI + D +++ + F ++
Sbjct: 75 MARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCA 134
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM--- 393
R + V ++MT + P+ +Y I + G CD +R++E + L + D
Sbjct: 135 DKRTSDAMDIVLRRMTELGCIPNVFSYN--ILLKGLCDE-NRSQEALELLHMMADDRGGG 191
Query: 394 ---KVSTLNAMLEAYCMNGLPTEADLLFENSHNM---GVTPDSSTYKLLYKAYTKANMKE 447
V + ++ + G ++D + H M G+ PD TY + A KA +
Sbjct: 192 SPPDVVSYTTVINGFFKEG---DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMD 248
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
++L M +NG++P+ + L + SS
Sbjct: 249 KAMEVLNTMVKNGVMPDCMTYNSILHGYCSS 279
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 154/350 (44%), Gaps = 29/350 (8%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI----------TAHLHT 193
D+ YS LI K + A L EM G P +VYN +I +A +H
Sbjct: 166 DSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHY 225
Query: 194 RDKAKALAKALGYFQKMKGM-------------------ERCKPNIVTYNILLRACAQAR 234
RD + A ++ + + C PN+VTYN L+ +
Sbjct: 226 RDMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLG 285
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
N+D+ LF ++ E+ +PD++TYN ++D Y K ++ +L M C+P+ IT+N
Sbjct: 286 NMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYN 345
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
L+DS K + + + ++ KP+ TFN MI + K A +FQ MT
Sbjct: 346 TLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDR 405
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P TY +I+ + + AR++ + +++ G V T N+++ C EA
Sbjct: 406 GCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEA 465
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
++E N G D T L K+ + +KLL+ ME+NG P+
Sbjct: 466 YEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPD 515
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 141/318 (44%), Gaps = 9/318 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + K + A + +M +GC P+ YN LI K + +A+ F
Sbjct: 239 YTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFC----KLGNMDEAVVLF 294
Query: 208 QKMKGMER-CKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M +E C P++ TYNIL+ C Q R D L +E+ + P+ TYN +MD+
Sbjct: 295 NQM--LENSCSPDVFTYNILIDGYCKQERPQDGAK-LLQEMVKYGCEPNFITYNTLMDSL 351
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K+G + ++ M CKP TFNL+ID + K D ++F+ + P +
Sbjct: 352 VKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDI 411
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+N MI +A A + ++MT P +TY I++ V A E+++
Sbjct: 412 YTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEV 471
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
L G + V T + +++ C + +A+ L G PD Y +L + KA+
Sbjct: 472 LRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQ 531
Query: 446 KELVQKLLKRMEQNGIVP 463
+ M G VP
Sbjct: 532 LDKSLAFFSEMLDKGCVP 549
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 154/349 (44%), Gaps = 6/349 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + L KS K++ + + M ++ + ++ +I + K GQ LA LF M +
Sbjct: 347 LMDSLVKSGKYIDAFNLAQMMLRRDCKPSHF-TFNLMIDMFCKVGQLDLAYELFQLMTDR 405
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC PD YN +I+ +A + A ++M C P++VTYN ++ +A
Sbjct: 406 GCLPDIYTYNIMISGAC----RANRIDDARQLLERMTE-AGCPPDVVTYNSIVSGLCKAS 460
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
VD+ +++ L D+ T + ++D K+ + + E +L M+ N PD++ +
Sbjct: 461 QVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYT 520
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+LI + K DK F ++ PT+ T++ +I K+ + + M
Sbjct: 521 ILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLER 580
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
TP I Y +I D+ A E++ + + G V T N +++ C EA
Sbjct: 581 GVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEA 640
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
L E + G PD+ TY ++ + K+ + +L + M+ G P
Sbjct: 641 IHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSP 689
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 151/348 (43%), Gaps = 34/348 (9%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL---HTRDKAKALAKAL 204
Y+ LI K G A+ LF++M + C PD YN LI + +D AK L + +
Sbjct: 274 YNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMV 333
Query: 205 GY-------------------------FQKMKGMER--CKPNIVTYNILLRACAQARNVD 237
Y F + M R CKP+ T+N+++ + +D
Sbjct: 334 KYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLD 393
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
LF+ + + PDIYTYN ++ + I + +L RM C PD++T+N ++
Sbjct: 394 LAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIV 453
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
K D+ +V++ L + + T +++I K+R AE + ++M
Sbjct: 454 SGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSA 513
Query: 358 PSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
P + Y I ++G+C D + ++ F E+ G V T + +++ C + +
Sbjct: 514 PDVVAY--TILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGC 571
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
+L + GVTPD+ Y + K++ + +L K M+Q G P
Sbjct: 572 MLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAP 619
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 129/278 (46%), Gaps = 12/278 (4%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L K+ + + EV+ ++ +++ D S LI + K + A L EM +G P
Sbjct: 456 LCKASQVDEAYEVYEVLRNGGYFL-DVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAP 514
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILL-RACAQARN 235
D Y LI H KA L K+L +F +M KG C P ++TY+I++ + C AR
Sbjct: 515 DVVAYTILI----HGFCKADQLDKSLAFFSEMLDKG---CVPTVITYSIVIDKLCKSARV 567
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
D L K + E + PD Y V+D K+ E + MK C P ++T+N+
Sbjct: 568 RDGC-MLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNV 626
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
L+D K D+ + + + P T+NS+ + K+ KA +FQ M +
Sbjct: 627 LVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRG 686
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
+P+ Y ++T + + +A EI++E + G D+
Sbjct: 687 CSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADV 724
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 131/336 (38%), Gaps = 73/336 (21%)
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L KA+ +F G K + T N LL A + + + LFK + +PD TY+
Sbjct: 112 LDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYS 171
Query: 260 GVMDAYGK--------------------------NGMIK------EMESVLSRMKSNQ-- 285
+++ + K N +IK ++S L + Q
Sbjct: 172 TLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRN 231
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
C P +IT+ +L+D+ K + + ++ + P + T+N++I + K +A
Sbjct: 232 CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAV 291
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYC------DNVSRARE---------------IFD 384
+F +M +P TY +I GYC D +E + D
Sbjct: 292 VLFNQMLENSCSPDVFTYNILID--GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMD 349
Query: 385 ELSKLGK--------------DMKVS--TLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
L K GK D K S T N M++ +C G A LF+ + G P
Sbjct: 350 SLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLP 409
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
D TY ++ +AN + ++LL+RM + G P+
Sbjct: 410 DIYTYNIMISGACRANRIDDARQLLERMTEAGCPPD 445
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 374 DNVSRAREIFDELS-KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV-TPDSS 431
D++ +A + FD + + G T N +L A+ EA LF+N H G+ +PDS
Sbjct: 110 DDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKN-HRCGLCSPDSI 168
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
TY L + KA + +LL ME+ GIVP+ +
Sbjct: 169 TYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVY 205
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 155/357 (43%), Gaps = 40/357 (11%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +Y+ I + G+ A EMRN+G PD + YN +I A R + +KA
Sbjct: 571 DAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAA----RCREGKTSKA 626
Query: 204 LGYFQKMKGMERCKPNIVTYNIL-----------------------------------LR 228
L ++MK KPN++TY L L+
Sbjct: 627 LKLLKEMK-RNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQ 685
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
AC+ +R D + + + + + L DI YN ++ +GM + VL M + P
Sbjct: 686 ACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAP 745
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
D ITFN LI + K D ++ ++H P + TFN+++ A G+A+ V
Sbjct: 746 DTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVL 805
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
M + P+ +TY+ ++T Y N A ++ E+ G K ST N+++ +
Sbjct: 806 SDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKA 865
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
G+ +A LF GV SSTY +L ++K V+ LLK M++ G P+K
Sbjct: 866 GMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSK 922
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 161/341 (47%), Gaps = 14/341 (4%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKAL 200
ADT Y+ +A + ++G RLA + SEM G D + + T +A AL
Sbjct: 113 ADTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAAL 172
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
A+ L + + G++ +V +N L+ + +++ A+ + + +A D+ YN
Sbjct: 173 AEMLVRGRGIDGLD-----VVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNS 227
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ + +G V+ RMK++ +P+++T+ LI Y K + D+ +++ ++ S
Sbjct: 228 LVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSG 287
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P + T ++++ + +A +F++M + P+ +TY +I S +
Sbjct: 288 VLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESL 347
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ E+ G M + A+++ G EA + ++ + +TP+ TY +L A+
Sbjct: 348 GLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAH 407
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
+A + +++L +ME+ ++PN + TFSS + G
Sbjct: 408 CRAGNIDGAEQVLLQMEEKSVIPN-------VVTFSSIING 441
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 148/345 (42%), Gaps = 10/345 (2%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
F G +D L+ +E K + Y+ LI K A L+ M SG
Sbjct: 232 FFHSGDADAALEVVE----RMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSG 287
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
PD +AL+ RD + A AL F++M + PN VTY L+ + A+AR
Sbjct: 288 VLPDVVTLSALVDGL--CRDGQFSEAYAL--FREMDKIG-VAPNHVTYCTLIDSLAKARR 342
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
+ L E+ + D+ Y +MD GK G I+E + VL +S+ P+ +T+ +
Sbjct: 343 GSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTV 402
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
L+D++ + D EQV + P + TF+S+I K GKA +KM
Sbjct: 403 LVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSG 462
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
P+ +TY +I + A +++ ++ G + +++++ NG A+
Sbjct: 463 IAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAE 522
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTK-ANMKELVQKLLKRMEQN 459
LF++ G+ D Y L K NM + + ME+N
Sbjct: 523 ALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKN 567
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/474 (20%), Positives = 195/474 (41%), Gaps = 74/474 (15%)
Query: 62 VWTRPRSKRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGK 121
++T + G++ + E+K+++R + + + Y +V + HC G
Sbjct: 364 MYTALMDRLGKEGKIEEAKDVLR-----HAQSDNITPNFVTYTVLVDA-HC-----RAGN 412
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
D Q L +++ I + +S +I + K+G A +M++SG P+
Sbjct: 413 IDGAEQVL----LQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVV 468
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
Y LI K + AL ++ M E + N + L+ + N++ A
Sbjct: 469 TYGTLIDGFF----KFQGQEAALDVYRDML-HEGVEANNFVVDSLVNGLRKNGNIEGAEA 523
Query: 242 LFK-----------------------------------ELHESILAPDIYTYNGVMDAYG 266
LFK EL E L+PD YN ++
Sbjct: 524 LFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLC 583
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
G E +S L M++ +PD T+N +I + + K ++ K + + KP L
Sbjct: 584 TLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLI 643
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T+ ++++ +A + KA+++ +M + + P+ +T++ ++ C SR ++ E+
Sbjct: 644 TYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQA---CSG-SRRPDVILEI 699
Query: 387 SKL----GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+L G ++ N ++ C +G+ A ++ + G+ PD+ T+ L + K
Sbjct: 700 HELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCK 759
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQS----GSAKTDLT 492
++ + + +M G+ PN + TF++ L G +S G A T L+
Sbjct: 760 SSHLDNAFAIYAQMLHQGLSPN-------IATFNTLLGGLESAGRIGEADTVLS 806
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 157/355 (44%), Gaps = 20/355 (5%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
+F+ M +R + D Y+ L+ + K G A + E+ PD VYN I
Sbjct: 524 LFKDMD-ERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINC- 581
Query: 191 LHTRDKAKALAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
L T K ++A + ++M+ G+E P+ TYN ++ A + + L KE+
Sbjct: 582 LCTLGK---FSEAKSFLKEMRNTGLE---PDQATYNTMIAARCREGKTSKALKLLKEMKR 635
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
+ + P++ TY ++ + G++K+ + +L+ M S P +T ++ + + D
Sbjct: 636 NSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDV 695
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMI---INYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+ ++ + +M + + +N+++ +G AR A V +M P IT+
Sbjct: 696 ILEIHELMMGAGLHADITVYNTLVHVLCCHGMAR---NATVVLDEMLTRGIAPDTITFNA 752
Query: 366 IITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+I G+C ++ A I+ ++ G ++T N +L G EAD + +
Sbjct: 753 LI--LGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKK 810
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+G+ P++ TY +L Y K + K +L M G +P + + F+ +
Sbjct: 811 VGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKA 865
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 121/247 (48%), Gaps = 11/247 (4%)
Query: 171 MRNSGCRPDPSVYNALI---TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
M +G D +VYN L+ H R+ L + L +G+ P+ +T+N L+
Sbjct: 703 MMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEML-----TRGI---APDTITFNALI 754
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
++ ++D A++ ++ L+P+I T+N ++ G I E ++VLS MK +
Sbjct: 755 LGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLE 814
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P+ +T+++L+ Y K+ + +++ ++ P T+NS++ ++ KA + +A+ +
Sbjct: 815 PNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKEL 874
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F +M + TY+ ++ + N R + ++ +LG T+++M A+
Sbjct: 875 FSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSR 934
Query: 408 NGLPTEA 414
G+ EA
Sbjct: 935 PGMTGEA 941
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 6/231 (2%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
LE+ M + AD +Y+ L+ V+ G R A + EM G PD +NALI
Sbjct: 697 LEIHELMMGAGLH-ADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALIL 755
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
H K+ L A + +M + PNI T+N LL A + + + + ++ +
Sbjct: 756 GHC----KSSHLDNAFAIYAQML-HQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKK 810
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
L P+ TY+ ++ Y K E + M S P T+N L+ + K ++
Sbjct: 811 VGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQ 870
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
+++F + T T++ ++ + K R + + + M + + PS
Sbjct: 871 AKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPS 921
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 94/236 (39%), Gaps = 2/236 (0%)
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
+A D +YN + A + G + VLS M D +T + + + +
Sbjct: 111 VAADTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAA 170
Query: 311 QVFKSLMHSKEKPTLPT--FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+ + L+ + L +N++I Y K + A V ++MT + Y ++
Sbjct: 171 ALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVA 230
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
+ + + A E+ + + G + V T A++ YC EA L+E GV P
Sbjct: 231 GFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLP 290
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQS 484
D T L + L + M++ G+ PN + +++ + + GS+S
Sbjct: 291 DVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSES 346
>gi|225445222|ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
[Vitis vinifera]
gi|297738818|emb|CBI28063.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 146/326 (44%), Gaps = 6/326 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D+ ++ +I + G + AM +F +M++ GC+P S +N LI + A +
Sbjct: 140 DSVFFNAMINAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGY----GNAGMPEEC 195
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
L M E KPN T+N L+RA C + R + N ++K + S L PD+ TYN +
Sbjct: 196 LKLLDLMSQEENVKPNDRTFNSLIRAWCNKKRITEAWNVVYK-MAASGLQPDVVTYNTLA 254
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
AY +NG E ++ M++N+ P+ T ++I+ Y K + + +
Sbjct: 255 RAYAQNGETSRAEGMILEMQNNRVMPNERTCGIIINGYCKEGKMKDALRFLYRMRNYGVH 314
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P L FNS+I + + M P +T+ I+ + + + +EI
Sbjct: 315 PNLVIFNSLIKGFLDITDTDGVDEALTLMEEFGVKPDVVTFSTIMNAWSSVGLMDKCQEI 374
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
FD++ K G + + + + + Y G P +A+ L GV P+ + + +
Sbjct: 375 FDDMVKAGIEPDIHAFSILAKGYVRAGEPEKAESLLTAMGKSGVQPNVVIFTTIISGWCS 434
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFF 468
A E ++ ++M + GI PN + F
Sbjct: 435 AGKMEYASRVYEKMCEMGICPNLKTF 460
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 151/332 (45%), Gaps = 6/332 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+A + ++ + + L S++ +G +PD +NA+I A + + + +A+ F
Sbjct: 109 YTTLLAALTRQKRFKSIPSLISKLEKNGLKPDSVFFNAMINAFSESGN----VKEAMKIF 164
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL-HESILAPDIYTYNGVMDAYG 266
+KMK CKP T+N L++ A ++ L + E + P+ T+N ++ A+
Sbjct: 165 RKMKD-RGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQEENVKPNDRTFNSLIRAWC 223
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
I E +V+ +M ++ +PD++T+N L +Y + + E + + +++ P
Sbjct: 224 NKKRITEAWNVVYKMAASGLQPDVVTYNTLARAYAQNGETSRAEGMILEMQNNRVMPNER 283
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T +I Y K A +M P+ + + +I + + E +
Sbjct: 284 TCGIIINGYCKEGKMKDALRFLYRMRNYGVHPNLVIFNSLIKGFLDITDTDGVDEALTLM 343
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
+ G V T + ++ A+ GL + +F++ G+ PD + +L K Y +A
Sbjct: 344 EEFGVKPDVVTFSTIMNAWSSVGLMDKCQEIFDDMVKAGIEPDIHAFSILAKGYVRAGEP 403
Query: 447 ELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
E + LL M ++G+ PN F + + S+
Sbjct: 404 EKAESLLTAMGKSGVQPNVVIFTTIISGWCSA 435
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 117/263 (44%), Gaps = 3/263 (1%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+P ++TY LL A + + + +L +L ++ L PD +N +++A+ ++G +KE
Sbjct: 103 RPTLITYTTLLAALTRQKRFKSIPSLISKLEKNGLKPDSVFFNAMINAFSESGNVKEAMK 162
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE--KPTLPTFNSMIIN 334
+ +MK CKP TFN LI YG ++ ++ LM +E KP TFNS+I
Sbjct: 163 IFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEECLKLL-DLMSQEENVKPNDRTFNSLIRA 221
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
+ + +A V KM A P +TY + Y SRA + E+
Sbjct: 222 WCNKKRITEAWNVVYKMAASGLQPDVVTYNTLARAYAQNGETSRAEGMILEMQNNRVMPN 281
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
T ++ YC G +A N GV P+ + L K + + V + L
Sbjct: 282 ERTCGIIINGYCKEGKMKDALRFLYRMRNYGVHPNLVIFNSLIKGFLDITDTDGVDEALT 341
Query: 455 RMEQNGIVPNKRFFLEALETFSS 477
ME+ G+ P+ F + +SS
Sbjct: 342 LMEEFGVKPDVVTFSTIMNAWSS 364
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 169/407 (41%), Gaps = 44/407 (10%)
Query: 74 SEELESKELVRVLMRSFSDK--EPLVRTLNKYVK----VVRSEHCFLLF------EELGK 121
SE KE +++ R D+ +P T N +K E C L E +
Sbjct: 152 SESGNVKEAMKIF-RKMKDRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQEENVKP 210
Query: 122 SDKWLQCLEVFRWMQKQR----WYIA----------DTGIYSKLIAVMGKKGQTRLAMWL 167
+D+ L + W K+R W + D Y+ L + G+T A +
Sbjct: 211 NDRTFNSL-IRAWCNKKRITEAWNVVYKMAASGLQPDVVTYNTLARAYAQNGETSRAEGM 269
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
EM+N+ P+ +I + K + AL + +M+ PN+V +N L+
Sbjct: 270 ILEMQNNRVMPNERTCGIIINGYC----KEGKMKDALRFLYRMRNY-GVHPNLVIFNSLI 324
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
+ + D V+ + E + PD+ T++ +M+A+ G++ + + + M +
Sbjct: 325 KGFLDITDTDGVDEALTLMEEFGVKPDVVTFSTIMNAWSSVGLMDKCQEIFDDMVKAGIE 384
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY- 346
PDI F++L Y + +K E + ++ S +P + F ++I + A GK EY
Sbjct: 385 PDIHAFSILAKGYVRAGEPEKAESLLTAMGKSGVQPNVVIFTTIISGWCSA---GKMEYA 441
Query: 347 --VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
V++KM M P+ T+E +I YG +A E+ + + G ST+ + +A
Sbjct: 442 SRVYEKMCEMGICPNLKTFETLIWGYGEAKEPQKAEELLQIMEQKGVAPVKSTIQLVADA 501
Query: 405 YCMNGLPTEADLLFENSHN-----MGVTPDSSTYKLLYKAYTKANMK 446
+ GL EA + + + D + L + Y K N+K
Sbjct: 502 WHALGLANEAKRIKNDVEEAPKVMISTKEDDVAAESLERIYQKQNLK 548
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 107/235 (45%), Gaps = 1/235 (0%)
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
+F L E P + TY ++ A + K + S++S+++ N KPD + FN +I+++
Sbjct: 93 IFNSLTEEGHRPTLITYTTLLAALTRQKRFKSIPSLISKLEKNGLKPDSVFFNAMINAFS 152
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK-YTPSF 360
+ + ++F+ + KPT TFN++I YG A + + + M+ + P+
Sbjct: 153 ESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQEENVKPND 212
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
T+ +I + ++ A + +++ G V T N + AY NG + A+ +
Sbjct: 213 RTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPDVVTYNTLARAYAQNGETSRAEGMILE 272
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
N V P+ T ++ Y K + + L RM G+ PN F ++ F
Sbjct: 273 MQNNRVMPNERTCGIIINGYCKEGKMKDALRFLYRMRNYGVHPNLVIFNSLIKGF 327
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
+N ++E G P EA L+F + G P TY L A T+ + + L+ ++E
Sbjct: 78 MNILIE----KGKPQEAQLIFNSLTEEGHRPTLITYTTLLAALTRQKRFKSIPSLISKLE 133
Query: 458 QNGIVPNKRFFLEALETFSSS 478
+NG+ P+ FF + FS S
Sbjct: 134 KNGLKPDSVFFNAMINAFSES 154
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 162/355 (45%), Gaps = 10/355 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + D+ L +F M Y + IY+ +I + K Q A+ L + M
Sbjct: 157 LLNGFCRGDRVYDALYMFDQMVGM-GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD 215
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G PD YN+LI+ L + + + + K P++ T+N L+ AC +
Sbjct: 216 GIGPDVVTYNSLISG-LCSSGRWSDATRMVSCMTK----REIYPDVFTFNALIDACVKEG 270
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
V + ++E+ L PDI TY+ ++ + E E + M S C PD++T++
Sbjct: 271 RVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYS 330
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+LI+ Y K + + ++F + T+ +I Y +A AE +F++M
Sbjct: 331 ILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFC 390
Query: 355 KYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
P+ ITY + ++G CDN + +A I ++ K G D + T N ++ C G
Sbjct: 391 GVHPNIITYN--VLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVA 448
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
+A ++ + + G+ PD TY + K ++ L ++M+++GI+PN+ +
Sbjct: 449 DAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNECY 503
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 145/334 (43%), Gaps = 10/334 (2%)
Query: 131 VFRWMQKQRWYIA-DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
++ W Q Q I + + L+ + Q LA+ +M G P + +L+
Sbjct: 101 IYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNG 160
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ + AL F +M GM KPN+V YN ++ +++ VD L + +
Sbjct: 161 FC----RGDRVYDALYMFDQMVGMGY-KPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD 215
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+ PD+ TYN ++ +G + ++S M + PD+ TFN LID+ K +
Sbjct: 216 GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEA 275
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
E+ ++ ++ P + T++ +I +AE +F M + P +TY +I
Sbjct: 276 EEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILIN- 334
Query: 370 YGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
GYC + V ++F E+S+ G T +++ YC G A+ +F GV
Sbjct: 335 -GYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVH 393
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
P+ TY +L E +L M++NG+
Sbjct: 394 PNIITYNVLLHGLCDNGKIEKALVILADMQKNGM 427
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 146/325 (44%), Gaps = 12/325 (3%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
IAD +S+L++ + K + + ++L+ +M+ G + N L+ + L+
Sbjct: 81 IAD---FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC----RCSQLS 133
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
AL + KM + +P+IVT+ LL + V +F ++ P++ YN +
Sbjct: 134 LALSFLGKMIKLGH-EPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTI 192
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+D K+ + +L+RM+ + PD++T+N LI + ++ + +
Sbjct: 193 IDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREI 252
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRA 379
P + TFN++I K +AE +++M P +TY +I YG C + A
Sbjct: 253 YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI--YGLCMYSRLDEA 310
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
E+F + G V T + ++ YC + LF GV ++ TY +L +
Sbjct: 311 EEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQG 370
Query: 440 YTKANMKELVQKLLKRMEQNGIVPN 464
Y +A + +++ +RM G+ PN
Sbjct: 371 YCRAGKLNVAEEIFRRMVFCGVHPN 395
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 119/291 (40%), Gaps = 41/291 (14%)
Query: 213 MERCKP--NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
M +C+P +I ++ LL A ++ + D V L++++ + ++ T N +++ + +
Sbjct: 72 MVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQ 131
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
+ S L +M +P I+TF L++ + + +F ++ KP + +N+
Sbjct: 132 LSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNT 191
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--------------- 375
+I K++ A + +M P +TY +I+ G C +
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLIS--GLCSSGRWSDATRMVSCMTK 249
Query: 376 ----------------------VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
VS A E ++E+ + D + T + ++ CM E
Sbjct: 250 REIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDE 309
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A+ +F + G PD TY +L Y K+ E KL M Q G+V N
Sbjct: 310 AEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 84/192 (43%), Gaps = 7/192 (3%)
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
D +F ++ + P++ F+ ++ K + Y++++M + + T
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
++ + C +S A ++ KLG + + T ++L +C +A +F+ MG
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSG 485
P+ Y + K+ + LL RME++GI P+ + T++S ++G S
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPD-------VVTYNSLISGLCSS 234
Query: 486 SAKTDLTRSLST 497
+D TR +S
Sbjct: 235 GRWSDATRMVSC 246
>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Brachypodium distachyon]
Length = 410
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 150/324 (46%), Gaps = 11/324 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH-LHTRDKAKALAK 202
D + L+ + G A +F M G P+ + ALI + +H R + K
Sbjct: 37 DVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRRE-----K 91
Query: 203 ALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
L F+KM+ G+E PN+ TYNIL+ + ++ LF+E+ + ++ +YN
Sbjct: 92 GLALFEKMRIGGIE---PNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNT 148
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ + +K+ +L M+ +P ++TFNLL+D YGK + +
Sbjct: 149 LIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAG 208
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P+ T+N++I + +AR +A F M P+ +TY +I + +++ +A
Sbjct: 209 YQPSAVTYNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAF 268
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
E+F + K G ++ V T ++ A CM G +A LF++ G+ + Y +L Y
Sbjct: 269 EMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGY 328
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
+ KL+ M + G VPN
Sbjct: 329 GREGSSYKAMKLIMEMRKKGFVPN 352
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 125/319 (39%), Gaps = 46/319 (14%)
Query: 159 GQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERC 216
G+ + LF +MR G P+ YN L+ T + +A F++M KG+ R
Sbjct: 87 GRREKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGE----FERARLLFEEMPAKGITR- 141
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG------- 269
N+V+YN L+ + R + L + + + P + T+N ++D YGK G
Sbjct: 142 --NVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALH 199
Query: 270 -----------------------------MIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
MI+ S MK P +T+ +LID++
Sbjct: 200 FSNQMRMAGYQPSAVTYNALIAGFCRARDMIRA-NRAFSDMKERGLAPTKVTYTILIDAF 258
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
+ DK ++F + + + + T+ ++ A +FQ +
Sbjct: 259 ARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGN 318
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
+ Y+ +I YG + +A ++ E+ K G ++ + C +G +EA+ L ++
Sbjct: 319 VIYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDD 378
Query: 421 SHNMGVTPDSSTYKLLYKA 439
GV S ++L A
Sbjct: 379 MVRAGVQTSESVRQVLLNA 397
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 72/177 (40%), Gaps = 1/177 (0%)
Query: 269 GMIKEMESVLSR-MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G ++ ++L+R K+ D+ L+ Y + + ++VF + P T
Sbjct: 16 GEVRSALALLARGAKAGDTTLDVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVT 75
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
F ++I Y + K +F+KM P+ TY ++ + RAR +F+E+
Sbjct: 76 FTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMP 135
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
G V + N ++ C +A L E G+ P T+ LL Y KA
Sbjct: 136 AKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAG 192
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 169/350 (48%), Gaps = 8/350 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
++ ++G+S W + LE+ M + R D S +++ G++G A FS +++
Sbjct: 266 VYGKMGRS--WDKILELLDEM-RSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSE 322
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G +P YNAL LH KA ++AL +M+ C P+ VTYN ++ A +A
Sbjct: 323 GYKPGTVTYNAL----LHVFGKAGIFSEALSVLSEME-ENNCPPDAVTYNEVVAAYVRAG 377
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
++ + + + P+ TY +++AYG+ G I + + +M C P++ T+N
Sbjct: 378 FHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYN 437
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++ GK+ ++M ++ + + P T+N+M+ GK + VF++M
Sbjct: 438 AVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNC 497
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ P T+ +I+ YG C + + A ++ +E+ K G ++T NA+L A G A
Sbjct: 498 GFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAA 557
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ + + N G P ++Y L+ +Y K + ++ + K + I P+
Sbjct: 558 ESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPS 607
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 152/351 (43%), Gaps = 40/351 (11%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I G+ G A+ +F +M GC P+ + YNA++ L + ++ + K LG+
Sbjct: 401 YTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVL-GMLGKKSLSEEMMKILGHM 459
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL--------------------- 246
K+ G C PN +T+N +L C + VN +F+E+
Sbjct: 460 -KLNG---CSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGR 515
Query: 247 ----------HESIL----APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
HE ++ +P I TYN +++A + G K ESV+ M++ +P +
Sbjct: 516 CGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETS 575
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
++L++ SY K +E + KS+ P+ ++++ K R E FQ +
Sbjct: 576 YSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQ 635
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
Y P + +++++ + RA E+ + G + T N++++ Y G
Sbjct: 636 KHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCW 695
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
+A+ + G PD +Y + K + + + + ++L M G+ P
Sbjct: 696 KAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGP 746
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 138/321 (42%), Gaps = 11/321 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH---TRDKAKALAKAL 204
++ ++A+ GKKG + +F EM+N G PD +N LI+A+ D AK + +
Sbjct: 471 WNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMI 530
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
G C I TYN LL A A+ + ++ ++ P +Y+ ++ +
Sbjct: 531 -----KAGFSPC---INTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHS 582
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
Y K G +K +E + + P + L+ + K ++ ME+ F++L KP
Sbjct: 583 YAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPD 642
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
L NSM+ + K + +A + + + P +T+ ++ MY + +A E+
Sbjct: 643 LVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLR 702
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
L G + + N +++ +C GL E + ++GV P TY Y
Sbjct: 703 MLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQG 762
Query: 445 MKELVQKLLKRMEQNGIVPNK 465
M + ++ M + PN+
Sbjct: 763 MFTEINDVISYMIVHNCRPNE 783
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 124/272 (45%), Gaps = 33/272 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH--------LHTRDKA-- 197
Y+ L+ + ++G + A + +MRN G RP + Y+ ++ ++ + +K+
Sbjct: 541 YNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIY 600
Query: 198 -----------KALAKALGYFQKMKGMERC---------KPNIVTYNILLRACAQARNVD 237
+ L A + + GMER KP++V N +L A+ D
Sbjct: 601 DGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYD 660
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ + + + +H++ L PD+ T+N +MD Y + G + E VL ++++ KPD++++N +I
Sbjct: 661 RAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVI 720
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+ ++ + ++ + P + T+N+ I Y + + V M
Sbjct: 721 KGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYMIVHNCR 780
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKL 389
P+ +TY+ I GYC R E D +SK+
Sbjct: 781 PNELTYK--IVADGYC-KARRYDEAIDFVSKI 809
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 160/369 (43%), Gaps = 31/369 (8%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E F M +Q + DT +Y+ LI K+G R A F EM + PD Y A+I+
Sbjct: 337 EAFSEMIRQG-ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 190 HLHTRDKAKA-------LAKAL------------GYFQ--KMKGMER---------CKPN 219
D +A K L GY + MK R C PN
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+VTY L+ + ++D N L E+ + L P+I+TYN +++ K+G I+E ++
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
++ D +T+ L+D+Y K DK +++ K ++ +PT+ TFN ++ +
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLN 399
+ E + M A P+ T+ ++ Y +N+ A I+ ++ G T
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 635
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
+++ +C EA LF+ G + STY +L K + K +++ +M +
Sbjct: 636 NLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Query: 460 GIVPNKRFF 468
G+ +K F
Sbjct: 696 GLAADKEIF 704
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 157/348 (45%), Gaps = 9/348 (2%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
G+ DK + +EV K++ ++ IY +I ++ + + A FSEM G P
Sbjct: 294 FGELDKVWKLIEV----MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
D VY LI R +A +K +F +M + P+++TY ++ Q ++ +
Sbjct: 350 DTVVYTTLIDGFCK-RGDIRAASK---FFYEMHSRD-ITPDVLTYTAIISGFCQIGDMVE 404
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
LF E+ L PD T+ +++ Y K G +K+ V + M C P+++T+ LID
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
K D ++ + +P + T+NS++ K+ +A + + A
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 524
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+TY ++ Y + +A+EI E+ G + T N ++ +C++G+ + + L
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
G+ P+++T+ L K Y N + + K M G+ P+ +
Sbjct: 585 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 134/342 (39%), Gaps = 46/342 (13%)
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
+T A+ +F E G + + YN +I H + A L ++KG P+
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVI--HFVCQLGRIKEAHHLLLLMELKGY---TPD 280
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+++Y+ ++ + +D+V L + + L P+ Y Y ++ + + E E S
Sbjct: 281 VISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFS 340
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE------------------ 321
M PD + + LID + KR + F MHS++
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE-MHSRDITPDVLTYTAIISGFCQI 399
Query: 322 ------------------KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
+P TF +I Y KA A V M +P+ +TY
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 364 ECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
+I G C ++ A E+ E+ K+G + T N+++ C +G EA L
Sbjct: 460 TTLID--GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
G+ D+ TY L AY K+ + Q++LK M G+ P
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 147/347 (42%), Gaps = 6/347 (1%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
+L +D ++Q ++ + K + +D ++ V+ G R A +F +M N G
Sbjct: 150 KLNVTDSFVQFFDLLVYTYKD--WGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLV 207
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
N +T ++D K A A+ F++ + C N+ +YNI++ Q +
Sbjct: 208 LSVDSCNVYLTRL--SKDCYKT-ATAIIVFREFPEVGVCW-NVASYNIVIHFVCQLGRIK 263
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ + L + PD+ +Y+ V++ Y + G + ++ ++ MK KP+ + +I
Sbjct: 264 EAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSII 323
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+ + E+ F ++ P + ++I + K A F +M + T
Sbjct: 324 GLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT 383
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P +TY II+ + ++ A ++F E+ G + T ++ YC G +A +
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ G +P+ TY L K + +LL M + G+ PN
Sbjct: 444 HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 12/178 (6%)
Query: 296 LIDSYGKRQAF---DKMEQVFKSLMHS-----KEKPTLPTFNSMIINYGKARLQGKAEYV 347
LI S+ +R D Q F L+++ + F +++++G R +A V
Sbjct: 141 LISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLR---EARRV 197
Query: 348 FQKMTAMKYTPSFITYECIIT-MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
F+KM S + +T + C + A +F E ++G V++ N ++ C
Sbjct: 198 FEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVC 257
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G EA L G TPD +Y + Y + + V KL++ M++ G+ PN
Sbjct: 258 QLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 315
>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 732
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 170/377 (45%), Gaps = 15/377 (3%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ K +W + + + R MQ+ D YS I+ KKGQ A+ L EM
Sbjct: 331 IVIGACAKWGQWEEAVALLREMQENG-VAPDVITYSSTISACAKKGQWEEAVGLLREMPM 389
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G P+ Y +I+A R + + +A+ Q+M+ P+++ Y+ + ACAQA
Sbjct: 390 EGVTPNAISYGIVISA-CAKRGRWR---EAIDLLQEMQA-HGVPPDVINYSAAIDACAQA 444
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+Q L +E+ + L P++ +YN +DA K G K +L M ++ PD+IT+
Sbjct: 445 SRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITY 504
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+ +I S + +++ +F+ + P + + N+ I + +A V +M
Sbjct: 505 SAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPT 564
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFD---ELSKLGKDMKVSTLNAMLEAYCMNGL 410
M P I+Y I C R +EI D E+S +G + + A ++GL
Sbjct: 565 MGLVPDAISYRTAIDA---CAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGL 621
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
EA +L + +G++PD TY A K + LL++M G+ P+ F
Sbjct: 622 WKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNA 681
Query: 471 ALETFSSSLAGSQSGSA 487
A++ + G Q G+A
Sbjct: 682 AIDACGN---GDQWGTA 695
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 157/357 (43%), Gaps = 12/357 (3%)
Query: 111 HCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSE 170
H E + W + L+V MQ+Q D+ YS IA G Q A+ L +
Sbjct: 153 HLKATLREAKQYGDWRKALDVLDRMQEQG-VKPDSQNYSSAIAACGNARQWERAVELLAS 211
Query: 171 MRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRAC 230
M G PD Y++ I A K +A+G + MKG + KPN++ Y+ + AC
Sbjct: 212 MAARGTPPDVLTYSSAIAACA----KVSRWKEAVGLLRSMKG-QGVKPNVIVYSAAISAC 266
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
+ + L KE+ LAPD+ TY+ V+DA K G + +L M + +I
Sbjct: 267 RKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANI 326
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
IT++++I + K +++ + + + + P + T++S I K +A + ++
Sbjct: 327 ITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLRE 386
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFD---ELSKLGKDMKVSTLNAMLEAYCM 407
M TP+ I+Y +I+ C R RE D E+ G V +A ++A
Sbjct: 387 MPMEGVTPNAISYGIVISA---CAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQ 443
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+A L G+TP+ +Y A K ++ +LL+ M +G+ P+
Sbjct: 444 ASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPD 500
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 164/379 (43%), Gaps = 14/379 (3%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
K +W + + + R M+ Q + +YS I+ K GQ A+ L EM G PD
Sbjct: 233 KVSRWKEAVGLLRSMKGQG-VKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDV 291
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQ 238
Y+ +I A K A +M KG+ NI+TY+I++ ACA+ ++
Sbjct: 292 ITYSTVIDACA----KRGQWEPAFRLLMEMPTKGV---VANIITYSIVIGACAKWGQWEE 344
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
AL +E+ E+ +APD+ TY+ + A K G +E +L M P+ I++ ++I
Sbjct: 345 AVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVIS 404
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
+ KR + + + + + P + +++ I +A +A ++ ++M A TP
Sbjct: 405 ACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTP 464
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+ I+Y I A E+ E+ G V T +A++ + M EA LF
Sbjct: 465 NVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLF 524
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
G+TPD + A + E +L M G+VP+ + A++ +
Sbjct: 525 REMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAID----A 580
Query: 479 LAGSQSGSAKTDLTRSLST 497
A DL R +ST
Sbjct: 581 CAKGDRWKEIIDLLREMST 599
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 118/280 (42%), Gaps = 7/280 (2%)
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
KAL +M+ + KP+ Y+ + AC AR ++ L + PD+ TY+
Sbjct: 169 KALDVLDRMQ-EQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSA 227
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ A K KE +L MK KP++I ++ I + K ++ + K +
Sbjct: 228 IAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGL 287
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQ---KMTAMKYTPSFITYECIITMYGYCDNVSR 378
P + T++++I K +G+ E F+ +M + ITY +I
Sbjct: 288 APDVITYSTVIDACAK---RGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEE 344
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A + E+ + G V T ++ + A G EA L GVTP++ +Y ++
Sbjct: 345 AVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVIS 404
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
A K LL+ M+ +G+ P+ + A++ + +
Sbjct: 405 ACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQA 444
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 7/227 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS +IA Q A+ LF EM+ G PD N I A +AL
Sbjct: 500 DVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEAL-DV 558
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
LG M + P+ ++Y + ACA+ ++ L +E+ L PD +Y M
Sbjct: 559 LGEMPTMGLV----PDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMS 614
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
A +G+ KE +L M + PD++T+N I++ K + + + + + P
Sbjct: 615 ACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAP 674
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+ +FN+ I G G A V +M A+ +P+ TY + MY
Sbjct: 675 DVNSFNAAIDACGNGDQWGTAVEVLFEMRALGVSPNEATY--LTAMY 719
>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 452
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 158/342 (46%), Gaps = 26/342 (7%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + K G+TR AM + + +P+ +Y+ +I ++ K K + A +
Sbjct: 87 YGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTII----YSLCKDKLVIDAFDLY 142
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M ++R P+++TYN L+ C + + LF ++ + PDIYT+N ++D K
Sbjct: 143 SQML-LKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCK 201
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G +K+ +VL+ M PD+IT+N L+D Y + +K VF ++ P + +
Sbjct: 202 EGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHS 261
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
++ MI K ++ +A + ++M + P+ +TY +I + A ++ +E+
Sbjct: 262 YSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMH 321
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK------------- 434
G+ V T N++L+A C N +A L + G+ PD TY
Sbjct: 322 NRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLK 381
Query: 435 --------LLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
LL K Y ++ + LL +ME NG PN F
Sbjct: 382 DAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTF 423
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 134/321 (41%), Gaps = 58/321 (18%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++ L+ + K+G+ + A + + M PD YN+L+ + + + KA
Sbjct: 188 DIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATF-- 245
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F M P++ +Y++++ + + VD+ L KE+H +AP+ TY+ ++D
Sbjct: 246 --VFNTM-ARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLID 302
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K+G I + +++ M + D+IT+N L+D+ K D
Sbjct: 303 GLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVD---------------- 346
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRARE 381
KA + K+ P TY ++ G C N + A+E
Sbjct: 347 -------------------KAITLLTKIKDQGIQPDIYTYTILVD--GLCKNGRLKDAQE 385
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
++ L +++ Y ++ L +A L + G TP+ T+++L +A
Sbjct: 386 VYQIL--------------LIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRALF 431
Query: 442 KANMKELVQKLLKRMEQNGIV 462
+ +M + +LL+ M G++
Sbjct: 432 ENDMNDKAVELLREMIARGLL 452
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VF M + R D YS +I + K A+ L EM + P+ Y++LI
Sbjct: 246 VFNTMAR-RGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDG- 303
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKP-NIVTYNILLRACAQARNVDQVNALFKELHES 249
LH K+ + A +M R +P +++TYN LL A + VD+ L ++ +
Sbjct: 304 LH---KSGRIFDAWDLVNEMH--NRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQ 358
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEME---------------------SVLSRMKSNQCKP 288
+ PDIYTY ++D KNG +K+ + S+LS+M+ N C P
Sbjct: 359 GIQPDIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTP 418
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
+ +TF +LI + + DK ++ + ++
Sbjct: 419 NPVTFEILIRALFENDMNDKAVELLREMI 447
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 10/179 (5%)
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
+++ LID K QV +++ +P + ++++I + K +L A ++ +
Sbjct: 85 VSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLCKDKLVIDAFDLYSQ 144
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRARE---IFDELSKLGKDMK--VSTLNAMLEAY 405
M + +P ITY + MYG C V R +E +F+++ L K++K + T N +++
Sbjct: 145 MLLKRISPDVITYNTL--MYG-CLIVGRLKEAVGLFNQM--LLKNIKPDIYTFNILVDGL 199
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
C G +A + V PD TY L Y + + M + G+ P+
Sbjct: 200 CKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPD 258
>gi|357502623|ref|XP_003621600.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496615|gb|AES77818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 890
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 170/383 (44%), Gaps = 8/383 (2%)
Query: 66 PRSKRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYV-KVVRSEHCFLLFEELGKSDK 124
PR + + + E + L ++ ++ + Y K+ E + +E G +
Sbjct: 132 PRVTPNKHAHSAAADEALSCLFKAGNNIAAIDNVFISYEHKLWEVEDYIYMLKEFGNTRS 191
Query: 125 WLQCLEVFRW-MQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
L + F + M KQ + + S +I +G+ G+ LA+ LF R G +
Sbjct: 192 LLHAKKCFDFIMSKQNGRVDKGKLVSAMIGTLGRLGEINLALGLFERARLEGYGSTVHSF 251
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR-NVDQVNAL 242
+A+I+A + A+ F+ M PN++TYN ++ A A+ + D V
Sbjct: 252 SAMISAF----GRNGRFPDAVDLFRSMSSWG-VVPNVITYNSIIDAGAKGEVSFDVVVKF 306
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
+ E+ + L PD TYN ++ GM + + +LS M PD+ T+N +D+ K
Sbjct: 307 YDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPDVFTYNTYLDTLCK 366
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
D +VF+ + + P + T+++M+ Y KA L A ++++M ++
Sbjct: 367 AGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRVS 426
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y ++ +Y N+ A E E+ + G + V T NA+L Y +G+ E LFE
Sbjct: 427 YNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEMK 486
Query: 423 NMGVTPDSSTYKLLYKAYTKANM 445
+ P++ TY + YTK M
Sbjct: 487 ARNIYPNTLTYSTMIDMYTKGEM 509
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 153/335 (45%), Gaps = 16/335 (4%)
Query: 111 HCF-LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTR--LAMWL 167
H F + G++ ++ +++FR M W + I I G KG+ + +
Sbjct: 249 HSFSAMISAFGRNGRFPDAVDLFRSMSS--WGVVPNVITYNSIIDAGAKGEVSFDVVVKF 306
Query: 168 FSEMRNSGCRPDPSVYNALIT--AHLHTRDKAKALAKALGYFQKMKGMERC-KPNIVTYN 224
+ EM +G PD YN+L++ A + A+ L + + RC P++ TYN
Sbjct: 307 YDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDH--------RCIVPDVFTYN 358
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
L +A +D +F+E+ + P++ TY+ +MD Y K ++++ ++ MK
Sbjct: 359 TYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLR 418
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
D +++N L+ Y K D+ + K + S + T+N+++ YGK + +
Sbjct: 419 SVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEV 478
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
+F++M A P+ +TY +I MY + A +++ E ++ V +A+++
Sbjct: 479 RRLFEEMKARNIYPNTLTYSTMIDMYTKGEMFQEAMDVYREFKMARLEIDVVFYSAIIDT 538
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
C NGL + +L G+ P+ T+ + A
Sbjct: 539 LCKNGLMESSIMLLMAMMEKGIKPNVVTFNSIIDA 573
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 130/281 (46%), Gaps = 4/281 (1%)
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ-ARNVDQVNALFK 244
L++A + T + + ALG F++ + +E + +++ ++ A + R D V+ LF+
Sbjct: 215 LVSAMIGTLGRLGEINLALGLFERAR-LEGYGSTVHSFSAMISAFGRNGRFPDAVD-LFR 272
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGM-IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR 303
+ + P++ TYN ++DA K + + M +N PD +T+N L+ +
Sbjct: 273 SMSSWGVVPNVITYNSIIDAGAKGEVSFDVVVKFYDEMIANGLMPDRLTYNSLLSVCASK 332
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
++ +++ + H P + T+N+ + KA A VF++M++ + P+ +TY
Sbjct: 333 GMWEMAQKLLSEMDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTY 392
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
++ Y + + A +++E+ + + N ++ Y G EA +
Sbjct: 393 SAMMDGYAKANLLEDALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMER 452
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G+ D TY L Y K M + V++L + M+ I PN
Sbjct: 453 SGINRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARNIYPN 493
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 131/320 (40%), Gaps = 37/320 (11%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + K G A+ EM SG D YNAL++ + K + F
Sbjct: 427 YNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGY----GKHGMYDEVRRLF 482
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++MK PN +TY+ ++ + + +++E + L D+ Y+ ++D K
Sbjct: 483 EEMKA-RNIYPNTLTYSTMIDMYTKGEMFQEAMDVYREFKMARLEIDVVFYSAIIDTLCK 541
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDS--------YGKRQAFDKMEQ-------- 311
NG+++ +L M KP+++TFN +ID+ YG + D ++
Sbjct: 542 NGLMESSIMLLMAMMEKGIKPNVVTFNSIIDASQQSPTLEYGVNGSSDAIDYPIEQSSPI 601
Query: 312 VFKSLMHSK--EKPTLPTFNSMII---NYGKARLQGKAE-----YVFQKMTAMKYTPSFI 361
V +K E L F + + K G+ + ++FQKM + P+ +
Sbjct: 602 VIDGAFQNKPGEDRILKMFEQLAAEKAGHLKKNRSGRQDKHCILWLFQKMHELNIKPNVV 661
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
T+ I+ C++ A + D L +L + N +L Y + A+ LF+
Sbjct: 662 TFSAILNACSLCNSYEDASLLLDTL-RLFDNQVYGVTNGLLMGY-REQVWLSAETLFDEL 719
Query: 422 HNMGVTPDSSTYKLLYKAYT 441
M D ST Y A T
Sbjct: 720 MCM----DPSTSSAFYNALT 735
>gi|225424178|ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial [Vitis vinifera]
Length = 531
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 173/357 (48%), Gaps = 8/357 (2%)
Query: 114 LLFEELGK-SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMR 172
L+ E L K S+ + L FRW +KQ+ + T Y+ LI +GK Q ++ L ++MR
Sbjct: 113 LVLEVLKKLSNSGVIALSFFRWAEKQKGFKYSTENYNALIEALGKIKQFKMIWNLVNDMR 172
Query: 173 NSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
+ G + ALI+ +A+ + +A+ F+KM+ +P + +N LL A +
Sbjct: 173 SKGLLTQETF--ALISRRYA---RARKVKEAVETFEKMEKFG-LQPVLSDFNRLLDALCK 226
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+R+V++ +F ++ + PDI +Y +++ +G+ + ++ V MK +PD +T
Sbjct: 227 SRHVERAQEVFDKMKDRKFRPDIKSYTILLEGWGQEQNLLRLDEVYREMKDEGFEPDAVT 286
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+ +LI+++ K + +D ++F + +K PT + ++I G R +A F++
Sbjct: 287 YGILINAHCKARRYDAAVELFHKMEANKCMPTPHIYCTLINGLGSERRLTEALQFFERSK 346
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
A +TP TY ++ Y + A I DE+ K G + T + +L
Sbjct: 347 ASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVGPQTRTYDIILHHLIKARRTK 406
Query: 413 EADLLFEN-SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
EA +F+ S G P STY+++ + + ++ ++ M+ G++P F
Sbjct: 407 EAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEERVDMALRVWDEMKAKGVLPGMHMF 463
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 18/212 (8%)
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N LI++ GK + F KM + M SK T TF + Y +AR +A F+KM
Sbjct: 148 YNALIEALGKIKQF-KMIWNLVNDMRSKGLLTQETFALISRRYARARKVKEAVETFEKME 206
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELS--KLGKDMKVSTLNAMLEAYCMNGL 410
P + ++ +V RA+E+FD++ K D+K T+ +LE +
Sbjct: 207 KFGLQPVLSDFNRLLDALCKSRHVERAQEVFDKMKDRKFRPDIKSYTI--LLEGWGQEQN 264
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP------- 463
D ++ + G PD+ TY +L A+ KA + +L +ME N +P
Sbjct: 265 LLRLDEVYREMKDEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPTPHIYCT 324
Query: 464 ------NKRFFLEALETFSSSLAGSQSGSAKT 489
++R EAL+ F S A + A T
Sbjct: 325 LINGLGSERRLTEALQFFERSKASGFTPEAPT 356
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 138/316 (43%), Gaps = 5/316 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + + G+ A+ LF++M C P Y LI A + K +AL F
Sbjct: 267 YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEAL----NLF 322
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+MK + C+PN+ TY +L+ + +D+ + E+ E L P + TYN ++D Y K
Sbjct: 323 NEMKE-KGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCK 381
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
GMI + +L M+SN C P+ T+N LI K++ K + ++ K P+L T
Sbjct: 382 EGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLIT 441
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+NS+I K A + M P TY I V A +FD +
Sbjct: 442 YNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVK 501
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G A+++ YC G A L E N P+S TY +L + K +
Sbjct: 502 AKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMK 561
Query: 448 LVQKLLKRMEQNGIVP 463
L+ +M G+ P
Sbjct: 562 EASSLVAKMLTMGVKP 577
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 144/324 (44%), Gaps = 11/324 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT Y+ LI + A +F M GC+ + Y LI H +A + +A
Sbjct: 228 DTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLI----HGLCEAGRINEA 283
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACA-QARNVDQVNALFKELHESILAPDIYTYNGVM 262
L F M + C P + TY +L+ A + R V+ +N LF E+ E P+++TY ++
Sbjct: 284 LKLFADMTE-DNCCPTVRTYTVLIYALSGSGRKVEALN-LFNEMKEKGCEPNVHTYTVLI 341
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D K + E +LS M P ++T+N LID Y K D ++ + +
Sbjct: 342 DGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCG 401
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAR 380
P T+N +I K R KA + KM K +PS ITY +I +G C +++ A
Sbjct: 402 PNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLI--HGQCKVNDLESAY 459
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ +++ G T + ++ C G EA LF++ GV + Y L Y
Sbjct: 460 RLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGY 519
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
K ++ LL+RM + +PN
Sbjct: 520 CKVGKIDVAYSLLERMLNDACLPN 543
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 152/386 (39%), Gaps = 41/386 (10%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L L S + ++ L +F M K++ + Y+ LI + K+ + A + SEM
Sbjct: 304 VLIYALSGSGRKVEALNLFNEM-KEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSE 362
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G P YNALI + K + A M+ C PN TYN L+ +
Sbjct: 363 KGLIPSVVTYNALIDGYC----KEGMIDDAFEILDLMES-NSCGPNTRTYNELICGLCKK 417
Query: 234 RNVDQVNALFKE-----------------------------------LHESILAPDIYTY 258
R V + AL + ++E+ L PD +TY
Sbjct: 418 RKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTY 477
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
+ +D K G ++E ++ +K+ K + + + LID Y K D + + +++
Sbjct: 478 SVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLN 537
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
P T+N +I K + +A + KM M P+ +TY +I
Sbjct: 538 DACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDH 597
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A ++F+ + LG V T A L AY G+ E D + + G+ PD TY +L
Sbjct: 598 ALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLID 657
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPN 464
Y + + LK M G P+
Sbjct: 658 GYARLGLTHRAFDFLKCMVDTGCKPS 683
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 142/335 (42%), Gaps = 13/335 (3%)
Query: 135 MQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR 194
+ + + D YS I + K+G+ A LF ++ G + + +Y ALI +
Sbjct: 464 LMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYC--- 520
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
K + A ++M + C PN TYN+L+ + + + + ++L ++ + P
Sbjct: 521 -KVGKIDVAYSLLERMLN-DACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPT 578
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
+ TY ++ K+G V + M S +PD+ T+ + +Y + ++++ V
Sbjct: 579 VVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIA 638
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
+ P L T+ +I Y + L +A + M PS +I
Sbjct: 639 KMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIK------ 692
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL-LFENSHNMGVTPDSSTY 433
N+S + + S++G D VS +N++ A L E L LFE G T D S Y
Sbjct: 693 NLSHENRMKETRSEIGID-SVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIY 751
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
L + + E Q L+ M++ G+ P++ +
Sbjct: 752 GALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIY 786
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 121/272 (44%), Gaps = 2/272 (0%)
Query: 203 ALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
L F+KM G + KP + YN +L + ++ +D++ ++ EL + ++P+IYT+N
Sbjct: 140 VLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNA 199
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
+++ Y K G + E E S++ PD T+ LI + + + D +VF +
Sbjct: 200 MVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+ ++ ++I +A +A +F MT P+ TY +I A
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEAL 319
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+F+E+ + G + V T +++ C EA + G+ P TY L Y
Sbjct: 320 NLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGY 379
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
K M + ++L ME N PN R + E +
Sbjct: 380 CKEGMIDDAFEILDLMESNSCGPNTRTYNELI 411
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 136/330 (41%), Gaps = 40/330 (12%)
Query: 157 KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERC 216
K G A S++ +G PD Y +LI H R+K A + KG C
Sbjct: 206 KIGNVVEAELYASKIVQAGLHPDTFTYTSLILGH--CRNKGVDNAYEVFLIMPQKG---C 260
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+ N V+Y L+ +A +++ LF ++ E P + TY ++ A +G E +
Sbjct: 261 QRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALN 320
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+ + MK C+P++ T+ +LID K D+ ++ + P++ T+N++I Y
Sbjct: 321 LFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYC 380
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
K + A + M + P+ TY +I G C + R++ ++
Sbjct: 381 KEGMIDDAFEILDLMESNSCGPNTRTYNELIC--GLC----KKRKVHKAMA--------- 425
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
LN MLE ++P TY L K N E +LL M
Sbjct: 426 LLNKMLER--------------------KLSPSLITYNSLIHGQCKVNDLESAYRLLSLM 465
Query: 457 EQNGIVPNKRFFLEALETFSSSLAGSQSGS 486
+NG+VP++ + ++T ++G+
Sbjct: 466 NENGLVPDQWTYSVFIDTLCKEGRVEEAGT 495
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 116/244 (47%), Gaps = 7/244 (2%)
Query: 226 LLRACAQARNVDQVNALFKELH---ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
++++C +V V +F++++ E P + YN ++ + K +I EM++V +
Sbjct: 127 MIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELL 186
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
+NQ P+I TFN +++ Y K + E ++ + P T+ S+I+ + + +
Sbjct: 187 NNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVD 246
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNA 400
A VF M + ++Y +I +G C+ ++ A ++F ++++ V T
Sbjct: 247 NAYEVFLIMPQKGCQRNEVSYTNLI--HGLCEAGRINEALKLFADMTEDNCCPTVRTYTV 304
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
++ A +G EA LF G P+ TY +L K N + +K+L M + G
Sbjct: 305 LIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364
Query: 461 IVPN 464
++P+
Sbjct: 365 LIPS 368
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 81/205 (39%), Gaps = 26/205 (12%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI---------- 187
+ + D Y+ LI + G T A M ++GC+P + + LI
Sbjct: 642 EEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMK 701
Query: 188 ----------TAHLHTRDKAKALAKALGYFQKMKGMER-----CKPNIVTYNILLRACAQ 232
+++++ D A + K L Y +K E+ C ++ Y L+ Q
Sbjct: 702 ETRSEIGIDSVSNVNSVDIAD-VWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQ 760
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+++ L + E ++P YN ++D K G+ E ++ M N P + +
Sbjct: 761 QERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLES 820
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLM 317
+ LL+ + +K + VF L+
Sbjct: 821 YKLLVCGLYIEGSNEKAKAVFHGLL 845
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 166/349 (47%), Gaps = 16/349 (4%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
KS L++FR M+ +R A YS +I + K G A+ LF+EM G + D
Sbjct: 221 KSGNTALALDLFRKME-ERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADV 279
Query: 181 SVYNALITAHLHT---RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
Y+++I + D AK L + +G PN+VT++ L+ + +
Sbjct: 280 VAYSSIIGGLCNDGRWDDGAKMLREMIG--------RNIIPNVVTFSALIDVFVKEGKLL 331
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ L+ E+ +APD TY+ ++D + K + E +L M S C+P+I+T+++LI
Sbjct: 332 EAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILI 391
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+SY K + D ++F + T+N+++ + ++ A+ +FQ+M +
Sbjct: 392 NSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVP 451
Query: 358 PSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
PS +TY I + G CDN + +A EIF+++ K + + N ++ C +A
Sbjct: 452 PSVVTYG--ILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAW 509
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
LF + GV PD TY ++ K L ++M+++G P+
Sbjct: 510 SLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPS 558
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 145/350 (41%), Gaps = 49/350 (14%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L +W ++ R M R I + +S LI V K+G+ A L++EM G P
Sbjct: 289 LCNDGRWDDGAKMLREMI-GRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAP 347
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNV 236
D Y++LI K L +A M KG C+PNIVTY+IL+ + +A+ V
Sbjct: 348 DTITYSSLIDGFC----KENRLGEANQMLDLMVSKG---CEPNIVTYSILINSYCKAKRV 400
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
D LF E+ L D TYN ++ + ++G + + + M S P ++T+ +L
Sbjct: 401 DNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGIL 460
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
+D K ++F+ + S+ MI+ G
Sbjct: 461 LDGLCDNGELQKALEIFEKMQKSR----------MILGIG-------------------- 490
Query: 357 TPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
Y II +G C+ V A +F LS G V T N M+ C G +EA
Sbjct: 491 -----IYNIII--HGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEA 543
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
D+LF G P TY +L +A+ + +L++ M+ G +
Sbjct: 544 DMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAAD 593
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 145/324 (44%), Gaps = 11/324 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA-HLHTRDKAKALAK 202
+T +S LI +G+ A+ L M RP+ N LI L R + +
Sbjct: 138 NTITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGR-----VTE 192
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
AL +M C+ N +TY +L ++ N LF+++ E + + Y+ V+
Sbjct: 193 ALVLIDRMVKYG-CEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVI 251
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D+ K+G + + S+ + M+ K D++ ++ +I +D ++ + ++
Sbjct: 252 DSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNII 311
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAR 380
P + TF+++I + K +A+ ++ +M A P ITY +I G+C + + A
Sbjct: 312 PNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLID--GFCKENRLGEAN 369
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
++ D + G + + T + ++ +YC LF + G+ D+ TY L + +
Sbjct: 370 QMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGF 429
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
++ + ++L + M G+ P+
Sbjct: 430 CQSGKLNVAKELFQEMVSRGVPPS 453
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/306 (19%), Positives = 133/306 (43%), Gaps = 9/306 (2%)
Query: 175 GCRPDPSVYNALITAH-LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQ 232
G P+ ++ LI L R +++A+ +M M+ +PN+VT N L+ C +
Sbjct: 134 GFEPNTITFSTLINGFCLEGR-----VSEAVALVDRMVEMKY-RPNVVTVNTLINGLCLK 187
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
R + + + + + A +I TY V++ K+G + +M+ K ++
Sbjct: 188 GRVTEALVLIDRMVKYGCEANEI-TYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQ 246
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
++++IDS K D +F + K + ++S+I + ++M
Sbjct: 247 YSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMI 306
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
P+ +T+ +I ++ + A+E+++E+ G T +++++ +C
Sbjct: 307 GRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLG 366
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
EA+ + + + G P+ TY +L +Y KA + +L + G+V + + +
Sbjct: 367 EANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLV 426
Query: 473 ETFSSS 478
+ F S
Sbjct: 427 QGFCQS 432
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 6/149 (4%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L + + + LE+F MQK R I GIY+ +I M + A LF +
Sbjct: 459 ILLDGLCDNGELQKALEIFEKMQKSRM-ILGIGIYNIIIHGMCNASKVDDAWSLFCSLSV 517
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G +PD YN +I K +L++A F+KMK + C P+ TYNIL+RA
Sbjct: 518 KGVKPDVLTYNVMIGGLC----KKGSLSEADMLFRKMKE-DGCAPSDCTYNILIRAHLGG 572
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVM 262
V L +E+ A D T V+
Sbjct: 573 SGVISSVELIEEMKMRGFAADASTIKMVV 601
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 119/275 (43%), Gaps = 3/275 (1%)
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+A+ F+ M R P+++ ++ L A A+ + D V KE+ + + ++YT N +
Sbjct: 52 EAIDLFESMI-QSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIM 110
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
++ + + + SV+ R +P+ ITF+ LI+ + + + ++ K
Sbjct: 111 INCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMKY 170
Query: 322 KPTLPTFNSMIINYG-KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P + T N++I K R+ +A + +M + ITY ++ N + A
Sbjct: 171 RPNVVTVNTLINGLCLKGRVT-EALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALAL 229
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
++F ++ + V + ++++ C +G +A LF G+ D Y +
Sbjct: 230 DLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGL 289
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ K+L+ M I+PN F ++ F
Sbjct: 290 CNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVF 324
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 102/242 (42%), Gaps = 14/242 (5%)
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTY-----NGVMDAYGKNGMIKEMESVLSRM 281
L+A + +D+ LH S ++ +Y NG++D + E + M
Sbjct: 6 LKASNFTQIIDKGTLRISLLHYSCISEAKVSYKERLRNGIVDIK-----VNEAIDLFESM 60
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
++ P +I F+ L + +R+ +D + K + + + + T N MI + + R
Sbjct: 61 IQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNIMINCFCRKRKL 120
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLN 399
A V + + P+ IT+ +I G+C VS A + D + ++ V T+N
Sbjct: 121 LFAFSVVGRALKFGFEPNTITFSTLIN--GFCLEGRVSEAVALVDRMVEMKYRPNVVTVN 178
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
++ C+ G TEA +L + G + TY + K+ L L ++ME+
Sbjct: 179 TLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEER 238
Query: 460 GI 461
I
Sbjct: 239 SI 240
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 100/247 (40%), Gaps = 12/247 (4%)
Query: 221 VTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS- 279
V+Y LR V++ LF+ + +S P + ++ + A + KE + VL
Sbjct: 35 VSYKERLRNGIVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARR---KEYDLVLGF 91
Query: 280 --RMKSNQCKPDIITFNLLIDSYG-KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
M N + ++ T N++I+ + KR+ V ++L E P TF+++I +
Sbjct: 92 CKEMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFE-PNTITFSTLINGFC 150
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMK 394
+A + +M MKY P+ +T +I G C V+ A + D + K G +
Sbjct: 151 LEGRVSEAVALVDRMVEMKYRPNVVTVNTLIN--GLCLKGRVTEALVLIDRMVKYGCEAN 208
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
T +L C +G A LF + Y ++ + K + L
Sbjct: 209 EITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFN 268
Query: 455 RMEQNGI 461
ME GI
Sbjct: 269 EMEMKGI 275
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 147/319 (46%), Gaps = 6/319 (1%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
IY+ L+A++ K A+ LF EMR+ CRPD Y LI KA L +A +
Sbjct: 263 IYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVFTYTELIRG----LGKAGRLDEAYNF 318
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA-Y 265
F +M+ E C+P+ V N ++ +A +D LF+E+ P + TYN ++ A +
Sbjct: 319 FHEMR-REGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALF 377
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ E+ S RMK + P T+++LID + K +K + + + P
Sbjct: 378 ESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCP 437
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
+ S+I GKA+ A +FQ++ + S Y +I G + A ++FDE
Sbjct: 438 AAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDE 497
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+++LG V NA++ G+ EA + G PD ++Y ++ A K
Sbjct: 498 MNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGG 557
Query: 446 KELVQKLLKRMEQNGIVPN 464
+ +L M+Q+ I P+
Sbjct: 558 PDRAMGMLCNMKQSAIKPD 576
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 155/336 (46%), Gaps = 6/336 (1%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E++ M + DT YS LI+ K G+ A+WL +EM+++G +P +Y L+ A
Sbjct: 211 ELYNEMSNEGQCFPDTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLM-A 269
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
L D ALG F++M+ + C+P++ TY L+R +A +D+ F E+
Sbjct: 270 LLFKLDNVHG---ALGLFEEMRH-QYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRRE 325
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS-YGKRQAFDK 308
PD N +++ GK G + + + M++ +C P ++T+N +I + + + +
Sbjct: 326 GCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSE 385
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+ F+ + S P+ T++ +I + K KA + ++M + P Y +I
Sbjct: 386 ISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLID 445
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
G A E+F EL + M++ G +A LF+ + +G TP
Sbjct: 446 ALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTP 505
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ Y L +A M + ++RM+ +G +P+
Sbjct: 506 NVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPD 541
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 164/348 (47%), Gaps = 7/348 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L L K D L +F M+ Q + D Y++LI +GK G+ A F EMR
Sbjct: 266 MLMALLFKLDNVHGALGLFEEMRHQ-YCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRR 324
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
GCRPD + N +I + KA L A+ F++M+ + RC P++VTYN +++A ++
Sbjct: 325 EGCRPDTVLMNNMI----NFLGKAGRLDDAIKLFEEMETL-RCIPSVVTYNTIIKALFES 379
Query: 234 RN-VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
++ V ++++ F+ + S ++P +TY+ ++D + K ++ +L M P
Sbjct: 380 KSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAA 439
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+ LID+ GK + +D ++F+ L + + + MI + GKA A +F +M
Sbjct: 440 YCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMN 499
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ TP+ Y +++ + A + G +++ N +L A G P
Sbjct: 500 RLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPD 559
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
A + N + PD+ +Y + A + A M E KL+K M G
Sbjct: 560 RAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIG 607
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 153/385 (39%), Gaps = 46/385 (11%)
Query: 115 LFEELGKSDKWLQC-LEVFRWMQKQRWYIADTGIY------------------------- 148
L E+ K+D + ++ FRW ++R Y DT Y
Sbjct: 88 LVREVMKTDVGVSVKMQFFRWAARKRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVR 147
Query: 149 -----------SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
S +I ++G A+ +F +++ C+P YN++I +H +
Sbjct: 148 NPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYE 207
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
K + +M +C P+ VTY+ L+ A + D L E+ ++ + P
Sbjct: 208 KVHE----LYNEMSNEGQCFPDTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKI 263
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y +M K + + M+ C+PD+ T+ LI GK D+ F +
Sbjct: 264 YTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMR 323
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
+P N+MI GKA A +F++M ++ PS +TY II ++ S
Sbjct: 324 REGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNTIIK--ALFESKS 381
Query: 378 RAREI---FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
R EI F+ + G T + +++ +C +A +L E G P + Y
Sbjct: 382 RVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYC 441
Query: 435 LLYKAYTKANMKELVQKLLKRMEQN 459
L A KA +L +L + +++N
Sbjct: 442 SLIDALGKAKRYDLANELFQELKEN 466
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 120/252 (47%), Gaps = 17/252 (6%)
Query: 130 EVFRWMQKQRWYIADTGI------YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
E+ W ++ + +GI YS LI K +T AM L EM G P P+ Y
Sbjct: 385 EISSWFERMK----GSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAY 440
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV-TYNILLRACAQARNVDQVNAL 242
+LI A KAK A FQ++K E C + Y ++++ +A +D L
Sbjct: 441 CSLIDA----LGKAKRYDLANELFQELK--ENCGSSSARVYAVMIKHLGKAGRLDDAVDL 494
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
F E++ P++Y YN +M + GM+ E + + RM+ + C PDI ++N+++++ K
Sbjct: 495 FDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAK 554
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
D+ + ++ S KP ++N+++ A + +A + ++M A+ + IT
Sbjct: 555 TGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLIT 614
Query: 363 YECIITMYGYCD 374
Y I+ G D
Sbjct: 615 YSSILEAIGKVD 626
>gi|255552808|ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543458|gb|EEF44989.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 139/270 (51%), Gaps = 9/270 (3%)
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
++L + + R P++ YN++LR +A+ D + LF E+ + L+PD YTY+ +
Sbjct: 116 RSLALLDWINEVARYSPSVFAYNVVLRNVLRAKKWDLAHGLFDEMRQRALSPDRYTYSTL 175
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ ++GK GM E L +M+ ++ D++ ++ LI+ K + K +F L S
Sbjct: 176 ITSFGKAGMFDESLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGI 235
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P L +NSMI +GKARL +A + +M + P ++Y ++++Y + A
Sbjct: 236 TPDLVAYNSMINVFGKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALS 295
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+F E+++ + + T N M++ Y + EAD LF + MG+ P+ +Y L K Y
Sbjct: 296 VFAEMNEANCSLDLMTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYG 355
Query: 442 KA-------NMKELVQKLLKRMEQNGIVPN 464
+A ++ L+Q+ K +EQN + N
Sbjct: 356 EAELFGEAIHLFRLMQR--KEIEQNVVTYN 383
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 163/343 (47%), Gaps = 6/343 (1%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
++ KW +F M +QR D YS LI GK G +++ +M D
Sbjct: 146 RAKKWDLAHGLFDEM-RQRALSPDRYTYSTLITSFGKAGMFDESLFWLQQMEQDRVSGDL 204
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
+Y+ LI D +KA++ F ++K P++V YN ++ +AR +
Sbjct: 205 VLYSNLIELSRKLCDYSKAIS----IFMRLKR-SGITPDLVAYNSMINVFGKARLFREAR 259
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
L E+ E + PD +Y+ ++ Y +N E SV + M C D++T N++ID Y
Sbjct: 260 MLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEMNEANCSLDLMTCNIMIDVY 319
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
G+ + +++F S+ +P + ++N+++ YG+A L G+A ++F+ M + +
Sbjct: 320 GQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNV 379
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
+TY +I +YG +A + E+ K G + T + ++ + G A +LF+
Sbjct: 380 VTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAMLFQK 439
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
+ GV D Y+ + AY +A + ++LL ++ I+P
Sbjct: 440 LRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHDLKCPDIIP 482
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 158/325 (48%), Gaps = 6/325 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L GK+ + + L + M++ R D +YS LI + K A+ +F ++ S
Sbjct: 175 LITSFGKAGMFDESLFWLQQMEQDR-VSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRS 233
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G PD YN++I KA+ +A +M+ + P+ V+Y+ LL +
Sbjct: 234 GITPDLVAYNSMINVF----GKARLFREARMLVHEMREVG-VLPDTVSYSTLLSVYVENE 288
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ ++F E++E+ + D+ T N ++D YG+ M+KE + + M+ +P+++++N
Sbjct: 289 KFVEALSVFAEMNEANCSLDLMTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYN 348
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
L+ YG+ + F + +F+ + + + + T+N+MI YGK+ KA + Q+M
Sbjct: 349 TLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKR 408
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P+ ITY II+++G + RA +F +L G ++ M+ AY GL A
Sbjct: 409 GIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHA 468
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKA 439
L + + P + K+L +A
Sbjct: 469 KRLLHDLKCPDIIPRDTAIKILARA 493
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 149/357 (41%), Gaps = 37/357 (10%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ +I V GK R A L EMR G PD Y+ L++ ++ + +A
Sbjct: 238 DLVAYNSMINVFGKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVEN----EKFVEA 293
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L F +M C +++T NI++ Q V + + LF + + + P++ +YN ++
Sbjct: 294 LSVFAEMNE-ANCSLDLMTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLK 352
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
YG+ + E + M+ + + +++T+N +I YGK +K + + + +P
Sbjct: 353 VYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEP 412
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T++++I +GKA +A +FQK+ + + Y+ +I Y V+ A+ +
Sbjct: 413 NAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLL 472
Query: 384 DELS-------------------------------KLGKDMKVSTLNAMLEAYCMNGLPT 412
+L G+ +S M+E + N P
Sbjct: 473 HDLKCPDIIPRDTAIKILARAGRIEEATWVFRQAFDAGEVKDISVFRCMIELFSRNKRPA 532
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM-EQNGIVPNKRFF 468
+FE G PDS L+ AY K E + + M E+ + P++ F
Sbjct: 533 NVVEVFEKMRGAGYFPDSDVIALVLNAYGKLREFEKADAVYREMQEEECVFPDEVHF 589
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 118/245 (48%), Gaps = 13/245 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS +I++ GK G+ A LF ++R+SG D +Y +I A+ ++A +A A
Sbjct: 417 YSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAY----ERAGLVAHAKRLL 472
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+K C P+I+ + ++ A+A +++ +F++ ++ DI + +++ + +
Sbjct: 473 HDLK----C-PDIIPRDTAIKILARAGRIEEATWVFRQAFDAGEVKDISVFRCMIELFSR 527
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP- 326
N + V +M+ PD L++++YGK + F+K + V++ + +E+ P
Sbjct: 528 NKRPANVVEVFEKMRGAGYFPDSDVIALVLNAYGKLREFEKADAVYREM--QEEECVFPD 585
Query: 327 -TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
M+ YG + E +F+K+ + + + ++Y + ++ A I +
Sbjct: 586 EVHFQMLSLYGARKDFIMVESLFEKLDSDPNINKKELHLVVASIYERQNRLNDASRIMNR 645
Query: 386 LSKLG 390
+SK G
Sbjct: 646 MSKEG 650
>gi|226499896|ref|NP_001150085.1| EMB2745 [Zea mays]
gi|195636584|gb|ACG37760.1| EMB2745 [Zea mays]
gi|414879767|tpg|DAA56898.1| TPA: EMB2745 [Zea mays]
Length = 410
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 142/323 (43%), Gaps = 9/323 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D + L+ V + G A +F M G P+ Y ALI + + A
Sbjct: 37 DVAACTALVHVCCQSGDVAEARRVFDVMPRLGVAPNEVTYTALINGYFVRGHREMGFA-- 94
Query: 204 LGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
F +M+ G+E PN+ TYN L+ + LF E+ + ++ +YN +
Sbjct: 95 --LFAEMRRDGVE---PNLYTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNIL 149
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ ++ +K+ + M+ +P I+TFNLLID YGK F + +
Sbjct: 150 IAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGL 209
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P++ T+N +I + + R +A F M P+ +TY +I + + + RA
Sbjct: 210 PPSVVTYNELICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFM 269
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ E+ K G ++ V + +L A CM G A LF++ GV P+S Y ++ Y
Sbjct: 270 MLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYG 329
Query: 442 KANMKELVQKLLKRMEQNGIVPN 464
+ +L+ M +NG++PN
Sbjct: 330 REGSSYKALRLIMEMRKNGLIPN 352
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 132/329 (40%), Gaps = 44/329 (13%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI +G + LF+EMR G P+ YN LI T + A F
Sbjct: 76 YTALINGYFVRGHREMGFALFAEMRRDGVEPNLYTYNCLIGEWCRTGE----FKSARLLF 131
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M KG+ N+V+YNIL+ + + LF+ + + P I T+N ++D Y
Sbjct: 132 DEMPVKGVVH---NVVSYNILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDGY 188
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
GK G + ++MK+ P ++T+N LI + + + + + F + PT
Sbjct: 189 GKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVRDIARAVRAFLDMKERGLAPTK 248
Query: 326 PTFNSMIINYGKAR--------------------------------LQGK---AEYVFQK 350
T+ +I + K ++GK A +FQ
Sbjct: 249 VTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQS 308
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M P+ + Y+ +I YG + +A + E+ K G V++ + C G
Sbjct: 309 MDLKGVKPNSVLYDMMIYGYGREGSSYKALRLIMEMRKNGLIPNVASYCLTIRLLCNEGK 368
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKA 439
EA+ L ++ + G+ + ++L A
Sbjct: 369 CQEAEALIDDMEHAGLQTSETICRILLDA 397
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 101/275 (36%), Gaps = 35/275 (12%)
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
T ++ R C A + L + A D+ ++ ++G + E V M
Sbjct: 5 TAAVVRRLCVAAEVRSALAVLARGTKSGDAALDVAACTALVHVCCQSGDVAEARRVFDVM 64
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK---- 337
P+ +T+ LI+ Y R + +F + +P L T+N +I + +
Sbjct: 65 PRLGVAPNEVTYTALINGYFVRGHREMGFALFAEMRRDGVEPNLYTYNCLIGEWCRTGEF 124
Query: 338 --ARL-------QG----------------------KAEYVFQKMTAMKYTPSFITYECI 366
ARL +G A +F+ M PS +T+ +
Sbjct: 125 KSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLL 184
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I YG ++ A F+++ G V T N ++ +C A F + G+
Sbjct: 185 IDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVRDIARAVRAFLDMKERGL 244
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
P TY +L A+ K N + +L ME+ G+
Sbjct: 245 APTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGL 279
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 69/163 (42%), Gaps = 5/163 (3%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+R Y+ LIA K+ + A + SEM +G D Y L LH
Sbjct: 240 KERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVL----LHALCM 295
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+ A FQ M ++ KPN V Y++++ + + + L E+ ++ L P++
Sbjct: 296 EGKMMHARKLFQSMD-LKGVKPNSVLYDMMIYGYGREGSSYKALRLIMEMRKNGLIPNVA 354
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
+Y + G +E E+++ M+ + +L+D+
Sbjct: 355 SYCLTIRLLCNEGKCQEAEALIDDMEHAGLQTSETICRILLDA 397
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 164/360 (45%), Gaps = 18/360 (5%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L K + L++F M + + D Y LI + K G T A+ M
Sbjct: 130 LIRGLCVEGKIGEALQLFDKMTGEGFQ-PDVLTYGTLINGLCKVGNTSTAIRFLRSMEQR 188
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRA-CA 231
CRP VY+ +I + K + L +AL F M KG+ PN TY+ L+ C
Sbjct: 189 NCRPTVVVYSTIIDSLC----KDRQLTEALSLFSDMLAKGIS---PNNFTYSSLIHGLCI 241
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ + + +H I+ PD T+N ++DA K GM+ + V+ M + KPD++
Sbjct: 242 LGHWKEAIRLFYAMIHRKIM-PDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVV 300
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
T+N L+D + R K VF +++ P++ ++ ++I Y K ++ KA +F++M
Sbjct: 301 TYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEM 360
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRARE---IFDELSKLGKDMKVSTLNAMLEAYCMN 408
+ P +TY +I +G C +V R R+ +F E+ G+ + T + + C N
Sbjct: 361 SQQGLIPDTVTYNTLI--HGLC-HVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKN 417
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
EA +L + + PD Y ++ +A E + L ++ G+ P+ R +
Sbjct: 418 HRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTY 477
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 148/330 (44%), Gaps = 9/330 (2%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
Y T ++ LI + +G+ A+ LF +M G +PD Y LI + + A+
Sbjct: 120 YQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAI 179
Query: 201 AKALGYFQKMKGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
+ ++ ME+ C+P +V Y+ ++ + + R + + +LF ++ ++P+ +TY
Sbjct: 180 -------RFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTY 232
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
+ ++ G KE + M + PD +TFN L+D+ K K V ++
Sbjct: 233 SSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQ 292
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
S KP + T+NS++ + GK VF M PS I+Y +I Y + +
Sbjct: 293 SDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDK 352
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A +F+E+S+ G T N ++ C G +A LF G PD TY++L+
Sbjct: 353 AMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFD 412
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
K + LLK +E + P+ +
Sbjct: 413 YLCKNHRLAEAMVLLKVIEGTNLDPDIHIY 442
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 138/339 (40%), Gaps = 53/339 (15%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
W + + +F M R + D ++ L+ + K+G A ++ M S +PD YN
Sbjct: 245 WKEAIRLFYAM-IHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYN 303
Query: 185 ALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNAL 242
+L+ H + + K + F M KG C P++++Y L+ + + +D+ L
Sbjct: 304 SLMDGHCLRSE----MGKTVNVFDTMVRKG---CVPSVISYTTLINGYCKIQIMDKAMGL 356
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
F+E+ + L PD TYN ++ G +++ ++ M PD++T+ +L D K
Sbjct: 357 FEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCK 416
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ + K + + P + ++
Sbjct: 417 NHRLAEAMVLLKVIEGTNLDPDIHIYS--------------------------------- 443
Query: 363 YECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
I M G C + AR++F +LS G V T M+ C GL EA LF
Sbjct: 444 ----IVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGE 499
Query: 421 SHNMGVTPDSSTYKLLYKAYTKAN----MKELVQKLLKR 455
G +P++ TY L+ + + + N +L Q++L R
Sbjct: 500 MDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSR 538
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 115/280 (41%), Gaps = 2/280 (0%)
Query: 186 LITAHLHTRD-KAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
+I+ H++ + AL F +M M R P+IV ++ LL + + ++ V +L+K
Sbjct: 20 MISHAFHSKSLNVNTIDDALSLFNRMLRM-RPPPSIVDFSKLLTSITRMKHYSTVLSLYK 78
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
++ + + YT N +++++ + SVL + +P TF LI
Sbjct: 79 QMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEG 138
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
+ Q+F + +P + T+ ++I K A + M P+ + Y
Sbjct: 139 KIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYS 198
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
II ++ A +F ++ G T ++++ C+ G EA LF +
Sbjct: 199 TIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHR 258
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ PD T+ L A K M ++ M Q+ + P+
Sbjct: 259 KIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPD 298
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 166/360 (46%), Gaps = 21/360 (5%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
LF G DK L K+ I D IY+ LI +KG +AM L +EM
Sbjct: 384 LFTRSGNLDKALMYFNSV----KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQ 439
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCK-PNIVTYNILLRACAQA 233
GC D YN + LH K K L +A F +M ER P+ T IL+ +
Sbjct: 440 GCAMDVVTYNTI----LHGLCKRKMLGEADKLFNEMT--ERALFPDSYTLTILIDGHCKL 493
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
N+ LF+++ E + D+ TYN ++D +GK G I + + + M S + P I++
Sbjct: 494 GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY 553
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
++L+++ + + +V+ ++ KPT+ NSMI Y ++ E +KM +
Sbjct: 554 SILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMIS 613
Query: 354 MKYTPSFITYECIITMYGYC--DNVSRA----REIFDELSKLGKDMKVSTLNAMLEAYCM 407
+ P I+Y +I YG+ +N+S+A +++ +E L D V T N++L +C
Sbjct: 614 EGFVPDCISYNTLI--YGFVREENMSKAFGLVKKMEEEQGGLVPD--VFTYNSILHGFCR 669
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
EA+++ GV PD STY + + + ++ M Q G P+ +F
Sbjct: 670 QNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDKF 729
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 166/352 (47%), Gaps = 16/352 (4%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L K K+ + EVF M + D+ Y L+ KKG +FS+MR+ P
Sbjct: 315 LCKHGKYERAKEVFAEMLRSGLS-PDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP 373
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNV 236
D ++++++ L TR + L KAL YF +K G+ P+ V Y IL++ + +
Sbjct: 374 DLVCFSSMMS--LFTR--SGNLDKALMYFNSVKEAGL---IPDNVIYTILIQGYCRKGMI 426
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
L E+ + A D+ TYN ++ K M+ E + + + M PD T +L
Sbjct: 427 SVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTIL 486
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
ID + K ++F+ + + + + T+N+++ +GK A+ ++ M + +
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 546
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK--VSTLNAMLEAYCMNGLPTEA 414
P+ I+Y ++ +++ A ++DE+ + K++K V N+M++ YC +G ++
Sbjct: 547 LPTPISYSILVNALCSKGHLAEAFRVWDEM--ISKNIKPTVMICNSMIKGYCRSGNASDG 604
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM--EQNGIVPN 464
+ E + G PD +Y L + + L+K+M EQ G+VP+
Sbjct: 605 ESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPD 656
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 181/404 (44%), Gaps = 19/404 (4%)
Query: 82 LVRVLMRSFSDKEPLVRTLNK-YVKVVRSEHCF-LLFEELGKSDKWLQCLEVFRWMQKQR 139
L+R++ RS + +V +L+ + ++ F LL ++ K + E F ++ +
Sbjct: 136 LLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKG 195
Query: 140 WYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKA 199
+ ++ + LI + + G LA ++ E+ SG + N ++ A L K +
Sbjct: 196 FTVSIDAC-NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNA-LCKDGKMEK 253
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
+ L Q+ KG+ P+IVTYN L+ A + +++ L + +P +YTYN
Sbjct: 254 VGTFLSQVQE-KGV---YPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYN 309
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
V++ K+G + + V + M + PD T+ L+ K+ + E+VF +
Sbjct: 310 TVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR 369
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VS 377
P L F+SM+ + ++ KA F + P + Y +I GYC +S
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQ--GYCRKGMIS 427
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
A + +E+ + G M V T N +L C + EAD LF + PDS T +L
Sbjct: 428 VAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILI 487
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
+ K + +L ++M++ KR L+ + T+++ L G
Sbjct: 488 DGHCKLGNLQNAMELFQKMKE------KRIRLDVV-TYNTLLDG 524
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 147/337 (43%), Gaps = 12/337 (3%)
Query: 130 EVFRWMQK---QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
EVF M + QR ++ Y+ LI + + G+ A+ LF++M C P Y L
Sbjct: 250 EVFLIMPQKGCQRNEVS----YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVL 305
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I A + K +AL F +MK + C+PN+ TY +L+ + +D+ + E+
Sbjct: 306 IYALSGSGRKVEAL----NLFNEMKE-KGCEPNVHTYTVLIDGLCKENKMDEARKMLSEM 360
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
E L P + TYN ++D Y K GMI + +L M+SN C P+ T+N LI K++
Sbjct: 361 SEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKV 420
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
K + ++ K P+L T+NS+I K A + M P TY
Sbjct: 421 HKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVF 480
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I V A +FD + G A+++ YC G A L E N
Sbjct: 481 IDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDAC 540
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
P+S TY +L + K + L+ +M G+ P
Sbjct: 541 LPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKP 577
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 144/324 (44%), Gaps = 11/324 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT Y+ LI + A +F M GC+ + Y LI H +A + +A
Sbjct: 228 DTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLI----HGLCEAGRINEA 283
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACA-QARNVDQVNALFKELHESILAPDIYTYNGVM 262
L F M + C P + TY +L+ A + R V+ +N LF E+ E P+++TY ++
Sbjct: 284 LKLFADMTE-DNCCPTVRTYTVLIYALSGSGRKVEALN-LFNEMKEKGCEPNVHTYTVLI 341
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D K + E +LS M P ++T+N LID Y K D ++ + +
Sbjct: 342 DGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCG 401
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAR 380
P T+N +I K R KA + KM K +PS ITY +I +G C +++ A
Sbjct: 402 PNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLI--HGQCKVNDLESAY 459
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ +++ G T + ++ C G EA LF++ GV + Y L Y
Sbjct: 460 RLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGY 519
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
K ++ LL+RM + +PN
Sbjct: 520 CKVGKIDVAYSLLERMLNDACLPN 543
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 154/352 (43%), Gaps = 8/352 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K +K + ++ M ++ I Y+ LI K+G A + M +
Sbjct: 339 VLIDGLCKENKMDEARKMLSEMS-EKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMES 397
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQ 232
+ C P+ YN LI K + + KA+ KM +ER P+++TYN L+ +
Sbjct: 398 NSCGPNTRTYNELICGLC----KKRKVHKAMALLNKM--LERKLSPSLITYNSLIHGQCK 451
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+++ L ++E+ L PD +TY+ +D K G ++E ++ +K+ K + +
Sbjct: 452 VNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVI 511
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+ LID Y K D + + +++ P T+N +I K + +A + KM
Sbjct: 512 YTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKML 571
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
M P+ +TY +I A ++F+ + LG V T A L AY G+
Sbjct: 572 TMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLE 631
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
E D + + G+ PD TY +L Y + + LK M G P+
Sbjct: 632 EVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPS 683
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 154/395 (38%), Gaps = 65/395 (16%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K + A+ IY+ LI K G+ +A L M N C P+ YN LI K
Sbjct: 501 KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLC----K 556
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
K + +A KM M KP +VTY IL+ + D +F + PD+
Sbjct: 557 EKKMKEASSLVAKMLTM-GVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVC 615
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TY + AY GM++E++ V+++M PD++T+ +LID Y + + K +
Sbjct: 616 TYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCM 675
Query: 317 MHSKEKPTLPTFNSMIIN-------------YGKARLQGKAEY-----VFQKMTAMKYTP 358
+ + KP+L + +I N G + EY +F+KM T
Sbjct: 676 VDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTI 735
Query: 359 SFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
Y +I G+C + + A+ + + + G N++L+ C G+ EA
Sbjct: 736 DVSIYGALIA--GFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVR 793
Query: 417 LFENSHNMGVTPDSSTYKLLYKA-----------------------YTKANMKELVQKLL 453
L + G+ P +YKLL Y + K L+ LL
Sbjct: 794 LVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLL 853
Query: 454 KR------------MEQNGIVPNK---RFFLEALE 473
KR ME+ G PN +E LE
Sbjct: 854 KRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGLE 888
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 121/272 (44%), Gaps = 2/272 (0%)
Query: 203 ALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
L F+KM G + KP + YN +L + ++ +D++ ++ EL + ++P+IYT+N
Sbjct: 140 VLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNA 199
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
+++ Y K G + E E S++ PD T+ LI + + + D +VF +
Sbjct: 200 MVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+ ++ ++I +A +A +F MT P+ TY +I A
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEAL 319
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+F+E+ + G + V T +++ C EA + G+ P TY L Y
Sbjct: 320 NLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGY 379
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
K M + ++L ME N PN R + E +
Sbjct: 380 CKEGMIDDAFEILDLMESNSCGPNTRTYNELI 411
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 145/364 (39%), Gaps = 57/364 (15%)
Query: 135 MQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR 194
+ + + D YS I + K+G+ A LF ++ G + + +Y ALI +
Sbjct: 464 LMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYC--- 520
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL-------- 246
K + A ++M + C PN TYN+L+ + + + + ++L ++
Sbjct: 521 -KVGKIDVAYSLLERMLN-DACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPT 578
Query: 247 -------------------------HESILA--PDIYTYNGVMDAYGKNGMIKEMESVLS 279
H L PD+ TY + AY GM++E++ V++
Sbjct: 579 VVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIA 638
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
+M PD++T+ +LID Y + + K ++ + KP+L + +I N
Sbjct: 639 KMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKN----- 693
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLN 399
MK T S I + + Y A ++F+++ + G + VS
Sbjct: 694 --------LSHENRMKETRSEIGIDSVSNTLEY----EIALKLFEKMVEHGCTIDVSIYG 741
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
A++ +C EA L + G++P Y L K + +L+ M +N
Sbjct: 742 ALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVEN 801
Query: 460 GIVP 463
G++P
Sbjct: 802 GLLP 805
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 136/330 (41%), Gaps = 40/330 (12%)
Query: 157 KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERC 216
K G A S++ +G PD Y +LI H R+K A + KG C
Sbjct: 206 KIGNVVEAELYASKIVQAGLHPDTFTYTSLILGH--CRNKGVDNAYEVFLIMPQKG---C 260
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+ N V+Y L+ +A +++ LF ++ E P + TY ++ A +G E +
Sbjct: 261 QRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALN 320
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+ + MK C+P++ T+ +LID K D+ ++ + P++ T+N++I Y
Sbjct: 321 LFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYC 380
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
K + A + M + P+ TY +I G C + R++ ++
Sbjct: 381 KEGMIDDAFEILDLMESNSCGPNTRTYNELIC--GLC----KKRKVHKAMA--------- 425
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
LN MLE ++P TY L K N E +LL M
Sbjct: 426 LLNKMLER--------------------KLSPSLITYNSLIHGQCKVNDLESAYRLLSLM 465
Query: 457 EQNGIVPNKRFFLEALETFSSSLAGSQSGS 486
+NG+VP++ + ++T ++G+
Sbjct: 466 NENGLVPDQWTYSVFIDTLCKEGRVEEAGT 495
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 116/244 (47%), Gaps = 7/244 (2%)
Query: 226 LLRACAQARNVDQVNALFKELH---ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
++++C +V V +F++++ E P + YN ++ + K +I EM++V +
Sbjct: 127 MIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELL 186
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
+NQ P+I TFN +++ Y K + E ++ + P T+ S+I+ + + +
Sbjct: 187 NNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVD 246
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNA 400
A VF M + ++Y +I +G C+ ++ A ++F ++++ V T
Sbjct: 247 NAYEVFLIMPQKGCQRNEVSYTNLI--HGLCEAGRINEALKLFADMTEDNCCPTVRTYTV 304
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
++ A +G EA LF G P+ TY +L K N + +K+L M + G
Sbjct: 305 LIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364
Query: 461 IVPN 464
++P+
Sbjct: 365 LIPS 368
>gi|302794005|ref|XP_002978767.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
gi|300153576|gb|EFJ20214.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
Length = 521
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 154/337 (45%), Gaps = 15/337 (4%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E+F MQK R Y + + V+ + R A LF ++ C P+ YN +I
Sbjct: 160 ELFVQMQK-RGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVI 218
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ KA +KA ++ M+ C PNI T+ L+ A A+ + F +L E
Sbjct: 219 Y----GKAGEPSKAEMLYRSMR-RAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEF 273
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
PD Y YN +M+AY + G + M+ N C PD ++ N+LI++YG+ ++
Sbjct: 274 DYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDA 333
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
E++FKS+ + P L + ++ Y +A +AE + M P + Y +I
Sbjct: 334 EKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNALINA 393
Query: 370 YGYCDNVSRAREIFDELSKLGKDM------KVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
YG R ++ L+K+ K + T N +++ Y G +A+ LF+
Sbjct: 394 YGVS---GRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPKAEELFQGLAR 450
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+ + PD++T+ L Y K + +LK+M ++G
Sbjct: 451 LKLVPDATTWTALMGGYAKKKLYRKCTSILKKMLESG 487
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 164/374 (43%), Gaps = 35/374 (9%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
W + ++ W+ + + D G Y+ LI GK A F+ M+ + C P+ +
Sbjct: 84 WPRVTQMCEWVLQGTAFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFG 143
Query: 185 ALITAH-------------------------------LHTRDKAKALAKALGYFQKMKGM 213
LI + LH + AK +A F+ ++
Sbjct: 144 VLINGYRLAGSFEKAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKY 203
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
E C+PNI TYN ++ +A + L++ + ++ P+I T+ +M+A+ + G+ +E
Sbjct: 204 E-CEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYRE 262
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
E +++ KPD +N L+++Y + + ++F+++ + P + N +I
Sbjct: 263 AERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILIN 322
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
YG+A L AE +F+ M + ++P+ + +++ Y V A E+ + + G
Sbjct: 323 AYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKP 382
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFEN---SHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
NA++ AY ++G + + L S + PD TY L + Y +A +
Sbjct: 383 DTLIYNALINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPKAE 442
Query: 451 KLLKRMEQNGIVPN 464
+L + + + +VP+
Sbjct: 443 ELFQGLARLKLVPD 456
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 148/308 (48%), Gaps = 11/308 (3%)
Query: 69 KRGRKSEELESKELVRVL--MRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWL 126
KRG L + VL + + E L R L KY + + GK+ +
Sbjct: 167 KRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYGKAGEPS 226
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ ++R M++ + ++ L+ ++G R A F +++ +PD YNAL
Sbjct: 227 KAEMLYRSMRRAMC-PPNICTFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNAL 285
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
+ A+ + + A AL FQ M+ C P+ V++NIL+ A +A + +FK +
Sbjct: 286 MEAY----SQGGSPAGALEIFQTMQ-RNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSM 340
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
+ +P++ + ++ AY + G ++E E ++S M+ + KPD + +N LI++YG
Sbjct: 341 QSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNALINAYGVSGRH 400
Query: 307 DKMEQVFKSLMHS---KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
+ ME + ++ S + KP + T+N++I Y +A KAE +FQ + +K P T+
Sbjct: 401 EDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPKAEELFQGLARLKLVPDATTW 460
Query: 364 ECIITMYG 371
++ Y
Sbjct: 461 TALMGGYA 468
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 8/169 (4%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT---RDKAKALAKALGYF 207
L++ + G+ A L S M G +PD +YNALI A+ + D LAK +
Sbjct: 355 LLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNALINAYGVSGRHEDMEALLAKMVKSS 414
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K + KP+I TYN L++ AQA + + LF+ L L PD T+ +M Y K
Sbjct: 415 SK-----QTKPDIGTYNTLIQVYAQAGFIPKAEELFQGLARLKLVPDATTWTALMGGYAK 469
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+ ++ S+L +M + C+ D +T +L + + +++ Q+ +SL
Sbjct: 470 KKLYRKCTSILKKMLESGCRADAVTARVLFSACRSPEQVEQVTQLMESL 518
>gi|168039319|ref|XP_001772145.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676476|gb|EDQ62958.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 313
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 139/297 (46%), Gaps = 41/297 (13%)
Query: 130 EVFRWMQ-KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
+VF W + K RW + + Y+K+I+ G+ Q +LA LF EM G + YNALI
Sbjct: 1 QVFNWKKSKLRWEV-NPKEYAKMISFAGRINQPQLAADLFDEMEKRGIKKTAVSYNALI- 58
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
H+ + KAL F+ MK C+P +VTYN L+ ++ +++ +F + E
Sbjct: 59 ---HSYGRNNEPQKALQLFEYMKVTVDCQPTLVTYNTLISMYSRMGATEEMKKIFLDCTE 115
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
+ PD +TYN ++ Y + G + EME + +++ + D+IT+N LI Y + A DK
Sbjct: 116 AEFVPDRHTYNALIWGYMRAGQLNEMEVTFNELQAKKFNADVITYNALIIGYARANAVDK 175
Query: 309 MEQVFKSL-----------MHS---------------------KEKPTL---PTFNSMII 333
ME V S+ +H+ K+ + T+N +I
Sbjct: 176 MEVVLSSMQAVGIPINTMALHALIMAYSRAGTYDRLAKTMEVVKDAGWMLQPATYNILIS 235
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
YGK K E F++M PSF T++ +I Y DN ++ I D + K G
Sbjct: 236 EYGKVGYLDKMEQAFREMMNASVKPSFETFQYMINAYEAADNETQVDRILDLMRKAG 292
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 114/256 (44%), Gaps = 8/256 (3%)
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK-SNQCKPDIITFNLLIDSY 300
LF E+ + + +YN ++ +YG+N ++ + MK + C+P ++T+N LI Y
Sbjct: 38 LFDEMEKRGIKKTAVSYNALIHSYGRNNEPQKALQLFEYMKVTVDCQPTLVTYNTLISMY 97
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
+ A ++M+++F ++ P T+N++I Y +A + E F ++ A K+
Sbjct: 98 SRMGATEEMKKIFLDCTEAEFVPDRHTYNALIWGYMRAGQLNEMEVTFNELQAKKFNADV 157
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
ITY +I Y + V + + + +G + L+A++ AY G E
Sbjct: 158 ITYNALIIGYARANAVDKMEVVLSSMQAVGIPINTMALHALIMAYSRAGTYDRLAKTMEV 217
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLA 480
+ G +TY +L Y K + +++ + M + P + ETF +
Sbjct: 218 VKDAGWMLQPATYNILISEYGKVGYLDKMEQAFREMMNASVKP-------SFETFQYMIN 270
Query: 481 GSQSGSAKTDLTRSLS 496
++ +T + R L
Sbjct: 271 AYEAADNETQVDRILD 286
>gi|326487476|dbj|BAJ89722.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 805
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 146/316 (46%), Gaps = 5/316 (1%)
Query: 149 SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQ 208
S +IA G+ G A+ F +++ G P YNAL L KA +AL +
Sbjct: 258 STVIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNAL----LQVFGKAGNYTEALRVLR 313
Query: 209 KMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
+M+ CKP+ VTYN L + A+A + + L P+ +TYN +M AYG
Sbjct: 314 EMEDAG-CKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKGLLPNTFTYNTIMTAYGNA 372
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
G + E ++ RMK N P T+NL++ GK+ F M ++ + S P T+
Sbjct: 373 GKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGCTPNRVTW 432
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
N+++ GK ++ V + M + K TY +I YG C + + A +++DE++
Sbjct: 433 NTLLAVCGKRGMESYVTRVLEGMKSCKVELCRDTYNTLICAYGRCGSRANAFKMYDEMTA 492
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
G ++T NA+L G T A + + G P+ +Y LL + + K
Sbjct: 493 AGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSYSLLLQCHAKGGNAAG 552
Query: 449 VQKLLKRMEQNGIVPN 464
++ + K + Q I P+
Sbjct: 553 IEAIEKEVYQGNIFPS 568
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 170/358 (47%), Gaps = 25/358 (6%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
G + K + L +F M+K +I T Y+ ++ ++GKK + + + EM SGC P+
Sbjct: 370 GNAGKVDEALALFDRMKKN-GFIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGCTPN 428
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV--TYNILLRACAQARNVD 237
+N L+ A R + + L +GM+ CK + TYN L+ CA R
Sbjct: 429 RVTWNTLL-AVCGKRGMESYVTRVL------EGMKSCKVELCRDTYNTLI--CAYGRCGS 479
Query: 238 QVNA--LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
+ NA ++ E+ + AP + TYN +++ + G S++S+MKS KP+ ++++L
Sbjct: 480 RANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSYSL 539
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII-NYGKARLQGKAEYVFQKMTAM 354
L+ + K +E + K + P+ +++I N+ RL+G E FQ++ A
Sbjct: 540 LLQCHAKGGNAAGIEAIEKEVYQGNIFPSWVILRTLVIANFKCRRLEG-IERAFQEVKAR 598
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ P + ++++Y S+A E+F+ + +LG + T N++++ Y + P EA
Sbjct: 599 GHKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQLGLSPDLITYNSLMDMYAKSNEPWEA 658
Query: 415 DLLFEN---------SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
+ + + PD +Y + + K + + Q++L M +G+ P
Sbjct: 659 EKILNRLRSSQSQQQQQQQQLKPDVVSYNTVINGFCKEGLIKEAQRVLSEMIADGVAP 716
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 148/334 (44%), Gaps = 17/334 (5%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT--- 193
K R + Y+ L+ V GK G A+ + EM ++GC+PD YN L ++
Sbjct: 281 KARGHAPCVVTYNALLQVFGKAGNYTEALRVLREMEDAGCKPDAVTYNELAGSYARAGFY 340
Query: 194 RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP 253
++ AK + +G KG+ PN TYN ++ A A VD+ ALF + ++ P
Sbjct: 341 QEAAKCIDTMIG-----KGL---LPNTFTYNTIMTAYGNAGKVDEALALFDRMKKNGFIP 392
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
TYN V+ GK M +L M + C P+ +T+N L+ GKR + +V
Sbjct: 393 YTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGCTPNRVTWNTLLAVCGKRGMESYVTRVL 452
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
+ + K + T+N++I YG+ + A ++ +MTA + P TY ++ +
Sbjct: 453 EGMKSCKVELCRDTYNTLICAYGRCGSRANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQ 512
Query: 374 DNVSRAREIFDELSKLG---KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
+ + AR I ++ G DM S L L+ + G + + + + + P
Sbjct: 513 GDWTAARSIVSKMKSEGFKPNDMSYSLL---LQCHAKGGNAAGIEAIEKEVYQGNIFPSW 569
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ L A K E +++ + ++ G P+
Sbjct: 570 VILRTLVIANFKCRRLEGIERAFQEVKARGHKPD 603
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 137/320 (42%), Gaps = 4/320 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ ++ + ++G+ A+ LF E+R G P YN ++ + ++ +
Sbjct: 182 DVRAYTTVLHALSREGRYERALRLFDELRREGVAPTRVTYNVVLDVYGRM---GRSWPRV 238
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ M+ +P+ T + ++ A + VD+ A F++L AP + TYN ++
Sbjct: 239 VALLADMRAAG-VEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQ 297
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+GK G E VL M+ CKPD +T+N L SY + + + + +++ P
Sbjct: 298 VFGKAGNYTEALRVLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKGLLP 357
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T+N+++ YG A +A +F +M + P TY ++ M G + E+
Sbjct: 358 NTFTYNTIMTAYGNAGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEML 417
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
E+S+ G T N +L G+ + + E + V TY L AY +
Sbjct: 418 GEMSRSGCTPNRVTWNTLLAVCGKRGMESYVTRVLEGMKSCKVELCRDTYNTLICAYGRC 477
Query: 444 NMKELVQKLLKRMEQNGIVP 463
+ K+ M G P
Sbjct: 478 GSRANAFKMYDEMTAAGFAP 497
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 135/316 (42%), Gaps = 5/316 (1%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
L+ + G A+ L R G P+ + ++ A L + A+ L +M
Sbjct: 118 LLKALELSGHWEWALALLRWARAEGAADGPAPFEMVVRA-LGREGRHDAVCALL---DEM 173
Query: 211 KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
+ ++ Y +L A ++ ++ LF EL +AP TYN V+D YG+ G
Sbjct: 174 PLPPGARLDVRAYTTVLHALSREGRYERALRLFDELRREGVAPTRVTYNVVLDVYGRMGR 233
Query: 271 -IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFN 329
+ ++L+ M++ +PD T + +I + G+ D+ F+ L P + T+N
Sbjct: 234 SWPRVVALLADMRAAGVEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYN 293
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
+++ +GKA +A V ++M P +TY + Y A + D +
Sbjct: 294 ALLQVFGKAGNYTEALRVLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGK 353
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
G T N ++ AY G EA LF+ G P ++TY L+ K + +
Sbjct: 354 GLLPNTFTYNTIMTAYGNAGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAM 413
Query: 450 QKLLKRMEQNGIVPNK 465
++L M ++G PN+
Sbjct: 414 LEMLGEMSRSGCTPNR 429
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 122/275 (44%), Gaps = 39/275 (14%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ V+ ++G A + S+M++ G +P+ Y+ L+ H + A A +
Sbjct: 502 YNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVY 561
Query: 208 Q---------------------KMKGMERC---------KPNIVTYNILLRACAQARNVD 237
Q +++G+ER KP++V N +L A+
Sbjct: 562 QGNIFPSWVILRTLVIANFKCRRLEGIERAFQEVKARGHKPDLVILNSMLSIYAKNGLYS 621
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ---------CKP 288
+ +F+ + + L+PD+ TYN +MD Y K+ E E +L+R++S+Q KP
Sbjct: 622 KAMEMFESIEQLGLSPDLITYNSLMDMYAKSNEPWEAEKILNRLRSSQSQQQQQQQQLKP 681
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
D++++N +I+ + K + ++V ++ P + T+++++ Y + +A V
Sbjct: 682 DVVSYNTVINGFCKEGLIKEAQRVLSEMIADGVAPCVITYHTLVGGYASREMFAEAREVV 741
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
M K P +TY ++ Y AR+
Sbjct: 742 GYMIQRKLKPMELTYRRVVDSYCRAKRYEDARDFL 776
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K R + D I + ++++ K G AM +F + G PD YN+L+ + + +
Sbjct: 596 KARGHKPDLVILNSMLSIYAKNGLYSKAMEMFESIEQLGLSPDLITYNSLMDMYAKSNEP 655
Query: 197 AKALAKALGYFQKMKGMER-----CKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
+A K L + + ++ KP++V+YN ++ + + + + E+ +
Sbjct: 656 WEA-EKILNRLRSSQSQQQQQQQQLKPDVVSYNTVINGFCKEGLIKEAQRVLSEMIADGV 714
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY--GKR--QAFD 307
AP + TY+ ++ Y M E V+ M + KP +T+ ++DSY KR A D
Sbjct: 715 APCVITYHTLVGGYASREMFAEAREVVGYMIQRKLKPMELTYRRVVDSYCRAKRYEDARD 774
Query: 308 KMEQVFKSLMHSKEK 322
+ V ++ +S EK
Sbjct: 775 FLAVVAEADTNSDEK 789
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 169/382 (44%), Gaps = 44/382 (11%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
EL K ++ L+C ++ K++ ++ + ++++++ K +T++A L++EM R
Sbjct: 158 ELKKPNEALECF----YLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIR 213
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
+N +I L K K + +G+ + + KPN+VTYN ++
Sbjct: 214 SSLYTFNIMINV-LCKEGKLKKAKEFIGHMETLG----VKPNVVTYNTIIHGHCLRGKFQ 268
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ +F+ + + L PD YTYN + K G ++E ++ +M P+ +T+N LI
Sbjct: 269 RARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALI 328
Query: 298 DSYGKRQAFDKM-----EQVFKSLMHS---------------------------KEKPTL 325
D Y + DK E + K +M S +EK +
Sbjct: 329 DGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMM 388
Query: 326 P---TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P T N +I Y + +A + +M P+ +TY +I + G + + A +
Sbjct: 389 PDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADAL 448
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
F ++ + G + NA+++ +C NG A L + NM V PD TY L + Y +
Sbjct: 449 FSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCR 508
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
E ++LL M++ GI P+
Sbjct: 509 EGKVEEARQLLDEMKRRGIKPD 530
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 158/354 (44%), Gaps = 17/354 (4%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
+F+ M K + D Y+ I+ + K+G+ A L +M G P+ YNALI +
Sbjct: 273 IFQTM-KDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGY 331
Query: 191 LHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
+ D L KA Y +M KG+ ++VTYN+ + A + + + KE+ E
Sbjct: 332 CNKGD----LDKAYAYRDEMISKGI---MASLVTYNLFIHALFMEGRMGDADNMIKEMRE 384
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
+ PD T+N +++ Y + G K +L M +P ++T+ LI GKR +
Sbjct: 385 KGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKE 444
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+ +F + P + FN++I + +A + ++M MK P ITY +
Sbjct: 445 ADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTL-- 502
Query: 369 MYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
M GYC V AR++ DE+ + G + N ++ Y G +A + + G
Sbjct: 503 MQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGF 562
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFL---EALETFSS 477
P TY L + K E ++LLK M GI P+ +L EA+ET
Sbjct: 563 DPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDD 616
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 76/174 (43%)
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
+ F+LL+ +Y + + ++ + F + P + T N M+ + K A ++ +
Sbjct: 147 LIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAE 206
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M M S T+ +I + + +A+E + LG V T N ++ +C+ G
Sbjct: 207 MFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGK 266
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A ++F+ + G+ PD TY K E L+ +M + G+VPN
Sbjct: 267 FQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPN 320
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 110/281 (39%), Gaps = 41/281 (14%)
Query: 221 VTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSR 280
+ +++L+RA + + ++ F + E P+I T N ++ + K + + +
Sbjct: 147 LIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAE 206
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
M + + TFN++I+ K K ++ + KP + T+N++I +G L
Sbjct: 207 MFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTII--HGHC-L 263
Query: 341 QGK---AEYVFQKMTAMKYTPSFITYECIIT----------------------------- 368
+GK A +FQ M P TY I+
Sbjct: 264 RGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVT 323
Query: 369 ----MYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
+ GYC+ ++ +A DE+ G + T N + A M G +AD + +
Sbjct: 324 YNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMR 383
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
G+ PD+ T+ +L Y + + LL M GI P
Sbjct: 384 EKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQP 424
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 164/341 (48%), Gaps = 16/341 (4%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L + + M+K + A+ IY+ +I + K A LF++M G +PD YN+LI+
Sbjct: 241 LSLLKKMEKGKIE-ANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLIS 299
Query: 189 A---HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
+ D ++ L+ + + PN+VT+N L+ A A+ + + LF E
Sbjct: 300 CLCNYGRWSDASRLLSDMIE--------RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDE 351
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ + + P+I TYN +++ + + + E + + + M S C PD++T+N LI + K +
Sbjct: 352 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKR 411
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
++ ++F+ + T+N++I +A A+ +F+KM + P ITY
Sbjct: 412 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS- 470
Query: 366 IITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
I + G C + +A +F+ L K + + T N M+E C G + LF +
Sbjct: 471 -ILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 529
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
GV P+ Y + + + +KE L + M+++G +P+
Sbjct: 530 KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPD 570
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 147/325 (45%), Gaps = 7/325 (2%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
Y DT ++ LI + + A+ L M GC+PD Y ++ D +
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD----I 237
Query: 201 AKALGYFQKM-KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
AL +KM KG + + N+V YN ++ + +++D LF ++ + PD++TYN
Sbjct: 238 DLALSLLKKMEKG--KIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 295
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
++ G + +LS M + P+++TFN LID++ K + E++F ++
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 355
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
P + T+NS+I + +A+ +F M + P +TY +I + V
Sbjct: 356 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEG 415
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
E+F E+S+ G T N +++ G A +F+ + GV PD TY +L
Sbjct: 416 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 475
Query: 440 YTKANMKELVQKLLKRMEQNGIVPN 464
K E + + ++++ + PN
Sbjct: 476 LCKYGKLEKALVVFEYLQKSKMEPN 500
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 136/318 (42%), Gaps = 42/318 (13%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH-LHTRDKAKALAKALGY 206
++ LI K+G+ A LF EM P+ YN+LI +H R L +A
Sbjct: 329 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR-----LDEAQQI 383
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F M + C P++VTYN L++ +A+ V++ LF+E+ + L + TYN ++
Sbjct: 384 FTLMVSKD-CLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 442
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+ G + + +M S+ PDIIT+++L+D K +K VF+ L SK +P +
Sbjct: 443 QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIY 502
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T+N MI KA GK E ++F L
Sbjct: 503 TYNIMIEGMCKA---GKVE--------------------------------DGWDLFCSL 527
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
S G V M+ +C GL EAD LF G PDS Y L +A + K
Sbjct: 528 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDK 587
Query: 447 ELVQKLLKRMEQNGIVPN 464
+L+K M G V +
Sbjct: 588 AASAELIKEMRSCGFVGD 605
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 151/355 (42%), Gaps = 46/355 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+SKL++ + K + + + L +M+N G + Y+ L+ ALA LG
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALA-VLGKM 142
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K+ G E P+IVT + LL + + + AL ++ E PD T+N ++
Sbjct: 143 MKL-GYE---PDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFL 198
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD-------KMEQ--------- 311
+ E +++ RM + C+PD+ T+ +++ KR D KME+
Sbjct: 199 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVI 258
Query: 312 -------------------VFKSLMHSKEKPTLPTFNSMI---INYGKARLQGKAEYVFQ 349
+F + KP + T+NS+I NYG+ A +
Sbjct: 259 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGR---WSDASRLLS 315
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
M K P+ +T+ +I + + A ++FDE+ + D + T N+++ +CM+
Sbjct: 316 DMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 375
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA +F + PD TY L K + KA E +L + M Q G+V N
Sbjct: 376 RLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 430
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 121/255 (47%), Gaps = 10/255 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + K K ++ ++F M QR + Y+ LI + A +F+ M +
Sbjct: 332 LIDAFAKEGKLIEAEKLFDEMI-QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 390
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQ 232
C PD YN LI KAK + + + F++M +G+ N VTYN L++ Q
Sbjct: 391 DCLPDVVTYNTLIKGFC----KAKRVEEGMELFREMSQRGL---VGNTVTYNTLIQGLFQ 443
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
A + D +FK++ + PDI TY+ ++D K G +++ V ++ ++ +P+I T
Sbjct: 444 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYT 503
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N++I+ K + +F SL KP + + +MI + + L+ +A+ +F++M
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 563
Query: 353 AMKYTPSFITYECII 367
P Y +I
Sbjct: 564 EDGTLPDSGCYNTLI 578
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 117/279 (41%), Gaps = 5/279 (1%)
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L A+ F +M R P+I+ ++ LL A A+ D V +L +++ + + YTY+
Sbjct: 62 LDDAVALFGEMVK-SRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
+++ + + + +VL +M +PDI+T + L++ Y + + + ++
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVS 377
KP TFN++I +A + +M A P TY ++ G C ++
Sbjct: 181 GYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN--GLCKRGDID 238
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
A + ++ K + V N +++ C +A LF G+ PD TY L
Sbjct: 239 LALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLI 298
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+LL M + I PN F ++ F+
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFA 337
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 40/200 (20%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + K+ + + +E+FR M QR + +T Y+ LI + + G +A +F +M +
Sbjct: 402 LIKGFCKAKRVEEGMELFREMS-QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD 460
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQK-------------MKGM-------- 213
G PD Y+ L+ KAL Y QK ++GM
Sbjct: 461 GVPPDIITYSILLDGLCKYGKLEKALV-VFEYLQKSKMEPNIYTYNIMIEGMCKAGKVED 519
Query: 214 ----------ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ KPN++ Y ++ + ++ +ALF+E+ E PD YN ++
Sbjct: 520 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIR 579
Query: 264 AYGKNG-------MIKEMES 276
A ++G +IKEM S
Sbjct: 580 ARLRDGDKAASAELIKEMRS 599
>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
Length = 662
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 149/312 (47%), Gaps = 20/312 (6%)
Query: 169 SEMRNSGCRPDPSVYNAL-------------ITAHLHTRDKAKALAKALGYFQKM--KGM 213
+EM G RP+ + A + T +K K + +A Q M KG+
Sbjct: 211 NEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGI 270
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
E + +TYNI++R C + +++ L ++ PD++T+N ++ AY G ++E
Sbjct: 271 EL---DSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEE 327
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
+L +MK+ +PDI+++ +ID + K + K ++ LM KP + +N++I
Sbjct: 328 TFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIG 387
Query: 334 NYGK-ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKD 392
YG+ + G + V + M + P+ +TY ++ + V A+ IF + + D
Sbjct: 388 GYGRNGDISGAIDAV-ETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVD 446
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
+ V M++ YC G EA FE + G++P+ TY L AY+K+ E KL
Sbjct: 447 LGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKL 506
Query: 453 LKRMEQNGIVPN 464
M +G++P+
Sbjct: 507 FDEMVGSGVIPD 518
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 85/184 (46%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
N +Y +++A +A VD + EL + L P + TYN +MDA K+G ++E +
Sbjct: 10 NEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLK 69
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
RM+ P ++TF +LI+ + + F ++ V + + P +N +I + +
Sbjct: 70 GRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRK 129
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
+A +F +M K P+ +TY I + RA I +++ +G +
Sbjct: 130 GHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLF 189
Query: 399 NAML 402
N ++
Sbjct: 190 NTVV 193
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 118/287 (41%), Gaps = 28/287 (9%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+R + D ++ L+ G+ L +M+ G +PD Y +I H KA
Sbjct: 302 RRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHC----KA 357
Query: 198 KALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
K + KA Y ++ M+R KPN+ YN L+ + ++ + + + + P
Sbjct: 358 KDIRKAKEYLTEL--MDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNV 415
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TY +M G+++E +++ S+ + N +I + ++I Y K + F+ +
Sbjct: 416 TYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEM 475
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII--------- 367
P T+ +++ Y K+ +A +F +M P ITY +I
Sbjct: 476 RSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEKGGK 535
Query: 368 -TMYG---YCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
T YG +CD + A I D G +K LE+ CM+
Sbjct: 536 TTQYGQELHCDLSKLLSADWIMDTQVHFGHQLK------HLESQCMD 576
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 107/266 (40%), Gaps = 18/266 (6%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+P +VTYN+L+ A ++ V++ L + + + P + T+ +++ + E+
Sbjct: 43 QPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGI 102
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
VL M+ P+ + +N LI + ++ + ++F ++ K KPT T+N +
Sbjct: 103 VLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALC 162
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIIT-MYGYCDNVSRAREIFDELSKLGKDMKV 395
K +AE + + M ++ T + ++ + + I +E+ G
Sbjct: 163 KEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPND 222
Query: 396 STLNAMLEAYCMNG-----------------LPTEADLLFENSHNMGVTPDSSTYKLLYK 438
+ A + C G EA + + N G+ DS TY ++ +
Sbjct: 223 PLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIR 282
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPN 464
K + E KL M + G P+
Sbjct: 283 GCCKDSKMEEAIKLHGDMTRRGFKPD 308
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 100/217 (46%), Gaps = 5/217 (2%)
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
+A + Y+Y ++ A K G + +L+ + +P ++T+N+L+D+ K ++
Sbjct: 7 VALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAF 66
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
++ + P++ TF +I + G+ V Q+M + +P+ + Y +I +
Sbjct: 67 RLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWH 126
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVS--TLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
+ S+A +FDE+ + K MK + T N + +A C G A+ + E+ ++G+T
Sbjct: 127 CRKGHCSQALRLFDEM--VLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTV 184
Query: 429 DSSTYKLLYKAYTKANMK-ELVQKLLKRMEQNGIVPN 464
+ + + + E V + M G+ PN
Sbjct: 185 HCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPN 221
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%)
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
V E+ EL + G V T N +++A C +G EA L G+TP T+ +
Sbjct: 27 VDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGI 86
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
L + V +L+ MEQ G+ PN+ + E +
Sbjct: 87 LINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELI 123
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 142/319 (44%), Gaps = 6/319 (1%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
IY+ LIA+ K A+ LF EMR+ CRPD Y LI KA +A +
Sbjct: 263 IYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRG----LGKAGRFDEAYNF 318
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA-Y 265
F +M+ E C+P+ V N ++ +A +D LF+E+ P + TYN ++ A +
Sbjct: 319 FHEMR-REGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALF 377
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
I E+ S RMK + P T+++LID + K +K + + + P
Sbjct: 378 ESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCP 437
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
+ S+I GKA+ A +FQ++ + S Y +I G + A +FDE
Sbjct: 438 AAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDE 497
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
++KLG V NA++ G+ EA G PD ++Y ++ K
Sbjct: 498 MNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGG 557
Query: 446 KELVQKLLKRMEQNGIVPN 464
++L M+Q+ I P+
Sbjct: 558 PHRAMEMLSNMKQSAIKPD 576
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 158/333 (47%), Gaps = 7/333 (2%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L +F M+ Q + D Y++LI +GK G+ A F EMR GCRPD V N +I
Sbjct: 281 LGLFEEMRHQ-YCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMI- 338
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN-VDQVNALFKELH 247
+ KA L A+ F++M G +C P++VTYN +++A ++++ + ++++ F+ +
Sbjct: 339 ---NFLGKAGRLDDAVKLFEEM-GTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMK 394
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
S ++P +TY+ ++D + K ++ +L M P + LID+ GK + +D
Sbjct: 395 GSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYD 454
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
++F+ L + + + MI + GKA A +F +M + TP+ Y ++
Sbjct: 455 IAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALM 514
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
+ + A + + G +++ N +L G P A + N +
Sbjct: 515 SGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIK 574
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
PD+ +Y + A + A + E KL+K M G
Sbjct: 575 PDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLG 607
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 180/408 (44%), Gaps = 26/408 (6%)
Query: 66 PRSKRGRKSEELESKELVRVL--MRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSD 123
P +R +S + + +R+L + D E + L +++ +H L E+ K+D
Sbjct: 44 PIERRYTRSVRVMDERFIRILKIFKWGPDAEKALEVL-----MLKVDH--WLVREVMKTD 96
Query: 124 KWLQC-LEVFRWMQKQRWYIADTGIYSKLI---AVMGKKGQTRLAMW-LFSEM-RNSGCR 177
+ ++ FRW K+R Y DT Y LI V+ + G+ MW + EM RN C
Sbjct: 97 VGVNVKMQFFRWAAKKRNYEHDTSTYMALIRCLEVVEQYGE----MWKMIQEMVRNPVCV 152
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
P + +I AK ++KA+ F ++K + +C+P YN ++ +
Sbjct: 153 VTPMELSDII----RMLGNAKMISKAVAIFYQIK-VRKCQPTAQAYNSMIIMLMHEGQYE 207
Query: 238 QVNALFKEL-HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
+V+ L+ E+ +E PD TY+ ++ A+ K G +L+ MK N +P + +L
Sbjct: 208 KVHELYNEMSNEGHCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTML 267
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
I + K +F+ + H +P + T+ +I GKA +A F +M
Sbjct: 268 IALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGC 327
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA-YCMNGLPTEAD 415
P + +I G + A ++F+E+ L V T N +++A + +E
Sbjct: 328 RPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEIS 387
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
FE G++P TY +L + K N E LL+ M++ G P
Sbjct: 388 SWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPP 435
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 135/304 (44%), Gaps = 42/304 (13%)
Query: 100 LNKYVKVVRSEHCFLLFEELGKSDKWLQCL---------------------EVFRWMQKQ 138
+N K R + LFEE+G LQC+ E+ W ++
Sbjct: 338 INFLGKAGRLDDAVKLFEEMGT----LQCIPSVVTYNTIIKALFESKSRISEISSWFERM 393
Query: 139 RWYIADTGI------YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH 192
+ +GI YS LI K +T AM L EM G P P+ Y +LI A
Sbjct: 394 K----GSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDA--- 446
Query: 193 TRDKAKALAKALGYFQKMKGMERCKPNIV-TYNILLRACAQARNVDQVNALFKELHESIL 251
KAK A FQ++K E C + Y ++++ +A +D LF E+++
Sbjct: 447 -LGKAKRYDIAHELFQELK--ENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGC 503
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
P++Y YN +M + GM+ E + + RM+ + C PDI ++N++++ K + +
Sbjct: 504 TPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAME 563
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+ ++ S KP ++N+++ A L +A + ++M + + ITY I+ G
Sbjct: 564 MLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAIG 623
Query: 372 YCDN 375
D+
Sbjct: 624 KVDH 627
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 135/330 (40%), Gaps = 5/330 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L LGK+ ++ + F M+++ DT + + +I +GK G+ A+ LF EM
Sbjct: 302 LIRGLGKAGRFDEAYNFFHEMRREGCR-PDTVVINNMINFLGKAGRLDDAVKLFEEMGTL 360
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
C P YN +I A ++ + ++ +F++MKG P+ TY+IL+ +
Sbjct: 361 QCIPSVVTYNTIIKALFESKSRISEISS---WFERMKG-SGISPSPFTYSILIDGFCKTN 416
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
++ L +E+ E P Y ++DA GK + +K N +
Sbjct: 417 RTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYA 476
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++I GK D +F + P + +N+++ +A + +A ++M
Sbjct: 477 VMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEH 536
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P +Y I+ RA E+ + + + N +L A GL EA
Sbjct: 537 GCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEA 596
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
L + + +G D TY + +A K +
Sbjct: 597 AKLMKEMNVLGFEYDLITYSSILEAIGKVD 626
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 72/188 (38%), Gaps = 35/188 (18%)
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN-YGKARLQGKAEYV 347
D T+ LI + + +M ++ + ++ + P S II G A++ KA +
Sbjct: 118 DTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAI 177
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F ++ K P+ Y +I M + + E+++E+S E +C
Sbjct: 178 FYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSN--------------EGHCF 223
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
PD+ TY L A+ K ++ +LL M+ NG+ P +
Sbjct: 224 --------------------PDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKI 263
Query: 468 FLEALETF 475
+ + F
Sbjct: 264 YTMLIALF 271
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 160/329 (48%), Gaps = 7/329 (2%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
R Y D Y+ +I + K G+T A LF +M +GC+PD Y+ +I + K +
Sbjct: 4 RGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLC----KDR 59
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
+ +AL F MK + PNI TYN L++ + +A+ E+ + P+I T+
Sbjct: 60 RVNEALDIFSYMKA-KGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTF 118
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
+ +++ + K G + E VL M +P+++T++ L++ Y + + ++F ++
Sbjct: 119 SLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMIT 178
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
KP + ++N +I Y KA+ G+A+ +F +M TP ++Y +I +
Sbjct: 179 KGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLRE 238
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A ++F + G + T + +L+ +C G +A LF + + P+ Y +L
Sbjct: 239 AHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILID 298
Query: 439 AYTKA-NMKELVQKLLKRMEQNGIVPNKR 466
A K+ N+KE +KL + G+ PN +
Sbjct: 299 AMCKSRNLKE-ARKLFSELFVQGLQPNMK 326
>gi|242054943|ref|XP_002456617.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
gi|241928592|gb|EES01737.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
Length = 410
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 145/321 (45%), Gaps = 5/321 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D + L+ + G A +F M G P+ Y ALI H + + + A
Sbjct: 37 DVAACTALVHGCCQSGDVAEARRVFDVMPRLGVTPNEVTYTALI--HGYFVRGQREMGFA 94
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L + G+E PN+ TYN L+ + LF E+ + ++ +YN ++
Sbjct: 95 LVGEMRRGGVE---PNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIA 151
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
++G +K+ + M+ P ++TFNLLID YGK F + + +P
Sbjct: 152 GLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQP 211
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
++ T+N +I + +AR A F M + P+ +TY +I + + + RA E+
Sbjct: 212 SVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEML 271
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
E+ K G ++ V + +L A CM G A LF++ + GV P++ Y ++ Y +
Sbjct: 272 SEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGRE 331
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+L+ M ++G++PN
Sbjct: 332 GSSYKALRLIMEMRKSGLIPN 352
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 134/327 (40%), Gaps = 40/327 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI +GQ + L EMR G P+ YN L+ T + A + L
Sbjct: 76 YTALIHGYFVRGQREMGFALVGEMRRGGVEPNLYTYNCLVGEWCRTGEFKSA--RLLFDE 133
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+KG+ R N+V+YNIL+ + + LF+ + + P + T+N ++D YGK
Sbjct: 134 MPLKGVVR---NVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGK 190
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + ++MK+ +P ++T+N LI + + + + F + + PT T
Sbjct: 191 AGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVT 250
Query: 328 FNSMIINYGKAR--------------------------------LQGK---AEYVFQKMT 352
+ +I + K ++GK A +FQ M
Sbjct: 251 YTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMD 310
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ P+ + Y+ +I YG + +A + E+ K G V++ + C G
Sbjct: 311 SKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVASYCLTIRLLCNEGKCQ 370
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKA 439
EA+ L + + G+ S ++L+ A
Sbjct: 371 EAEALIGDMEDAGLQTSESICRVLFDA 397
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 11/211 (5%)
Query: 271 IKEMESVLSR-MKSNQCKPDIITFNLLIDSYGKRQAFDKME--QVFKSLMHSKEKPTLPT 327
++ +VL+R KS D+ L+ +G Q+ D E +VF + P T
Sbjct: 18 VRSALAVLARGTKSGDAALDVAACTALV--HGCCQSGDVAEARRVFDVMPRLGVTPNEVT 75
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECIITMYGYCDNVSRAREIFD 384
+ ++I Y ++G+ E F + M+ P+ TY C++ + AR +FD
Sbjct: 76 YTALIHGY---FVRGQREMGFALVGEMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFD 132
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E+ G V + N ++ C +G +A LFE G+ P T+ LL Y KA
Sbjct: 133 EMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAG 192
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+M+ G+ P+ + E + F
Sbjct: 193 KMSNALHFFNQMKAAGLQPSVVTYNELIGGF 223
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/269 (20%), Positives = 97/269 (36%), Gaps = 35/269 (13%)
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
R CA A + L + A D+ ++ ++G + E V M
Sbjct: 11 RLCAAAEVRSALAVLARGTKSGDAALDVAACTALVHGCCQSGDVAEARRVFDVMPRLGVT 70
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK------ARL- 340
P+ +T+ LI Y R + + + +P L T+N ++ + + ARL
Sbjct: 71 PNEVTYTALIHGYFVRGQREMGFALVGEMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLL 130
Query: 341 -------------------------QGK---AEYVFQKMTAMKYTPSFITYECIITMYGY 372
GK A +F+ M PS +T+ +I YG
Sbjct: 131 FDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGK 190
Query: 373 CDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
+S A F+++ G V T N ++ +C A F + + P T
Sbjct: 191 AGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVT 250
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGI 461
Y +L A+ K N + ++L ME+ G+
Sbjct: 251 YTILIGAFAKENEMDRAFEMLSEMEKAGL 279
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 168/369 (45%), Gaps = 16/369 (4%)
Query: 106 VVRSEHCF-LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLA 164
+V + HC +L K + + VF MQ Q + YS LI+ + G+ A
Sbjct: 403 IVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVR-PNVVTYSTLISAFCRMGRLADA 461
Query: 165 MWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVT 222
M FS+M + G P+ +VY++LI D L KA + +M KG+ R PNIV
Sbjct: 462 MEKFSQMISIGIEPNTAVYHSLIHGFCMHGD----LVKAKEFISEMMSKGLHR--PNIVF 515
Query: 223 YNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
++ ++ + C + R +D + +H P I T+N ++D Y G +++ VL M
Sbjct: 516 FSSIIHSLCIEGRVMDAQDVFNLVIHIGD-RPTIVTFNSLIDGYCLVGKMEKAFGVLDAM 574
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
S +PD++T N L+ Y K D +F+ ++H K KPT T+N ++ +A
Sbjct: 575 VSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRT 634
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLN 399
A+ +F +M TY+ I + G C N A +F +L + ++ LN
Sbjct: 635 SAAKKMFHEMIDSGTAVDIDTYK--ILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILN 692
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
M+ A EA+ LF G+ P+ STY ++ + K E + ME++
Sbjct: 693 TMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKS 752
Query: 460 GIVPNKRFF 468
G P+ R
Sbjct: 753 GCAPSSRLL 761
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 5/310 (1%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM-KGMERCKPNIVTYNI 225
L M C PD YN +I + L +++ +AL Q+M K RC P++V++N
Sbjct: 182 LLHRMSELSCVPDAISYNTVIKS-LCGDSRSQ---EALDMVQRMAKEGGRCSPDVVSFNT 237
Query: 226 LLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ 285
++ + V + LF E+ + + PD+ TYN ++DA K + + E VL +M
Sbjct: 238 VIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKG 297
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
+PD +T+N +I Y + + ++F+ + P TF+S + + K AE
Sbjct: 298 VEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAE 357
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+FQ MT + P ++Y ++ Y + +F ++ G +N ++ A+
Sbjct: 358 EIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAH 417
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
G+ EA L+F GV P+ TY L A+ + + +M GI PN
Sbjct: 418 AKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNT 477
Query: 466 RFFLEALETF 475
+ + F
Sbjct: 478 AVYHSLIHGF 487
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 139/286 (48%), Gaps = 10/286 (3%)
Query: 127 QCLEVFRWMQKQRWYIA-DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
+ L++ + M K+ + D ++ +I K+G+ A LF+EM G PD YN+
Sbjct: 213 EALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNS 272
Query: 186 LITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
++ A KA+A+ KA ++M KG+E P+ VTYN ++ + + + + +F
Sbjct: 273 IVDALC----KARAMDKAEFVLRQMVDKGVE---PDGVTYNAIIHGYSCSGHWKESAKMF 325
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR 303
+++ L PD T++ M + K+G K+ E + M + PDI+++++L+ Y
Sbjct: 326 RKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATE 385
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
F M +F S+ N +I + K + +A VF +M P+ +TY
Sbjct: 386 GRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTY 445
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
+I+ + ++ A E F ++ +G + + ++++ +CM+G
Sbjct: 446 STLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHG 491
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 156/361 (43%), Gaps = 39/361 (10%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL---HTR 194
Q+ + D G Y+ ++ + K A ++ +M + G PD YNA+I + H +
Sbjct: 260 QKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWK 319
Query: 195 DKAKALAK----------------------------ALGYFQKM--KGMERCKPNIVTYN 224
+ AK K A FQ M KG P+IV+Y+
Sbjct: 320 ESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGH---MPDIVSYS 376
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
ILL A +N LF + + + + + N ++ A+ K GM+ E V + M+
Sbjct: 377 ILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQ 436
Query: 285 QCKPDIITFNLLIDSYGKRQAF-DKMEQVFKSLMHSKEKPTLPTFNSMIINYG-KARLQG 342
+P+++T++ LI ++ + D ME+ F ++ +P ++S+I + L
Sbjct: 437 GVRPNVVTYSTLISAFCRMGRLADAMEK-FSQMISIGIEPNTAVYHSLIHGFCMHGDLVK 495
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
E++ + M+ + P+ + + II V A+++F+ + +G + T N+++
Sbjct: 496 AKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLI 555
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+ YC+ G +A + + ++G+ PD T L Y K+ + L + M +
Sbjct: 556 DGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVK 615
Query: 463 P 463
P
Sbjct: 616 P 616
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 112/251 (44%), Gaps = 3/251 (1%)
Query: 217 KPNIVTYNILLRACAQARNVDQ-VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
K + L+ A+ D+ V+ L + E PD +YN V+ + + +E
Sbjct: 156 KTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEAL 215
Query: 276 SVLSRM--KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
++ RM + +C PD+++FN +I + K+ K +F ++ P + T+NS++
Sbjct: 216 DMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVD 275
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
KAR KAE+V ++M P +TY II Y + + ++F +++ G
Sbjct: 276 ALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIP 335
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
T ++ + + C +G +A+ +F+ G PD +Y +L Y + L
Sbjct: 336 DTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLF 395
Query: 454 KRMEQNGIVPN 464
M GIV N
Sbjct: 396 HSMADKGIVSN 406
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 145/364 (39%), Gaps = 25/364 (6%)
Query: 111 HCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSE 170
H F + +L K+ +++ M + + + +S +I + +G+ A +F+
Sbjct: 485 HGFCMHGDLVKAKEFIS------EMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNL 538
Query: 171 MRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK--GMERCKPNIVTYNILLR 228
+ + G RP +N+LI + + KA G M G+E P++VT N L+
Sbjct: 539 VIHIGDRPTIVTFNSLIDGYC----LVGKMEKAFGVLDAMVSVGIE---PDVVTNNTLVS 591
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
++ +D LF+E+ + P TYN V+D + G + + M +
Sbjct: 592 GYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAV 651
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
DI T+ +L+ + D+ +F L K + N+MI K R + +A +F
Sbjct: 652 DIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLF 711
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
++ P+ TY +I +V A +F + K G LN ++
Sbjct: 712 AAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQK 771
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK-RF 467
G +A ++ ++ST LL ++ K EQ +P K +F
Sbjct: 772 GDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKG---------KHREQIKFLPAKYQF 822
Query: 468 FLEA 471
F A
Sbjct: 823 FYGA 826
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 64/145 (44%), Gaps = 8/145 (5%)
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM----- 393
R + + +M+ + P I+Y +I C + SR++E D + ++ K+
Sbjct: 174 RTDEAVDVLLHRMSELSCVPDAISYNTVIK--SLCGD-SRSQEALDMVQRMAKEGGRCSP 230
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
V + N ++ + G ++A LF GV PD TY + A KA + + +L
Sbjct: 231 DVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVL 290
Query: 454 KRMEQNGIVPNKRFFLEALETFSSS 478
++M G+ P+ + + +S S
Sbjct: 291 RQMVDKGVEPDGVTYNAIIHGYSCS 315
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 149/323 (46%), Gaps = 9/323 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++ LI + +G+ + A+ LF+EM SG P+ YN +I + A+
Sbjct: 165 DAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVR-- 222
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F+KM+ R KPN+VTYN ++ + + R V++ E+ + + PD+ TYN ++
Sbjct: 223 --VFRKME-QNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILH 279
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ G + E + M PD +TFN+L+D K + V +++ +P
Sbjct: 280 GFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEP 339
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRARE 381
T+N+++ Y +A V M P+ +Y +I GYC + ++ A+
Sbjct: 340 NAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILIN--GYCKSKRMNEAKR 397
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ E+S+ T + +++ C G P EA LF+ + G+ PD Y +L +
Sbjct: 398 LLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFC 457
Query: 442 KANMKELVQKLLKRMEQNGIVPN 464
K + KLLK M + I PN
Sbjct: 458 KHGHLDEALKLLKEMHERRIKPN 480
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 155/322 (48%), Gaps = 15/322 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I + K G T +A+ +F +M + +P+ YN +I + K + + +A+ +
Sbjct: 204 YNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLC----KDRLVNEAVEFL 259
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M +G+ P++VTYN +L +++ LFKE+ + PD T+N ++D
Sbjct: 260 SEMVDRGI---PPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K GM+ E V M +P+ T+N L+D Y D+ +V ++ P L
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNL 376
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE---I 382
++N +I Y K++ +A+ + +M+ TP +TY + M G C V R RE +
Sbjct: 377 SSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTL--MQGLC-QVGRPREALNL 433
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
F E+ G + + +L+ +C +G EA L + H + P+ Y +L +
Sbjct: 434 FKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFI 493
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
A E+ ++L ++ +GI P+
Sbjct: 494 AGKLEVAKELFSKLSADGIRPD 515
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 148/329 (44%), Gaps = 13/329 (3%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
LI + + A+ + +M G +PD +N LI L K K +A+G F +M
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLING-LCNEGKIK---EAVGLFNEM 192
Query: 211 --KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
G E PN+++YN ++ + N +F+++ ++ P++ TYN ++D+ K+
Sbjct: 193 VWSGHE---PNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKD 249
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
++ E LS M PD++T+N ++ + ++ ++FK ++ P TF
Sbjct: 250 RLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTF 309
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDEL 386
N ++ K + +A V + MT P+ TY + M GYC + + A ++ +
Sbjct: 310 NILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNAL--MDGYCLHNQMDEAIKVLGIM 367
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
G +S+ N ++ YC + EA L +TPD+ TY L + +
Sbjct: 368 IGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRP 427
Query: 447 ELVQKLLKRMEQNGIVPNKRFFLEALETF 475
L K M +G++P+ + L+ F
Sbjct: 428 REALNLFKEMCSSGLLPDLMAYSILLDGF 456
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 157/353 (44%), Gaps = 20/353 (5%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L K+ + + VFR M++ R + Y+ +I + K A+ SEM + G P
Sbjct: 211 LCKNGNTIMAVRVFRKMEQNRGK-PNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPP 269
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
D YN + LH L +A F++M G P+ VT+NIL+ + V +
Sbjct: 270 DVVTYNTI----LHGFCSLGQLNEATRLFKEMVG-RNVMPDTVTFNILVDGLCKEGMVSE 324
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+ + + E P+ YTYN +MD Y + + E VL M C P++ ++N+LI+
Sbjct: 325 ARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILIN 384
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
Y K + ++ +++ + P T+++++ + +A +F++M + P
Sbjct: 385 GYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLP 444
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL--NAMLEAYCMNGLPTEADL 416
+ Y I + G+C + DE KL K+M + N +L + G+ L
Sbjct: 445 DLMAYS--ILLDGFCKHGH-----LDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKL 497
Query: 417 -----LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
LF G+ PD TY ++ K K + + + ++ME +G +P+
Sbjct: 498 EVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPD 550
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 121/250 (48%), Gaps = 8/250 (3%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
N+ + N+L+ + +VD ++ ++ + + PD T+N +++ G IKE +
Sbjct: 130 NVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLF 189
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
+ M + +P++I++N +I+ K +VF+ + ++ KP + T+N++I + K
Sbjct: 190 NEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKD 249
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDM--K 394
RL +A +M P +TY I ++G+C ++ A +F E+ +G+++
Sbjct: 250 RLVNEAVEFLSEMVDRGIPPDVVTYNTI--LHGFCSLGQLNEATRLFKEM--VGRNVMPD 305
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
T N +++ C G+ +EA + E G P++ TY L Y N + K+L
Sbjct: 306 TVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLG 365
Query: 455 RMEQNGIVPN 464
M G PN
Sbjct: 366 IMIGKGCAPN 375
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 106/227 (46%), Gaps = 5/227 (2%)
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
Q A+ + M GC P+ S YN LI + K+K + +A +M + P+
Sbjct: 356 QMDEAIKVLGIMIGKGCAPNLSSYNILINGYC----KSKRMNEAKRLLSEMSE-KNLTPD 410
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
VTY+ L++ Q + LFKE+ S L PD+ Y+ ++D + K+G + E +L
Sbjct: 411 TVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLK 470
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
M + KP+II + +LI + +++F L +P + T+N MI K
Sbjct: 471 EMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEG 530
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
L +A F+KM + P +Y II + + S A ++ DE+
Sbjct: 531 LSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEM 577
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 117/266 (43%), Gaps = 1/266 (0%)
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
++ AL F +M M +P++V + L + A+ + +L ++ + ++Y+
Sbjct: 76 SIDDALTSFYRMVRMNP-RPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSL 134
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N +++ + + SV+ +M +PD ITFN LI+ + +F ++
Sbjct: 135 NVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVW 194
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
S +P + ++N++I K A VF+KM + P+ +TY II V+
Sbjct: 195 SGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNE 254
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A E E+ G V T N +L +C G EA LF+ V PD+ T+ +L
Sbjct: 255 AVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVD 314
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPN 464
K M + + + M + G PN
Sbjct: 315 GLCKEGMVSEARCVSETMTEKGAEPN 340
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 74/200 (37%), Gaps = 4/200 (2%)
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
RM +P ++ F + S K++ + + + + + N +I +
Sbjct: 86 RMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLS 145
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVST 397
A V KM + P IT+ +I G C+ + A +F+E+ G + V +
Sbjct: 146 HVDFAVSVMGKMFKLGIQPDAITFNTLIN--GLCNEGKIKEAVGLFNEMVWSGHEPNVIS 203
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
N ++ C NG A +F P+ TY + + K + + L M
Sbjct: 204 YNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMV 263
Query: 458 QNGIVPNKRFFLEALETFSS 477
GI P+ + L F S
Sbjct: 264 DRGIPPDVVTYNTILHGFCS 283
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 162/357 (45%), Gaps = 41/357 (11%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT YS LI+ GK + A LF EM+ +G P +Y ++ + K + A
Sbjct: 229 DTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYF----KLNKVEAA 284
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L ++MKG + C P + TY L++ + VD +LF + + PD+ N +++
Sbjct: 285 LRLVEEMKG-KGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLIN 343
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA--------FDKME----- 310
G+ G +++ + +M S QC P+++T+N +I + + +A F+KM+
Sbjct: 344 ILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIA 403
Query: 311 -----------------QVFKSL-----MHSKEKPTLP-TFNSMIINYGKARLQGKAEYV 347
+V K+L M K P P + S+I + G+A+ A +
Sbjct: 404 PSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANEL 463
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
FQ++ S Y +I +G C +S A ++F E+ KLG V T NA++
Sbjct: 464 FQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIR 523
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G+ EA L N G TPD ++ ++ K + ++ +M+++ I+P+
Sbjct: 524 AGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPD 580
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 147/314 (46%), Gaps = 6/314 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y++LI +GK G+ A LF M GC+PD + N LI + +A L AL F
Sbjct: 303 YTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLI----NILGRAGRLEDALKLF 358
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL-FKELHESILAPDIYTYNGVMDAYG 266
KM ++ C PN+VTYN +++A +++ AL F+++ + +AP +TY ++D +
Sbjct: 359 GKMDSLQ-CAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFC 417
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K +++ +L M P + LIDS G+ + ++ ++F+ L + + +
Sbjct: 418 KTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSAR 477
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
+ MI ++G A +F +M + +P TY +++ + A + +
Sbjct: 478 VYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNM 537
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
+ G + + N +L G P A +F + PD+ +Y + ++A M
Sbjct: 538 RENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMF 597
Query: 447 ELVQKLLKRMEQNG 460
E+ KL++ M+ G
Sbjct: 598 EMAAKLMREMKLKG 611
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 150/341 (43%), Gaps = 15/341 (4%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMW-LFSEMRNSGCRPDPSVYNALI 187
++ F+W K++ + D+ Y LI + + G MW +M S C P+ ++ +
Sbjct: 108 IQFFKWAGKRQHFQHDSTTYMALIRCLEESGLVD-EMWRTIQDMIRSPCSVGPAEWSEI- 165
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL- 246
L KAK + KAL F ++KG +C P YN L+ + ++++ L+ E+
Sbjct: 166 ---LKILGKAKMVNKALSVFYQIKG-RKCNPTATVYNTLILMLMHEGHHEKIHELYNEIC 221
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
E +PD TY+ ++ A+GK + MK N P + ++ Y K
Sbjct: 222 SEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFK---L 278
Query: 307 DKMEQVFKSLMHSKEK---PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
+K+E + + K K PT+ T+ +I GK A +F M P +
Sbjct: 279 NKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLI 338
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP-TEADLLFENSH 422
+I + G + A ++F ++ L V T N +++A + P +EA L FE
Sbjct: 339 NNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMK 398
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
G+ P S TY +L + K N E LL+ M++ G P
Sbjct: 399 ANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPP 439
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 7/228 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI K + A+ L EM G P P+ Y +LI + +AK A F
Sbjct: 409 YAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLI----DSLGRAKRYEAANELF 464
Query: 208 QKMKGMERC-KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
Q++K E C + + Y ++++ + LF E+ + +PD+YTYN +M
Sbjct: 465 QELK--ENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMI 522
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+ GMI E S++ M+ N C PDI + N++++ K + ++F + S+ P
Sbjct: 523 RAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAV 582
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
++N+++ +A + A + ++M + ITY I+ G D
Sbjct: 583 SYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAVGKVD 630
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 131/302 (43%), Gaps = 51/302 (16%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D + + LI ++G+ G+ A+ LF +M + C P+ YN +I A + KA A A
Sbjct: 334 DVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFES--KAPASEAA 391
Query: 204 LGYFQKMK--GMER------------CKPNIV--------------------TYNILLRA 229
L +F+KMK G+ CK N V Y L+ +
Sbjct: 392 L-WFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDS 450
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
+A+ + N LF+EL E+ Y ++ +G G + + + MK C PD
Sbjct: 451 LGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPD 510
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
+ T+N L+ + D+ + +++ + P + + N ++ K +A +F
Sbjct: 511 VYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFT 570
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS-------TLNAML 402
KM + P ++Y I++ +SRA +F+ +KL ++MK+ T +++L
Sbjct: 571 KMKESEIMPDAVSYNTILSC------LSRAG-MFEMAAKLMREMKLKGFEYDSITYSSIL 623
Query: 403 EA 404
EA
Sbjct: 624 EA 625
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 99/244 (40%), Gaps = 1/244 (0%)
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
TY L+R ++ VD++ +++ S + ++ ++ GK M+ + SV ++
Sbjct: 126 TYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVFYQI 185
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-KPTLPTFNSMIINYGKARL 340
K +C P +N LI +K+ +++ + P T++++I +GK
Sbjct: 186 KGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLER 245
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
A +F +M P+ Y I+ MY + V A + +E+ G V T
Sbjct: 246 YDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTE 305
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+++ G +A LF N G PD L +A E KL +M+
Sbjct: 306 LIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQ 365
Query: 461 IVPN 464
PN
Sbjct: 366 CAPN 369
>gi|302826107|ref|XP_002994593.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
gi|300137364|gb|EFJ04344.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
Length = 521
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 153/337 (45%), Gaps = 15/337 (4%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E+F MQK R Y + + V+ + R A LF ++ C P+ YN +I
Sbjct: 160 ELFVQMQK-RGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVI 218
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ KA +KA ++ M+ C PNI T+ L+ A A+ + F +L E
Sbjct: 219 Y----GKAGEPSKAEMLYRSMR-RAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEF 273
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
PD Y YN +M+AY + G + M+ N C PD ++ N+LI++YG+ ++
Sbjct: 274 DYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDA 333
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
E++FKS+ + P L + ++ Y +A +AE + M P + Y +I
Sbjct: 334 EKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINA 393
Query: 370 YGYCDNVSRAREIFDELSKLGKDM------KVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
YG R ++ L+K+ K + T N +++ Y G A+ LF+
Sbjct: 394 YGVS---GRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPRAEELFQGLAR 450
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+ + PD++T+ L Y K + +LK+M ++G
Sbjct: 451 LKLVPDATTWTALMGGYAKKKLYRKCTSILKKMLESG 487
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 164/374 (43%), Gaps = 35/374 (9%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
W + ++ W+ + + D G Y+ LI GK A F+ M+ + C P+ +
Sbjct: 84 WPRVTQMCEWVLQGTTFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFG 143
Query: 185 ALITAH-------------------------------LHTRDKAKALAKALGYFQKMKGM 213
LI + LH + AK +A F+ ++
Sbjct: 144 VLINGYRLAGSFEKAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKY 203
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
E C+PNI TYN ++ +A + L++ + ++ P+I T+ +M+A+ + G+ +E
Sbjct: 204 E-CEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYRE 262
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
E +++ KPD +N L+++Y + + ++F+++ + P + N +I
Sbjct: 263 AERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILIN 322
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
YG+A L AE +F+ M + ++P+ + +++ Y V A E+ + + G
Sbjct: 323 AYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKP 382
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFEN---SHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
N+++ AY ++G + + L S + PD TY L + Y +A +
Sbjct: 383 DTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPRAE 442
Query: 451 KLLKRMEQNGIVPN 464
+L + + + +VP+
Sbjct: 443 ELFQGLARLKLVPD 456
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 148/318 (46%), Gaps = 8/318 (2%)
Query: 161 TRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNI 220
T++ W+ ++ + RPD YN LI A+ K+ + A F +M+ C PN
Sbjct: 88 TQMCEWV---LQGTTFRPDLGCYNLLIDAY----GKSLNIEDAEKTFNRMQ-EALCVPNE 139
Query: 221 VTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSR 280
T+ +L+ A + ++ LF ++ + +P N + + E++
Sbjct: 140 ETFGVLINGYRLAGSFEKAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRD 199
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
++ +C+P+I T+N +I YGK K E +++S+ + P + TF +++ + + L
Sbjct: 200 LEKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGL 259
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
+AE F K+ Y P Y ++ Y + + A EIF + + G + N
Sbjct: 260 YREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNI 319
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
++ AY GL +A+ +F++ + G +P+ + LL AY +A E ++L+ ME++G
Sbjct: 320 LINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDG 379
Query: 461 IVPNKRFFLEALETFSSS 478
P+ + + + S
Sbjct: 380 TKPDTLIYNSLINAYGVS 397
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 148/308 (48%), Gaps = 11/308 (3%)
Query: 69 KRGRKSEELESKELVRVL--MRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWL 126
KRG L + VL + + E L R L KY + + GK+ +
Sbjct: 167 KRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYGKAGEPS 226
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ ++R M++ + ++ L+ ++G R A F +++ +PD YNAL
Sbjct: 227 KAEMLYRSMRRAMC-PPNICTFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNAL 285
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
+ A+ + + A AL FQ M+ C P+ V++NIL+ A +A + +FK +
Sbjct: 286 MEAY----SQGGSPAGALEIFQTMQ-RNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSM 340
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
+ +P++ + ++ AY + G ++E E ++S M+ + KPD + +N LI++YG
Sbjct: 341 QSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRH 400
Query: 307 DKMEQVFKSLMHS---KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
+ ME + ++ S + KP + T+N++I Y +A +AE +FQ + +K P T+
Sbjct: 401 EDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPRAEELFQGLARLKLVPDATTW 460
Query: 364 ECIITMYG 371
++ Y
Sbjct: 461 TALMGGYA 468
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 84/169 (49%), Gaps = 8/169 (4%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT---RDKAKALAKALGYF 207
L++ + G+ A L S M G +PD +YN+LI A+ + D LAK +
Sbjct: 355 LLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSS 414
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K + KP+I TYN L++ AQA + + LF+ L L PD T+ +M Y K
Sbjct: 415 SK-----QTKPDIGTYNTLIQVYAQAGFIPRAEELFQGLARLKLVPDATTWTALMGGYAK 469
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+ ++ S+L +M + C+ D +T +L + + +++ Q+ +SL
Sbjct: 470 KKLYRKCTSILKKMLESGCRADAVTARVLFSACRSPEQVEQVTQLMESL 518
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 161/358 (44%), Gaps = 17/358 (4%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
LF G DK L K+ I D IY+ LI +KG AM L +EM
Sbjct: 374 LFTRSGNLDKALMYFNSV----KEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQ 429
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQA 233
GC D YN + LH K K L +A F +M ER P+ T IL+ +
Sbjct: 430 GCAMDVVTYNTI----LHGLCKRKMLGEADKLFNEMT--ERGLFPDSYTLTILIDGHCKL 483
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
N+ LFK++ E + D+ TYN ++D +GK G I + + + M S + P I+F
Sbjct: 484 GNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISF 543
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
++L+++ + + +V+ ++ KPT+ NSMI Y ++ E +KM +
Sbjct: 544 SILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMIS 603
Query: 354 MKYTPSFITYECIITMYGYC--DNVSRAREIFDELS--KLGKDMKVSTLNAMLEAYCMNG 409
+ P I+Y +I YG+ +N+S+A + ++ + G V T N++L +C
Sbjct: 604 EGFVPDCISYNTLI--YGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCREN 661
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
EA+ + GV PD STY L + + + M Q G P+ +F
Sbjct: 662 QMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDDKF 719
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 163/350 (46%), Gaps = 12/350 (3%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L K K+ + EVF M + D+ Y L+ KKG +FS+MR+ P
Sbjct: 305 LCKHGKYERAKEVFAEMLRSGLS-PDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVP 363
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNV 236
D ++++++ L TR + L KAL YF +K G+ P+ V Y IL++ + +
Sbjct: 364 DLVCFSSMMS--LFTR--SGNLDKALMYFNSVKEAGL---IPDNVIYTILIQGYCRKGMI 416
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
+ L E+ + A D+ TYN ++ K M+ E + + + M PD T +L
Sbjct: 417 SEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTIL 476
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
ID + K ++FK + + K + T+N+++ +GK A+ ++ M + +
Sbjct: 477 IDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI 536
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
P+ I++ ++ ++S A ++DE+ V N+M++ YC +G ++ ++
Sbjct: 537 LPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEI 596
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME--QNGIVPN 464
E + G PD +Y L + K L+K+ME Q G+VP+
Sbjct: 597 FLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPD 646
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 130/514 (25%), Positives = 214/514 (41%), Gaps = 52/514 (10%)
Query: 3 LTNLSPYSLRLSTLSSSSASSSSSSS------SSSFNQSSSQNYNFTHRHIPLSLRT--- 53
LT P L+T SSSSAS S S S S Q +S N R PL++
Sbjct: 18 LTRFKPLK-TLATSSSSSASDSDSDSFLVEKICFSLKQGNSNVRNHLIRLNPLAVVEVLY 76
Query: 54 RPRTGICCVWTRPRSKRG-----RKSEELESKELVRVLMRS--FSDKEPLVRTLNKYVKV 106
R R + + R + G K L ++ +L+RS SD + V + + V
Sbjct: 77 RCRNDL-SLGQRFVDQLGFNFPNFKHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGV 135
Query: 107 VRSE----------HCF-------LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYS 149
R E +C LL ++ K + E F + + + Y +
Sbjct: 136 SRVEIVNSLVSTYSNCGSNDSVFDLLIRTFVQARKLREAYEAFTLL-RSKGYTVSIDACN 194
Query: 150 KLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQK 209
LI + + G LA ++ E+ SG + N ++ A L K + + L Q+
Sbjct: 195 ALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNA-LCKDGKMEKVGTFLSEVQE 253
Query: 210 MKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG 269
KG+ P+IVTYN L+ A + +++ L + +P +YTYN V++ K+G
Sbjct: 254 -KGV---YPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHG 309
Query: 270 MIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFN 329
+ + V + M + PD T+ L+ K+ + E +F + P L F+
Sbjct: 310 KYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFS 369
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELS 387
SM+ + ++ KA F + P + Y +I GYC +S A + +E+
Sbjct: 370 SMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQ--GYCRKGMISEAMNLRNEML 427
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ G M V T N +L C + EAD LF G+ PDS T +L + K +
Sbjct: 428 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQ 487
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
+L K+M++ KR L+ + T+++ L G
Sbjct: 488 NAMELFKKMKE------KRIKLDVV-TYNTLLDG 514
>gi|42570403|ref|NP_850357.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330254930|gb|AEC10024.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 683
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 164/373 (43%), Gaps = 32/373 (8%)
Query: 135 MQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH---- 190
M+ Q+ Y A IY+ +I + + A LF EM+ C+PD Y+ALI AH
Sbjct: 1 MKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAG 60
Query: 191 -----------------LHTRDKAKALAKALGYFQKMK-GMERCK--------PNIVTYN 224
+R L A G + +E CK P++VT+N
Sbjct: 61 QWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHN 120
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM--K 282
I+L A R + + F+ + + + PD T+N ++ K G + + + M K
Sbjct: 121 IVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREK 180
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
+C+PD++TF ++ Y + + VF++++ KP + ++N+++ Y + G
Sbjct: 181 RAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSG 240
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
A V + P ++Y C++ YG +A+E+F + K + V T NA++
Sbjct: 241 TALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALI 300
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+AY NG EA +F G+ P+ + L A +++ K V +L + GI
Sbjct: 301 DAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGIN 360
Query: 463 PNKRFFLEALETF 475
N + A+ ++
Sbjct: 361 LNTAAYNSAIGSY 373
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 160/362 (44%), Gaps = 50/362 (13%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRN--SGCRPDPSVYNALITAHLHTRDKAKALA 201
DT ++ +I + K GQ+ A+ LF+ MR + CRPD + +++ HL++
Sbjct: 150 DTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIM--HLYSVKGEIENC 207
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+A+ F+ M E KPNIV+YN L+ A A ++ ++ ++ + PD+ +Y +
Sbjct: 208 RAV--FEAMVA-EGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL 264
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+++YG++ + + V M+ + KP+++T+N LID+YG + ++F+ +
Sbjct: 265 LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 324
Query: 322 KPTL-----------------------------------PTFNSMIINYGKARLQGKAEY 346
KP + +NS I +Y A KA
Sbjct: 325 KPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIA 384
Query: 347 VFQKMTAMKYTPSFITYECIIT----MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
++Q M K +T+ +I+ M Y + +S +E+ D L K++ S L
Sbjct: 385 LYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLC--- 441
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
AY G TEA+ +F G PD Y + AY + +L ME NGI
Sbjct: 442 -AYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIE 500
Query: 463 PN 464
P+
Sbjct: 501 PD 502
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 124/275 (45%), Gaps = 6/275 (2%)
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
C N + YN+++R A+ VDQ LF E+ + PD TY+ +++A+G+ G +
Sbjct: 8 CARNDI-YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAM 66
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
+++ M P T+N LI++ G + + +V K + + P L T N ++ Y
Sbjct: 67 NLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAY 126
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK- 394
R KA F+ M K P T+ II S+A ++F+ + + + +
Sbjct: 127 KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRP 186
Query: 395 -VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
V T +++ Y + G +FE G+ P+ +Y L AY M +L
Sbjct: 187 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 246
Query: 454 KRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAK 488
++QNGI+P+ + L ++ S Q G AK
Sbjct: 247 GDIKQNGIIPDVVSYTCLLNSYGRS---RQPGKAK 278
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 125/283 (44%), Gaps = 5/283 (1%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
KQ I D Y+ L+ G+ Q A +F MR +P+ YNALI A+
Sbjct: 250 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAY----GS 305
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
LA+A+ F++M+ + KPN+V+ LL AC++++ V+ + + +
Sbjct: 306 NGFLAEAVEIFRQME-QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTA 364
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
YN + +Y +++ ++ M+ + K D +TF +LI + + + K +
Sbjct: 365 AYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 424
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
T ++S++ Y K +AE +F +M P I Y ++ Y +
Sbjct: 425 EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKW 484
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
+A E+F E+ G + +A++ A+ G P+ +L +
Sbjct: 485 GKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMD 527
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 156/354 (44%), Gaps = 44/354 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y ++ VM K GQT LAM L +M + D Y+ +I K +L A F
Sbjct: 329 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC----KHGSLDNAFNLF 384
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M+ M+ NI+TYNIL+ A D L +++ + + P++ T++ ++D++ K
Sbjct: 385 NEME-MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK 443
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G ++E E + M PD IT+ LID + K DK Q+ ++ P + T
Sbjct: 444 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT 503
Query: 328 FNSMIINYGKAR---------------------------LQGKAEY--------VFQKMT 352
FN +I Y KA +QG E +FQ+M
Sbjct: 504 FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMV 563
Query: 353 AMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
+ K P+ +TY+ I + G CDN +A EIF+++ K ++ + N ++ C
Sbjct: 564 SRKVPPNIVTYK--ILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 621
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+A LF + GV P TY ++ K + L ++ME++G P+
Sbjct: 622 VDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPD 675
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 146/326 (44%), Gaps = 9/326 (2%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
Y +T +S LI + +G+ A+ L M G +PD N L+ + +A+A+
Sbjct: 252 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 311
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
KM C+PN VTY +L ++ L +++ E + D Y+
Sbjct: 312 L----LIDKMVEY-GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 366
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++D K+G + ++ + M+ +IIT+N+LI + +D ++ + ++ K
Sbjct: 367 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 426
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSR 378
P + TF+ +I ++ K +AE + ++M P ITY +I G+C +++ +
Sbjct: 427 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID--GFCKENHLDK 484
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A ++ D + G D + T N ++ YC + LF GV D+ TY L +
Sbjct: 485 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 544
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPN 464
+ + + ++L + M + PN
Sbjct: 545 GFCELGKLNVAKELFQEMVSRKVPPN 570
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 121/266 (45%), Gaps = 5/266 (1%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
R DT Y+ LI K+ A + M + GC P+ +N LI + KA
Sbjct: 459 HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYC----KA 514
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+ L F+KM + + VTYN L++ + ++ LF+E+ + P+I T
Sbjct: 515 NRIDDGLELFRKMS-LRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVT 573
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y ++D NG ++ + +++ ++ + DI +N++I D +F SL
Sbjct: 574 YKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 633
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
KP + T+N MI K +AE +F+KM + P TY +I + + +
Sbjct: 634 LKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDAT 693
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLE 403
++ ++ +EL + G + ST+ +++
Sbjct: 694 KSVKLIEELKRCGFSVDASTIKMVID 719
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 121/273 (44%), Gaps = 1/273 (0%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A+ F+ M R P ++ ++ L A A+ + D V AL K++ +A ++YT + ++
Sbjct: 170 AIDLFRDMI-HSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 228
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+ + + + S + ++ +P+ ITF+ LI+ + ++ ++ K
Sbjct: 229 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 288
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P L T N+++ + + +A + KM P+ +TY ++ + + A E+
Sbjct: 289 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 348
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
++ + + + +++ C +G A LF G+T + TY +L +
Sbjct: 349 LRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCN 408
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
A + KLL+ M + I PN F +++F
Sbjct: 409 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 441
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 135/318 (42%), Gaps = 17/318 (5%)
Query: 164 AMWLFSEMRNSGCRPDPSV--YNALITAHLHTR--DKAKALAKALGYFQKMKGMERCKPN 219
A+ LF +M +S RP P+V ++ L +A T+ D AL K + ++KG+ N
Sbjct: 170 AIDLFRDMIHS--RPLPTVIDFSRLFSAIAKTKQYDLVLALCKQM----ELKGIAH---N 220
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+ T +I++ + R + + ++ + P+ T++ +++ G + E ++
Sbjct: 221 LYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVD 280
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
RM KPD+IT N L++ + + ++ +P T+ ++ K+
Sbjct: 281 RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSG 340
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVST 397
A + +KM + Y II G C + + A +F+E+ G + T
Sbjct: 341 QTALAMELLRKMEERNIKLDAVKYSIIID--GLCKHGSLDNAFNLFNEMEMKGITTNIIT 398
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
N ++ +C G + L + + P+ T+ +L ++ K ++L K M
Sbjct: 399 YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI 458
Query: 458 QNGIVPNKRFFLEALETF 475
GI P+ + ++ F
Sbjct: 459 HRGIAPDTITYTSLIDGF 476
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 161/354 (45%), Gaps = 44/354 (12%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ +I M K A LFSEM + G PD Y+ALI+ L A+
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFC----ILGKLNDAIDL 282
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F KM +E KP++ T+NIL+ A + + + +F + + + P+ TYN +MD Y
Sbjct: 283 FNKMI-LENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYC 341
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL---------- 316
+ + +S+ + M PDI +++++I+ + K + FD+ +FK +
Sbjct: 342 LVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVV 401
Query: 317 ------------------------MHSKE-KPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
MH + PT+ T+NS++ K KA + K+
Sbjct: 402 TYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKL 461
Query: 352 TAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
P+ TY +I G C + + AR++F+ L G ++ V T M++ +C+ G
Sbjct: 462 KDKGIQPNMYTYSILIK--GLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEG 519
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
L EA L + G PD+ TY+++ + K + ++ +KLL+ M G+ P
Sbjct: 520 LFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 148/324 (45%), Gaps = 5/324 (1%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
Y+ DT ++ LI + KGQ + A ++ G D Y LI H K
Sbjct: 151 YVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLI----HGLCKVGET 206
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
AL Q++ G +PN+V YN ++ + + + V++ LF E+ ++PD+ TY+
Sbjct: 207 RAALDLLQRVDG-NLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSA 265
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ + G + + + ++M KPD+ TFN+L++++ K + + VF +M
Sbjct: 266 LISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQG 325
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
KP T+NS++ Y + KA+ +F M P +Y +I + A
Sbjct: 326 IKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAM 385
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+F E+ + V T +++++ +G + A L + H+ GV P TY + A
Sbjct: 386 NLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDAL 445
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
K + + LL +++ GI PN
Sbjct: 446 CKIHQVDKAIALLTKLKDKGIQPN 469
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 157/316 (49%), Gaps = 11/316 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + K G+TR A+ L + + +P+ +YN +I + K K + +A F
Sbjct: 193 YGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMC----KVKLVNEAFDLF 248
Query: 208 QKM--KGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
+M KG+ P++VTY+ L+ C + D ++ K + E+I PD+YT+N +++A
Sbjct: 249 SEMISKGIS---PDVVTYSALISGFCILGKLNDAIDLFNKMILENI-KPDVYTFNILVNA 304
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ K+G +KE ++V M KP+ +T+N L+D Y + +K + +F ++ P
Sbjct: 305 FCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPD 364
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ +++ MI + K + +A +F++M P +TY +I +S A ++ D
Sbjct: 365 IQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVD 424
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
++ G + T N++L+A C +A L + G+ P+ TY +L K ++
Sbjct: 425 QMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSG 484
Query: 445 MKELVQKLLKRMEQNG 460
E +K+ + + G
Sbjct: 485 KLEDARKVFEGLLVKG 500
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 139/329 (42%), Gaps = 17/329 (5%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL-----AKALG 205
LI + G A +F+++ G PD + LI +A ALG
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALG 185
Query: 206 Y-FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
+ F + ++Y L+ + L + + +++ P++ YN ++D+
Sbjct: 186 FHFDQ-----------ISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDS 234
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
K ++ E + S M S PD++T++ LI + + +F ++ KP
Sbjct: 235 MCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPD 294
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ TFN ++ + K + + VF M P+F+TY ++ Y V++A+ IF+
Sbjct: 295 VYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFN 354
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+++ G + + + + M+ +C EA LF+ H + PD TY L +K+
Sbjct: 355 TMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSG 414
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALE 473
+L+ +M G+ P R + L+
Sbjct: 415 RISYALQLVDQMHDRGVPPTIRTYNSILD 443
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 146/343 (42%), Gaps = 21/343 (6%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++K++ + K ++L +M G +P+ N LI + + A F
Sbjct: 88 FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFC----QLGLIPFAFSVF 143
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP----DIYTYNGVMD 263
K+ M P+ +T+ L++ + Q LF H+ ++A D +Y ++
Sbjct: 144 AKILKMGYV-PDTITFTTLIKGLCLKGQIQQA-FLF---HDKVVALGFHFDQISYGTLIH 198
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K G + +L R+ N +P+++ +N +IDS K + ++ +F ++ P
Sbjct: 199 GLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISP 258
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T++++I + A +F KM P T+ ++ + + + +F
Sbjct: 259 DVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVF 318
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
D + K G T N++++ YC+ +A +F GV PD +Y ++ + K
Sbjct: 319 DMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKI 378
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG-SQSG 485
+ L K M + I+P+ + T+SS + G S+SG
Sbjct: 379 KKFDEAMNLFKEMHRKNIIPD-------VVTYSSLIDGLSKSG 414
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 104/254 (40%), Gaps = 12/254 (4%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
K N ++Y+ +VD +LF L P + +N ++ + K+ +
Sbjct: 47 KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+ +M+ KP+++ N+LI+ + + VF ++ P TF ++I
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLI---K 163
Query: 337 KARLQGKAEYVF---QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
L+G+ + F K+ A+ + I+Y +I +G C V R D L ++ ++
Sbjct: 164 GLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLI--HGLC-KVGETRAALDLLQRVDGNL 220
Query: 394 ---KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
V N ++++ C L EA LF + G++PD TY L +
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAI 280
Query: 451 KLLKRMEQNGIVPN 464
L +M I P+
Sbjct: 281 DLFNKMILENIKPD 294
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 90/228 (39%), Gaps = 13/228 (5%)
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+Y+ + N + + S+ +R+ P FN ++ S K + + + + + +
Sbjct: 52 SYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKM 111
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--D 374
KP L N +I + + L A VF K+ M Y P IT+ +I G C
Sbjct: 112 EFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIK--GLCLKG 169
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA-DLLFENSHNMGVTPDSSTY 433
+ +A D++ LG + ++ C G A DLL N+ V P+ Y
Sbjct: 170 QIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNL-VQPNVVMY 228
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
+ + K + L M GI P+ + T+S+ ++G
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPD-------VVTYSALISG 269
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 157/341 (46%), Gaps = 17/341 (4%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG-QTRLAMWLFSEMRN 173
L G+S + ++VF M K + Y+ +I GK G A +F EM
Sbjct: 226 LISAYGRSGYCDEAIKVFETM-KSSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLR 284
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACA 231
+G +PD +N+L L + A F +M +G+E+ +I TYN LL A
Sbjct: 285 NGVQPDRITFNSL----LAVCGRGGLWEAARNLFSEMLYRGIEQ---DIFTYNTLLDAVC 337
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ +D + E+ + P++ TY+ V+D Y K G + E ++ + MK D +
Sbjct: 338 KGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRV 397
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE---YVF 348
++N L+ Y K F++ V K + S K T+N+++ YGK QGK E VF
Sbjct: 398 SYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGK---QGKYEEVKRVF 454
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
++M A + P+ +TY +I +Y A E+F E K G V +A+++A C N
Sbjct: 455 EEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKN 514
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
GL A + G+ P+ TY + A+ ++ E V
Sbjct: 515 GLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAECV 555
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 177/386 (45%), Gaps = 8/386 (2%)
Query: 79 SKELVRVLMRSFSDKEPLVRTL-NKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQK 137
++E +R +R SD + + L N ++ S+ L ELG +W + + F + +
Sbjct: 117 AEEALRHAIRFASDDKGIDSVLLNFESRLCGSDDYTFLLRELGNRGEWAKAIRCFEFAVR 176
Query: 138 QRWYIADTG-IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
+ + G + S +I+++G+ GQ LA +F N G ++ALI+A+ +
Sbjct: 177 REQRRNEQGKLASAMISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAY----GR 232
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR-NVDQVNALFKELHESILAPDI 255
+ +A+ F+ MK KPN+VTYN ++ AC + + ++ +F E+ + + PD
Sbjct: 233 SGYCDEAIKVFETMKS-SGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDR 291
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
T+N ++ G+ G+ + ++ S M + DI T+N L+D+ K D Q+
Sbjct: 292 ITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSE 351
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
+ P + T++++I Y KA +A +F +M ++Y ++++Y
Sbjct: 352 MPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGR 411
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
A + E+ G T NA+L Y G E +FE + P+ TY
Sbjct: 412 FEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYST 471
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGI 461
L Y+K + + ++ + ++ G+
Sbjct: 472 LIDVYSKGGLYQEAMEVFREFKKAGL 497
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 144/323 (44%), Gaps = 40/323 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+++ K G+ A+ + EM +SG + D YNAL+ + K + F
Sbjct: 399 YNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGY----GKQGKYEEVKRVF 454
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++MK ER PN++TY+ L+ ++ + +F+E ++ L D+ Y+ ++DA K
Sbjct: 455 EEMKA-ERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCK 513
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR--------------------QAFD 307
NG+++ S L M +P+++T+N +ID++G+ +
Sbjct: 514 NGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAECVIDPPYETNVSKMSSSSLK 573
Query: 308 KMEQVFKSLMHSKE-KPTLPTFNSMIIN---YGKARLQGKAEY-----VFQKMTAMKYTP 358
+E +S + KE + F + + K +G+ E VF KM + P
Sbjct: 574 VVEDATESEVGDKEDNQIIKIFGQLAAEKTCHAKKENRGRQEILCILAVFHKMHELDIKP 633
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+ +T+ I+ C++ A + +EL +L + + +L Y N + +A LF
Sbjct: 634 NVVTFSAILNACSRCNSFEDASMLLEEL-RLFDNQVYGVAHGLLMGYGDN-VWVQAQSLF 691
Query: 419 ENSHNMGVTPDSSTYKLLYKAYT 441
+ M DSST Y A T
Sbjct: 692 DEVKQM----DSSTASAFYNALT 710
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY-TYNGVM 262
L F KM ++ KPN+VT++ +L AC++ + + + L +EL + +Y +G++
Sbjct: 620 LAVFHKMHELD-IKPNVVTFSAILNACSRCNSFEDASMLLEELR--LFDNQVYGVAHGLL 676
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID---SYGKRQA 305
YG N + + +S+ +K +N L D +G+R+
Sbjct: 677 MGYGDNVWV-QAQSLFDEVKQMDSSTASAFYNALTDMLWHFGQRRG 721
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 175/399 (43%), Gaps = 13/399 (3%)
Query: 72 RKSE--ELESKELVRVLMRSFSDKEPLVRTLNKYVK----VVRSEHCFLLFEELGKSDKW 125
RKS +L S E+ RVLM SF D + V +E C + E L K
Sbjct: 78 RKSSKPDLSSSEVARVLM-SFPDTDSSFSYFKSVAGNSNLVHTTETCNYMLEALRVDGKI 136
Query: 126 LQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
+ VF MQK R DT Y + + KG R A + +MR G + YN
Sbjct: 137 EEMAYVFDLMQK-RIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNG 195
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
LI L K++ +A+ +++M ++ +P++ TY+ L+ + R+++ V L KE
Sbjct: 196 LIHLLL----KSRFCTEAMEVYRRMI-LDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKE 250
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ L P++YT+ + G+ G I E +L RM C PD++T+ +LID+ +
Sbjct: 251 METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 310
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
D ++VF + + KP T+ +++ + R + +M + P +T+
Sbjct: 311 LDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTI 370
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
++ N A D + G + T N ++ +A +F+N ++G
Sbjct: 371 LVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLG 430
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
V P + TY + Y K+ + ++M+ GI PN
Sbjct: 431 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPN 469
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 152/326 (46%), Gaps = 42/326 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + + +A +F +++N+GC PD + YN L+ A+ K+ + + +
Sbjct: 790 YNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAY----GKSGKIDELFEIY 845
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL-HESILAPDIYTYNGVMDAYG 266
++M E C+PN +T+NI++ +A NVD L+ +L + +P TY ++D
Sbjct: 846 KEMSAHE-CEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 904
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K+G + E + + M C+P+ +N+LI+ +GK D +FK ++ +P L
Sbjct: 905 KSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 964
Query: 327 TFN----------------------------------SMIIN-YGKARLQGKAEYVFQKM 351
T++ ++IIN GK +A +F +M
Sbjct: 965 TYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEM 1024
Query: 352 TAMK-YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
+ TP TY +I G V A +I++E+ + G + V T NA++ Y ++G
Sbjct: 1025 KKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1084
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLL 436
P A +++ G +P++ TY+ L
Sbjct: 1085 PEHAYAVYQTMVTGGFSPNTGTYEQL 1110
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 151/340 (44%), Gaps = 7/340 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K+ + + M+ Q + + Y+ LI + + + A+ +F M +
Sbjct: 370 ILVDALCKAGNFGEAFAKLDVMRDQ-GILPNLHTYNTLICGLLRVHRLDDALEIFDNMES 428
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G +P Y I + + D AL F+KMK + PNIV N L + A+A
Sbjct: 429 LGVKPTAYTYIVFIDYYGKSGDSVSALET----FEKMK-TKGIAPNIVACNASLYSLAKA 483
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ +F L + L PD TYN +M Y K G I E +LS M N C+PD+I
Sbjct: 484 GRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVV 543
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N LI++ K D+ ++F + K KPT+ T+N+++ GK +A +F+ M
Sbjct: 544 NSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQ 603
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P+ IT+ + D V+ A ++ ++ +G V T N ++ NG E
Sbjct: 604 KGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKE 663
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
A F + V PD T L KA + E K++
Sbjct: 664 AMCFFHQMKKL-VYPDFVTLCTLLPGVVKAGLIEDAYKII 702
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 137/319 (42%), Gaps = 44/319 (13%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALG 205
++ I V+G+ G+ A + M + GC PD Y LI A R D AK +
Sbjct: 263 FTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEV----- 317
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
F KMK R KP+ VTY LL + R++D VN + E+ + PD+ T+ ++DA
Sbjct: 318 -FAKMK-TGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDAL 375
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G E + L M+ P++ T+N LI + D ++F ++ KPT
Sbjct: 376 CKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTA 435
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+ I YGK+ A F+KM P+ + C ++Y
Sbjct: 436 YTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVA--CNASLY--------------S 479
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
L+K G+D EA +F ++G+ PDS TY ++ K Y+K
Sbjct: 480 LAKAGRD-------------------REAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE 520
Query: 446 KELVQKLLKRMEQNGIVPN 464
+ KLL M +N P+
Sbjct: 521 IDEAIKLLSEMVENCCEPD 539
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 135/301 (44%), Gaps = 8/301 (2%)
Query: 168 FSE--MRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNI 225
FSE + N CR S+ +I + + A F+K +P + TYN+
Sbjct: 737 FSERLVANGICRDGDSILVPIIRYSFKHNNASGARM----LFEKFTKDLGVQPKLPTYNL 792
Query: 226 LLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ 285
L+ +A ++ +F ++ + PD+ TYN ++DAYGK+G I E+ + M +++
Sbjct: 793 LIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHE 852
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-KPTLPTFNSMIINYGKARLQGKA 344
C+P+ IT N++I K D ++ LM ++ PT T+ +I K+ +A
Sbjct: 853 CEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEA 912
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
+ +F+ M+ P+ Y +I +G A +F + K G + T + +++
Sbjct: 913 KQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDC 972
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN-GIVP 463
CM G E F G+ PD Y L+ K + E L M+++ GI P
Sbjct: 973 LCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITP 1032
Query: 464 N 464
+
Sbjct: 1033 D 1033
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 169/402 (42%), Gaps = 66/402 (16%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAV------MGKKGQTRLAMWLFSEMRN 173
GKS + LE F M+ + GI ++A + K G+ R A +F +++
Sbjct: 446 GKSGDSVSALETFEKMKTK-------GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKD 498
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERC-KPNIVTYNILLRACAQ 232
G PD YN ++ + K + +A+ +M +E C +P+++ N L+ +
Sbjct: 499 IGLVPDSVTYNMMMKCY----SKVGEIDEAIKLLSEM--VENCCEPDVIVVNSLINTLYK 552
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
A VD+ +F + E L P + TYN ++ GKNG I+E + M C P+ IT
Sbjct: 553 ADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTIT 612
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
FN L D K ++ +M P + T+N++I K +A F +M
Sbjct: 613 FNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK 672
Query: 353 AMKYTPSFIT-----------------YECIITMYGYCDNVSRAREIFDE------LSKL 389
+ Y P F+T Y+ I C + +F E L++
Sbjct: 673 KLVY-PDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSC--ADQPANLFWEDLMGSILAEA 729
Query: 390 GKDMKVSTLNAML-EAYCMNG----LP-----------TEADLLFEN-SHNMGVTPDSST 432
G D VS ++ C +G +P + A +LFE + ++GV P T
Sbjct: 730 GIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPT 789
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK---RFFLEA 471
Y LL +A+M E+ Q + +++ G +P+ F L+A
Sbjct: 790 YNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDA 831
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 171/394 (43%), Gaps = 56/394 (14%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L LGK+ K + +E+F M Q+ +T ++ L + K + LA+ + +M +
Sbjct: 581 LLAGLGKNGKIQEAIELFEGMV-QKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDM 639
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC PD YN +I + K + +A+ +F +MK + P+ VT LL +A
Sbjct: 640 GCVPDVFTYNTIIFGLV----KNGQVKEAMCFFHQMKKL--VYPDFVTLCTLLPGVVKAG 693
Query: 235 NVDQV----------------NALFKELHESILAPDIYTYNGVMDAYG------KNGMIK 272
++ N +++L SILA G+ +A NG+ +
Sbjct: 694 LIEDAYKIIANFLYSCADQPANLFWEDLMGSILAE-----AGIDNAVSFSERLVANGICR 748
Query: 273 EMESVL---------------SRM------KSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
+ +S+L +RM K +P + T+NLLI + + +
Sbjct: 749 DGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQD 808
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
VF + ++ P + T+N ++ YGK+ + ++++M+A + P+ IT+ +I+
Sbjct: 809 VFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLV 868
Query: 372 YCDNVSRAREIF-DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
NV A +++ D +S T +++ +G EA LFE + G P+
Sbjct: 869 KAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNC 928
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ Y +L + KA + L KRM + G+ P+
Sbjct: 929 AIYNILINGFGKAGEADAACALFKRMVKEGVRPD 962
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 121/298 (40%), Gaps = 5/298 (1%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
+SEM G PD + L+ A + +A AK M+ + PN+ TYN L
Sbjct: 352 FWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAK----LDVMRD-QGILPNLHTYNTL 406
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+ + +D +F + + P YTY +D YGK+G +MK+
Sbjct: 407 ICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 466
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
P+I+ N + S K + +Q+F L P T+N M+ Y K +A
Sbjct: 467 APNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIK 526
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+ +M P I +I D V A ++F + ++ V T N +L
Sbjct: 527 LLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLG 586
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
NG EA LFE G P++ T+ L+ K + L K+L +M G VP+
Sbjct: 587 KNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPD 644
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 107/261 (40%), Gaps = 9/261 (3%)
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
TY + + + + Q +++ E + Y+YNG++ K+ E V RM
Sbjct: 157 TYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRM 216
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
+ +P + T++ L+ GKR+ + + + K + KP + TF I G+A
Sbjct: 217 ILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKI 276
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
+A + ++M P +TY +I + A+E+F ++ T +
Sbjct: 277 NEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITL 336
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA-NMKELVQKLLKRMEQNG 460
L+ + N + + G PD T+ +L A KA N E K L M G
Sbjct: 337 LDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAK-LDVMRDQG 395
Query: 461 IVPNKRFFLEALETFSSSLAG 481
I+PN L T+++ + G
Sbjct: 396 ILPN-------LHTYNTLICG 409
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
L+ LGK + + L +F M+K R D Y+ LI +G G A +++E++
Sbjct: 1003 LIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQR 1062
Query: 174 SGCRPDPSVYNALITAH 190
+G P+ +NALI +
Sbjct: 1063 AGLEPNVFTFNALIRGY 1079
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 156/323 (48%), Gaps = 15/323 (4%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA---HLHTRDKAKALAKA 203
IY+ +I + A+ LF+EM N G RP+ YN+LI + D ++ L+
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ + PN+VT++ L+ A + + + L+ E+ + + PDI+TY+ +++
Sbjct: 318 IE--------RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 369
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ + + E + + M S C P+++T+N LI + K + D+ ++F+ +
Sbjct: 370 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG 429
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRARE 381
T+ ++I + +AR A+ VF++M + P +TY I + G C+N V A
Sbjct: 430 NTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYS--ILLDGLCNNGKVETALV 487
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+F+ L + + + T N M+E C G + LF + GV P+ TY + +
Sbjct: 488 VFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 547
Query: 442 KANMKELVQKLLKRMEQNGIVPN 464
+ +KE L + M++ G +P+
Sbjct: 548 RKGLKEEADALFREMKEEGPLPD 570
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 136/311 (43%), Gaps = 44/311 (14%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH-LHTR-DKAKALAKALG 205
+S LI K+G+ A L+ EM PD Y++LI +H R D+AK +
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM----- 383
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
F+ M + C PN+VTYN L++ +A+ VD+ LF+E+ + L + TY ++ +
Sbjct: 384 -FELMISKD-CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGF 441
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ + V +M S+ PDI+T+++L+D + VF+ L SK +P +
Sbjct: 442 FQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDI 501
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+N MI KA GK E ++F
Sbjct: 502 YTYNIMIEGMCKA---GKVE--------------------------------DGWDLFCS 526
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
LS G V T M+ +C GL EAD LF G PDS TY L +A+ +
Sbjct: 527 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGD 586
Query: 446 KELVQKLLKRM 456
K +L++ M
Sbjct: 587 KAASAELIREM 597
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 147/324 (45%), Gaps = 5/324 (1%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
Y D+ ++ LI + + + A+ L M GC+PD Y ++ D +
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD----I 237
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
AL +KM+ + +P +V YN ++ A +NV+ LF E+ + P++ TYN
Sbjct: 238 DLALSLLKKME-QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ G + +LS M + P+++TF+ LID++ K + E+++ ++
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P + T++S+I + +A+++F+ M + P+ +TY +I + V
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
E+F E+S+ G T ++ + A ++F+ + GV PD TY +L
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGL 476
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
E + + ++++ + P+
Sbjct: 477 CNNGKVETALVVFEYLQRSKMEPD 500
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 157/366 (42%), Gaps = 46/366 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+SKL++ + K + L + L +M+N G + Y+ LI + L+ AL
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFC----RRSQLSLALAVL 139
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
KM + +P+IVT N LL + +L ++ E PD +T+N ++ +
Sbjct: 140 AKMMKLGY-EPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD-------KMEQ--------- 311
+ E +++ RM C+PD++T+ ++++ KR D KMEQ
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 312 -------------------VFKSLMHSKEKPTLPTFNSMI---INYGKARLQGKAEYVFQ 349
+F + + +P + T+NS+I NYG+ A +
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR---WSDASRLLS 315
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
M K P+ +T+ +I + + A +++DE+ K D + T ++++ +CM+
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFL 469
EA +FE + P+ TY L K + KA + +L + M Q G+V N +
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 470 EALETF 475
+ F
Sbjct: 436 TLIHGF 441
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 142/303 (46%), Gaps = 9/303 (2%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ L +M G +PD +N LI H R + A AL +KG C+P++VTY
Sbjct: 170 AVSLVGQMVEMGYQPDSFTFNTLI--HGLFRHNRASEAVALVDRMVVKG---CQPDLVTY 224
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
I++ + ++D +L K++ + + P + YN ++DA + + ++ + M +
Sbjct: 225 GIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDN 284
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+P+++T+N LI + ++ ++ K P + TF+++I + K +
Sbjct: 285 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 344
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM--KVSTLNAM 401
AE ++ +M P TY +I + D + A+ +F+ + + KD V T N +
Sbjct: 345 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM--ISKDCFPNVVTYNTL 402
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
++ +C E LF G+ ++ TY L + +A + Q + K+M +G+
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGV 462
Query: 462 VPN 464
+P+
Sbjct: 463 LPD 465
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 114/260 (43%), Gaps = 4/260 (1%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+IV ++ LL A A+ D V +L +++ ++ ++YTY+ +++ + + + +V
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L++M +PDI+T N L++ + + ++ +P TFN++I +
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKV 395
+A + +M P +TY ++ G C ++ A + ++ + + V
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVN--GLCKRGDIDLALSLLKKMEQGKIEPGV 256
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
N +++A C +A LF N G+ P+ TY L + +LL
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316
Query: 456 MEQNGIVPNKRFFLEALETF 475
M + I PN F ++ F
Sbjct: 317 MIERKINPNVVTFSALIDAF 336
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 13/153 (8%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VF+ M + D YS L+ + G+ A+ +F ++ S PD YN +I
Sbjct: 453 VFKQMVSD-GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
KA + F + ++ KPN+VTY ++ + ++ +ALF+E+ E
Sbjct: 512 C----KAGKVEDGWDLFCSLS-LKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Query: 251 LAPDIYTYNGVMDAYGKNG-------MIKEMES 276
PD TYN ++ A+ ++G +I+EM S
Sbjct: 567 PLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 87/228 (38%), Gaps = 1/228 (0%)
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
D VN LF ++ +S P I ++ ++ A K + S+ +M++ ++ T+++L
Sbjct: 64 DAVN-LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
I+ + +R V +M +P + T NS++ + A + +M M Y
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
P T+ +I + S A + D + G + T ++ C G A
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L + + P Y + A L M+ GI PN
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 156/350 (44%), Gaps = 29/350 (8%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI----------TAHLHT 193
D+ YS LI K + A L EM G P +VYN +I +A +H
Sbjct: 32 DSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHY 91
Query: 194 RDKAKALAKA-LGYFQKMKGMER------------------CKPNIVTYNILLRACAQAR 234
RD + A + + Y + + + C PN+VTYN L+ +
Sbjct: 92 RDMQRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLG 151
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
N+D+ LF ++ E+ +PD++TYN ++D Y K ++ +L M C+P+ IT+N
Sbjct: 152 NMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYN 211
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
L+DS K + + + ++ KP+ TFN MI + K A +FQ MT
Sbjct: 212 TLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDR 271
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P TY +I+ + + AR++ + +++ G V T N+++ C EA
Sbjct: 272 GCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEA 331
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
++E N G D T L K+ + +KLL+ ME+NG P+
Sbjct: 332 YEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPD 381
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 145/335 (43%), Gaps = 9/335 (2%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
+ + QR Y+ L+ + K + A + +M +GC P+ YN LI
Sbjct: 88 LVHYRDMQRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGF 147
Query: 191 LHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRA-CAQARNVDQVNALFKELHE 248
K + +A+ F +M +E C P++ TYNIL+ C Q R D L +E+ +
Sbjct: 148 C----KLGNMDEAVVLFNQM--LENSCSPDVFTYNILIDGYCKQERPQDGAK-LLQEMVK 200
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
P+ TYN +MD+ K+G + ++ M CKP TFNL+ID + K D
Sbjct: 201 YGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDL 260
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
++F+ + P + T+N MI +A A + ++MT P +TY I++
Sbjct: 261 AYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVS 320
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
V A E+++ L G + V T + +++ C + +A+ L G P
Sbjct: 321 GLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAP 380
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
D Y +L + KA+ + M G VP
Sbjct: 381 DVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVP 415
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 137/320 (42%), Gaps = 17/320 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL---HTRDKAKALAKAL 204
Y+ LI K G A+ LF++M + C PD YN LI + +D AK L + +
Sbjct: 140 YNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMV 199
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQA-RNVDQVNALFKELHESILAPDIYTYNGVMD 263
Y C+PN +TYN L+ + ++ + +D N L + + P +T+N ++D
Sbjct: 200 KY--------GCEPNFITYNTLMDSLVKSGKYIDAFN-LAQMMLRRDCKPSHFTFNLMID 250
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ K G + + M C PDI T+N++I + D Q+ + + + P
Sbjct: 251 MFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPP 310
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRARE 381
+ T+NS++ KA +A V++ + Y +T C + G C + + A +
Sbjct: 311 DVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVT--CSTLIDGLCKSRRLDDAEK 368
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ E+ + G V ++ +C ++ F + G P TY ++
Sbjct: 369 LLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLC 428
Query: 442 KANMKELVQKLLKRMEQNGI 461
K+ LLK M + G+
Sbjct: 429 KSARVRDGCMLLKTMLERGV 448
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 121/312 (38%), Gaps = 73/312 (23%)
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK---------------- 267
N LL A + + + LFK + +PD TY+ +++ + K
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 268 ----------NGMIK------EMESVLSRMKSNQ--CKPDIITFNLLIDSYGKRQAFDKM 309
N +IK ++S L + Q C P +IT+ +L+D+ K
Sbjct: 62 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDA 121
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
+ + ++ + P + T+N++I + K +A +F +M +P TY +I
Sbjct: 122 SLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID- 180
Query: 370 YGYC------DNVSRARE---------------IFDELSKLGK--------------DMK 394
GYC D +E + D L K GK D K
Sbjct: 181 -GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCK 239
Query: 395 VS--TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
S T N M++ +C G A LF+ + G PD TY ++ +AN + ++L
Sbjct: 240 PSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQL 299
Query: 453 LKRMEQNGIVPN 464
L+RM + G P+
Sbjct: 300 LERMTEAGCPPD 311
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 16/178 (8%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E+F+ M R + D Y+ +I+ + + A L M +GC PD YN++++
Sbjct: 263 ELFQLM-TDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSG 321
Query: 190 HLHTR--DKAKALAKAL---GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
D+A + + L GYF ++VT + L+ ++R +D L +
Sbjct: 322 LCKASQVDEAYEVYEVLRNGGYFL----------DVVTCSTLIDGLCKSRRLDDAEKLLR 371
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
E+ + APD+ Y ++ + K + + + S M C P +IT++++ID K
Sbjct: 372 EMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCK 429
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%)
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N +L A+ EA LF+N +PDS TY L + KA + +LL ME+
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 459 NGIVPNKRFF 468
GIVP+ +
Sbjct: 62 RGIVPHNAVY 71
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 156/339 (46%), Gaps = 22/339 (6%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y +I + K G LF EM+ G PD Y+++I HT A G F
Sbjct: 241 YCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHT----GRWEGAKGLF 296
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M E PN+VT+N+L+ A +A +++ N L K + + +PD +TYN ++D +
Sbjct: 297 NEMVD-EGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCL 355
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G I + + M+S + D +++N+LI+ Y K + +++++ +M + PT+ T
Sbjct: 356 EGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVIT 415
Query: 328 FNSMIINY---GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREI 382
+N+++ GK R A +F +M TP TY I + G C N +S A E+
Sbjct: 416 YNTLLTGLFREGKVR---DAWNLFGEMKVHDLTPESCTYN--ILLDGLCKNNHLSEAMEL 470
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
F L + N +++ C A LF + G+ P+ TY ++ K
Sbjct: 471 FHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCK 530
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
+ E + L ME+ G PN L TF++ + G
Sbjct: 531 SGQLENAKDLFLGMEEKGCAPN-------LVTFNTLMRG 562
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 147/322 (45%), Gaps = 21/322 (6%)
Query: 133 RWMQKQRWY--IADTGI------YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
RW + + + D G+ ++ LI + K G+ A L M G PD YN
Sbjct: 288 RWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYN 347
Query: 185 ALITAH-LHTR-DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL 242
LI L R D A+ L ++ + KG+E + V+YN+L+ ++ + + L
Sbjct: 348 TLIDGFCLEGRIDDARDLFVSM----ESKGIET---DAVSYNVLINGYCKSGRMVEAKKL 400
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
++E+ + P + TYN ++ + G +++ ++ MK + P+ T+N+L+D K
Sbjct: 401 YREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCK 460
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ ++F L + +P++ FN +I KAR A +F +++ P+ IT
Sbjct: 461 NNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVIT 520
Query: 363 YECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
Y +I +G C + A+++F + + G + T N ++ +C N + L +
Sbjct: 521 YTVMI--HGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQE 578
Query: 421 SHNMGVTPDSSTYKLLYKAYTK 442
+PD+ST ++ +K
Sbjct: 579 MAEKDFSPDASTISIVVDLLSK 600
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 131/317 (41%), Gaps = 25/317 (7%)
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITA-HLHTRDKAKALAKALGYFQKMKGMERCKP 218
+ + + EM G P+ + +L+ L +R +++A G +KM M +P
Sbjct: 142 KVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSR-----ISEATGLLRKMVRMGY-RP 195
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESIL----------APDIYTYNGVMDAYGKN 268
N+VTY LL N L +LHE +L P++ Y ++D+ K+
Sbjct: 196 NVVTYGTLLNGLCMTGNT----MLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKD 251
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
G+I + + + MK PD++ ++ +I ++ + +F ++ P + TF
Sbjct: 252 GLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTF 311
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDEL 386
N +I KA +A ++ + M +P TY +I G+C + AR++F +
Sbjct: 312 NVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLID--GFCLEGRIDDARDLFVSM 369
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
G + + N ++ YC +G EA L+ + P TY L +
Sbjct: 370 ESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKV 429
Query: 447 ELVQKLLKRMEQNGIVP 463
L M+ + + P
Sbjct: 430 RDAWNLFGEMKVHDLTP 446
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 111/276 (40%), Gaps = 19/276 (6%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
++A F + M+ P I ++N LL A A+ + V +L+K + LAPD T N
Sbjct: 74 SEAFSVFNHLIDMQPTPP-ISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNI 132
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
+++ Y + +VL M P+ +TF L+ + + + ++
Sbjct: 133 LINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMG 192
Query: 321 EKPTLPTFNSMI------------INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+P + T+ +++ + + L G + + P+ + Y II
Sbjct: 193 YRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGF------GVTIKPNLVCYCTIID 246
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
+ + +E+F E+ G V ++++ C G A LF + GV P
Sbjct: 247 SLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHP 306
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ T+ +L A KA E LLK M Q G P+
Sbjct: 307 NVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPD 342
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 10/192 (5%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
LF E D W +F M K ++ Y+ L+ + K AM LF + N
Sbjct: 423 LFREGKVRDAW----NLFGEM-KVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENH 477
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
+P ++N LI KA+ + A F ++ E +PN++TY +++ ++
Sbjct: 478 DFQPSIQIFNCLIDGLC----KARKIEIARELFNRLS-HEGLEPNVITYTVMIHGLCKSG 532
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
++ LF + E AP++ T+N +M + +N ++++ +L M PD T +
Sbjct: 533 QLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTIS 592
Query: 295 LLIDSYGKRQAF 306
+++D K + +
Sbjct: 593 IVVDLLSKDEKY 604
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 158/365 (43%), Gaps = 20/365 (5%)
Query: 111 HCFL----------LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQ 160
HCF F +LG+ D +Q L + + Q T IY+ LIA+ K
Sbjct: 1215 HCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQ----PTTKIYTMLIALFFKFND 1270
Query: 161 TRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNI 220
A+ LF EMR+ CRPD Y LI KA + +A +F +M+ E C+P+
Sbjct: 1271 AHGALSLFEEMRHQYCRPDVFTYTELIRG----LGKAGRIDEAYHFFCEMQ-REGCRPDT 1325
Query: 221 VTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA-YGKNGMIKEMESVLS 279
V N ++ +A +D LF+E+ P + TYN ++ A + E+ S
Sbjct: 1326 VFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFE 1385
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
RMK + P T+++LID + K +K + + + P + S+I GKA+
Sbjct: 1386 RMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAK 1445
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLN 399
A +FQ++ + S Y +I G + A +FDE++KLG V N
Sbjct: 1446 RYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYN 1505
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
A++ G+ EA G PD ++Y ++ K ++L M+Q+
Sbjct: 1506 ALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQS 1565
Query: 460 GIVPN 464
+ P+
Sbjct: 1566 TVRPD 1570
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 155/333 (46%), Gaps = 7/333 (2%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L +F M+ Q + D Y++LI +GK G+ A F EM+ GCRPD N +I
Sbjct: 1275 LSLFEEMRHQ-YCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMI- 1332
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN-VDQVNALFKELH 247
+ KA L A+ FQ+M+ + RC P++VTYN +++A ++++ +V + F+ +
Sbjct: 1333 ---NFLGKAGRLDDAMKLFQEMETL-RCIPSVVTYNTIIKALFESKSRASEVPSWFERMK 1388
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
ES ++P +TY+ ++D + K +++ +L M P + LID+ GK + +D
Sbjct: 1389 ESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYD 1448
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
++F+ L + + + MI + GKA A +F +M + P Y ++
Sbjct: 1449 LACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALM 1508
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
+ + A + + G +++ N +L G P A + N V
Sbjct: 1509 SGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVR 1568
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
PD +Y + A + A M E KL+K M G
Sbjct: 1569 PDVVSYNTVLGALSHAGMFEEASKLMKEMNTLG 1601
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 160/396 (40%), Gaps = 48/396 (12%)
Query: 104 VKVVRSEHCFLLFEELGKSDKWLQC-LEVFRWMQKQRWYIADTGIY-------------- 148
V ++R +H L E+ K+D + ++ FRW K+R Y DT Y
Sbjct: 1073 VLMLRVDH--WLVREVMKTDVGVNVKMQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYG 1130
Query: 149 ----------------------SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
S ++ ++G R A+ +F +++ C+P YN++
Sbjct: 1131 EMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSM 1190
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I +H K + +M C P+ VTY+ L+ A + D L E+
Sbjct: 1191 IIMLMHE----GQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEM 1246
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
E + P Y ++ + K S+ M+ C+PD+ T+ LI GK
Sbjct: 1247 KEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRI 1306
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
D+ F + +P N+MI GKA A +FQ+M ++ PS +TY I
Sbjct: 1307 DEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTI 1366
Query: 367 ITMYGYCDNVSRAREI---FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
I ++ SRA E+ F+ + + G T + +++ +C +A +L E
Sbjct: 1367 IK--ALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDE 1424
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
G P + Y L A KA +L +L + +++N
Sbjct: 1425 KGFPPCPAAYCSLIDALGKAKRYDLACELFQELKEN 1460
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 133/288 (46%), Gaps = 31/288 (10%)
Query: 95 PLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI------Y 148
P V T N +K LFE ++ EV W ++ + ++GI Y
Sbjct: 1358 PSVVTYNTIIKA--------LFESKSRAS------EVPSWFERMK----ESGISPSSFTY 1399
Query: 149 SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQ 208
S LI K + AM L EM G P P+ Y +LI A KAK A FQ
Sbjct: 1400 SILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDA----LGKAKRYDLACELFQ 1455
Query: 209 KMKGMERCKPNIV-TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++K E C + Y ++++ +A +D +F E+++ APD+Y YN +M +
Sbjct: 1456 ELK--ENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLAR 1513
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
GM+ E S + RM+ + C PDI ++N++++ K + ++ ++ S +P + +
Sbjct: 1514 TGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVS 1573
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
+N+++ A + +A + ++M + + ITY I+ G D+
Sbjct: 1574 YNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKVDH 1621
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 133/330 (40%), Gaps = 5/330 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L LGK+ + + F MQ++ DT + +I +GK G+ AM LF EM
Sbjct: 1296 LIRGLGKAGRIDEAYHFFCEMQREGCR-PDTVFMNNMINFLGKAGRLDDAMKLFQEMETL 1354
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
C P YN +I A ++ +A + +F++MK P+ TY+IL+ +
Sbjct: 1355 RCIPSVVTYNTIIKALFESKSRASEVPS---WFERMK-ESGISPSSFTYSILIDGFCKTN 1410
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+++ L +E+ E P Y ++DA GK + +K N +
Sbjct: 1411 RMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYA 1470
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++I GK D +F + P + +N+++ + + +A ++M
Sbjct: 1471 VMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEH 1530
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P +Y I+ RA E+ + + V + N +L A G+ EA
Sbjct: 1531 GCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEA 1590
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
L + + +G D TY + +A K +
Sbjct: 1591 SKLMKEMNTLGFEYDLITYSSILEAIGKVD 1620
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/236 (19%), Positives = 96/236 (40%), Gaps = 9/236 (3%)
Query: 236 VDQVNALFKELHESILAPDIYT----YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
V+Q ++K + E + P + V+ G M+++ ++ ++K+ +C+P
Sbjct: 1126 VEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQ 1185
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP---TFNSMIINYGKARLQGKAEYVF 348
+N +I ++K+ Q++ + S E P T++++I + K + A +
Sbjct: 1186 AYNSMIIMLMHEGQYEKVHQLYNEM--STEGHCFPDTVTYSALISAFCKLGRRDSAIQLL 1243
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
+M + P+ Y +I ++ ++ A +F+E+ V T ++
Sbjct: 1244 NEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKA 1303
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G EA F G PD+ + KA + KL + ME +P+
Sbjct: 1304 GRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPS 1359
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 154/338 (45%), Gaps = 7/338 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +IA + + G+ A+ +F EM + G P+ YN +I H+ D
Sbjct: 198 YNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQML 257
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
Q + KPN+VTYN+LL +A +D+ AL E+ + PD +TY+ + D +
Sbjct: 258 QDGR-----KPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTR 312
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + M S+ T ++L++ K K EQV + L+H+ PT
Sbjct: 313 TGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAI 372
Query: 328 FNSMIINYGKAR-LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
+N++I Y + R LQG A +F++M + P ITY +I + ++ A ++ E+
Sbjct: 373 YNTLINGYCQVRDLQG-AFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEM 431
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
K G D V T N +++AY G + + + + G+ + ++ + KA+ K
Sbjct: 432 EKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKI 491
Query: 447 ELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQS 484
+L M +VPN + + ++ + S Q+
Sbjct: 492 PEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQA 529
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 161/359 (44%), Gaps = 14/359 (3%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMG--KKGQTRLAMWLFSEM 171
+LF+ L ++ L +F K+ I G Y+ I + G K G+ A + +
Sbjct: 305 ILFDGLTRTGDSRTMLSLFGESLKKGVII---GAYTCSILLNGLCKDGKVAKAEQVLEML 361
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
++G P ++YN LI + RD L A F++MK +P+ +TYN L+
Sbjct: 362 VHTGLVPTTAIYNTLINGYCQVRD----LQGAFSIFEQMKS-RHIRPDHITYNALINGLC 416
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ + + L E+ +S + P + T+N ++DAYG+ G +++ +VLS M+ K ++I
Sbjct: 417 KMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVI 476
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
+F ++ ++ K + + ++H P +NS+I Y ++ +A + +KM
Sbjct: 477 SFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKM 536
Query: 352 TAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
+ + S TY ++ G C N + A E+ L+ G V + N ++ A C G
Sbjct: 537 KSSGVSASIFTYNLLLK--GLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKG 594
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
A L + H + P TY L A A ++ L + M + P+ +
Sbjct: 595 DTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIY 653
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 138/337 (40%), Gaps = 5/337 (1%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ D YS L + + G +R + LF E G Y I + +D A A
Sbjct: 297 LPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVII--GAYTCSILLNGLCKDGKVAKA 354
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+ + G+ P YN L+ Q R++ ++F+++ + PD TYN +
Sbjct: 355 EQVLEMLVHTGL---VPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNAL 411
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
++ K MI E E ++ M+ + P + TFN LID+YG+ +K V +
Sbjct: 412 INGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGI 471
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
K + +F S++ + K +A + M P+ Y II Y +A
Sbjct: 472 KSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFL 531
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ +++ G + T N +L+ C N EA+ L N N G+ PD +Y + A
Sbjct: 532 LVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACC 591
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ +LL+ M + I P R + L S+
Sbjct: 592 NKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSA 628
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 136/325 (41%), Gaps = 12/325 (3%)
Query: 155 MGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME 214
+G+ R A F + +G RPD +N + A + D L +AL ++M E
Sbjct: 136 VGRHADVRAA---FGLLVAAGARPDTFAWNKAVQACVAAGD----LDEALAMLRRMGRSE 188
Query: 215 RCKP-NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
P + +YN+++ ++ +F E+ + +AP+ TYN ++D + K G ++
Sbjct: 189 GAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEA 248
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
+ +M + KP+++T+N+L+ + D+ + + P F I+
Sbjct: 249 GFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPD--GFTYSIL 306
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGK 391
G R + ++K Y C I + G C + V++A ++ + L G
Sbjct: 307 FDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGL 366
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
+ N ++ YC A +FE + + PD TY L K M +
Sbjct: 367 VPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAED 426
Query: 452 LLKRMEQNGIVPNKRFFLEALETFS 476
L+ ME++G+ P+ F ++ +
Sbjct: 427 LVMEMEKSGVDPSVETFNTLIDAYG 451
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 113/266 (42%), Gaps = 32/266 (12%)
Query: 78 ESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQK 137
E+++LV + +S D P V T N L + G++ + +C V MQ
Sbjct: 423 EAEDLVMEMEKSGVD--PSVETFNT------------LIDAYGRAGQLEKCFTVLSDMQ- 467
Query: 138 QRWYIADTGIYSKLIA------VMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
D GI S +I+ K G+ A+ + +M + P+ VYN++I A++
Sbjct: 468 ------DKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYI 521
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
+ +A +KMK +I TYN+LL+ + +D+ L L L
Sbjct: 522 ESGGTEQAFL----LVEKMKS-SGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGL 576
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
PD+ +YN ++ A G +L M +P + T++ L+ + G ME
Sbjct: 577 RPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMEC 636
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGK 337
+++ ++H +P+ + + N K
Sbjct: 637 LYQHMVHKNVEPSSSIYGTRCENESK 662
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 89/245 (36%), Gaps = 33/245 (13%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P++ + N+LL + V A F L + PD + +N + A G + E ++
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L RM ++ P P ++N +I +
Sbjct: 181 LRRMGRSEGAP---------------------------------PPDAFSYNVVIAGLWR 207
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
+ A VF +M P+ ITY +I + ++ + D++ + G+ V T
Sbjct: 208 SGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVT 267
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
N +L C G E L + + + PD TY +L+ T+ + L
Sbjct: 268 YNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESL 327
Query: 458 QNGIV 462
+ G++
Sbjct: 328 KKGVI 332
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 152/338 (44%), Gaps = 10/338 (2%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E++ M + + DT YS LIA GK G+ A+ LF EM+ +G P +Y ++
Sbjct: 215 ELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGI 274
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ K + KALG Q+MK + C + TY L++ +A V++ ++F + +
Sbjct: 275 YF----KLGRVEKALGLVQEMKE-KGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKE 329
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
PD+ N +++ GK G + + + M+S QC P+++T+N +I + + +A +
Sbjct: 330 GCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKA--RA 387
Query: 310 EQVFKSLMHSKEKPTLP---TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ F KE +P T++ +I + K KA + ++M + P Y +
Sbjct: 388 SEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSL 447
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I G A E+F EL + M++ G +EA LF +G
Sbjct: 448 INALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGC 507
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
PD Y L + M + LL+ ME+NG P+
Sbjct: 508 NPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPD 545
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 182/408 (44%), Gaps = 34/408 (8%)
Query: 81 ELVRVLM-RSFSDKEPLVRTLN-----------------KYVKVVRSEHCFLLFEELGKS 122
E+ R+ M + F P VRTL+ K ++V++ + L E+ K
Sbjct: 41 EIQRLPMNQKFPRNNPSVRTLDERFIRILKIFKWGPDAEKALEVLKLKVDHRLVREVLKI 100
Query: 123 DKWLQC-LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMW-LFSEMRNSGCRPDP 180
D + ++ F+W K+R + D+ Y LI + + G MW EM S C P
Sbjct: 101 DVEIHVKIQFFKWAGKRRNFEHDSTTYMALIHCLDEAGMLG-EMWKTIQEMVRSTCVIGP 159
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
+ + ++ KAK + KAL F ++KG +CKP TYN ++ Q + ++V+
Sbjct: 160 ADLSEIV----KVLGKAKMVNKALSIFYQIKG-RKCKPTSNTYNSMILMLMQEGHHEKVH 214
Query: 241 ALFKEL-HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
L+ E+ +E PD TY+ ++ A+GK G S+ MK N P + ++
Sbjct: 215 ELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGI 274
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKP---TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
Y K ++E+ + KEK T+ T+ +I GKA +A +F M
Sbjct: 275 YFK---LGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGC 331
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA-YCMNGLPTEAD 415
P + +I + G ++ A ++F+E+ L V T N +++A + +EA
Sbjct: 332 KPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAF 391
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
L +E GV P S TY +L + K N E LL+ M++ G P
Sbjct: 392 LWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAP 439
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 144/314 (45%), Gaps = 9/314 (2%)
Query: 149 SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQ 208
S+++ V+GK A+ +F +++ C+P + YN++I + K +
Sbjct: 163 SEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHE----LYN 218
Query: 209 KMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
+M C P+ VTY+ L+ A + D +LF E+ E+ L P Y ++ Y K
Sbjct: 219 EMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKL 278
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
G +++ ++ MK C + T+ LI GK ++ +F +++ KP +
Sbjct: 279 GRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLI 338
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
N++I GKA A +F++M +++ TP+ +TY +I ++ +RA E F K
Sbjct: 339 NNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIK--ALFESKARASEAFLWYEK 396
Query: 389 LGKDMKVS---TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ ++ V T + +++ +C +A LL E G P + Y L A KA
Sbjct: 397 MKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKR 456
Query: 446 KELVQKLLKRMEQN 459
E +L + + +N
Sbjct: 457 YEAANELFQELREN 470
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 117/248 (47%), Gaps = 9/248 (3%)
Query: 130 EVFRWMQK--QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
E F W +K + + + YS LI K + A+ L EM G P P+ Y +LI
Sbjct: 389 EAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLI 448
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCK-PNIVTYNILLRACAQARNVDQVNALFKEL 246
A KAK A FQ+++ E C + Y ++++ + + + LF E+
Sbjct: 449 NA----LGKAKRYEAANELFQELR--ENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEM 502
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
+ PD+Y YN +M + GM E S+L M+ N C PD+ + N++++ + +
Sbjct: 503 KKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGP 562
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
++F + +SK KP + ++N+++ +A + +A + ++M + + ITY I
Sbjct: 563 KGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSI 622
Query: 367 ITMYGYCD 374
+ G D
Sbjct: 623 LEAVGKID 630
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 139/327 (42%), Gaps = 44/327 (13%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + +GK+ K + +F M K+ D + + LI ++GK G+ A+ LF EM +
Sbjct: 306 LIKGVGKAGKVEEAYSIFMNMLKEGCK-PDVVLINNLINLLGKAGRLADAIKLFEEMESL 364
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNI--------- 225
C P+ YN +I A ++ +A ++A +++KMK P+ TY+I
Sbjct: 365 QCTPNVVTYNTVIKALFESKARA---SEAFLWYEKMKE-NGVVPSSFTYSILIDGFCKTN 420
Query: 226 --------------------------LLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L+ A +A+ + N LF+EL E+ Y
Sbjct: 421 RVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYA 480
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
++ GK G + E + + MK C PD+ +N L+ + D+ + +++ +
Sbjct: 481 VMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEEN 540
Query: 320 KEKPTLPTFNSMIINYGKARLQGK--AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
P L + N II G AR G A +F +M K P ++Y ++
Sbjct: 541 GCTPDLNSHN--IILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFE 598
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEA 404
A ++ E++ G + + T +++LEA
Sbjct: 599 EAAKLMKEMNSKGFEYDLITYSSILEA 625
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 100/244 (40%), Gaps = 1/244 (0%)
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
TY L+ +A + ++ +E+ S + ++ GK M+ + S+ ++
Sbjct: 126 TYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQI 185
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-KPTLPTFNSMIINYGKARL 340
K +CKP T+N +I + +K+ +++ + + + P T++++I +GK
Sbjct: 186 KGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGR 245
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
A +F +M P+ Y I+ +Y V +A + E+ + G + V T
Sbjct: 246 DDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTE 305
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+++ G EA +F N G PD L KA KL + ME
Sbjct: 306 LIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQ 365
Query: 461 IVPN 464
PN
Sbjct: 366 CTPN 369
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 81/212 (38%), Gaps = 1/212 (0%)
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
D TY ++ + GM+ EM + M + C + ++ GK + +K +F
Sbjct: 123 DSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIF 182
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM-TAMKYTPSFITYECIITMYGY 372
+ K KPT T+NSMI+ + K ++ +M P +TY +I +G
Sbjct: 183 YQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGK 242
Query: 373 CDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
A +FDE+ + G +L Y G +A L + G T
Sbjct: 243 LGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYT 302
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y L K KA E + M + G P+
Sbjct: 303 YTELIKGVGKAGKVEEAYSIFMNMLKEGCKPD 334
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 152/338 (44%), Gaps = 10/338 (2%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E++ M + + DT YS LIA GK G+ A+ LF EM+ +G P +Y ++
Sbjct: 215 ELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGI 274
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ K + KALG Q+MK + C + TY L++ +A V++ ++F + +
Sbjct: 275 YF----KLGRVEKALGLVQEMKE-KGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKE 329
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
PD+ N +++ GK G + + + M+S QC P+++T+N +I + + +A +
Sbjct: 330 GCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKA--RA 387
Query: 310 EQVFKSLMHSKEKPTLP---TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ F KE +P T++ +I + K KA + ++M + P Y +
Sbjct: 388 SEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSL 447
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I G A E+F EL + M++ G +EA LF +G
Sbjct: 448 INALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGC 507
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
PD Y L + M + LL+ ME+NG P+
Sbjct: 508 NPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPD 545
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 182/408 (44%), Gaps = 34/408 (8%)
Query: 81 ELVRVLM-RSFSDKEPLVRTLN-----------------KYVKVVRSEHCFLLFEELGKS 122
E+ R+ M + F P VRTL+ K ++V++ + L E+ K
Sbjct: 41 EIQRLPMNQKFPRNNPSVRTLDERFIRILKIFKWGPDAEKALEVLKLKVDHRLVREVLKI 100
Query: 123 DKWLQC-LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMW-LFSEMRNSGCRPDP 180
D + ++ F+W K+R + D+ Y LI + + G MW EM S C P
Sbjct: 101 DVEIHVKIQFFKWAGKRRNFEHDSTTYMALIHCLDEAGMLG-EMWKTIQEMVRSTCVIGP 159
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
+ + ++ KAK + KAL F ++KG +CKP TYN ++ Q + ++V+
Sbjct: 160 ADLSEIV----KVLGKAKMVNKALSIFYQIKG-RKCKPTSNTYNSMILMLMQEGHHEKVH 214
Query: 241 ALFKEL-HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
L+ E+ +E PD TY+ ++ A+GK G S+ MK N P + ++
Sbjct: 215 ELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGI 274
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKP---TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
Y K ++E+ + KEK T+ T+ +I GKA +A +F M
Sbjct: 275 YFK---LGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGC 331
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA-YCMNGLPTEAD 415
P + +I + G ++ A ++F+E+ L V T N +++A + +EA
Sbjct: 332 KPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAF 391
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
L +E GV P S TY +L + K N E LL+ M++ G P
Sbjct: 392 LWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAP 439
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 144/314 (45%), Gaps = 9/314 (2%)
Query: 149 SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQ 208
S+++ V+GK A+ +F +++ C+P + YN++I + K +
Sbjct: 163 SEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHE----LYN 218
Query: 209 KMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
+M C P+ VTY+ L+ A + D +LF E+ E+ L P Y ++ Y K
Sbjct: 219 EMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKL 278
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
G +++ ++ MK C + T+ LI GK ++ +F +++ KP +
Sbjct: 279 GRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLI 338
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
N++I GKA A +F++M +++ TP+ +TY +I ++ +RA E F K
Sbjct: 339 NNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIK--ALFESKARASEAFLWYEK 396
Query: 389 LGKDMKVS---TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ ++ V T + +++ +C +A LL E G P + Y L A KA
Sbjct: 397 MKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKR 456
Query: 446 KELVQKLLKRMEQN 459
E +L + + +N
Sbjct: 457 YEAANELFQELREN 470
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 117/248 (47%), Gaps = 9/248 (3%)
Query: 130 EVFRWMQK--QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
E F W +K + + + YS LI K + A+ L EM G P P+ Y +LI
Sbjct: 389 EAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLI 448
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCK-PNIVTYNILLRACAQARNVDQVNALFKEL 246
A KAK A FQ+++ E C + Y ++++ + + + LF E+
Sbjct: 449 NA----LGKAKRYEAANELFQELR--ENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEM 502
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
+ PD+Y YN +M + GM E S+L M+ N C PD+ + N++++ + +
Sbjct: 503 KKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGP 562
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
++F + +SK KP + ++N+++ +A + +A + ++M + + ITY I
Sbjct: 563 KGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSI 622
Query: 367 ITMYGYCD 374
+ G D
Sbjct: 623 LEAVGKID 630
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 139/327 (42%), Gaps = 44/327 (13%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + +GK+ K + +F M K+ D + + LI ++GK G+ A+ LF EM +
Sbjct: 306 LIKGVGKAGKVEEAYSIFMNMLKEGCK-PDVVLINNLINLLGKAGRLADAIKLFEEMESL 364
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNI--------- 225
C P+ YN +I A ++ +A ++A +++KMK P+ TY+I
Sbjct: 365 QCTPNVVTYNTVIKALFESKARA---SEAFLWYEKMKE-NGVVPSSFTYSILIDGFCKTN 420
Query: 226 --------------------------LLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L+ A +A+ + N LF+EL E+ Y
Sbjct: 421 RVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYA 480
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
++ GK G + E + + MK C PD+ +N L+ + D+ + +++ +
Sbjct: 481 VMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEEN 540
Query: 320 KEKPTLPTFNSMIINYGKARLQGK--AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
P L + N II G AR G A +F +M K P ++Y ++
Sbjct: 541 GCTPDLNSHN--IILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFE 598
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEA 404
A ++ E++ G + + T +++LEA
Sbjct: 599 EAAKLMKEMNSKGFEYDLITYSSILEA 625
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 100/244 (40%), Gaps = 1/244 (0%)
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
TY L+ +A + ++ +E+ S + ++ GK M+ + S+ ++
Sbjct: 126 TYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQI 185
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-KPTLPTFNSMIINYGKARL 340
K +CKP T+N +I + +K+ +++ + + + P T++++I +GK
Sbjct: 186 KGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGR 245
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
A +F +M P+ Y I+ +Y V +A + E+ + G + V T
Sbjct: 246 DDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTE 305
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+++ G EA +F N G PD L KA KL + ME
Sbjct: 306 LIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQ 365
Query: 461 IVPN 464
PN
Sbjct: 366 CTPN 369
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 81/212 (38%), Gaps = 1/212 (0%)
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
D TY ++ + GM+ EM + M + C + ++ GK + +K +F
Sbjct: 123 DSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIF 182
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM-TAMKYTPSFITYECIITMYGY 372
+ K KPT T+NSMI+ + K ++ +M P +TY +I +G
Sbjct: 183 YQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGK 242
Query: 373 CDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
A +FDE+ + G +L Y G +A L + G T
Sbjct: 243 LGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYT 302
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y L K KA E + M + G P+
Sbjct: 303 YTELIKGVGKAGKVEEAYSIFMNMLKEGCKPD 334
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 159/353 (45%), Gaps = 11/353 (3%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+ ++ D Y+ ++ + K G+ A+ LF+EM GC P+ +N +I L + K
Sbjct: 108 EDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILG-LCQQSK- 165
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+ +A F +M+ + P+ +Y IL+ A+A +++ LF+ + +S + P T
Sbjct: 166 --IDQACQVFHEMEARD-IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVT 222
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN V+ + E + M+S C+P TFN+LID++ KR D+ ++ K +
Sbjct: 223 YNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMT 282
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DN 375
P + T++++I A ++ + M + P+ +T +I +G C
Sbjct: 283 DDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLI--HGLCKAGR 340
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+ ARE+ D + G+ V T N ++ +C G A L + G+ P+ TY
Sbjct: 341 IKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTA 400
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAK 488
L KAN + +M+ +G PN + + F S AG G K
Sbjct: 401 LVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCS--AGQVDGGLK 451
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 160/382 (41%), Gaps = 33/382 (8%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K+ K ++F+ + T Y+ LI + A LF++M
Sbjct: 15 ILIDGLAKAGKLNDARDLFQKLL-HSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNR 73
Query: 174 SGCRPDPSVYNALITAHL-------------------HTRD------------KAKALAK 202
GC P P YN +I A H D K+ + +
Sbjct: 74 RGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEE 133
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
AL F +M+ + C PN ++N ++ Q +DQ +F E+ + PD ++Y ++
Sbjct: 134 ALLLFNEMERLG-CTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILI 192
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D K G + E + RM + P +T+N++I D+ ++FKS+ +
Sbjct: 193 DGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCR 252
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P+ TFN +I + K +A + ++MT + P +TY +I+ V AR +
Sbjct: 253 PSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHL 312
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+++ K V T N ++ C G EA + + + G +PD TY L + +
Sbjct: 313 LEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCR 372
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
A E ++LL M G+ PN
Sbjct: 373 AGQTERARELLSDMVARGLAPN 394
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 161/365 (44%), Gaps = 13/365 (3%)
Query: 90 FSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYS 149
F++ E L T N+ RS + +L L + K Q +VF M+ R D+ Y
Sbjct: 138 FNEMERLGCTPNR-----RSHNTIIL--GLCQQSKIDQACQVFHEMEA-RDIPPDSWSYG 189
Query: 150 KLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQK 209
LI + K G+ A LF M +SG P YN +I H A L +AL F+
Sbjct: 190 ILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVI----HGMCLAYTLDEALELFKS 245
Query: 210 MKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG 269
M+ + C+P+ T+NIL+ A + +D+ L K + + PD+ TY+ ++
Sbjct: 246 MRS-KGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIA 304
Query: 270 MIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFN 329
+ + +L M QCKP ++T N LI K + +V +++ S + P + T+N
Sbjct: 305 RVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYN 364
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
+++ + +A +A + M A P+ +TY +++ + + A +F ++
Sbjct: 365 TLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSS 424
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
G + T A++ +C G LF G++PD Y L K+
Sbjct: 425 GCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARA 484
Query: 450 QKLLK 454
++L+
Sbjct: 485 LEILR 489
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 145/324 (44%), Gaps = 13/324 (4%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+R D+ Y LI + K G+ A LF ++ +SG P Y +LI H A
Sbjct: 3 ERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLI----HGLCMA 58
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+ A F M C P+ VTYN+++ A + +++ L K++ E PD+ T
Sbjct: 59 NSFDDARELFADMN-RRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVT 117
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN VMD K+G ++E + + M+ C P+ + N +I ++ D+ QVF +
Sbjct: 118 YNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEME 177
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DN 375
P ++ +I KA +A +F++M TPS +TY +I +G C
Sbjct: 178 ARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVI--HGMCLAYT 235
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+ A E+F + G T N +++A+C G EA L + + G PD TY
Sbjct: 236 LDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYST 295
Query: 436 LYKAYTKA----NMKELVQKLLKR 455
L + + L++ ++KR
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKR 319
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 138/318 (43%), Gaps = 13/318 (4%)
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
PD Y LI KA L A FQK+ P+ V Y L+ A + D
Sbjct: 8 PDSWSYGILIDGLA----KAGKLNDARDLFQKLL-HSGVTPSTVAYTSLIHGLCMANSFD 62
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
LF +++ P TYN ++DA K GM++E ++ +M + PD++T+N ++
Sbjct: 63 DARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVM 122
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
D K ++ +F + P + N++I+ + +A VF +M A
Sbjct: 123 DGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIP 182
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P +Y +I ++ A ++F + G T N ++ C+ EA L
Sbjct: 183 PDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALEL 242
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
F++ + G P T+ +L A+ K + +LLKRM +G VP+ + T+S+
Sbjct: 243 FKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPD-------VVTYST 295
Query: 478 SLAGSQSGSAKTDLTRSL 495
++G S A+ D R L
Sbjct: 296 LISGLCS-IARVDDARHL 312
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 123/308 (39%), Gaps = 43/308 (13%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI------YSKLIAVMGKKGQTRLAMWL 167
+L + L K+ K + ++FR M D+GI Y+ +I M A+ L
Sbjct: 190 ILIDGLAKAGKLNEAYKLFRRM-------LDSGITPSAVTYNVVIHGMCLAYTLDEALEL 242
Query: 168 FSEMRNSGCRPDPSVYNALITAHLH--TRDKAKALAK----------ALGYFQKMKGM-- 213
F MR+ GCRP +N LI AH D+A L K + Y + G+
Sbjct: 243 FKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCS 302
Query: 214 ----------------ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+CKP +VT N L+ +A + + + + S +PD+ T
Sbjct: 303 IARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVT 362
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN ++ + + G + +LS M + P+++T+ L+ K + VF +
Sbjct: 363 YNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMK 422
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
S P L T+ ++I+ + A +F +M +P + Y + +
Sbjct: 423 SSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSA 482
Query: 378 RAREIFDE 385
RA EI E
Sbjct: 483 RALEILRE 490
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 158/351 (45%), Gaps = 23/351 (6%)
Query: 132 FRWMQKQRWYIADTGI----------YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
FR K+ Y D + Y LI + K G+T+ L ++ +PD
Sbjct: 145 FRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVV 204
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQV 239
+YN +I H+ K K L A + +M KG+ PN+VTYN L+ ++ +
Sbjct: 205 MYNTII----HSLCKNKLLGDACDLYSEMIVKGIS---PNVVTYNALVYGFCIMGHLKEA 257
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
+L E+ + PD+ T+N ++DA GK G +K + VL+ M KPD++T+N LID
Sbjct: 258 FSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDG 317
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
Y + VF S+ S P + T+ +MI K ++ +A +F++M P
Sbjct: 318 YFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPD 377
Query: 360 FITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
+TY +I G C N + RA + ++ + G V + +L+A C G A
Sbjct: 378 IVTYTSLID--GLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEF 435
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
F+ G + TY ++ KA++ L +ME G +P+ F
Sbjct: 436 FQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITF 486
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 136/318 (42%), Gaps = 5/318 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +Y+ +I + K A L+SEM G P+ YNAL+ L +A
Sbjct: 202 DVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFC----IMGHLKEA 257
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+MK ++ P++ T+N L+ A + + + + ++ + PD+ TYN ++D
Sbjct: 258 FSLLNEMK-LKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLID 316
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
Y +K + V M + P++ T+ +ID K + D+ +F+ + + P
Sbjct: 317 GYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIP 376
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T+ S+I K +A + +KM P +Y ++ + A+E F
Sbjct: 377 DIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFF 436
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
L G + V T N M+ C L EA L G PD+ T+K + A +
Sbjct: 437 QRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEK 496
Query: 444 NMKELVQKLLKRMEQNGI 461
+ + +K+L+ M G+
Sbjct: 497 DENDKAEKILREMIARGL 514
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 127/305 (41%), Gaps = 11/305 (3%)
Query: 163 LAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVT 222
A + + + G P+ N LI + KAL YF + + N V+
Sbjct: 116 FAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKAL-----YFHDQVVAQGFQLNQVS 170
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y L+ + V L ++L + PD+ YN ++ + KN ++ + + S M
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMI 230
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK---PTLPTFNSMIINYGKAR 339
P+++T+N L+ + +++ F L K K P + TFN++I GK
Sbjct: 231 VKGISPNVVTYNALVYGFC---IMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEG 287
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLN 399
A+ V M P +TY +I Y + + V A+ +F +++ G V T
Sbjct: 288 KMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYT 347
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
M++ C + EA LFE + PD TY L K + E L K+M++
Sbjct: 348 TMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQ 407
Query: 460 GIVPN 464
GI P+
Sbjct: 408 GIQPD 412
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 148/353 (41%), Gaps = 26/353 (7%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K + E F+ + + +++ + Y+ +I + K AM L S+M
Sbjct: 418 ILLDALCKGGRLENAKEFFQRLLVKGYHL-NVQTYNVMINGLCKADLFGEAMDLKSKMEG 476
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
GC PD + +I A L +D E K + ++ R +A
Sbjct: 477 KGCMPDAITFKTIICA-LFEKD------------------ENDKAEKILREMIARGLQEA 517
Query: 234 RNV--DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
R V + + + ++ + PD+ TY +MD Y +K + V M P++
Sbjct: 518 RKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQ 577
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
+ ++ID K++ D+ +F+ + H P + T+ S+I K +A + ++M
Sbjct: 578 CYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEM 637
Query: 352 TAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
P +Y I + G C + + A+EIF L G + V AM+ C G
Sbjct: 638 KEHGIQPDVYSYT--ILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAG 695
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
L EA L + G PD+ T+ ++ A + + + +K+L M G++
Sbjct: 696 LFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGLM 748
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 148/379 (39%), Gaps = 33/379 (8%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ + L K + + +F M K + I D Y+ LI + K A+ L +M+
Sbjct: 349 MIDGLCKEKMVDEAMSLFEEM-KYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQ 407
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQ 232
G +PD Y L+ A K L A +FQ++ KG N+ TYN+++ +
Sbjct: 408 GIQPDVYSYTILLDALC----KGGRLENAKEFFQRLLVKGYHL---NVQTYNVMINGLCK 460
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAY-----------------------GKNG 269
A + L ++ PD T+ ++ A +
Sbjct: 461 ADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKV 520
Query: 270 MIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFN 329
+KE + VL+ M KPD++T+ L+D Y + VF S+ P + +
Sbjct: 521 RLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYT 580
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
MI K + +A +F++M P+ +TY +I ++ RA + E+ +
Sbjct: 581 IMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEH 640
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
G V + +L+ C +G A +F+ G + Y + KA + +
Sbjct: 641 GIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEA 700
Query: 450 QKLLKRMEQNGIVPNKRFF 468
L +ME G +P+ F
Sbjct: 701 LDLQXKMEDKGCMPDAVTF 719
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 131/326 (40%), Gaps = 45/326 (13%)
Query: 183 YNALITAHLHTRDKAK-----ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
Y + TA LH + ++ A+ F +M M R P +N +L + ++
Sbjct: 22 YPPIATATLHYQSHSQPHYHHHHHHAVASFDRMLLM-RPPPPTFHFNYILSSLVNNKHYP 80
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
V +LFK+ + PD+ T N +M+ + I SVL+ + P+ IT N LI
Sbjct: 81 TVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLI 140
Query: 298 DSYGKR---------------QAFDKMEQVFKSLMHS--------------------KEK 322
R Q F + +++L++ K
Sbjct: 141 KGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVK 200
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAR 380
P + +N++I + K +L G A ++ +M +P+ +TY ++ YG+C ++ A
Sbjct: 201 PDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALV--YGFCIMGHLKEAF 258
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ +E+ + V T N +++A G A ++ + PD TY L Y
Sbjct: 259 SLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGY 318
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKR 466
N + + + M Q+G+ PN R
Sbjct: 319 FFLNKVKNAKYVFYSMAQSGVTPNVR 344
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 165/375 (44%), Gaps = 41/375 (10%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
Q L + Q +++ D Y LI + K G+ A+ L + +P+ +YN +
Sbjct: 149 QALHFHDKVVAQGFHL-DQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMI 207
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I KAK + A + +M C P++ TYN L+ + ++ LF ++
Sbjct: 208 ID----NMCKAKLVNDAFDLYSQMVAKRIC-PDVFTYNALISGFSAVSKLNYAIDLFNKM 262
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
+ + P++YT+N ++D + K G + + + VL+ M + KPD++T+N L+D Y
Sbjct: 263 KKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKV 322
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+K + +F S+ + + +M+ + K ++ +A +F++M K P+ +TY +
Sbjct: 323 NKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSL 382
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I + A ++ DE+ G+ + T +++L+A C N +A L N + G+
Sbjct: 383 IDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGI 442
Query: 427 TPDSSTYKLLYKAYTKANMKELVQK----------------------------------- 451
PD TY +L K ++ E Q
Sbjct: 443 RPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALA 502
Query: 452 LLKRMEQNGIVPNKR 466
LL +ME NG +PN +
Sbjct: 503 LLSKMEDNGCIPNAK 517
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 151/359 (42%), Gaps = 56/359 (15%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ +I M K A L+S+M PD YNALI+ L A+
Sbjct: 203 MYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGF----SAVSKLNYAIDL 258
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F KMK E PN+ T+NIL+ + V+ + + + + PD+ TYN +MD Y
Sbjct: 259 FNKMKK-ENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYC 317
Query: 267 K------------------------------NG-----MIKEMESVLSRMKSNQCKPDII 291
NG M+ E ++ M+ + P+++
Sbjct: 318 SINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVV 377
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSL-----MHSK-EKPTLPTFNSMIINYGKARLQGKAE 345
T++ LID K+ ++F +L MH + + P + T++S++ K KA
Sbjct: 378 TYSSLID------GLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAI 431
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLE 403
+ + P TY +I G C + + A+ +F++L G ++ V M++
Sbjct: 432 ALLTNLKDQGIRPDMYTYTILIK--GLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQ 489
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+C G +A L + G P++ TY+L+ + + + + +KLL+ M G++
Sbjct: 490 GFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGLL 548
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 134/329 (40%), Gaps = 19/329 (5%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA-----HLHTRDKA 197
+D ++ LI + G L+ +F+++ G P +N LI H+H
Sbjct: 94 SDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIH----- 148
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+AL + K+ + + V+Y L+ + + L K + ++ P+
Sbjct: 149 ----QALHFHDKVVA-QGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVM 203
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN ++D K ++ + + S+M + + PD+ T+N LI + + +F +
Sbjct: 204 YNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMK 263
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DN 375
P + TFN ++ + K A+ V M P +TY + M GYC +
Sbjct: 264 KENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSL--MDGYCSINK 321
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
V++A++IFD ++ G V M+ +C + EA LFE + P+ TY
Sbjct: 322 VNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSS 381
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L K KL+ M G PN
Sbjct: 382 LIDGLCKLGRIFYALKLVDEMHDRGQPPN 410
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 119/280 (42%), Gaps = 1/280 (0%)
Query: 196 KAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
KAK + AL Q+M+ + + + T+NIL+ +Q ++F ++ + P
Sbjct: 73 KAKHHSTALSLHQQME-LNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTA 131
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
T+N ++ G I + ++ + D +++ LI+ K Q+ K
Sbjct: 132 ITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKR 191
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
+ +P +N +I N KA+L A ++ +M A + P TY +I+ +
Sbjct: 192 VDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSK 251
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
++ A ++F+++ K + V T N +++ +C G +A ++ + PD TY
Sbjct: 252 LNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNS 311
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
L Y N + + M G++ N + + + F
Sbjct: 312 LMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGF 351
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 97/193 (50%), Gaps = 10/193 (5%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ + +F M + R I + YS LI + K G+ A+ L EM + G P+ Y+++
Sbjct: 359 EAINLFEEM-RCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSI 417
Query: 187 ITAHL--HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
+ A H DKA AL L K +G+ +P++ TY IL++ Q+ ++ +F+
Sbjct: 418 LDALCKNHHVDKAIALLTNL----KDQGI---RPDMYTYTILIKGLCQSGRLEDAQNVFE 470
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
+L D+Y Y ++ + G + ++LS+M+ N C P+ T+ L+I S ++
Sbjct: 471 DLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKD 530
Query: 305 AFDKMEQVFKSLM 317
D E++ + ++
Sbjct: 531 ENDTAEKLLREMI 543
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 96/212 (45%), Gaps = 5/212 (2%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
IA+ IY+ ++ K A+ LF EMR P+ Y++LI K +
Sbjct: 338 IANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLC----KLGRIF 393
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
AL +M + PNIVTY+ +L A + +VD+ AL L + + PD+YTY +
Sbjct: 394 YALKLVDEMHDRGQ-PPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTIL 452
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ ++G +++ ++V + D+ + ++I + + FDK + + +
Sbjct: 453 IKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGC 512
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
P T+ +I++ + AE + ++M
Sbjct: 513 IPNAKTYELVILSLFEKDENDTAEKLLREMIV 544
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 100/246 (40%), Gaps = 10/246 (4%)
Query: 237 DQVNALFKELHESIL----APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
D+ N L + +L P + +N ++ + K S+ +M+ N + D T
Sbjct: 39 DEENNLISSFNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFT 98
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
FN+LI+ + + +F ++ PT TFN++I +A + K+
Sbjct: 99 FNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVV 158
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL-GKDMKVSTL--NAMLEAYCMNG 409
A + ++Y +I G C V R L ++ GK ++ + + N +++ C
Sbjct: 159 AQGFHLDQVSYGTLIN--GLC-KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAK 215
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFL 469
L +A L+ + PD TY L ++ + L +M++ I PN F
Sbjct: 216 LVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFN 275
Query: 470 EALETF 475
++ F
Sbjct: 276 ILVDGF 281
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 167/350 (47%), Gaps = 8/350 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+F ++G+S W + L V M+ + D S +++ ++G R A F+E+++
Sbjct: 254 VFGKMGRS--WRKILGVLDEMRSKGLKF-DEFTCSTVLSACAREGLLREAKEFFAELKSC 310
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P YNAL L KA +AL ++M+ C + VTYN L+ A +A
Sbjct: 311 GYEPGTVTYNAL----LQVFGKAGVYTEALSVLKEME-ENSCPADSVTYNELVAAYVRAG 365
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ + + + + + P+ TY V+DAYGK G E + MK C P+ T+N
Sbjct: 366 FSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYN 425
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++ GK+ ++M ++ + + P T+N+M+ G + VF++M +
Sbjct: 426 AVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSC 485
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ P T+ +I+ YG C + A +++ E+++ G + V+T NA+L A G
Sbjct: 486 GFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSG 545
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ + + + G P ++Y L+ + Y K ++++ R+++ I P+
Sbjct: 546 ENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPS 595
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 162/404 (40%), Gaps = 75/404 (18%)
Query: 135 MQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR 194
M ++ + + Y+ +I GK G+ A+ LF M+ +GC P+ YNA+++ L +
Sbjct: 376 MMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSL-LGKK 434
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
++ + K L MK C PN T+N +L C VN +F+E+ PD
Sbjct: 435 SRSNEMIKMLC---DMKS-NGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPD 490
Query: 255 IYTYNGVMDAYGKNG-------MIKEM----------------------------ESVLS 279
T+N ++ AYG+ G M EM E+V+S
Sbjct: 491 RDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVIS 550
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKME---------QVFKSLMHSKE--------- 321
MKS KP +++L++ Y K + +E Q+F S M +
Sbjct: 551 DMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCR 610
Query: 322 -----------------KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
KP + FNSM+ + + + +AE + + + +P +TY
Sbjct: 611 ALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYN 670
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
++ MY +A EI L K + + N +++ +C GL EA +
Sbjct: 671 SLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTER 730
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G+ P TY YT M ++ +++ M +N PN+ F
Sbjct: 731 GIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTF 774
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 170/392 (43%), Gaps = 15/392 (3%)
Query: 85 VLMRSFSDKEPLVRTLNKYVKVVRSE----HCFLLFEELGKSDKWLQCLEVFRWMQKQRW 140
VL+ S + +PL L+++ V+SE L + L S W + + +F W+
Sbjct: 110 VLVNSIVE-QPLT-GLSRFFDSVKSELLRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSN 167
Query: 141 YIA---DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
A D + + ++G++ Q +A L ++ D Y T LH +
Sbjct: 168 SGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAY----TTILHAYSRT 223
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ-ARNVDQVNALFKELHESILAPDIY 256
KA+ F++MK M P +VTYN++L + R+ ++ + E+ L D +
Sbjct: 224 GKYEKAIDLFERMKEMGP-SPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEF 282
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
T + V+ A + G+++E + + +KS +P +T+N L+ +GK + + V K +
Sbjct: 283 TCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEM 342
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+ T+N ++ Y +A +A V + MT P+ ITY +I YG
Sbjct: 343 EENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKE 402
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
A ++F + + G T NA+L E + + + G +P+ +T+ +
Sbjct: 403 DEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTM 462
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
M + V ++ + M+ G P++ F
Sbjct: 463 LALCGNKGMDKFVNRVFREMKSCGFEPDRDTF 494
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 138/334 (41%), Gaps = 44/334 (13%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ ++A+ G KG + +F EM++ G PD +N LI+A+ + A +K G
Sbjct: 459 WNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDA-SKMYGEM 517
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ G C + TYN LL A A+ + + ++ P +Y+ ++ Y K
Sbjct: 518 TR-AGFNAC---VTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAK 573
Query: 268 NGMIKEMESVLSRMKSNQC-----------------------------------KPDIIT 292
G +E + +R+K Q KPD++
Sbjct: 574 GGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVI 633
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
FN ++ + + +D+ E + +S+ P L T+NS++ Y + KAE + + +
Sbjct: 634 FNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLE 693
Query: 353 AMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
+ P ++Y +I G+C + A + E+++ G + T N + Y G+
Sbjct: 694 KSQLKPDLVSYNTVIK--GFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGM 751
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E + + E P+ T+K++ Y +A
Sbjct: 752 FAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAG 785
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 124/276 (44%), Gaps = 23/276 (8%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + +KG R + S+M++ G +P + Y+ ++ + AK Y
Sbjct: 529 YNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCY----------AKGGNYL 578
Query: 208 QKMKGMERCK---------PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
G+ER + P+ + LL A + R + F + PD+ +
Sbjct: 579 ----GIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIF 634
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N ++ + +N M + E +L ++ + PD++T+N L+D Y +R K E++ K+L
Sbjct: 635 NSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEK 694
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
S+ KP L ++N++I + + L +A + +MT P TY ++ Y +
Sbjct: 695 SQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAE 754
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
++ + ++K T +++ YC G +EA
Sbjct: 755 IEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 790
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 169/385 (43%), Gaps = 40/385 (10%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L +K + +F+ + +++ + +Y ++ + K+G T + L M
Sbjct: 138 LLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQG 197
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
+PD Y+ +I A K L A+ +MK + PNI TYN L+ +
Sbjct: 198 NTKPDVRTYSIVIDALC----KDINLDAAINLLNEMK-QKNIPPNIFTYNSLIDGLCKLG 252
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
++V L E+ + P+++T++ ++D K G +++ + V+ M +PDIIT++
Sbjct: 253 QWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYS 312
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++D Y R D+ +VF L KP + +++ +I Y K + KA +F +++
Sbjct: 313 AIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQK 372
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG------------------------ 390
P +TY I+ + A++IFDE+ ++G
Sbjct: 373 GLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEA 432
Query: 391 -----------KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+D +S ++ C N EA +FE ++G+ PD TY ++
Sbjct: 433 MLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITG 492
Query: 440 YTKANMKELVQKLLKRMEQNGIVPN 464
+ + + + V+ +L++ME NG N
Sbjct: 493 FCREGLFDEVKGILRKMEDNGCPAN 517
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 153/315 (48%), Gaps = 10/315 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEM-RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
++ L+ + + + A+ LF ++ R C P+ +Y ++ L R + K L
Sbjct: 135 FNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNG-LSKRGHTE---KTLSL 190
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+ M+ KP++ TY+I++ A + N+D L E+ + + P+I+TYN ++D
Sbjct: 191 LRIME-QGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLC 249
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K G ++++++LS M + P++ TF++LID K + ++V + ++ +P +
Sbjct: 250 KLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDII 309
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFD 384
T+++++ Y +A VF + P+ +Y +I GYC N+++A ++F
Sbjct: 310 TYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILIN--GYCKKKNLAKAMQLFG 367
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E+S+ G T + +L G +A +F+ +G TPD + L Y K
Sbjct: 368 EISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYG 427
Query: 445 MKELVQKLLKRMEQN 459
+ E L ++E+N
Sbjct: 428 LVEEAMLLFSKLERN 442
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 158/377 (41%), Gaps = 26/377 (6%)
Query: 123 DKWLQCLE----VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
DK + CL+ +F M + + + +SKL M + LF EMR G
Sbjct: 37 DKEVSCLDDAVSLFHRMVRMKP-LPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPI 95
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
S+ N ++T R + L + K G+ N+VT+N LL V
Sbjct: 96 SDSILN-IVTNSYCLRHRIDCAFSVLPIYLK-TGIPF---NVVTFNTLLGGLFAENKVTD 150
Query: 239 VNALFKEL-HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
LFK+L E I P+ Y VM+ K G ++ S+L M+ KPD+ T++++I
Sbjct: 151 AVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVI 210
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
D+ K D + + P + T+NS+I K K + + +M +
Sbjct: 211 DALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNIN 270
Query: 358 PSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
P+ T+ +I G C V A E+ + + G + + T +A+++ YC+ G A
Sbjct: 271 PNVHTFSILID--GLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRAR 328
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+F + G+ P+ +Y +L Y K +L + Q G+ P+ T+
Sbjct: 329 RVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDT-------VTY 381
Query: 476 SSSLAG----SQSGSAK 488
S+ L G + G AK
Sbjct: 382 STILHGLIEVGRIGDAK 398
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 171/395 (43%), Gaps = 27/395 (6%)
Query: 68 SKRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQ 127
SKRG + L L+R++ + + +P VRT + ++ + L K
Sbjct: 179 SKRGHTEKTLS---LLRIMEQG--NTKPDVRTYS------------IVIDALCKDINLDA 221
Query: 128 CLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
+ + M KQ+ + Y+ LI + K GQ L SEM N P+ ++ LI
Sbjct: 222 AINLLNEM-KQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILI 280
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
L K + + + + + KG+E P+I+TY+ ++ VD+ +F L
Sbjct: 281 DG-LCKEGKVEDADEVMRHMIE-KGVE---PDIITYSAIMDGYCLRGQVDRARRVFNVLR 335
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
+ + P+I++Y+ +++ Y K + + + + KPD +T++ ++ +
Sbjct: 336 DKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIG 395
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
+++F ++ P + ++++ Y K L +A +F K+ + + Y +I
Sbjct: 396 DAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVI 455
Query: 368 TMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
G C D V A IF++L +G V T N M+ +C GL E + + G
Sbjct: 456 N--GLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNG 513
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
++ TY ++ + + ++N + +K M G
Sbjct: 514 CPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRG 548
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 143/314 (45%), Gaps = 13/314 (4%)
Query: 111 HCF-LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFS 169
H F +L + L K K EV R M ++ D YS ++ +GQ A +F+
Sbjct: 274 HTFSILIDGLCKEGKVEDADEVMRHMI-EKGVEPDIITYSAIMDGYCLRGQVDRARRVFN 332
Query: 170 EMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILL 227
+R+ G +P+ Y+ LI + K K LAKA+ F ++ KG+ KP+ VTY+ +L
Sbjct: 333 VLRDKGIKPNIFSYSILINGYC----KKKNLAKAMQLFGEISQKGL---KPDTVTYSTIL 385
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
+ + +F E+ PDI ++ ++ Y K G+++E + S+++ N+
Sbjct: 386 HGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNRED 445
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
+I + ++I+ K + +F+ L P + T+N MI + + L + + +
Sbjct: 446 TNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGI 505
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
+KM + ITY I+ + + +S E++ G +T ++
Sbjct: 506 LRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVLKE 565
Query: 408 NGLPTEADLLFENS 421
N P+ D++ ++S
Sbjct: 566 N--PSIVDMIPDHS 577
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 153/322 (47%), Gaps = 5/322 (1%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
D Y +I + K G T A+ +FSEM +G PD VY++L+ + L +
Sbjct: 1083 GDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLC----RFGRLKE 1138
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
AL +F++M+G ++ TYN L+ ++A +V + + +PD +T+ ++
Sbjct: 1139 ALEFFKEMEG-RGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILI 1197
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D K G + E + +L M+ +PDI+T+N L++ + ++F+SL K
Sbjct: 1198 DGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIK 1257
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
+ ++N +I Y K + +A F++M PS +TY +I V A+++
Sbjct: 1258 LNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKL 1317
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
F E+ G+ +K+ST +L+ C NG EA LF++ P+ + +L +
Sbjct: 1318 FVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCR 1377
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
A E K + +NG+ P+
Sbjct: 1378 AGKLEEAWKQFDEISKNGLEPD 1399
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 124/297 (41%), Gaps = 6/297 (2%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ LF EM G D Y LI KA+ A+ +KMKG CK ++ TY
Sbjct: 1035 AVQLFDEMTKKGLLGDAKTYGILINGLC----KARKTGLAIKLHEKMKG--NCKGDVFTY 1088
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
+++ A + + +F E+ + + PD+ Y+ +MD + G +KE M+
Sbjct: 1089 GMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEG 1148
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
D+ T+N LI + + ++ ++ P TF +I K G+
Sbjct: 1149 RGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGE 1208
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A+ + + M P +TY ++ + A ++F+ L+ G + V + N ++
Sbjct: 1209 AQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILIN 1268
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
YC + EA FE G+ P + TY L A ++ QKL M+ G
Sbjct: 1269 GYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCG 1325
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 150/351 (42%), Gaps = 6/351 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + L + + + LE F+ M+ R AD Y+ LI + + G + W + M +
Sbjct: 1126 LMDGLCRFGRLKEALEFFKEMEG-RGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDR 1184
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G PD + LI ++ A+ + + KG E P+I+TYN L+
Sbjct: 1185 GFSPDAFTFTILIDGL--CKEGKVGEAQQILELMRHKGKE---PDILTYNTLMNGLCLVG 1239
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
++ LF+ L + + ++++YN +++ Y K+ I E M+ KP +T+N
Sbjct: 1240 QLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYN 1299
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
LI + + +++F + + L T+ ++ K +A +FQ +
Sbjct: 1300 TLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKT 1359
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
++ P+ + ++ + A + FDE+SK G + N ++ C G+ +EA
Sbjct: 1360 EHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEA 1419
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
L G PDS T+ ++ + K N +LL+ M P++
Sbjct: 1420 VKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDE 1470
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 121/338 (35%), Gaps = 79/338 (23%)
Query: 204 LGYFQKMKGMER------CKPNIVTYNILLRACAQAR----------------------- 234
LGY+ + M R +P++ T NIL+ C R
Sbjct: 959 LGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVT 1018
Query: 235 ------------NVDQVNALFKELHESILAPDIYTY----NG------------------ 260
+ LF E+ + L D TY NG
Sbjct: 1019 VTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMK 1078
Query: 261 ------------VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
++DA K+GM E + S M PD++ ++ L+D + +
Sbjct: 1079 GNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKE 1138
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+ FK + + T+NS+I +A L + + M ++P T+ +I
Sbjct: 1139 ALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILID 1198
Query: 369 MYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
G C V A++I + + GK+ + T N ++ C+ G +A LFE+ + G+
Sbjct: 1199 --GLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGI 1256
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ +Y +L Y K + + + M G+ P+
Sbjct: 1257 KLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPS 1294
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 96/251 (38%), Gaps = 1/251 (0%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P T+N LL + A+ V +++++++ + PD+YT N ++ + V
Sbjct: 944 PCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGV 1003
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
+PD +T L+ Q+F + T+ +I K
Sbjct: 1004 FGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCK 1063
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
AR G A + +KM F TY II + A ++F E+ G V
Sbjct: 1064 ARKTGLAIKLHEKMKGNCKGDVF-TYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVV 1122
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
+++++ C G EA F+ G++ D TY L ++A + + V L M
Sbjct: 1123 YSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMV 1182
Query: 458 QNGIVPNKRFF 468
G P+ F
Sbjct: 1183 DRGFSPDAFTF 1193
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 9/152 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y L+ + K G AM LF ++ + +P+ V++ L+ +A L +A F
Sbjct: 1333 YCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMC----RAGKLEEAWKQF 1388
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
++ G+E P+ + YNIL+ + + L ++ E PD T+N ++
Sbjct: 1389 DEISKNGLE---PDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNL 1445
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
K I E +L M++ PD ++L+
Sbjct: 1446 LKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 88/230 (38%), Gaps = 38/230 (16%)
Query: 269 GMIKEMESV--LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
G+IK +++ R ++ P TFN L+ S K + + +++ + +P L
Sbjct: 923 GIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLY 982
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T N +I R G VF + P +T ++ + + A ++FDE+
Sbjct: 983 TLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEM 1042
Query: 387 SKLG----------------------------KDMK------VSTLNAMLEAYCMNGLPT 412
+K G + MK V T +++A C +G+ T
Sbjct: 1043 TKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTT 1102
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTK-ANMKELVQKLLKRMEQNGI 461
EA +F G+ PD Y L + +KE ++ K ME GI
Sbjct: 1103 EALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALE-FFKEMEGRGI 1151
>gi|297743170|emb|CBI36037.3| unnamed protein product [Vitis vinifera]
Length = 646
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 165/370 (44%), Gaps = 33/370 (8%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K +K Q VF+ M+++ D Y+ +I + GK G+ ++ LF EM
Sbjct: 265 MLLDALAKDNKVDQVYMVFKDMKRKHCE-PDEYTYTIMIRMTGKIGKADESLTLFQEMTE 323
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKA-----------------------LAKALGYFQKM 210
G P+ YN +I A + R K L + L
Sbjct: 324 KGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVVEVSNKFMNKSIYAYLVRTLSKLGHA 383
Query: 211 KGMERCKPNIVTYNI---------LLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
R N+ +++ +L + A + L ++HE ++ D YN V
Sbjct: 384 SEAHRLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTV 443
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ A GK ++ + +MK + PDI ++N+LI S+G+ ++ ++F+ L +S
Sbjct: 444 LSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSC 503
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
KP + +FNS+I GK +A F++M +P +TY +I +G D V A
Sbjct: 504 KPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACR 563
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+FDE+ G + T N +L+ +G EA L+ G+TPDS TY +L + +
Sbjct: 564 LFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQS 623
Query: 442 KANMKELVQK 451
++ K V++
Sbjct: 624 GSHQKVRVRR 633
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 145/355 (40%), Gaps = 37/355 (10%)
Query: 129 LEVFRWMQKQ-RWYIADTGIYSKLIAVMGKKGQTR------LAMWLFSEMRNSGCRPDPS 181
LE FR+ + ++ Y++L+ ++ K R L + +M G R S
Sbjct: 135 LEFFRFCSSNIPKFQHNSFTYNRLLVILSKPSALRDSERLDLIRAILDDMERCGVRGSIS 194
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERC---------KPNIVTYNILLRACAQ 232
N LI G F +ERC + N TY LL+A +
Sbjct: 195 TINILI-----------------GIFGGGADVERCFDLVKKWDLQMNCYTYKCLLQAHLR 237
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+ N ++ ++ EL DI+ YN ++DA K+ + ++ V MK C+PD T
Sbjct: 238 SNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYT 297
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+ ++I GK D+ +F+ + P L +N+MI R+ K ++F KM
Sbjct: 298 YTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKM- 356
Query: 353 AMKYTPSFIT---YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
++ + F+ Y ++ + S A +F + + +MLE+ C G
Sbjct: 357 VVEVSNKFMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYMSMLESLCDAG 416
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
TEA L H ++ D+ Y + A K + L ++M+Q+G P+
Sbjct: 417 KTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPD 471
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 140/334 (41%), Gaps = 9/334 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y L+ + + A ++ E+R G + D YN L+ A K + + F
Sbjct: 228 YKCLLQAHLRSNNSNKAFEVYVELRRRGYKLDIFAYNMLLDA----LAKDNKVDQVYMVF 283
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ MK + C+P+ TY I++R + D+ LF+E+ E P++ YN ++ A
Sbjct: 284 KDMK-RKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALAN 342
Query: 268 NGMIKEMESVLSRMK---SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
N M+ + + S+M SN+ I + L+ + K + ++F ++ ++
Sbjct: 343 NRMVDKTIFLFSKMVVEVSNKFMNKSI-YAYLVRTLSKLGHASEAHRLFCNMWSFHDEGD 401
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ SM+ + A +A + K+ + + + Y +++ G S ++++
Sbjct: 402 RDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYE 461
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
++ + G + + N ++ ++ G EA +FE N PD ++ L K
Sbjct: 462 KMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNG 521
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ K M + G+ P+ + +E F +
Sbjct: 522 DIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKT 555
>gi|297805706|ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316573|gb|EFH46996.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 680
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 168/381 (44%), Gaps = 38/381 (9%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L + + W + L + W+ ++ Y Y+ ++ + + Q +A LF EMR P
Sbjct: 131 LSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFGIAHGLFDEMRQRALAP 190
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKG-------------------------- 212
D Y+ LIT+ K AL + QKM+
Sbjct: 191 DRYTYSTLITSF----GKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKA 246
Query: 213 ---MERCK-----PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
R K P++V YN ++ +A+ + L KE++E+ ++P+ +Y+ ++
Sbjct: 247 ISIFSRLKRSGITPDLVAYNSMINVYGKAKLFKEARVLIKEMNEAGVSPNTVSYSTLLSV 306
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
Y +N E SV + MK C D+ T N++ID YG+ + +++F SL +P
Sbjct: 307 YVENHKFLEALSVFAEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPN 366
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ ++N+++ YG+A L G+A ++F+ M + +TY +I +YG +A +
Sbjct: 367 VVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQ 426
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E+ G + T + ++ + G A LF+ + GV D Y+ + AY +
Sbjct: 427 EMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVG 486
Query: 445 MKELVQKLLKRMEQNGIVPNK 465
+ ++LL ++ +P +
Sbjct: 487 LMGHAKRLLHELKLPDNIPRE 507
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 145/308 (47%), Gaps = 7/308 (2%)
Query: 134 WMQK--QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
W+QK Q D +YS LI + + A+ +FS ++ SG PD YN++I +
Sbjct: 214 WLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVY- 272
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KAK +A ++M PN V+Y+ LL + + ++F E+ E
Sbjct: 273 ---GKAKLFKEARVLIKEMNEAG-VSPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNC 328
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
D+ T N ++D YG+ M+KE + + ++ +P+++++N ++ YG+ + F +
Sbjct: 329 PLDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIH 388
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+F+ + + + T+N+MI YGK KA + Q+M + P+ ITY II+++G
Sbjct: 389 LFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWG 448
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ RA +F +L G ++ M+ AY GL A L P +
Sbjct: 449 KAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRET 508
Query: 432 TYKLLYKA 439
+L KA
Sbjct: 509 AITILAKA 516
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 151/334 (45%), Gaps = 9/334 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
+T YS L++V + + A+ +F+EM+ C D + N +I + + + +A
Sbjct: 296 NTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCPLDLTTCNIMIDVY----GQLDMVKEA 351
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F ++ M+ +PN+V+YN +LR +A + LF+ + + ++ TYN ++
Sbjct: 352 DRLFWSLRKMD-IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 410
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
YGK ++ +++ M+S +P+ IT++ +I +GK D+ +F+ L S +
Sbjct: 411 IYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEI 470
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ +MI+ Y + L G A+ + ++ P I E IT+ + A +F
Sbjct: 471 DQVLYQTMIVAYERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGSTEEATWVF 526
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ + G+ +S M+ Y N +FE G PDS+ ++ AY K
Sbjct: 527 RQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNAIAMVLNAYGKQ 586
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
E + + M++ G V + L +SS
Sbjct: 587 REFEKADTVYREMQEEGCVFPDEVHFQMLSLYSS 620
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 112/464 (24%), Positives = 203/464 (43%), Gaps = 27/464 (5%)
Query: 19 SSASSSSSSSSSSFNQSSSQNYNFT---HRHIPLSLRTRPRTGICCVWTRPRSKRGRKSE 75
SS+ ++ S S +FN +F H H P S+ + I + S S
Sbjct: 24 SSSHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSH 83
Query: 76 ELESKEL------VRVLMRSFSDKEPLVRTLNKYVKVVRSEH-----CF-LLFEELGKSD 123
+++S + + +L+ SF + L + K+++ H F L L
Sbjct: 84 QMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEG 143
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
K + L +F M + + + Y LI + K G T A+ L M C+PD VY
Sbjct: 144 KIGEVLHLFDKMIGEGFQ-PNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVY 202
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
++I + K + + +A F +M + P+I TYN L+ A V AL
Sbjct: 203 TSIIDSLC----KDRQVTQAFNLFSEMIH-QGISPSIFTYNSLIHALCNLCEWKHVTALL 257
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR 303
E+ S + P++ ++ V+DA K G + E V+ M +P+++T+N L+D + R
Sbjct: 258 NEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLR 317
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
D+ +VF +++ P + +++++I Y K + KA Y+F++M + P+ +TY
Sbjct: 318 SEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTY 377
Query: 364 ECIITMYGYCDNVSRARE---IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
+ M+G C +V R ++ +F E+ G+ + +L+ C N EA L +
Sbjct: 378 STL--MHGLC-HVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKA 434
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ PD Y ++ +A E + L + G+ PN
Sbjct: 435 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPN 478
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 133/315 (42%), Gaps = 48/315 (15%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
I+S ++ + K+G+ A + M G P+ YNAL+ H + + +A+
Sbjct: 271 IFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSE----MDEAVKV 326
Query: 207 FQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
F M KG P++V+Y+ L+ + + +++ LF+E+ L P+ TY+ +M
Sbjct: 327 FDTMVCKGF---APDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHG 383
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
G +++ ++ M + PD +++ +L+D K + D+ + K++ S P
Sbjct: 384 LCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPD 443
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ + +I +A G+ E AR++F
Sbjct: 444 IQIYTIVIDGMCRA---GELE--------------------------------AARDLFS 468
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
LS G V T M+ C GL EA LF G +P+ TY L+ + + + N
Sbjct: 469 NLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNN 528
Query: 445 MK----ELVQKLLKR 455
+L+Q++L R
Sbjct: 529 ETLRGIQLLQEMLAR 543
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 129/298 (43%), Gaps = 20/298 (6%)
Query: 72 RKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEV 131
++ + +E+ ++V ++++ EP V T N + HC L E+ ++ K V
Sbjct: 281 KEGKVMEAHDVVDMMIKR--GVEPNVVTYNA----LMDGHC--LRSEMDEAVK------V 326
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
F M + + D YS LI K + AM+LF EM P+ Y+ L +
Sbjct: 327 FDTM-VCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTL----M 381
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
H L A+ F +M + P+ V+Y ILL + R +D+ AL K + S +
Sbjct: 382 HGLCHVGRLQDAIALFHEMVTRGQI-PDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNM 440
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
PDI Y V+D + G ++ + S + S P++ T+ ++I+ ++ + +
Sbjct: 441 DPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASK 500
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
+F + P T+N + + + + + Q+M A ++ T ++ M
Sbjct: 501 LFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEM 558
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 3/201 (1%)
Query: 271 IKEMESVLS---RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+K +VLS +M S P+I T N+LI+S+ Q V ++ +P + T
Sbjct: 72 MKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIAT 131
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
FN++I G+ ++F KM + P+ +TY +I + S A + +
Sbjct: 132 FNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSME 191
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ V +++++ C + T+A LF + G++P TY L A +
Sbjct: 192 QGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWK 251
Query: 448 LVQKLLKRMEQNGIVPNKRFF 468
V LL M + I+PN F
Sbjct: 252 HVTALLNEMVNSKIMPNVVIF 272
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 152/327 (46%), Gaps = 13/327 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA--HLHTRDKAKALA 201
+T Y+ +I K G A L +EM+ PD Y+ LI A L + + L
Sbjct: 212 NTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTL- 270
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
F +M + PN+ T+N ++ + V+ + + + E + PD+ TYN +
Sbjct: 271 -----FLEMIHL-NIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMI 324
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+D YG G + + M + +PDII++N+LI+ Y +++ D+ QV + +
Sbjct: 325 IDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGL 384
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRA 379
KP++ T N ++ + A+ F +M + + P T+ C + + GY N V A
Sbjct: 385 KPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTH-CTL-LGGYFKNGLVEEA 442
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
F +L + +D + A+++ C NG +A FE +G+ PD TY +
Sbjct: 443 MSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISG 502
Query: 440 YTKANMKELVQKLLKRMEQNGIVPNKR 466
Y + + + + +L++ME NG + + R
Sbjct: 503 YCQEGLLDEAKDMLRKMEDNGCLADNR 529
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 160/400 (40%), Gaps = 75/400 (18%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L +K + +F+ + ++ + +Y ++ + KKG T+ A L M
Sbjct: 148 LIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQG 207
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
+P+ Y +I A K L A +MK + P+I TY+ L+ A +
Sbjct: 208 STKPNTRTYTIVIDAFC----KDGMLDGATSLLNEMK-QKSIPPDIFTYSTLIDALCKLS 262
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ V LF E+ + P++ T+N V+D K G +++ E ++ M PD+IT+N
Sbjct: 263 QWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYN 322
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR--------------- 339
++ID YG R D+ ++F S+++ +P + ++N +I Y + +
Sbjct: 323 MIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQK 382
Query: 340 ------------LQG--------KAEYVFQKMTAMKYTPSFITYECIITMY--------- 370
L G A+ F +M + + P T+ ++ Y
Sbjct: 383 GLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEA 442
Query: 371 ------------------------GYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEA 404
G C N + +A F++L +G V T AM+
Sbjct: 443 MSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISG 502
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
YC GL EA + + G D+ TY ++ + + ++N
Sbjct: 503 YCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSN 542
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/306 (18%), Positives = 115/306 (37%), Gaps = 41/306 (13%)
Query: 197 AKALAKALGYFQKMKGMERCKP--NIVTYNILLRACAQARNVDQVNALFKELHE------ 248
K L A F++M R KP ++ +++ LL+A ++ V +LF+E+H+
Sbjct: 50 VKCLDDAFSLFRQMV---RTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVH 106
Query: 249 ---------------------SILAPDI--------YTYNGVMDAYGKNGMIKEMESVLS 279
S+LA T+ ++ +K+ +
Sbjct: 107 EFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFK 166
Query: 280 RM-KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
++ + N C+P+ + + +++ K+ K + + + KP T+ +I + K
Sbjct: 167 KLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKD 226
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
+ A + +M P TY +I R +F E+ L V T
Sbjct: 227 GMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTF 286
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N++++ C G +A+ + GV PD TY ++ Y + +++ M
Sbjct: 287 NSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMIN 346
Query: 459 NGIVPN 464
I P+
Sbjct: 347 KSIEPD 352
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 68/158 (43%), Gaps = 5/158 (3%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
+I D + L+ K G AM F ++ + +Y A+I K L
Sbjct: 419 HIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLC----KNGKL 474
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
KA F+K+ + P+++TY ++ Q +D+ + +++ ++ D TYN
Sbjct: 475 DKAHATFEKLP-LIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNV 533
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
++ + ++ + EM++ L + + T LL+D
Sbjct: 534 IVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMD 571
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 112/464 (24%), Positives = 203/464 (43%), Gaps = 27/464 (5%)
Query: 19 SSASSSSSSSSSSFNQSSSQNYNFT---HRHIPLSLRTRPRTGICCVWTRPRSKRGRKSE 75
SS+ ++ S S +FN +F H H P S+ + I + S S
Sbjct: 33 SSSHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSH 92
Query: 76 ELESKEL------VRVLMRSFSDKEPLVRTLNKYVKVVRSEH-----CF-LLFEELGKSD 123
+++S + + +L+ SF + L + K+++ H F L L
Sbjct: 93 QMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEG 152
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
K + L +F M + + + Y LI + K G T A+ L M C+PD VY
Sbjct: 153 KIGEVLHLFDKMIGEGFQ-PNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVY 211
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
++I + K + + +A F +M + P+I TYN L+ A V AL
Sbjct: 212 TSIIDSLC----KDRQVTQAFNLFSEMIH-QGISPSIFTYNSLIHALCNLCEWKHVTALL 266
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR 303
E+ S + P++ ++ V+DA K G + E V+ M +P+++T+N L+D + R
Sbjct: 267 NEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLR 326
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
D+ +VF +++ P + +++++I Y K + KA Y+F++M + P+ +TY
Sbjct: 327 SEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTY 386
Query: 364 ECIITMYGYCDNVSRARE---IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
+ M+G C +V R ++ +F E+ G+ + +L+ C N EA L +
Sbjct: 387 STL--MHGLC-HVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKA 443
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ PD Y ++ +A E + L + G+ PN
Sbjct: 444 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPN 487
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 133/315 (42%), Gaps = 48/315 (15%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
I+S ++ + K+G+ A + M G P+ YNAL+ H + + +A+
Sbjct: 280 IFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSE----MDEAVKV 335
Query: 207 FQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
F M KG P++V+Y+ L+ + + +++ LF+E+ L P+ TY+ +M
Sbjct: 336 FDTMVCKGF---APDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHG 392
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
G +++ ++ M + PD +++ +L+D K + D+ + K++ S P
Sbjct: 393 LCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPD 452
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ + +I +A G+ E AR++F
Sbjct: 453 IQIYTIVIDGMCRA---GELE--------------------------------AARDLFS 477
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
LS G V T M+ C GL EA LF G +P+ TY L+ + + + N
Sbjct: 478 NLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNN 537
Query: 445 MK----ELVQKLLKR 455
+L+Q++L R
Sbjct: 538 ETLRGIQLLQEMLAR 552
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 129/298 (43%), Gaps = 20/298 (6%)
Query: 72 RKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEV 131
++ + +E+ ++V ++++ EP V T N + HC L E+ ++ K V
Sbjct: 290 KEGKVMEAHDVVDMMIKR--GVEPNVVTYNA----LMDGHC--LRSEMDEAVK------V 335
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
F M + + D YS LI K + AM+LF EM P+ Y+ L +
Sbjct: 336 FDTM-VCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTL----M 390
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
H L A+ F +M + P+ V+Y ILL + R +D+ AL K + S +
Sbjct: 391 HGLCHVGRLQDAIALFHEMVTRGQI-PDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNM 449
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
PDI Y V+D + G ++ + S + S P++ T+ ++I+ ++ + +
Sbjct: 450 DPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASK 509
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
+F + P T+N + + + + + Q+M A ++ T ++ M
Sbjct: 510 LFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEM 567
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 3/201 (1%)
Query: 271 IKEMESVLS---RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+K +VLS +M S P+I T N+LI+S+ Q V ++ +P + T
Sbjct: 81 MKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIAT 140
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
FN++I G+ ++F KM + P+ +TY +I + S A + +
Sbjct: 141 FNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSME 200
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ V +++++ C + T+A LF + G++P TY L A +
Sbjct: 201 QGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWK 260
Query: 448 LVQKLLKRMEQNGIVPNKRFF 468
V LL M + I+PN F
Sbjct: 261 HVTALLNEMVNSKIMPNVVIF 281
>gi|414869157|tpg|DAA47714.1| TPA: hypothetical protein ZEAMMB73_516901 [Zea mays]
Length = 853
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 153/310 (49%), Gaps = 10/310 (3%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L F+W+++Q + D Y+ +I ++G+ Q + L EM + C+P YN +I
Sbjct: 344 LGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVLKELLDEMSRAHCKPTVVTYNRII- 402
Query: 189 AHLHTRDKAKALAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
H +A L +A+ F++M+ G E P+ VTY L+ A+A +D L+ +
Sbjct: 403 ---HAYGRANYLKEAVKVFEEMQEAGYE---PDRVTYCTLIDIHAKAGYLDIAMDLYGRM 456
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
E L+PD +TY+ +++ GK G + + M N C P+++T+N++I K + +
Sbjct: 457 QEVGLSPDTFTYSVMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNY 516
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ + +++K + + +P T++ ++ G +AE VF +M + P Y +
Sbjct: 517 ENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR-RDWAPDEPVYGLL 575
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
+ ++G NV +A + + + G V T N++L A+ +A ++ +N G+
Sbjct: 576 VDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYIVLQNMLARGL 635
Query: 427 TPDSSTYKLL 436
P TY LL
Sbjct: 636 VPSVQTYTLL 645
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 119/269 (44%), Gaps = 15/269 (5%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
ALG+FQ +K K + TY ++ QAR + L E+ + P + TYN ++
Sbjct: 343 ALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVLKELLDEMSRAHCKPTVVTYNRII 402
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
AYG+ +KE V M+ +PD +T+ LID + K D ++ +
Sbjct: 403 HAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGLS 462
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P T++ M+ GK A +F +M TP+ +TY +I + ++AR
Sbjct: 463 PDTFTYSVMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQ------AKARN- 515
Query: 383 FDELSKLGKDMKVS-------TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
++ + KL KDM+V+ T + ++E G EA+ +F PD Y L
Sbjct: 516 YENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRR-DWAPDEPVYGL 574
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L + KA + + M Q+G+ PN
Sbjct: 575 LVDLWGKAGNVDKALGWYQAMLQDGLQPN 603
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 105/237 (44%), Gaps = 45/237 (18%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT YS ++ +GK GQ A LF EM +GC P+ L+T
Sbjct: 464 DTFTYSVMVNCLGKGGQLAAAYKLFCEMIENGCTPN------LVT--------------- 502
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
YNI++ A+ARN + V L+K++ + PD TY+ VM+
Sbjct: 503 -------------------YNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVME 543
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
G G + E E+V M+ + PD + LL+D +GK DK +++++ +P
Sbjct: 544 VLGHCGHLDEAEAVFIEMRRDWA-PDEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQP 602
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+PT NS++ + K A V Q M A PS TY +++ C V +A+
Sbjct: 603 NVPTCNSLLSAFLKMNRFQDAYIVLQNMLARGLVPSVQTYTLLLS----CCTVGQAQ 655
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%)
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
K D T+ +I G+ + F ++++ + + KPT+ T+N +I YG+A +A
Sbjct: 357 KHDGHTYTTMIGILGQARQFGVLKELLDEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVK 416
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
VF++M Y P +TY +I ++ + A +++ + ++G T + M+
Sbjct: 417 VFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYSVMVNCLG 476
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
G A LF G TP+ TY ++ KA E V KL K M+ G P+K
Sbjct: 477 KGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKI 536
Query: 467 FFLEALETFS 476
+ +E
Sbjct: 537 TYSIVMEVLG 546
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 167/381 (43%), Gaps = 40/381 (10%)
Query: 132 FRWMQKQ--RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
F++++ R I D + LI + G+T+ A W+ + SG PD YN LI+
Sbjct: 77 FKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISG 136
Query: 190 H---------LHTRDKAKALAKALGYF-------------QKMKGMER-----CKPNIVT 222
+ L D+ + Y Q M+ ++R C P+++T
Sbjct: 137 YCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVIT 196
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y IL+ A + V Q L E+ PD+ TYN +++ K G + E L+ M
Sbjct: 197 YTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 256
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
S C+P++IT N+++ S + E++ ++ P++ TFN +I + L G
Sbjct: 257 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 316
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNA 400
+A + +KM TP+ ++Y + ++G+C + RA E D + G + T N
Sbjct: 317 RAIDILEKMPMHGCTPNSLSYNPL--LHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNT 374
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+L A C +G A + + G +P TY + +K E KLL M + G
Sbjct: 375 LLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKG 434
Query: 461 IVPNKRFFLEALETFSSSLAG 481
+ P+ + T+SS ++G
Sbjct: 435 LKPD-------IITYSSLVSG 448
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 150/321 (46%), Gaps = 10/321 (3%)
Query: 115 LFEELGKSDKWLQCLEVF-RWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+ L S K Q +EV R +QK+ + D Y+ LI K+ AM L EMRN
Sbjct: 165 ILRTLCDSGKLKQAMEVLDRQLQKECY--PDVITYTILIEATCKESGVGQAMKLLDEMRN 222
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQ 232
G +PD YN LI K L +A+ + M C+PN++T+NI+LR+ C+
Sbjct: 223 KGSKPDVVTYNVLINGIC----KEGRLDEAIKFLNNMPSYG-CQPNVITHNIILRSMCST 277
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
R +D L ++ +P + T+N +++ + G++ +L +M + C P+ ++
Sbjct: 278 GRWMD-AEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLS 336
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N L+ + K + D+ + ++ P + T+N+++ K A + +++
Sbjct: 337 YNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLS 396
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ +P ITY +I RA ++ DE+ + G + T ++++ G
Sbjct: 397 SKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVD 456
Query: 413 EADLLFENSHNMGVTPDSSTY 433
EA F + +G+ P++ TY
Sbjct: 457 EAIKFFHDLEGLGIRPNAITY 477
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 143/346 (41%), Gaps = 14/346 (4%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIA-DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
G+ D LQ L+ R +A D Y+ ++ + G+ + AM + C P
Sbjct: 141 GEIDNALQVLD--------RMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYP 192
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
D Y LI A K + +A+ +M+ + KP++VTYN+L+ + +D+
Sbjct: 193 DVITYTILIEATC----KESGVGQAMKLLDEMRN-KGSKPDVVTYNVLINGICKEGRLDE 247
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+ P++ T+N ++ + G + E +LS M C P ++TFN+LI+
Sbjct: 248 AIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILIN 307
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
++ + + + + P ++N ++ + K + +A M + P
Sbjct: 308 FLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 367
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+TY ++T V A EI ++LS G + T N +++ G A L
Sbjct: 368 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 427
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ G+ PD TY L ++ + K +E GI PN
Sbjct: 428 DEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPN 473
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 110/243 (45%), Gaps = 5/243 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ LI + ++G A+ + +M GC P+ YN L LH K K + +A+ Y
Sbjct: 302 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPL----LHGFCKEKKMDRAIEYL 357
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
M C P+IVTYN LL A + VD + +L +P + TYN V+D K
Sbjct: 358 DIMVS-RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSK 416
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + +L M+ KPDIIT++ L+ + D+ + F L +P T
Sbjct: 417 VGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAIT 476
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+NS+++ K+R +A M + + P+ TY +I Y A ++ +EL
Sbjct: 477 YNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELC 536
Query: 388 KLG 390
G
Sbjct: 537 SRG 539
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 80/200 (40%), Gaps = 7/200 (3%)
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+NG +++ L M PDII LI + + K V + L S P +
Sbjct: 69 RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 128
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T+N +I Y K+ G+ + Q + M P +TY I+ + +A E+ D
Sbjct: 129 TYNVLISGYCKS---GEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDR- 184
Query: 387 SKLGKDM--KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+L K+ V T ++EA C +A L + N G PD TY +L K
Sbjct: 185 -QLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 243
Query: 445 MKELVQKLLKRMEQNGIVPN 464
+ K L M G PN
Sbjct: 244 RLDEAIKFLNNMPSYGCQPN 263
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 154/361 (42%), Gaps = 16/361 (4%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI-YSKLIAVMGKKGQTRLAMWLFSEMR 172
++ + L ++ + LE+FR + R +A T + Y+ +I + K M LF E+
Sbjct: 6 IVLQSLCRAGDTARALEIFRG-EMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELV 64
Query: 173 NSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
G PD YN LI + KA L +A M C PN+VTY++L+ +
Sbjct: 65 ERGHHPDVVTYNTLIDSLC----KAGDLEEARRLHGDMSS-RGCVPNVVTYSVLINGLCK 119
Query: 233 ARNVDQVNALFKEL--HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK--P 288
+D+ L +E+ + P+I TYN +D K M E ++ ++ + P
Sbjct: 120 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP 179
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
D +TF+ LID K D+ VF ++ P + T+N+++ KA +A +
Sbjct: 180 DTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMI 239
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV-----STLNAMLE 403
+ M TP ITY ++ + V A E+ ++ G V T N ++
Sbjct: 240 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIA 299
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
C G +A LFE + PD T+ L KA E + +L M G+ P
Sbjct: 300 GACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPP 359
Query: 464 N 464
N
Sbjct: 360 N 360
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 141/296 (47%), Gaps = 6/296 (2%)
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
L + +A A+AL F+ + P IVTYN ++ ++ ++ LF+EL E
Sbjct: 8 LQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERG 67
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
PD+ TYN ++D+ K G ++E + M S C P+++T+++LI+ K D+
Sbjct: 68 HHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEAR 127
Query: 311 QVFKSLMHSKEK--PTLPTFNSMIINYGKARLQGKAEYVFQKM--TAMKYTPSFITYECI 366
++ + + P + T+NS + K + +A + + + +++ +P +T+ +
Sbjct: 128 ELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTL 187
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I C + A +FD++ G V T NA++ C A + E+ + GV
Sbjct: 188 IDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGV 247
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGS 482
TPD TY +L A+ KA+ + +LL M G PN + TF+ +AG+
Sbjct: 248 TPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPN--VLVPDKVTFNILIAGA 301
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 169/395 (42%), Gaps = 27/395 (6%)
Query: 78 ESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQK 137
E++EL++ + R D P + T N + + L K + E+ R ++
Sbjct: 125 EARELIQEMTRKSCDVLPNIITYNSF------------LDGLCKQSMTAEACELMRSLRD 172
Query: 138 QRWYIA-DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
++ DT +S LI + K GQ A +F +M G P+ YNAL+ K
Sbjct: 173 GSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLC----K 228
Query: 197 AKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE-----S 249
A + +A + M KG+ P+++TY++L+ A +A VD+ L + +
Sbjct: 229 ADKMERAHAMIESMVDKGV---TPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPN 285
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+L PD T+N ++ K G ++ ++ M + +PD++TF LID K +
Sbjct: 286 VLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAA 345
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
+ + + P + T+N+++ K+ +A ++M + P ITY ++
Sbjct: 346 RDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYA 405
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
A ++ EL G D T N +++ +G +A + E G PD
Sbjct: 406 LCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPD 465
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
S T+ + ++ +LL+ + G++P+
Sbjct: 466 SFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPD 500
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 151/346 (43%), Gaps = 18/346 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCR--PDPSVYNALITAHLHTRDKAKALAKALG 205
Y+ + + K+ T A L +R+ R PD ++ LI K + +A
Sbjct: 147 YNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLC----KCGQIDEACS 202
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
F M PN++TYN L+ +A +++ +A+ + + + + PD+ TY+ ++DA+
Sbjct: 203 VFDDMIAGGY-VPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAF 261
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDI-----ITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
K + E +L M S C P++ +TFN+LI K F++ +F+ ++
Sbjct: 262 CKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKN 321
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSR 378
+P + TF ++I KA A + M + P+ +TY ++ +G C + +
Sbjct: 322 LQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALV--HGLCKSGRIEE 379
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A + +E+ G T +++ A C +A L + G PD+ TY +L
Sbjct: 380 ACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVD 439
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF--SSSLAGS 482
K+ E +L+ M G P+ F S +LAG+
Sbjct: 440 GLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGT 485
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 65/170 (38%), Gaps = 47/170 (27%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + K G+ A EM +SGC PD Y +L+ A +A AL
Sbjct: 364 YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALC----RASRTDDALQLV 419
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQV-------------------NALFKELHE 248
++K P+ VTYNIL+ ++ +Q A F LH
Sbjct: 420 SELKSFGW-DPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHR 478
Query: 249 S------------ILA----PDIYTYNGVMDAYGKNG-------MIKEME 275
S +LA PD T + ++D ++G MIKE E
Sbjct: 479 SGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528
>gi|168028441|ref|XP_001766736.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681945|gb|EDQ68367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 560
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 159/360 (44%), Gaps = 11/360 (3%)
Query: 99 TLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKK 158
TL +V R+ F + E L + L+ F W ++Q Y D Y+ +I +MG+
Sbjct: 21 TLVALSRVNRTLSAFHINEVLKHQKESGLALKFFDWAKEQEGYKHDVCTYTTMIGIMGRA 80
Query: 159 GQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKP 218
L EMR GC P YN LI H +A L +A+ F +M+ E C P
Sbjct: 81 RNFEACSRLLQEMRREGCEPCVVTYNRLI----HAYGRANFLGEAMRIFYQMQE-EGCSP 135
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
+ VTY L+ ++A D +++++ ++ PD +TY+ ++ GK G + E +
Sbjct: 136 DRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVIIHCLGKAGKVSEALKLF 195
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
M P ++T+N++ID K + +++ + + P T++ M+ G+
Sbjct: 196 EEMVERGFAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQDAGFHPDRVTYSIMMEVLGQI 255
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
+AE +F +M + P Y ++ M+G N RA E + ++ G V
Sbjct: 256 GHLQEAELMFNEMEQAGWVPDAPIYGVMVDMWGKARNAERALEWYQKMLDSGLTPNVQIS 315
Query: 399 NAMLEAYCMNGLPTEADLLF---ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
N++L +Y + DL F E G+ P T+ +L + T + V L+ R
Sbjct: 316 NSLLGSYLRM---QQFDLAFGVIETMKAWGLVPTLQTHTILLSSCTASAQHHQVVNLMHR 372
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 134/290 (46%), Gaps = 8/290 (2%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
AL +F K E K ++ TY ++ +ARN + + L +E+ P + TYN ++
Sbjct: 50 ALKFFDWAKEQEGYKHDVCTYTTMIGIMGRARNFEACSRLLQEMRREGCEPCVVTYNRLI 109
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
AYG+ + E + +M+ C PD +T+ L+D + K D +++ + + +
Sbjct: 110 HAYGRANFLGEAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQ 169
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P T++ +I GKA +A +F++M + PS +TY II + N A ++
Sbjct: 170 PDTFTYSVIIHCLGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGNYVMAMKL 229
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
++++ G T + M+E G EA+L+F G PD+ Y ++ + K
Sbjct: 230 YNDMQDAGFHPDRVTYSIMMEVLGQIGHLQEAELMFNEMEQAGWVPDAPIYGVMVDMWGK 289
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLT 492
A E + ++M +G+ PN + S+SL GS + DL
Sbjct: 290 ARNAERALEWYQKMLDSGLTPNVQ--------ISNSLLGSYLRMQQFDLA 331
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 145/301 (48%), Gaps = 5/301 (1%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ L +M G RPD YNA+I + TR + AL +F+++ G + +PN+VTY
Sbjct: 174 AVSLVDKMVEIGYRPDIVAYNAIIDSLCKTR----RVNDALDFFKEI-GRKGIRPNVVTY 228
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
L+ + + L +++ + + P++ TY+ ++DA+ KNG + E + + M
Sbjct: 229 TALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVR 288
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
PDI+T++ LI+ D+ Q+F ++ P + ++N++I + KA+
Sbjct: 289 MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVED 348
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
+F+KM+ + +TY +I + +V +A+E F ++ G + T N +L
Sbjct: 349 GMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLG 408
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
C NGL +A ++FE+ + D TY + + K E L + G+ P
Sbjct: 409 GLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKP 468
Query: 464 N 464
+
Sbjct: 469 D 469
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 127/279 (45%), Gaps = 15/279 (5%)
Query: 193 TRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILA 252
TR + L A+ F++M R P+IV +N LL A + + D V +L K++ +
Sbjct: 59 TRLRDIKLHDAINLFREMVK-TRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIR 117
Query: 253 PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
D+YT+N V++ + + SVL +M +PD +T L++ + +R +
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGY 372
++ +P + +N++I + K R A F+++ P+ +TY ++ G
Sbjct: 178 VDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVN--GL 235
Query: 373 CDNVSRAREIFDELSKLGKDM-------KVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
C N R +++ ++L +DM V T +A+L+A+ NG EA +FE M
Sbjct: 236 C-NSGR----WNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMS 290
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ PD TY L + + ++ M G P+
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPD 329
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 129/306 (42%), Gaps = 7/306 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + G+ A L +M P+ Y+AL+ A + K + +A F
Sbjct: 228 YTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFV----KNGKVLEAKEIF 283
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M M P+IVTY+ L+ +D+ N +F + PD+ +YN +++ + K
Sbjct: 284 EEMVRMS-IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCK 342
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+++ + +M + +T+N LI + + DK ++ F + P + T
Sbjct: 343 AKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWT 402
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N ++ L KA +F+ M + +TY +I V A +F LS
Sbjct: 403 YNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLS 462
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G + T M+ C GL E + L+ G+ + S L T + E
Sbjct: 463 LKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKNDSMLCLGDGDITIS--AE 520
Query: 448 LVQKLL 453
L++K+L
Sbjct: 521 LIKKML 526
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 13/189 (6%)
Query: 101 NKYVKVVRSEHCF-------LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIA 153
N+ ++ S+ CF L K+ + +++FR M QR + +T Y+ LI
Sbjct: 315 NQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMS-QRGLVNNTVTYNTLIQ 373
Query: 154 VMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGM 213
+ G A FS+M + G PD YN L+ L KAL F+ M+
Sbjct: 374 GFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDN----GLLEKALVIFEDMQKS 429
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
E +IVTY +++ + V+ LF L L PDI TY +M G+ E
Sbjct: 430 EM-DLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHE 488
Query: 274 MESVLSRMK 282
+E++ ++MK
Sbjct: 489 VEALYTKMK 497
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 4/190 (2%)
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P I+ FN L+ + K + +D + + K + + L TFN +I + A V
Sbjct: 83 PSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSV 142
Query: 348 FQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
KM + Y P +T ++ G+C + VS A + D++ ++G + NA++++
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVN--GFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSL 200
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
C +A F+ G+ P+ TY L + +LL+ M + I PN
Sbjct: 201 CKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNV 260
Query: 466 RFFLEALETF 475
+ L+ F
Sbjct: 261 ITYSALLDAF 270
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 161/357 (45%), Gaps = 41/357 (11%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT YS LI+ GK + A LF EM+ +G P +Y ++ + K + A
Sbjct: 229 DTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYF----KLNKVEAA 284
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L ++MKG + C P + TY L++ + VD +LF + + PD+ N +++
Sbjct: 285 LRLVEEMKG-KGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLIN 343
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA--------FDKME----- 310
G+ G +++ + +M S QC P+++T+N +I + + +A F+KM+
Sbjct: 344 ILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIA 403
Query: 311 -----------------QVFKSL-----MHSKEKPTLP-TFNSMIINYGKARLQGKAEYV 347
+V K+L M K P P + S+I + G+A+ A +
Sbjct: 404 PSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANEL 463
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
FQ++ S Y +I +G C +S A ++F E KLG V T NA++
Sbjct: 464 FQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIR 523
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G+ EA L N G TPD ++ ++ K + ++ +M+++ I+P+
Sbjct: 524 AGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPD 580
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 146/314 (46%), Gaps = 6/314 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y++LI +GK G+ A LF M GC+PD + N LI + +A L AL F
Sbjct: 303 YTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLI----NILGRAGRLEDALKLF 358
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL-FKELHESILAPDIYTYNGVMDAYG 266
KM ++ C PN+VTYN +++A +++ AL F+++ + +AP +TY ++D +
Sbjct: 359 GKMDSLQ-CAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFC 417
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K +++ +L M P + LIDS G+ + ++ ++F+ L + + +
Sbjct: 418 KTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSAR 477
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
+ MI ++G A +F + + +P TY +++ + A + +
Sbjct: 478 VYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNM 537
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
+ G + + N +L G P A +F + PD+ +Y + ++A M
Sbjct: 538 RENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMF 597
Query: 447 ELVQKLLKRMEQNG 460
E+ KL++ M+ G
Sbjct: 598 EMAAKLMREMKLKG 611
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 150/341 (43%), Gaps = 15/341 (4%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMW-LFSEMRNSGCRPDPSVYNALI 187
++ F+W K++ + D+ Y LI + + G MW +M S C P+ ++ +
Sbjct: 108 IQFFKWAGKRQHFQHDSTTYMALIRCLEESGLVD-EMWRTIQDMIRSPCSVGPAEWSEI- 165
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL- 246
L KAK + KAL F ++KG +C P YN L+ + ++++ L+ E+
Sbjct: 166 ---LKILGKAKMVNKALSVFYQIKG-RKCNPTATVYNTLILMLMHEGHHEKIHELYNEIC 221
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
E +PD TY+ ++ A+GK + MK N P + ++ Y K
Sbjct: 222 SEGNCSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFK---L 278
Query: 307 DKMEQVFKSLMHSKEK---PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
+K+E + + K K PT+ T+ +I GK A +F M P +
Sbjct: 279 NKVEAALRLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLI 338
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP-TEADLLFENSH 422
+I + G + A ++F ++ L V T N +++A + P +EA L FE
Sbjct: 339 NNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMK 398
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
G+ P S TY +L + K N E LL+ M++ G P
Sbjct: 399 ANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPP 439
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 7/228 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI K + A+ L EM G P P+ Y +LI + +AK A F
Sbjct: 409 YAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLI----DSLGRAKRYEAANELF 464
Query: 208 QKMKGMERC-KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
Q++K E C + + Y ++++ + LF E + +PD+YTYN +M
Sbjct: 465 QELK--ENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMI 522
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+ GMI E S++ M+ N C PDI + N++++ K + ++F + S+ P
Sbjct: 523 RAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAV 582
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
++N+++ +A + A + ++M + ITY I+ G D
Sbjct: 583 SYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAVGKVD 630
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 127/303 (41%), Gaps = 53/303 (17%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D + + LI ++G+ G+ A+ LF +M + C P+ YN +I A + KA A A
Sbjct: 334 DVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFES--KAPASEAA 391
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L +F+KMK P+ TY IL+ + V++ L +E+ E P Y ++D
Sbjct: 392 L-WFEKMKA-NGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLID 449
Query: 264 AYGKNGMIKEMESVLSRMKSN-----------------------------------QCKP 288
+ G+ + + +K N C P
Sbjct: 450 SLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSP 509
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
D+ T+N L+ + D+ + +++ + P + + N ++ K +A +F
Sbjct: 510 DVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMF 569
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS-------TLNAM 401
KM + P ++Y I++ +SRA +F+ +KL ++MK+ T +++
Sbjct: 570 TKMKESEIMPDAVSYNTILSC------LSRAG-MFEMAAKLMREMKLKGFEYDSITYSSI 622
Query: 402 LEA 404
LEA
Sbjct: 623 LEA 625
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 99/244 (40%), Gaps = 1/244 (0%)
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
TY L+R ++ VD++ +++ S + ++ ++ GK M+ + SV ++
Sbjct: 126 TYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVFYQI 185
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-KPTLPTFNSMIINYGKARL 340
K +C P +N LI +K+ +++ + P T++++I +GK
Sbjct: 186 KGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLER 245
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
A +F +M P+ Y I+ MY + V A + +E+ G V T
Sbjct: 246 YDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTE 305
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+++ G +A LF N G PD L +A E KL +M+
Sbjct: 306 LIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQ 365
Query: 461 IVPN 464
PN
Sbjct: 366 CAPN 369
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 167/381 (43%), Gaps = 40/381 (10%)
Query: 132 FRWMQKQ--RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
F++++ R I D + LI + G+T+ A W+ + SG PD YN LI+
Sbjct: 134 FKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISG 193
Query: 190 H---------LHTRDKAKALAKALGYF-------------QKMKGMER-----CKPNIVT 222
+ L D+ + Y Q M+ ++R C P+++T
Sbjct: 194 YCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVIT 253
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y IL+ A + V Q L E+ PD+ TYN +++ K G + E L+ M
Sbjct: 254 YTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 313
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
S C+P++IT N+++ S + E++ ++ P++ TFN +I + L G
Sbjct: 314 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 373
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNA 400
+A + +KM TP+ ++Y + ++G+C + RA E D + G + T N
Sbjct: 374 RAIDILEKMPMHGCTPNSLSYNPL--LHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNT 431
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+L A C +G A + + G +P TY + +K E KLL M + G
Sbjct: 432 LLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKG 491
Query: 461 IVPNKRFFLEALETFSSSLAG 481
+ P+ + T+SS ++G
Sbjct: 492 LKPD-------IITYSSLVSG 505
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 150/321 (46%), Gaps = 10/321 (3%)
Query: 115 LFEELGKSDKWLQCLEVF-RWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+ L S K Q +EV R +QK+ + D Y+ LI K+ AM L EMRN
Sbjct: 222 ILRTLCDSGKLKQAMEVLDRQLQKECY--PDVITYTILIEATCKESGVGQAMKLLDEMRN 279
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQ 232
G +PD YN LI K L +A+ + M C+PN++T+NI+LR+ C+
Sbjct: 280 KGSKPDVVTYNVLINGIC----KEGRLDEAIKFLNNMPSYG-CQPNVITHNIILRSMCST 334
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
R +D L ++ +P + T+N +++ + G++ +L +M + C P+ ++
Sbjct: 335 GRWMD-AEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLS 393
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N L+ + K + D+ + ++ P + T+N+++ K A + +++
Sbjct: 394 YNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLS 453
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ +P ITY +I RA ++ DE+ + G + T ++++ G
Sbjct: 454 SKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVD 513
Query: 413 EADLLFENSHNMGVTPDSSTY 433
EA F + +G+ P++ TY
Sbjct: 514 EAIKFFHDLEGLGIRPNAITY 534
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 143/346 (41%), Gaps = 14/346 (4%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIA-DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
G+ D LQ L+ R +A D Y+ ++ + G+ + AM + C P
Sbjct: 198 GEIDNALQVLD--------RMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYP 249
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
D Y LI A K + +A+ +M+ + KP++VTYN+L+ + +D+
Sbjct: 250 DVITYTILIEATC----KESGVGQAMKLLDEMRN-KGSKPDVVTYNVLINGICKEGRLDE 304
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+ P++ T+N ++ + G + E +LS M C P ++TFN+LI+
Sbjct: 305 AIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILIN 364
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
++ + + + + P ++N ++ + K + +A M + P
Sbjct: 365 FLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 424
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+TY ++T V A EI ++LS G + T N +++ G A L
Sbjct: 425 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 484
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ G+ PD TY L ++ + K +E GI PN
Sbjct: 485 DEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPN 530
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 110/243 (45%), Gaps = 5/243 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ LI + ++G A+ + +M GC P+ YN L LH K K + +A+ Y
Sbjct: 359 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPL----LHGFCKEKKMDRAIEYL 414
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
M C P+IVTYN LL A + VD + +L +P + TYN V+D K
Sbjct: 415 DIMVS-RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSK 473
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + +L M+ KPDIIT++ L+ + D+ + F L +P T
Sbjct: 474 VGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAIT 533
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+NS+++ K+R +A M + + P+ TY +I Y A ++ +EL
Sbjct: 534 YNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELC 593
Query: 388 KLG 390
G
Sbjct: 594 SRG 596
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 80/200 (40%), Gaps = 7/200 (3%)
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+NG +++ L M PDII LI + + K V + L S P +
Sbjct: 126 RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 185
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T+N +I Y K+ G+ + Q + M P +TY I+ + +A E+ D
Sbjct: 186 TYNVLISGYCKS---GEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDR- 241
Query: 387 SKLGKDM--KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+L K+ V T ++EA C +A L + N G PD TY +L K
Sbjct: 242 -QLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300
Query: 445 MKELVQKLLKRMEQNGIVPN 464
+ K L M G PN
Sbjct: 301 RLDEAIKFLNNMPSYGCQPN 320
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 179/399 (44%), Gaps = 43/399 (10%)
Query: 85 VLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIAD 144
+L R +S P + T N +K + EH + + +F MQK D
Sbjct: 130 ILRRGYS---PNIVTYNTLIKGLCMEH------------RISEATRLFLRMQKLGC-TPD 173
Query: 145 TGIYSKLIAVMGKKGQTRLAMWLFSEMRNS------GCRPDPSVYNALITA--HLHTRDK 196
Y LI + G +A+ L EM N C+P+ YN ++ + D+
Sbjct: 174 VVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDE 233
Query: 197 AKALAKALGYFQKMK--GM-------ERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
AK L F++MK GM + +P++VT+N+L+ + V + L +
Sbjct: 234 AKQL------FEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMI 287
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
ES + PD+ TYN +++ + G + + M S C+PD+I++N+LI+ Y K +
Sbjct: 288 ESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVE 347
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
+ +++ ++ ++P + T++S++ A A+ +F M A + TY I
Sbjct: 348 EAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYG--I 405
Query: 368 TMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+ G C N + A ++F EL +++ LN +++ C G A LFE N G
Sbjct: 406 FLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEG 465
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
P+ TY ++ + + + L+++ME NG P+
Sbjct: 466 HEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPD 504
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 114/250 (45%), Gaps = 6/250 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K K ++ ++ M + + D Y+ LI G A LF M +
Sbjct: 265 VLIDTLCKEGKVIEAKKLLGVM-IESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPS 323
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
GC PD YN LI + K + +A+ + +M + + +PN++TY+ LL+ A
Sbjct: 324 KGCEPDVISYNVLINGY----SKTLKVEEAMKLYNEMLLVGK-RPNVITYDSLLKGIFLA 378
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
VD LF + +A + YTY +D KN + E + + +KS+ K +I
Sbjct: 379 GKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENL 438
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N LID K + ++F+ L + +P + T+ MI + + KA + QKM A
Sbjct: 439 NCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEA 498
Query: 354 MKYTPSFITY 363
TP ITY
Sbjct: 499 NGCTPDIITY 508
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 163/389 (41%), Gaps = 51/389 (13%)
Query: 80 KELVRVLMRSFSDKEPLVRTLNKYV----KVVRSEHCFLLFEELGKSDKWLQCLEVFRWM 135
+E++ + R + +P V T N V KV R + LFEE+ K+ + + + +
Sbjct: 198 QEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEM-KTQGMIPNEMLDQGL 256
Query: 136 QKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRD 195
Q D ++ LI + K+G+ A L M SG PD YN+LI D
Sbjct: 257 Q------PDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGD 310
Query: 196 KAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
L A F M + C+P++++YN+L+ ++ V++ L+ E+ P++
Sbjct: 311 ----LNSARELFVSMPS-KGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNV 365
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
TY+ ++ G + + + + S MK++ + T+ + +D K + ++F
Sbjct: 366 ITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTE 425
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
L S K + N +I KA A +F+K++ + P+ +TY
Sbjct: 426 LKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTY------------ 473
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
M+ +C G +A++L + G TPD TY
Sbjct: 474 -----------------------TIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNT 510
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L + + ++N E V +LL RM Q + P+
Sbjct: 511 LMRGFYESNKLEEVVQLLHRMAQKDVSPD 539
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 121/316 (38%), Gaps = 23/316 (7%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
L S +S P P+ A H T + AL +F M P++ ++N L
Sbjct: 19 LSSLFTHSSAIPSPNPQIAFFLRHCKTGNVTAT--HALHFFHLMM-RSTPTPSLSSFNHL 75
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
L A+ ++ QV +L+ ++ S L+ D T N +++ ++E + + +
Sbjct: 76 LSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGY 135
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
P+I+T+N LI + ++F + P + T+ ++I A
Sbjct: 136 SPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALK 195
Query: 347 VFQKMT------AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG---------- 390
+ Q+M + P+ ITY I+ A+++F+E+ G
Sbjct: 196 LHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQG 255
Query: 391 --KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
DM T N +++ C G EA L G+ PD TY L + +
Sbjct: 256 LQPDM--VTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNS 313
Query: 449 VQKLLKRMEQNGIVPN 464
++L M G P+
Sbjct: 314 ARELFVSMPSKGCEPD 329
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 147/320 (45%), Gaps = 11/320 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + K G T A+ L M C+PD +Y ++I + K + + +A F
Sbjct: 173 YGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLC----KDRQVTEAFNLF 228
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M G + P+I TY L+ A V L ++ S + PD+ ++ V+DA K
Sbjct: 229 SQMVG-QGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCK 287
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + E ++ M +PD++T+ L+D + + D+ +VF ++ P + +
Sbjct: 288 EGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVIS 347
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE---IFD 384
+ ++I Y K KA Y+F++M ++ P TY + MYG C +V R ++ +F
Sbjct: 348 YTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTL--MYGLC-HVGRLQDAIALFH 404
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E+ G+ + T + +L++ C N EA L + + PD Y ++ +A
Sbjct: 405 EMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAG 464
Query: 445 MKELVQKLLKRMEQNGIVPN 464
E + L + G+ P+
Sbjct: 465 ELEAARDLFSNLSSKGLHPS 484
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 146/364 (40%), Gaps = 46/364 (12%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D IY+ +I + K Q A LFS+M G PD Y +L+ A L + K +
Sbjct: 204 DVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHA-LCNLCEWKHVTTL 262
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L K + P++V ++ ++ A + V + + + + + + PD+ TY +MD
Sbjct: 263 LNQMVNSKIL----PDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMD 318
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ + E V M PD+I++ LI+ Y K DK +F+ + + P
Sbjct: 319 GHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIP 378
Query: 324 TLPTFNSMIINYG---KARLQGKAEYVFQKMTAMKYTPSFITYECI-------------- 366
T+N+++ YG RLQ A +F +M A P +TY +
Sbjct: 379 DTKTYNTLM--YGLCHVGRLQ-DAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAM 435
Query: 367 -------------------ITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
I + G C + AR++F LS G V T N M+
Sbjct: 436 ALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGL 495
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
C GL EA+ LF +PD TY + + + + N +LL+ M G +
Sbjct: 496 CKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADS 555
Query: 466 RFFL 469
F +
Sbjct: 556 CFLM 559
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 138/329 (41%), Gaps = 40/329 (12%)
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNI--------- 225
G +PDP+ + LI L K + +AL F KM E +PN+VTY
Sbjct: 130 GHQPDPTTFTTLIRG-LCVEGK---IGEALHLFDKMID-EGFQPNVVTYGTLINGLCKVG 184
Query: 226 -------LLRACAQA-------------------RNVDQVNALFKELHESILAPDIYTYN 259
LLR+ Q R V + LF ++ ++PDI+TY
Sbjct: 185 NTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYT 244
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
++ A K + ++L++M +++ PD++ F+ ++D+ K + ++ ++
Sbjct: 245 SLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQR 304
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
+P + T+ +++ + +A VF M + P I+Y +I Y + +A
Sbjct: 305 GVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKA 364
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+F+E+ + T N ++ C G +A LF G PD TY +L +
Sbjct: 365 MYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDS 424
Query: 440 YTKANMKELVQKLLKRMEQNGIVPNKRFF 468
K E LLK +E + + P+ + +
Sbjct: 425 LCKNRHLEEAMALLKAIEASNLNPDIQVY 453
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 110/231 (47%), Gaps = 6/231 (2%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ ++VF M ++ + D Y+ LI K + AM+LF EM PD YN L
Sbjct: 328 EAVKVFD-MMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTL 386
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
+ H L A+ F +M + P++VTY+ILL + + R++++ AL K +
Sbjct: 387 MYGLCHV----GRLQDAIALFHEMVARGQ-MPDLVTYSILLDSLCKNRHLEEAMALLKAI 441
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
S L PDI YN ++D + G ++ + S + S P + T+N++I KR
Sbjct: 442 EASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLL 501
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
++ ++F + + P T+N++ + + +A + ++M A ++
Sbjct: 502 NEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFS 552
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 114/258 (44%), Gaps = 9/258 (3%)
Query: 135 MQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH--LH 192
M QR D Y+ L+ + + A+ +F M G PD Y LI + +H
Sbjct: 300 MMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIH 359
Query: 193 TRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILA 252
DKA L F++M E P+ TYN L+ + ALF E+
Sbjct: 360 KIDKAMYL------FEEMCRKEWI-PDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQM 412
Query: 253 PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
PD+ TY+ ++D+ KN ++E ++L ++++ PDI +N++ID + + +
Sbjct: 413 PDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDL 472
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGY 372
F +L P++ T+N MI K L +A +F +M +P TY I +
Sbjct: 473 FSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQ 532
Query: 373 CDNVSRAREIFDELSKLG 390
+ RA ++ +E+ G
Sbjct: 533 NNETLRAIQLLEEMLARG 550
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 91/216 (42%)
Query: 253 PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
P I + ++ + K + S+ ++M S P++ T N+LI+S+ V
Sbjct: 63 PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGY 372
++ +P TF ++I G+A ++F KM + P+ +TY +I
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 182
Query: 373 CDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
N S A + + + V +++++ C + TEA LF G++PD T
Sbjct: 183 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 242
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
Y L A + V LL +M + I+P+ F
Sbjct: 243 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIF 278
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 106/265 (40%), Gaps = 1/265 (0%)
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L AL F ++ M P+IV + LL + A+ ++ V +L ++ + P++YT N
Sbjct: 46 LDDALSSFNRLLHMHP-PPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLN 104
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
+++++ + SVL+++ +PD TF LI + +F ++
Sbjct: 105 ILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDE 164
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
+P + T+ ++I K A + + M P + Y II V+ A
Sbjct: 165 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEA 224
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+F ++ G + T +++ A C L N + PD + + A
Sbjct: 225 FNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDA 284
Query: 440 YTKANMKELVQKLLKRMEQNGIVPN 464
K +++ M Q G+ P+
Sbjct: 285 LCKEGKVTEAHEIVDMMIQRGVEPD 309
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 51/215 (23%)
Query: 100 LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG 159
+N Y K+ + + LFEE+ + + +I DT Y+ L+ + G
Sbjct: 352 INGYCKIHKIDKAMYLFEEMCRKE-----------------WIPDTKTYNTLMYGLCHVG 394
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALG----------YF 207
+ + A+ LF EM G PD Y+ L+ + R ++A AL KA+ Y
Sbjct: 395 RLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYN 454
Query: 208 QKMKGMERC------------------KPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ GM R P++ TYNI++ + +++ N LF E+ +
Sbjct: 455 IIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGN 514
Query: 250 ILAPDIYTYNGVMDAYGKNG----MIKEMESVLSR 280
+PD TYN + + +N I+ +E +L+R
Sbjct: 515 DCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLAR 549
>gi|115489794|ref|NP_001067384.1| Os12g0638900 [Oryza sativa Japonica Group]
gi|77556813|gb|ABA99609.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649891|dbj|BAF30403.1| Os12g0638900 [Oryza sativa Japonica Group]
gi|125580213|gb|EAZ21359.1| hypothetical protein OsJ_37016 [Oryza sativa Japonica Group]
Length = 859
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 161/372 (43%), Gaps = 47/372 (12%)
Query: 99 TLNKYVKVVRSEHC-------FLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKL 151
T+ K + + S HC + G+++ + ++VF MQK Y D Y L
Sbjct: 384 TMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYLREAVKVFEEMQKAG-YEPDRVTYCTL 442
Query: 152 IAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK 211
I + K G AM L++ M+ G PD Y+A++ K LA A F +M
Sbjct: 443 IDIHAKGGYLEFAMDLYTRMQEVGLSPDTFTYSAMVNC----LGKGGHLAAAYKLFCEMV 498
Query: 212 GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMI 271
C PN+VTYNI++ A+ARN + V L+K++ + PD TY+ VM+ G G +
Sbjct: 499 -ENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHL 557
Query: 272 KEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM 331
E E+V M+ + PD + LL+D +GK DK + +++ +P +PT NS+
Sbjct: 558 DEAEAVFIEMRHDWA-PDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSL 616
Query: 332 IINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT-------MYGYC----------- 373
+ + K A V Q M A PS TY +++ G C
Sbjct: 617 LSAFLKINRFQDAYSVLQNMLAQGLVPSLQTYTLLLSCCTEAQAQMGLCCQLMAITGHPA 676
Query: 374 --------------DNV-SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
NV R D + ++ K ++A+++ +GL EA ++
Sbjct: 677 HMFLLYLPDAEPGGQNVRDHTRYFLDMMHSEDRESKRGLMDAVIDFLHKSGLKEEAGFIW 736
Query: 419 ENSHNMGVTPDS 430
E + V PDS
Sbjct: 737 EVAAQRNVYPDS 748
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 154/320 (48%), Gaps = 10/320 (3%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L F+W+++Q + D Y+ +I ++G+ Q L EM + C+P YN +I
Sbjct: 350 LGFFQWLKRQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRII- 408
Query: 189 AHLHTRDKAKALAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
H +A L +A+ F++M+ G E P+ VTY L+ A+ ++ L+ +
Sbjct: 409 ---HAYGRANYLREAVKVFEEMQKAGYE---PDRVTYCTLIDIHAKGGYLEFAMDLYTRM 462
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
E L+PD +TY+ +++ GK G + + M N C P+++T+N++I K + +
Sbjct: 463 QEVGLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNY 522
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ + +++K + + +P T++ ++ G +AE VF +M + P Y +
Sbjct: 523 ENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR-HDWAPDEPVYGLL 581
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
+ ++G NV +A + + + G V T N++L A+ +A + +N G+
Sbjct: 582 VDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGL 641
Query: 427 TPDSSTYKLLYKAYTKANMK 446
P TY LL T+A +
Sbjct: 642 VPSLQTYTLLLSCCTEAQAQ 661
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 122/270 (45%), Gaps = 17/270 (6%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
ALG+FQ +K K + +Y ++ QAR + L E++ P + TYN ++
Sbjct: 349 ALGFFQWLKRQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRII 408
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
AYG+ ++E V M+ +PD +T+ LID + K + ++ +
Sbjct: 409 HAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEFAMDLYTRMQEVGLS 468
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P T+++M+ GK A +F +M TP+ +TY +I + ++AR
Sbjct: 469 PDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQ------AKARN- 521
Query: 383 FDELSKLGKDMKVS-------TLNAMLEAYCMNGLPTEADLLF-ENSHNMGVTPDSSTYK 434
++ + KL KDM+V+ T + ++E G EA+ +F E H+ PD Y
Sbjct: 522 YENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRHDW--APDEPVYG 579
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
LL + KA + M Q+G+ PN
Sbjct: 580 LLVDLWGKAGNVDKALGWYHAMLQDGLQPN 609
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%)
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
K D ++ +I G+ + F M ++ + KPT+ T+N +I YG+A +A
Sbjct: 363 KHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYLREAVK 422
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
VF++M Y P +TY +I ++ + A +++ + ++G T +AM+
Sbjct: 423 VFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEFAMDLYTRMQEVGLSPDTFTYSAMVNCLG 482
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
G A LF G TP+ TY ++ KA E V KL K M+ G P+K
Sbjct: 483 KGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKI 542
Query: 467 FFLEALETFS 476
+ +E
Sbjct: 543 TYSIVMEVLG 552
>gi|302768008|ref|XP_002967424.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
gi|300165415|gb|EFJ32023.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
Length = 546
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 162/340 (47%), Gaps = 7/340 (2%)
Query: 123 DKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSV 182
D W + L + WM ++ Y Y+ ++ + + Q LA L EM PD
Sbjct: 3 DDWQRSLALHDWMIEKGGYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFT 62
Query: 183 YNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL 242
++ LI+ + +A L A+G+ Q+M+ KP++V ++ L+ + ++ + +L
Sbjct: 63 FSTLISGY----GRANRLEDAMGWLQEMEA-GGIKPDLVIFSTLIELAGKVKDYSKATSL 117
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
F +L S +APD YN +++ YGK KE + +L+ MK PD +++ +LI++Y +
Sbjct: 118 FSKLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAE 177
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT-AMKYTPSFI 361
Q + + +QVF + + + T N MI YGK + AE +F M+ + + +
Sbjct: 178 SQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVV 237
Query: 362 TYECIITMYGYCDNVSRAREIFDEL-SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
TY +I +Y + +S A +F + +K G + V T N +L + + +A L
Sbjct: 238 TYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRK 297
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
G+ P++ TY L Y K + L K + + G
Sbjct: 298 MQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKG 337
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 124/249 (49%), Gaps = 2/249 (0%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+I YN++L+ +AR + L E+ E L PD +T++ ++ YG+ +++
Sbjct: 23 PSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANRLEDAMGW 82
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L M++ KPD++ F+ LI+ GK + + K +F L S P +NSMI YGK
Sbjct: 83 LQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINLYGK 142
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
A+ +A+ + +M P ++Y +I Y A+++F E+ G + V+T
Sbjct: 143 AKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLDVTT 202
Query: 398 LNAMLEAYCMNGLPTEADLLFEN-SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
N M++ Y + +A+ LF + S +G+ + TY + K Y +A + + M
Sbjct: 203 CNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYM 262
Query: 457 E-QNGIVPN 464
+ + G+ PN
Sbjct: 263 QNKGGVEPN 271
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 144/298 (48%), Gaps = 7/298 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D I+S LI + GK A LFS+++ SG PD +YN++I + KAK +A
Sbjct: 94 DLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINLY----GKAKFYKEA 149
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
G +MK P+ V+Y IL+ A A+++ + +F E+ + D+ T N ++D
Sbjct: 150 QGLLAEMKEA-GLMPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLDVTTCNMMID 208
Query: 264 AYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH-SKE 321
YGK M+++ E + M K+ + +++T+N +I Y + + + VF + +
Sbjct: 209 VYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGV 268
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
+P + T+N+++ +G KA + +KM P+ +TY +I++YG RA
Sbjct: 269 EPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAF 328
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+F L + G +M +M+ Y GL A L E + P + +L KA
Sbjct: 329 LFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELKQPDIVPRDTAISILAKA 386
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/398 (19%), Positives = 148/398 (37%), Gaps = 98/398 (24%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKA---- 199
D IY+ +I + GK + A L +EM+ +G PD Y LI A+ ++ +A
Sbjct: 129 DKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVF 188
Query: 200 -----------------LAKALGYFQKMKGMER----------CKPNIVTYNILLRACAQ 232
+ G + ++ E + N+VTYN +++ +
Sbjct: 189 LEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKE 248
Query: 233 ARNVDQV-NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
A + + N + ++ + P++ TYN ++ +G ++ ++ +M+ +P+ +
Sbjct: 249 AELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAV 308
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
T++ LI YGK +D+ +FK+L + + SMI+ Y +A L A+ + +++
Sbjct: 309 TYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEEL 368
Query: 352 TAMKYTP-------------------------------SFITYECIITMYGYCDNVSRAR 380
P +TY+ +I + + N R++
Sbjct: 369 KQPDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQL--FMRN-KRSK 425
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
D +FEN G PDS T +L AY
Sbjct: 426 NAID--------------------------------VFENMRESGFLPDSETTVVLLAAY 453
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ E +KL M + G K + L+ + +
Sbjct: 454 GQLRQLEDAEKLYLDMRERGCTLEKEVHFQMLKLYGDA 491
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 108/268 (40%), Gaps = 13/268 (4%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ VF +MQ + + Y+ ++ + G Q AM L +M+ G P+ Y+ L
Sbjct: 254 EAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTL 313
Query: 187 ITAHLHT--RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
I+ + T D+A L K L + KG E + + Y ++ +A V A K
Sbjct: 314 ISIYGKTGKYDRAAFLFKTL----REKGFEMDE---ILYQSMIVVYERAGLV----AHAK 362
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
L E + PDI + + K ++E + R + +T+ +I + + +
Sbjct: 363 RLLEELKQPDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLFMRNK 422
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
VF+++ S P T ++ YG+ R AE ++ M T +
Sbjct: 423 RSKNAIDVFENMRESGFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERGCTLEKEVHF 482
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKD 392
++ +YG + A ++F L G D
Sbjct: 483 QMLKLYGDARKIREAEDMFAALKLEGLD 510
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 171/403 (42%), Gaps = 76/403 (18%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
EV+ M + DT YS LI+ K G+ A+ LF EM+++ +P +Y L+
Sbjct: 218 EVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGI 277
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ K + KAL F++MK C P + TY L++ +A VD+ +K++
Sbjct: 278 YF----KVGKVEKALDLFEEMK-RAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRD 332
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA---- 305
L PD+ N +M+ GK G ++E+ +V S M +C P ++++N +I + + +A
Sbjct: 333 GLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSE 392
Query: 306 ----FDKME----------------------QVFKSL-----MHSKEKPTLPT-FNSMII 333
FDKM+ +V K+L M K P P + S+I
Sbjct: 393 VSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIN 452
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
GKA+ A+ +F+++ S Y +I +G C +S A ++F+E+ G
Sbjct: 453 ALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGP 512
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFE-----------NSHNM------------------ 424
V NA++ G+ EA+ L NSHN+
Sbjct: 513 DVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMF 572
Query: 425 ------GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
G+ PD TY L + A M E ++++ M+ G
Sbjct: 573 ETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGF 615
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 142/334 (42%), Gaps = 8/334 (2%)
Query: 130 EVFRWMQ---KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
E++R +Q + + + S+L+ +G+ A+ +F + + C+P S YN++
Sbjct: 144 EMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSV 203
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I + K + +M C P+ +TY+ L+ + + D LF E+
Sbjct: 204 ILMLMQEGQHEKVHE----VYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEM 259
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
++ + P Y ++ Y K G +++ + MK C P + T+ LI GK
Sbjct: 260 KDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRV 319
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
D+ +K ++ P + N+++ GK + VF +M + TP+ ++Y +
Sbjct: 320 DEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTV 379
Query: 367 I-TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
I ++ +VS FD++ T + +++ YC +A LL E G
Sbjct: 380 IKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKG 439
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
P + Y L A KA E +L K +++N
Sbjct: 440 FPPCPAAYCSLINALGKAKRYEAADELFKELKEN 473
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 149/341 (43%), Gaps = 14/341 (4%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM----RNSGCRPDPSVYN 184
++ F+W K+R + D Y LI + + RL ++ + RN+ P+V +
Sbjct: 110 IQFFKWAGKRRNFQHDCSTYMTLIRCL---EEARLYGEMYRTIQEVVRNTYVSVSPAVLS 166
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
L+ A +AK ++KAL F + KG +CKP TYN ++ Q ++V+ ++
Sbjct: 167 ELVKA----LGRAKMVSKALSVFYQAKG-RKCKPTSSTYNSVILMLMQEGQHEKVHEVYT 221
Query: 245 EL-HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR 303
E+ +E PD TY+ ++ +Y K G + MK N +P + L+ Y K
Sbjct: 222 EMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKV 281
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
+K +F+ + + PT+ T+ +I GKA +A ++ M TP +
Sbjct: 282 GKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFL 341
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA-YCMNGLPTEADLLFENSH 422
++ + G V +F E+ V + N +++A + +E F+
Sbjct: 342 NNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMK 401
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
V+P TY +L Y K N E LL+ M++ G P
Sbjct: 402 ADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPP 442
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 119/253 (47%), Gaps = 17/253 (6%)
Query: 130 EVFRWMQKQRWYIADTG-----IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
EV W K + AD+ YS LI K + A+ L EM G P P+ Y
Sbjct: 392 EVSSWFDKMK---ADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYC 448
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVT--YNILLRACAQARNVDQVNAL 242
+LI A KAK A F+++K N+ + Y ++++ + + + L
Sbjct: 449 SLINA----LGKAKRYEAADELFKELK---ENFGNVSSRVYAVMIKHFGKCGKLSEAVDL 501
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
F E+ PD+Y YN +M K GMI E S+L +M+ N C+ DI + N++++ + +
Sbjct: 502 FNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFAR 561
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ ++F+++ HS KP T+N+++ + A + +A + ++M + IT
Sbjct: 562 TGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAIT 621
Query: 363 YECIITMYGYCDN 375
Y I+ G D+
Sbjct: 622 YSSILDAVGNVDH 634
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 71/177 (40%), Gaps = 7/177 (3%)
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM- 354
L+ + G+ + K VF K KPT T+NS+I+ + +G+ E V + T M
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQ---EGQHEKVHEVYTEMC 224
Query: 355 ---KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P ITY +I+ Y A +FDE+ +L Y G
Sbjct: 225 NEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKV 284
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+A LFE G +P TY L K KA + K M ++G+ P+ F
Sbjct: 285 EKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFL 341
>gi|449443502|ref|XP_004139516.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Cucumis sativus]
gi|449492820|ref|XP_004159111.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic-like [Cucumis sativus]
Length = 704
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 187/416 (44%), Gaps = 20/416 (4%)
Query: 62 VWTRPRSKRGRK----SEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSE----HCF 113
VW PRS R K S E L+RV S P + +KV+ +
Sbjct: 92 VWVNPRSPRASKLRKQSYEARYASLIRV-SESLDSSNPCEVDVADVLKVIGNNILERDAI 150
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
L+ + S L L F+ M K T Y+ + V K A LF EM N
Sbjct: 151 LVLNNMSNSQTALLALRYFQDMLKSS---KQTIFYNVTLKVFRKCRDMEGAEKLFEEMIN 207
Query: 174 SGCRPDPSVYNALIT-AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
G +PD ++ +I+ A L + +KA+ +F+KM + C P+ VTY+ ++ A +
Sbjct: 208 RGVKPDNVTFSTIISCARLCSLP-----SKAVEWFEKMPSFD-CNPDDVTYSTMIDAYGR 261
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
A NVD +L+ D T++ ++ +G G +V MK+ KP+++
Sbjct: 262 AGNVDMAFSLYDRARTENWRIDPATFSTMIKIHGVAGNYDGCLNVYEEMKAIGIKPNLVI 321
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N L+D+ G+ + +++ ++K ++ + P+ T+ S++ YG+AR A V+++M
Sbjct: 322 YNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLRAYGRARYGEDALIVYKEMK 381
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS-TLNAMLEAYCMNGLP 411
+ I Y ++ M V+ A EIF ++ G S T ++M+ Y G
Sbjct: 382 EKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGTCSPDSWTFSSMITIYSCGGKV 441
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
+EA+ + + G P+ L + Y KA + V + ++ + G+ P+ RF
Sbjct: 442 SEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRTFNQLIELGLTPDDRF 497
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 106/262 (40%), Gaps = 41/262 (15%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS +I G+ G +A L+ R R DP+ ++ +I H A
Sbjct: 248 DDVTYSTMIDAYGRAGNVDMAFSLYDRARTENWRIDPATFSTMIKIH----GVAGNYDGC 303
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L +++MK + KPN+V YN LL A +A+ Q+ ++KE+ ++ +P TY ++
Sbjct: 304 LNVYEEMKAI-GIKPNLVIYNCLLDAMGRAKRPWQIKTIYKEMIKNGFSPSWATYASLLR 362
Query: 264 AYGKN-----------------------------------GMIKEMESVLSRMKSN-QCK 287
AYG+ G + E + MKS+ C
Sbjct: 363 AYGRARYGEDALIVYKEMKEKGLQLNVILYNTLLAMCADVGYVNEAVEIFQDMKSSGTCS 422
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
PD TF+ +I Y + E++ ++ + P + S+I YGKA+
Sbjct: 423 PDSWTFSSMITIYSCGGKVSEAEEMLNDMVEAGFDPNIFVLTSLIQCYGKAKRVDDVVRT 482
Query: 348 FQKMTAMKYTPSFITYECIITM 369
F ++ + TP C++ +
Sbjct: 483 FNQLIELGLTPDDRFCGCLLNV 504
>gi|302753732|ref|XP_002960290.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
gi|300171229|gb|EFJ37829.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
Length = 546
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 162/340 (47%), Gaps = 7/340 (2%)
Query: 123 DKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSV 182
D W + L + WM ++ Y Y+ ++ + + Q LA L EM PD
Sbjct: 3 DDWQRSLALHDWMIEKGGYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFT 62
Query: 183 YNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL 242
++ LI+ + +A L A+G+ Q+M+ KP++V ++ L+ + ++ + +L
Sbjct: 63 FSTLISGY----GRANRLEDAMGWLQEMEA-GGIKPDLVIFSTLIELAGKVKDYSKATSL 117
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
F +L S +APD YN +++ YGK KE + +L+ MK PD +++ +LI++Y +
Sbjct: 118 FSKLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAE 177
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT-AMKYTPSFI 361
Q + + +QVF + + + T N MI YGK + AE +F M+ + + +
Sbjct: 178 SQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVV 237
Query: 362 TYECIITMYGYCDNVSRAREIFDEL-SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
TY +I +Y + +S A +F + +K G + V T N +L + + +A L
Sbjct: 238 TYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRK 297
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
G+ P++ TY L Y K + L K + + G
Sbjct: 298 MQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKG 337
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 124/249 (49%), Gaps = 2/249 (0%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+I YN++L+ +AR + L E+ E L PD +T++ ++ YG+ +++
Sbjct: 23 PSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANRLEDAMGW 82
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L M++ KPD++ F+ LI+ GK + + K +F L S P +NSMI YGK
Sbjct: 83 LQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINLYGK 142
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
A+ +A+ + +M P ++Y +I Y A+++F E+ G + V+T
Sbjct: 143 AKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLDVTT 202
Query: 398 LNAMLEAYCMNGLPTEADLLFEN-SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
N M++ Y + +A+ LF + S +G+ + TY + K Y +A + + M
Sbjct: 203 CNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYM 262
Query: 457 E-QNGIVPN 464
+ + G+ PN
Sbjct: 263 QNKGGVEPN 271
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 144/298 (48%), Gaps = 7/298 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D I+S LI + GK A LFS+++ SG PD +YN++I + KAK +A
Sbjct: 94 DLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINLY----GKAKFYKEA 149
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
G +MK P+ V+Y IL+ A A+++ + +F E+ + D+ T N ++D
Sbjct: 150 QGLLAEMKEA-GLMPDTVSYTILINAYAESQKYLEAKQVFLEMKTKGIQLDVTTCNMMID 208
Query: 264 AYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH-SKE 321
YGK M+++ E + M K+ + +++T+N +I Y + + + VF + +
Sbjct: 209 VYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGV 268
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
+P + T+N+++ +G KA + +KM P+ +TY +I++YG RA
Sbjct: 269 EPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAF 328
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+F L + G +M +M+ Y GL A L E + P + +L KA
Sbjct: 329 LFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELKQPDIVPRDTAISILAKA 386
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/398 (19%), Positives = 148/398 (37%), Gaps = 98/398 (24%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKA---- 199
D IY+ +I + GK + A L +EM+ +G PD Y LI A+ ++ +A
Sbjct: 129 DKVIYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVF 188
Query: 200 -----------------LAKALGYFQKMKGMER----------CKPNIVTYNILLRACAQ 232
+ G + ++ E + N+VTYN +++ +
Sbjct: 189 LEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKE 248
Query: 233 ARNVDQV-NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
A + + N + ++ + P++ TYN ++ +G ++ ++ +M+ +P+ +
Sbjct: 249 AELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAV 308
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
T++ LI YGK +D+ +FK+L + + SMI+ Y +A L A+ + +++
Sbjct: 309 TYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEEL 368
Query: 352 TAMKYTP-------------------------------SFITYECIITMYGYCDNVSRAR 380
P +TY+ +I + + N R++
Sbjct: 369 KQPDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQL--FVRN-KRSK 425
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
D +FEN G PDS T +L AY
Sbjct: 426 NAID--------------------------------VFENMRESGFLPDSETTVVLLAAY 453
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ E +KL M + G K + L+ + +
Sbjct: 454 GQLRQLEDAEKLYLDMRERGCTLEKEVHFQMLKLYGDA 491
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 108/268 (40%), Gaps = 13/268 (4%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ VF +MQ + + Y+ ++ + G Q AM L +M+ G P+ Y+ L
Sbjct: 254 EAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTL 313
Query: 187 ITAHLHT--RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
I+ + T D+A L K L + KG E + + Y ++ +A V A K
Sbjct: 314 ISIYGKTGKYDRAAFLFKTL----REKGFEMDE---ILYQSMIVVYERAGLV----AHAK 362
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
L E + PDI + + K ++E + R + +T+ +I + + +
Sbjct: 363 RLLEELKQPDIVPRDTAISILAKAEKLEEAAKLYWRSHEAGEIKESVTYKSMIQLFVRNK 422
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
VF+++ S P T ++ YG+ R AE ++ M T +
Sbjct: 423 RSKNAIDVFENMRESGFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMRERGCTLEKEVHF 482
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKD 392
++ +YG + A ++F L G D
Sbjct: 483 QMLKLYGDARKIREAEDMFAALKLEGLD 510
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 153/314 (48%), Gaps = 13/314 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + K G TR A+ ++ +PD +YN +I A K + +++A G F
Sbjct: 167 YATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMC----KYQLVSEAYGLF 222
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M ++ ++VTYN L+ + + L E+ + P++YTYN ++DA K
Sbjct: 223 SEM-AVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCK 281
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G +KE +SVL+ M KPD+IT++ L+D Y K + VF ++ P + T
Sbjct: 282 EGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHT 341
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDE 385
+ +I + K ++ +A +F++M P +TY +I G C + +S ++ DE
Sbjct: 342 YTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID--GLCKSGRISYVWDLIDE 399
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA-- 443
+ G+ V T +++++ C NG A LF + + P+ T+ +L K
Sbjct: 400 MRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGR 459
Query: 444 --NMKELVQKLLKR 455
+ +E+ Q LL +
Sbjct: 460 LKDAQEVFQDLLTK 473
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 157/355 (44%), Gaps = 16/355 (4%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+R Y DT + LI + KGQ + A+ ++ G + + Y LI D
Sbjct: 122 KRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTR 181
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
A+ + +K+ G KP++V YN ++ A + + V + LF E+ ++ D+ T
Sbjct: 182 AAIK----FLRKIDG-RLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVT 236
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN ++ + G +KE +L+ M P++ T+N+L+D+ K + + V ++
Sbjct: 237 YNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN-- 375
+ KP + T+++++ Y KA++VF M+ M TP TY +I G+C N
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILIN--GFCKNKM 354
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
V A +F E+ + + T +++++ C +G + L + + G D TY
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSS 414
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTD 490
L K + L +M+ I PN + TF+ L G G D
Sbjct: 415 LIDGLCKNGHLDRAIALFNKMKDQEIRPN-------IFTFTILLDGLCKGGRLKD 462
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 143/322 (44%), Gaps = 9/322 (2%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
AD Y+ LI G+ + A+ L +EM P+ YN L+ A L K K
Sbjct: 232 ADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDA-LCKEGKVKEAKS 290
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
L K KP+++TY+ L+ V + +F + + PD++TY ++
Sbjct: 291 VLAVMLK----ACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILI 346
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+ + KN M+ E ++ M P I+T++ LID K + + + +
Sbjct: 347 NGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQP 406
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAR 380
+ T++S+I K +A +F KM + P+ T+ I + G C + A+
Sbjct: 407 ADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFT--ILLDGLCKGGRLKDAQ 464
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
E+F +L G + V T N M+ +C GL EA + + G P++ T++ + A
Sbjct: 465 EVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIAL 524
Query: 441 TKANMKELVQKLLKRMEQNGIV 462
K + + +KLL++M G++
Sbjct: 525 FKKDENDKAEKLLRQMIARGLL 546
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 141/366 (38%), Gaps = 83/366 (22%)
Query: 189 AHLHTRDKA-KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
+H H++ + + + A+ F +M M R P I+ +N +L + A+ ++ +L L
Sbjct: 28 SHFHSQPPSIQNVDDAVSQFNRMLCM-RHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLE 86
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR---- 303
+ PD+ T N +++ + G I SVL+++ PD +T N LI +
Sbjct: 87 LKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVK 146
Query: 304 -----------QAFDKMEQVFKSLMHSK--------------------EKPTLPTFNSMI 332
Q F + + +L++ KP + +N++I
Sbjct: 147 KALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTII 206
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLG 390
K +L +A +F +M + +TY +I YG+C + A + +E+
Sbjct: 207 DAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLI--YGFCIVGKLKEAIGLLNEMVLKT 264
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEA--------------DLL------------------- 417
+ V T N +++A C G EA D++
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQ 324
Query: 418 --FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
F MGVTPD TY +L + K M + L K M Q +VP + T+
Sbjct: 325 HVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVP-------GIVTY 377
Query: 476 SSSLAG 481
SS + G
Sbjct: 378 SSLIDG 383
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 40/181 (22%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
+ R AD YS LI + K G A+ LF++M++ R
Sbjct: 401 RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIR------------------- 441
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
PNI T+ ILL + + +F++L ++Y
Sbjct: 442 ---------------------PNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVY 480
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TYN +++ + K G+++E ++LS+M+ N C P+ TF +I + K+ DK E++ + +
Sbjct: 481 TYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 540
Query: 317 M 317
+
Sbjct: 541 I 541
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 145/324 (44%), Gaps = 9/324 (2%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
IY+ LI K G LA LF +M G P+P Y+ L+ + +
Sbjct: 195 IYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREG------- 247
Query: 207 FQKMKGMERCK--PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
FQ + M+R PN YN L+ VD+ +F E+ E +A + TYN ++
Sbjct: 248 FQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGG 307
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ E ++ ++ P+I+T+N+LI+ + + D ++F L S PT
Sbjct: 308 LCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPT 367
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
L T+N++I Y K A + ++M PS +TY +I + ++ +A E+
Sbjct: 368 LVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHS 427
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ K G V T + +L C++G EA LF++ M + P+S Y + Y K
Sbjct: 428 LMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEG 487
Query: 445 MKELVQKLLKRMEQNGIVPNKRFF 468
+LL M Q+G+VPN F
Sbjct: 488 SSYRALRLLNEMVQSGMVPNVASF 511
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 137/305 (44%), Gaps = 9/305 (2%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + + Y+ LI+ G A +F+EMR G YN LI +
Sbjct: 255 KRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGG----LCR 310
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
K +A+ K+ + PNIVTYNIL+ R +D LF +L S L+P +
Sbjct: 311 GKKFGEAVKLVHKVNKVGL-SPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLV 369
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TYN ++ Y K + ++ M+ P +T+ +LID++ + +K ++ +
Sbjct: 370 TYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLM 429
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
S P + T++ ++ +A +F+ + M P+ + Y +I +GYC
Sbjct: 430 EKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMI--HGYCKEG 487
Query: 377 S--RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
S RA + +E+ + G V++ + + C + EA+LL N G+ P S YK
Sbjct: 488 SSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYK 547
Query: 435 LLYKA 439
+++K
Sbjct: 548 MVHKV 552
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 148/326 (45%), Gaps = 24/326 (7%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ L+ ++ + A W+F+E++ S D + +I K +A GYF
Sbjct: 127 FNNLLCLLIRSNYFDKAWWIFNELK-SKVVLDAYSFGIMI----------KGCCEA-GYF 174
Query: 208 QK----MKGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
K + +E PN+V Y L+ C + NV LF +++ L P+ +TY+ +
Sbjct: 175 VKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVL 234
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
M+ + K G+ +E + MK + P+ +N LI Y DK +VF +
Sbjct: 235 MNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGI 294
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRA 379
+ T+N +I + + G+A + K+ + +P+ +TY +I G+CD + A
Sbjct: 295 ACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILIN--GFCDVRKMDSA 352
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYC-MNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
+F++L G + T N ++ Y + L DL+ E + P TY +L
Sbjct: 353 VRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERC-IAPSKVTYTILID 411
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPN 464
A+ + N E ++ ME++G+VP+
Sbjct: 412 AFARLNHTEKACEMHSLMEKSGLVPD 437
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/334 (20%), Positives = 144/334 (43%), Gaps = 10/334 (2%)
Query: 145 TGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKAL 204
T +Y ++ T A+ M + G P + +N L+ + ++ KA
Sbjct: 89 TPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLI----RSNYFDKAW 144
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
F ++K + + ++ I+++ C +A + L L E L+P++ Y ++D
Sbjct: 145 WIFNELK--SKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDG 202
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
K+G + +++ +M P+ T+++L++ + K+ + Q+++++ S P
Sbjct: 203 CCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPN 262
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREI 382
+N +I Y + KA VF +M +TY +I G C A ++
Sbjct: 263 AYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIG--GLCRGKKFGEAVKL 320
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+++K+G + T N ++ +C A LF + G++P TY L Y+K
Sbjct: 321 VHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSK 380
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
L+K ME+ I P+K + ++ F+
Sbjct: 381 VENLAGALDLVKEMEERCIAPSKVTYTILIDAFA 414
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 90/214 (42%), Gaps = 21/214 (9%)
Query: 269 GMIKEMESVLSRMKSNQ----------------CKPDIITFNLLIDSYGKRQAFDKMEQV 312
GM+ + +S++ R+ S + C ++ ++++Y + D+
Sbjct: 52 GMLPQAQSLILRLISGRIPSSLMLQLTQAHFTPCSTYTPLYDTVVNAYVHSHSTDQALTF 111
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGY 372
++H P TFN+++ ++ KA ++F + +K Y I + G
Sbjct: 112 LHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNE---LKSKVVLDAYSFGIMIKGC 168
Query: 373 CDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
C+ + + L + G V +++ C +G A LF + +G+ P+
Sbjct: 169 CEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNP 228
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
TY +L + K ++ ++ + M+++GIVPN
Sbjct: 229 HTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPN 262
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 163/341 (47%), Gaps = 16/341 (4%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L + + M+K + AD IY+ +I + A+ LF+EM N G RP+ YN+LI
Sbjct: 240 LSLLKKMEKGKIE-ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 189 AHLHT---RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
+ D ++ L+ + + PN+VT++ L+ A + + + L+ E
Sbjct: 299 CLCNYGRWSDASRLLSDMIE--------RKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ + + PDI+TY+ +++ + + + E + + M S C P+++T+N LI + K +
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
++ ++F+ + T+N++I +A A+ +F+KM + P ITY
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS- 469
Query: 366 IITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
I + G C + +A +F+ L K + + T N M+E C G + LF +
Sbjct: 470 -ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 528
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
GV P+ Y + + + +KE L + M+++G +PN
Sbjct: 529 KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 569
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 140/319 (43%), Gaps = 44/319 (13%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH-LHTR-DKAKALAKALG 205
+S LI K+G+ A L+ EM PD Y++LI +H R D+AK +
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM----- 382
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
F+ M + C PN+VTYN L++ +A+ V++ LF+E+ + L + TYN ++
Sbjct: 383 -FELMISKD-CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ G + + +M S+ PDIIT+++L+D K +K VF+ L SK +P +
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+N MI KA GK E ++F
Sbjct: 501 YTYNIMIEGMCKA---GKVE--------------------------------DGWDLFCS 525
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
LS G V M+ +C GL EAD LF G P+S TY L +A +
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 585
Query: 446 KELVQKLLKRMEQNGIVPN 464
K +L+K M G V +
Sbjct: 586 KAASAELIKEMRSCGFVGD 604
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 152/355 (42%), Gaps = 46/355 (12%)
Query: 148 YSKLIAVMGK-----------------------------------KGQTRLAMWLFSEMR 172
++KL++ + K + Q LA+ + +M
Sbjct: 83 FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMM 142
Query: 173 NSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
G PD ++L+ + H K +++A+ +M ME +PN VT+N L+
Sbjct: 143 KLGYEPDIVTLSSLLNGYCH----GKRISEAVALVDQMFVMEY-QPNTVTFNTLIHGLFL 197
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+ AL + PD++TY V++ K G I S+L +M+ + + D++
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI---INYGKARLQGKAEYVFQ 349
+ +ID+ + + +F + + +P + T+NS+I NYG+ A +
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR---WSDASRLLS 314
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
M K P+ +T+ +I + + A +++DE+ K D + T ++++ +CM+
Sbjct: 315 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA +FE + P+ TY L K + KA E +L + M Q G+V N
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 429
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/384 (20%), Positives = 164/384 (42%), Gaps = 39/384 (10%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + K +K+ + + MQ R D Y+ LI ++ Q LA+ + +M
Sbjct: 86 LLSAIAKMNKFDLVISLGERMQNLRISY-DLYSYNILINCFCRRSQLPLALAVLGKMMKL 144
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKA-------------------LGYFQKMKGMER 215
G PD ++L+ + H + ++A+A G F K E
Sbjct: 145 GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEA 204
Query: 216 -----------CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
C+P++ TY ++ + ++D +L K++ + + D+ Y ++DA
Sbjct: 205 VALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDA 264
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ + ++ + M + +P+++T+N LI + ++ ++ K P
Sbjct: 265 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 324
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREI 382
+ TF+++I + K +AE ++ +M P TY +I G+C D + A+ +
Sbjct: 325 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN--GFCMHDRLDEAKHM 382
Query: 383 FDELSKLGKDM--KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
F+ + + KD V T N +++ +C E LF G+ ++ TY L +
Sbjct: 383 FELM--ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
+A ++ QK+ K+M +G+ P+
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPD 464
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 122/255 (47%), Gaps = 10/255 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + K K ++ +++ M K R D YS LI + A +F M +
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIK-RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQ 232
C P+ YN LI KAK + + + F++M +G+ N VTYN L++ Q
Sbjct: 390 DCFPNVVTYNTLIKGFC----KAKRVEEGMELFREMSQRGL---VGNTVTYNTLIQGLFQ 442
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
A + D +FK++ + PDI TY+ ++D K G +++ V ++ ++ +PDI T
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N++I+ K + +F SL KP + + +MI + + L+ +A+ +F++M
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 353 AMKYTPSFITYECII 367
P+ TY +I
Sbjct: 563 EDGTLPNSGTYNTLI 577
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 125/282 (44%), Gaps = 13/282 (4%)
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L A+ F +M R P+IV +N LL A A+ D V +L + + ++ D+Y+YN
Sbjct: 61 LDDAVDLFGEMV-QSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY--GKR--QAFDKMEQVFKS 315
+++ + + + +VL +M +PDI+T + L++ Y GKR +A ++Q+F
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV- 178
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC-- 373
+ +P TFN++I +A + +M A P TY ++ G C
Sbjct: 179 ---MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN--GLCKR 233
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
++ A + ++ K + V +++A C +A LF N G+ P+ TY
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
L + +LL M + I PN F ++ F
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 335
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 40/200 (20%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + K+ + + +E+FR M QR + +T Y+ LI + + G +A +F +M +
Sbjct: 401 LIKGFCKAKRVEEGMELFREMS-QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD 459
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQK-------------MKGM-------- 213
G PD Y+ L+ KAL Y QK ++GM
Sbjct: 460 GVPPDIITYSILLDGLCKYGKLEKALV-VFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Query: 214 ----------ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ KPN++ Y ++ + ++ +ALF+E+ E P+ TYN ++
Sbjct: 519 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR 578
Query: 264 AYGKNG-------MIKEMES 276
A ++G +IKEM S
Sbjct: 579 ARLRDGDKAASAELIKEMRS 598
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 158/347 (45%), Gaps = 15/347 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + K G+ A EM +SGC PD Y +L+ A +A AL
Sbjct: 640 YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALC----RASRTDDALQLV 695
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++K P+ VTYNIL+ ++ +Q + +E+ PD+ TYN ++D+ K
Sbjct: 696 SELKSFGW-DPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCK 754
Query: 268 NGMIKE---MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK-- 322
G ++E + +S S C P+++T+++LI+ K D+ ++ + +M
Sbjct: 755 AGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVL 814
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKM--TAMKYTPSFITYECIITMYGYCDNVSRAR 380
P + T+NS + K + +A + + + +++ +P +T+ +I C A
Sbjct: 815 PNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEAC 874
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+FD++ G V T N ++ C A + E+ + GVTPD TY +L A+
Sbjct: 875 NVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAF 934
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSA 487
KA+ + +LL M G PN F ++ S QSG A
Sbjct: 935 CKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKS---DQSGEA 978
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 161/374 (43%), Gaps = 37/374 (9%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH----------------- 190
++K + ++ K G A+ LF CRP+ Y+ L+ A
Sbjct: 114 FNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFFRRI 173
Query: 191 -------------LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
L + +A A+AL F+ + P IVTYN ++ ++ +
Sbjct: 174 RSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELG 233
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
LF+EL E PD+ TYN ++D+ K G ++E + M S C P+++T+++LI
Sbjct: 234 AGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLI 293
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEK--PTLPTFNSMIINYGKARLQGKAEYVFQKM--TA 353
+ K D+ ++ + + P + T+NS + K + +A + + + +
Sbjct: 294 NGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGS 353
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
++ +P +T+ +I C + A +FD++ G V T NA++ C
Sbjct: 354 LRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMER 413
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
A + E+ + GVTPD TY +L A+ KA+ + +LL M G PN F ++
Sbjct: 414 AHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIID 473
Query: 474 TFSSSLAGSQSGSA 487
S +SG A
Sbjct: 474 GLCKS---DRSGEA 484
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 177/422 (41%), Gaps = 54/422 (12%)
Query: 78 ESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQK 137
E++EL++ + R D P + T N + + L K + E+ R ++
Sbjct: 304 EARELIQEMTRKSCDVLPNIITYNSF------------LDGLCKQSMTAEACELMRSLRD 351
Query: 138 QRWYIA-DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
++ DT +S LI + K GQ A +F +M G P+ YNAL+ K
Sbjct: 352 GSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLC----K 407
Query: 197 AKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
A + +A + M KG+ P+++TY++L+ A +A VD+ L + P+
Sbjct: 408 ADKMERAHAMIESMVDKGV---TPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPN 464
Query: 255 IYTYNGVMDAYG-----------------KNGMIKE-------MESVLSRMKSNQCK--- 287
+ T+N ++D K+G++ + ++ + ++ Q +
Sbjct: 465 VVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALL 524
Query: 288 -----PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
PD FN I+ K + QV+ ++ + P TFN +I KA
Sbjct: 525 DAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFE 584
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
+A +F++M A P +T+ +I V AR+I D + LG V T NA++
Sbjct: 585 QASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALV 644
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
C +G EA E + G PDS TY L A +A+ + +L+ ++ G
Sbjct: 645 HGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWD 704
Query: 463 PN 464
P+
Sbjct: 705 PD 706
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 159/357 (44%), Gaps = 18/357 (5%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ + L KSD+ + ++F M + + D Y LI + + G+ A L M
Sbjct: 471 IIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAM--- 527
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
PDP Y ++ K +++AL + +M +E P+ VT+NIL+ +A
Sbjct: 528 ---PDPDTYA--FNCCINGLSKLGDVSRALQVYNRMLELEL-VPDKVTFNILIAGACKAG 581
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
N +Q +ALF+E+ L PD+ T+ ++D K G ++ +L M + P+++T+N
Sbjct: 582 NFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYN 641
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
L+ K ++ Q + ++ S P T+ S++ +A A + ++ +
Sbjct: 642 ALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSF 701
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ P +TY ++ +A + +E+ G V T N ++++ C G EA
Sbjct: 702 GWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEA 761
Query: 415 DLLFENSH---NMGVTPDSSTYKLLYKAYTKAN----MKELVQKLLKRMEQNGIVPN 464
L + + P+ TY +L K +EL+Q+++++ ++PN
Sbjct: 762 RRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRK--SCDVLPN 816
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 149/372 (40%), Gaps = 61/372 (16%)
Query: 78 ESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQK 137
E++EL++ +MR D P + T N + + L K + E+ R ++
Sbjct: 798 EARELIQEMMRKSCDVLPNIITYNSF------------LDGLCKQSMMAEACELMRSLRD 845
Query: 138 QRWYIA-DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
++ DT +S LI + K GQT A +F +M
Sbjct: 846 GSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDM------------------------- 880
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
A GY PN+VTYN+L+ + +++ +A+ + + + + PD+
Sbjct: 881 -----IAGGYV----------PNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVI 925
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TY+ ++DA+ K + E +L M S C P+++TFN +ID K + Q+F +
Sbjct: 926 TYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDM 985
Query: 317 -MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
+ P T+ ++I + G+AE + M P + C I +
Sbjct: 986 TLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMP----DPDTYAFNCCINGLSKLGD 1041
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
VSRA EL + + T N ++ C G +A LFE + PD T+
Sbjct: 1042 VSRALHRMLELELVPDKV---TFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGA 1098
Query: 436 LYKAYTKANMKE 447
L KA E
Sbjct: 1099 LIDGLCKAGQVE 1110
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 141/337 (41%), Gaps = 21/337 (6%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSV--YNALITAHLHTRDK 196
R + + YS LI + K G+ A L EM C P++ YN+ + K
Sbjct: 774 RCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLC----K 829
Query: 197 AKALAKALGYFQKMK-GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
+A+A + ++ G R P+ VT++ L+ + D+ +F ++ P++
Sbjct: 830 QSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNV 889
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
TYN +M+ K ++ +++ M PD+IT+++L+D++ K D+ ++
Sbjct: 890 VTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHG 949
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY--TPSFITYECIITMYGYC 373
+ P + TFNS+I K+ G+A +F MT +K+ P ITY +I
Sbjct: 950 MASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMT-LKHGLAPDKITYCTLIDGLFRT 1008
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL--LFENSHNMGVTPDSS 431
+A + D + D N C+NGL D+ + + PD
Sbjct: 1009 GWAGQAEVLLDAM----PDPDTYAFNC-----CINGLSKLGDVSRALHRMLELELVPDKV 1059
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
T+ +L KA E L + M + P+ F
Sbjct: 1060 TFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTF 1096
>gi|125537564|gb|EAY84052.1| hypothetical protein OsI_39281 [Oryza sativa Indica Group]
Length = 762
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 162/372 (43%), Gaps = 47/372 (12%)
Query: 99 TLNKYVKVVRSEHC-------FLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKL 151
T+ K + + S HC + G+++ + ++VF MQK Y D Y L
Sbjct: 384 TMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYLREAVKVFEEMQKA-GYEPDRVTYCTL 442
Query: 152 IAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK 211
I + K G +AM L++ M+ G PD Y+A++ K LA A F +M
Sbjct: 443 IDIHAKGGYLEVAMDLYTRMQEVGLSPDTFTYSAMVNC----LGKGGHLAAAYKLFCEMV 498
Query: 212 GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMI 271
C PN+VTYNI++ A+ARN + V L+K++ + PD TY+ VM+ G G +
Sbjct: 499 -ENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHL 557
Query: 272 KEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM 331
E E+V M+ + PD + LL+D +GK DK + +++ +P +PT NS+
Sbjct: 558 DEAEAVFIEMRHDWA-PDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSL 616
Query: 332 IINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT-------MYGYC----------- 373
+ + K A V Q M A PS TY +++ G C
Sbjct: 617 LSAFLKINRFQDAYSVLQNMLAQGLVPSLQTYTLLLSCCTEAQAQMGLCCQLMAITGHPA 676
Query: 374 --------------DNV-SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
NV R D + ++ K ++A+++ +GL EA ++
Sbjct: 677 HMFLLYLPDAEPGGQNVRDHTRYFLDMMHSEDRESKRGLMDAVIDFLHKSGLKEEAGFIW 736
Query: 419 ENSHNMGVTPDS 430
E + V PDS
Sbjct: 737 EVAAQRNVYPDS 748
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 154/320 (48%), Gaps = 10/320 (3%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L F+W+++Q + D Y+ +I ++G+ Q L EM + C+P YN +I
Sbjct: 350 LGFFQWLKRQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRII- 408
Query: 189 AHLHTRDKAKALAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
H +A L +A+ F++M+ G E P+ VTY L+ A+ ++ L+ +
Sbjct: 409 ---HAYGRANYLREAVKVFEEMQKAGYE---PDRVTYCTLIDIHAKGGYLEVAMDLYTRM 462
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
E L+PD +TY+ +++ GK G + + M N C P+++T+N++I K + +
Sbjct: 463 QEVGLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNY 522
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ + +++K + + +P T++ ++ G +AE VF +M + P Y +
Sbjct: 523 ENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR-HDWAPDEPVYGLL 581
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
+ ++G NV +A + + + G V T N++L A+ +A + +N G+
Sbjct: 582 VDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGL 641
Query: 427 TPDSSTYKLLYKAYTKANMK 446
P TY LL T+A +
Sbjct: 642 VPSLQTYTLLLSCCTEAQAQ 661
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 122/270 (45%), Gaps = 17/270 (6%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
ALG+FQ +K K + +Y ++ QAR + L E++ P + TYN ++
Sbjct: 349 ALGFFQWLKRQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRII 408
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
AYG+ ++E V M+ +PD +T+ LID + K + ++ +
Sbjct: 409 HAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEVAMDLYTRMQEVGLS 468
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P T+++M+ GK A +F +M TP+ +TY +I + ++AR
Sbjct: 469 PDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQ------AKARN- 521
Query: 383 FDELSKLGKDMKVS-------TLNAMLEAYCMNGLPTEADLLF-ENSHNMGVTPDSSTYK 434
++ + KL KDM+V+ T + ++E G EA+ +F E H+ PD Y
Sbjct: 522 YENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRHDW--APDEPVYG 579
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
LL + KA + M Q+G+ PN
Sbjct: 580 LLVDLWGKAGNVDKALGWYHAMLQDGLQPN 609
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%)
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
K D ++ +I G+ + F M ++ + KPT+ T+N +I YG+A +A
Sbjct: 363 KHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYLREAVK 422
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
VF++M Y P +TY +I ++ + A +++ + ++G T +AM+
Sbjct: 423 VFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEVAMDLYTRMQEVGLSPDTFTYSAMVNCLG 482
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
G A LF G TP+ TY ++ KA E V KL K M+ G P+K
Sbjct: 483 KGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKI 542
Query: 467 FFLEALETFS 476
+ +E
Sbjct: 543 TYSIVMEVLG 552
>gi|326490553|dbj|BAJ84940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 856
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 154/318 (48%), Gaps = 6/318 (1%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L F W+++Q + D Y+ +I ++G+ Q L EM + C+P YN +I
Sbjct: 347 LGFFHWLKRQPGFKHDGHTYTTMIGILGQAKQFGTMRKLLDEMSSVNCKPTVVTYNRII- 405
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
H +A L +A+ F++M+G +P+ VTY L+ A++ ++ L+ + E
Sbjct: 406 ---HAYGRANYLREAVKVFEEMEGAGY-QPDRVTYCTLIDIHAKSGYLEVAMDLYGRMQE 461
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
L+PD +TY+ +++ GK G + + M N C P+++T+N++I K + +D
Sbjct: 462 VGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIDNGCTPNLVTYNIIIALQAKARNYDN 521
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+ ++++ + + +P T++ ++ G +AE VF +M + P Y ++
Sbjct: 522 VVKLYRDMQIAGFRPDKITYSIVMEVLGHCGHLDEAEAVFLEMR-RDWAPDEPVYGLLVD 580
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
++G NV +A + + + G V T N++L A+ +A + +N G+ P
Sbjct: 581 LWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKLNRFQDAYGVLQNMLAQGLVP 640
Query: 429 DSSTYKLLYKAYTKANMK 446
TY LL T A+ +
Sbjct: 641 SLQTYTLLLSCCTDAHAQ 658
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 154/349 (44%), Gaps = 40/349 (11%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ G+++ + ++VF M+ Y D Y LI + K G +AM L+ M+
Sbjct: 404 IIHAYGRANYLREAVKVFEEMEGAG-YQPDRVTYCTLIDIHAKSGYLEVAMDLYGRMQEV 462
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G PD Y+A++ K LA A F +M C PN+VTYNI++ A+AR
Sbjct: 463 GLSPDTFTYSAMVNC----LGKGGQLAAAYKLFCEMID-NGCTPNLVTYNIIIALQAKAR 517
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
N D V L++++ + PD TY+ VM+ G G + E E+V M+ + PD +
Sbjct: 518 NYDNVVKLYRDMQIAGFRPDKITYSIVMEVLGHCGHLDEAEAVFLEMRRDWA-PDEPVYG 576
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
LL+D +GK DK + +++ +P +PT NS++ + K A V Q M A
Sbjct: 577 LLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKLNRFQDAYGVLQNMLAQ 636
Query: 355 KYTPSFITYECIIT-------MYGYC-------------------------DNV-SRARE 381
PS TY +++ G C +NV AR
Sbjct: 637 GLVPSLQTYTLLLSCCTDAHAQMGLCCQLMAITGHPAHMFLLYLPDAEPGGENVRDHARY 696
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
D + ++ K ++A+++ +GL EA ++E + V PDS
Sbjct: 697 FLDMMHSEDRESKRGIMDAVIDFLHKSGLKEEAGFIWEVAAQRNVYPDS 745
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 119/270 (44%), Gaps = 17/270 (6%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
ALG+F +K K + TY ++ QA+ + L E+ P + TYN ++
Sbjct: 346 ALGFFHWLKRQPGFKHDGHTYTTMIGILGQAKQFGTMRKLLDEMSSVNCKPTVVTYNRII 405
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
AYG+ ++E V M+ +PD +T+ LID + K + ++ +
Sbjct: 406 HAYGRANYLREAVKVFEEMEGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLYGRMQEVGLS 465
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P T+++M+ GK A +F +M TP+ +TY II + ++AR
Sbjct: 466 PDTFTYSAMVNCLGKGGQLAAAYKLFCEMIDNGCTPNLVTYNIIIALQ------AKARN- 518
Query: 383 FDELSKLGKDMKVS-------TLNAMLEAYCMNGLPTEADLLF-ENSHNMGVTPDSSTYK 434
+D + KL +DM+++ T + ++E G EA+ +F E + PD Y
Sbjct: 519 YDNVVKLYRDMQIAGFRPDKITYSIVMEVLGHCGHLDEAEAVFLEMRRDW--APDEPVYG 576
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
LL + KA + M Q+G+ PN
Sbjct: 577 LLVDLWGKAGNVDKALGWYHAMLQDGLQPN 606
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%)
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
K D T+ +I G+ + F M ++ + KPT+ T+N +I YG+A +A
Sbjct: 360 KHDGHTYTTMIGILGQAKQFGTMRKLLDEMSSVNCKPTVVTYNRIIHAYGRANYLREAVK 419
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
VF++M Y P +TY +I ++ + A +++ + ++G T +AM+
Sbjct: 420 VFEEMEGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLG 479
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
G A LF + G TP+ TY ++ KA + V KL + M+ G P+K
Sbjct: 480 KGGQLAAAYKLFCEMIDNGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQIAGFRPDKI 539
Query: 467 FFLEALETFS 476
+ +E
Sbjct: 540 TYSIVMEVLG 549
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 150/321 (46%), Gaps = 9/321 (2%)
Query: 146 GIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT--AHLHTRDKAKALAKA 203
G++ L +V+ G A+ FS+M+ P N L+ A L D K
Sbjct: 61 GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR---- 116
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+F+ M G +P + TYNI++ + +V+ LF+E+ L PD TYN ++D
Sbjct: 117 --FFKDMIGA-GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMID 173
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+GK G + + MK C+PD+IT+N LI+ + K + ++ + + KP
Sbjct: 174 GFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKP 233
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ ++++++ + K + +A + M + P+ TY +I N+S A +
Sbjct: 234 NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLG 293
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+E+ ++G + V T A+++ C EA+ LF GV P+ ++Y L + KA
Sbjct: 294 NEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA 353
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+ +LL ++ GI P+
Sbjct: 354 KNMDRALELLNELKGRGIKPD 374
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 159/365 (43%), Gaps = 41/365 (11%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K R + DT Y+ +I GK G+ + F EM++ C PD YNALI K
Sbjct: 157 KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFC----K 212
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
L L ++++MKG KPN+V+Y+ L+ A + + Q + ++ L P+ Y
Sbjct: 213 FGKLPIGLEFYREMKG-NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEY 271
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TY ++DA K G + + + + M + +++T+ LID + + E++F +
Sbjct: 272 TYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM 331
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY------------- 363
+ P L ++N++I + KA+ +A + ++ P + Y
Sbjct: 332 DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKI 391
Query: 364 -----------EC-----------IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
EC ++ Y N + + DE+ +L ++ V T +
Sbjct: 392 EAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVL 451
Query: 402 LEAYCMNGLPTEA-DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
++ C N L ++A D S++ G+ +++ + + K N E L ++M Q G
Sbjct: 452 IDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKG 511
Query: 461 IVPNK 465
+VP++
Sbjct: 512 LVPDR 516
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 150/345 (43%), Gaps = 13/345 (3%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGI--YSKLIAVMGKKGQTRLAMWLFSEMRN 173
F +LGK+D +V R+ + A + Y+ +I M K+G A LF EM+
Sbjct: 105 FAKLGKTD------DVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 158
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G PD YN++I K L + +F++MK M C+P+++TYN L+ +
Sbjct: 159 RGLVPDTVTYNSMIDGF----GKVGRLDDTVCFFEEMKDM-CCEPDVITYNALINCFCKF 213
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ ++E+ + L P++ +Y+ ++DA+ K GM+++ M+ P+ T+
Sbjct: 214 GKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTY 273
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
LID+ K ++ ++ + + T+ ++I A +AE +F KM
Sbjct: 274 TSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDT 333
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P+ +Y +I + N+ RA E+ +EL G + + C
Sbjct: 334 AGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEA 393
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
A ++ G+ +S Y L AY K+ LL M++
Sbjct: 394 AKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKE 438
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 2/218 (0%)
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
++ P ++ + GM++E S+MK + P + N L+ + K D
Sbjct: 54 NVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDD 113
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+++ FK ++ + +PT+ T+N MI K A +F++M P +TY +I
Sbjct: 114 VKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMID 173
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG-LPTEADLLFENSHNMGVT 427
+G + F+E+ + + V T NA++ +C G LP + E N G+
Sbjct: 174 GFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGN-GLK 232
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
P+ +Y L A+ K M + K M + G+VPN+
Sbjct: 233 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNE 270
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 100/246 (40%)
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
C P ++ L +++ F ++ + P + NG++ + K G +++
Sbjct: 56 CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVK 115
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
M +P + T+N++ID K + +F+ + P T+NSMI +
Sbjct: 116 RFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 175
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
GK F++M M P ITY +I + + E + E+ G V
Sbjct: 176 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 235
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+ + +++A+C G+ +A + + +G+ P+ TY L A K +L
Sbjct: 236 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNE 295
Query: 456 MEQNGI 461
M Q G+
Sbjct: 296 MLQVGV 301
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 115/301 (38%), Gaps = 45/301 (14%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + + + A LF +M +G P+ + YNALI H KAK + +AL
Sbjct: 308 YTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALI----HGFVKAKNMDRALELL 363
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++KG KP+++ Y + ++ + E+ E + + Y +MDAY K
Sbjct: 364 NELKG-RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFK 422
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS-KEKPTLP 326
+G E +L MK + ++TF +LID K + K F + + +
Sbjct: 423 SGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAA 482
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS--------------------------- 359
F +MI K A +F++M P
Sbjct: 483 IFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM 542
Query: 360 --------FITYECIITMYGYCDNVSRAREIFDELSKLG----KDMKVSTLNAMLEAYCM 407
+ Y ++ +C+ + +AR +E+ G + + +S L E C+
Sbjct: 543 AEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCI 602
Query: 408 N 408
+
Sbjct: 603 D 603
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 80/210 (38%), Gaps = 12/210 (5%)
Query: 265 YGKNGMIKEMESVLSRMKS----------NQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
Y N ++KEM VLS+ N C P F+ L ++ Q F
Sbjct: 27 YDANSVLKEM--VLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFS 84
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
+ + P + N ++ + K + F+ M P+ TY +I
Sbjct: 85 KMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEG 144
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
+V AR +F+E+ G T N+M++ + G + FE +M PD TY
Sbjct: 145 DVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYN 204
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L + K + + + M+ NG+ PN
Sbjct: 205 ALINCFCKFGKLPIGLEFYREMKGNGLKPN 234
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 65/155 (41%), Gaps = 4/155 (2%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
A++ IY+ L+ K G + L EM+ + LI K K ++K
Sbjct: 408 ANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC----KNKLVSK 463
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A+ YF ++ + N + ++ + V+ LF+++ + L PD Y +M
Sbjct: 464 AVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLM 523
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
D K G + E ++ +M K D++ + L+
Sbjct: 524 DGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLV 558
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 158/336 (47%), Gaps = 16/336 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ L++ + K + A+ LF EM G PD Y+ +I + AL
Sbjct: 13 FNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMAL------- 65
Query: 208 QKMKGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
Q +K ME CKPN+V YN ++ + + R V + F E+ + + PD++TY+ ++ +
Sbjct: 66 QLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGF 125
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
G + E S+ +M P+ +TF +LID K++ + VF+++ +P +
Sbjct: 126 CNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDV 185
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIF 383
T+N+++ Y +A+ +F M P+ +Y +I G+C + + A+ +
Sbjct: 186 YTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILIN--GHCKSGRIDEAKGLL 243
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
E+S + T + ++ +C G P EA L + + G+ P+ TY ++ K
Sbjct: 244 AEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKH 303
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFF---LEALETFS 476
+ +LLK M+++ I PN + +E + TF
Sbjct: 304 GHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFG 339
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 167/386 (43%), Gaps = 43/386 (11%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L K + +++F M K + D YS +I + K G T +A+ L +M
Sbjct: 16 LLSGLCSKAKIMDAVKLFDEMVKM-GHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEK 74
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM------------------------ 210
GC+P+ YN +I + K + + +A+ +F +M
Sbjct: 75 GCKPNVVAYNTIIDSLC----KDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGR 130
Query: 211 ---------KGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+ +ER PN VT+ IL+ + R + + +F+ + E L PD+YTYN
Sbjct: 131 VNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNA 190
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++D Y + E + + + M C P++ ++N+LI+ + K D+ + + + H
Sbjct: 191 LVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKS 250
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSR 378
P + T+++++ + + +A+ + ++M + P+ ITY I + G C ++
Sbjct: 251 LTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYS--IVLDGLCKHGHLDE 308
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A E+ + + + + ++E C G A LF N G+ P TY ++
Sbjct: 309 AFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMIS 368
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPN 464
K + +L + M NG +PN
Sbjct: 369 GLLKGGLSNEACELFREMAVNGCLPN 394
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 135/287 (47%), Gaps = 43/287 (14%)
Query: 217 KPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
+P +VT+N LL C++A+ +D V LF E+ + PD+ TY+ +++ K G
Sbjct: 7 QPTLVTFNTLLSGLCSKAKIMDAVK-LFDEMVKMGHEPDVITYSTIINGLCKMGNTTMAL 65
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGK----RQAFDKMEQVFK-----------SLMHS- 319
+L +M+ CKP+++ +N +IDS K +A D ++ K S++H
Sbjct: 66 QLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGF 125
Query: 320 ----------------KEKPTLP---TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
E+ +P TF +I K R+ +A VF+ MT P
Sbjct: 126 CNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDV 185
Query: 361 ITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA-DLL 417
TY ++ GYC + A+++F+ + + G V + N ++ +C +G EA LL
Sbjct: 186 YTYNALVD--GYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLL 243
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
E SH +TPD TY L + + + + Q+LLK M G++PN
Sbjct: 244 AEMSHK-SLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPN 289
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 162/386 (41%), Gaps = 18/386 (4%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ + L K + ++ F M K+ D YS ++ G+ A LF +M
Sbjct: 86 IIDSLCKDRLVTEAMDFFSEMVKE-GIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVER 144
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQ 232
P+ + LI K + +++A F+ M KG+E P++ TYN L+
Sbjct: 145 NVIPNKVTFTILIDGLC----KKRMISEAWLVFETMTEKGLE---PDVYTYNALVDGYCS 197
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+D+ LF + AP++ +YN +++ + K+G I E + +L+ M PDI T
Sbjct: 198 RSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFT 257
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
++ L+ + + + +++ K + P L T++ ++ K G + F+ +
Sbjct: 258 YSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCK---HGHLDEAFELLK 314
Query: 353 AM---KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
AM K P+ Y +I + ARE+F L G V T M+ G
Sbjct: 315 AMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGG 374
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF- 468
L EA LF G P+S TY ++ + + + +L++ M G + F
Sbjct: 375 LSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFR 434
Query: 469 -LEALETFSSSLAGSQSGSAKTDLTR 493
L LE+ ++ GS++ T+
Sbjct: 435 MLSDLESSDEIISQFMRGSSQDRKTK 460
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 4/218 (1%)
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
L P + T+N ++ I + + M +PD+IT++ +I+ K
Sbjct: 6 LQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMAL 65
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
Q+ K + KP + +N++I + K RL +A F +M P TY I ++
Sbjct: 66 QLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSI--LH 123
Query: 371 GYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
G+C+ V+ A +F ++ + T +++ C + +EA L+FE G+ P
Sbjct: 124 GFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEP 183
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
D TY L Y + + QKL M++ G PN R
Sbjct: 184 DVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVR 221
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 13/102 (12%)
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
KLG + T N +L C +A LF+ MG PD TY + K
Sbjct: 3 KLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTT 62
Query: 448 LVQKLLKRMEQNGIVPN-------------KRFFLEALETFS 476
+ +LLK+ME+ G PN R EA++ FS
Sbjct: 63 MALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFS 104
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 11/133 (8%)
Query: 351 MTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
M + P+ +T+ +++ G C + A ++FDE+ K+G + V T + ++ C
Sbjct: 1 MFKLGLQPTLVTFNTLLS--GLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKM 58
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G T A L + G P+ Y + + K + M + GI P+
Sbjct: 59 GNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPD---- 114
Query: 469 LEALETFSSSLAG 481
+ T+SS L G
Sbjct: 115 ---VFTYSSILHG 124
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 163/341 (47%), Gaps = 16/341 (4%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L + + M+K + AD IY+ +I + A+ LF+EM N G RP+ YN+LI
Sbjct: 224 LSLLKKMEKGKIE-ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 282
Query: 189 AHLHT---RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
+ D ++ L+ + + PN+VT++ L+ A + + + L+ E
Sbjct: 283 CLCNYGRWSDASRLLSDMIE--------RKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 334
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ + + PDI+TY+ +++ + + + E + + M S C P+++T+N LI + K +
Sbjct: 335 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 394
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
++ ++F+ + T+N++I +A A+ +F+KM + P ITY
Sbjct: 395 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS- 453
Query: 366 IITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
I + G C + +A +F+ L K + + T N M+E C G + LF +
Sbjct: 454 -ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 512
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
GV P+ Y + + + +KE L + M+++G +PN
Sbjct: 513 KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 553
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 140/319 (43%), Gaps = 44/319 (13%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH-LHTR-DKAKALAKALG 205
+S LI K+G+ A L+ EM PD Y++LI +H R D+AK +
Sbjct: 312 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM----- 366
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
F+ M + C PN+VTYN L++ +A+ V++ LF+E+ + L + TYN ++
Sbjct: 367 -FELMISKD-CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 424
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ G + + +M S+ PDIIT+++L+D K +K VF+ L SK +P +
Sbjct: 425 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 484
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+N MI KA GK E ++F
Sbjct: 485 YTYNIMIEGMCKA---GKVE--------------------------------DGWDLFCS 509
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
LS G V M+ +C GL EAD LF G P+S TY L +A +
Sbjct: 510 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGD 569
Query: 446 KELVQKLLKRMEQNGIVPN 464
K +L+K M G V +
Sbjct: 570 KAASAELIKEMRSCGFVGD 588
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 152/355 (42%), Gaps = 46/355 (12%)
Query: 148 YSKLIAVMGK-----------------------------------KGQTRLAMWLFSEMR 172
++KL++ + K + Q LA+ + +M
Sbjct: 67 FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMM 126
Query: 173 NSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
G PD ++L+ + H K +++A+ +M ME +PN VT+N L+
Sbjct: 127 KLGYEPDIVTLSSLLNGYCH----GKRISEAVALVDQMFVMEY-QPNTVTFNTLIHGLFL 181
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+ AL + PD++TY V++ K G I S+L +M+ + + D++
Sbjct: 182 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 241
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI---INYGKARLQGKAEYVFQ 349
+ +ID+ + + +F + + +P + T+NS+I NYG+ A +
Sbjct: 242 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR---WSDASRLLS 298
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
M K P+ +T+ +I + + A +++DE+ K D + T ++++ +CM+
Sbjct: 299 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 358
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA +FE + P+ TY L K + KA E +L + M Q G+V N
Sbjct: 359 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 413
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/384 (20%), Positives = 164/384 (42%), Gaps = 39/384 (10%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + K +K+ + + MQ R D Y+ LI ++ Q LA+ + +M
Sbjct: 70 LLSAIAKMNKFDLVISLGERMQNLRISY-DLYSYNILINCFCRRSQLPLALAVLGKMMKL 128
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKA-------------------LGYFQKMKGMER 215
G PD ++L+ + H + ++A+A G F K E
Sbjct: 129 GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEA 188
Query: 216 -----------CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
C+P++ TY ++ + ++D +L K++ + + D+ Y ++DA
Sbjct: 189 VALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDA 248
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ + ++ + M + +P+++T+N LI + ++ ++ K P
Sbjct: 249 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 308
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREI 382
+ TF+++I + K +AE ++ +M P TY +I G+C D + A+ +
Sbjct: 309 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN--GFCMHDRLDEAKHM 366
Query: 383 FDELSKLGKDM--KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
F+ + + KD V T N +++ +C E LF G+ ++ TY L +
Sbjct: 367 FELM--ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 424
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
+A ++ QK+ K+M +G+ P+
Sbjct: 425 FQAGDCDMAQKIFKKMVSDGVPPD 448
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 122/255 (47%), Gaps = 10/255 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + K K ++ +++ M K R D YS LI + A +F M +
Sbjct: 315 LIDAFVKEGKLVEAEKLYDEMIK-RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 373
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQ 232
C P+ YN LI KAK + + + F++M +G+ N VTYN L++ Q
Sbjct: 374 DCFPNVVTYNTLIKGFC----KAKRVEEGMELFREMSQRGL---VGNTVTYNTLIQGLFQ 426
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
A + D +FK++ + PDI TY+ ++D K G +++ V ++ ++ +PDI T
Sbjct: 427 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 486
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N++I+ K + +F SL KP + + +MI + + L+ +A+ +F++M
Sbjct: 487 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 546
Query: 353 AMKYTPSFITYECII 367
P+ TY +I
Sbjct: 547 EDGTLPNSGTYNTLI 561
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 125/282 (44%), Gaps = 13/282 (4%)
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L A+ F +M R P+IV +N LL A A+ D V +L + + ++ D+Y+YN
Sbjct: 45 LDDAVDLFGEMV-QSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY--GKR--QAFDKMEQVFKS 315
+++ + + + +VL +M +PDI+T + L++ Y GKR +A ++Q+F
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV- 162
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC-- 373
+ +P TFN++I +A + +M A P TY ++ G C
Sbjct: 163 ---MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN--GLCKR 217
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
++ A + ++ K + V +++A C +A LF N G+ P+ TY
Sbjct: 218 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 277
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
L + +LL M + I PN F ++ F
Sbjct: 278 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 319
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 47/213 (22%)
Query: 109 SEHCF-------LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQT 161
S+ CF L + K+ + + +E+FR M QR + +T Y+ LI + + G
Sbjct: 372 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS-QRGLVGNTVTYNTLIQGLFQAGDC 430
Query: 162 RLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQK------------ 209
+A +F +M + G PD Y+ L+ KAL Y QK
Sbjct: 431 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALV-VFEYLQKSKMEPDIYTYNI 489
Query: 210 -MKGM------------------ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
++GM + KPN++ Y ++ + ++ +ALF+E+ E
Sbjct: 490 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 549
Query: 251 LAPDIYTYNGVMDAYGKNG-------MIKEMES 276
P+ TYN ++ A ++G +IKEM S
Sbjct: 550 TLPNSGTYNTLIRARLRDGDKAASAELIKEMRS 582
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 155/338 (45%), Gaps = 11/338 (3%)
Query: 134 WMQKQRWY--IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
++++ R + + D IY+ +I + G A+ + EM GC PD YN L+
Sbjct: 3 YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLC 62
Query: 192 HTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
K + L A G +M+ ER P++ T+ L+ +D+ LF +
Sbjct: 63 ----KERRLLDAEGLLNEMR--ERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR 116
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
L PDI TYN ++D + G + + + M S + P+ +T+++LIDS+ ++ +
Sbjct: 117 LRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAF 176
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+++ P + T+NS+I Y ++ K + QKM K +P ITY +I Y
Sbjct: 177 GFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGY 236
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
D + A ++ + + K V T N ++ + ++G EA +FE G+ PD
Sbjct: 237 IKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDR 296
Query: 431 STYKLLYKAY-TKANMKELVQKLLKRMEQNGIVPNKRF 467
TY + + T N KE Q L M Q G P+ +F
Sbjct: 297 YTYMSMINGHVTAGNSKEAFQ-LHDEMLQRGFAPDDKF 333
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 142/314 (45%), Gaps = 17/314 (5%)
Query: 165 MWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYN 224
M EMR G PD +Y +I +A ++ AL +M G C P++VTYN
Sbjct: 1 MAYLREMRCFGLVPDGVIYTMVIGGFC----RAGLMSDALRVRDEMVGC-GCLPDVVTYN 55
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
LL + R + L E+ E + PD+ T+ ++ Y G + + + M +
Sbjct: 56 TLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQ 115
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK-PTLPTFNSMIINYGKARLQGK 343
+ +PDI+T+N LID ++ DK ++ MHS+E P T++ +I ++ + +G+
Sbjct: 116 RLRPDIVTYNTLIDGMCRQGDLDKANDLWDD-MHSREIFPNHVTYSILIDSHCE---KGQ 171
Query: 344 AEYVF---QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL--SKLGKDMKVSTL 398
E F +M P+ +TY II Y NVS+ ++ ++ +K+ D+ T
Sbjct: 172 VEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDL--ITY 229
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N ++ Y +A L V PD TY +L ++ + + ++M
Sbjct: 230 NTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCA 289
Query: 459 NGIVPNKRFFLEAL 472
GI P++ ++ +
Sbjct: 290 KGIEPDRYTYMSMI 303
>gi|449459510|ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
gi|449530101|ref|XP_004172035.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
Length = 680
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 164/343 (47%), Gaps = 6/343 (1%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
++ +W +F M +QR AD YS LI GK+G A+ +M D
Sbjct: 171 RAKQWELAHGLFDEM-RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDL 229
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
+Y+ LI D +KA++ F ++K P+IV YN ++ +A+ +
Sbjct: 230 VLYSNLIELSRKLCDYSKAIS----IFSRLK-RSGITPDIVAYNTMINVFGKAKLFREAR 284
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
L KE+ + PD +Y+ +++ + +N E SV+S MK C D+ T N++ID Y
Sbjct: 285 FLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVY 344
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
G+ + +++F + +P + ++N+++ YG+A L G+A ++F+ M + +
Sbjct: 345 GQLDMVKEADRLFWRMRKIGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNV 404
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
+TY +I +YG +A + ++ K G + T + ++ + G + +LF+
Sbjct: 405 VTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQK 464
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
+ G D Y+ + AY KA + ++LL ++Q +P
Sbjct: 465 LRSSGAEIDQVLYQTMIVAYEKAGLVGHAKRLLHELKQPDNIP 507
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 146/308 (47%), Gaps = 7/308 (2%)
Query: 134 WMQK--QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
W+QK Q D +YS LI + K A+ +FS ++ SG PD YN +I
Sbjct: 216 WLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNTMINVF- 274
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KAK +A ++M+ ++ P+ V+Y+ LL + + ++ E+ E
Sbjct: 275 ---GKAKLFREARFLLKEMRAVD-VMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNC 330
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
D+ T N ++D YG+ M+KE + + RM+ +P+++++N ++ YG+ + F +
Sbjct: 331 PLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKIGIEPNVVSYNTILRVYGEAELFGEAIH 390
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+F+ + + K + T+N+MI YGK KA + Q M P+ ITY II+++G
Sbjct: 391 LFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTIISIWG 450
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ R+ +F +L G ++ M+ AY GL A L P ++
Sbjct: 451 KAGKLDRSAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLVGHAKRLLHELKQPDNIPRTT 510
Query: 432 TYKLLYKA 439
+L KA
Sbjct: 511 AITILAKA 518
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 139/276 (50%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P++ YN++LR +A+ + + LF E+ + LA D YTY+ ++ +GK GM S
Sbjct: 157 PSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSW 216
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L +M+ ++ D++ ++ LI+ K + K +F L S P + +N+MI +GK
Sbjct: 217 LQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGK 276
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
A+L +A ++ ++M A+ P ++Y ++ M+ + A + E+ ++ + ++T
Sbjct: 277 AKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTT 336
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
N M++ Y + EAD LF +G+ P+ +Y + + Y +A + L + M+
Sbjct: 337 CNIMIDVYGQLDMVKEADRLFWRMRKIGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQ 396
Query: 458 QNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTR 493
+ I N + ++ + +L ++ + D+ +
Sbjct: 397 RKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQK 432
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 146/364 (40%), Gaps = 34/364 (9%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA-- 201
D Y+ +I V GK R A +L EMR PD Y+ L+ + +AL+
Sbjct: 263 DIVAYNTMINVFGKAKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALSVI 322
Query: 202 -------------------KALGYFQKMKGMER---------CKPNIVTYNILLRACAQA 233
G +K +R +PN+V+YN +LR +A
Sbjct: 323 SEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKIGIEPNVVSYNTILRVYGEA 382
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ LF+ + + ++ TYN ++ YGK ++ +++ M+ +P+ IT+
Sbjct: 383 ELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITY 442
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+ +I +GK D+ +F+ L S + + +MI+ Y KA L G A+ + ++
Sbjct: 443 STIISIWGKAGKLDRSAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLVGHAKRLLHELK- 501
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P I IT+ + A +F + G+ +S M++ + N
Sbjct: 502 ---QPDNIPRTTAITILAKAGRIEEATWVFRQAFDAGELKDISVFECMIDLFSRNKKHKN 558
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
+FE N+G P+S L+ AY K + L M++ G V + L
Sbjct: 559 VLEVFEKMRNVGHFPNSDVIALVLNAYGKLRDFDTADALYMEMQEEGCVFTDEVHFQMLS 618
Query: 474 TFSS 477
+ +
Sbjct: 619 LYGA 622
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 163/360 (45%), Gaps = 48/360 (13%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + K G TR A+ L ++ +P+ +YN +I A K + +++A G F
Sbjct: 167 YGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALC----KYQLVSEAYGLF 222
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M KG+ ++VTY L+ A + + L E+ + P++YTYN ++DA
Sbjct: 223 SEMTAKGIS---ADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G +KE ++VL+ M KPD+IT++ L+D Y K + VF ++ P +
Sbjct: 280 CKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDV 339
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIF 383
++ +I + K ++ +A +F++M P +TY +I G C + +S ++
Sbjct: 340 HSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID--GLCKSGRISYVWDLI 397
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL------- 436
DE+ G V T N++++ C NG A LF + G+ P S T+ +L
Sbjct: 398 DEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKG 457
Query: 437 ----------------------YK------AYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
YK + K + E +L +ME+NG VPN F
Sbjct: 458 GRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTF 517
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 150/356 (42%), Gaps = 50/356 (14%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ +I + K A LFSEM G D Y LI A L +A+G
Sbjct: 201 MYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFC----IASKLKEAIGL 256
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+M ++ PN+ TYNIL+ A + V + + + ++ + PD+ TY+ +MD Y
Sbjct: 257 LNEMV-LKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYF 315
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+K+ + V + M PD+ ++ +LI+ + K + D+ +FK + P +
Sbjct: 316 LVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIV 375
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECIITMYGYCDN-------- 375
T++S+I K+ G+ YV+ + M+ + ITY +I G C N
Sbjct: 376 TYSSLIDGLCKS---GRISYVWDLIDEMRDRGIPANVITYNSLID--GLCKNGHLDRAIA 430
Query: 376 -----------------------------VSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+ A+E F +L G + V N M+ +C
Sbjct: 431 LFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHC 490
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
GL EA + G P++ T+ ++ A K + + +KLL++M G++
Sbjct: 491 KQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGLL 546
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 145/328 (44%), Gaps = 9/328 (2%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+R Y T ++ LI + KGQ A+ ++ G + D Y LI D
Sbjct: 122 KRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTR 181
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
A+ +K+ G KPN+ YN ++ A + + V + LF E+ ++ D+ T
Sbjct: 182 GAIK----LVRKIDG-RLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVT 236
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y ++ + +KE +L+ M P++ T+N+L+D+ K + + V ++
Sbjct: 237 YTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVML 296
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN-- 375
+ KP + T+++++ Y KA++VF M+ M TP +Y +I G+C N
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILIN--GFCKNKM 354
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
V A +F E+ + + T +++++ C +G + L + + G+ + TY
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNS 414
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVP 463
L K + L +M+ GI P
Sbjct: 415 LIDGLCKNGHLDRAIALFNKMKDQGIRP 442
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 97/191 (50%), Gaps = 6/191 (3%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ L +F+ M Q+ + YS LI + K G+ L EMR+ G + YN+L
Sbjct: 357 EALNLFKEMH-QKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSL 415
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I K L +A+ F KMK + +P T+ ILL + + F++L
Sbjct: 416 IDGLC----KNGHLDRAIALFNKMKD-QGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDL 470
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
D+Y YN +++ + K G+++E ++LS+M+ N C P+ +TF+++I++ K+
Sbjct: 471 LTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDEN 530
Query: 307 DKMEQVFKSLM 317
DK E++ + ++
Sbjct: 531 DKAEKLLRQMI 541
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 145/366 (39%), Gaps = 83/366 (22%)
Query: 189 AHLHTRDKA-KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
+H H++ + + + A+ F +M M R P I+ +N +L + A+ ++ +L L
Sbjct: 28 SHFHSQPPSIQNVDDAVSQFNRMLCM-RHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLE 86
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
+ PD+ T N +++ + G I SVL+++ +P ITF LI + +
Sbjct: 87 LKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVN 146
Query: 308 --------------KMEQV-FKSLMHSK--------------------EKPTLPTFNSMI 332
K +QV + +L++ KP + +N++I
Sbjct: 147 KALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTII 206
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLG 390
K +L +A +F +MTA + +TY +I YG+C + A + +E+
Sbjct: 207 DALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLI--YGFCIASKLKEAIGLLNEMVLKT 264
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEA--------------DLL------------------- 417
+ V T N +++A C G EA D++
Sbjct: 265 INPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQ 324
Query: 418 --FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
F MGVTPD +Y +L + K M + L K M Q +VP + T+
Sbjct: 325 HVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVP-------GIVTY 377
Query: 476 SSSLAG 481
SS + G
Sbjct: 378 SSLIDG 383
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 156/354 (44%), Gaps = 44/354 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y ++ VM K GQT LAM L +M + D Y+ +I K +L A F
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC----KHGSLDNAFNLF 286
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M+ M+ NI+TYNIL+ A D L +++ + + P++ T++ ++D++ K
Sbjct: 287 NEME-MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK 345
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G ++E E + M PD IT+ LID + K DK Q+ ++ P + T
Sbjct: 346 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT 405
Query: 328 FNSMIINYGKAR---------------------------LQGKAEY--------VFQKMT 352
FN +I Y KA +QG E +FQ+M
Sbjct: 406 FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMV 465
Query: 353 AMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
+ K P+ +TY+ I + G CDN +A EIF+++ K ++ + N ++ C
Sbjct: 466 SRKVPPNIVTYK--ILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 523
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+A LF + GV P TY ++ K + L ++ME++G P+
Sbjct: 524 VDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPD 577
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 146/326 (44%), Gaps = 9/326 (2%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
Y +T +S LI + +G+ A+ L M G +PD N L+ + +A+A+
Sbjct: 154 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 213
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
KM C+PN VTY +L ++ L +++ E + D Y+
Sbjct: 214 L----LIDKMVEYG-CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++D K+G + ++ + M+ +IIT+N+LI + +D ++ + ++ K
Sbjct: 269 IIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSR 378
P + TF+ +I ++ K +AE + ++M P ITY +I G+C +++ +
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID--GFCKENHLDK 386
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A ++ D + G D + T N ++ YC + LF GV D+ TY L +
Sbjct: 387 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 446
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPN 464
+ + + ++L + M + PN
Sbjct: 447 GFCELGKLNVAKELFQEMVSRKVPPN 472
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 131/290 (45%), Gaps = 6/290 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + K K + E+ + M R DT Y+ LI K+ A + M +
Sbjct: 338 VLIDSFVKEGKLREAEELHKEMI-HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVS 396
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
GC P+ +N LI + KA + L F+KM + + VTYN L++ +
Sbjct: 397 KGCDPNIRTFNILINGYC----KANRIDDGLELFRKMS-LRGVVADTVTYNTLIQGFCEL 451
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
++ LF+E+ + P+I TY ++D NG ++ + +++ ++ + DI +
Sbjct: 452 GKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIY 511
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N++I D +F SL KP + T+N MI K +AE +F+KM
Sbjct: 512 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEE 571
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
+ P TY +I + + +++ ++ +EL + G + ST+ +++
Sbjct: 572 DGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 621
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 4/176 (2%)
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P +I F+ L + K + +D + + K + L T + MI + + R A
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 348 FQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
K+ + Y P+ IT+ +I G C VS A E+ D + ++G + T+N ++
Sbjct: 146 MGKIIKLGYEPNTITFSTLIN--GLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGL 203
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
C++G EA LL + G P++ TY + K+ L +LL++ME+ I
Sbjct: 204 CLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 115/258 (44%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P ++ ++ L A A+ + D V AL K++ +A ++YT + +++ + + + S
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
+ ++ +P+ ITF+ LI+ + ++ ++ KP L T N+++
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
+ + +A + KM P+ +TY ++ + + A E+ ++ + +
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
+ +++ C +G A LF G+T + TY +L + A + KLL+ M
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 458 QNGIVPNKRFFLEALETF 475
+ I PN F +++F
Sbjct: 326 KRKINPNVVTFSVLIDSF 343
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 135/318 (42%), Gaps = 17/318 (5%)
Query: 164 AMWLFSEMRNSGCRPDPSV--YNALITAHLHTR--DKAKALAKALGYFQKMKGMERCKPN 219
A+ LF +M +S RP P+V ++ L +A T+ D AL K + ++KG+ N
Sbjct: 72 AIDLFRDMIHS--RPLPTVIDFSRLFSAIAKTKQYDLVLALCKQM----ELKGIAH---N 122
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+ T +I++ + R + + ++ + P+ T++ +++ G + E ++
Sbjct: 123 LYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVD 182
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
RM KPD+IT N L++ + + ++ +P T+ ++ K+
Sbjct: 183 RMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSG 242
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVST 397
A + +KM + Y II G C + + A +F+E+ G + T
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIID--GLCKHGSLDNAFNLFNEMEMKGITTNIIT 300
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
N ++ +C G + L + + P+ T+ +L ++ K ++L K M
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI 360
Query: 458 QNGIVPNKRFFLEALETF 475
GI P+ + ++ F
Sbjct: 361 HRGIAPDTITYTSLIDGF 378
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 6/166 (3%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L + + + LE+F ++K + + D GIY+ +I M + A LF +
Sbjct: 478 ILLDGLCDNGESEKALEIFEKIEKSKMEL-DIGIYNIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G +P YN +I K L++A F+KM+ + P+ TYNIL+RA
Sbjct: 537 KGVKPGVKTYNIMIGGLC----KKGPLSEAELLFRKMEE-DGHAPDGWTYNILIRAHLGD 591
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+ + L +EL + D T V+D + K +LS
Sbjct: 592 GDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSFLDMLS 637
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 174/423 (41%), Gaps = 46/423 (10%)
Query: 81 ELVRVLMRS--FSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQ 138
+L++ +MR D + + + E FLLF+E+ K
Sbjct: 274 QLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM-----------------KM 316
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
D Y+ LI K G A WLF EMR+ GC P Y ALI A+L KAK
Sbjct: 317 VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYL----KAK 372
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL------------ 246
+ +A F +M C+PN VTY L+ +A N+ + ++ +L
Sbjct: 373 QVPQANDIFHRMVD-AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFY 431
Query: 247 ----HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
LAP++ TY ++D K + +L M S+ C+P+ I ++ LID + K
Sbjct: 432 FPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCK 491
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
D ++VF + P++ T+ S+I K A V +M TP+ +T
Sbjct: 492 AGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVT 551
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL---LFE 419
Y +I +A ++ + + G V T A+++ G + DL LF
Sbjct: 552 YTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL---GKAGKIDLSLDLFT 608
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSL 479
G +P+ TY++L A + + + LL M+Q + + A++ FS S
Sbjct: 609 QMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSF 668
Query: 480 AGS 482
S
Sbjct: 669 IAS 671
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 121/276 (43%), Gaps = 18/276 (6%)
Query: 207 FQKMKGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
FQ +K M R P+ TY+ ++ A V++ LF+E+ + PD+YTY ++D+
Sbjct: 273 FQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDS 332
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ K G+I++ + + M+S C P ++T+ LI +Y K + + +F ++ + +P
Sbjct: 333 FCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 392
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMK----------------YTPSFITYECIIT 368
T+ +++ KA KA V+ K+ P+ +TY ++
Sbjct: 393 DVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD 452
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
V A E+ D + G + +A+++ +C G A +F G P
Sbjct: 453 GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLP 512
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
TY L K +L K+L +M ++ PN
Sbjct: 513 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPN 548
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 152/380 (40%), Gaps = 69/380 (18%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
I + Y L++ KK Q + + M GC P+PS++N+L+ ++ + +D A A
Sbjct: 139 IPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYA-- 196
Query: 202 KALGYFQKMKGMER--CKPNIVTYNILLRA-CAQAR------------------------ 234
++ + M C P V YNI + + C Q +
Sbjct: 197 -----YKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVL 251
Query: 235 ---NV-------------DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
NV D+ L KE+ PD TY+ V+ +++ +
Sbjct: 252 NKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLF 311
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
MK PD+ T+ +LIDS+ K ++ + +F+ + PT+ T+ ++I Y KA
Sbjct: 312 QEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKA 371
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
+ +A +F +M P+ +TY ++ N+S+A E++ +L + T
Sbjct: 372 KQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL--------IGTS 423
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
++ ++D F + P+ TY L KA+ + +LL M
Sbjct: 424 DS-----------ADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 472
Query: 459 NGIVPNKRFFLEALETFSSS 478
+G PN + ++ F +
Sbjct: 473 SGCEPNHIVYDALIDGFCKA 492
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 119/321 (37%), Gaps = 73/321 (22%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG------- 269
+P+ VTYN L++ + A VD + KE+ ES D +T A K G
Sbjct: 37 RPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALD 96
Query: 270 MIK-------------------------EMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
MI+ E S L RM+ N C P+++T+ L+ + K++
Sbjct: 97 MIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKK 156
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
+++ +M P FNS++ +Y + A + +MT P ++ Y
Sbjct: 157 QLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYN 216
Query: 365 CIIT-------------------MYG--------------------YC--DNVSRAREIF 383
I +YG C +A ++
Sbjct: 217 IFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLI 276
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
E+ + G ST + ++ C +A LLF+ +GVTPD TY +L ++ KA
Sbjct: 277 KEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKA 336
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+ E Q L + M G P
Sbjct: 337 GLIEQAQWLFEEMRSVGCSPT 357
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 125/249 (50%), Gaps = 7/249 (2%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM--- 274
PN++T+N ++ + +++ + ++ P++ TYN ++D Y K G + +M
Sbjct: 228 PNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKA 287
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
+++L M N+ P+ +TFN+LID + K + +VF+ + KPT+ T+NS++
Sbjct: 288 DAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNG 347
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKD 392
+A+ + +M + P+ ITY +I GYC + ARE+FD + K G
Sbjct: 348 LCNEGKLNEAKVLLDEMLSSNLKPNVITYNALIN--GYCKKKLLEEARELFDNIGKQGLT 405
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
V T N +L YC G EA LL + G P++STY L + + E V+ L
Sbjct: 406 PNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNL 465
Query: 453 LKRMEQNGI 461
L M+ G+
Sbjct: 466 LNEMQCRGV 474
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 151/318 (47%), Gaps = 12/318 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ +I + K G+ A + +M+ G P+ YN LI + K + KA
Sbjct: 233 FNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGK-MYKADAIL 291
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M + PN VT+N+L+ + N+ +F+E+ L P + TYN +++
Sbjct: 292 KEMVE-NKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCN 350
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + E + +L M S+ KP++IT+N LI+ Y K++ ++ ++F ++ P + T
Sbjct: 351 EGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVIT 410
Query: 328 FNSMIINYGKARLQGKAE--YVFQKMTAMK-YTPSFITYECIITMYGYC--DNVSRAREI 382
FN+++ Y K GK E ++ QK+ K + P+ TY C+I G+C + + +
Sbjct: 411 FNTLLHGYCKF---GKMEEAFLLQKVMLEKGFLPNASTYNCLIV--GFCREGKMEEVKNL 465
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+E+ G T N ++ A+C P +A L + + G+ P TY +L Y
Sbjct: 466 LNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCM 525
Query: 443 ANMKELVQKLLKRMEQNG 460
L K+ME+ G
Sbjct: 526 EGNLRAALNLRKQMEKEG 543
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 147/319 (46%), Gaps = 21/319 (6%)
Query: 155 MGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME 214
MG+ G+ A + EM + P+ +N LI K + L+ AL F++M+ +
Sbjct: 278 MGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFC----KDENLSAALKVFEEMQS-Q 332
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
KP +VTYN L+ +++ L E+ S L P++ TYN +++ Y K +++E
Sbjct: 333 GLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEA 392
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF---KSLMHSKEKPTLPTFNSM 331
+ + P++ITFN L+ Y K F KME+ F K ++ P T+N +
Sbjct: 393 RELFDNIGKQGLTPNVITFNTLLHGYCK---FGKMEEAFLLQKVMLEKGFLPNASTYNCL 449
Query: 332 IINYGKARLQGKAEYV---FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
I+ + + +GK E V +M +TY +I+ + +A + DE+
Sbjct: 450 IVGFCR---EGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEM-- 504
Query: 389 LGKDMKVS--TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
L K +K S T N +L YCM G A L + G + TY +L + Y +
Sbjct: 505 LDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKL 564
Query: 447 ELVQKLLKRMEQNGIVPNK 465
E LL M + G++PN+
Sbjct: 565 EDANGLLNEMLEKGLIPNR 583
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 126/261 (48%), Gaps = 7/261 (2%)
Query: 209 KMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
K G R K ++++ N LL A + V ++KE+ ++P++ T+N V++ K
Sbjct: 184 KRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKV 243
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM---EQVFKSLMHSKEKPTL 325
G + + V+ MK P+++T+N LID Y K KM + + K ++ +K P
Sbjct: 244 GKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNS 303
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIF 383
TFN +I + K A VF++M + P+ +TY ++ G C+ ++ A+ +
Sbjct: 304 VTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVN--GLCNEGKLNEAKVLL 361
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
DE+ V T NA++ YC L EA LF+N G+TP+ T+ L Y K
Sbjct: 362 DEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKF 421
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
E L K M + G +PN
Sbjct: 422 GKMEEAFLLQKVMLEKGFLPN 442
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 135/293 (46%), Gaps = 13/293 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALG 205
++ LI K A+ +F EM++ G +P YN+L+ + ++AK L +
Sbjct: 306 FNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEML 365
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
KPN++TYN L+ + + +++ LF + + L P++ T+N ++ Y
Sbjct: 366 -------SSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGY 418
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G ++E + M P+ T+N LI + + ++++ + + K
Sbjct: 419 CKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADT 478
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIF 383
T+N +I + + + KA + +M PS +TY I + GYC N+ A +
Sbjct: 479 VTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYN--ILLNGYCMEGNLRAALNLR 536
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
++ K G+ V T N +++ YC G +A+ L G+ P+ +TY+++
Sbjct: 537 KQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEII 589
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 45/233 (19%)
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
K +++ N L+ + K F +E V+K ++ K P L TFN++I K KA
Sbjct: 192 KLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGD 251
Query: 347 VFQKMTAMKYTPSFITYECIITMY------------------------------------ 370
V M + P+ +TY +I Y
Sbjct: 252 VVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLID 311
Query: 371 GYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
G+C +N+S A ++F+E+ G V T N+++ C G EA +L + + + P
Sbjct: 312 GFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKP 371
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
+ TY L Y K + E ++L + + G+ PN + TF++ L G
Sbjct: 372 NVITYNALINGYCKKKLLEEARELFDNIGKQGLTPN-------VITFNTLLHG 417
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 5/136 (3%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
ADT Y+ LI+ +K + + A L EM + G +P YN L+ + + L
Sbjct: 476 ADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGN----LRA 531
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
AL ++M+ R N+VTYN+L++ + ++ N L E+ E L P+ TY +
Sbjct: 532 ALNLRKQMEKEGRW-ANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIK 590
Query: 263 DAYGKNGMIKEMESVL 278
+ + G + ++E L
Sbjct: 591 EEMMEKGFLPDIEGHL 606
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 77/159 (48%), Gaps = 5/159 (3%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
++ ++ + Y+ LI ++G+ L +EM+ G + D YN LI+A ++
Sbjct: 436 EKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPK 495
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
KA A+ + KG+ KP+ +TYNILL N+ L K++ + ++ T
Sbjct: 496 KA-ARLIDEMLD-KGL---KPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVT 550
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
YN ++ Y + G +++ +L+ M P+ T+ ++
Sbjct: 551 YNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEII 589
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 157/316 (49%), Gaps = 11/316 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + K G+TR A+ L + + +P+ +YN +I + K K + +A F
Sbjct: 193 YGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMC----KVKLVNEAFDLF 248
Query: 208 QKM--KGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
+M KG+ P++VTY+ L+ C + D ++ K + E+I PD+YT+N +++A
Sbjct: 249 SEMVSKGIS---PDVVTYSALISGFCILGKLKDAIDLFNKMILENI-KPDVYTFNILVNA 304
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ K+G +KE ++V M KP+ +T+N L+D Y + +K + +F ++ P
Sbjct: 305 FCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPD 364
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ +++ MI + K + +A +F++M P +TY +I +S A ++ D
Sbjct: 365 IQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVD 424
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
++ G + T N++L+A C +A L + G PD STY +L K ++
Sbjct: 425 QMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSG 484
Query: 445 MKELVQKLLKRMEQNG 460
E +K+ + + G
Sbjct: 485 KLEDARKVFEDLLVKG 500
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 160/356 (44%), Gaps = 46/356 (12%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ +I M K A LFSEM + G PD Y+ALI+ L A+
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFC----ILGKLKDAIDL 282
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F KM +E KP++ T+NIL+ A + + + +F + + + P+ TYN +MD Y
Sbjct: 283 FNKMI-LENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYC 341
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+ + +S+ + M PDI +++++I+ + K + FD+ +FK + P +
Sbjct: 342 LVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVV 401
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECI----------------- 366
T++S+I K+ G+ Y Q + M P+ TY I
Sbjct: 402 TYSSLIDGLSKS---GRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALL 458
Query: 367 ----------------ITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
I + G C + + AR++F++L G ++ V M++ +C+
Sbjct: 459 TKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVE 518
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
GL EA L + G PD+ TY+++ + K + ++ +KLL+ M G+ N
Sbjct: 519 GLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLN 574
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 156/346 (45%), Gaps = 13/346 (3%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
Y+ DT ++ L + KGQ + A ++ G D Y LI H K
Sbjct: 151 YVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLI----HGLCKVGET 206
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
AL Q++ G +PN+V YN ++ + + + V++ LF E+ ++PD+ TY+
Sbjct: 207 RAALDLLQRVDG-NLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSA 265
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ + G +K+ + ++M KPD+ TFN+L++++ K + + VF +M
Sbjct: 266 LISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQG 325
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
KP T+NS++ Y + KA+ +F M P +Y +I + A
Sbjct: 326 IKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAM 385
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+F E+ + V T +++++ +G + A L + H+ GV P+ TY + A
Sbjct: 386 NLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDAL 445
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG-SQSG 485
K + + LL + + G P+ + T+S + G QSG
Sbjct: 446 CKTHQVDKAIALLTKFKDKGFQPD-------ISTYSILIKGLCQSG 484
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 142/358 (39%), Gaps = 48/358 (13%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ LF+ + P +N ++ + + K+K L QKM+ KPN+V
Sbjct: 69 AVSLFNRLLRRNTTPPAFEFNKILGSLV----KSKHYHTVLYLSQKME-FRGIKPNLVNC 123
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYT-------------------------- 257
NIL+ Q + ++F ++ + PD T
Sbjct: 124 NILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVA 183
Query: 258 ---------YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
Y ++ K G + +L R+ N +P+++ +N +IDS K + ++
Sbjct: 184 LGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNE 243
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+F ++ P + T++++I + A +F KM P T+ ++
Sbjct: 244 AFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVN 303
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
+ + + +FD + K G T N++++ YC+ +A +F GV P
Sbjct: 304 AFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNP 363
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG-SQSG 485
D +Y ++ + K + L K M + I+P+ + T+SS + G S+SG
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPD-------VVTYSSLIDGLSKSG 414
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 106/254 (41%), Gaps = 12/254 (4%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
K N ++Y+ +VD +LF L P + +N ++ + K+ +
Sbjct: 47 KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+ +M+ KP+++ N+LI+ + + VF ++ P TF ++ + G
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTL--SKG 164
Query: 337 KARLQGKAEYVF---QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
L+G+ + F K+ A+ + I+Y +I +G C V R D L ++ ++
Sbjct: 165 LC-LKGQIQQAFLFHDKVVALGFHFDQISYGTLI--HGLC-KVGETRAALDLLQRVDGNL 220
Query: 394 ---KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
V N ++++ C L EA LF + G++PD TY L + +
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAI 280
Query: 451 KLLKRMEQNGIVPN 464
L +M I P+
Sbjct: 281 DLFNKMILENIKPD 294
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 89/228 (39%), Gaps = 13/228 (5%)
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+Y+ + N + + S+ +R+ P FN ++ S K + + + + + +
Sbjct: 52 SYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKM 111
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--D 374
KP L N +I + + L A VF K+ M Y P IT+ + G C
Sbjct: 112 EFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSK--GLCLKG 169
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA-DLLFENSHNMGVTPDSSTY 433
+ +A D++ LG + ++ C G A DLL N+ V P+ Y
Sbjct: 170 QIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNL-VQPNVVMY 228
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
+ + K + L M GI P+ + T+S+ ++G
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSKGISPD-------VVTYSALISG 269
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 150/321 (46%), Gaps = 9/321 (2%)
Query: 146 GIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT--AHLHTRDKAKALAKA 203
G++ L +V+ G A+ FS+M+ P N L+ A L D K
Sbjct: 193 GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR---- 248
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+F+ M G +P + TYNI++ + +V+ LF+E+ L PD TYN ++D
Sbjct: 249 --FFKDMIG-AGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMID 305
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+GK G + + MK C+PD+IT+N LI+ + K + ++ + + KP
Sbjct: 306 GFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKP 365
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ ++++++ + K + +A + M + P+ TY +I N+S A +
Sbjct: 366 NVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLG 425
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+E+ ++G + V T A+++ C EA+ LF GV P+ ++Y L + KA
Sbjct: 426 NEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA 485
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+ +LL ++ GI P+
Sbjct: 486 KNMDRALELLNELKGRGIKPD 506
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 158/367 (43%), Gaps = 45/367 (12%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K R + DT Y+ +I GK G+ + F EM++ C PD YNALI K
Sbjct: 289 KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFC----K 344
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
L L ++++MKG KPN+V+Y+ L+ A + + Q + ++ L P+ Y
Sbjct: 345 FGKLPIGLEFYREMKG-NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEY 403
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TY ++DA K G + + + + M + +++T+ LID + + E++F +
Sbjct: 404 TYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM 463
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD-- 374
+ P L ++N++I + KA+ +A + ++ P + Y I +G C
Sbjct: 464 DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI--WGLCSLE 521
Query: 375 -----------------------------------NVSRAREIFDELSKLGKDMKVSTLN 399
N + + DE+ +L ++ V T
Sbjct: 522 KIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFC 581
Query: 400 AMLEAYCMNGLPTEA-DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
+++ C N L ++A D S++ G+ +++ + + K N E L ++M Q
Sbjct: 582 VLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQ 641
Query: 459 NGIVPNK 465
G+VP++
Sbjct: 642 KGLVPDR 648
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 137/314 (43%), Gaps = 5/314 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I M K+G A LF EM+ G PD YN++I K L + +F
Sbjct: 265 YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF----GKVGRLDDTVCFF 320
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++MK M C+P+++TYN L+ + + ++E+ + L P++ +Y+ ++DA+ K
Sbjct: 321 EEMKDM-CCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCK 379
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
GM+++ M+ P+ T+ LID+ K ++ ++ + + T
Sbjct: 380 EGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVT 439
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ ++I A +AE +F KM P+ +Y +I + N+ RA E+ +EL
Sbjct: 440 YTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK 499
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G + + C A ++ G+ +S Y L AY K+
Sbjct: 500 GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPT 559
Query: 448 LVQKLLKRMEQNGI 461
LL M++ I
Sbjct: 560 EGLHLLDEMKELDI 573
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 2/218 (0%)
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
++ P ++ + GM++E S+MK + P + N L+ + K D
Sbjct: 186 NVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDD 245
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+++ FK ++ + +PT+ T+N MI K A +F++M P +TY +I
Sbjct: 246 VKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMID 305
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG-LPTEADLLFENSHNMGVT 427
+G + F+E+ + + V T NA++ +C G LP + E N G+
Sbjct: 306 GFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGN-GLK 364
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
P+ +Y L A+ K M + K M + G+VPN+
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNE 402
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 100/246 (40%)
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
C P ++ L +++ F ++ + P + NG++ + K G +++
Sbjct: 188 CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVK 247
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
M +P + T+N++ID K + +F+ + P T+NSMI +
Sbjct: 248 RFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 307
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
GK F++M M P ITY +I + + E + E+ G V
Sbjct: 308 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 367
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+ + +++A+C G+ +A + + +G+ P+ TY L A K +L
Sbjct: 368 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNE 427
Query: 456 MEQNGI 461
M Q G+
Sbjct: 428 MLQVGV 433
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 115/301 (38%), Gaps = 45/301 (14%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + + + A LF +M +G P+ + YNALI H KAK + +AL
Sbjct: 440 YTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALI----HGFVKAKNMDRALELL 495
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++KG KP+++ Y + ++ + E+ E + + Y +MDAY K
Sbjct: 496 NELKG-RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFK 554
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS-KEKPTLP 326
+G E +L MK + ++TF +LID K + K F + + +
Sbjct: 555 SGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAA 614
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS--------------------------- 359
F +MI K A +F++M P
Sbjct: 615 IFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM 674
Query: 360 --------FITYECIITMYGYCDNVSRAREIFDELSKLG----KDMKVSTLNAMLEAYCM 407
+ Y ++ +C+ + +AR +E+ G + + +S L E C+
Sbjct: 675 AEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCI 734
Query: 408 N 408
+
Sbjct: 735 D 735
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 89/239 (37%), Gaps = 12/239 (5%)
Query: 265 YGKNGMIKEMESVLSRMKS----------NQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
Y N ++KEM VLS+ N C P F+ L ++ Q F
Sbjct: 159 YDANSVLKEM--VLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFS 216
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
+ + P + N ++ + K + F+ M P+ TY +I
Sbjct: 217 KMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEG 276
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
+V AR +F+E+ G T N+M++ + G + FE +M PD TY
Sbjct: 277 DVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYN 336
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTR 493
L + K + + + M+ NG+ PN + ++ F Q+ D+ R
Sbjct: 337 ALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRR 395
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 65/155 (41%), Gaps = 4/155 (2%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
A++ IY+ L+ K G + L EM+ + LI K K ++K
Sbjct: 540 ANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLC----KNKLVSK 595
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A+ YF ++ + N + ++ + V+ LF+++ + L PD Y +M
Sbjct: 596 AVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLM 655
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
D K G + E ++ +M K D++ + L+
Sbjct: 656 DGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLV 690
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 165/367 (44%), Gaps = 12/367 (3%)
Query: 106 VVRSEHCF-LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLA 164
+V + HCF +L K + + VF MQ Q D YS LI+ + G+ A
Sbjct: 435 IVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVR-PDVVTYSTLISAFCRMGRLADA 493
Query: 165 MWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYN 224
M FS+M + G P+ VY++LI D KA K L KG+ R PNIV ++
Sbjct: 494 MEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKA--KELVSEMMSKGIPR--PNIVFFS 549
Query: 225 ILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
++ + C + R +D + +H P I T+N ++D Y G +++ VL M S
Sbjct: 550 SIIHSLCNEGRVMDAHDVFNLVIHIGD-RPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVS 608
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+PD++T+N L+ Y K D +F+ ++H K KPT T++ ++ A
Sbjct: 609 VGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSA 668
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAM 401
A+ +F +M TY+ I + G C N A +F +L + ++ LN +
Sbjct: 669 AKKMFHEMIDSGTAVDIDTYK--ILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTV 726
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ A EA+ LF G+ P+ STY ++ K E + ME++G
Sbjct: 727 INALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGC 786
Query: 462 VPNKRFF 468
P+ R
Sbjct: 787 APSSRLL 793
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 138/310 (44%), Gaps = 5/310 (1%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM-KGMERCKPNIVTYNI 225
L M + GC P+ YN +I + L +++ +AL Q+M K RC P++V++N
Sbjct: 214 LLHRMSDLGCVPNAISYNTVIKS-LCGDSRSQ---EALDMVQRMAKEGGRCSPDVVSFNT 269
Query: 226 LLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ 285
++ + V + L E+ + + PD+ TYN ++DA K + + E VL +M
Sbjct: 270 VIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKG 329
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
+PD +T+ +I Y + + ++F+ + P + TFNS + + K AE
Sbjct: 330 VEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAE 389
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+FQ MT + P ++Y ++ Y + +F ++ G N ++ A+
Sbjct: 390 EIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAH 449
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
G+ EA L+F GV PD TY L A+ + + +M G+ PN
Sbjct: 450 AKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNT 509
Query: 466 RFFLEALETF 475
+ + F
Sbjct: 510 VVYHSLIHGF 519
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 154/334 (46%), Gaps = 20/334 (5%)
Query: 79 SKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQ 138
+ E V VL+ SD + ++ Y V++S L + + L++ + M K+
Sbjct: 207 TDEAVDVLLHRMSDLGCVPNAIS-YNTVIKS---------LCGDSRSQEALDMVQRMAKE 256
Query: 139 RWYIA-DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+ D ++ +I K+G+ A L +EM G PD YN+++ A KA
Sbjct: 257 GGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALC----KA 312
Query: 198 KALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
+A+ KA ++M KG+E P+ +TY ++ + + + + +F+++ L P I
Sbjct: 313 RAMDKAELVLRQMVDKGVE---PDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGI 369
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
T+N M + K+G K+ E + M + PD++++++L+ Y F M +F S
Sbjct: 370 VTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHS 429
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
+ FN +I + K + +A VF +M P +TY +I+ +
Sbjct: 430 MADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGR 489
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
++ A E F ++ +G + ++++ +CM+G
Sbjct: 490 LADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHG 523
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 84/193 (43%), Gaps = 9/193 (4%)
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA-EYVFQK 350
T+ +L+D + + D F L+ + + N+ + A+ +A + + +
Sbjct: 158 TYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHR 217
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM-----KVSTLNAMLEAY 405
M+ + P+ I+Y +I C + SR++E D + ++ K+ V + N ++ +
Sbjct: 218 MSDLGCVPNAISYNTVIK--SLCGD-SRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGF 274
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
G ++A L GV PD TY + A KA + + +L++M G+ P+
Sbjct: 275 FKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDG 334
Query: 466 RFFLEALETFSSS 478
+ + +S S
Sbjct: 335 LTYTAIIHGYSCS 347
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 150/333 (45%), Gaps = 20/333 (6%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
+ +I D YS LI + G AM +F E G + +YN L+ K
Sbjct: 350 KGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLV----------K 399
Query: 199 ALAK---ALGYFQKMKGM--ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP 253
L+K L Q MK M C P+I TYN+++ + + N + + P
Sbjct: 400 GLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIP 459
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
DI+T+N ++D Y K + + +L M S+ PD+IT+N L++ K + D + F
Sbjct: 460 DIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTF 519
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
K+++ P + T+N +I ++ K R +A +F++M TP +T +I G C
Sbjct: 520 KAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLIC--GLC 577
Query: 374 DN--VSRAREIFDELSKLGK-DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
N + +A E+F + K K + N M+ A+C + A+ LF PD+
Sbjct: 578 SNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDN 637
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
TY+++ +Y K +L L G+VP
Sbjct: 638 YTYRVMIDSYCKTGNIDLAHTFLLENISKGLVP 670
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 169/405 (41%), Gaps = 42/405 (10%)
Query: 71 GRKSEELESKELVRVLMR-SFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCL 129
GRK + +E V V R F D EP V++ N + ++ +
Sbjct: 87 GRKGK---VQEAVNVFERMDFYDCEPSVQSYNAIMNIL---------------------V 122
Query: 130 EVFRWMQKQRWYI--ADTGIYSKL------IAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
E + Q + Y+ D GIY + + G+ A+ L + M GC +
Sbjct: 123 EYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAV 182
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
Y A+I+ K +A F +M C P+I+T+N L+ + NV +
Sbjct: 183 SYCAVISGFY----KENCQIEAYHLFDEMLKQGIC-PDILTFNKLIHVLCKKGNVQESEK 237
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
LF ++ + + P+++T+N + + G I E +L + S PD+I++N LI +
Sbjct: 238 LFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFC 297
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
K + E +++S +P T+N++I + KA + A+ + + + P
Sbjct: 298 KHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEF 357
Query: 362 TYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
TY +I G C+ +++RA +F E + G + N +++ GL +A L +
Sbjct: 358 TYSSLIN--GLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMK 415
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ G +PD TY L+ K +L G +P+
Sbjct: 416 DMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPD 460
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 138/317 (43%), Gaps = 5/317 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y +I+ K+ A LF EM G PD +N LI H K + ++ F
Sbjct: 184 YCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLI----HVLCKKGNVQESEKLF 239
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K+ C PN+ T+NI ++ + +D+ L + + L PD+ +YN ++ + K
Sbjct: 240 SKVMKRGVC-PNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCK 298
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ + E E L +M ++ +P+ T+N +I+ + K +++ + M P T
Sbjct: 299 HSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFT 358
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
++S+I +A VF + + S I Y ++ V +A ++ ++
Sbjct: 359 YSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMM 418
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ G + T N ++ C G ++A+ + ++ G PD T+ L Y K +
Sbjct: 419 EHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMD 478
Query: 448 LVQKLLKRMEQNGIVPN 464
++L M +GI P+
Sbjct: 479 KAIEILDTMLSHGITPD 495
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 157/366 (42%), Gaps = 10/366 (2%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
K + ++ +F M KQ D ++KLI V+ KKG + + LFS++ G P+
Sbjct: 193 KENCQIEAYHLFDEMLKQ-GICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNL 251
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
+N I + A+ +A + + E P++++YN L+ + + +
Sbjct: 252 FTFNIFIQGLC----RKGAIDEAARLLESIVS-EGLTPDVISYNTLICGFCKHSKLVEAE 306
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
++ S + P+ +TYN +++ + K GM++ + +L PD T++ LI+
Sbjct: 307 CYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGL 366
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
++ VF M K ++ +N+++ K L +A + + M +P
Sbjct: 367 CNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDI 426
Query: 361 ITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
TY ++ G C +S A I ++ G + T N +++ YC +A +
Sbjct: 427 WTYNLVVN--GLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEIL 484
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ + G+TPD TY L KA + V K M + G PN + +E+F
Sbjct: 485 DTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKD 544
Query: 479 LAGSQS 484
S++
Sbjct: 545 RKVSEA 550
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 140/342 (40%), Gaps = 7/342 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + L K LQ L++ + M + D Y+ ++ + K G A + ++
Sbjct: 397 LVKGLSKQGLVLQALQLMKDMMEHGCS-PDIWTYNLVVNGLCKMGCLSDANGILNDAIAK 455
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC PD +N LI + R+ + KA+ M P+++TYN LL +AR
Sbjct: 456 GCIPDIFTFNTLIDGYCKQRN----MDKAIEILDTMLS-HGITPDVITYNTLLNGLCKAR 510
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+D V FK + E P+I TYN +++++ K+ + E + MK+ PDI+T
Sbjct: 511 KLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLC 570
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHS-KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
LI DK ++F ++ K + FN MI + AE +F KM
Sbjct: 571 TLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGG 630
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P TY +I Y N+ A E G +T +L C+ +E
Sbjct: 631 SDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSE 690
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
A ++ G+ P+ A K +V+ LLK+
Sbjct: 691 AVVIINLMVQNGIVPEEVNSIFEADKKEVAAPKIVVEYLLKK 732
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 165/399 (41%), Gaps = 34/399 (8%)
Query: 97 VRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMG 156
V+T + + + + C + E+LG K+ +V M+K G+Y ++ G
Sbjct: 30 VKTEDGFKHTLETYKC--MIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYG 87
Query: 157 KKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT----------AH-LHTRDKAKAL----- 200
+KG+ + A+ +F M C P YNA++ AH ++ R K +
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVY 147
Query: 201 ---------------AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
AL M G + C+ N V+Y ++ + + LF E
Sbjct: 148 THTIRMKSFCITGRPTAALRLLNNMPG-QGCEFNAVSYCAVISGFYKENCQIEAYHLFDE 206
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ + + PDI T+N ++ K G ++E E + S++ P++ TFN+ I ++ A
Sbjct: 207 MLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGA 266
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
D+ ++ +S++ P + ++N++I + K +AE KM P+ TY
Sbjct: 267 IDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNT 326
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
II + + A +I + G T ++++ C +G A +F + G
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y L K +K + +L+K M ++G P+
Sbjct: 387 FKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPD 425
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 121/284 (42%), Gaps = 10/284 (3%)
Query: 192 HTRDKAKALAKALGYFQKMKGMERC----KPNIVT------YNILLRACAQARNVDQVNA 241
HT + K + + LG K + ME + N+ + Y ++R + V +
Sbjct: 38 HTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVN 97
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
+F+ + P + +YN +M+ + G + V RMK PD+ T + + S+
Sbjct: 98 VFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFC 157
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
++ ++ + ++ ++I + K Q +A ++F +M P +
Sbjct: 158 ITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDIL 217
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
T+ +I + NV + ++F ++ K G + T N ++ C G EA L E+
Sbjct: 218 TFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESI 277
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+ G+TPD +Y L + K + + L +M +G+ PN+
Sbjct: 278 VSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNE 321
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 147/320 (45%), Gaps = 11/320 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + K G T A+ L M C+PD +Y ++I + K + + +A F
Sbjct: 164 YGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLC----KDRQVTEAFNLF 219
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M G + P+I TY L+ A V L ++ S + PD+ ++ V+DA K
Sbjct: 220 SQMVG-QGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCK 278
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + E ++ M +PD++T+ L+D + + D+ +VF ++ P + +
Sbjct: 279 EGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVIS 338
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE---IFD 384
+ ++I Y K KA Y+F++M ++ P TY + M+G C +V R ++ +F
Sbjct: 339 YTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTL--MHGLC-HVGRLQDAIALFH 395
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E+ G+ + T + +L++ C N EA L + + PD Y ++ +A
Sbjct: 396 EMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAG 455
Query: 445 MKELVQKLLKRMEQNGIVPN 464
E + L + G+ P+
Sbjct: 456 ELEAARDLFSNLSSKGLHPS 475
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 143/341 (41%), Gaps = 40/341 (11%)
Query: 163 LAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVT 222
A + +++ G +PDP+ + LI L K + +AL F KM E +PN+VT
Sbjct: 109 FAFSVLAKILKLGHQPDPTTFTTLIRG-LCVEGK---IGEALHLFDKMID-EGFQPNVVT 163
Query: 223 YNI----------------LLRACAQA-------------------RNVDQVNALFKELH 247
Y LLR+ Q R V + LF ++
Sbjct: 164 YGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMV 223
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
++PDI+TY ++ A K + ++L++M +++ PD++ F+ ++D+ K
Sbjct: 224 GQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVT 283
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
+ ++ ++ +P + T+ +++ + +A VF M + P I+Y +I
Sbjct: 284 EAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLI 343
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
Y + +A +F+E+ + T N ++ C G +A LF G
Sbjct: 344 NGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQM 403
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
PD TY +L + K E LLK +E + + P+ + +
Sbjct: 404 PDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVY 444
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 122/276 (44%), Gaps = 5/276 (1%)
Query: 135 MQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR 194
M QR D Y+ L+ + + A+ +F M G PD Y LI +
Sbjct: 291 MMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYC--- 347
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
K + KA+ F++M E P+ TYN L+ + ALF E+ PD
Sbjct: 348 -KIHKIDKAMYLFEEMCRKEWI-PDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPD 405
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
+ TY+ ++D+ KN ++E ++L ++++ PDI +N++ID + + +F
Sbjct: 406 LVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFS 465
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
+L P++ T+N MI K L +A +F +M +P TY I + +
Sbjct: 466 NLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNN 525
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
RA ++ +E+ G VST ++E +GL
Sbjct: 526 ETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDGL 561
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 128/321 (39%), Gaps = 44/321 (13%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ D I+S ++ + K+G+ A + M G PD Y L+ H + +
Sbjct: 263 LPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSE----MD 318
Query: 202 KALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
+A+ F M KG P++++Y L+ + +D+ LF+E+ PD TYN
Sbjct: 319 EAVKVFDMMVRKGF---APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYN 375
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
+M G +++ ++ M + PD++T+++L+DS K ++ + K++ S
Sbjct: 376 TLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEAS 435
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
P + +N +I +A A +F +++ PS TY
Sbjct: 436 NLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTY---------------- 479
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
N M+ C GL EA+ LF +PD TY + +
Sbjct: 480 -------------------NIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARG 520
Query: 440 YTKANMKELVQKLLKRMEQNG 460
+ + N +LL+ M G
Sbjct: 521 FLQNNETLRAIQLLEEMLARG 541
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/321 (19%), Positives = 131/321 (40%), Gaps = 5/321 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++KL+ + K + L ++M + G P+ N LI + H A + L
Sbjct: 59 FAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFS-VLAKI 117
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K+ +P+ T+ L+R + + LF ++ + P++ TY +++ K
Sbjct: 118 LKLGH----QPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 173
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G +L M+ C+PD++ + +IDS K + + +F ++ P + T
Sbjct: 174 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 233
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ S++ + +M K P + + ++ V+ A EI D +
Sbjct: 234 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 293
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ G + V T +++ +C+ EA +F+ G PD +Y L Y K + +
Sbjct: 294 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKID 353
Query: 448 LVQKLLKRMEQNGIVPNKRFF 468
L + M + +P+ + +
Sbjct: 354 KAMYLFEEMCRKEWIPDTKTY 374
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 91/216 (42%)
Query: 253 PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
P I + ++ + K + S+ ++M S P++ T N+LI+S+ V
Sbjct: 54 PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 113
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGY 372
++ +P TF ++I G+A ++F KM + P+ +TY +I
Sbjct: 114 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 173
Query: 373 CDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
N S A + + + V +++++ C + TEA LF G++PD T
Sbjct: 174 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 233
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
Y L A + V LL +M + I+P+ F
Sbjct: 234 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIF 269
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 106/265 (40%), Gaps = 1/265 (0%)
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L AL F ++ M P+IV + LL + A+ ++ V +L ++ + P++YT N
Sbjct: 37 LDDALSSFNRLLHMHP-PPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLN 95
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
+++++ + SVL+++ +PD TF LI + +F ++
Sbjct: 96 ILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDE 155
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
+P + T+ ++I K A + + M P + Y II V+ A
Sbjct: 156 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEA 215
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+F ++ G + T +++ A C L N + PD + + A
Sbjct: 216 FNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDA 275
Query: 440 YTKANMKELVQKLLKRMEQNGIVPN 464
K +++ M Q G+ P+
Sbjct: 276 LCKEGKVTEAHEIVDMMIQRGVEPD 300
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 66/163 (40%)
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGY 372
F L+H P++ F ++ + K + + +M + P+ T +I + +
Sbjct: 44 FNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCH 103
Query: 373 CDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
+ V A + ++ KLG +T ++ C+ G EA LF+ + G P+ T
Sbjct: 104 LNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVT 163
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
Y L K +LL+ MEQ P+ + +++
Sbjct: 164 YGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSL 206
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 148/317 (46%), Gaps = 5/317 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I+ + K G+ A + M+N PD VY LI+ K+ ++ F
Sbjct: 325 YNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGF----GKSGNVSVEYKLF 380
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+MK ++ P+ VTY ++ QA V + LF E+ L PD TY ++D Y K
Sbjct: 381 DEMK-RKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCK 439
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G +KE S+ ++M P+++T+ L+D K D ++ + +P + T
Sbjct: 440 AGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCT 499
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N++I K +A + ++M + P ITY I+ Y +++A E+ +
Sbjct: 500 YNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIML 559
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G + T N ++ +CM+G+ + + L + + G+ P+++T+ L K Y N
Sbjct: 560 DKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMR 619
Query: 448 LVQKLLKRMEQNGIVPN 464
++ K M G+VP+
Sbjct: 620 ATIEIYKGMHAQGVVPD 636
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 163/356 (45%), Gaps = 10/356 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L GKS ++F M++++ + D Y+ +I + + G+ A LFSEM +
Sbjct: 363 LISGFGKSGNVSVEYKLFDEMKRKK-IVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSK 421
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQ 232
G +PD Y ALI + KA + +A +M KG+ PN+VTY L+ +
Sbjct: 422 GLKPDEVTYTALIDGYC----KAGEMKEAFSLHNQMVEKGL---TPNVVTYTALVDGLCK 474
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
VD N L E+ E L P++ TYN +++ K G I++ ++ M PD IT
Sbjct: 475 CGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTIT 534
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+ ++D+Y K K ++ + ++ +PT+ TFN ++ + + + E + + M
Sbjct: 535 YTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWML 594
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
P+ T+ ++ Y +N+ EI+ + G +T N +++ +C
Sbjct: 595 DKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMK 654
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
EA L + G + +++Y L K + K E +KL + M +G + K +
Sbjct: 655 EAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIY 710
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 121/281 (43%), Gaps = 35/281 (12%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P++V+Y++++ Q + +V L +EL L P+ YTYN ++ K G + E E V
Sbjct: 285 PDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQV 344
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKR-------QAFDKME-------------------- 310
L MK+ + PD + + LI +GK + FD+M+
Sbjct: 345 LRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQ 404
Query: 311 --------QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
++F ++ KP T+ ++I Y KA +A + +M TP+ +T
Sbjct: 405 AGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVT 464
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y ++ C V A E+ E+S+ G V T NA++ C G +A L E
Sbjct: 465 YTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMD 524
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
G PD+ TY + AY K +LL+ M G+ P
Sbjct: 525 LAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQP 565
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 141/330 (42%), Gaps = 5/330 (1%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
R + D YS ++ + Q + L E++ G +P+ YN++I+ K
Sbjct: 281 RGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLC----KTG 336
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
+ +A + MK +R P+ V Y L+ ++ NV LF E+ + PD TY
Sbjct: 337 RVVEAEQVLRVMKN-QRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTY 395
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
++ + G + E + S M S KPD +T+ LID Y K + + ++
Sbjct: 396 TSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVE 455
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
P + T+ +++ K A + +M+ P+ TY +I N+ +
Sbjct: 456 KGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQ 515
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A ++ +E+ G T +++AYC G +A L + G+ P T+ +L
Sbjct: 516 AVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMN 575
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+ + M E ++L+K M GI+PN F
Sbjct: 576 GFCMSGMLEDGERLIKWMLDKGIMPNATTF 605
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 140/320 (43%), Gaps = 8/320 (2%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
++ V+ + G A LF ++ N G N + ++ D + A
Sbjct: 183 VFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFD---GIRTAFRV 239
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F++ + C N V+YNI+L Q V + ++L ++ PD+ +Y+ ++D Y
Sbjct: 240 FREYSEVGVCW-NTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYC 298
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+ + ++ ++ ++ KP+ T+N +I K + EQV + + + + P
Sbjct: 299 QVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNV 358
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRAREIFD 384
+ ++I +GK+ +F +M K P F+TY +I +G C V AR++F
Sbjct: 359 VYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMI--HGLCQAGKVVEARKLFS 416
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E+ G T A+++ YC G EA L G+TP+ TY L K
Sbjct: 417 EMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCG 476
Query: 445 MKELVQKLLKRMEQNGIVPN 464
++ +LL M + G+ PN
Sbjct: 477 EVDIANELLHEMSEKGLQPN 496
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 103/238 (43%), Gaps = 5/238 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + K G A+ L EM +G PD Y ++ A+ + AKA L
Sbjct: 500 YNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKA--HELLRI 557
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
KG++ P IVT+N+L+ + ++ L K + + + P+ T+N +M Y
Sbjct: 558 MLDKGLQ---PTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCI 614
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
++ + M + PD T+N+LI + K + + + K ++ T +
Sbjct: 615 RNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAAS 674
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
+NS+I + K + +A +F++M + Y+ + + N E+ DE
Sbjct: 675 YNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDE 732
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%)
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
D + A +F E S++G + N +L C G EA L G PD +Y
Sbjct: 231 DGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSY 290
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
++ Y + V KL++ +++ G+ PN+
Sbjct: 291 SVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQ 322
>gi|168000535|ref|XP_001752971.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695670|gb|EDQ82012.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 391
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 173/375 (46%), Gaps = 27/375 (7%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
+VF W + + + A+ Y+K+I+ G+ Q +LA LF EM G + +NALI
Sbjct: 1 QVFNWKKSKLGWEANPKEYAKMISFAGRISQPQLAADLFDEMEKRGIKKTAVSFNALI-- 58
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
H+ + KAL F+ MK C+P +VTYN L+ ++ +++ LF + E+
Sbjct: 59 --HSYGRNNEAHKALQLFEDMKATNDCQPTLVTYNTLISMYSRMGATEEMKKLFLDCKEA 116
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+PD +TYN ++ Y + G + +ME + +++ +CK D+IT+N I Y + A +KM
Sbjct: 117 GFSPDRHTYNALIWGYMRAGQLSQMEETFNELQAGECKADVITYNAQIIGYARANAVNKM 176
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIIN-YGKARLQGKAEYVFQKMTAMKYTPSFI----TYE 364
E VF S M + P ++I Y + + K E + M TP +
Sbjct: 177 EAVFSS-MQAAGIPINAMVGEILIEVYSRTKHFEKME---NALKIMDVTPGVQYGSRVHS 232
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKV----STLNAMLEAYCMNGLPTEADLLFEN 420
+I Y + ++ E+ +S++ ++ ++ +L+A++ AY G E
Sbjct: 233 MVIESYA---DANKLDEMEAAISRMFQNKRMFSSPKSLHALIMAYSRAGEYGRLAKTMEV 289
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLA 480
G SS Y +L Y K + ++++ + M P + ETF +
Sbjct: 290 VKGAGWILQSSIYNILISEYGKGGHLDRMEQVFREMMDASCPP-------SFETFQYMID 342
Query: 481 GSQSGSAKTDLTRSL 495
++ + + ++ R L
Sbjct: 343 AYEANNNEAEVDRIL 357
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 119/293 (40%), Gaps = 77/293 (26%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L G++++ + L++F M+ Y+ LI++ + G T LF + + +
Sbjct: 57 LIHSYGRNNEAHKALQLFEDMKATNDCQPTLVTYNTLISMYSRMGATEEMKKLFLDCKEA 116
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G PD YNALI ++ +A L++ F +++ E CK +++TYN + A+A
Sbjct: 117 GFSPDRHTYNALIWGYM----RAGQLSQMEETFNELQAGE-CKADVITYNAQIIGYARAN 171
Query: 235 NVDQVNALFKELHESILAP---------DIYT---------------------------Y 258
V+++ A+F + + + ++Y+ +
Sbjct: 172 AVNKMEAVFSSMQAAGIPINAMVGEILIEVYSRTKHFEKMENALKIMDVTPGVQYGSRVH 231
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQ---CKPDII------------------------ 291
+ V+++Y + EME+ +SRM N+ P +
Sbjct: 232 SMVIESYADANKLDEMEAAISRMFQNKRMFSSPKSLHALIMAYSRAGEYGRLAKTMEVVK 291
Query: 292 ---------TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
+N+LI YGK D+MEQVF+ +M + P+ TF MI Y
Sbjct: 292 GAGWILQSSIYNILISEYGKGGHLDRMEQVFREMMDASCPPSFETFQYMIDAY 344
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 37/66 (56%)
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
YNIL+ + ++D++ +F+E+ ++ P T+ ++DAY N E++ +L M+
Sbjct: 302 YNILISEYGKGGHLDRMEQVFREMMDASCPPSFETFQYMIDAYEANNNEAEVDRILDLMR 361
Query: 283 SNQCKP 288
C+P
Sbjct: 362 KAGCEP 367
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 152/341 (44%), Gaps = 9/341 (2%)
Query: 135 MQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR 194
+ K R D+ Y LI+ M K G+ A + +M+ G P YN LI + +
Sbjct: 296 IMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKG 355
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
D L KA GY +M P + TYN+L+ A +D+ + + K++ +S + PD
Sbjct: 356 D----LVKAFGYRDEMV-RRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPD 410
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
TYN +++ Y + G K+ ++ M S +P ++T+ LI KR + +F+
Sbjct: 411 SITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFE 470
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC- 373
++ P L FN++I + +A + ++M P +TY + M G C
Sbjct: 471 KIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTL--MQGRCR 528
Query: 374 -DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
V ARE+ E+ + G + N ++ Y G +A + + ++G P T
Sbjct: 529 EGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLT 588
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
Y L + K +L ++LLK M GI P+ + +E
Sbjct: 589 YNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIE 629
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 162/351 (46%), Gaps = 11/351 (3%)
Query: 115 LFEELGKSDK-WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
LF +L +++ W+ E+FR K Y ++ +I V+ K+G+ + A M N
Sbjct: 210 LFLKLNQTETVWVLYAEMFRLKIKSTVYT-----FNIMINVLCKEGKLKKAKDFIGSMEN 264
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G +P+ YN +I + +R + + A+ + K +G+E P+ TY L+ +
Sbjct: 265 LGVKPNVVTYNTVIHGYC-SRGRVEG-ARMVLDIMKNRGVE---PDSYTYGSLISGMCKG 319
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+++ + + +++ E L P TYN ++D Y G + + M P + T+
Sbjct: 320 GKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTY 379
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
NLLI + D+ + + K + S P T+N +I Y + KA + +M +
Sbjct: 380 NLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMIS 439
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P+ +TY +I + + + A ++F+++ + G + NA+++ +C NG
Sbjct: 440 KGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDR 499
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A L + + PD TY L + + E ++LLK M++ GI P+
Sbjct: 500 AFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPD 550
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 150/352 (42%), Gaps = 17/352 (4%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
EL + D +C + M K++ + ++ ++++ K QT L++EM +
Sbjct: 178 ELKRGDDAFECFD----MMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIK 233
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNV 236
+N +I K L KA + M+ + KPN+VTYN ++ C++ R V
Sbjct: 234 STVYTFNIMINVLC----KEGKLKKAKDFIGSMENL-GVKPNVVTYNTVIHGYCSRGR-V 287
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
+ + + + PD YTY ++ K G ++E +L +MK P +T+N L
Sbjct: 288 EGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTL 347
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK---AEYVFQKMTA 353
ID Y + K ++ PT+ T+N +I L+GK A+ + + M
Sbjct: 348 IDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLI---HALFLEGKMDEADGMIKDMGD 404
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P ITY +I Y C N +A + DE+ G + T +++
Sbjct: 405 SGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKA 464
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
AD LFE G +PD + L + + LLK M++ IVP++
Sbjct: 465 ADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDE 516
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 130/297 (43%), Gaps = 9/297 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I +G+ A + M+N G PD Y +LI+ K L +A G
Sbjct: 274 YNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMC----KGGKLEEASGIL 329
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+KMK + P VTYN L+ ++ + E+ + P + TYN ++ A
Sbjct: 330 EKMKEIGLL-PTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFL 388
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + E + ++ M + PD IT+N+LI+ Y + K + ++ +PTL T
Sbjct: 389 EGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVT 448
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDE 385
+ S+I K A+ +F+K+ +P I + +I G+C N+ RA + E
Sbjct: 449 YTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALID--GHCANGNLDRAFALLKE 506
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+ K T N +++ C G EA L + G+ PD +Y L Y+K
Sbjct: 507 MDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSK 563
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 141/301 (46%), Gaps = 20/301 (6%)
Query: 86 LMRSFSDKEPLVR-----TLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRW 140
L+++F ++ +VR T++ Y ++ H L ++ ++D ++ +
Sbjct: 357 LVKAFGYRDEMVRRAILPTVSTYNLLI---HALFLEGKMDEADGMIKDM-------GDSG 406
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
+ D+ Y+ LI + G + A L EM + G +P Y +LI L R++ KA
Sbjct: 407 IVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYV-LSKRNRMKA- 464
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
A F+K+ E P+++ +N L+ N+D+ AL KE+ + + PD TYN
Sbjct: 465 --ADDLFEKII-REGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNT 521
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
+M + G ++E +L MK +PD I++N LI Y KR + + ++
Sbjct: 522 LMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIG 581
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
PTL T+N++I K + AE + ++M + TP TY +I G D+ S A
Sbjct: 582 FNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEAS 641
Query: 381 E 381
+
Sbjct: 642 D 642
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 118/280 (42%), Gaps = 39/280 (13%)
Query: 221 VTYNILLRACAQARNVDQVNALFKELHESILAPDI------------------------- 255
+ +++L+RAC + + D F + E + P I
Sbjct: 167 IVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAE 226
Query: 256 ----------YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
YT+N +++ K G +K+ + + M++ KP+++T+N +I Y R
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGR 286
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+ V + + +P T+ S+I K +A + +KM + P+ +TY
Sbjct: 287 VEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNT 346
Query: 366 IITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+I GYC+ ++ +A DE+ + VST N ++ A + G EAD + ++ +
Sbjct: 347 LID--GYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGD 404
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
G+ PDS TY +L Y + + L M GI P
Sbjct: 405 SGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQP 444
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 170/403 (42%), Gaps = 76/403 (18%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
EV+ M + DT YS LI+ K G+ A+ LF EM+++ +P +Y L+
Sbjct: 218 EVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGI 277
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ K + KAL F++MK C P + TY L++ +A VD+ +K++
Sbjct: 278 YF----KVGKVEKALDLFEEMK-RAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRD 332
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA---- 305
L PD+ N +M+ GK G ++E+ +V S M +C P ++++N +I + + +A
Sbjct: 333 GLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSE 392
Query: 306 ----FDKME----------------------QVFKSL-----MHSKEKPTLPT-FNSMII 333
FDKM+ +V K+L M K P P + S+I
Sbjct: 393 VSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIN 452
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
GKA+ A +F+++ S Y +I +G C +S A ++F+E+ G
Sbjct: 453 ALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGP 512
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFE-----------NSHNM------------------ 424
V NA++ G+ EA+ L NSHN+
Sbjct: 513 DVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMF 572
Query: 425 ------GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
G+ PD TY L + A M E ++++ M+ G
Sbjct: 573 ETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGF 615
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 142/334 (42%), Gaps = 8/334 (2%)
Query: 130 EVFRWMQ---KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
E++R +Q + + + S+L+ +G+ A+ +F + + C+P S YN++
Sbjct: 144 EMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSV 203
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I + K + +M C P+ +TY+ L+ + + D LF E+
Sbjct: 204 ILMLMQEGQHEKVHE----VYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEM 259
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
++ + P Y ++ Y K G +++ + MK C P + T+ LI GK
Sbjct: 260 KDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRV 319
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
D+ +K ++ P + N+++ GK + VF +M + TP+ ++Y +
Sbjct: 320 DEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTV 379
Query: 367 I-TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
I ++ +VS FD++ T + +++ YC +A LL E G
Sbjct: 380 IKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKG 439
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
P + Y L A KA E +L K +++N
Sbjct: 440 FPPCPAAYCSLINALGKAKRYEAANELFKELKEN 473
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 149/341 (43%), Gaps = 14/341 (4%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM----RNSGCRPDPSVYN 184
++ F+W K+R + D Y LI + + RL ++ + RN+ P+V +
Sbjct: 110 IQFFKWAGKRRNFQHDCSTYMTLIRCL---EEARLYGEMYRTIQEVVRNTYVSVSPAVLS 166
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
L+ A +AK ++KAL F + KG +CKP TYN ++ Q ++V+ ++
Sbjct: 167 ELVKA----LGRAKMVSKALSVFYQAKG-RKCKPTSSTYNSVILMLMQEGQHEKVHEVYT 221
Query: 245 EL-HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR 303
E+ +E PD TY+ ++ +Y K G + MK N +P + L+ Y K
Sbjct: 222 EMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKV 281
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
+K +F+ + + PT+ T+ +I GKA +A ++ M TP +
Sbjct: 282 GKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFL 341
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA-YCMNGLPTEADLLFENSH 422
++ + G V +F E+ V + N +++A + +E F+
Sbjct: 342 NNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMK 401
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
V+P TY +L Y K N E LL+ M++ G P
Sbjct: 402 ADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPP 442
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 119/253 (47%), Gaps = 17/253 (6%)
Query: 130 EVFRWMQKQRWYIADTG-----IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
EV W K + AD+ YS LI K + A+ L EM G P P+ Y
Sbjct: 392 EVSSWFDKMK---ADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYC 448
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVT--YNILLRACAQARNVDQVNAL 242
+LI A KAK A F+++K N+ + Y ++++ + + + L
Sbjct: 449 SLINA----LGKAKRYEAANELFKELK---ENFGNVSSRVYAVMIKHFGKCGKLSEAVDL 501
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
F E+ PD+Y YN +M K GMI E S+L +M+ N C+ DI + N++++ + +
Sbjct: 502 FNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFAR 561
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ ++F+++ HS KP T+N+++ + A + +A + ++M + IT
Sbjct: 562 TGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAIT 621
Query: 363 YECIITMYGYCDN 375
Y I+ G D+
Sbjct: 622 YSSILDAVGNVDH 634
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 71/177 (40%), Gaps = 7/177 (3%)
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM- 354
L+ + G+ + K VF K KPT T+NS+I+ + +G+ E V + T M
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQ---EGQHEKVHEVYTEMC 224
Query: 355 ---KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P ITY +I+ Y A +FDE+ +L Y G
Sbjct: 225 NEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKV 284
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+A LFE G +P TY L K KA + K M ++G+ P+ F
Sbjct: 285 EKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFL 341
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 176/380 (46%), Gaps = 29/380 (7%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L GK+ + + ++VF M K ++ L+ ++ K+G+T +A +F EM ++
Sbjct: 162 LIRSYGKAGLFQESVQVFNSM-KSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLST 220
Query: 175 -GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G PD +N LI K + + +F++M +C P++VTYN L+ +A
Sbjct: 221 YGVTPDTYTFNILIRGFC----KNSMVDEGFRFFKEMSRF-KCDPDLVTYNTLVDGLCRA 275
Query: 234 RNVD----QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
V+ VN + K+ + L PD+ TY ++ Y I E V M S KP+
Sbjct: 276 GKVNIAHNVVNGMVKK--STNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPN 333
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFK-SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
IT+N LI + Q DK++Q+F+ +L P T N+++ + A A VF
Sbjct: 334 EITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVF 393
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK---LGKDMKVSTLNA----M 401
+KM + P TY +I N RA ++FDELS+ L +D + L A M
Sbjct: 394 EKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSM 453
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
E C NG +A+ +F G T D ++K+L K + + E +LL M +
Sbjct: 454 FEFLCRNGKTAKAERVFRQLMKRG-TQDPLSFKILIKGHCREGTFEAGYELLVLMLRRDF 512
Query: 462 VPNKRFFLEALETFSSSLAG 481
VP+ LET+ S + G
Sbjct: 513 VPD-------LETYQSLIDG 525
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 158/343 (46%), Gaps = 13/343 (3%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAM-WLFSEMR--NSGCRPDPSVY 183
+ L+ F W + + D Y ++ ++G+ +A +LFS R N + + +
Sbjct: 101 KALQFFNWAPELGFTHNDQS-YFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFF 159
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
N+LI ++ KA +++ F MK + P++VT+N LL + + ++F
Sbjct: 160 NSLIRSY----GKAGLFQESVQVFNSMKSVG-VSPSVVTFNSLLLILLKRGRTNMAQSVF 214
Query: 244 KELHESI-LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
E+ + + PD YT+N ++ + KN M+ E M +C PD++T+N L+D +
Sbjct: 215 DEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCR 274
Query: 303 RQAFDKMEQVFKSLMH--SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
+ V ++ + P + T+ +++ Y +A VF++M + P+
Sbjct: 275 AGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNE 334
Query: 361 ITYECIITMYGYCDNVSRAREIFD-ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
ITY +I + + ++IF+ L G TLN ++ A+C G +A +FE
Sbjct: 335 ITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFE 394
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+ V PDS+TY +L + + E ++L + + I+
Sbjct: 395 KMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEIL 437
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 82/180 (45%), Gaps = 11/180 (6%)
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM- 351
FN LI SYGK F + QVF S+ P++ TFNS+++ K A+ VF +M
Sbjct: 159 FNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEML 218
Query: 352 TAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
+ TP TY I + G+C N V F E+S+ D + T N +++ C G
Sbjct: 219 STYGVTPD--TYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAG 276
Query: 410 LPTEA----DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
A + + + S N+ PD TY L + Y + + + + M G+ PN+
Sbjct: 277 KVNIAHNVVNGMVKKSTNL--NPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNE 334
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 179/393 (45%), Gaps = 17/393 (4%)
Query: 85 VLMRSFSDKEPLVRTLNKYVK-----VVRSEHCF-LLFEELGKSDKWLQCLEVFRWMQKQ 138
VL+ ++ + V LN + +V + F ++ + GK + + +F MQ+Q
Sbjct: 372 VLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQ 431
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
I D Y +IA + G+ AM F++M G +P+ VY++LI + K
Sbjct: 432 -GVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVK 490
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
A K L +G+ R PNIV +N ++ + + V + + +F + PD+ T+
Sbjct: 491 A--KELVSEMMSRGIPR--PNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITF 546
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N ++D YG G I++ VL M S +PD++++N LID Y + D +F ++
Sbjct: 547 NSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLS 606
Query: 319 SKEKPTLPTFNSMIIN-YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN-- 375
KPT T+ ++ + R G A+ + +M T T C I + G C N
Sbjct: 607 KGVKPTTITYGIILHGLFNDGRTVG-AKKMCHEMIESGTTMDIST--CGIILGGLCRNNC 663
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
A +F +L + ++ +N M++A EA LF++ G+ P++STY +
Sbjct: 664 DDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGV 723
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+ K K E + ME++G P+ R
Sbjct: 724 MIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLL 756
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 130/301 (43%), Gaps = 8/301 (2%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
L M G PD YN ++ +AL +K G C PN+VTYN +
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGG---CSPNVVTYNTV 233
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+ + V + LF E+ + + PD+ TY ++DA K + + E VL +M SN
Sbjct: 234 IHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGF 293
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
+P+ +T+N +I Y + + +F+ + P + T NS + + K +A
Sbjct: 294 QPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAE 353
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
F M A + P+ +TY ++ Y +F+ + G N +++AY
Sbjct: 354 FFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYG 413
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN-----MKELVQKLLKRMEQNGI 461
G+ E L+F GV PD+ TY ++ A+++ M + Q + ++ GI
Sbjct: 414 KRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGI 473
Query: 462 V 462
V
Sbjct: 474 V 474
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 145/353 (41%), Gaps = 41/353 (11%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I + ++G+ A LF EM G PD Y ++I A KA+A+ KA
Sbjct: 230 YNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALC----KARAMDKAELVL 285
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M +PN VTYN ++ + + + +F+E+ L P+I T N M + K
Sbjct: 286 RQMIS-NGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCK 344
Query: 268 NGMIKEMESVLSRMKSNQCKPDIIT----------------------------------- 292
+G KE M + KP+++T
Sbjct: 345 HGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRV 404
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
FN++ID+YGKR D+ +F + P T+ +I + + A F +M
Sbjct: 405 FNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMI 464
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG-KDMKVSTLNAMLEAYCMNGLP 411
AM P I Y +I + N+ +A+E+ E+ G + N+++ + C G
Sbjct: 465 AMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRV 524
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA +F+ ++G PD T+ L Y E +L M GI P+
Sbjct: 525 VEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPD 577
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 155/350 (44%), Gaps = 43/350 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I GQ + +F EM + G P+ N+ +++ L K+K A+ +F
Sbjct: 300 YNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSS-LCKHGKSKEAAE---FF 355
Query: 208 QKMKGMERCKPNIVTYNILLRACA-QARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
M KPN+VTY++LL A + VD +N LF + + + D +N V+DAYG
Sbjct: 356 DSMAAKGH-KPNLVTYSVLLHGYATEGCFVDMLN-LFNSMEGNGIVADQRVFNIVIDAYG 413
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK----RQAFDKMEQ----------- 311
K GM+ E + ++M+ PD T+ ++I ++ + A DK Q
Sbjct: 414 KRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGI 473
Query: 312 VFKSL-----MH-----SKE-----------KPTLPTFNSMIINYGKARLQGKAEYVFQK 350
V+ SL MH +KE +P + FNS+I + K +A +F
Sbjct: 474 VYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDF 533
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
+ + P IT+ +I YG + +A + D + G + V + N +++ YC NG
Sbjct: 534 VIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGR 593
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+ +LF + GV P + TY ++ +K+ M ++G
Sbjct: 594 IDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESG 643
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 121/297 (40%), Gaps = 38/297 (12%)
Query: 218 PNIVTYNILLRACAQA------------------------------------RNVDQVNA 241
P + TYNIL+ C + R+ D VN
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM--KSNQCKPDIITFNLLIDS 299
L + E + PD +YN V+ ++ + +L M KS C P+++T+N +I
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
+ K +F +M P + T+ S+I KAR KAE V ++M + + P+
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
+TY C+I Y +F E++ G + T N+ + + C +G EA F+
Sbjct: 297 KVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFD 356
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+ G P+ TY +L Y + L ME NGIV ++R F ++ +
Sbjct: 357 SMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYG 413
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 156/350 (44%), Gaps = 10/350 (2%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
+ R + R + Y+ L+ + + + LF +G + D V + L+
Sbjct: 105 ICREEARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCL 164
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHES 249
H + ++ + L + G+E P+ ++YN +++ C +R+ ++ L + +S
Sbjct: 165 YHAK-RSDDVVNLLLHRMPELGVE---PDTISYNTVVKTLCEDSRSQRALDLLHTMVKKS 220
Query: 250 I-LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
+P++ TYN V+ + G + + ++ M PD++T+ +ID+ K +A DK
Sbjct: 221 GGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDK 280
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
E V + ++ + +P T+N MI Y + + +F++MT+ P+ +T C
Sbjct: 281 AELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVT--CNSY 338
Query: 369 MYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
M C + A E FD ++ G + T + +L Y G + LF + G+
Sbjct: 339 MSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGI 398
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
D + ++ AY K M + + +M++ G++P+ + + FS
Sbjct: 399 VADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFS 448
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 122/297 (41%), Gaps = 9/297 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ +I + K+G+ A +F + + G RPD +N+LI + + KA G
Sbjct: 511 FNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGY----GLVGKIEKAFGVL 566
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
M G+E P++V+YN L+ + +D LF E+ + P TY ++
Sbjct: 567 DAMISAGIE---PDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGL 623
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+G + + M + DI T +++ + D+ +FK L K +
Sbjct: 624 FNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNI 683
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
N+MI K R + +A+ +F ++A P+ TY +I +V A +F
Sbjct: 684 AIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSL 743
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+ K G LN ++ G +A ++ ++ST LL +++
Sbjct: 744 MEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSR 800
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 174/423 (41%), Gaps = 46/423 (10%)
Query: 81 ELVRVLMRS--FSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQ 138
+L++ +MR D + + + E FLLF+E+ K
Sbjct: 274 QLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM-----------------KM 316
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
D Y+ LI K G A WLF EMR+ GC P Y ALI A+L KAK
Sbjct: 317 VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYL----KAK 372
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL------------ 246
+ +A F +M C+PN VTY L+ +A N+ + ++ +L
Sbjct: 373 QVPQANDIFHRMVD-AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFY 431
Query: 247 ----HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
LAP++ TY ++D K + +L M S+ C+P+ I ++ LID + K
Sbjct: 432 FPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCK 491
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
D ++VF + P++ T+ S+I K A V +M TP+ +T
Sbjct: 492 AGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVT 551
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL---LFE 419
Y +I +A ++ + + G V T A+++ G + DL LF
Sbjct: 552 YTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL---GKAGKIDLSLDLFT 608
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSL 479
G +P+ TY++L A + + + LL M+Q + + A++ FS S
Sbjct: 609 QMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSF 668
Query: 480 AGS 482
S
Sbjct: 669 IAS 671
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 121/276 (43%), Gaps = 18/276 (6%)
Query: 207 FQKMKGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
FQ +K M R P+ TY+ ++ A V++ LF+E+ + PD+YTY ++D+
Sbjct: 273 FQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDS 332
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ K G+I++ + + M+S C P ++T+ LI +Y K + + +F ++ + +P
Sbjct: 333 FCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 392
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMK----------------YTPSFITYECIIT 368
T+ +++ KA KA V+ K+ P+ +TY ++
Sbjct: 393 DVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD 452
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
V A E+ D + G + +A+++ +C G A +F G P
Sbjct: 453 GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLP 512
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
TY L K +L K+L +M ++ PN
Sbjct: 513 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPN 548
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 157/394 (39%), Gaps = 71/394 (18%)
Query: 130 EVFRWMQKQRW--YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
E ++ + R I + Y L++ KK Q + + M GC P+PS++N+L+
Sbjct: 125 EAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLV 184
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMER--CKPNIVTYNILLRA-CAQAR---------- 234
++ + +D A A ++ + M C P V YNI + + C Q +
Sbjct: 185 HSYCNEKDYAYA-------YKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLA 237
Query: 235 -----------------NV-------------DQVNALFKELHESILAPDIYTYNGVMDA 264
NV D+ L KE+ PD TY+ V+
Sbjct: 238 EKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITF 297
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+++ + MK PD+ T+ +LIDS+ K ++ + +F+ + PT
Sbjct: 298 LCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPT 357
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ T+ ++I Y KA+ +A +F +M P+ +TY ++ N+S+A E++
Sbjct: 358 VVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYA 417
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+L + T ++ ++D F + P+ TY L KA+
Sbjct: 418 KL--------IGTSDS-----------ADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAH 458
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ +LL M +G PN + ++ F +
Sbjct: 459 KVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKA 492
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 119/321 (37%), Gaps = 73/321 (22%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG------- 269
+P+ VTYN L++ + A VD + KE+ ES D +T A K G
Sbjct: 37 RPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALD 96
Query: 270 MIK-------------------------EMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
MI+ E S L RM+ N C P+++T+ L+ + K++
Sbjct: 97 MIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKK 156
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
+++ +M P FNS++ +Y + A + +MT P ++ Y
Sbjct: 157 QLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYN 216
Query: 365 CIIT-------------------MYG--------------------YC--DNVSRAREIF 383
I +YG C +A ++
Sbjct: 217 IFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLI 276
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
E+ + G ST + ++ C +A LLF+ +GVTPD TY +L ++ KA
Sbjct: 277 KEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKA 336
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+ E Q L + M G P
Sbjct: 337 GLIEQAQWLFEEMRSVGCSPT 357
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 125/359 (34%), Gaps = 81/359 (22%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + K+ K EVF M K Y+ Y+ LI M K G+ LAM + S+M
Sbjct: 485 LIDGFCKAGKIDSAQEVFLQMTKC-GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 543
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
C P+ Y A+I + KAL K L ++ KG C PN+VTY L+ +A
Sbjct: 544 SCTPNVVTYTAMIDGLCRIGESEKAL-KLLSLMEE-KG---CSPNVVTYTALIDGLGKAG 598
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIK-------EME------------ 275
+D LF ++ +P+ TY +++ G++ EM+
Sbjct: 599 KIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYR 658
Query: 276 --------------SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH--S 319
+L M+S P + +LID + K + ++ K +M S
Sbjct: 659 CAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPS 718
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII------------ 367
K + S+I A +A ++ +MT + P + C+I
Sbjct: 719 SVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEA 778
Query: 368 ----------------------------TMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
+ GY N+ ++ D S S L
Sbjct: 779 LQLCYGICHEVGLLLSYTTQIFLFTFVVIVVGYGKNIEPQVDLGDSFSSFTVSASASNL 837
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 153/332 (46%), Gaps = 10/332 (3%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
V++ M ++R + + + +I + K G+ + A + +M+ G P YN +I +
Sbjct: 216 VYKEMIRRRIGV-NVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGY 274
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
KA + KA ++M +R PN +T+NIL+ + NV +F+E+
Sbjct: 275 C----KAGKMFKADALLKEMVA-KRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQG 329
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
L P++ TYN +++ NG + E + +M KP+++T+N LI+ + K++ +
Sbjct: 330 LQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAR 389
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
++ + P + TFN++I YGKA A + M P+ TY C+I
Sbjct: 390 EMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIV-- 447
Query: 371 GYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
G+C NV AR++ E+ G + T N +++A C G +A L + +G+ P
Sbjct: 448 GFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNP 507
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
TY L Y + + ME+ G
Sbjct: 508 SHLTYNALIDGYFREGNSTAALNVRTLMEKKG 539
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 157/325 (48%), Gaps = 11/325 (3%)
Query: 140 WYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKA 199
W A++ I L+ K G+ LA+ F + G R N ++ + + K
Sbjct: 154 WGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLV----KEGR 209
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
+ +++M R N+VT+++++ + + + +++ +P + TYN
Sbjct: 210 IGVVESVYKEMI-RRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYN 268
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
++D Y K G + + +++L M + + P+ ITFN+LID + + + ++VF+ +
Sbjct: 269 TIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQ 328
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VS 377
+P + T+NS+I +A + KM+ M P+ +TY +I G+C +
Sbjct: 329 GLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALIN--GFCKKKMLK 386
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
ARE+ D++ K G V T N +++AY G +A LL + GV P+ STY L
Sbjct: 387 EAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446
Query: 438 KAYTK-ANMKELVQKLLKRMEQNGI 461
+ + N+KE +KL K ME NG+
Sbjct: 447 VGFCREGNVKE-ARKLAKEMEGNGL 470
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 133/270 (49%), Gaps = 5/270 (1%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
+F EM+ G +P+ YN+LI L + K L +ALG KM GM KPN+VTYN L
Sbjct: 321 VFEEMQRQGLQPNVVTYNSLING-LCSNGK---LDEALGLQDKMSGMG-LKPNVVTYNAL 375
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+ + + + + + ++ + LAP++ T+N ++DAYGK G + + + S M
Sbjct: 376 INGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGV 435
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
P++ T+N LI + + + ++ K + + K L T+N ++ K KA
Sbjct: 436 CPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVR 495
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+ +M + PS +TY +I Y N + A + + K G+ + T N +++ +C
Sbjct: 496 LLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFC 555
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
G EA+ L G+ P+ +TY +L
Sbjct: 556 NKGKLEEANRLLNEMLEKGLIPNRTTYDIL 585
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 110/214 (51%), Gaps = 4/214 (1%)
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K G I +ESV M + +++TF+++I+ K F K V + + P++
Sbjct: 206 KEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVI 265
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFD 384
T+N++I Y KA KA+ + ++M A + P+ IT+ +I G+C +NV+ A+++F+
Sbjct: 266 TYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILID--GFCRDENVTAAKKVFE 323
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E+ + G V T N+++ C NG EA L + MG+ P+ TY L + K
Sbjct: 324 EMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKK 383
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
M + +++L + + G+ PN F ++ + +
Sbjct: 384 MLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKA 417
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 157/356 (44%), Gaps = 34/356 (9%)
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGK-KGQTRLAMWLFSEMRNS---------------- 174
F+W QK+ I + + +L+ ++ K ++ L S +N+
Sbjct: 94 FKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGS 153
Query: 175 -GCRPDPSVYNALITAHLHTRDKAKALA---KALGYFQKMKGMERCKPNIVTYNILLRAC 230
GC + + + L+ A++ + AL +A Y ++ + C P +V+
Sbjct: 154 WGC-ANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALS-CNPMLVSL------- 204
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
+ + V +++KE+ + ++ T++ V++ K G ++ V+ MK+ P +
Sbjct: 205 VKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSV 264
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
IT+N +ID Y K K + + K ++ + P TFN +I + + A+ VF++
Sbjct: 265 ITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEE 324
Query: 351 MTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
M P+ +TY +I G C N + A + D++S +G V T NA++ +C
Sbjct: 325 MQRQGLQPNVVTYNSLIN--GLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKK 382
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ EA + ++ G+ P+ T+ L AY KA + L M G+ PN
Sbjct: 383 KMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPN 438
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
AD Y+ L+ + KKG+TR A+ L EM G P YNALI + + AL
Sbjct: 472 ADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAAL-- 529
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
+ + KG + NIVTYN+L++ +++ N L E+ E L P+ TY+ +
Sbjct: 530 NVRTLMEKKGR---RANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILR 586
Query: 263 DAYGKNGMIKEMESVL 278
D + G I +++ L
Sbjct: 587 DEMMEKGFIPDIDGHL 602
>gi|15242530|ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39980, chloroplastic; Flags: Precursor
gi|10176990|dbj|BAB10222.1| unnamed protein product [Arabidopsis thaliana]
gi|332007115|gb|AED94498.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 678
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 167/381 (43%), Gaps = 38/381 (9%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L + + W + L + W+ ++ Y Y+ ++ + + Q +A LF EMR P
Sbjct: 129 LSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAP 188
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKG-------------------------- 212
D Y+ LIT+ K AL + QKM+
Sbjct: 189 DRYTYSTLITSF----GKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKA 244
Query: 213 ---MERCK-----PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
R K P++V YN ++ +A+ + L KE++E+ + P+ +Y+ ++
Sbjct: 245 ISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSV 304
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
Y +N E SV + MK C D+ T N++ID YG+ + +++F SL +P
Sbjct: 305 YVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPN 364
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ ++N+++ YG+A L G+A ++F+ M + +TY +I +YG +A +
Sbjct: 365 VVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQ 424
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E+ G + T + ++ + G A LF+ + GV D Y+ + AY +
Sbjct: 425 EMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVG 484
Query: 445 MKELVQKLLKRMEQNGIVPNK 465
+ ++LL ++ +P +
Sbjct: 485 LMGHAKRLLHELKLPDNIPRE 505
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 146/308 (47%), Gaps = 7/308 (2%)
Query: 134 WMQK--QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
W+QK Q D +YS LI + + A+ +FS ++ SG PD YN++I +
Sbjct: 212 WLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVY- 270
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KAK +A ++M PN V+Y+ LL + + ++F E+ E
Sbjct: 271 ---GKAKLFREARLLIKEMNEAG-VLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNC 326
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
A D+ T N ++D YG+ M+KE + + ++ +P+++++N ++ YG+ + F +
Sbjct: 327 ALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIH 386
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+F+ + + + T+N+MI YGK KA + Q+M + P+ ITY II+++G
Sbjct: 387 LFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWG 446
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ RA +F +L G ++ M+ AY GL A L P +
Sbjct: 447 KAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRET 506
Query: 432 TYKLLYKA 439
+L KA
Sbjct: 507 AITILAKA 514
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 151/336 (44%), Gaps = 9/336 (2%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ +T YS L++V + + A+ +F+EM+ C D + N +I + + +
Sbjct: 292 LPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVY----GQLDMVK 347
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+A F ++ M+ +PN+V+YN +LR +A + LF+ + + ++ TYN +
Sbjct: 348 EADRLFWSLRKMD-IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTM 406
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ YGK ++ +++ M+S +P+ IT++ +I +GK D+ +F+ L S
Sbjct: 407 IKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGV 466
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
+ + +MI+ Y + L G A+ + ++ P I E IT+ A
Sbjct: 467 EIDQVLYQTMIVAYERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGRTEEATW 522
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+F + + G+ +S M+ Y N +FE G PDS+ ++ AY
Sbjct: 523 VFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYG 582
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
K E + + M++ G V + L +SS
Sbjct: 583 KQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSS 618
>gi|357159149|ref|XP_003578355.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Brachypodium distachyon]
Length = 857
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 154/320 (48%), Gaps = 10/320 (3%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L F W+++Q + D Y+ +I ++G+ Q + L EM C+P YN +I
Sbjct: 348 LGFFHWLKRQPGFKHDGHTYTTMIGILGQARQFGIMRNLLHEMNRDRCKPTVVTYNRII- 406
Query: 189 AHLHTRDKAKALAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
H +A L +A+ F++M+ G E P+ VTY L+ A+A ++ L+ +
Sbjct: 407 ---HAYGRANYLREAVKVFEEMEEAGYE---PDRVTYCTLIDIHAKAGYLEVAMDLYGRM 460
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
E L+PD +TY+ +++ GK G + + M N C P+++T+N++I K + +
Sbjct: 461 QEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIIIALQAKARNY 520
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
D + ++++ + + +P T++ ++ G +AE VF +M + P Y +
Sbjct: 521 DNVVKLYRDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR-RDWAPDEPVYGLL 579
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
+ ++G NV +A + + + G V T N++L A+ +A + +N G+
Sbjct: 580 VDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGL 639
Query: 427 TPDSSTYKLLYKAYTKANMK 446
P TY LL T A+ +
Sbjct: 640 VPSLQTYTLLLSCCTDAHAQ 659
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 156/350 (44%), Gaps = 42/350 (12%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ G+++ + ++VF M++ Y D Y LI + K G +AM L+ M+
Sbjct: 405 IIHAYGRANYLREAVKVFEEMEEAG-YEPDRVTYCTLIDIHAKAGYLEVAMDLYGRMQEV 463
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQA 233
G PD Y+A++ K LA A F +M +E C PN+VTYNI++ A+A
Sbjct: 464 GLSPDTFTYSAMVNC----LGKGGQLAAAYKLFCEM--IENGCTPNLVTYNIIIALQAKA 517
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
RN D V L++++ + PD TY+ VM+ G G + E E+V M+ + PD +
Sbjct: 518 RNYDNVVKLYRDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRRDWA-PDEPVY 576
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
LL+D +GK DK + +++ +P +PT NS++ + K A V Q M A
Sbjct: 577 GLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLA 636
Query: 354 MKYTPSFITYECIIT-------MYGYC-------------------------DNV-SRAR 380
PS TY +++ G C +NV R
Sbjct: 637 QGLVPSLQTYTLLLSCCTDAHAQMGLCCQLMAITGHPAHMFLLYLPDAEPGGENVRDHTR 696
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
D + ++ K ++A+++ +GL EA ++E + V PDS
Sbjct: 697 YFLDMMHSEDRESKRGLMDAVIDFLHKSGLKEEAGFIWEVAAQKNVYPDS 746
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 118/269 (43%), Gaps = 15/269 (5%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
ALG+F +K K + TY ++ QAR + L E++ P + TYN ++
Sbjct: 347 ALGFFHWLKRQPGFKHDGHTYTTMIGILGQARQFGIMRNLLHEMNRDRCKPTVVTYNRII 406
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
AYG+ ++E V M+ +PD +T+ LID + K + ++ +
Sbjct: 407 HAYGRANYLREAVKVFEEMEEAGYEPDRVTYCTLIDIHAKAGYLEVAMDLYGRMQEVGLS 466
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P T+++M+ GK A +F +M TP+ +TY II + ++AR
Sbjct: 467 PDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIIIALQ------AKARN- 519
Query: 383 FDELSKLGKDMKVS-------TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+D + KL +DM+V+ T + ++E G EA+ +F PD Y L
Sbjct: 520 YDNVVKLYRDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRR-DWAPDEPVYGL 578
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L + KA + M Q+G+ PN
Sbjct: 579 LVDLWGKAGNVDKALGWYHAMLQDGLQPN 607
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%)
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
K D T+ +I G+ + F M + + + KPT+ T+N +I YG+A +A
Sbjct: 361 KHDGHTYTTMIGILGQARQFGIMRNLLHEMNRDRCKPTVVTYNRIIHAYGRANYLREAVK 420
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
VF++M Y P +TY +I ++ + A +++ + ++G T +AM+
Sbjct: 421 VFEEMEEAGYEPDRVTYCTLIDIHAKAGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLG 480
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
G A LF G TP+ TY ++ KA + V KL + M+ G P+K
Sbjct: 481 KGGQLAAAYKLFCEMIENGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQVAGFRPDKI 540
Query: 467 FFLEALETFS 476
+ +E
Sbjct: 541 TYSIVMEVLG 550
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 155/360 (43%), Gaps = 48/360 (13%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y LI + K G T A+ L M C+P+ YN +I + K + + +A
Sbjct: 165 DVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLC----KDRQVTEA 220
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
F +M KG+ P+I TYN L+ A V L E+ +S + PD+ ++N V
Sbjct: 221 FNLFSEMVTKGI---SPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTV 277
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+DA K G + E V+ +M +P+++T+ L+D + D+ +VF +++
Sbjct: 278 VDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGC 337
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P + ++N++I Y K + KA Y+F +M + P +TY +I + + + A
Sbjct: 338 MPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIA 397
Query: 382 IFDEL-------------------------------------SKLGKDMKVSTLNAMLEA 404
+F E+ S L D++V+ N ++
Sbjct: 398 LFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVN--NIAIDG 455
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
C G A LF N + G+ PD TY ++ + + + KL + M++NG N
Sbjct: 456 MCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLN 515
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 130/304 (42%), Gaps = 9/304 (2%)
Query: 163 LAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVT 222
A + +++ G +PD + + LI ++ K + +AL F KM G E +P++VT
Sbjct: 114 FAFSVLAKILKLGHQPDTATFTTLIRG-IYVEGK---IGEALHLFDKMIG-EGFRPDVVT 168
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y L+ + N L + + P+++ YN ++D+ K+ + E ++ S M
Sbjct: 169 YGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMV 228
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
+ PDI T+N LI + + + + ++ SK P + +FN+++ K
Sbjct: 229 TKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVT 288
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNA 400
+A V KM P+ +TY + M G+C + A ++FD + G V + N
Sbjct: 289 EAHDVVDKMIQRGVEPNVVTYTAL--MDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNT 346
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
++ YC +A LF + PD+ TY L + L M
Sbjct: 347 LINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACS 406
Query: 461 IVPN 464
+PN
Sbjct: 407 QIPN 410
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 133/348 (38%), Gaps = 40/348 (11%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA--------HLHT------ 193
Y+ +I + K Q A LFSEM G PD YN+LI A H+ T
Sbjct: 204 YNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMV 263
Query: 194 -----------RDKAKALAK------ALGYFQKM--KGMERCKPNIVTYNILLRACAQAR 234
AL K A KM +G+E PN+VTY L+
Sbjct: 264 DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVE---PNVVTYTALMDGHCLLS 320
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+D+ +F + P++ +YN +++ Y K I + + M + PD +T++
Sbjct: 321 EMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYS 380
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
LI + +F ++ + P L T+ ++ K R +A + + +
Sbjct: 381 TLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGS 440
Query: 355 KYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
P I + G C + AR++F LS G V T + M+ C GL
Sbjct: 441 NLDPDIQVNN--IAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLD 498
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
EA LF G T + Y + + + + N +LL+ M G
Sbjct: 499 EASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARG 546
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 108/247 (43%), Gaps = 5/247 (2%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ +F M GC P+ YN LI + K + + KA+ F +M E P+ VTY
Sbjct: 325 AVKVFDTMVCKGCMPNVISYNTLINGYC----KIQRIDKAMYLFGEMCRQELI-PDTVTY 379
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
+ L+ + ALF E+ P++ TY ++D KN + E ++L ++
Sbjct: 380 STLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEG 439
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+ PDI N+ ID + + +F +L +P + T++ MI + L +
Sbjct: 440 SNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDE 499
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A +F++M T + Y I + + SRA ++ E+ G ST+ ++
Sbjct: 500 ASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVK 559
Query: 404 AYCMNGL 410
+GL
Sbjct: 560 MLSDDGL 566
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 122/302 (40%), Gaps = 9/302 (2%)
Query: 171 MRNSGCRPDPSVYNALITAHL---HTRDKAKALA-----KALGYFQKMKGMERCKPNIVT 222
MR RP + +L+ L H R +K+L A+ F +M M+ P+ V
Sbjct: 5 MRRPSSRPSGTQMLSLLAHFLSLSHNRFHSKSLHFNTIDGAISSFNRMLRMQP-PPSTVD 63
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
+N LL + A+ ++ + +L ++ + P+IYT + +++++ + SVL+++
Sbjct: 64 FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
+PD TF LI + +F ++ +P + T+ ++I K
Sbjct: 124 KLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS 183
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
A + M P+ Y II V+ A +F E+ G + T N+++
Sbjct: 184 AAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLI 243
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
A C L + + PD ++ + A K ++ +M Q G+
Sbjct: 244 HALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVE 303
Query: 463 PN 464
PN
Sbjct: 304 PN 305
>gi|147859909|emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]
Length = 724
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 165/350 (47%), Gaps = 14/350 (4%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMW--LFSEMRNSGCR 177
++D + L + M++ Y +D YS +I + + ++ +M +++E+ +
Sbjct: 266 ARNDDLEKALNLMSRMRRD-GYPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIE 324
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
D + N +I + D +A++ F M P T ++ A A +
Sbjct: 325 LDGQLLNDIIVGFAKSGDVNRAMS-----FLAMVQGNGLSPKTATLVAVITALGNAGRTE 379
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ A+F+EL E L P YN ++ Y K G +K+ ES++S M+ + PD T++LLI
Sbjct: 380 EAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLI 439
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK-- 355
D+Y ++ V K + S +P F+ ++ +Y R +GK + FQ + M+
Sbjct: 440 DAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASY---RDRGKWQKSFQVLREMRNS 496
Query: 356 -YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+P Y +I +G C+ + A FD + G T N +++ +C +G +A
Sbjct: 497 GVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKA 556
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ LFE G +P ++TY ++ ++ + E V+ LL +M+ G++ N
Sbjct: 557 EELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLAN 606
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 146/303 (48%), Gaps = 15/303 (4%)
Query: 89 SFSDKEPLVRTLNKYVKVVRSEHCF-LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI 147
S D E +V + + EH + LL + + +W V + M+ ++ +
Sbjct: 412 SLKDAESIVSEMER-SGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEAS-GVRPNSYV 469
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+S+++A +G+ + + + EMRNSG PD YN +I T K L AL F
Sbjct: 470 FSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMI----DTFGKCNCLDHALATF 525
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M+ ME +P+ VT+N L+ ++ + ++ LF+ + ES +P TYN +++++G+
Sbjct: 526 DRMR-MEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGE 584
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
++++++L +M+S +++T+ L S QA + F+ + KP++
Sbjct: 585 QERWEDVKTLLGKMQSQGLLANVVTYTTLGLS---EQAIN----AFRVMRADGLKPSVLV 637
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
NS+I +G+ R +A V Q M P +TY ++ + + +++E++
Sbjct: 638 LNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMT 697
Query: 388 KLG 390
G
Sbjct: 698 LSG 700
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 148/352 (42%), Gaps = 37/352 (10%)
Query: 145 TGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKAL 204
T +I +G G+T A +F E++ G P YNAL+ ++ K +L A
Sbjct: 362 TATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYV----KTGSLKDAE 417
Query: 205 GYFQKMKGMERC--KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
+M ER P+ TY++L+ A A A + + KE+ S + P+ Y ++ ++
Sbjct: 418 SIVSEM---ERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRIL 474
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+Y G ++ VL M+++ PD +N++ID++GK D F + +
Sbjct: 475 ASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQ 534
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P T+N++I + K+ KAE +F+ M +P TY +I +G + + +
Sbjct: 535 PDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTL 594
Query: 383 FDELSKLGKDMKVST----------------------------LNAMLEAYCMNGLPTEA 414
++ G V T LN+++ A+ + EA
Sbjct: 595 LGKMQSQGLLANVVTYTTLGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEA 654
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
+ + + PD TY L KA + + V + + M +G P+++
Sbjct: 655 FSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPDRK 706
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 138/323 (42%), Gaps = 16/323 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D + + +I K G AM + ++ +G P + A+ITA A +A
Sbjct: 326 DGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITA----LGNAGRTEEA 381
Query: 204 LGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
F+++K G+ P YN LL+ + ++ ++ E+ S +PD +TY+ +
Sbjct: 382 EAIFEELKEGGL---MPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLL 438
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+DAY G + VL M+++ +P+ F+ ++ SY R + K QV + + +S
Sbjct: 439 IDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGV 498
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P +N MI +GK A F +M P +T+ +I + + ++A E
Sbjct: 499 SPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEE 558
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+F+ + + G +T N M+ ++ + L + G+ + T YT
Sbjct: 559 LFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVT-------YT 611
Query: 442 KANMKELVQKLLKRMEQNGIVPN 464
+ E + M +G+ P+
Sbjct: 612 TLGLSEQAINAFRVMRADGLKPS 634
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 113/255 (44%), Gaps = 7/255 (2%)
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y+IL+ A ++ + + F L P TYN ++ A +N +++ +++SRM+
Sbjct: 228 YSILIHALGRSEKLYEA---FLLSQRQTLTP--LTYNALIGACARNDDLEKALNLMSRMR 282
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDK--MEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
+ D + ++ +I S + D +++++ + K + N +I+ + K+
Sbjct: 283 RDGYPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGD 342
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
+A + +P T +IT G A IF+EL + G + NA
Sbjct: 343 VNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNA 402
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+L+ Y G +A+ + G +PD TY LL AY A E + +LK ME +G
Sbjct: 403 LLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASG 462
Query: 461 IVPNKRFFLEALETF 475
+ PN F L ++
Sbjct: 463 VRPNSYVFSRILASY 477
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 135/333 (40%), Gaps = 12/333 (3%)
Query: 134 WMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT 193
W+++ + +YS LI +G+ + A +L S+ + P YNALI A
Sbjct: 214 WLERHNLCFSYELLYSILIHALGRSEKLYEA-FLLSQRQTL----TPLTYNALIGACARN 268
Query: 194 RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ--VNALFKELHESIL 251
D L KAL +M+ + + V Y+ ++++ + D + ++ E+ +
Sbjct: 269 DD----LEKALNLMSRMR-RDGYPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKI 323
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
D N ++ + K+G + S L+ ++ N P T +I + G ++ E
Sbjct: 324 ELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEA 383
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+F+ L P +N+++ Y K AE + +M ++P TY +I Y
Sbjct: 384 IFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYA 443
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
AR + E+ G + +L +Y G ++ + N GV+PD
Sbjct: 444 NAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRH 503
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y ++ + K N + RM G+ P+
Sbjct: 504 FYNVMIDTFGKCNCLDHALATFDRMRMEGVQPD 536
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 150/333 (45%), Gaps = 20/333 (6%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
+ +I D YS LI + G AM +F E G + +YN L+ K
Sbjct: 350 KGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLV----------K 399
Query: 199 ALAK---ALGYFQKMKGM--ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP 253
L+K L Q MK M C P+I TYN+++ + + N + + P
Sbjct: 400 GLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIP 459
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
DI+T+N ++D Y K + + +L M S+ PD+IT+N L++ K + D + F
Sbjct: 460 DIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTF 519
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
K+++ P + T+N +I ++ K R +A +F++M TP +T +I G C
Sbjct: 520 KAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLIC--GLC 577
Query: 374 DN--VSRAREIFDELSKLGK-DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
N + +A E+F + K K + N M+ A+C + A+ LF PD+
Sbjct: 578 SNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDN 637
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
TY+++ +Y K +L L G+VP
Sbjct: 638 YTYRVMIDSYCKTGNIDLAHTFLLENISKGLVP 670
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 169/405 (41%), Gaps = 42/405 (10%)
Query: 71 GRKSEELESKELVRVLMR-SFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCL 129
GRK + +E V V R F D EP V++ N + ++ +
Sbjct: 87 GRKGK---VQEAVNVFERMDFYDCEPSVQSYNAIMNIL---------------------V 122
Query: 130 EVFRWMQKQRWYI--ADTGIYSKL------IAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
E + Q + Y+ D GIY + + G+ A+ L + M GC +
Sbjct: 123 EYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAV 182
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
Y A+I+ K +A F +M C P+I+T+N L+ + NV +
Sbjct: 183 SYCAVISGFY----KENCQIEAYHLFDEMLKQGIC-PDILTFNKLIHVLCKKGNVQESEK 237
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
LF ++ + + P+++T+N + + G I E +L + S PD+I++N LI +
Sbjct: 238 LFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFC 297
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
K + E +++S +P T+N++I + KA + A+ + + + P
Sbjct: 298 KHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEF 357
Query: 362 TYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
TY +I G C+ +++RA +F E + G + N +++ GL +A L +
Sbjct: 358 TYSSLIN--GLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMK 415
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ G +PD TY L+ K +L G +P+
Sbjct: 416 DMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPD 460
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 138/317 (43%), Gaps = 5/317 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y +I+ K+ A LF EM G PD +N LI H K + ++ F
Sbjct: 184 YCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLI----HVLCKKGNVQESEKLF 239
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K+ C PN+ T+NI ++ + +D+ L + + L PD+ +YN ++ + K
Sbjct: 240 SKVMKRGVC-PNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCK 298
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ + E E L +M ++ +P+ T+N +I+ + K +++ + M P T
Sbjct: 299 HSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFT 358
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
++S+I +A VF + + S I Y ++ V +A ++ ++
Sbjct: 359 YSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMM 418
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ G + T N ++ C G ++A+ + ++ G PD T+ L Y K +
Sbjct: 419 EHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMD 478
Query: 448 LVQKLLKRMEQNGIVPN 464
++L M +GI P+
Sbjct: 479 KAIEILDTMLSHGITPD 495
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 141/342 (41%), Gaps = 7/342 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + L K LQ L++ + M + D Y+ ++ + K G A + ++
Sbjct: 397 LVKGLSKQGLVLQALQLMKDMMEHGCS-PDIWTYNLVVNGLCKMGCLSDANGILNDAIAK 455
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC PD +N LI + R+ + KA+ M P+++TYN LL +AR
Sbjct: 456 GCIPDIFTFNTLIDGYCKQRN----MDKAIEILDTMLS-HGITPDVITYNTLLNGLCKAR 510
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+D V FK + E P+I TYN +++++ K+ + E + MK+ PDI+T
Sbjct: 511 KLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLC 570
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHS-KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
LI DK ++F ++ K + FN MI + + AE +F KM
Sbjct: 571 TLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGG 630
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P TY +I Y N+ A E G +T +L C+ +E
Sbjct: 631 SDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSE 690
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
A ++ G+ P+ A K +V+ LLK+
Sbjct: 691 AVVIINLMVQNGIVPEEVNSIFEADKKEVAAPKIVVEYLLKK 732
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 152/355 (42%), Gaps = 6/355 (1%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
K + ++ +F M KQ D ++KLI V+ KKG + + LFS++ G P+
Sbjct: 193 KENCQIEAYHLFDEMLKQ-GICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNL 251
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
+N I + A+ +A + + E P++++YN L+ + + +
Sbjct: 252 FTFNIFIQGLC----RKGAIDEAARLLESIVS-EGLTPDVISYNTLICGFCKHSKLVEAE 306
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
++ S + P+ +TYN +++ + K GM++ + +L PD T++ LI+
Sbjct: 307 CYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGL 366
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
++ VF M K ++ +N+++ K L +A + + M +P
Sbjct: 367 CNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDI 426
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
TY ++ +S A I ++ G + T N +++ YC +A + +
Sbjct: 427 WTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDT 486
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ G+TPD TY L KA + V K M + G PN + +E+F
Sbjct: 487 MLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESF 541
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 165/399 (41%), Gaps = 34/399 (8%)
Query: 97 VRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMG 156
V+T + + + + C + E+LG K+ +V M+K G+Y ++ G
Sbjct: 30 VKTEDGFKHTLETYKC--MIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYG 87
Query: 157 KKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT----------AH-LHTRDKAKAL----- 200
+KG+ + A+ +F M C P YNA++ AH ++ R K +
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVY 147
Query: 201 ---------------AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
AL M G + C+ N V+Y ++ + + LF E
Sbjct: 148 THTIRMKSFCITGRPTAALRLLNNMPG-QGCEFNAVSYCAVISGFYKENCQIEAYHLFDE 206
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ + + PDI T+N ++ K G ++E E + S++ P++ TFN+ I ++ A
Sbjct: 207 MLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGA 266
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
D+ ++ +S++ P + ++N++I + K +AE KM P+ TY
Sbjct: 267 IDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNT 326
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
II + + A +I + G T ++++ C +G A +F + G
Sbjct: 327 IINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKG 386
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y L K +K + +L+K M ++G P+
Sbjct: 387 FKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPD 425
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 121/284 (42%), Gaps = 10/284 (3%)
Query: 192 HTRDKAKALAKALGYFQKMKGMERC----KPNIVT------YNILLRACAQARNVDQVNA 241
HT + K + + LG K + ME + N+ + Y ++R + V +
Sbjct: 38 HTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVN 97
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
+F+ + P + +YN +M+ + G + V RMK PD+ T + + S+
Sbjct: 98 VFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFC 157
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
++ ++ + ++ ++I + K Q +A ++F +M P +
Sbjct: 158 ITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDIL 217
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
T+ +I + NV + ++F ++ K G + T N ++ C G EA L E+
Sbjct: 218 TFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESI 277
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+ G+TPD +Y L + K + + L +M +G+ PN+
Sbjct: 278 VSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNE 321
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 173/380 (45%), Gaps = 51/380 (13%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
KS + +E+ R M+++ + D YS +I + K G A LF+EM G + D
Sbjct: 240 KSGQTALAMELLRKMEERNIKL-DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 298
Query: 181 SVYNALITAHLHT---RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
YN LI + D AK L + + PN+VT+++L+ + + +
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIK--------RKISPNVVTFSVLIDSFVKEGKLR 350
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ + L KE+ + +AP+ TYN ++D + K ++E ++ M S C PDI+TFN+LI
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+ Y K D ++F+ + T+N+++ + ++ A+ +FQ+M + +
Sbjct: 411 NGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVR 470
Query: 358 PSFITYECIITMYGYCDN--VSRAREIFDEL--SKLGKDMKVSTL--------------- 398
P ++Y+ I + G CDN + +A EIF ++ SK+ D+ + +
Sbjct: 471 PDIVSYK--ILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAW 528
Query: 399 ------------------NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
N M+ C ++AD+LF G PD TY +L +A+
Sbjct: 529 DLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAH 588
Query: 441 TKANMKELVQKLLKRMEQNG 460
+ +L++ M+ +G
Sbjct: 589 LGDDDATTAAELIEEMKSSG 608
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 137/302 (45%), Gaps = 7/302 (2%)
Query: 159 GQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CK 217
G+ A+ L M +G +P+ Y + L+ K+ A A+ +KM+ ER K
Sbjct: 207 GKVSDAVVLIDRMVETGFQPNEVTYGPV----LNVMCKSGQTALAMELLRKME--ERNIK 260
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
+ V Y+I++ + ++D LF E+ DI TYN ++ + G + +
Sbjct: 261 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKL 320
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L M + P+++TF++LIDS+ K + +Q+ K +M P T+NS+I + K
Sbjct: 321 LRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCK 380
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
+A + M + P +T+ +I Y + + E+F E+S G T
Sbjct: 381 ENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVT 440
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
N +++ +C +G A LF+ + V PD +YK+L E ++ ++E
Sbjct: 441 YNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIE 500
Query: 458 QN 459
++
Sbjct: 501 KS 502
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 132/289 (45%), Gaps = 6/289 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + K K + ++ + M QR +T Y+ LI K+ + A+ + M +
Sbjct: 338 VLIDSFVKEGKLREADQLLKEMM-QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMIS 396
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
GC PD +N LI + KA + L F++M + N VTYN L++ Q+
Sbjct: 397 KGCDPDIMTFNILINGYC----KANRIDDGLELFREMS-LRGVIANTVTYNTLVQGFCQS 451
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
++ LF+E+ + PDI +Y ++D NG +++ + +++ ++ + DI +
Sbjct: 452 GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIY 511
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
++I D +F SL K +N MI + KA+ +F+KMT
Sbjct: 512 MIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTE 571
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
+ P +TY +I + D+ + A E+ +E+ G VST+ ++
Sbjct: 572 EGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI 620
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 130/305 (42%), Gaps = 7/305 (2%)
Query: 175 GCRPDPSVYNALITAH-LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G PD ++N L+ L R +++AL +M M KP ++T N L+
Sbjct: 153 GYEPDTVIFNTLLNGLCLECR-----VSEALELVDRMVEMGH-KPTLITLNTLVNGLCLN 206
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
V L + E+ P+ TY V++ K+G +L +M+ K D + +
Sbjct: 207 GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+++ID K + D +F + K + T+N++I + A + + M
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
K +P+ +T+ +I + + A ++ E+ + G T N++++ +C E
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
A + + + G PD T+ +L Y KAN + +L + M G++ N + ++
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Query: 474 TFSSS 478
F S
Sbjct: 447 GFCQS 451
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 146/328 (44%), Gaps = 13/328 (3%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
Y DT I++ L+ + + + A+ L M G +P N L+ L K +
Sbjct: 154 YEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNG-LCLNGK---V 209
Query: 201 AKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
+ A+ +M G + PN VTY +L ++ L +++ E + D Y
Sbjct: 210 SDAVVLIDRMVETGFQ---PNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
+ ++D K+G + ++ + M+ K DIIT+N LI + +D ++ + ++
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNV 376
K P + TF+ +I ++ K +A+ + ++M P+ ITY +I G+C + +
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID--GFCKENRL 384
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
A ++ D + G D + T N ++ YC + LF GV ++ TY L
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ + ++ E+ +KL + M + P+
Sbjct: 445 VQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 115/285 (40%), Gaps = 41/285 (14%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P ++ +N L A A+ + + V AL K++ +A IYT + +++ + + + S
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
+ ++ +PD + FN L++ + ++ ++ KPTL T N+++
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLV---NG 202
Query: 338 ARLQGK---AEYVFQKMTAMKYTPSFITYECI---------------------------- 366
L GK A + +M + P+ +TY +
Sbjct: 203 LCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLD 262
Query: 367 -----ITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
I + G C + + A +F+E+ G + T N ++ +C G + L
Sbjct: 263 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLR 322
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ ++P+ T+ +L ++ K +LLK M Q GI PN
Sbjct: 323 DMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 77/192 (40%), Gaps = 39/192 (20%)
Query: 307 DKMEQVFKSLMHSKEKPTLPTFN----------------------------------SMI 332
D +F+ ++ S+ PT+ FN S++
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 333 IN-YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKL 389
IN + + R A K+ + Y P + + ++ G C VS A E+ D + ++
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLN--GLCLECRVSEALELVDRMVEM 187
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
G + TLN ++ C+NG ++A +L + G P+ TY + K+ L
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 450 QKLLKRMEQNGI 461
+LL++ME+ I
Sbjct: 248 MELLRKMEERNI 259
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 33/209 (15%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
K+++ LE+FR M R IA+T Y+ L+ + G+ +A LF EM + RPD
Sbjct: 415 KANRIDDGLELFREMS-LRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMK-------------GM-------------- 213
Y L+ + KAL + G +K K GM
Sbjct: 474 VSYKILLDGLCDNGELEKAL-EIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFC 532
Query: 214 ----ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG 269
+ K + YNI++ + ++ + + LF+++ E APD TYN ++ A+ +
Sbjct: 533 SLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDD 592
Query: 270 MIKEMESVLSRMKSNQCKPDIITFNLLID 298
++ MKS+ D+ T ++I+
Sbjct: 593 DATTAAELIEEMKSSGFPADVSTVKMVIN 621
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 6/171 (3%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L + + + LE+F ++K + + D GIY +I M + A LF +
Sbjct: 478 ILLDGLCDNGELEKALEIFGKIEKSKMEL-DIGIYMIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G + D YN +I+ L +D +L+KA F+KM E P+ +TYNIL+RA
Sbjct: 537 KGVKLDARAYNIMIS-ELCRKD---SLSKADILFRKMTE-EGHAPDELTYNILIRAHLGD 591
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
+ L +E+ S D+ T V++ + K +LS +++
Sbjct: 592 DDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDMLSTTRAS 642
>gi|224141335|ref|XP_002324029.1| predicted protein [Populus trichocarpa]
gi|222867031|gb|EEF04162.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 139/278 (50%)
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
++L + + R P++ YN++LR +A+ D + LF E+ LAPD YTY+ +
Sbjct: 89 RSLALLDWINDIARYSPSVFAYNVVLRNVLRAKQWDHAHGLFDEMRNRALAPDRYTYSTL 148
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ +GK GM L +M+ ++ D++ ++ LI+ K + K +F L S
Sbjct: 149 ITHFGKAGMFDASLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGI 208
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P L +NSMI +GKA+L +A+ + ++M + P ++Y ++++Y + A
Sbjct: 209 MPDLVAYNSMINVFGKAKLFREAKLLMKEMREVGVMPDTVSYSTLLSVYVENEKFVEALS 268
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+F E+++ + ++T N M++ Y + EAD LF + MG+ P+ +Y L + Y
Sbjct: 269 VFAEMNEAKCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYG 328
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSL 479
+ + L + M++ I N + ++ + SL
Sbjct: 329 ETELFGEAIHLFRLMQKKDIEQNVVTYNTMIKVYGKSL 366
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 160/343 (46%), Gaps = 5/343 (1%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
+ + W + L + W+ Y Y+ ++ + + Q A LF EMRN P
Sbjct: 81 ISRESDWQRSLALLDWINDIARYSPSVFAYNVVLRNVLRAKQWDHAHGLFDEMRNRALAP 140
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
D Y+ LIT H KA +L + Q+M+ +R ++V Y+ L+ + + +
Sbjct: 141 DRYTYSTLIT-HF---GKAGMFDASLFWLQQME-QDRVSGDLVLYSNLIELSRKLCDYSK 195
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
++F L S + PD+ YN +++ +GK + +E + ++ M+ PD ++++ L+
Sbjct: 196 AISIFMRLKRSGIMPDLVAYNSMINVFGKAKLFREAKLLMKEMREVGVMPDTVSYSTLLS 255
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
Y + + F + VF + +K L T N MI YG+ + +A+ +F M M P
Sbjct: 256 VYVENEKFVEALSVFAEMNEAKCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEP 315
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+ ++Y ++ +YG + A +F + K + V T N M++ Y + +A L
Sbjct: 316 NVVSYNTLLRVYGETELFGEAIHLFRLMQKKDIEQNVVTYNTMIKVYGKSLEHEKATNLM 375
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ N G+ P++ TY + + KA + L +++ +G+
Sbjct: 376 QEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGV 418
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 150/315 (47%), Gaps = 12/315 (3%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
WLQ +E Q D +YS LI + K A+ +F ++ SG PD YN
Sbjct: 164 WLQQME-------QDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGIMPDLVAYN 216
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
++I KAK +A ++M+ + P+ V+Y+ LL + + ++F
Sbjct: 217 SMINVF----GKAKLFREAKLLMKEMREVG-VMPDTVSYSTLLSVYVENEKFVEALSVFA 271
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
E++E+ D+ T N ++D YG+ M KE + + M+ +P+++++N L+ YG+ +
Sbjct: 272 EMNEAKCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGETE 331
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
F + +F+ + + + T+N+MI YGK+ KA + Q+M P+ ITY
Sbjct: 332 LFGEAIHLFRLMQKKDIEQNVVTYNTMIKVYGKSLEHEKATNLMQEMQNRGIEPNAITYS 391
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
II+++G + RA +F +L G ++ M+ AY +GL A L +
Sbjct: 392 TIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERSGLVAHAKRLLHELKHP 451
Query: 425 GVTPDSSTYKLLYKA 439
P + K+L +A
Sbjct: 452 DSIPRETAIKILARA 466
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 160/345 (46%), Gaps = 6/345 (1%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
++ +W +F M + R D YS LI GK G +++ +M D
Sbjct: 119 RAKQWDHAHGLFDEM-RNRALAPDRYTYSTLITHFGKAGMFDASLFWLQQMEQDRVSGDL 177
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
+Y+ LI D +KA++ F ++K P++V YN ++ +A+ +
Sbjct: 178 VLYSNLIELSRKLCDYSKAIS----IFMRLKR-SGIMPDLVAYNSMINVFGKAKLFREAK 232
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
L KE+ E + PD +Y+ ++ Y +N E SV + M +C D+ T N++ID Y
Sbjct: 233 LLMKEMREVGVMPDTVSYSTLLSVYVENEKFVEALSVFAEMNEAKCPLDLTTCNVMIDVY 292
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
G+ + +++F S+ +P + ++N+++ YG+ L G+A ++F+ M +
Sbjct: 293 GQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFGEAIHLFRLMQKKDIEQNV 352
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
+TY +I +YG +A + E+ G + T + ++ + G A +LF+
Sbjct: 353 VTYNTMIKVYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQK 412
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+ GV D Y+ + AY ++ + ++LL ++ +P +
Sbjct: 413 LRSSGVEIDQVLYQTMIVAYERSGLVAHAKRLLHELKHPDSIPRE 457
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 152/328 (46%), Gaps = 10/328 (3%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ DT YS L++V + + A+ +F+EM + C D + N +I + D AK
Sbjct: 244 MPDTVSYSTLLSVYVENEKFVEALSVFAEMNEAKCPLDLTTCNVMIDVYGQL-DMAKEAD 302
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+ +KM G+E PN+V+YN LLR + + LF+ + + + ++ TYN +
Sbjct: 303 RLFWSMRKM-GIE---PNVVSYNTLLRVYGETELFGEAIHLFRLMQKKDIEQNVVTYNTM 358
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ YGK+ ++ +++ M++ +P+ IT++ +I +GK D+ +F+ L S
Sbjct: 359 IKVYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGV 418
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
+ + +MI+ Y ++ L A+ + ++ P I E I + + A
Sbjct: 419 EIDQVLYQTMIVAYERSGLVAHAKRLLHELK----HPDSIPRETAIKILARAGRIEEATW 474
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+F + G+ +S M++ + N P +FE G PDS+ L+ AY
Sbjct: 475 VFRQAFDAGEVKDISVFGCMVDLFSRNRKPANVIEVFEKMRGAGYFPDSNVIALVLNAYG 534
Query: 442 KANMKELVQKLLKRM-EQNGIVPNKRFF 468
K + E L K M E+ + P++ F
Sbjct: 535 KLHEFEKADALYKEMQEEECVFPDEVHF 562
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 174/423 (41%), Gaps = 46/423 (10%)
Query: 81 ELVRVLMRS--FSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQ 138
+L++ +MR D + + + E FLLF+E+ K
Sbjct: 209 QLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM-----------------KM 251
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
D Y+ LI K G A WLF EMR+ GC P Y ALI A+L KAK
Sbjct: 252 VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYL----KAK 307
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL------------ 246
+ +A F +M C+PN VTY L+ +A N+ + ++ +L
Sbjct: 308 QVPQANDIFHRMVD-AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFY 366
Query: 247 ----HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
LAP++ TY ++D K + +L M S+ C+P+ I ++ LID + K
Sbjct: 367 FPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCK 426
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
D ++VF + P++ T+ S+I K A V +M TP+ +T
Sbjct: 427 AGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVT 486
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL---LFE 419
Y +I +A ++ + + G V T A+++ G + DL LF
Sbjct: 487 YTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL---GKAGKIDLSLDLFT 543
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSL 479
G +P+ TY++L A + + + LL M+Q + + A++ FS S
Sbjct: 544 QMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSF 603
Query: 480 AGS 482
S
Sbjct: 604 IAS 606
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 121/276 (43%), Gaps = 18/276 (6%)
Query: 207 FQKMKGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
FQ +K M R P+ TY+ ++ A V++ LF+E+ + PD+YTY ++D+
Sbjct: 208 FQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDS 267
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ K G+I++ + + M+S C P ++T+ LI +Y K + + +F ++ + +P
Sbjct: 268 FCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 327
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMK----------------YTPSFITYECIIT 368
T+ +++ KA KA V+ K+ P+ +TY ++
Sbjct: 328 DVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVD 387
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
V A E+ D + G + +A+++ +C G A +F G P
Sbjct: 388 GLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLP 447
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
TY L K +L K+L +M ++ PN
Sbjct: 448 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPN 483
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 152/380 (40%), Gaps = 69/380 (18%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
I + Y L++ KK Q + + M GC P+PS++N+L+ ++ + +D A A
Sbjct: 74 IPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYA-- 131
Query: 202 KALGYFQKMKGMER--CKPNIVTYNILLRA-CAQAR------------------------ 234
++ + M C P V YNI + + C Q +
Sbjct: 132 -----YKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVL 186
Query: 235 ---NV-------------DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
NV D+ L KE+ PD TY+ V+ +++ +
Sbjct: 187 NKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLF 246
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
MK PD+ T+ +LIDS+ K ++ + +F+ + PT+ T+ ++I Y KA
Sbjct: 247 QEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKA 306
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
+ +A +F +M P+ +TY ++ N+S+A E++ +L + T
Sbjct: 307 KQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL--------IGTS 358
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
++ ++D F + P+ TY L KA+ + +LL M
Sbjct: 359 DS-----------ADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 407
Query: 459 NGIVPNKRFFLEALETFSSS 478
+G PN + ++ F +
Sbjct: 408 SGCEPNHIVYDALIDGFCKA 427
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 123/297 (41%), Gaps = 13/297 (4%)
Query: 177 RPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
R D + L T + +A +A+ + +M+ C PN+VTY LL + + +
Sbjct: 35 REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMR-CNSCIPNVVTYRTLLSGFLKKKQL 93
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
+ + P+ +N ++ +Y +L+RM + C P + +N+
Sbjct: 94 GWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIF 153
Query: 297 IDSYGKRQA------FDKMEQVFKSLMHSK---EKPTLPTFNSMIINYGKARLQGKAEYV 347
I S ++ D E+++ ++ + K + F + GK KA +
Sbjct: 154 IGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFD---KAFQL 210
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
++M + P TY +IT + V +A +F E+ +G V T +++++C
Sbjct: 211 IKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCK 270
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
GL +A LFE ++G +P TY L AY KA + RM G PN
Sbjct: 271 AGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPN 327
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 107/276 (38%), Gaps = 45/276 (16%)
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
C + R D ++ + +E + + +G+M+A E S L RM+ N C P+
Sbjct: 21 CKEGRWADALDMIEREDFKLDTVLCTHMISGLMEA----SYFDEAMSFLHRMRCNSCIPN 76
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
++T+ L+ + K++ +++ +M P FNS++ +Y + A +
Sbjct: 77 VVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLN 136
Query: 350 KMTAMKYTPSFITYECIIT-------------------MYG------------------- 371
+MT P ++ Y I +YG
Sbjct: 137 RMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFAR 196
Query: 372 -YC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
C +A ++ E+ + G ST + ++ C +A LLF+ +GVTP
Sbjct: 197 CLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTP 256
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
D TY +L ++ KA + E Q L + M G P
Sbjct: 257 DVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPT 292
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 161/373 (43%), Gaps = 46/373 (12%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
I D + LI + G+T+ A + + NSG PD YN LI + K+ +
Sbjct: 138 IPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYC----KSGEID 193
Query: 202 KALGYFQKM-----------------------KGME--------RCKPNIVTYNILLRAC 230
KAL ++M + ME C P+++TY IL+ A
Sbjct: 194 KALEVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEAT 253
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
V Q L E+ + PD+ TYN +++ K G + E L+ M S CKP++
Sbjct: 254 CNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNV 313
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
IT N+++ S + E++ ++ P++ TFN +I + RL G+A V +K
Sbjct: 314 ITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEK 373
Query: 351 MTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
M P+ ++Y + ++G+C + RA E + + G + T N +L A C +
Sbjct: 374 MPKHGCVPNSLSYNPL--LHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKD 431
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G A + + G +P TY + TK E +LL+ M + G+ P+
Sbjct: 432 GKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPD---- 487
Query: 469 LEALETFSSSLAG 481
+ T+S+ L G
Sbjct: 488 ---IITYSTLLRG 497
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 155/363 (42%), Gaps = 8/363 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ L S K + +EV Q QR D Y+ LI AM L EMR
Sbjct: 214 ILRSLCDSGKLKEAMEVLDR-QLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKK 272
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQA 233
GC+PD YN LI K L +A+ + M CKPN++T+NI+LR+ C+
Sbjct: 273 GCKPDVVTYNVLINGIC----KEGRLDEAIKFLNNMPSYG-CKPNVITHNIILRSMCSTG 327
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
R +D L ++ +P + T+N +++ + ++ VL +M + C P+ +++
Sbjct: 328 RWMD-AERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSY 386
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N L+ + + + D+ + + ++ P + T+N+++ K A + ++++
Sbjct: 387 NPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSS 446
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
+P ITY +I A E+ +E+ + G + T + +L G E
Sbjct: 447 KGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDE 506
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
A +F + + + P + TY + KA L M + G P + + +E
Sbjct: 507 AIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIE 566
Query: 474 TFS 476
+
Sbjct: 567 GIA 569
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 148/346 (42%), Gaps = 14/346 (4%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIA-DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
G+ DK L+ LE R +A D Y+ ++ + G+ + AM + C P
Sbjct: 190 GEIDKALEVLE--------RMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYP 241
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
D Y LI A + +A+ K L +K KG CKP++VTYN+L+ + +D+
Sbjct: 242 DVITYTILIEATCNDSGVGQAM-KLLDEMRK-KG---CKPDVVTYNVLINGICKEGRLDE 296
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+ P++ T+N ++ + G + E +LS M C P ++TFN+LI+
Sbjct: 297 AIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILIN 356
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
+++ + V + + P ++N ++ + + + +A + M + P
Sbjct: 357 FLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYP 416
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+TY ++T V A EI ++LS G + T N +++ G A L
Sbjct: 417 DIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELL 476
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
E G+ PD TY L + + + K+ ME I P+
Sbjct: 477 EEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPS 522
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 83/200 (41%), Gaps = 7/200 (3%)
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+NG ++E L RM PD+I LI + + K ++ + L +S P +
Sbjct: 118 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVI 177
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFD 384
T+N +I Y K+ KA V ++M+ P +TY I + CD+ + A E+ D
Sbjct: 178 TYNVLIGGYCKSGEIDKALEVLERMSV---APDVVTYNTI--LRSLCDSGKLKEAMEVLD 232
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ V T ++EA C + +A L + G PD TY +L K
Sbjct: 233 RQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEG 292
Query: 445 MKELVQKLLKRMEQNGIVPN 464
+ K L M G PN
Sbjct: 293 RLDEAIKFLNNMPSYGCKPN 312
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 167/347 (48%), Gaps = 23/347 (6%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT---RDKA 197
Y + +Y+ LI + K G+ +A+ L +EM G D YN L+T ++ D A
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 198 KALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+ L M+R P++VT+ L+ + N+D+ L+KE+ +S + P+
Sbjct: 232 RMLRDM---------MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TYN +++ +G + + + M S C P+++T+N LI + K + D+ ++F+ +
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Query: 317 MHSKEKPTLPTFNSMIINY---GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
+ T+N++I Y GK R+ A +F M + + TP IT+ CI+ ++G C
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRV---ALDIFCWMVSRRVTPDIITH-CIL-LHGLC 397
Query: 374 DN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
N + A FD++ + K + + N M+ C +A LF GV PD+
Sbjct: 398 VNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDAR 457
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
TY ++ K + +L++RM++ GI+ + LE SSS
Sbjct: 458 TYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSSS 504
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/377 (20%), Positives = 149/377 (39%), Gaps = 24/377 (6%)
Query: 88 RSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI 147
R+FSD +RT ++ +R E F LF E+ S ++
Sbjct: 33 RAFSDYREKLRT--GFLHSIRFEDAFALFFEMVHSQPLPSIVD----------------- 73
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+++L+ + ++ +M G D + LI H + L+ AL
Sbjct: 74 FTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI----HCFCRCSRLSFALSVL 129
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
KM + +P+IVT+ LL + +L + +S P++ YN ++D K
Sbjct: 130 GKMMKLGY-EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
NG + +L+ M+ D++T+N L+ + ++ + +M P + T
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
F ++I + K +A+ ++++M P+ +TY II + A++ FD ++
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G V T N ++ +C + E LF+ G D TY L Y +
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLR 368
Query: 448 LVQKLLKRMEQNGIVPN 464
+ + M + P+
Sbjct: 369 VALDIFCWMVSRRVTPD 385
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/202 (19%), Positives = 80/202 (39%), Gaps = 4/202 (1%)
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
++ M +Q P I+ F L+ + + ++ + + + L +F +I +
Sbjct: 57 ALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCF 116
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDM 393
+ A V KM + Y PS +T+ + ++G+C + + A + + K G +
Sbjct: 117 CRCSRLSFALSVLGKMMKLGYEPSIVTFGSL--LHGFCLVNRIGDAFSLVILMVKSGYEP 174
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
V N +++ C NG A L G+ D TY L + ++L
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 454 KRMEQNGIVPNKRFFLEALETF 475
+ M + I P+ F ++ F
Sbjct: 235 RDMMKRSINPDVVTFTALIDVF 256
>gi|168047776|ref|XP_001776345.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672305|gb|EDQ58844.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 168/366 (45%), Gaps = 11/366 (3%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ E L D Q L FRW++ + D ++ L +G+ A+ F +
Sbjct: 39 IILEALCGDDLTEQVLSFFRWVRLHEPCLCDPRSFTILFTFLGRMAMPDQALVFFGMLPK 98
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
VYN LIT + L L +++ P+ VT+++L+ + +
Sbjct: 99 DKQFHSVHVYNTLITCLTNCNRYDLELYHNLAFYEVF-------PDSVTFSVLMNSAVKG 151
Query: 234 R-NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
++ +V AL++++ + ++P + + + A+ G +KE + + M+ +++
Sbjct: 152 GGSLKEVWALYQDMVQRGISPSVSVFGTFIKAFCDAGRLKEALLITTEMEKLNVPFNVVI 211
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK---AEYVFQ 349
+N+LID+YG+ ++ E + + +P + T+N++I Y +A+ + + AE + +
Sbjct: 212 YNILIDAYGRVGQLEEAEGLMTEMRERGIQPNVGTYNALITGYLEAKPKRQFVVAEGLIE 271
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
+M A P +T+ ++ YG+ +A ++F+ + G + A++ AY
Sbjct: 272 EMEASGLYPDVVTFTMLLGAYGHEGLTEQAEQVFNRMKARGVQPNSYSYTALINAYAERR 331
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFL 469
P +A FE GV P TY L AY +A E+VQ + K M+ G V + ++
Sbjct: 332 CPEKAARAFEMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVEGCVATRVTYM 391
Query: 470 EALETF 475
L+ F
Sbjct: 392 TILDAF 397
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 149/333 (44%), Gaps = 10/333 (3%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
QR ++ I G+ + A+ + +EM + +YN LI A+ +
Sbjct: 167 QRGISPSVSVFGTFIKAFCDAGRLKEALLITTEMEKLNVPFNVVIYNILIDAY----GRV 222
Query: 198 KALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQ---VNALFKELHESILAP 253
L +A G +M+ ER +PN+ TYN L+ +A+ Q L +E+ S L P
Sbjct: 223 GQLEEAEGLMTEMR--ERGIQPNVGTYNALITGYLEAKPKRQFVVAEGLIEEMEASGLYP 280
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
D+ T+ ++ AYG G+ ++ E V +RMK+ +P+ ++ LI++Y +R+ +K + F
Sbjct: 281 DVVTFTMLLGAYGHEGLTEQAEQVFNRMKARGVQPNSYSYTALINAYAERRCPEKAARAF 340
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
+ + PT+ T+ +++ Y +A + V++ M + +TY I+ +
Sbjct: 341 EMIRKQGVNPTVETYTALLDAYRRAGDLEMVQAVWKSMKVEGCVATRVTYMTILDAFQKQ 400
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
AR++ +E G + N +L +Y G +A + G PDS TY
Sbjct: 401 GRYKEARDLIEEFKNQGHKPDLMVYNMLLNSYMRGGRHVKASDILLEMKTAGFLPDSFTY 460
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
L + + + K + M G +P+ +
Sbjct: 461 CTLIYGFLRVRDQTKALKYHREMMNRGQLPDPK 493
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 164/365 (44%), Gaps = 12/365 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ L S K Q +EV M ++ Y D Y+ LI + AM L EMR+
Sbjct: 210 ILRSLCDSGKLKQAMEVLDRMLQRDCY-PDVITYTILIEATCRDSGVGHAMKLLDEMRDR 268
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQA 233
GC PD YN L+ K L +A+ + M C+PN++T+NI+LR+ C+
Sbjct: 269 GCTPDVVTYNVLVNGIC----KEGRLDEAIKFLNDMPS-SGCQPNVITHNIILRSMCSTG 323
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
R +D L ++ +P + T+N +++ + G++ +L +M + C+P+ +++
Sbjct: 324 RWMD-AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N L+ + K + D+ + + ++ P + T+N+M+ K A + ++++
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL--NAMLEAYCMNGLP 411
+P ITY +I +A ++ DE+ KD+K T+ ++++ G
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR--AKDLKPDTITYSSLVGGLSREGKV 500
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
EA F MG+ P++ T+ + K+ + L M G PN+ +
Sbjct: 501 DEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTIL 560
Query: 472 LETFS 476
+E +
Sbjct: 561 IEGLA 565
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 167/378 (44%), Gaps = 26/378 (6%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
F LGK+ K + LE+ + D Y+ +I+ K G+ A+ + M S
Sbjct: 147 FCRLGKTRKAAKILEILEG----SGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS- 201
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQAR 234
PD YN ++ + D K L +A+ +M ++R C P+++TY IL+ A +
Sbjct: 202 --PDVVTYNTILRSLC---DSGK-LKQAMEVLDRM--LQRDCYPDVITYTILIEATCRDS 253
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
V L E+ + PD+ TYN +++ K G + E L+ M S+ C+P++IT N
Sbjct: 254 GVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN 313
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+++ S + E++ ++ P++ TFN +I + L G+A + +KM
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 355 KYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
P+ ++Y + ++G+C + RA E + + G + T N ML A C +G
Sbjct: 374 GCQPNSLSYNPL--LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
+A + + G +P TY + KA KLL M + P+ +
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY---- 487
Query: 473 ETFSSSLAGSQSGSAKTD 490
SSL G S K D
Sbjct: 488 ----SSLVGGLSREGKVD 501
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 139/325 (42%), Gaps = 5/325 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ ++ + G+ + AM + M C PD Y LI A RD + A
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEAT--CRDSG--VGHA 258
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ +M+ C P++VTYN+L+ + +D+ ++ S P++ T+N ++
Sbjct: 259 MKLLDEMRD-RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ G + E +L+ M P ++TFN+LI+ ++ + + + + +P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
++N ++ + K + +A ++M + P +TY ++T V A EI
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
++LS G + T N +++ G +A L + + PD+ TY L ++
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFF 468
+ K E+ GI PN F
Sbjct: 498 GKVDEAIKFFHEFERMGIRPNAVTF 522
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 140/335 (41%), Gaps = 36/335 (10%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT--- 193
+ R D Y+ L+ + K+G+ A+ ++M +SGC+P+ +N ++ + T
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 194 RDKAKALA----------------------------KALGYFQKMKGMERCKPNIVTYNI 225
D K LA +A+ +KM C+PN ++YN
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP-QHGCQPNSLSYNP 384
Query: 226 LLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ 285
LL + + +D+ + + PDI TYN ++ A K+G +++ +L+++ S
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
C P +IT+N +ID K K ++ + KP T++S++ + +A
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLE 403
F + M P+ +T+ I M G C + RA + + G ++ ++E
Sbjct: 505 KFFHEFERMGIRPNAVTFNSI--MLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIE 562
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
G+ EA L N G+ SS ++ K
Sbjct: 563 GLAYEGMAKEALELLNELCNKGLMKKSSAEQVAGK 597
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 109/260 (41%), Gaps = 7/260 (2%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+I+ L+R + + + + L S PD+ TYN ++ Y K G I SV
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L RM + PD++T+N ++ S + +V ++ P + T+ +I +
Sbjct: 195 LDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKV 395
G A + +M TP +TY ++ G C + A + +++ G V
Sbjct: 252 DSGVGHAMKLLDEMRDRGCTPDVVTYNVLVN--GICKEGRLDEAIKFLNDMPSSGCQPNV 309
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
T N +L + C G +A+ L + G +P T+ +L + + +L++
Sbjct: 310 ITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEK 369
Query: 456 MEQNGIVPNKRFFLEALETF 475
M Q+G PN + L F
Sbjct: 370 MPQHGCQPNSLSYNPLLHGF 389
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 155/350 (44%), Gaps = 10/350 (2%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
F +LG+ D +Q L + + Q T IY+ LIA+ K A+ LF EMR+
Sbjct: 207 FCKLGRRDSAIQLLNEMKEIGMQ----PTTKIYTMLIALFFKFNDAHGALSLFEEMRHQY 262
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
CRPD Y LI KA + +A +F +M+ E C+P+ V N ++ +A
Sbjct: 263 CRPDVFTYTELIRG----LGKAGRIDEAYHFFCEMQ-REGCRPDTVFMNNMINFLGKAGR 317
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDA-YGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+D LF+E+ P + TYN ++ A + E+ S RMK + P T++
Sbjct: 318 LDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYS 377
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+LID + K +K + + + P + S+I GKA+ A +FQ++
Sbjct: 378 ILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKEN 437
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ S Y +I G + A +FDE++KLG V NA++ G+ EA
Sbjct: 438 CGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEA 497
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G PD ++Y ++ K ++L M+Q+ + P+
Sbjct: 498 LSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPD 547
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 155/333 (46%), Gaps = 7/333 (2%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L +F M+ Q + D Y++LI +GK G+ A F EM+ GCRPD N +I
Sbjct: 252 LSLFEEMRHQ-YCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMI- 309
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN-VDQVNALFKELH 247
+ KA L A+ FQ+M+ + RC P++VTYN +++A ++++ +V + F+ +
Sbjct: 310 ---NFLGKAGRLDDAMKLFQEMETL-RCIPSVVTYNTIIKALFESKSRASEVPSWFERMK 365
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
ES ++P +TY+ ++D + K +++ +L M P + LID+ GK + +D
Sbjct: 366 ESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYD 425
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
++F+ L + + + MI + GKA A +F +M + P Y ++
Sbjct: 426 LACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALM 485
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
+ + A + + G +++ N +L G P A + N V
Sbjct: 486 SGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVR 545
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
PD +Y + A + A M E KL+K M G
Sbjct: 546 PDVVSYNTVLGALSHAGMFEEASKLMKEMNTLG 578
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 160/396 (40%), Gaps = 48/396 (12%)
Query: 104 VKVVRSEHCFLLFEELGKSDKWLQC-LEVFRWMQKQRWYIADTGIY-------------- 148
V ++R +H L E+ K+D + ++ FRW K+R Y DT Y
Sbjct: 50 VLMLRVDH--WLVREVMKTDVGVNVKMQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYG 107
Query: 149 ----------------------SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
S ++ ++G R A+ +F +++ C+P YN++
Sbjct: 108 EMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSM 167
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I +H K + +M C P+ VTY+ L+ A + D L E+
Sbjct: 168 IIMLMHE----GQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEM 223
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
E + P Y ++ + K S+ M+ C+PD+ T+ LI GK
Sbjct: 224 KEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRI 283
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
D+ F + +P N+MI GKA A +FQ+M ++ PS +TY I
Sbjct: 284 DEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTI 343
Query: 367 ITMYGYCDNVSRAREI---FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
I ++ SRA E+ F+ + + G T + +++ +C +A +L E
Sbjct: 344 IK--ALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDE 401
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
G P + Y L A KA +L +L + +++N
Sbjct: 402 KGFPPCPAAYCSLIDALGKAKRYDLACELFQELKEN 437
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 122/253 (48%), Gaps = 17/253 (6%)
Query: 130 EVFRWMQKQRWYIADTGI------YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
EV W ++ + ++GI YS LI K + AM L EM G P P+ Y
Sbjct: 356 EVPSWFERMK----ESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAY 411
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV-TYNILLRACAQARNVDQVNAL 242
+LI A KAK A FQ++K E C + Y ++++ +A +D +
Sbjct: 412 CSLIDA----LGKAKRYDLACELFQELK--ENCGSSSARVYAVMIKHLGKAGRLDDAINM 465
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
F E+++ APD+Y YN +M + GM+ E S + RM+ + C PDI ++N++++ K
Sbjct: 466 FDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAK 525
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ ++ ++ S +P + ++N+++ A + +A + ++M + + IT
Sbjct: 526 TGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLIT 585
Query: 363 YECIITMYGYCDN 375
Y I+ G D+
Sbjct: 586 YSSILEAIGKVDH 598
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 133/330 (40%), Gaps = 5/330 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L LGK+ + + F MQ++ DT + +I +GK G+ AM LF EM
Sbjct: 273 LIRGLGKAGRIDEAYHFFCEMQREGCR-PDTVFMNNMINFLGKAGRLDDAMKLFQEMETL 331
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
C P YN +I A ++ +A + +F++MK P+ TY+IL+ +
Sbjct: 332 RCIPSVVTYNTIIKALFESKSRASEVP---SWFERMKE-SGISPSSFTYSILIDGFCKTN 387
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+++ L +E+ E P Y ++DA GK + +K N +
Sbjct: 388 RMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYA 447
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++I GK D +F + P + +N+++ + + +A ++M
Sbjct: 448 VMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEH 507
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P +Y I+ RA E+ + + V + N +L A G+ EA
Sbjct: 508 GCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEA 567
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
L + + +G D TY + +A K +
Sbjct: 568 SKLMKEMNTLGFEYDLITYSSILEAIGKVD 597
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/236 (19%), Positives = 96/236 (40%), Gaps = 9/236 (3%)
Query: 236 VDQVNALFKELHESILAPDIYT----YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
V+Q ++K + E + P + V+ G M+++ ++ ++K+ +C+P
Sbjct: 103 VEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQ 162
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP---TFNSMIINYGKARLQGKAEYVF 348
+N +I ++K+ Q++ + S E P T++++I + K + A +
Sbjct: 163 AYNSMIIMLMHEGQYEKVHQLYNEM--STEGHCFPDTVTYSALISAFCKLGRRDSAIQLL 220
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
+M + P+ Y +I ++ ++ A +F+E+ V T ++
Sbjct: 221 NEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKA 280
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G EA F G PD+ + KA + KL + ME +P+
Sbjct: 281 GRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPS 336
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 153/316 (48%), Gaps = 11/316 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + K GQT+ A+ + + R D +YN +I K K + A ++
Sbjct: 177 YRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDG----VCKDKLVNDAFDFY 232
Query: 208 QKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+M C P +VTYN L+ C + D + L K + E+I P +YT++ ++DA+
Sbjct: 233 SEMVAKRIC-PTVVTYNTLICGLCIMGQLKDAIGLLHKMILENI-NPTVYTFSILVDAFC 290
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K G +KE ++V M KP+I+T+N L++ Y +K E +F ++ P +
Sbjct: 291 KEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVH 350
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFD 384
+++ MI + K ++ +A +F++M + P +TY +I G C + +S A ++
Sbjct: 351 SYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLID--GLCKSGRISYALKLIG 408
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E+ G+ + T N++L+A C N +A L + + P TY +L K+
Sbjct: 409 EMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSG 468
Query: 445 MKELVQKLLKRMEQNG 460
+ QK+ + + NG
Sbjct: 469 RLKDAQKVFEDVLVNG 484
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 130/321 (40%), Gaps = 15/321 (4%)
Query: 149 SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL-----AKA 203
S LI + G L+ +FS + G PD LI D KAL A
Sbjct: 108 SILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLA 167
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
LG+ + N V+Y L+ + + + + ++ D+ YN ++D
Sbjct: 168 LGF----------QLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIID 217
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K+ ++ + S M + + P ++T+N LI + ++ P
Sbjct: 218 GVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINP 277
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T+ TF+ ++ + K +A+ VF M P+ +TY ++ Y + V++A IF
Sbjct: 278 TVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIF 337
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ ++++G V + + M+ +C + EA LFE H + PD TY L K+
Sbjct: 338 NTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKS 397
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
KL+ M G PN
Sbjct: 398 GRISYALKLIGEMHDRGQPPN 418
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 122/265 (46%), Gaps = 9/265 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + GQ + A+ L +M P ++ L+ A K + +A F
Sbjct: 247 YNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFC----KEGKVKEAKNVF 302
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
M + KPNIVTYN L+ V++ ++F + + +APD+++Y+ ++ + K
Sbjct: 303 VVMMK-KDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCK 361
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
M+ E + M Q PD++T+N LID K ++ + + P + T
Sbjct: 362 IKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIIT 421
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDE 385
+NS++ K KA + K+ PS TY +I G C + + A+++F++
Sbjct: 422 YNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILIN--GLCKSGRLKDAQKVFED 479
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGL 410
+ G ++ V T N M++ +C G
Sbjct: 480 VLVNGYNIDVYTYNTMIKGFCKKGF 504
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 135/303 (44%), Gaps = 13/303 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +Y+ +I + K A +SEM P YN LI L A
Sbjct: 208 DVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICG----LCIMGQLKDA 263
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+G KM +E P + T++IL+ A + V + +F + + + P+I TYN +M+
Sbjct: 264 IGLLHKMI-LENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMN 322
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK- 322
Y + + ES+ + M PD+ +++++I + K + D+ ++F+ MH K+
Sbjct: 323 GYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEE-MHCKQIF 381
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECIITMYGYCDNVSRA 379
P + T+NS+I K+ G+ Y + + M P+ ITY ++ +V +A
Sbjct: 382 PDVVTYNSLIDGLCKS---GRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKA 438
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
E+ +L V T N ++ C +G +A +FE+ G D TY + K
Sbjct: 439 IELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKG 498
Query: 440 YTK 442
+ K
Sbjct: 499 FCK 501
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 6/145 (4%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ +++F M ++ + D Y+ LI + K G+ A+ L EM + G P+ YN+L
Sbjct: 367 EAMKLFEEMHCKQIF-PDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSL 425
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
+ A K + KA+ K+K +P++ TYNIL+ ++ + +F+++
Sbjct: 426 LDA----LCKNHHVDKAIELLTKLKD-HNIQPSVCTYNILINGLCKSGRLKDAQKVFEDV 480
Query: 247 HESILAPDIYTYNGVMDAYGKNGMI 271
+ D+YTYN ++ + K G +
Sbjct: 481 LVNGYNIDVYTYNTMIKGFCKKGFV 505
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 153/322 (47%), Gaps = 5/322 (1%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
D Y +I + K G T A+ +FSEM +G PD VY++L+ + L +
Sbjct: 144 GDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLC----RFGRLKE 199
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
AL +F++M+G ++ TYN L+ ++A +V + + +PD +T+ ++
Sbjct: 200 ALEFFKEMEG-RGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILI 258
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D K G + E + +L M +PDI+T+N L++ + ++F+SL K
Sbjct: 259 DGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIK 318
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
+ ++N +I Y K + +A +F++M PS +TY +I V A+++
Sbjct: 319 LNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKL 378
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
F E+ G+ +K+ST +L+ C NG EA LF++ P+ + +L +
Sbjct: 379 FVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCR 438
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
A E K + +NG+ P+
Sbjct: 439 AGKLEEAWKQFDEISKNGLEPD 460
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 125/297 (42%), Gaps = 6/297 (2%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ LF EM G D Y LI KA+ A+ +KMKG CK ++ TY
Sbjct: 96 AVQLFDEMTEKGLFGDAKTYGILINGLC----KARKTGLAIKLHEKMKG--NCKGDVFTY 149
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
+++ + + + +F E+ + + PD+ Y+ +MD + G +KE M+
Sbjct: 150 GMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEG 209
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
D+ T+N LI + + ++ ++ P TF +I K G+
Sbjct: 210 RGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGE 269
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A+ + + M P +TY ++ + A ++F+ L+ G + V + N ++
Sbjct: 270 AQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILIN 329
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
YC + EA LFE G+ P + TY L A ++ QKL M+ G
Sbjct: 330 GYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCG 386
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/387 (21%), Positives = 160/387 (41%), Gaps = 41/387 (10%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ + L K + L++F M + D +YS L+ + + G+ + A+ F EM
Sbjct: 151 MIIDSLCKDGMTTEALDMFSEMIGAG-ILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEG 209
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G D YN+LI H +A L K + +F + P+ T+ IL+ +
Sbjct: 210 RGISADVYTYNSLI----HGLSRA-GLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKE 264
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
V + + + +H PDI TYN +M+ G +++ + + K ++ ++
Sbjct: 265 GKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSY 324
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI---INYGKAR----------- 339
N+LI+ Y K Q D+ ++F+ + KP+ T+N++I G+ R
Sbjct: 325 NILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQT 384
Query: 340 -------------LQG--------KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
L G +A +FQ + ++ P+ + ++ +
Sbjct: 385 CGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEE 444
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A + FDE+SK G + N ++ C G+ +EA L G PDS T+ ++ +
Sbjct: 445 AWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQ 504
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNK 465
K N +LL+ M P++
Sbjct: 505 NLLKENEIHEAIQLLEEMRNRNFSPDE 531
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 89/219 (40%), Gaps = 29/219 (13%)
Query: 100 LNKYVKVVRSEHCFLLFEE-------------------LGKSDKWLQCLEVFRWMQKQRW 140
+N Y K + + F LFEE L +S + ++F MQ
Sbjct: 328 INGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQ 387
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
++ Y L+ + K G A+ LF ++ + +P+ V++ L+ +A L
Sbjct: 388 FLK-LSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMC----RAGKL 442
Query: 201 AKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
+A F ++ G+E P+ + YNIL+ + + L ++ E PD T+
Sbjct: 443 EEAWKQFDEISKNGLE---PDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITF 499
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
N ++ K I E +L M++ PD ++L+
Sbjct: 500 NVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 68/182 (37%), Gaps = 1/182 (0%)
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
+PD +T L+ Q+F + T+ +I KAR G A
Sbjct: 74 EPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIK 133
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+ +KM F TY II + A ++F E+ G V +++++ C
Sbjct: 134 LHEKMKGNCKGDVF-TYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLC 192
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
G EA F+ G++ D TY L ++A + + V L M G P+
Sbjct: 193 RFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAF 252
Query: 467 FF 468
F
Sbjct: 253 TF 254
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 167/353 (47%), Gaps = 12/353 (3%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG-CRPDPSVYNALI 187
L++ R M+++ + Y +I+ K G+ A+ +F EM G +P+ +YNALI
Sbjct: 534 LDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALI 593
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKEL 246
+ D+ K L AL Y +M +ER + TYN+L+ A + L +E+
Sbjct: 594 GGYC---DQGK-LDTALLYRDRM--VERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM 647
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
LAPD++TYN +++ + K G +K+ + M + ++T+ LI + K+
Sbjct: 648 GGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQV 707
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ +++F + +P L +N++I ++ + +A + +M + P +TY +
Sbjct: 708 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 767
Query: 367 ITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
M G C V AR++ DE+++ G + T N ++ Y M G +A + N
Sbjct: 768 --MRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNK 825
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
G P TY L + K + + ++K M +NGI P+ ++ +E ++
Sbjct: 826 GFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTT 878
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 118/296 (39%), Gaps = 13/296 (4%)
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
TA LH A A A F M + R T+NI+LR A + L +++
Sbjct: 452 TASLHPLLSALPSAPAFALFADMFRL-RLPLCTTTFNIMLRHLCSAGKPARALELLRQMP 510
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS-NQCKPDIITFNLLIDSYGKRQAF 306
P+ TYN V+ + G ++ ++ M+ P+ T+ +I + K
Sbjct: 511 R----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRV 566
Query: 307 DKMEQVFKSLMHSKE-KPTLPTFNSMIINYGKARLQGKAEYVF---QKMTAMKYTPSFIT 362
D+ +VF ++ E KP +N++I Y QGK + +M + T
Sbjct: 567 DEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD---QGKLDTALLYRDRMVERGVAMTVAT 623
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y ++ + A E+ +E+ G V T N ++ +C G +A +FEN
Sbjct: 624 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 683
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
GV TY L A +K + KL + GI P+ + + + S+S
Sbjct: 684 RRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTS 739
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 163/356 (45%), Gaps = 9/356 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L EL ++ K Q V++ M + D S +I + K G+ A+ +F M
Sbjct: 97 LIRELLQTGKIPQASSVYKTMTSHGC-VPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEAR 155
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P+ VY+ALI H KA+ + AL +MK C P+ +TYN+L+ ++
Sbjct: 156 GLAPNEVVYSALI----HGLCKARKMDCALEMLAQMK-KAFCTPDTITYNVLIDGLCKSG 210
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS-NQCKPDIITF 293
+V+ A F E+ E+ PD+YTYN ++ + K G L++ + N C DI T+
Sbjct: 211 DVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTY 270
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK-ARLQGKAEYVFQKMT 352
++D K + ++ + + + + PT+ T+N+++ K RL+ +A + +K+
Sbjct: 271 TAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLE-EAIDLLRKIV 329
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
TP +TY +I G A ++F E++ G + A++ G
Sbjct: 330 DNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIP 389
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+A +++ + G PD T + +KA ++ K ME G+ PN+ +
Sbjct: 390 QASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVY 445
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 165/352 (46%), Gaps = 9/352 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ + L K+ + + +F+ M+ R + +YS LI + K + A+ + ++M+ +
Sbjct: 132 MIDGLSKAGRIGAAVRIFKSME-ARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKA 190
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQA 233
C PD YN LI + D A A +F +M +E CKP++ TYNIL+ +A
Sbjct: 191 FCTPDTITYNVLIDGLCKSGDVEAARA----FFDEM--LEAGCKPDVYTYNILISGFCKA 244
Query: 234 RNVDQV-NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
N D ++L +E + DI+TY ++D KN I+E +++ ++ +N C P I T
Sbjct: 245 GNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIAT 304
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N L++ K ++ + + ++ + P + T+ S+I GK + +A +F++M
Sbjct: 305 YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA 364
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ Y +I + +A ++ ++ G V TL+ M++ G
Sbjct: 365 LRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIG 424
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A +F++ G+ P+ Y L KA + ++L +M++ P+
Sbjct: 425 AAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPD 476
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 132/303 (43%), Gaps = 8/303 (2%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ L ++ +GC P + YNAL L+ K L +A+ +K+ C P++VTY
Sbjct: 5 AVALMEKITANGCTPTIATYNAL----LNGLCKMGRLEEAIDLLRKIVD-NGCTPDVVTY 59
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
L+ + + + LFKE+ LA D Y ++ + G I + SV M S
Sbjct: 60 TSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTS 119
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+ C PD++T + +ID K ++FKS+ P ++++I KAR
Sbjct: 120 HGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 179
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A + +M TP ITY +I +V AR FDE+ + G V T N ++
Sbjct: 180 ALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILIS 239
Query: 404 AYCMNGLPTEA--DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+C G A L E + N G T D TY + K E L++++ NG
Sbjct: 240 GFCKAGNTDAASHSLAQETTIN-GCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGC 298
Query: 462 VPN 464
P
Sbjct: 299 TPT 301
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 131/299 (43%), Gaps = 5/299 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ ++ + K + A+ L ++ +GC P + YNAL L+ K L +A
Sbjct: 266 DIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNAL----LNGLCKMGRLEEA 321
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ +K+ C P++VTY L+ + + + LFKE+ LA D Y ++
Sbjct: 322 IDLLRKIVD-NGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIR 380
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ G I + SV M S+ C PD++T + +ID K ++FKS+ P
Sbjct: 381 ELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAP 440
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
++++I KAR A + +M TP ITY +I +V AR F
Sbjct: 441 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFF 500
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
DE+ + G V T N ++ +C G A +F++ + + + TY L K
Sbjct: 501 DEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCK 559
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 137/319 (42%), Gaps = 6/319 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI +GK+ ++ A LF EM G D Y ALI L T + +A
Sbjct: 55 DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQT----GKIPQA 110
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
++ M C P++VT + ++ ++A + +FK + LAP+ Y+ ++
Sbjct: 111 SSVYKTMTS-HGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIH 169
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K + +L++MK C PD IT+N+LID K + F ++ + KP
Sbjct: 170 GLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKP 229
Query: 324 TLPTFNSMIINYGKARLQGKAEY-VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
+ T+N +I + KA A + + Q+ T T TY I+ + A +
Sbjct: 230 DVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVAL 289
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
++++ G ++T NA+L C G EA L + G TPD TY L K
Sbjct: 290 MEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGK 349
Query: 443 ANMKELVQKLLKRMEQNGI 461
KL K M G+
Sbjct: 350 EKRSFEAYKLFKEMALRGL 368
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 103/246 (41%), Gaps = 39/246 (15%)
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
+++ AL +++ + P I TYN +++ K G ++E +L ++ N C PD++T+
Sbjct: 2 IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61
Query: 296 LIDSYGKRQ-----------------AFD---------------KMEQ---VFKSLMHSK 320
LID GK + A D K+ Q V+K++
Sbjct: 62 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSR 378
P + T ++MI KA G A +F+ M A P+ + Y +I +G C +
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALI--HGLCKARKMDC 179
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A E+ ++ K T N +++ C +G A F+ G PD TY +L
Sbjct: 180 ALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILIS 239
Query: 439 AYTKAN 444
+ KA
Sbjct: 240 GFCKAG 245
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 60/134 (44%), Gaps = 6/134 (4%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L K+ K LE+ M+K + DT Y+ LI + K G A F EM +
Sbjct: 448 LIHGLCKARKMDCALEMLAQMKKA-FCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEA 506
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC+PD YN LI+ KA A G F M RC N+VTY L+ + R
Sbjct: 507 GCKPDVYTYNILISGFC----KAGNTDAACGVFDDMSS-SRCSANVVTYGALISGLCKRR 561
Query: 235 NVDQVNALFKELHE 248
+ + + F+ + E
Sbjct: 562 QLTKASLYFQHMKE 575
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 87/194 (44%)
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
I+E +++ ++ +N C P I T+N L++ K ++ + + ++ + P + T+ S
Sbjct: 2 IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
+I GK + +A +F++M + Y +I + +A ++ ++ G
Sbjct: 62 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
V TL+ M++ G A +F++ G+ P+ Y L KA +
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181
Query: 451 KLLKRMEQNGIVPN 464
++L +M++ P+
Sbjct: 182 EMLAQMKKAFCTPD 195
>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
lyrata]
Length = 1010
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 158/359 (44%), Gaps = 47/359 (13%)
Query: 146 GIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALG 205
G++ L +V+ G A+ FS+M+ P N L LH K L K G
Sbjct: 26 GVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGL----LH---KFAKLGKTDG 78
Query: 206 ---YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
+F+ M G KP + TYNI++ + +V+ LF+E+ L PD TYN ++
Sbjct: 79 VKRFFKDMIGA-GAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMI 137
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D +GK G + + MK C+PD+IT+N LI+ + K K + F+ + + K
Sbjct: 138 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLK 197
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P + ++++++ + K + +A + M + P+ TY +I Y N+S A +
Sbjct: 198 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRL 257
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA-----------------------DLLFE 419
+E+ ++G + V T A+++ C PTE D L +
Sbjct: 258 ANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCK 317
Query: 420 N-------------SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
N S++ G+ +++ Y + K N E L ++M Q G+VP++
Sbjct: 318 NKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDR 376
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 141/329 (42%), Gaps = 47/329 (14%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K R I DT Y+ +I GK G+ + F EM++ C PD YNALI K
Sbjct: 122 KFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFC----K 177
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
L K L +F++MK KPN+V+Y+ L+ A + + Q + ++ L P+ Y
Sbjct: 178 FGKLPKGLEFFREMK-RNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEY 236
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TY ++DAY K G + + + + M + +++T+ LID
Sbjct: 237 TYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDG----------------- 279
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN- 375
+ E PT + ++ +M + + +T+ C++ + G C N
Sbjct: 280 LCGWENPT------------------EGLHLLDEMVELDIKVTVVTF-CVL-IDGLCKNK 319
Query: 376 -VSRAREIFDELS-KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
VS+A + F +S G + AM++ C A LFE G+ PD + Y
Sbjct: 320 LVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAY 379
Query: 434 -KLLYKAYTKANMKELVQKLLKRMEQNGI 461
L+ + + N+ E + L +M + G+
Sbjct: 380 TSLMDGNFKQGNVLEAL-ALRDKMVETGM 407
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 102/246 (41%)
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
C P ++ L V++ F ++ + P + NG++ + K G ++
Sbjct: 21 CVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVK 80
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
M KP + T+N++ID K + +F+ + P T+NSMI +
Sbjct: 81 RFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGF 140
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
GK F++M M P ITY +I + + + E F E+ + G V
Sbjct: 141 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNV 200
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+ + +++A+C G+ +A + + +G+ P+ TY L AY K +L
Sbjct: 201 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANE 260
Query: 456 MEQNGI 461
M Q G+
Sbjct: 261 MLQVGV 266
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 102/228 (44%), Gaps = 2/228 (0%)
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
++ P ++ + GM++E S+MK + P + N L+ + K D
Sbjct: 19 NVCVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDG 78
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+++ FK ++ + KPT+ T+N MI K A +F++M P +TY +I
Sbjct: 79 VKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMID 138
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG-LPTEADLLFENSHNMGVT 427
+G + F+E+ + + V T NA++ +C G LP + E N G+
Sbjct: 139 GFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRN-GLK 197
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
P+ +Y L A+ K M + K M + G+VPN+ + ++ +
Sbjct: 198 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAY 245
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 68/181 (37%), Gaps = 31/181 (17%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI---------TAHLHTRD--- 195
Y+ LI K G A L +EM G + Y ALI T LH D
Sbjct: 238 YTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMV 297
Query: 196 -------------------KAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
K K ++KA+ YF ++ + N Y ++ + V
Sbjct: 298 ELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQV 357
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
+ LF+++ + L PD Y +MD K G + E ++ +M K D++ + L
Sbjct: 358 EAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSL 417
Query: 297 I 297
+
Sbjct: 418 V 418
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 77/184 (41%), Gaps = 10/184 (5%)
Query: 104 VKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRL 163
+KV C L+ + L K+ + ++ F + A+ IY+ +I + K Q
Sbjct: 301 IKVTVVTFCVLI-DGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEA 359
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIV 221
A LF +M G PD + Y +L+ + K + +AL KM GM K +++
Sbjct: 360 ATTLFEQMAQKGLVPDRTAYTSLMDGNF----KQGNVLEALALRDKMVETGM---KLDLL 412
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
Y L+ + + + + +E+ + PD V+ + + G I E + S +
Sbjct: 413 AYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCINEAVELQSYL 472
Query: 282 KSNQ 285
+Q
Sbjct: 473 MKHQ 476
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 144/316 (45%), Gaps = 5/316 (1%)
Query: 149 SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQ 208
S +IA G+ G A+ F +++ G P YNAL L KA +AL +
Sbjct: 255 STVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNAL----LQVFGKAGNYTEALRVLK 310
Query: 209 KMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
+M+ C+P+ VTYN L A+A ++ + L P+ +TYN VM AY
Sbjct: 311 EMED-SGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANV 369
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
G + E ++ RMK N P++ T+NL+ GK+ F M ++ + + S P T+
Sbjct: 370 GRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTW 429
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
N+M+ GK ++ V M + S TY +I+ YG C + + A +++DE+
Sbjct: 430 NTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMIS 489
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
G ++T NA+L G + A + G P+ +Y LL + Y K
Sbjct: 490 SGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAG 549
Query: 449 VQKLLKRMEQNGIVPN 464
++ + K + I P+
Sbjct: 550 IESIEKEVYVGTIFPS 565
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 139/320 (43%), Gaps = 4/320 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ ++ + + G+ A+ LF+E+R G P YN ++ + ++ +
Sbjct: 179 DVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRM---GRSWPRI 235
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ ++M+ +P+ T + ++ AC + +DQ A F++L P + TYN ++
Sbjct: 236 VALLEEMRA-AGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQ 294
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+GK G E VL M+ + C+PD +T+N L +Y + F++ + ++ P
Sbjct: 295 VFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLP 354
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T+N+++ Y +A +F +M Y P+ TY I M G + E+
Sbjct: 355 NTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEML 414
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+E+S+ G T N ML G+ + + GV TY L AY +
Sbjct: 415 EEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRC 474
Query: 444 NMKELVQKLLKRMEQNGIVP 463
+ K+ M +G P
Sbjct: 475 GSRTYAFKMYDEMISSGFTP 494
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 164/351 (46%), Gaps = 15/351 (4%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
+ +G+ D + L +F M+K Y+ + Y+ + ++GKK + + + EM SG
Sbjct: 366 YANVGRVD---EALALFDRMKKNG-YVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSG 421
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV--TYNILLRACAQA 233
C P+ +N ++ A R + + L GM+ C + TYN L+ A +
Sbjct: 422 CTPNRVTWNTML-AVCGKRGMEDYVTRVL------NGMKSCGVELSRDTYNTLISAYGRC 474
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ ++ E+ S P + TYN +++ + G +S++S+M N KP+ ++
Sbjct: 475 GSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSY 534
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII-NYGKARLQGKAEYVFQKMT 352
+LL+ Y K +E + K + P+ +++I N+ RL+G E FQ++
Sbjct: 535 SLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEG-VEKAFQEVK 593
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
A Y P + + ++ MY S+A E+FD + + G + T N++++ Y +
Sbjct: 594 AQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESW 653
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
EA+ + + + V PD +Y + + K + + Q++L M +G+ P
Sbjct: 654 EAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAP 704
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 154/349 (44%), Gaps = 23/349 (6%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K R ++ Y+ L+ V GK G A+ + EM +SGC+PD YN L
Sbjct: 278 KARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNEL---------- 327
Query: 197 AKALAKALGYFQKM---------KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
A A+A G+F++ KG+ PN TYN ++ A A VD+ ALF +
Sbjct: 328 AGTYARA-GFFEEAAKCLDTMTSKGL---LPNTFTYNTVMTAYANVGRVDEALALFDRMK 383
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
++ P++ TYN + GK M +L M + C P+ +T+N ++ GKR D
Sbjct: 384 KNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMED 443
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
+ +V + + + T+N++I YG+ + A ++ +M + +TP TY ++
Sbjct: 444 YVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALL 503
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
+ + S A+ I ++ K G + + +L+ Y G + + + + +
Sbjct: 504 NVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIF 563
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
P + L A K E V+K + ++ G P+ F L ++
Sbjct: 564 PSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYA 612
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 152/353 (43%), Gaps = 44/353 (12%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMR-N 173
L + L S W L + RW + AD ++ +G++GQ + L EM
Sbjct: 116 LLKALELSGHWEWALALLRWASDEG--AADAAALEMVVRALGREGQHDVVCDLLDEMPLP 173
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ- 232
G R D Y T LH +A +AL F +++ + P IVTYN++L +
Sbjct: 174 PGSRLDVRAY----TTVLHALSRAGRYERALQLFAELR-RQGVVPTIVTYNVVLDVYGRM 228
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
R+ ++ AL +E+ + + PD +T + V+ A G++G++ + + +K+ P ++T
Sbjct: 229 GRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVT 288
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N L+ +GK + + +V K + S +P T+N + Y +A +A MT
Sbjct: 289 YNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMT 348
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ P+ TY ++T Y NV R
Sbjct: 349 SKGLLPNTFTYNTVMTAYA---NVGRV--------------------------------D 373
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
EA LF+ G P+ +TY L++ K + + ++L+ M ++G PN+
Sbjct: 374 EALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNR 426
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 132/287 (45%), Gaps = 31/287 (10%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA---------- 197
Y+ L+ V+ ++G A + S+M +G +P+ Y+ L+ + + A
Sbjct: 499 YNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVY 558
Query: 198 -----------KALAKALGYFQKMKGMERC---------KPNIVTYNILLRACAQARNVD 237
+ L A ++++G+E+ KP++V +N +L A+
Sbjct: 559 VGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYS 618
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ +F + +S L+PD+ TYN +MD Y K+ E E +L ++KS+Q KPD++++N +I
Sbjct: 619 KATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVI 678
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+ + K+ + +++ ++ P + T+++++ Y + +A V M
Sbjct: 679 NGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLK 738
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
P +TY ++ Y ARE E+S ++ L MLEA
Sbjct: 739 PMELTYRRVVDSYCKAKRYDEAREFLSEISDTDQNFD-QKLQHMLEA 784
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 147/311 (47%), Gaps = 9/311 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI+ G+ G A ++ EM +SG P + YNAL+ ++ +R + A+++
Sbjct: 464 YNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALL--NVLSRQGDWSTAQSIVSK 521
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
G KPN +Y++LL+ A+ N + ++ KE++ + P ++ A K
Sbjct: 522 MLKNGF---KPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFK 578
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
++ +E +K+ KPD++ FN ++ Y K + K ++F S+ S P L T
Sbjct: 579 CRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLIT 638
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDE 385
+NS++ Y K+ +AE + +++ + + P ++Y +I G+C + A+ I E
Sbjct: 639 YNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVIN--GFCKQGLIKEAQRILSE 696
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ G V T + ++ Y + EA + + + P TY+ + +Y KA
Sbjct: 697 MIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKR 756
Query: 446 KELVQKLLKRM 456
+ ++ L +
Sbjct: 757 YDEAREFLSEI 767
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 145/298 (48%), Gaps = 8/298 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D + LI K G + M +G P+ +YN LI+ KA LA+A
Sbjct: 28 DVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLC----KAGMLAEA 83
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
Y ++M + C PN+V+YNI++ +ARN+++ A +E+ E P + Y+ ++
Sbjct: 84 ESYLKRMP--QHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQ 141
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
++ K G + + V + M + C+PDI+ FN+L+ + + + ++F+S+ KP
Sbjct: 142 SFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKP 201
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T+N+MI K + +A ++ ++M +P+F+TY +I + +A E+F
Sbjct: 202 DVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVF 261
Query: 384 DELSK--LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+++++ ++ ++ C P EA +F+ G++P TY L +
Sbjct: 262 EKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEG 319
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 150/350 (42%), Gaps = 42/350 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS ++ K G AM +F+EM GC PD +N L++ +A+ + +A F
Sbjct: 136 YSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW----RARKIHEARELF 191
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ M CKP++VTYN ++ + + +D+ L + + + ++P TY ++D K
Sbjct: 192 RSMNS-RGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCK 250
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFN--LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+++ V +M C ++ +LI+ K + + +++F+ + PT+
Sbjct: 251 FARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTV 310
Query: 326 PTFNSMIINY-GKARLQG-------------------------------KAEYVFQKMTA 353
T+N+++ A+LQ + E F+ ++A
Sbjct: 311 VTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSA 370
Query: 354 MK---YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M+ + PS +E +++ + A E++ E+S++ V + N +L+ G
Sbjct: 371 MRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGS 430
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
EA + + G+ PD TY L + +KL++ + ++G
Sbjct: 431 VDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 2/247 (0%)
Query: 196 KAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
+A +A+A ++MK P++ ++ +L+R ++ + + + + E+ L P+
Sbjct: 6 EADLVAQAEAIVEEMK-YAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNA 64
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
YN ++ K GM+ E ES L RM C P+++++N++ID Y K + +K +
Sbjct: 65 ILYNNLISCLCKAGMLAEAESYLKRM-PQHCAPNVVSYNIIIDGYCKARNIEKALAFLRE 123
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
+ PT ++S++ ++ K KA VF +M A P + + +++
Sbjct: 124 MEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARK 183
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+ ARE+F ++ G V T N M+ C EA L E V+P TY
Sbjct: 184 IHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTT 243
Query: 436 LYKAYTK 442
L K
Sbjct: 244 LIDHLCK 250
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 1/238 (0%)
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+R +A V Q A+ +E+ + +PD+ ++ ++ + K+G + S L RM
Sbjct: 1 IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
P+ I +N LI K + E K M P + ++N +I Y KAR KA
Sbjct: 61 FPNAILYNNLISCLCKAGMLAEAESYLKR-MPQHCAPNVVSYNIIIDGYCKARNIEKALA 119
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
++M + + P+ Y I+ + NVS+A ++F E+ G + + N +L
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 179
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA LF + ++ G PD TY + K + LL+RM+Q + P
Sbjct: 180 RARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPT 237
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 94/212 (44%), Gaps = 8/212 (3%)
Query: 270 MIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFN 329
++ + E+++ MK PD+ + LLI + K +F + ++ + P +N
Sbjct: 9 LVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYN 68
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
++I KA + +AE ++M P+ ++Y II Y N+ +A E+ +L
Sbjct: 69 NLISCLCKAGMLAEAESYLKRM-PQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEEL 127
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
G +++++++C G ++A +F G PD + +L +A
Sbjct: 128 GHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEA 187
Query: 450 QKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
++L + M G P+ + T+++ +AG
Sbjct: 188 RELFRSMNSRGCKPD-------VVTYNTMIAG 212
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 155/331 (46%), Gaps = 15/331 (4%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
R+ + + + I + K G+ A ++ ++ G + + NALI H +
Sbjct: 416 RFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALI----HGLCQGN 471
Query: 199 ALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+ +A + M G+E + +TYNI+++ C +A +D+ L ++ + PD++
Sbjct: 472 NMKEATKVLKAMVNSGVEL---DRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLF 528
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
T+N + Y G ++E+ +L +MKS KPDI+T+ +ID Y K + K + L
Sbjct: 529 TFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTEL 588
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT---PSFITYECIITMYGYC 373
M + +P +N++I YG+ G + MKY P+ +TY ++ +
Sbjct: 589 MKNGLRPNAVIYNALIGGYGR---NGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHA 645
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
V + +F + ++ V +++ +C G EA + F+ H+ G+ P+ TY
Sbjct: 646 GLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTY 705
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L AY+K+ KE KL M GIVP+
Sbjct: 706 TTLMFAYSKSGNKEEASKLFDEMVSLGIVPD 736
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 160/371 (43%), Gaps = 18/371 (4%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM 171
C +L E LG + +VF M+ + D Y+ +I + + G+ A + +E+
Sbjct: 178 CSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAEL 237
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGM---ERCKPNIVTYNILLR 228
R SG +P YN L+ A + +A ++KG R +P+IVT+ IL+
Sbjct: 238 RRSGIQPTVVTYNVLMDALCKSGRVEEAF--------RLKGRMVEGRVRPSIVTFGILIS 289
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
A+ + +V A+ +E+ + P+ YN ++ + + G E + M S K
Sbjct: 290 GLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQ 349
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
++T+NL+ + K + E++ ++ + FNS++ + R G+ + V
Sbjct: 350 TVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWH--LRGTGRLDLVL 407
Query: 349 ---QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
++M A P+ I A EI+ ++ G + V+T NA++
Sbjct: 408 RLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGL 467
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN-MKELVQKLLKRMEQNGIVPN 464
C EA + + N GV D TY ++ + KA+ M E +Q L M + G P+
Sbjct: 468 CQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQ-LRDDMIKRGFKPD 526
Query: 465 KRFFLEALETF 475
F L T+
Sbjct: 527 LFTFNIFLHTY 537
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 140/332 (42%), Gaps = 12/332 (3%)
Query: 116 FEELGKSDKWLQCLEVFRWMQK-QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+EL KS K + E+ W Q + + + LI + + + A + M NS
Sbjct: 429 IQELCKSGKHEEAAEI--WFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNS 486
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQ 232
G D YN +I KA + +A+ M +G KP++ T+NI L
Sbjct: 487 GVELDRITYNIMIQGCC----KASKMDEAIQLRDDMIKRGF---KPDLFTFNIFLHTYCN 539
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
V+++ L ++ L PDI TY ++D Y K + + L+ + N +P+ +
Sbjct: 540 LGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVI 599
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N LI YG+ + ++ ++ +PT T+NS++ A L + + VF +
Sbjct: 600 YNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCI 659
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
I Y II + + A F E+ G T ++ AY +G
Sbjct: 660 VKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKE 719
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
EA LF+ ++G+ PDS +Y L + + +
Sbjct: 720 EASKLFDEMVSLGIVPDSVSYNTLISGFCEVD 751
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 125/263 (47%), Gaps = 2/263 (0%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHES-ILAPDIYTYNGVMDAYGKNGMIKEMES 276
P+I T +IL+ A +D +F E+ + +APD++TY ++ A + G I +
Sbjct: 173 PSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFA 232
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+L+ ++ + +P ++T+N+L+D+ K ++ ++ ++ + +P++ TF +I
Sbjct: 233 MLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLA 292
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
+ + G+ V Q+M TP+ + Y +I + + S A ++FDE+ G V
Sbjct: 293 RGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVV 352
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK-ELVQKLLKR 455
T N + +A C G A+ + + G+ S + + + + + +LV +L++
Sbjct: 353 TYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIRE 412
Query: 456 MEQNGIVPNKRFFLEALETFSSS 478
M + PN ++ S
Sbjct: 413 MLARFLKPNDALMTACIQELCKS 435
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 110/232 (47%), Gaps = 11/232 (4%)
Query: 159 GQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERC 216
G+ + L +M++ G +PD Y +I + KAK + KA Y ++ G+
Sbjct: 541 GKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYC----KAKDMHKANEYLTELMKNGL--- 593
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+PN V YN L+ + N+ + + + + P TYN +M G+++E+++
Sbjct: 594 RPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKA 653
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-KPTLPTFNSMIINY 335
V ++ + +I + ++I + K D+ FK MHS+ P T+ +++ Y
Sbjct: 654 VFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKE-MHSRGIPPNKMTYTTLMFAY 712
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
K+ + +A +F +M ++ P ++Y +I+ + D++ + E E+S
Sbjct: 713 SKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMS 764
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 82/186 (44%), Gaps = 36/186 (19%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI--TAHLHTRDKAKA----- 199
IY+ LI G+ G A+ + M+ +G +P P YN+L+ H ++ KA
Sbjct: 599 IYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQC 658
Query: 200 ------------------------LAKALGYFQKM--KGMERCKPNIVTYNILLRACAQA 233
+ +A+ YF++M +G+ PN +TY L+ A +++
Sbjct: 659 IVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGI---PPNKMTYTTLMFAYSKS 715
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
N ++ + LF E+ + PD +YN ++ + + + +M + M S K D ++
Sbjct: 716 GNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSY 775
Query: 294 NLLIDS 299
N +D
Sbjct: 776 NAFVDG 781
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 163/347 (46%), Gaps = 10/347 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
LF +L L E R+M + D Y++LI +GK G+ A + EM+
Sbjct: 274 LFFKLDNVHGALSLFEEMRYM----YCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQRE 329
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC+PD V N +I + KA L L F++M G+ C PN+VTYN +++A +++
Sbjct: 330 GCKPDTVVMNNMI----NFLGKAGRLDDGLKLFEEM-GVSHCIPNVVTYNTIIKALFESK 384
Query: 235 N-VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ V +V + F+ + S ++P +TY+ ++D + K I++ +L M P +
Sbjct: 385 SRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAY 444
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
LID+ GK + +D ++F+ L + + + MI + GKA A +F +M+
Sbjct: 445 CSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSK 504
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
+ TP+ Y +++ + A ++ + G +++ N +L G P
Sbjct: 505 LGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHR 564
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
A + N N + PD+ +Y + A + A M E +L+K M G
Sbjct: 565 AMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALG 611
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 157/364 (43%), Gaps = 10/364 (2%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
F +LG+ D ++ L K+ IY+ +I++ K A+ LF EMR
Sbjct: 240 FCKLGRQDSAIRLLNEM----KENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMY 295
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
CRPD Y LI KA + +A ++ +M+ E CKP+ V N ++ +A
Sbjct: 296 CRPDVFTYTELIRG----LGKAGRIDEAYHFYHEMQ-REGCKPDTVVMNNMINFLGKAGR 350
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDA-YGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+D LF+E+ S P++ TYN ++ A + + E+ S RMK + P T++
Sbjct: 351 LDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYS 410
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+LID + K +K + + + P + S+I GKA+ A +FQ++
Sbjct: 411 ILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKEN 470
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ S Y +I G + A +FDE+SKLG V NA++ + EA
Sbjct: 471 CGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEA 530
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
G PD ++Y ++ K ++L M+ + I P+ + L
Sbjct: 531 LTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSA 590
Query: 475 FSSS 478
S +
Sbjct: 591 LSHA 594
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 160/396 (40%), Gaps = 48/396 (12%)
Query: 104 VKVVRSEHCFLLFEELGKSDKWLQC-LEVFRWMQKQRWYIADTGIY-------------- 148
V ++R +H L E+ K+D + ++ FRW K+R Y DT Y
Sbjct: 83 VLMLRVDH--WLVREVMKTDVGVNVKMQFFRWAAKKRNYQHDTSTYMALIHCLELVEQYG 140
Query: 149 ----------------------SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
S++I ++G A+ +F +++ C+P YN++
Sbjct: 141 EMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSM 200
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I +H K + +M C+P+ VTY+ L+ A + D L E+
Sbjct: 201 IIMLIHEGQYEKVHE----LYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEM 256
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
E+ + P Y ++ + K + S+ M+ C+PD+ T+ LI GK
Sbjct: 257 KENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRI 316
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
D+ + + KP N+MI GKA +F++M P+ +TY I
Sbjct: 317 DEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTI 376
Query: 367 ITMYGYCDNVSRAREIFDELSKL-GKDMKVS--TLNAMLEAYCMNGLPTEADLLFENSHN 423
I ++ SR E+F ++ G + S T + +++ +C +A +L E
Sbjct: 377 IK--ALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDE 434
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
G P + Y L A KA +L +L + +++N
Sbjct: 435 KGFPPCPAAYCSLIDALGKAKRYDLACELFQELKEN 470
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 119/252 (47%), Gaps = 17/252 (6%)
Query: 130 EVFRWMQKQRWYIADTGI------YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
EVF W ++ + +GI YS LI K + AM L EM G P P+ Y
Sbjct: 389 EVFSWFERMK----GSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAY 444
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV-TYNILLRACAQARNVDQVNAL 242
+LI A KAK A FQ++K E C + Y ++++ +A +D L
Sbjct: 445 CSLIDA----LGKAKRYDLACELFQELK--ENCGSSSARVYAVMIKHLGKAGRLDDAINL 498
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
F E+ + P++Y YN +M + M+ E + + +M+ + C PDI ++N++++ K
Sbjct: 499 FDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAK 558
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ ++ ++ +S KP ++N+++ A + +A + ++M A+ + IT
Sbjct: 559 TGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLIT 618
Query: 363 YECIITMYGYCD 374
Y I+ G D
Sbjct: 619 YSSILEAIGKVD 630
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 136/330 (41%), Gaps = 5/330 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L LGK+ + + + MQ++ DT + + +I +GK G+ + LF EM S
Sbjct: 306 LIRGLGKAGRIDEAYHFYHEMQREGCK-PDTVVMNNMINFLGKAGRLDDGLKLFEEMGVS 364
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
C P+ YN +I A ++ + +++ +F++MKG P+ TY+IL+ +
Sbjct: 365 HCIPNVVTYNTIIKALFESKSR---VSEVFSWFERMKG-SGISPSPFTYSILIDGFCKTN 420
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+++ L +E+ E P Y ++DA GK + +K N +
Sbjct: 421 RIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYA 480
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++I GK D +F + P + +N+++ +A + +A +KM
Sbjct: 481 VMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEH 540
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P +Y I+ RA E+ + + N +L A G+ EA
Sbjct: 541 GCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEA 600
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
L + + +G D TY + +A K +
Sbjct: 601 AELMKEMNALGFEYDLITYSSILEAIGKVD 630
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 98/234 (41%), Gaps = 5/234 (2%)
Query: 236 VDQVNALFKELHESILAPDIYT----YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
V+Q ++K + E + +P + V+ G MI + ++ ++K+ +C+P
Sbjct: 136 VEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQ 195
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-KPTLPTFNSMIINYGKARLQGKAEYVFQK 350
+N +I ++K+ +++ + + +P T++++I + K Q A + +
Sbjct: 196 AYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNE 255
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M P+ Y II+++ DNV A +F+E+ + V T ++ G
Sbjct: 256 MKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGR 315
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA + G PD+ + KA + KL + M + +PN
Sbjct: 316 IDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPN 369
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 75/188 (39%), Gaps = 35/188 (18%)
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN-YGKARLQGKAEYV 347
D T+ LI + + +M ++ + ++ S P S +I G A++ GKA +
Sbjct: 122 DTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMIGKAITI 181
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F ++ A K P+ Y +I M + + E+++E+S E +C
Sbjct: 182 FYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSN--------------EGHC- 226
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
PD+ TY L A+ K ++ +LL M++NG+ P +
Sbjct: 227 -------------------QPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKI 267
Query: 468 FLEALETF 475
+ + F
Sbjct: 268 YTMIISLF 275
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 144/316 (45%), Gaps = 5/316 (1%)
Query: 149 SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQ 208
S +IA G+ G A+ F +++ G P YNAL L KA +AL +
Sbjct: 255 STVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNAL----LQVFGKAGNYTEALRVLK 310
Query: 209 KMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
+M+ C+P+ VTYN L A+A ++ + L P+ +TYN VM AY
Sbjct: 311 EMED-SGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANV 369
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
G + E ++ RMK N P++ T+NL+ GK+ F M ++ + + S P T+
Sbjct: 370 GRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTW 429
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
N+M+ GK ++ V M + S TY +I+ YG C + + A +++DE+
Sbjct: 430 NTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMIS 489
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
G ++T NA+L G + A + G P+ +Y LL + Y K
Sbjct: 490 SGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAG 549
Query: 449 VQKLLKRMEQNGIVPN 464
++ + K + I P+
Sbjct: 550 IESIEKEVYVGTIFPS 565
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 139/320 (43%), Gaps = 4/320 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ ++ + + G+ A+ LF+E+R G P YN ++ + ++ +
Sbjct: 179 DVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRM---GRSWPRI 235
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ ++M+ +P+ T + ++ AC + +DQ A F++L P + TYN ++
Sbjct: 236 VALLEEMRA-AGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQ 294
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+GK G E VL M+ + C+PD +T+N L +Y + F++ + ++ P
Sbjct: 295 VFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLP 354
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T+N+++ Y +A +F +M Y P+ TY I M G + E+
Sbjct: 355 NTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEML 414
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+E+S+ G T N ML G+ + + GV TY L AY +
Sbjct: 415 EEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRC 474
Query: 444 NMKELVQKLLKRMEQNGIVP 463
+ K+ M +G P
Sbjct: 475 GSRTYAFKMYDEMISSGFTP 494
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 164/351 (46%), Gaps = 15/351 (4%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
+ +G+ D + L +F M+K Y+ + Y+ + ++GKK + + + EM SG
Sbjct: 366 YANVGRVD---EALALFDRMKKNG-YVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSG 421
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV--TYNILLRACAQA 233
C P+ +N ++ A R + + L GM+ C + TYN L+ A +
Sbjct: 422 CTPNRVTWNTML-AVCGKRGMEDYVTRVL------NGMKSCGVELSRDTYNTLISAYGRC 474
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ ++ E+ S P + TYN +++ + G +S++S+M N KP+ ++
Sbjct: 475 GSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSY 534
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII-NYGKARLQGKAEYVFQKMT 352
+LL+ Y K +E + K + P+ +++I N+ RL+G E FQ++
Sbjct: 535 SLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEG-VEKAFQEVK 593
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
A Y P + + ++ MY S+A E+FD + + G + T N++++ Y +
Sbjct: 594 AQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESW 653
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
EA+ + + + V PD +Y + + K + + Q++L M +G+ P
Sbjct: 654 EAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAP 704
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 154/349 (44%), Gaps = 23/349 (6%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K R ++ Y+ L+ V GK G A+ + EM +SGC+PD YN L
Sbjct: 278 KARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNEL---------- 327
Query: 197 AKALAKALGYFQKM---------KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
A A+A G+F++ KG+ PN TYN ++ A A VD+ ALF +
Sbjct: 328 AGTYARA-GFFEEAAKCLDTMTSKGL---LPNTFTYNTVMTAYANVGRVDEALALFDRMK 383
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
++ P++ TYN + GK M +L M + C P+ +T+N ++ GKR D
Sbjct: 384 KNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMED 443
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
+ +V + + + T+N++I YG+ + A ++ +M + +TP TY ++
Sbjct: 444 YVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALL 503
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
+ + S A+ I ++ K G + + +L+ Y G + + + + +
Sbjct: 504 NVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIF 563
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
P + L A K E V+K + ++ G P+ F L ++
Sbjct: 564 PSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYA 612
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 152/353 (43%), Gaps = 44/353 (12%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMR-N 173
L + L S W L + RW + AD ++ +G++GQ + L EM
Sbjct: 116 LLKALELSGHWEWALALLRWASDEG--AADAAALEMVVRALGREGQHDVVCDLLDEMPLP 173
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ- 232
G R D Y T LH +A +AL F +++ + P IVTYN++L +
Sbjct: 174 PGSRLDVRAY----TTVLHALSRAGRYERALQLFAELR-RQGVVPTIVTYNVVLDVYGRM 228
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
R+ ++ AL +E+ + + PD +T + V+ A G++G++ + + +K+ P ++T
Sbjct: 229 GRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVT 288
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N L+ +GK + + +V K + S +P T+N + Y +A +A MT
Sbjct: 289 YNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMT 348
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ P+ TY ++T Y NV R
Sbjct: 349 SKGLLPNTFTYNTVMTAYA---NVGRV--------------------------------D 373
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
EA LF+ G P+ +TY L++ K + + ++L+ M ++G PN+
Sbjct: 374 EALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNR 426
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 132/287 (45%), Gaps = 31/287 (10%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA---------- 197
Y+ L+ V+ ++G A + S+M +G +P+ Y+ L+ + + A
Sbjct: 499 YNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVY 558
Query: 198 -----------KALAKALGYFQKMKGMERC---------KPNIVTYNILLRACAQARNVD 237
+ L A ++++G+E+ KP++V +N +L A+
Sbjct: 559 VGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYS 618
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ +F + +S L+PD+ TYN +MD Y K+ E E +L ++KS+Q KPD++++N +I
Sbjct: 619 KATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVI 678
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+ + K+ + +++ ++ P + T+++++ Y + +A V M
Sbjct: 679 NGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLK 738
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
P +TY ++ Y ARE E+S ++ L MLEA
Sbjct: 739 PMELTYRRVVDSYCKAKRYDEAREFLSEISDTDQNFD-QKLQHMLEA 784
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 147/311 (47%), Gaps = 9/311 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI+ G+ G A ++ EM +SG P + YNAL+ ++ +R + A+++
Sbjct: 464 YNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALL--NVLSRQGDWSTAQSIVSK 521
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
G KPN +Y++LL+ A+ N + ++ KE++ + P ++ A K
Sbjct: 522 MLKNGF---KPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFK 578
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
++ +E +K+ KPD++ FN ++ Y K + K ++F S+ S P L T
Sbjct: 579 CRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLIT 638
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDE 385
+NS++ Y K+ +AE + +++ + + P ++Y +I G+C + A+ I E
Sbjct: 639 YNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVIN--GFCKQGLIKEAQRILSE 696
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ G V T + ++ Y + EA + + + P TY+ + +Y KA
Sbjct: 697 MIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKR 756
Query: 446 KELVQKLLKRM 456
+ ++ L +
Sbjct: 757 YDEAREFLSEI 767
>gi|227463004|gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463006|gb|ACP39955.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 547
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 168/343 (48%), Gaps = 7/343 (2%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
S+ + L F W +KQ+ + +T Y+ LI +GK Q +L L +EM++ +
Sbjct: 134 SNAGVIALSFFTWAEKQKGFKYNTESYNALIEALGKIKQFKLIRSLVNEMKSRKLLNKDT 193
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
ALI+ H R A+ + +A+ F++M+ K +N LL ++R+V++ N
Sbjct: 194 F--ALISRR-HAR--ARKVEEAIEAFERMEEFG-FKLETSDFNRLLDTLCKSRHVEKANK 247
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
+F ++ + PDI +Y +++ +GK + ++ V MK + +PD++T+ +LI +Y
Sbjct: 248 VFDKMKKRRFVPDIKSYTILLEGWGKEHNLLRLDEVYLEMKYDGFEPDVVTYGILISAYC 307
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
K + +D ++F + KPT + ++I G + +A F++ + +TP
Sbjct: 308 KAKKYDAAIELFHEMEAKNCKPTPHVYCTLINGLGSEKRLSEALEFFERFKSCGFTPEAP 367
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN- 420
TY ++ Y + + A ++ DE+ K T + +L EA F+
Sbjct: 368 TYNSLVGAYCWSMRIDDAFQVIDEMRKHSAGPNSRTYDIILHHLIKARRTNEAYFRFQKM 427
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
S+ G P STY+++ + + + +L +++ +M+ G++P
Sbjct: 428 SNEPGCEPTVSTYEIIVRMFCNEDRVDLAKQVWDQMKAKGVLP 470
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 122/279 (43%), Gaps = 11/279 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + L KS + +VF M+K+R ++ D Y+ L+ GK+ ++ EM+
Sbjct: 232 LLDTLCKSRHVEKANKVFDKMKKRR-FVPDIKSYTILLEGWGKEHNLLRLDEVYLEMKYD 290
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G PD Y LI+A+ KAK A+ F +M+ + CKP Y L+ +
Sbjct: 291 GFEPDVVTYGILISAYC----KAKKYDAAIELFHEMEA-KNCKPTPHVYCTLINGLGSEK 345
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ + F+ P+ TYN ++ AY + I + V+ M+ + P+ T++
Sbjct: 346 RLSEALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRKHSAGPNSRTYD 405
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKE---KPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
+++ K + + E F+ S E +PT+ T+ ++ + A+ V+ +M
Sbjct: 406 IILHHLIKARRTN--EAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDRVDLAKQVWDQM 463
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
A P Y +IT + + + A + F E+ G
Sbjct: 464 KAKGVLPGMHMYSDLITSLCHKNKLGEACKYFQEMLDAG 502
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 105/249 (42%), Gaps = 13/249 (5%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L E GK L+ EV+ M K + D Y LI+ K + A+ LF EM
Sbjct: 266 ILLEGWGKEHNLLRLDEVYLEM-KYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEA 324
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERC--KPNIVTYNILLRACA 231
C+P P VY LI K L++AL +F++ K C P TYN L+ A
Sbjct: 325 KNCKPTPHVYCTLING----LGSEKRLSEALEFFERFKS---CGFTPEAPTYNSLVGAYC 377
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ--CKPD 289
+ +D + E+ + P+ TY+ ++ K E +M SN+ C+P
Sbjct: 378 WSMRIDDAFQVIDEMRKHSAGPNSRTYDIILHHLIKARRTNEAYFRFQKM-SNEPGCEPT 436
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
+ T+ +++ + D +QV+ + P + ++ +I + G+A FQ
Sbjct: 437 VSTYEIIVRMFCNEDRVDLAKQVWDQMKAKGVLPGMHMYSDLITSLCHKNKLGEACKYFQ 496
Query: 350 KMTAMKYTP 358
+M P
Sbjct: 497 EMLDAGIRP 505
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 83/212 (39%), Gaps = 36/212 (16%)
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+YN +++A GK K + S+++ MKS + + TF L+ + + + ++ + F+ +
Sbjct: 159 SYNALIEALGKIKQFKLIRSLVNEMKSRKL-LNKDTFALISRRHARARKVEEAIEAFERM 217
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
K FN ++ K+R KA VF KM ++ P +Y ++ +G N+
Sbjct: 218 EEFGFKLETSDFNRLLDTLCKSRHVEKANKVFDKMKKRRFVPDIKSYTILLEGWGKEHNL 277
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
R E++ E MK G PD TY +L
Sbjct: 278 LRLDEVYLE-------MKYD----------------------------GFEPDVVTYGIL 302
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
AY KA + +L ME P +
Sbjct: 303 ISAYCKAKKYDAAIELFHEMEAKNCKPTPHVY 334
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 151/312 (48%), Gaps = 9/312 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + K G TR A+ L ++ +P+ +Y+ +I A K + +++A G F
Sbjct: 167 YGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALC----KYQLVSEAYGLF 222
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M ++ ++VTY+ L+ + + L E+ + P++YTYN ++DA K
Sbjct: 223 SEMT-VKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCK 281
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G +KE +SVL+ M KPD+IT++ L+D Y K + VF ++ P + T
Sbjct: 282 EGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHT 341
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ +I + K ++ +A +F++M P +TY +I + ++ DE+
Sbjct: 342 YTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMH 401
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA---- 443
G+ V T +++++ C NG A LF + G+ P++ T+ +L K
Sbjct: 402 DRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLK 461
Query: 444 NMKELVQKLLKR 455
+ +E+ Q LL +
Sbjct: 462 DAQEVFQDLLTK 473
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 156/339 (46%), Gaps = 11/339 (3%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+R Y DT + LI + KGQ + A+ ++ G + + Y LI D
Sbjct: 122 KRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTR 181
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
A+ QK+ G KPN+V Y+ ++ A + + V + LF E+ ++ D+ T
Sbjct: 182 AAIK----LLQKIDG-RLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y+ ++ + G +KE +L+ M P++ T+N+L+D+ K + + V ++
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN-- 375
+ KP + T+++++ Y KA++VF M+ M TP TY +I G+C N
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILIN--GFCKNKM 354
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG-LPTEADLLFENSHNMGVTPDSSTYK 434
V A +F E+ + + T +++++ C +G +P DL+ E H+ G + TY
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDE-MHDRGQPANVITYS 413
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
L K + L +M+ GI PN F L+
Sbjct: 414 SLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLD 452
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 139/306 (45%), Gaps = 13/306 (4%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
AD YS LI +G+ + A+ L +EM P+ YN L+ A L K K
Sbjct: 232 ADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDA-LCKEGKVKEAKS 290
Query: 203 ALGYFQKMKGMERC-KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
L ++ C KP+++TY+ L+ V + +F + + PD++TY +
Sbjct: 291 VLAVM-----LKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTIL 345
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
++ + KN M+ E ++ M P I+T++ LID K + + MH +
Sbjct: 346 INGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDE-MHDRG 404
Query: 322 KPT-LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSR 378
+P + T++S+I K +A +F KM P+ T+ I + G C +
Sbjct: 405 QPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFT--ILLDGLCKGGRLKD 462
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A+E+F +L G + V T N M++ +C GL EA + + G PD+ T++++
Sbjct: 463 AQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIII 522
Query: 439 AYTKAN 444
A K +
Sbjct: 523 ALFKKD 528
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 15/206 (7%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ L +F+ M Q+ + YS LI + K G+ L EM + G + Y++L
Sbjct: 357 EALNLFKEMH-QKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSL 415
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I K L +A+ F KMK + +PN T+ ILL + + +F++L
Sbjct: 416 IDGLC----KNGHLDRAIALFNKMKD-QGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDL 470
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI------DSY 300
++YTYN ++D + K G+++E ++LS+M+ N C PD +TF ++I D
Sbjct: 471 LTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKDEN 530
Query: 301 GKRQAFDKMEQVFKSLMHSK-EKPTL 325
G FDK +V++ + H K E P++
Sbjct: 531 GGNVGFDK--KVWEIVEHKKGETPSI 554
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 125/331 (37%), Gaps = 47/331 (14%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
LI GQ + +++ G PD N LI L + + K KAL + K+
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKG-LCLKGQVK---KALHFHDKL 155
Query: 211 KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
+ + N V+Y L+ + + L +++ + P++ Y+ ++DA K +
Sbjct: 156 LA-QGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQL 214
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
+ E + S M D++T++ LI + + + ++ P + T+N
Sbjct: 215 VSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNI 274
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
++ K +A+ V M P ITY ++ Y V +A+ +F+ +S
Sbjct: 275 LVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSL-- 332
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
MGVTPD TY +L + K M +
Sbjct: 333 ---------------------------------MGVTPDVHTYTILINGFCKNKMVDEAL 359
Query: 451 KLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
L K M Q +VP + T+SS + G
Sbjct: 360 NLFKEMHQKNMVP-------GIVTYSSLIDG 383
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 98/218 (44%), Gaps = 7/218 (3%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+R Y DT ++ LI + KGQ A+ ++ G + + Y LI D
Sbjct: 989 KRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTR 1048
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
A+ +K+ G KP++V YN ++ A + + V + LF E++ ++ D+ T
Sbjct: 1049 AAIK----LLRKIDG-RLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVT 1103
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK--RQAFDKMEQVFKS 315
YN ++ + G +KE +L++M P++ T+N+L+D+ K + D+ +
Sbjct: 1104 YNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSK 1163
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+ + K TF +I + K E + +M A
Sbjct: 1164 MEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIA 1201
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 121/314 (38%), Gaps = 68/314 (21%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRD---KAKALAKAL--GYFQKMKGMERCKP 218
A+ L + G +PD N LI H LAK L GY P
Sbjct: 945 AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGY----------HP 994
Query: 219 NIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDI----YTYNGVMDAYGKNGMIKE 273
+ +T+ L+ C + QVN H+ +LA +Y +++ K G +
Sbjct: 995 DTITFTTLINGLCLKG----QVNKAL-HFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRA 1049
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
+L ++ KPD++ +N +ID+ K Q
Sbjct: 1050 AIKLLRKIDGRLTKPDVVMYNTIIDALCKHQ----------------------------- 1080
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL---G 390
L KA +F +M + +TY +I YG+C V + +E L+K+
Sbjct: 1081 ------LVSKAYGLFFEMNVKGISADVVTYNTLI--YGFCI-VGKLKEAIGLLNKMVLKT 1131
Query: 391 KDMKVSTLNAMLEAYCMNG--LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
+ V T N +++A C G L E+ + + G ++ T++++ A + + +
Sbjct: 1132 INPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDK 1191
Query: 449 VQKLLKRMEQNGIV 462
V+KLL M G++
Sbjct: 1192 VEKLLHEMIARGLL 1205
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 83/197 (42%), Gaps = 8/197 (4%)
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
S+ R++ +PD+ T N+LI+ + + ++ P TF ++I
Sbjct: 947 SLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGL 1006
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM-- 393
KA + K+ A + + ++Y +I G C + R L K+ +
Sbjct: 1007 CLKGQVNKALHFHDKLLAQGFQLNQVSYGTLIN--GVC-KIGDTRAAIKLLRKIDGRLTK 1063
Query: 394 -KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK-LLYKAYTKANMKELVQK 451
V N +++A C + L ++A LF + G++ D TY L+Y +KE +
Sbjct: 1064 PDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAI-G 1122
Query: 452 LLKRMEQNGIVPNKRFF 468
LL +M I PN R +
Sbjct: 1123 LLNKMVLKTINPNVRTY 1139
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 29/161 (18%), Positives = 61/161 (37%)
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
Q D F ++ + P + FN ++ ++ K + A + ++ P IT
Sbjct: 38 QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+I + + ++ + ++ K G TLN +++ C+ G +A +
Sbjct: 98 NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G + +Y L K KLL++++ PN
Sbjct: 158 QGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPN 198
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 167/353 (47%), Gaps = 12/353 (3%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG-CRPDPSVYNALI 187
L++ R M+++ + Y +I+ K G+ A+ +F EM G +P+ +YNALI
Sbjct: 92 LDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALI 151
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKEL 246
+ D+ K L AL Y +M +ER + TYN+L+ A + L +E+
Sbjct: 152 GGYC---DQGK-LDTALLYRDRM--VERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM 205
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
LAPD++TYN +++ + K G +K+ + M + ++T+ LI + K+
Sbjct: 206 GGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQV 265
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ +++F + +P L +N++I ++ + +A + +M + P +TY +
Sbjct: 266 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 325
Query: 367 ITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
M G C V AR++ DE++K G + T N ++ Y M G +A + N
Sbjct: 326 --MRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNK 383
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
G P TY L + K + + ++K M +NGI P+ ++ +E ++
Sbjct: 384 GFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTT 436
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 118/296 (39%), Gaps = 13/296 (4%)
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
TA LH A A A F M + R T+NI+LR A + L +++
Sbjct: 10 TASLHPLLSALPSAPAFALFADMFRL-RLPLCTTTFNIMLRHLCSAGKPARALELLRQMP 68
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS-NQCKPDIITFNLLIDSYGKRQAF 306
P+ TYN V+ + G ++ ++ M+ P+ T+ +I + K
Sbjct: 69 R----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRV 124
Query: 307 DKMEQVFKSLMHSKE-KPTLPTFNSMIINYGKARLQGKAEYVF---QKMTAMKYTPSFIT 362
D+ +VF ++ E KP +N++I Y QGK + +M + T
Sbjct: 125 DEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD---QGKLDTALLYRDRMVERGVAMTVAT 181
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y ++ + A E+ +E+ G V T N ++ +C G +A +FEN
Sbjct: 182 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 241
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
GV TY L A +K + KL + GI P+ + + + S+S
Sbjct: 242 RRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTS 297
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 145/316 (45%), Gaps = 5/316 (1%)
Query: 149 SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQ 208
S +IA + G A+ F +++ G P YNAL L KA +AL +
Sbjct: 248 STVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNAL----LQVFGKAGNYTEALRVLK 303
Query: 209 KMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
+M+ + C+P+ VTYN L A+A ++ + L P+ +TYN VM AYG
Sbjct: 304 EME-QDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNI 362
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
G + E ++ +MK + C P++ T+N ++ GK+ F M ++ + S P T+
Sbjct: 363 GKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTW 422
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
N+M+ GK ++ V + M + S TY +I YG C + + A ++++E++
Sbjct: 423 NTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTS 482
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
G ++T NA+L G + A + G P+ +Y LL + Y K
Sbjct: 483 AGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAG 542
Query: 449 VQKLLKRMEQNGIVPN 464
+ + K + + P+
Sbjct: 543 IDAIEKEVYGGTVFPS 558
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 163/350 (46%), Gaps = 13/350 (3%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
+ +GK D + L +F M+K + + Y+ ++ ++GKK + + + + EM SG
Sbjct: 359 YGNIGKVD---EALALFDQMKKSGC-VPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSG 414
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV--TYNILLRACAQA 233
C P+ +N ++ A R + + L +GM+ C + TYN L+ A +
Sbjct: 415 CTPNRVTWNTML-AVCGKRGMEDYVTRVL------EGMKSCGVELSRDTYNTLIAAYGRC 467
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ ++ E+ + AP + TYN +++ + G +S++S+M++ KP+ ++
Sbjct: 468 GSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSY 527
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+LL+ Y K ++ + K + P+ +++I K R G E FQ++ A
Sbjct: 528 SLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKA 587
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
Y P + + +++MY S+ EIFD + + G + T N++++ Y E
Sbjct: 588 RGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWE 647
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
A+ + + V PD +Y + + K + + Q++L M +G+ P
Sbjct: 648 AEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAP 697
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 140/322 (43%), Gaps = 8/322 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ ++ + + G+ A+ LF+E+R G P YN ++ + ++ +
Sbjct: 172 DVRAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRM---GRSWPRI 228
Query: 204 LGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+ +M+ G+E P+ T + ++ AC + VD+ A F++L P + TYN +
Sbjct: 229 VALLDEMRAAGVE---PDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNAL 285
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ +GK G E VL M+ + C+PD +T+N L +Y + +++ + ++
Sbjct: 286 LQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGL 345
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P T+N+++ YG +A +F +M P+ TY I+ M G + E
Sbjct: 346 LPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLE 405
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ E+S+ G T N ML G+ + E + GV TY L AY
Sbjct: 406 MLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYG 465
Query: 442 KANMKELVQKLLKRMEQNGIVP 463
+ + K+ M G P
Sbjct: 466 RCGSRTNAFKMYNEMTSAGFAP 487
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 148/340 (43%), Gaps = 5/340 (1%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K R + Y+ L+ V GK G A+ + EM GC+PD YN L +
Sbjct: 271 KARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFY 330
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+A AK L KG+ PN TYN ++ A VD+ ALF ++ +S P++
Sbjct: 331 EEA-AKCLDTMTS-KGL---LPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVN 385
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TYN ++ GK M +L M + C P+ +T+N ++ GKR D + +V + +
Sbjct: 386 TYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGM 445
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+ + T+N++I YG+ + A ++ +MT+ + P TY ++ + +
Sbjct: 446 KSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDW 505
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
S A+ I ++ G + + +L+ Y G D + + + V P + L
Sbjct: 506 STAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTL 565
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
A K ++K + ++ G P+ F L ++
Sbjct: 566 VIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYA 605
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 132/289 (45%), Gaps = 33/289 (11%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA---------- 197
Y+ L+ V+ ++G A + S+MR G +P+ Y+ L+ + + A
Sbjct: 492 YNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVY 551
Query: 198 -----------KALAKALGYFQKMKGMERC---------KPNIVTYNILLRACAQARNVD 237
+ L A +++ G+E+ P++V +N +L A+
Sbjct: 552 GGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYS 611
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+V +F + +S L+PD+ TYN +MD Y K E E +L+++KS+Q KPD++++N +I
Sbjct: 612 KVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVI 671
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+ + K+ + +++ ++ P + T+++++ Y + +A V M
Sbjct: 672 NGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAREVINYMIQHNLK 731
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGK--DMKV-STLNAMLE 403
P +TY ++ Y AR E+S+ D KV TL A +E
Sbjct: 732 PMELTYRRVVDSYCKAKRFEEARSFLSEVSETDPNFDKKVLHTLAAYIE 780
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 139/352 (39%), Gaps = 42/352 (11%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + L S W L + RW + AD ++ +G++GQ L EM
Sbjct: 109 LLKALELSGHWEWALALLRWAGAEG--AADASALEMVVRALGREGQHDAVCALLDEM--- 163
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
P P + L R Y +L A ++A
Sbjct: 164 ---PLPP------GSRLDVR---------------------------AYTTVLHALSRAG 187
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM-IKEMESVLSRMKSNQCKPDIITF 293
++ LF EL +AP + TYN V+D YG+ G + ++L M++ +PD T
Sbjct: 188 RYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDDFTA 247
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+ +I + + D+ F+ L P + T+N+++ +GKA +A V ++M
Sbjct: 248 STVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQ 307
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P +TY + Y A + D ++ G T N ++ AY G E
Sbjct: 308 DGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDE 367
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
A LF+ G P+ +TY + K + ++ ++L M ++G PN+
Sbjct: 368 ALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNR 419
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 156/356 (43%), Gaps = 19/356 (5%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQ---RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSE 170
+L +L + + VF MQ + R ++ ++ +I+ M + G A L
Sbjct: 121 VLMRDLVRLGELASAQNVFDEMQSRGVRRTVVS----FNTMISGMCRAGDLDGAETLHRR 176
Query: 171 MRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLR 228
M +G PD Y ALI + + A G F+KM +GM KPN V + IL+
Sbjct: 177 MSEAGVTPDVYTYGALIQGLC----RVGRIEDARGVFEKMCGRGM---KPNAVVFTILID 229
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
A + + + + L +E+ E + PD TYN +++ + +K ++ M+S +P
Sbjct: 230 AHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRP 289
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
D +T+ LID Y K + D ++ ++++ T+ ++I KA AE V
Sbjct: 290 DTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVL 349
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
+M P TY +I + +V + E+ G+ V T N ++ +C
Sbjct: 350 GEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKL 409
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G AD+L N+GV+PD TY +L + K +++L G VP+
Sbjct: 410 GQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEEL---KSAKGTVPD 462
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 144/307 (46%), Gaps = 17/307 (5%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK--ALAKALGYFQKM--KGMERCKPN 219
A + ++ ++G P+ ++N L+ RD + LA A F +M +G+ R
Sbjct: 100 ACAFYLQLLDAGLPPEAKLFNVLM------RDLVRLGELASAQNVFDEMQSRGVRR---T 150
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+V++N ++ +A ++D L + + E+ + PD+YTY ++ + G I++ V
Sbjct: 151 VVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFE 210
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
+M KP+ + F +LID++ K+ + M ++ + + +P T+N+++ +AR
Sbjct: 211 KMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRAR 270
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVST 397
A + +M + P +TY +I GYC + + A EI + G + T
Sbjct: 271 DLKSASGIVVEMRSAGLRPDTVTYTTLID--GYCKEEELDMAMEIKQNMVAEGVGLDEVT 328
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
A++ G +A+ + G+ PD++TY ++ A+ + + +LLK M+
Sbjct: 329 YTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQ 388
Query: 458 QNGIVPN 464
G P
Sbjct: 389 NKGRKPG 395
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 9/239 (3%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
LE+ R M ++R D Y+ ++ + + + A + EMR++G RPD Y LI
Sbjct: 241 LELHREM-RERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLID 299
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
+ K + L A+ Q M E + VTY L+ ++A + E+ E
Sbjct: 300 GYC----KEEELDMAMEIKQNMVA-EGVGLDEVTYTALISGLSKAGRSADAERVLGEMME 354
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
+ L PD TY V+DA+ + G +K +L M++ KP ++T+N++++ + K
Sbjct: 355 AGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKN 414
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
+ + ++++ P T+N ++ + K GK + + +A P Y I+
Sbjct: 415 ADMLLNAMINIGVSPDDITYNILLDGHCK---HGKVTDIEELKSAKGTVPDLGVYTSIV 470
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 159/358 (44%), Gaps = 44/358 (12%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y ++ + K+G T LA L ++M P +YN +I K K + A
Sbjct: 834 DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC----KYKHMDDA 889
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
L F++M KG+ +PN+VTY+ L+ + L ++ E + PD++T++ +
Sbjct: 890 LNLFKEMETKGI---RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 946
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+DA+ K G + E E + M P I+T++ LI+ + D+ +Q+F+ ++
Sbjct: 947 IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 1006
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P + T+N++I + K + + VF++M+ + +TY +I + A+E
Sbjct: 1007 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 1066
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE-----------NSHNM------ 424
IF E+ G + T N +L+ C NG +A ++FE ++N+
Sbjct: 1067 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 1126
Query: 425 ------------------GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
GV PD Y + + + KE L K M+++G +PN
Sbjct: 1127 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPN 1184
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 155/344 (45%), Gaps = 15/344 (4%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR---DKA 197
Y D Y+ +I + K + A F E+ G RP+ Y AL+ ++ D A
Sbjct: 289 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 348
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+ L+ + ++ PN++TY+ LL A + V + LF+E+ + PDI T
Sbjct: 349 RLLSDMIK--------KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 400
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y+ +++ + I E + M S C D++++N LI+ + K + + ++F+ +
Sbjct: 401 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 460
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN-- 375
T+N++I + +A KA+ F +M +P TY I + G CDN
Sbjct: 461 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN--ILLGGLCDNGE 518
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+ +A IF+++ K D+ + T ++ C G EA LF + G+ PD TY
Sbjct: 519 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 578
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSL 479
+ + V+ L +M+Q G++ N + T S+ L
Sbjct: 579 MMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAEL 622
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 148/326 (45%), Gaps = 9/326 (2%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
Y D L+ ++ + A+ L +M G +PD YNA+I + K K +
Sbjct: 254 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC----KTKRV 309
Query: 201 AKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
A +F+++ KG+ +PN+VTY L+ + L ++ + + P++ TY
Sbjct: 310 NDAFDFFKEIERKGI---RPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY 366
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
+ ++DA+ KNG + E + + M PDI+T++ LI+ D+ Q+F ++
Sbjct: 367 SALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS 426
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
+ ++N++I + KA+ +F++M+ + +TY +I + +V +
Sbjct: 427 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 486
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A+E F ++ G + T N +L C NG +A ++FE+ + D TY + +
Sbjct: 487 AQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIR 546
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPN 464
K E L + G+ P+
Sbjct: 547 GMCKTGKVEEAWSLFCSLSLKGLKPD 572
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 139/314 (44%), Gaps = 7/314 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS LI+ + G+ A L S+M PD ++ALI A + K L +A +
Sbjct: 908 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV----KEGKLVEAEKLY 963
Query: 208 QKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+M ++R P+IVTY+ L+ +D+ +F+ + PD+ TYN ++ +
Sbjct: 964 DEM--VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 1021
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K ++E V M + +T+N+LI + D +++FK ++ P +
Sbjct: 1022 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 1081
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T+N+++ K KA VF+ + K P+ TY +I V ++F L
Sbjct: 1082 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 1141
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
S G V N M+ +C G EAD LF+ G P+S Y L +A + +
Sbjct: 1142 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDR 1201
Query: 447 ELVQKLLKRMEQNG 460
E +L+K M G
Sbjct: 1202 EASAELIKEMRSCG 1215
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 153/352 (43%), Gaps = 40/352 (11%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+SKL++ + K + + + L +M+N G + Y+ LI ALA LG
Sbjct: 698 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALA-VLGKM 756
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K+ G E PNIVT + LL ++ + + AL ++ + P+ T+N ++
Sbjct: 757 MKL-GYE---PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 812
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ E +++ RM + C+PD++T+ ++++ KR D + + K +P +
Sbjct: 813 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 872
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM---YGYCDNVSR------ 378
+N++I K + A +F++M P+ +TY +I+ YG + SR
Sbjct: 873 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 932
Query: 379 --------------------------AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
A +++DE+ K D + T ++++ +CM+
Sbjct: 933 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 992
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA +FE + PD TY L K + K E ++ + M Q G+V N
Sbjct: 993 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 1044
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 144/303 (47%), Gaps = 9/303 (2%)
Query: 164 AMWLFSEMRNSGCRPDPSV--YNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV 221
A+ LFS+M S RP PS+ +N L++A + K + +LG ++ G+ + ++
Sbjct: 172 AIDLFSDMVKS--RPFPSIVDFNRLLSAIVKL--KKYDVVISLGKKMEVLGI---RNDLY 224
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
T+NI++ V ++ ++ + PD T +++ + + + + S++ +M
Sbjct: 225 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 284
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
KPDI+ +N +IDS K + + FK + +P + T+ +++ +
Sbjct: 285 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 344
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
A + M K TP+ ITY ++ + V A+E+F+E+ ++ D + T +++
Sbjct: 345 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 404
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ C++ EA+ +F+ + G D +Y L + KA E KL + M Q G+
Sbjct: 405 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 464
Query: 462 VPN 464
V N
Sbjct: 465 VSN 467
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 10/239 (4%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + K+ K L+ E+F M + D YS LI + + A +F M +
Sbjct: 369 LLDAFVKNGKVLEAKELFEEMVRMS-IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 427
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQ 232
GC D YN LI KAK + + F++M +G+ N VTYN L++ Q
Sbjct: 428 GCLADVVSYNTLINGFC----KAKRVEDGMKLFREMSQRGL---VSNTVTYNTLIQGFFQ 480
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
A +VD+ F ++ ++PDI+TYN ++ NG +++ + M+ + DI+T
Sbjct: 481 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 540
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
+ +I K ++ +F SL KP + T+ +M+ L + E ++ KM
Sbjct: 541 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 599
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 16/234 (6%)
Query: 109 SEHCF-------LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQT 161
S+HCF L + K + + +EVFR M QR + +T Y+ LI + + G
Sbjct: 1003 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS-QRGLVGNTVTYNILIQGLFQAGDC 1061
Query: 162 RLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV 221
+A +F EM + G P+ YN L+ KA+ Y Q+ K ME P I
Sbjct: 1062 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV-VFEYLQRSK-ME---PTIY 1116
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
TYNI++ +A V+ LF L + PD+ YN ++ + + G +E +++ M
Sbjct: 1117 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 1176
Query: 282 KSNQCKPDIITFNLLIDSY---GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
K + P+ +N LI + G R+A ++ + +S + + T+ +M+
Sbjct: 1177 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 1230
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 114/263 (43%), Gaps = 16/263 (6%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L S +W + M K++ + YS L+ K G+ A LF EM
Sbjct: 334 LVNGLCNSSRWSDAARLLSDMIKKK-ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 392
Query: 175 GCRPDPSVYNALITA-HLHTR-DKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRAC 230
PD Y++LI LH R D+A + F M KG C ++V+YN L+
Sbjct: 393 SIDPDIVTYSSLINGLCLHDRIDEANQM------FDLMVSKG---CLADVVSYNTLINGF 443
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
+A+ V+ LF+E+ + L + TYN ++ + + G + + + S+M PDI
Sbjct: 444 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 503
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
T+N+L+ +K +F+ + + + T+ ++I K +A +F
Sbjct: 504 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 563
Query: 351 MTAMKYTPSFITYECIITMYGYC 373
++ P +TY + M G C
Sbjct: 564 LSLKGLKPDIVTYTTM--MSGLC 584
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 118/278 (42%), Gaps = 5/278 (1%)
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L A+ F +M R P+I+ ++ LL A A+ D V +L +++ + + YTY+
Sbjct: 676 LDDAVALFGEMVK-SRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 734
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
+++ + + + +VL +M +P+I+T + L++ Y + + + + +
Sbjct: 735 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 794
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVS 377
+P TFN++I +A + +M A P +TY ++ G C +
Sbjct: 795 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN--GLCKRGDTD 852
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
A + +++ + + V N +++ C +A LF+ G+ P+ TY L
Sbjct: 853 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 912
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+LL M + I P+ F ++ F
Sbjct: 913 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 950
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/403 (21%), Positives = 155/403 (38%), Gaps = 58/403 (14%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L L + + + L +F MQK+ + D Y+ +I M K G+ A LF +
Sbjct: 508 ILLGGLCDNGELEKALVIFEDMQKREMDL-DIVTYTTVIRGMCKTGKVEEAWSLFCSLSL 566
Query: 174 SGCRPDPSVYNALITA-----------HLHTRDKAKALAK-------------------- 202
G +PD Y +++ L+T+ K + L K
Sbjct: 567 KGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKM 626
Query: 203 -ALGYFQKMKGMERCKPNIVTYNI-LLRACAQ----------ARN------VDQVNALFK 244
+ GY + ++ K + + LLRA + +RN +D ALF
Sbjct: 627 LSCGYAPSL--LKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFG 684
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
E+ +S P I ++ ++ A K + S+ +M++ + T+++LI+ + +R
Sbjct: 685 EMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRS 744
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
V +M +P + T +S++ Y ++ +A + +M Y P+ +T+
Sbjct: 745 QLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFN 804
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE--NSH 422
+I + S A + D + G + T ++ C G + DL F N
Sbjct: 805 TLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG---DTDLAFNLLNKM 861
Query: 423 NMG-VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G + P Y + K + L K ME GI PN
Sbjct: 862 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 904
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 87/202 (43%), Gaps = 4/202 (1%)
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
+ S M ++ P I+ FN L+ + K + +D + + K + + L TFN +I +
Sbjct: 174 DLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCF 233
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDM 393
A + KM + Y P +T ++ G+C + VS A + D++ ++G
Sbjct: 234 CCCFQVSLALSILGKMLKLGYEPDRVTIGSLVN--GFCRRNRVSDAVSLVDKMVEIGYKP 291
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
+ NA++++ C +A F+ G+ P+ TY L ++ +LL
Sbjct: 292 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 351
Query: 454 KRMEQNGIVPNKRFFLEALETF 475
M + I PN + L+ F
Sbjct: 352 SDMIKKKITPNVITYSALLDAF 373
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 78/186 (41%), Gaps = 7/186 (3%)
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+F ++ S+ P++ FN ++ K + + +KM + T+ +I +
Sbjct: 174 DLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCF 233
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
C VS A I ++ KLG + T+ +++ +C ++A L + +G PD
Sbjct: 234 CCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDI 293
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTD 490
Y + + K K +E+ GI PN + T+++ + G + S +D
Sbjct: 294 VAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN-------VVTYTALVNGLCNSSRWSD 346
Query: 491 LTRSLS 496
R LS
Sbjct: 347 AARLLS 352
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 158/353 (44%), Gaps = 11/353 (3%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+ ++ D Y+ ++ + K + A+ LF+EM GC P+ +N +I L + K
Sbjct: 108 EDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILG-LCQQSK- 165
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+ +A F +M+ + P+ +Y IL+ A+A +++ LF+ + +S + P T
Sbjct: 166 --IDQACQVFHEMEAKD-IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVT 222
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN V+ + E + M+S C+P TFN+LID++ KR D+ ++ K +
Sbjct: 223 YNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMT 282
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DN 375
P + T++++I A ++ + M + P+ +T +I +G C
Sbjct: 283 DDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLI--HGLCKAGR 340
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+ ARE+ D + G+ V T N ++ +C G A L + G+ P+ TY
Sbjct: 341 IKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTA 400
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAK 488
L KAN + +M+ +G PN + + F S AG G K
Sbjct: 401 LVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCS--AGQVDGGLK 451
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 159/382 (41%), Gaps = 33/382 (8%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K+ K +F+ + T Y+ LI + A LF++M
Sbjct: 15 ILIDGLAKAGKLNDARNLFQKLL-HSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNR 73
Query: 174 SGCRPDPSVYNALITAHL-------------------HTRD------------KAKALAK 202
GC P P YN +I A H D K+ + +
Sbjct: 74 RGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEE 133
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
AL F +M+ + C PN ++N ++ Q +DQ +F E+ + PD ++Y ++
Sbjct: 134 ALLLFNEMERLG-CTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILI 192
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D K G + E + RM + P +T+N++I D+ ++FKS+ +
Sbjct: 193 DGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCR 252
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P+ TFN +I + K +A + ++MT + P +TY +I+ V AR +
Sbjct: 253 PSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHL 312
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+++ K V T N ++ C G EA + + + G +PD TY L + +
Sbjct: 313 LEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCR 372
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
A E ++LL M G+ PN
Sbjct: 373 AGQTERARELLSDMVARGLAPN 394
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 161/365 (44%), Gaps = 13/365 (3%)
Query: 90 FSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYS 149
F++ E L T N+ RS + +L L + K Q +VF M+ + D+ Y
Sbjct: 138 FNEMERLGCTPNR-----RSHNTIIL--GLCQQSKIDQACQVFHEMEAKD-IPPDSWSYG 189
Query: 150 KLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQK 209
LI + K G+ A LF M +SG P YN +I H A L +AL F+
Sbjct: 190 ILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVI----HGMCLAYTLDEALELFKS 245
Query: 210 MKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG 269
M+ + C+P+ T+NIL+ A + +D+ L K + + PD+ TY+ ++
Sbjct: 246 MRS-KGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIA 304
Query: 270 MIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFN 329
+ + +L M QCKP ++T N LI K + +V +++ S + P + T+N
Sbjct: 305 RVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYN 364
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
+++ + +A +A + M A P+ +TY +++ + + A +F ++
Sbjct: 365 TLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSS 424
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
G + T A++ +C G LF G++PD Y L K+
Sbjct: 425 GCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARA 484
Query: 450 QKLLK 454
++L+
Sbjct: 485 LEILR 489
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 144/324 (44%), Gaps = 13/324 (4%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+R D+ Y LI + K G+ A LF ++ +SG P Y +LI H A
Sbjct: 3 ERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLI----HGLCMA 58
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+ A F M C P+ VTYN+++ A + +++ L K++ E PD+ T
Sbjct: 59 NSFDDARELFADMN-RRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVT 117
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN VMD K+ ++E + + M+ C P+ + N +I ++ D+ QVF +
Sbjct: 118 YNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEME 177
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DN 375
P ++ +I KA +A +FQ+M TPS +TY +I +G C
Sbjct: 178 AKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVI--HGMCLAYT 235
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+ A E+F + G T N +++A+C G EA L + + G PD TY
Sbjct: 236 LDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYST 295
Query: 436 LYKAYTKA----NMKELVQKLLKR 455
L + + L++ ++KR
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKR 319
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 138/318 (43%), Gaps = 13/318 (4%)
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
PD Y LI KA L A FQK+ P+ V Y L+ A + D
Sbjct: 8 PDSWSYGILIDGLA----KAGKLNDARNLFQKLL-HSGVTPSTVAYTSLIHGLCMANSFD 62
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
LF +++ P TYN ++DA K GM++E ++ +M + PD++T+N ++
Sbjct: 63 DARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVM 122
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
D K ++ +F + P + N++I+ + +A VF +M A
Sbjct: 123 DGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIP 182
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P +Y +I ++ A ++F + G T N ++ C+ EA L
Sbjct: 183 PDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALEL 242
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
F++ + G P T+ +L A+ K + +LLKRM +G VP+ + T+S+
Sbjct: 243 FKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPD-------VVTYST 295
Query: 478 SLAGSQSGSAKTDLTRSL 495
++G S A+ D R L
Sbjct: 296 LISGLCS-IARVDDARHL 312
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 123/308 (39%), Gaps = 43/308 (13%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI------YSKLIAVMGKKGQTRLAMWL 167
+L + L K+ K + ++F+ M D+GI Y+ +I M A+ L
Sbjct: 190 ILIDGLAKAGKLNEAYKLFQRM-------LDSGITPSAVTYNVVIHGMCLAYTLDEALEL 242
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAK----------ALGYFQKMKGM-- 213
F MR+ GCRP +N LI AH D+A L K + Y + G+
Sbjct: 243 FKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCS 302
Query: 214 ----------------ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+CKP +VT N L+ +A + + + + S +PD+ T
Sbjct: 303 IARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVT 362
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN ++ + + G + +LS M + P+++T+ L+ K + VF +
Sbjct: 363 YNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMK 422
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
S P L T+ ++I+ + A +F +M +P + Y + +
Sbjct: 423 SSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSA 482
Query: 378 RAREIFDE 385
RA EI E
Sbjct: 483 RALEILRE 490
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 142/322 (44%), Gaps = 8/322 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ ++ + + G+ A+ LF+E+R G P YN ++ + ++ +
Sbjct: 173 DVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRM---GRSWPRI 229
Query: 204 LGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+ +M+ G+E P+ T + ++ AC + VD+ A F++L AP + TYN +
Sbjct: 230 VALLDEMRAAGVE---PDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNAL 286
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ +GK G E VL M+ N C+PD +T+N L +Y + F++ + ++
Sbjct: 287 LQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGL 346
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P T+N+++ YG +A +F +M + P+ TY ++ M G + E
Sbjct: 347 LPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLE 406
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ E+S+ G T N ML G+ + E + GV TY L AY
Sbjct: 407 MLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYG 466
Query: 442 KANMKELVQKLLKRMEQNGIVP 463
+ + K+ M G P
Sbjct: 467 RCGSRTNAFKMYNEMTSAGFTP 488
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 172/400 (43%), Gaps = 52/400 (13%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
+ +GK D + L +F M+K ++ + Y+ ++ ++GKK + + + + EM SG
Sbjct: 360 YGNVGKVD---EALALFDQMKKT-GFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSG 415
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV--TYNILLRACAQA 233
C P+ +N ++ A R + + L +GM C + TYN L+ A +
Sbjct: 416 CTPNRVTWNTML-AVCGKRGMEDYVTRVL------EGMRSCGVELSRDTYNTLIAAYGRC 468
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ ++ E+ + P I TYN +++ + G +S++S+M++ KP+ ++
Sbjct: 469 GSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSY 528
Query: 294 NLLIDSYGKR------------------------------------QAFDKMEQVFKSLM 317
+LL+ Y K + D ME F+ +
Sbjct: 529 SLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVK 588
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
P L FNSM+ Y K + KA VF + +P ITY ++ MY C
Sbjct: 589 ARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESW 648
Query: 378 RAREIFDELSKLGKDMK--VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
A +I ++L K + MK V + N ++ +C GL EA + G+ P + TY
Sbjct: 649 EAEKILNQL-KCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHT 707
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
L Y+ M ++++ M Q+G+ P + + +E++
Sbjct: 708 LVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESY 747
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 135/296 (45%), Gaps = 5/296 (1%)
Query: 149 SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQ 208
S +IA + G A+ F +++ G P YNAL L KA +AL
Sbjct: 249 STVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNAL----LQVFGKAGNYTEALRVLG 304
Query: 209 KMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
+M+ C+P+ VTYN L A+A ++ + L P+ +TYN VM AYG
Sbjct: 305 EME-QNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNV 363
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
G + E ++ +MK P++ T+NL++ GK+ F M ++ + S P T+
Sbjct: 364 GKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTW 423
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
N+M+ GK ++ V + M + S TY +I YG C + + A ++++E++
Sbjct: 424 NTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTS 483
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
G ++T NA+L G + A + G P+ +Y LL + Y K
Sbjct: 484 AGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGG 539
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 129/282 (45%), Gaps = 23/282 (8%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K R + Y+ L+ V GK G A+ + EM +GC+PD YN L
Sbjct: 272 KARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNEL---------- 321
Query: 197 AKALAKALGYFQKMKGMERCK---------PNIVTYNILLRACAQARNVDQVNALFKELH 247
A A+A G+F++ RC PN TYN ++ A VD+ ALF ++
Sbjct: 322 AGTYARA-GFFEEAA---RCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMK 377
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
++ P++ TYN V+ GK M +L M + C P+ +T+N ++ GKR D
Sbjct: 378 KTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMED 437
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
+ +V + + + + T+N++I YG+ + A ++ +MT+ +TP TY ++
Sbjct: 438 YVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALL 497
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
+ + S A+ I ++ G + + +L+ Y G
Sbjct: 498 NVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGG 539
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 127/261 (48%), Gaps = 7/261 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ V+ ++G A + S+MR G +P+ Y+ L+ + K +A
Sbjct: 493 YNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYA----KGGNVAGIAAIE 548
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++ G P+ V L+ A + R +D + F+E+ PD+ +N ++ Y K
Sbjct: 549 NEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAK 608
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-KPTLP 326
NGM + V +K + PD+IT+N L+D Y K + E++ L S+ KP +
Sbjct: 609 NGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVV 668
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
++N++I + K L +A+ V +M A P +TY ++ Y + S ARE+ +
Sbjct: 669 SYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYM 728
Query: 387 SKLG-KDMKVSTLNAMLEAYC 406
+ G K M++ T ++E+YC
Sbjct: 729 VQHGLKPMEL-TYRRVVESYC 748
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 147/353 (41%), Gaps = 44/353 (12%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMR-N 173
L + L S W L + RW K+ AD ++ +G++GQ L E
Sbjct: 110 LLKALELSGHWEWALALLRWAGKEG--AADASALEMVVRALGREGQHDAVCALLDETPLP 167
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ- 232
G R D Y T LH +A +AL F +++ + P +VTYN++L +
Sbjct: 168 PGSRLDVRAY----TTVLHALSRAGRYERALELFAELR-RQGVAPTLVTYNVVLDVYGRM 222
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
R+ ++ AL E+ + + PD +T + V+ A ++G++ E + +K+ P ++T
Sbjct: 223 GRSWPRIVALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVT 282
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N L+ +GK + + +V + + +P T+N + Y +A +A M
Sbjct: 283 YNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMA 342
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ P+ TY ++T YG NV +
Sbjct: 343 SKGLLPNAFTYNTVMTAYG---NVGKV--------------------------------D 367
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
EA LF+ G P+ +TY L+ K + ++ ++L M ++G PN+
Sbjct: 368 EALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNR 420
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 6/173 (3%)
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
F E++ G PD ++N++++ + K +KA F +K P+++TYN L+
Sbjct: 584 FQEVKARGYNPDLVIFNSMLSIYA----KNGMYSKATEVFDSIK-RSGLSPDLITYNSLM 638
Query: 228 RACAQARNVDQVNALFKELHES-ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
A+ + + +L S + PD+ +YN V++ + K G++KE + VLS M ++
Sbjct: 639 DMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGM 698
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
P +T++ L+ Y + F + +V ++ KP T+ ++ +Y +A+
Sbjct: 699 APCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAK 751
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 1/135 (0%)
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCD-NVSRAREIFDELSKLGKDMKVSTLNAM 401
+A +F ++ P+ +TY ++ +YG + R + DE+ G + T + +
Sbjct: 192 RALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTASTV 251
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ A C +GL EA FE+ G P TY L + + KA ++L MEQNG
Sbjct: 252 IAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGC 311
Query: 462 VPNKRFFLEALETFS 476
P+ + E T++
Sbjct: 312 QPDAVTYNELAGTYA 326
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 161/379 (42%), Gaps = 51/379 (13%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y L+ + K G T A+ L M CRP+ YN +I + K + + +A
Sbjct: 254 DVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLC----KDRQVTEA 309
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
F +M KG+ P+I TYN L+ A V L E+ S + P++ ++ V
Sbjct: 310 FNLFSEMITKGI---SPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTV 366
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+DA K GMI V+ M +PD++T+ L+D + R D+ +VF +++H
Sbjct: 367 VDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGC 426
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P + ++N +I Y + + KA + ++M+ +TY +I + + A
Sbjct: 427 VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIA 486
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMN--------------GLPTEADL----------- 416
+F E+ G+ + T +L+ C N G +AD+
Sbjct: 487 LFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMC 546
Query: 417 ----------LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK- 465
LF N + G+ PD TY ++ K + + KL ++M++NG +
Sbjct: 547 RAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGC 606
Query: 466 ------RFFLEALETFSSS 478
R FL + ETF ++
Sbjct: 607 IYNTIIRGFLRSNETFGAT 625
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 136/317 (42%), Gaps = 5/317 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++KL+ + K + L ++M + G PD N LI + H R A + L
Sbjct: 153 FTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFS-VLAKL 211
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K+ C+P+ T+N L+R + + LF + PD+ TY +M+ K
Sbjct: 212 LKLG----CQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 267
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G +L M C+P++I +N +IDS K + + +F ++ P + T
Sbjct: 268 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 327
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+NS+I + +M K P+ + + ++ ++ A ++ D +
Sbjct: 328 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 387
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
K G + V T A+++ +C+ EA +F+ + G P+ +Y +L Y + +
Sbjct: 388 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD 447
Query: 448 LVQKLLKRMEQNGIVPN 464
LL++M G++ +
Sbjct: 448 KAMGLLEQMSLQGLIAD 464
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 130/303 (42%), Gaps = 9/303 (2%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A + +++ GC+PD + +N LI L K + +AL F K G E +P++VTY
Sbjct: 204 AFSVLAKLLKLGCQPDNTTFNTLIRG-LCVEGK---IGEALHLFDKTIG-EGFQPDVVTY 258
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
L+ + N L + + + P++ YN ++D+ K+ + E ++ S M +
Sbjct: 259 GTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMIT 318
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
PDI T+N LI + + + + +++SK P + F++++ K +
Sbjct: 319 KGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAI 378
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAM 401
A V M P +TY + M G+C + A ++FD + G V + N +
Sbjct: 379 AHDVVDMMIKRGVEPDVVTYTAL--MDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNIL 436
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ YC +A L E G+ D+ TY L + L M +G
Sbjct: 437 INGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQ 496
Query: 462 VPN 464
+P+
Sbjct: 497 IPD 499
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 120/276 (43%), Gaps = 5/276 (1%)
Query: 135 MQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR 194
M +R D Y+ L+ + + A+ +F M + GC P+ YN LI +
Sbjct: 385 MMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYC--- 441
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
+ + + KA+G ++M ++ + VTYN L+ + ALF E+ S PD
Sbjct: 442 -QIQRMDKAMGLLEQMS-LQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPD 499
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
+ TY ++D KN + E +L ++ + DI+ +N+ ID + + +F
Sbjct: 500 LVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFS 559
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
+L +P + T+N MI K L +A +F+KM + Y II + +
Sbjct: 560 NLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSN 619
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
A ++ E+ G VST ++E +GL
Sbjct: 620 ETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDGL 655
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 113/253 (44%), Gaps = 8/253 (3%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P++ T NIL+ + R + ++ +L + PD T+N ++ G I E +
Sbjct: 183 PDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHL 242
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
+ +PD++T+ L++ K ++ +S++ +P + +N++I + K
Sbjct: 243 FDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCK 302
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL--GKDM-K 394
R +A +F +M +P TY +I + C N+ + + L+++ K M
Sbjct: 303 DRQVTEAFNLFSEMITKGISPDIFTYNSLI--HALC-NLCEWKHVTTLLNEMVNSKIMPN 359
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT-KANMKELVQKLL 453
V + +++A C G+ A + + GV PD TY L + ++ M E V K+
Sbjct: 360 VVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAV-KVF 418
Query: 454 KRMEQNGIVPNKR 466
M G VPN R
Sbjct: 419 DTMVHKGCVPNVR 431
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 109/265 (41%), Gaps = 1/265 (0%)
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L AL F +M M P+ V + LL + A+ ++ V +L ++ + PD+YT N
Sbjct: 131 LDDALSSFNRMLHMHP-PPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLN 189
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
+++++ + SVL+++ C+PD TFN LI + +F +
Sbjct: 190 ILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGE 249
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
+P + T+ +++ K A + + M P+ I Y II V+ A
Sbjct: 250 GFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEA 309
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+F E+ G + T N+++ A C L N + P+ + + A
Sbjct: 310 FNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDA 369
Query: 440 YTKANMKELVQKLLKRMEQNGIVPN 464
K M + ++ M + G+ P+
Sbjct: 370 LCKEGMIAIAHDVVDMMIKRGVEPD 394
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 7/203 (3%)
Query: 271 IKEMESVLS---RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+K +VLS +M S PD+ T N+LI+S+ + V L+ +P T
Sbjct: 163 MKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTT 222
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDE 385
FN++I G+A ++F K + P +TY + M G C N S A +
Sbjct: 223 FNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTL--MNGLCKVGNTSAAIRLLRS 280
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ + V N ++++ C + TEA LF G++PD TY L A
Sbjct: 281 MVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCE 340
Query: 446 KELVQKLLKRMEQNGIVPNKRFF 468
+ V LL M + I+PN F
Sbjct: 341 WKHVTTLLNEMVNSKIMPNVVVF 363
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 167/353 (47%), Gaps = 12/353 (3%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG-CRPDPSVYNALI 187
L++ R M+++ + Y +I+ K G+ A+ +F EM G +P+ +YNALI
Sbjct: 539 LDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALI 598
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKEL 246
+ D+ K L AL Y +M +ER + TYN+L+ A + L +E+
Sbjct: 599 GGYC---DQGK-LDTALLYRDRM--VERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM 652
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
LAPD++TYN +++ + K G +K+ + M + ++T+ LI + K+
Sbjct: 653 GGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQV 712
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ +++F + +P L +N++I ++ + +A + +M + P +TY +
Sbjct: 713 QETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTL 772
Query: 367 ITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
M G C V AR++ DE+++ G + T N ++ Y M G +A + N
Sbjct: 773 --MRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNK 830
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
G P TY L + K + + ++K M +NGI P+ ++ +E ++
Sbjct: 831 GFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTT 883
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 118/296 (39%), Gaps = 13/296 (4%)
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
TA LH A A A F M + R T+NI+LR A + L +++
Sbjct: 457 TASLHPLLSALPSAPAFALFADMFRL-RLPLCTTTFNIMLRHLCSAGKPARALELLRQMP 515
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS-NQCKPDIITFNLLIDSYGKRQAF 306
P+ TYN V+ + G ++ ++ M+ P+ T+ +I + K
Sbjct: 516 R----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRV 571
Query: 307 DKMEQVFKSLMHSKE-KPTLPTFNSMIINYGKARLQGKAEYVF---QKMTAMKYTPSFIT 362
D+ +VF ++ E KP +N++I Y QGK + +M + T
Sbjct: 572 DEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD---QGKLDTALLYRDRMVERGVAMTVAT 628
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y ++ + A E+ +E+ G V T N ++ +C G +A +FEN
Sbjct: 629 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 688
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
GV TY L A +K + KL + GI P+ + + + S+S
Sbjct: 689 RRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTS 744
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 167/354 (47%), Gaps = 12/354 (3%)
Query: 128 CLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG-CRPDPSVYNAL 186
L++ R M+++ + Y +I+ K G+ A+ +F EM G +P+ +YNAL
Sbjct: 164 ALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNAL 223
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKE 245
I + D+ K L AL Y +M +ER + TYN+L+ A + L +E
Sbjct: 224 IGGYC---DQGK-LDTALLYRDRM--VERGVAMTVATYNLLVHALFMDGRGTEAYELVEE 277
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ LAPD++TYN +++ + K G +K+ + M + ++T+ LI + K+
Sbjct: 278 MGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQ 337
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+ +++F + +P L +N++I ++ + +A + +M + P +TY
Sbjct: 338 VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNT 397
Query: 366 IITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+ M G C V AR++ DE+++ G + T N ++ Y M G +A + N
Sbjct: 398 L--MRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMN 455
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
G P TY L + K + + ++K M +NGI P+ ++ +E ++
Sbjct: 456 KGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTT 509
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 118/296 (39%), Gaps = 13/296 (4%)
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
TA LH A A A F M + R T+NI+LR A + L +++
Sbjct: 83 TASLHPLLSALPSAPAFALFADMFRL-RLPLCTTTFNIMLRHLCSAGKPARALELLRQMP 141
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS-NQCKPDIITFNLLIDSYGKRQAF 306
P+ TYN V+ + G ++ ++ M+ P+ T+ +I + K
Sbjct: 142 R----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRV 197
Query: 307 DKMEQVFKSLMHSKE-KPTLPTFNSMIINYGKARLQGKAEYVF---QKMTAMKYTPSFIT 362
D+ +VF ++ E KP +N++I Y QGK + +M + T
Sbjct: 198 DEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD---QGKLDTALLYRDRMVERGVAMTVAT 254
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y ++ + A E+ +E+ G V T N ++ +C G +A +FEN
Sbjct: 255 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 314
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
GV TY L A +K + KL + GI P+ + + + S+S
Sbjct: 315 RRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTS 370
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 144/316 (45%), Gaps = 5/316 (1%)
Query: 149 SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQ 208
S +IA G+ G A+ F +++ G P YNAL L KA +AL +
Sbjct: 164 STVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNAL----LQVFGKAGNYTEALRVLK 219
Query: 209 KMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
+M+ C+P+ VTYN L A+A ++ + L P+ +TYN VM AY
Sbjct: 220 EMED-SGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANV 278
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
G + E ++ RMK N P++ T+NL+ GK+ F M ++ + + S P T+
Sbjct: 279 GRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTW 338
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
N+M+ GK ++ V M + S TY +I+ YG C + + A +++DE+
Sbjct: 339 NTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMIS 398
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
G ++T NA+L G + A + G P+ +Y LL + Y K
Sbjct: 399 SGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAG 458
Query: 449 VQKLLKRMEQNGIVPN 464
++ + K + I P+
Sbjct: 459 IESIEKEVYVGTIFPS 474
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 139/320 (43%), Gaps = 4/320 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ ++ + + G+ A+ LF+E+R G P YN ++ + ++ +
Sbjct: 88 DVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRM---GRSWPRI 144
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ ++M+ +P+ T + ++ AC + +DQ A F++L P + TYN ++
Sbjct: 145 VALLEEMRA-AGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQ 203
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+GK G E VL M+ + C+PD +T+N L +Y + F++ + ++ P
Sbjct: 204 VFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLP 263
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T+N+++ Y +A +F +M Y P+ TY I M G + E+
Sbjct: 264 NTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEML 323
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+E+S+ G T N ML G+ + + GV TY L AY +
Sbjct: 324 EEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRC 383
Query: 444 NMKELVQKLLKRMEQNGIVP 463
+ K+ M +G P
Sbjct: 384 GSRTYAFKMYDEMISSGFTP 403
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 164/351 (46%), Gaps = 15/351 (4%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
+ +G+ D + L +F M+K Y+ + Y+ + ++GKK + + + EM SG
Sbjct: 275 YANVGRVD---EALALFDRMKKNG-YVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSG 330
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV--TYNILLRACAQA 233
C P+ +N ++ A R + + L GM+ C + TYN L+ A +
Sbjct: 331 CTPNRVTWNTML-AVCGKRGMEDYVTRVL------NGMKSCGVELSRDTYNTLISAYGRC 383
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ ++ E+ S P + TYN +++ + G +S++S+M N KP+ ++
Sbjct: 384 GSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSY 443
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII-NYGKARLQGKAEYVFQKMT 352
+LL+ Y K +E + K + P+ +++I N+ RL+G E FQ++
Sbjct: 444 SLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEG-VEKAFQEVK 502
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
A Y P + + ++ MY S+A E+FD + + G + T N++++ Y +
Sbjct: 503 AQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESW 562
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
EA+ + + + V PD +Y + + K + + Q++L M +G+ P
Sbjct: 563 EAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAP 613
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 154/349 (44%), Gaps = 23/349 (6%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K R ++ Y+ L+ V GK G A+ + EM +SGC+PD YN L
Sbjct: 187 KARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNEL---------- 236
Query: 197 AKALAKALGYFQKM---------KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
A A+A G+F++ KG+ PN TYN ++ A A VD+ ALF +
Sbjct: 237 AGTYARA-GFFEEAAKCLDTMTSKGL---LPNTFTYNTVMTAYANVGRVDEALALFDRMK 292
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
++ P++ TYN + GK M +L M + C P+ +T+N ++ GKR D
Sbjct: 293 KNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMED 352
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
+ +V + + + T+N++I YG+ + A ++ +M + +TP TY ++
Sbjct: 353 YVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALL 412
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
+ + S A+ I ++ K G + + +L+ Y G + + + + +
Sbjct: 413 NVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIF 472
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
P + L A K E V+K + ++ G P+ F L ++
Sbjct: 473 PSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYA 521
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 163/381 (42%), Gaps = 51/381 (13%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMR-NSGCRPDP 180
S W L + RW + AD ++ +G++GQ + L EM G R D
Sbjct: 32 SGHWEWALALLRWASDEG--AADAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDV 89
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ-ARNVDQV 239
Y T LH +A +AL F +++ + P IVTYN++L + R+ ++
Sbjct: 90 RAY----TTVLHALSRAGRYERALQLFAELR-RQGVVPTIVTYNVVLDVYGRMGRSWPRI 144
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
AL +E+ + + PD +T + V+ A G++G++ + + +K+ P ++T+N L+
Sbjct: 145 VALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQV 204
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
+GK + + +V K + S +P T+N + Y +A +A MT+ P+
Sbjct: 205 FGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPN 264
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
TY ++T Y NV R EA LF+
Sbjct: 265 TFTYNTVMTAYA---NVGRV--------------------------------DEALALFD 289
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSL 479
G P+ +TY L++ K + + ++L+ M ++G PN+ T+++ L
Sbjct: 290 RMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRV-------TWNTML 342
Query: 480 AGSQSGSAKTDLTRSLSTAKS 500
A + +TR L+ KS
Sbjct: 343 AVCGKRGMEDYVTRVLNGMKS 363
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 132/287 (45%), Gaps = 31/287 (10%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA---------- 197
Y+ L+ V+ ++G A + S+M +G +P+ Y+ L+ + + A
Sbjct: 408 YNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVY 467
Query: 198 -----------KALAKALGYFQKMKGMERC---------KPNIVTYNILLRACAQARNVD 237
+ L A ++++G+E+ KP++V +N +L A+
Sbjct: 468 VGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYS 527
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ +F + +S L+PD+ TYN +MD Y K+ E E +L ++KS+Q KPD++++N +I
Sbjct: 528 KATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVI 587
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+ + K+ + +++ ++ P + T+++++ Y + +A V M
Sbjct: 588 NGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLK 647
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
P +TY ++ Y ARE E+S ++ L MLEA
Sbjct: 648 PMELTYRRVVDSYCKAKRYDEAREFLSEISDTDQNFD-QKLQHMLEA 693
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 147/311 (47%), Gaps = 9/311 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI+ G+ G A ++ EM +SG P + YNAL+ ++ +R + A+++
Sbjct: 373 YNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALL--NVLSRQGDWSTAQSIVSK 430
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
G KPN +Y++LL+ A+ N + ++ KE++ + P ++ A K
Sbjct: 431 MLKNGF---KPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFK 487
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
++ +E +K+ KPD++ FN ++ Y K + K ++F S+ S P L T
Sbjct: 488 CRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLIT 547
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDE 385
+NS++ Y K+ +AE + +++ + + P ++Y +I G+C + A+ I E
Sbjct: 548 YNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVIN--GFCKQGLIKEAQRILSE 605
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ G V T + ++ Y + EA + + + P TY+ + +Y KA
Sbjct: 606 MIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKR 665
Query: 446 KELVQKLLKRM 456
+ ++ L +
Sbjct: 666 YDEAREFLSEI 676
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 157/333 (47%), Gaps = 7/333 (2%)
Query: 134 WMQKQRWYIADTGI--YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
WM+K + + YS +I + K A+ LF MR+ G P YN+LI
Sbjct: 231 WMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMC 290
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
++ +A F++M KP++VT++IL+ A + V + ++F ++ + +
Sbjct: 291 NSGQWKQASI----LFKEMLEWNM-KPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAM 345
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
PDI TY+ ++ K+ + KE ++L+ M S +PD++TF++ +D + K+ + +
Sbjct: 346 EPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQS 405
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+ ++ +P + T+NS++ Y +A VF M P ++Y +I Y
Sbjct: 406 IINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYC 465
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ + A+++FDE+S G T ++ C G P A LF+ + G PD
Sbjct: 466 KSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLI 525
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
TY L + K + L + ++++ + PN
Sbjct: 526 TYSTLLSGFCKHGHLDEALALFEALKKSQLKPN 558
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 153/317 (48%), Gaps = 5/317 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI M GQ + A LF EM +PD ++ L+ A K + +AL F
Sbjct: 282 YNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALC----KEGVVLEALSVF 337
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
KM + +P+IVTY+ L+ ++ + + L E+ + PD+ T++ +D + K
Sbjct: 338 GKMIQIAM-EPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCK 396
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
GM+ E +S+++ M +P+++T+N L+D Y D+ +VF +++ P + +
Sbjct: 397 KGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLS 456
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N +I Y K+ +A+ +F +M+ TP+ IT+ +I+ A+E+F ++
Sbjct: 457 YNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMG 516
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G + T + +L +C +G EA LFE + P+ K+L KA E
Sbjct: 517 SHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLE 576
Query: 448 LVQKLLKRMEQNGIVPN 464
++L + + P+
Sbjct: 577 DAKELFSSLSIEELQPD 593
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 143/286 (50%), Gaps = 5/286 (1%)
Query: 180 PSVY-NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
P+VY + +I L K A A+ + +KM ++ C+P +V+Y+I++ + + R V++
Sbjct: 207 PTVYTHTMIVNGLCKIGKTSA---AIVWMKKMVELD-CEPEVVSYSIIIDSLCKNRLVNE 262
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
LF + ++P + TYN ++ +G K+ + M KPD++TF++L+D
Sbjct: 263 AVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVD 322
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
+ K + VF ++ +P + T++S+I K+ L ++ + +M + P
Sbjct: 323 ALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRP 382
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+T+ + ++ VS A+ I + + + G V T N++++ YC++ EA +F
Sbjct: 383 DVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVF 442
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ N G PD +Y +L K Y K+ + ++L M G+ PN
Sbjct: 443 DIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPN 488
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/347 (19%), Positives = 134/347 (38%), Gaps = 76/347 (21%)
Query: 193 TRDKAKA-----LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE-- 245
RDK K AL YF +M M P I +N LL A + ++ D V +++++
Sbjct: 73 VRDKCKGGSFSNFDDALAYFNQMVHMNP-FPCITQFNQLLAALVRMKHYDSVVSIYRKME 131
Query: 246 -------------------------LHESILA--------PDIYTYNGVMDAYGKNGMIK 272
L S+L P I T+N +++ G I
Sbjct: 132 FFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIV 191
Query: 273 E----MESVLSR-------------------------------MKSNQCKPDIITFNLLI 297
E ++ ++SR M C+P++++++++I
Sbjct: 192 EAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIII 251
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
DS K + ++ +F + PT+ T+NS+I + +A +F++M
Sbjct: 252 DSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMK 311
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P +T+ ++ V A +F ++ ++ + + T ++++ C + L E+ L
Sbjct: 312 PDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTL 371
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ + PD T+ + + K M Q ++ M + G+ PN
Sbjct: 372 LNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPN 418
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 32/155 (20%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALGY------------------ 206
+F M N GC PD YN LI + + D+AK L + +
Sbjct: 441 VFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLC 500
Query: 207 -----------FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
F+KM G C P+++TY+ LL + ++D+ ALF+ L +S L P+
Sbjct: 501 QAGRPYAAKELFKKM-GSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNH 559
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
++ K G +++ + + S + + +PD+
Sbjct: 560 VICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 166/360 (46%), Gaps = 48/360 (13%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + K G TR A+ L ++ +P+ +Y+ +I A K + +++A G F
Sbjct: 415 YATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALC----KYQLVSEAYGLF 470
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M KG+ ++VTY+ L+ + + L E+ + PD+ TY ++DA
Sbjct: 471 SEMTVKGIS---ADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDAL 527
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
GK G +KE +SVL+ M KPD+ T+N L++ Y K + VF ++ P +
Sbjct: 528 GKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDV 587
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIF 383
T+ +I + K+++ +A +F++M P +TY ++ G C + +S ++
Sbjct: 588 HTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVD--GLCKSGRISYVWDLI 645
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
DE+ G+ V T N++++ C NG +A LF + G+ P++ T+ +L K
Sbjct: 646 DEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKG 705
Query: 444 ----NMKELVQKL-------------------------------LKRMEQNGIVPNKRFF 468
+ +E+ Q L L +ME+NG +PN F
Sbjct: 706 GRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTF 765
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 138/322 (42%), Gaps = 9/322 (2%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
AD YS LI G+ + A+ L +EM PD Y L+ A L K K
Sbjct: 480 ADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDA-LGKEGKVKEAKS 538
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
L K KP++ TYN L+ V + +F + + PD++TY ++
Sbjct: 539 VLAVMLK----ACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILI 594
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+ + K+ M+ E ++ M PD +T++ L+D K + + + +
Sbjct: 595 NGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQP 654
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAR 380
+ T+NS+I K KA +F KM P+ T+ I + G C + A+
Sbjct: 655 ADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFT--ILLDGLCKGGRLKDAQ 712
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
E+F +L G + V N M+ +C GL EA + G P++ T+ ++ A
Sbjct: 713 EVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINAL 772
Query: 441 TKANMKELVQKLLKRMEQNGIV 462
K + + +KLL++M G++
Sbjct: 773 FKKDENDKAEKLLRQMIARGLL 794
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 147/331 (44%), Gaps = 14/331 (4%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+R Y DT + LI + KGQ + A+ ++ G + + Y LI D
Sbjct: 56 KRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTR 115
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
A+ + +K+ G KPN+ YN ++ A + + V + LF E+ ++ ++ T
Sbjct: 116 AAIK----FLRKIDG-RLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVT 170
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y+ ++ + G +KE +L+ M P++ T+N+L+D+ K + + V ++
Sbjct: 171 YSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVML 230
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
+ K + T+++++ Y KA++VF M+ M TP +Y +I + V
Sbjct: 231 KACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVD 290
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYC-MNGLPTEADLLFENSHNM---GVTPDSSTY 433
+A +F E+ L + + N +L+++ M T L SH + G+ PD T
Sbjct: 291 KALNLFKEMI-LSRFPPIIQFNKILDSFAKMKHYSTAVSL----SHRLELKGIQPDLFTL 345
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+L + +L ++ + G P+
Sbjct: 346 NILINCFCHMGQITFGFSVLAKILKRGYPPS 376
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 139/322 (43%), Gaps = 6/322 (1%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ +I + K A LFSEM G + Y+ LI L +ALG
Sbjct: 135 MYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFC----IVGKLKEALGL 190
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
M ++ PN+ TYNIL+ A + V + ++ + ++ + ++ TY+ +MD Y
Sbjct: 191 LNVMV-LKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYF 249
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+K+ + V + M PD+ ++N++I+ + K + DK +FK ++ S+ P +
Sbjct: 250 LVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPII- 308
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
FN ++ ++ K + A + ++ P T +I + + ++ + ++
Sbjct: 309 QFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKI 368
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
K G TLN +++ C+ G +A + G + +Y L K
Sbjct: 369 LKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDT 428
Query: 447 ELVQKLLKRMEQNGIVPNKRFF 468
KLL++++ PN +
Sbjct: 429 RGAIKLLRKIDGRLTKPNVEMY 450
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 40/181 (22%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
+ R AD Y+ LI + K G A+ LF++M++ G R
Sbjct: 649 RDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIR------------------- 689
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
PN T+ ILL + + +F++L D+Y
Sbjct: 690 ---------------------PNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVY 728
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
YN ++ + K G+++E ++LS+M+ N C P+ +TF+++I++ K+ DK E++ + +
Sbjct: 729 IYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQM 788
Query: 317 M 317
+
Sbjct: 789 I 789
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 139/356 (39%), Gaps = 45/356 (12%)
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
+ + A +F+ M G PD YN +I K K + KAL F++M + R P
Sbjct: 253 EVKKAQHVFNAMSLMGVTPDVHSYNIMINGFC----KIKRVDKALNLFKEMI-LSRFPP- 306
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
I+ +N +L + A+ ++ +L L + PD++T N +++ + G I SVL+
Sbjct: 307 IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLA 366
Query: 280 RMKSNQCKPDIITFNLLIDSYGKR---------------QAFDKMEQVFKSLMHSK---- 320
++ P +T N LI + Q F + + +L++
Sbjct: 367 KILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIG 426
Query: 321 ----------------EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
KP + ++++I K +L +A +F +MT + +TY
Sbjct: 427 DTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYS 486
Query: 365 CIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
+I YG+C + A + +E+ + V T +++A G EA +
Sbjct: 487 TLI--YGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVML 544
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
V PD TY L Y + Q + M G+ P+ + + F S
Sbjct: 545 KACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKS 600
>gi|302780869|ref|XP_002972209.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
gi|300160508|gb|EFJ27126.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
Length = 363
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 116/243 (47%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+PN+VTYN L+ VD L +E+ + PDI TYN ++D K G + E+
Sbjct: 7 EPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEVNR 66
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+ MK+ C PD+IT++ LI + K + +F ++ P + TF +++ Y
Sbjct: 67 LFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGYC 126
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
A L AE + +++ A +P TY ++ + + A + ++K V
Sbjct: 127 NAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQPNVV 186
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
A+++A+C G PT A L E GV P++ TY+ L + E K+L+R+
Sbjct: 187 IYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTGDLEEAHKMLERL 246
Query: 457 EQN 459
E+N
Sbjct: 247 ERN 249
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 124/277 (44%), Gaps = 8/277 (2%)
Query: 165 MWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYN 224
+ L EM +GC PD + YN LI K + + F +MK + C P+++TY+
Sbjct: 30 LLLMEEMTATGCLPDINTYNTLIDGLC----KTGRVPEVNRLFGEMKA-KFCNPDVITYS 84
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
L+ + ++ LF ++ + PD+ T+ +++ Y G++ + E +L + ++
Sbjct: 85 CLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGYCNAGLVDDAERLLEEIVAS 144
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
C PD+ T+ L+D + K + + +V K + + +P + + ++I + A A
Sbjct: 145 DCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQPNVVIYTALIDAFCSAGKPTVA 204
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL--NAML 402
+ ++M P+ ITY +I + ++ A ++ + L + ++ K M+
Sbjct: 205 YKLLEEMVGNGVQPNAITYRSLIGGFCGTGDLEEAHKMLERLER-NENCKADMFAYRVMM 263
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+ C G + A L E G P Y L +
Sbjct: 264 DGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRG 300
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 121/276 (43%), Gaps = 25/276 (9%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ D Y+ LI + K G+ LF EM+ C PD Y+ LI K +
Sbjct: 42 LPDINTYNTLIDGLCKTGRVPEVNRLFGEMKAKFCNPDVITYSCLIGGFC----KLDRIN 97
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
A F M + P++VT+ L+ A VD L +E+ S +PD+YTY +
Sbjct: 98 MACTLFDDML-KQAALPDVVTFPTLVEGYCNAGLVDDAERLLEEIVASDCSPDVYTYTSL 156
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+D + K + E VL RM +C+P+++ + LID++ ++ + ++ +
Sbjct: 157 VDGFCKVKRMVEAHRVLKRMAKGECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGV 216
Query: 322 KPTLPTFNSMIINY-GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P T+ S+I + G L+ +A + +++ + C M+ Y R
Sbjct: 217 QPNAITYRSLIGGFCGTGDLE-EAHKMLERLERNE--------NCKADMFAY-------R 260
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
+ D L + G ++S +LEA +G P D+
Sbjct: 261 VMMDGLCRTG---RMSAALELLEAIKQSGTPPRHDI 293
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 86/192 (44%)
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
+P+++T+N LI + D + + + + P + T+N++I K +
Sbjct: 7 EPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEVNR 66
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+F +M A P ITY C+I + D ++ A +FD++ K V T ++E YC
Sbjct: 67 LFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEGYC 126
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
GL +A+ L E +PD TY L + K ++LKRM + PN
Sbjct: 127 NAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQPNVV 186
Query: 467 FFLEALETFSSS 478
+ ++ F S+
Sbjct: 187 IYTALIDAFCSA 198
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 55/130 (42%), Gaps = 4/130 (3%)
Query: 351 MTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
MT P+ +TY +I +G+C + V + +E++ G ++T N +++ C
Sbjct: 1 MTIWGIEPNMVTYNSLI--HGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKT 58
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G E + LF PD TY L + K + + L M + +P+ F
Sbjct: 59 GRVPEVNRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTF 118
Query: 469 LEALETFSSS 478
+E + ++
Sbjct: 119 PTLVEGYCNA 128
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 165/374 (44%), Gaps = 12/374 (3%)
Query: 106 VVRSEHCFLLFEELGKSD-KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLA 164
VV C F + GK D W + F M K + D Y+ +I V+ K + A
Sbjct: 270 VVLYNVCIDCFGKAGKVDMAW----KFFHEM-KANGLVLDDVTYTSMIGVLCKADRLNEA 324
Query: 165 MWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYN 224
+ LF M + P YN +I + A + L Q+ KG C P++V+YN
Sbjct: 325 VELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYS--LLERQRRKG---CIPSVVSYN 379
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
+L + VD+ F+E+ + + P++ TYN ++D K G ++ V MK
Sbjct: 380 CILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDA 438
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
P++IT N+++D K Q D +F+ L H +P T+ S+I G+ +A
Sbjct: 439 GLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEA 498
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
++++M P+ + Y +I + C +I++E+ +LG + LN ++
Sbjct: 499 YKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDC 558
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G + LF+ N+G PD+ +Y +L KA +L M++ G V +
Sbjct: 559 VFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLD 618
Query: 465 KRFFLEALETFSSS 478
R + ++ F S
Sbjct: 619 TRAYNTVIDGFCKS 632
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 127/290 (43%), Gaps = 9/290 (3%)
Query: 157 KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERC 216
K G+ LF E++N G PD Y LI H KA +A F MK + C
Sbjct: 561 KAGEIEKGRALFQEIKNLGFIPDARSYTILI----HGLVKAGFAHEAYELFYTMKE-QGC 615
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+ YN ++ ++ V++ L +E+ P + TY V+D K + E
Sbjct: 616 VLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYM 675
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+ KS + +++ ++ LID +GK D+ + + LM P + T+N ++
Sbjct: 676 LFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALV 735
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMK 394
KA +A FQ M +K TP++ITY I ++G C ++A + E+ K G
Sbjct: 736 KAEEISEALVCFQSMKDLKCTPNYITYS--ILIHGLCKIRKFNKAFVFWQEMQKQGFKPN 793
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
V T M+ G EAD LFE G DS+ Y + + + AN
Sbjct: 794 VFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNAN 843
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 139/313 (44%), Gaps = 9/313 (2%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K +I D Y+ LI + K G A LF M+ GC D YN +I K
Sbjct: 576 KNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFC----K 631
Query: 197 AKALAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
+ + KA ++MK G E P +VTY ++ A+ +D+ LF+E + +
Sbjct: 632 SGKVNKAYQLLEEMKTKGHE---PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELN 688
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
+ Y+ ++D +GK G I E ++ + P++ T+N L+D+ K + + F+
Sbjct: 689 VVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQ 748
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
S+ K P T++ +I K R KA +Q+M + P+ TY +I+
Sbjct: 749 SMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAG 808
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
N+ A +F++ + G + NA++E ++A LFE + G + + T
Sbjct: 809 NIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCV 868
Query: 435 LLYKAYTKANMKE 447
+L + KA E
Sbjct: 869 VLLDSLHKAECIE 881
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 147/345 (42%), Gaps = 7/345 (2%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L K+D+ + +E+F M + + + Y+ +I G G+ A L R GC P
Sbjct: 315 LCKADRLNEAVELFEHMDQNKQ-VPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIP 373
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
YN + L + + +AL F++MK + PN+ TYNI++ +A ++
Sbjct: 374 SVVSYNCI----LSCLGRKGQVDEALKKFEEMK--KDAIPNLSTYNIMIDMLCKAGKLET 427
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+ + ++ L P++ T N ++D K + + S+ + C+PD +T+ LI+
Sbjct: 428 ALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIE 487
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
G+ D+ ++++ ++ + + P + S+I N+ K + ++ +M + +P
Sbjct: 488 GLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSP 547
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+ + + + R +F E+ LG + ++ G EA LF
Sbjct: 548 DLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELF 607
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
G D+ Y + + K+ +LL+ M+ G P
Sbjct: 608 YTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEP 652
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 141/323 (43%), Gaps = 9/323 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y LI +G+ G+ A L+ +M ++ P+ VY +LI R+ K K
Sbjct: 478 DAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI------RNFFKCGRKE 531
Query: 204 LGY--FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
G+ + +M + C P+++ N + +A +++ ALF+E+ PD +Y +
Sbjct: 532 DGHKIYNEMLRL-GCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTIL 590
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ K G E + MK C D +N +ID + K +K Q+ + +
Sbjct: 591 IHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGH 650
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
+PT+ T+ S+I K +A +F++ + + + Y +I +G + A
Sbjct: 651 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYL 710
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
I +EL + G V T N +L+A +EA + F++ ++ TP+ TY +L
Sbjct: 711 IMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLC 770
Query: 442 KANMKELVQKLLKRMEQNGIVPN 464
K + M++ G PN
Sbjct: 771 KIRKFNKAFVFWQEMQKQGFKPN 793
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 127/287 (44%), Gaps = 6/287 (2%)
Query: 157 KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERC 216
K + R A MR RP S Y LI A +RD L FQ+M+ +
Sbjct: 177 KSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLT----LFQQMQELGY- 231
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
N+ + L+R A+ VD +L E+ + L PD+ YN +D +GK G +
Sbjct: 232 AVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWK 291
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
MK+N D +T+ +I K ++ ++F+ + +K+ P +N+MI+ YG
Sbjct: 292 FFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYG 351
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
A A + ++ PS ++Y CI++ G V A + F+E+ K +S
Sbjct: 352 MAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLS 410
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
T N M++ C G A ++ + + G+ P+ T ++ KA
Sbjct: 411 TYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKA 457
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 153/364 (42%), Gaps = 6/364 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L E LG+ + + +++ M I + +Y+ LI K G+ +++EM
Sbjct: 485 LIEGLGRHGRVDEAYKLYEQMLDANQ-IPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRL 543
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC PD L+ ++ KA + K FQ++K + P+ +Y IL+ +A
Sbjct: 544 GCSPDL----LLLNTYMDCVFKAGEIEKGRALFQEIKNLGFI-PDARSYTILIHGLVKAG 598
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ LF + E D YN V+D + K+G + + +L MK+ +P ++T+
Sbjct: 599 FAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYG 658
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+ID K D+ +F+ + + ++S+I +GK +A + +++
Sbjct: 659 SVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQK 718
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
TP+ T+ C++ + +S A F + L T + ++ C +A
Sbjct: 719 GLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKA 778
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
+ ++ G P+ TY + KA L ++ ++ G V + + +E
Sbjct: 779 FVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEG 838
Query: 475 FSSS 478
S++
Sbjct: 839 LSNA 842
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 166/384 (43%), Gaps = 15/384 (3%)
Query: 107 VRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMW 166
V S +C L LG+ + + L+ F M+K I + Y+ +I ++ K G+ A+
Sbjct: 375 VVSYNCIL--SCLGRKGQVDEALKKFEEMKKDA--IPNLSTYNIMIDMLCKAGKLETALV 430
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
+ M+++G P+ N ++ KA+ L A F+ + + C+P+ VTY L
Sbjct: 431 VRDAMKDAGLFPNVITVNIMVDRLC----KAQRLDDACSIFEGLD-HKTCRPDAVTYCSL 485
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+ + VD+ L++++ ++ P+ Y ++ + K G ++ + + M C
Sbjct: 486 IEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGC 545
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
PD++ N +D K +K +F+ + + P ++ +I KA +A
Sbjct: 546 SPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYE 605
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+F M Y +I + V++A ++ +E+ G + V T ++++
Sbjct: 606 LFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLA 665
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK- 465
EA +LFE + + G+ + Y L + K + +++ + Q G+ PN
Sbjct: 666 KIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVY 725
Query: 466 --RFFLEAL---ETFSSSLAGSQS 484
L+AL E S +L QS
Sbjct: 726 TWNCLLDALVKAEEISEALVCFQS 749
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 96/254 (37%), Gaps = 61/254 (24%)
Query: 94 EPLVRT----LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYS 149
EP V T ++ K+ R + ++LFEE K + + IYS
Sbjct: 651 EPTVVTYGSVIDGLAKIDRLDEAYMLFEE-----------------AKSKGIELNVVIYS 693
Query: 150 KLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQK 209
LI GK G+ A + E+ G P+ +N L+ A + KA+ +++AL FQ
Sbjct: 694 SLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALV----KAEEISEALVCFQS 749
Query: 210 MKGMERC-----------------------------------KPNIVTYNILLRACAQAR 234
MK + +C KPN+ TY ++ A+A
Sbjct: 750 MKDL-KCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAG 808
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
N+ + + LF++ E D YN +++ + + + C T
Sbjct: 809 NIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCV 868
Query: 295 LLIDSYGKRQAFDK 308
+L+DS K + ++
Sbjct: 869 VLLDSLHKAECIEQ 882
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 158/332 (47%), Gaps = 6/332 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+S LI+ G+ G A+ +F+ M+ G RP+ YNA+I A + K +AK +F
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAK---FF 327
Query: 208 QKMKGMERC-KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+M+ C +P+ +T+N LL C++ + LF E+ + D+++YN ++DA
Sbjct: 328 DEMQ--RNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAIC 385
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K G + +L++M + + P++++++ +ID + K FD+ +F + +
Sbjct: 386 KGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRV 445
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
++N+++ Y K +A + ++M ++ +TY ++ YG +++F E+
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEM 505
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
+ + T + +++ Y GL EA +F + G+ D Y L A K +
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLV 565
Query: 447 ELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
L+ M + GI PN + ++ F S
Sbjct: 566 GSAVSLIDEMTKEGISPNVVTYNSIIDAFGRS 597
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 151/353 (42%), Gaps = 27/353 (7%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
W +F M +R D Y+ L+ + K GQ LA + ++M P+ Y+
Sbjct: 355 WEAARNLFDEMSNRR-IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYS 413
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
+I KA +AL F +M+ + + V+YN LL + ++ + +
Sbjct: 414 TVIDGFA----KAGRFDEALNLFGEMRYLN-IALDRVSYNTLLSIYTKVGRSEEALDILR 468
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
E+ + D+ TYN ++ YGK G E++ V + MK P+++T++ LID Y K
Sbjct: 469 EMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGG 528
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
+ + +VF+ + + + ++++I K L G A + +MT +P+ +TY
Sbjct: 529 LYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYN 588
Query: 365 CIITMYGYCDNVSRARE------------IFDELSKLGKDMKV-------STLNAMLEAY 405
II +G + R+ + EL++ + + S N +
Sbjct: 589 SIIDAFGRSATMERSADYSNGGSLPFSSSALSELTETEGNRVIQLFGQLTSEGNNRMTKD 648
Query: 406 CMNGLPTEADLL--FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
C G+ + +L F H + + P+ T+ + A ++ N E LL+ +
Sbjct: 649 CKEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEEL 701
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 113/268 (42%), Gaps = 43/268 (16%)
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK-RQAFDKMEQVF 313
+Y ++ ++ AYG++G+ +E SV + MK +P+++T+N +ID+ GK F ++ + F
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT--------------------- 352
+ + +P TFNS++ + L A +F +M+
Sbjct: 328 DEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKG 387
Query: 353 --------------AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
A + P+ ++Y +I + A +F E+ L + +
Sbjct: 388 GQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSY 447
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N +L Y G EA + ++G+ D TY L Y K + V+K+ M++
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKR 507
Query: 459 NGIVPNKRFFLEALETFSSSLAGSQSGS 486
++PN L T+S+ + G G
Sbjct: 508 EHVLPN-------LLTYSTLIDGYSKGG 528
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 165/374 (44%), Gaps = 12/374 (3%)
Query: 106 VVRSEHCFLLFEELGKSD-KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLA 164
VV C F + GK D W + F M K + D Y+ +I V+ K + A
Sbjct: 270 VVLYNVCIDCFGKAGKVDMAW----KXFHEM-KANGLVLDDVTYTSMIGVLCKADRLNEA 324
Query: 165 MWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYN 224
+ LF M + P YN +I + A + L Q+ KG C P++V+YN
Sbjct: 325 VELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYS--LLERQRRKG---CIPSVVSYN 379
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
+L + VD+ F+E+ + + P++ TYN ++D K G ++ V MK
Sbjct: 380 CILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDA 438
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
P++IT N+++D K Q D +F+ L H +P T+ S+I G+ +A
Sbjct: 439 GLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEA 498
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
++++M P+ + Y +I + C +I++E+ +LG + LN ++
Sbjct: 499 YKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDC 558
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G + LF+ N+G PD+ +Y +L KA +L M++ G V +
Sbjct: 559 VFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLD 618
Query: 465 KRFFLEALETFSSS 478
R + ++ F S
Sbjct: 619 TRAYNTVIDGFCKS 632
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 127/290 (43%), Gaps = 9/290 (3%)
Query: 157 KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERC 216
K G+ LF E++N G PD Y LI H KA +A F MK + C
Sbjct: 561 KAGEIEKGRALFQEIKNLGFIPDARSYTILI----HGLVKAGFAHEAYELFYTMKE-QGC 615
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+ YN ++ ++ V++ L +E+ P + TY V+D K + E
Sbjct: 616 VLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYM 675
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+ KS + +++ ++ LID +GK D+ + + LM P + T+N ++
Sbjct: 676 LFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALV 735
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMK 394
KA +A FQ M +K TP++ITY I ++G C ++A + E+ K G
Sbjct: 736 KAEEISEALVCFQSMKDLKCTPNYITYS--ILIHGLCKIRKFNKAFVFWQEMQKQGFKPN 793
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
V T M+ G EAD LFE G DS+ Y + + + AN
Sbjct: 794 VFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNAN 843
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 139/313 (44%), Gaps = 9/313 (2%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K +I D Y+ LI + K G A LF M+ GC D YN +I K
Sbjct: 576 KNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFC----K 631
Query: 197 AKALAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
+ + KA ++MK G E P +VTY ++ A+ +D+ LF+E + +
Sbjct: 632 SGKVNKAYQLLEEMKTKGHE---PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELN 688
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
+ Y+ ++D +GK G I E ++ + P++ T+N L+D+ K + + F+
Sbjct: 689 VVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQ 748
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
S+ K P T++ +I K R KA +Q+M + P+ TY +I+
Sbjct: 749 SMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAG 808
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
N+ A +F++ + G + NA++E ++A LFE + G + + T
Sbjct: 809 NIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCV 868
Query: 435 LLYKAYTKANMKE 447
+L + KA E
Sbjct: 869 VLLDSLHKAECIE 881
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 147/345 (42%), Gaps = 7/345 (2%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L K+D+ + +E+F M + + + Y+ +I G G+ A L R GC P
Sbjct: 315 LCKADRLNEAVELFEHMDQNKQ-VPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIP 373
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
YN + L + + +AL F++MK + PN+ TYNI++ +A ++
Sbjct: 374 SVVSYNCI----LSCLGRKGQVDEALKKFEEMK--KDAIPNLSTYNIMIDMLCKAGKLET 427
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+ + ++ L P++ T N ++D K + + S+ + C+PD +T+ LI+
Sbjct: 428 ALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIE 487
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
G+ D+ ++++ ++ + + P + S+I N+ K + ++ +M + +P
Sbjct: 488 GLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSP 547
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+ + + + R +F E+ LG + ++ G EA LF
Sbjct: 548 DLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELF 607
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
G D+ Y + + K+ +LL+ M+ G P
Sbjct: 608 YTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEP 652
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 169/394 (42%), Gaps = 23/394 (5%)
Query: 73 KSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVF 132
K+ +LE+ +VR M+ + P V T+N ++ + L K+ + +F
Sbjct: 421 KAGKLETALVVRDAMKD-AGLFPNVITVN------------IMVDRLCKAQRLDDACSIF 467
Query: 133 RWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH 192
+ + D Y LI +G+ G+ A L+ +M ++ P+ VY +LI
Sbjct: 468 EGLDHKTCR-PDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI----- 521
Query: 193 TRDKAKALAKALGY--FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
R+ K K G+ + +M + C P+++ N + +A +++ ALF+E+
Sbjct: 522 -RNFFKCGRKEDGHKIYNEMLRL-GCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLG 579
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
PD +Y ++ K G E + MK C D +N +ID + K +K
Sbjct: 580 FIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAY 639
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
Q+ + + +PT+ T+ S+I K +A +F++ + + + Y +I +
Sbjct: 640 QLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGF 699
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
G + A I +EL + G V T N +L+A +EA + F++ ++ TP+
Sbjct: 700 GKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNY 759
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
TY +L K + M++ G PN
Sbjct: 760 ITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPN 793
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 127/287 (44%), Gaps = 6/287 (2%)
Query: 157 KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERC 216
K + R A MR RP S Y LI A +RD L FQ+M+ +
Sbjct: 177 KSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLT----LFQQMQELGY- 231
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
N+ + L+R A+ VD +L E+ + L PD+ YN +D +GK G +
Sbjct: 232 AVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWK 291
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
MK+N D +T+ +I K ++ ++F+ + +K+ P +N+MI+ YG
Sbjct: 292 XFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYG 351
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
A A + ++ PS ++Y CI++ G V A + F+E+ K +S
Sbjct: 352 MAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLS 410
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
T N M++ C G A ++ + + G+ P+ T ++ KA
Sbjct: 411 TYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKA 457
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/364 (20%), Positives = 153/364 (42%), Gaps = 6/364 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L E LG+ + + +++ M I + +Y+ LI K G+ +++EM
Sbjct: 485 LIEGLGRHGRVDEAYKLYEQMLDANQ-IPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRL 543
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC PD L+ ++ KA + K FQ++K + P+ +Y IL+ +A
Sbjct: 544 GCSPDL----LLLNTYMDCVFKAGEIEKGRALFQEIKNLGFI-PDARSYTILIHGLVKAG 598
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ LF + E D YN V+D + K+G + + +L MK+ +P ++T+
Sbjct: 599 FAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYG 658
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+ID K D+ +F+ + + ++S+I +GK +A + +++
Sbjct: 659 SVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQK 718
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
TP+ T+ C++ + +S A F + L T + ++ C +A
Sbjct: 719 GLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKA 778
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
+ ++ G P+ TY + KA L ++ ++ G V + + +E
Sbjct: 779 FVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEG 838
Query: 475 FSSS 478
S++
Sbjct: 839 LSNA 842
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 166/384 (43%), Gaps = 15/384 (3%)
Query: 107 VRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMW 166
V S +C L LG+ + + L+ F M+K I + Y+ +I ++ K G+ A+
Sbjct: 375 VVSYNCIL--SCLGRKGQVDEALKKFEEMKKDA--IPNLSTYNIMIDMLCKAGKLETALV 430
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
+ M+++G P+ N ++ KA+ L A F+ + + C+P+ VTY L
Sbjct: 431 VRDAMKDAGLFPNVITVNIMVDRLC----KAQRLDDACSIFEGLD-HKTCRPDAVTYCSL 485
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+ + VD+ L++++ ++ P+ Y ++ + K G ++ + + M C
Sbjct: 486 IEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGC 545
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
PD++ N +D K +K +F+ + + P ++ +I KA +A
Sbjct: 546 SPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYE 605
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+F M Y +I + V++A ++ +E+ G + V T ++++
Sbjct: 606 LFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLA 665
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK- 465
EA +LFE + + G+ + Y L + K + +++ + Q G+ PN
Sbjct: 666 KIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVY 725
Query: 466 --RFFLEAL---ETFSSSLAGSQS 484
L+AL E S +L QS
Sbjct: 726 TWNCLLDALVKAEEISEALVCFQS 749
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 96/254 (37%), Gaps = 61/254 (24%)
Query: 94 EPLVRT----LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYS 149
EP V T ++ K+ R + ++LFEE K + + IYS
Sbjct: 651 EPTVVTYGSVIDGLAKIDRLDEAYMLFEE-----------------AKSKGIELNVVIYS 693
Query: 150 KLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQK 209
LI GK G+ A + E+ G P+ +N L+ A + KA+ +++AL FQ
Sbjct: 694 SLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALV----KAEEISEALVCFQS 749
Query: 210 MKGMERC-----------------------------------KPNIVTYNILLRACAQAR 234
MK + +C KPN+ TY ++ A+A
Sbjct: 750 MKDL-KCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAG 808
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
N+ + + LF++ E D YN +++ + + + C T
Sbjct: 809 NIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCV 868
Query: 295 LLIDSYGKRQAFDK 308
+L+DS K + ++
Sbjct: 869 VLLDSLHKAECIEQ 882
>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
Length = 472
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 147/320 (45%), Gaps = 8/320 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL-HTRDKAKALAKALGY 206
Y+ L+ + + LA+ F ++ +G R D A+I +HL +AK +AL
Sbjct: 80 YAILMDCCTRAHRPELALAFFGQLLRTGLRVD-----AIIASHLLKGFCEAKRTDEALDI 134
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE--SILAPDIYTYNGVMDA 264
C P++ +YNILL++ Q + L + + E ++ +PD+ YN V+D
Sbjct: 135 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDG 194
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ K G + + + M PD++T+N ++ + K +A DK E + +++ + P
Sbjct: 195 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 254
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
T+N++I Y +A VF++M P +T ++ + AR++FD
Sbjct: 255 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 314
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
++ G++ V + N ML Y G + LF+ G+ PD T+ + KAY
Sbjct: 315 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCG 374
Query: 445 MKELVQKLLKRMEQNGIVPN 464
M + + M +G+ P+
Sbjct: 375 MLDKAMIIFNEMRDHGVKPD 394
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 147/341 (43%), Gaps = 14/341 (4%)
Query: 104 VKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRL 163
V + + H F E ++D + L++ + + D Y+ L+ + +G++
Sbjct: 110 VDAIIASHLLKGFCEAKRTD---EALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQ 166
Query: 164 AMWLFSEMRNSG--CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPN 219
A L M G C PD YN +I D + KA F++M +G+ P+
Sbjct: 167 ADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGD----VNKACDLFKEMVQRGIP---PD 219
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+VTYN ++ A +AR +D+ A +++ + P+ +TYN ++ Y G KE V
Sbjct: 220 LVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFK 279
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
M+ + PD++T ++L+ S K + VF ++ + P + ++N M+ Y
Sbjct: 280 EMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKG 339
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLN 399
+F M P F T+ I Y C + +A IF+E+ G V T
Sbjct: 340 CLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYR 399
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
++ A C G +A F + GV PD Y L + +
Sbjct: 400 TVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGF 440
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 129/298 (43%), Gaps = 6/298 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIA-DTGIYSKLIAVMGKKGQTRLAMWLFSEMR 172
+L + L K Q + R M + + D Y+ +I K+G A LF EM
Sbjct: 153 ILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMV 212
Query: 173 NSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
G PD YN+++ H KA+A+ KA + ++M +R PN TYN L+ +
Sbjct: 213 QRGIPPDLVTYNSVV----HALCKARAMDKAEAFLRQMVN-KRVLPNNWTYNNLIYGYSS 267
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+ +FKE+ + PD+ T + +M + K G IKE V M PD+ +
Sbjct: 268 TGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 327
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N++++ Y + M +F ++ P TFN I Y + KA +F +M
Sbjct: 328 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMR 387
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
P +TY +I + A E F+++ G N +++ +C +G+
Sbjct: 388 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGI 445
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 143/309 (46%), Gaps = 15/309 (4%)
Query: 175 GCRPDPSVYNALITAHLHTRDKAKA--LAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
GC PD YN L+ + + +A L + + +G C P++V YN ++ +
Sbjct: 143 GCVPDVFSYNILLKSLCNQGKSGQADNLLRMMA-----EGGTVCSPDVVAYNTVIDGFFK 197
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+V++ LFKE+ + + PD+ TYN V+ A K + + E+ L +M + + P+ T
Sbjct: 198 EGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWT 257
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM---IINYGKARLQGKAEYVFQ 349
+N LI Y + + +VFK + P + T + + + YGK + +A VF
Sbjct: 258 YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIK---EARDVFD 314
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
M P +Y ++ Y + ++FD + G T N ++AY G
Sbjct: 315 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCG 374
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK-ANMKELVQKLLKRMEQNGIVPNKRFF 468
+ +A ++F + GV PD TY+ + A + M + ++K + ++Q G+ P+K +
Sbjct: 375 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ-GVAPDKYAY 433
Query: 469 LEALETFSS 477
++ F +
Sbjct: 434 NCLIQGFCT 442
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 80/187 (42%), Gaps = 33/187 (17%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
+ +W + + VF+ M++ + D S L+ + K G+ + A +F M G PD
Sbjct: 268 TGQWKEAVRVFKEMRRHS-ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 326
Query: 182 VYNALITAH---------------------------LHTRDKAKA----LAKALGYFQKM 210
YN ++ + + + KA A L KA+ F +M
Sbjct: 327 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEM 386
Query: 211 KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
+ KP++VTY ++ A + +D F ++ + +APD Y YN ++ + +G+
Sbjct: 387 RD-HGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGI 445
Query: 271 IKEMESV 277
+ + + +
Sbjct: 446 LLKTQGI 452
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 159/354 (44%), Gaps = 11/354 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ + L KS K + + +F+ M + Y D Y LI +GK+ + + A LF E R
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIY-PDVVTYGALIDGLGKQRRVKEAYDLFEEARAK 59
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC P YN +I K + AL + M +P +VTY+ L+ +
Sbjct: 60 GCHPTVVTYNTMIDGLC----KCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDH 115
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
VD+ L +E+ AP+ TYN +++A G KE S+L +M +N C P++ITF
Sbjct: 116 EVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFG 175
Query: 295 LLIDSYGK----RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
L+I K AF ++++F ++ S P + TFNS++ K + A VF++
Sbjct: 176 LIIKGLCKEGEIEAAFRVVDEMF--MIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKR 233
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
P+ +TY +I + A ++ ++ +LG T + +++ G
Sbjct: 234 ALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGR 293
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+A ++ + G PD+ TY L + K LL+ M + G P+
Sbjct: 294 MEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPS 347
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 147/324 (45%), Gaps = 16/324 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEM--RNSGCRPDPSVYNALITAHLHTRDKAKALAKALG 205
+ +I + K+G+ A + EM SG PD +N+++ K + + A
Sbjct: 174 FGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLC----KEQRILDAHN 229
Query: 206 YFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
F++ +ER C+PN+VTY+ L+ ++ +D+ L ++ E + TY+ V+D
Sbjct: 230 VFKR--ALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDG 287
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
K G +++ VL +M+ C PD +T+N LID + KRQ + + + ++ + P+
Sbjct: 288 LLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPS 347
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ T+ ++ ++ +A + M A P+ ITY I+ G C R E
Sbjct: 348 VVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVD--GLC-KAGRVTEALG 404
Query: 385 ELSKLGKDMKVS----TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
K+ +D V+ +A+++ C G EA E G PD T+ +L
Sbjct: 405 YFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGL 464
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
A + +L + M + G VP+
Sbjct: 465 CDAGRIDTGLELFRGMAERGCVPD 488
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 148/341 (43%), Gaps = 11/341 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ + L K + L VF+ +R + YS LI + K + A+ L ++M
Sbjct: 214 VLDGLCKEQRILDAHNVFKR-ALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVEL 272
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GCR + Y+ ++ L K + A+ ++M+ C P+ VTYN L+ + +
Sbjct: 273 GCRANTVTYSTVVDGLL----KVGRMEDAVVVLRQMRDAG-CLPDAVTYNTLIDGFFKRQ 327
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ + L +E+ E+ P + TY + ++G E +L M + C P+ IT++
Sbjct: 328 RLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYS 387
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKE-KPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
++D K + F+ + + P + ++++I KA +A ++M
Sbjct: 388 SIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIR 447
Query: 354 MKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P +T+ +I G CD + E+F +++ G + T +++ C
Sbjct: 448 AGRIPDVVTFSILIN--GLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRV 505
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
EA LF+ + G++PD ST + + + N E +++
Sbjct: 506 DEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRI 546
>gi|410110087|gb|AFV61123.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
urticoides]
Length = 423
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 138/283 (48%), Gaps = 7/283 (2%)
Query: 134 WMQK--QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
W+QK Q D +YS LI + K A+ +FS +++SG PD YNA+I
Sbjct: 21 WLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGFTPDLVAYNAMINVF- 79
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KAK +A +MK PN +Y+ LL + + + ++F E+ E
Sbjct: 80 ---GKAKLFREARSLISEMK-TAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKC 135
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
D+ T N ++D YG+ GM KE + + M+ +P+++++N L+ YG + F +
Sbjct: 136 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 195
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+F+ + + + T+NSMI+ YGK KA + Q+M + P+ ITY II+++G
Sbjct: 196 LFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWG 255
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ RA +F +L G ++ M+ AY GL A
Sbjct: 256 KVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHA 298
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 150/316 (47%), Gaps = 5/316 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS LI GK+G A+ +M D +Y+ LI D +KA++ F
Sbjct: 2 YSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAIS----IF 57
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++K P++V YN ++ +A+ + +L E+ + + P+ +Y+ ++ Y +
Sbjct: 58 SRLKS-SGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVE 116
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
N E SV S M+ +C D+ T N++ID YG+ + +++F + +P + +
Sbjct: 117 NKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 176
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N+++ YG A L G+A ++F+ M + +TY +I +YG +A + E+
Sbjct: 177 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQ 236
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G + T + ++ + G A +LF+ + GV D ++ + AY +A +
Sbjct: 237 SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVA 296
Query: 448 LVQKLLKRMEQNGIVP 463
++LL +++ +P
Sbjct: 297 HAKRLLHELKRPDNIP 312
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 150/343 (43%), Gaps = 15/343 (4%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K + D Y+ +I V GK R A L SEM+ +G P+ + Y+ L+T ++
Sbjct: 61 KSSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVEN--- 117
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
K +AL F +M+ + +C ++ T NI++ Q + + LF + + + P++
Sbjct: 118 -KKFLEALSVFSEMREI-KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVV 175
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+YN ++ YG + E + M+ + +++T+N +I YGK +K + + +
Sbjct: 176 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEM 235
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P T++++I +GK +A +FQK+ + I ++ +I Y V
Sbjct: 236 QSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLV 295
Query: 377 SRAREIFDELSK---LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ A+ + EL + + +D + L G EA +F + + G D + +
Sbjct: 296 AHAKRLLHELKRPDNIPRDTAIHILAGA-------GRIEEATYVFRQAIDAGEVKDITVF 348
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+ + +K V ++ +M G P+ L +
Sbjct: 349 ERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLNAYG 391
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%)
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TY+ ++ +GK G+ S L +M+ +Q D++ ++ LI+ K + K +F L
Sbjct: 1 TYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 60
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
S P L +N+MI +GKA+L +A + +M P+ +Y ++TMY
Sbjct: 61 KSSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKF 120
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
A +F E+ ++ + ++T N M++ Y G+ EAD LF MG+ P+ +Y L
Sbjct: 121 LEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTL 180
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ Y A + L + M++ I N
Sbjct: 181 LRVYGDAELFGEAIHLFRLMQRKNIEQN 208
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 127/298 (42%), Gaps = 37/298 (12%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
K+L+ L VF M++ + + D + +I V G+ G + A LF MR G P+ Y
Sbjct: 119 KFLEALSVFSEMREIKCLL-DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSY 177
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
N L L A+ +A+ F+ M+ + + N+VTYN ++ + ++ N L
Sbjct: 178 NTL----LRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVTYNSMIMIYGKTLEHEKANNLI 232
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY--- 300
+E+ + P+ TY+ ++ +GK G + + +++S+ + D I F +I +Y
Sbjct: 233 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERA 292
Query: 301 -----GKRQAFD--------------------KMEQ---VFKSLMHSKEKPTLPTFNSMI 332
KR + ++E+ VF+ + + E + F MI
Sbjct: 293 GLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMI 352
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
K + VF KM + Y P ++ YG +A +++ E+ ++G
Sbjct: 353 HLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQEVG 410
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 109/243 (44%)
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
TY+ L+ + D + +++ + + D+ Y+ +++ K + S+ SR+
Sbjct: 1 TYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 60
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
KS+ PD++ +N +I+ +GK + F + + + + P ++++++ Y + +
Sbjct: 61 KSSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKF 120
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
+A VF +M +K T +I +YG A ++F + K+G + V + N +
Sbjct: 121 LEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTL 180
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
L Y L EA LF + + TY + Y K E L++ M+ GI
Sbjct: 181 LRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGI 240
Query: 462 VPN 464
PN
Sbjct: 241 EPN 243
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 156/339 (46%), Gaps = 15/339 (4%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT---RDKAKALAKA 203
IY+ +I + K A+ +F M G D YN LI+ ++ D A+ L
Sbjct: 722 IYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDM 781
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ + PN++ + L+ + N+ + L+KE+ + P+I TYN +++
Sbjct: 782 V--------KRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLIN 833
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ G + + + + M S C PD++T+N LI + K + + ++F + H
Sbjct: 834 GFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVG 893
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRARE 381
T+N++I Y +A A+ VF +M P +TY I + C+N + +A
Sbjct: 894 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYN--ILLDCLCNNGKIEKALV 951
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ ++L K D+ + T N +++ C N EA LF + GV D+ Y +
Sbjct: 952 MVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLC 1011
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLA 480
+ ++ KL RM+++G +P++R + E L +SL+
Sbjct: 1012 RNGLRREADKLCTRMKEDGFMPSERIYDETLRDHYTSLS 1050
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 158/328 (48%), Gaps = 16/328 (4%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG-CRPDPSVYNALITAHLHTRDKAKA 199
Y + +Y+ LI + K G +A+ L +EM G D YN L+T ++ + +A
Sbjct: 166 YEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQA 225
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
A+ L K R P++ T+ L+ A + N+D+ L+K++ +S + P+ TYN
Sbjct: 226 -ARILRDMTK----RRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYN 280
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
+++ +G + + M S C P+++T+N LI+ + K + + ++F+ +
Sbjct: 281 SLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYRE 340
Query: 320 KEKPTLPTFNSMIINY---GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN- 375
T+N++I Y GK R+ A+ +F M + TP IT+ CI+ ++G C N
Sbjct: 341 GLVGDTFTYNTLIHGYCQVGKLRV---AKDIFSWMVSCGVTPDIITH-CIL-LHGLCVNG 395
Query: 376 -VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
+ A F+++ K + + N M+ C EA LF GV PD+ TY
Sbjct: 396 EIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYT 455
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIV 462
++ K + +L +RM+++GI+
Sbjct: 456 IMILGLCKNGPRREADELFRRMKEDGII 483
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 147/346 (42%), Gaps = 38/346 (10%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKAL--- 204
+++++ + K + + ++LF +M N G D +Y+ I H R +LA AL
Sbjct: 618 FTRVLTAIAKMNKFDIVIYLFHKMENLGISHD--LYSFTILIHCFCRCSRFSLALALLGK 675
Query: 205 ------------------GYFQKMKGMERC-----------KPNIVTYNILLRACAQARN 235
G+ Q + E +PN+V YN ++ + R+
Sbjct: 676 MMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRD 735
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
++ +F + + + D TYN ++ +G + +L M + P++I F
Sbjct: 736 LNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTA 795
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
LID++ K + + ++K ++ P + T+NS+I + G A+++F M +
Sbjct: 796 LIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKG 855
Query: 356 YTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P +TY +IT G+C + V ++F E++ G T N ++ YC G
Sbjct: 856 CFPDVVTYNTLIT--GFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNV 913
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
A +F + GV PD TY +L E +++ +++N
Sbjct: 914 AQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKN 959
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 120/279 (43%), Gaps = 12/279 (4%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L S +W Q + R M K+R D ++ LI K+G A L+ +M S
Sbjct: 212 LLTGLCYSGEWRQAARILRDMTKRRIN-PDVFTFTALIDAFVKQGNLDEAQELYKQMLQS 270
Query: 175 GCRPDPSVYNALITA-HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
P+ YN+LI +H R L A F M + C PN+VTYN L+ ++
Sbjct: 271 SIGPNTVTYNSLINGLCMHGR-----LYHAKKTFDLMAS-KGCFPNVVTYNTLINGFCKS 324
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
R V+ LF+ ++ L D +TYN ++ Y + G ++ + + S M S PDIIT
Sbjct: 325 RRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITH 384
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+L+ F + ++ + +N MI KA +A +F ++
Sbjct: 385 CILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPV 444
Query: 354 MKYTPSFITYECIITMYGYCDNVSR--AREIFDELSKLG 390
P TY I + G C N R A E+F + + G
Sbjct: 445 EGVKPDARTYT--IMILGLCKNGPRREADELFRRMKEDG 481
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 135/318 (42%), Gaps = 6/318 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+++L+ + + ++ +M G D + LI H + L+ AL
Sbjct: 68 FTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILI----HCFCRCSRLSLALSIL 123
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
KM + P+IVT+ LL + +L + +S P++ YN ++D K
Sbjct: 124 GKMMKLGY-DPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCK 182
Query: 268 NGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
NG + +L+ M K + D++T+N L+ + + ++ + + + P +
Sbjct: 183 NGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVF 242
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
TF ++I + K +A+ ++++M P+ +TY +I + A++ FD +
Sbjct: 243 TFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLM 302
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
+ G V T N ++ +C + + LF+ + G+ D+ TY L Y +
Sbjct: 303 ASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKL 362
Query: 447 ELVQKLLKRMEQNGIVPN 464
+ + + M G+ P+
Sbjct: 363 RVAKDIFSWMVSCGVTPD 380
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 119/302 (39%), Gaps = 13/302 (4%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
LE+ M+K+ AD Y+ L+ + G+ R A + +M PD + ALI
Sbjct: 190 LELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALID 249
Query: 189 AHLH--TRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
A + D+A+ L K + Q G PN VTYN L+ + F +
Sbjct: 250 AFVKQGNLDEAQELYKQM--LQSSIG-----PNTVTYNSLINGLCMHGRLYHAKKTFDLM 302
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
P++ TYN +++ + K+ +++ + RM D T+N LI Y +
Sbjct: 303 ASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKL 362
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ +F ++ P + T ++ G A F M + + + Y
Sbjct: 363 RVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYN-- 420
Query: 367 ITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
I ++G C D V A E+F L G T M+ C NG EAD LF
Sbjct: 421 IMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKED 480
Query: 425 GV 426
G+
Sbjct: 481 GI 482
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 115/283 (40%), Gaps = 36/283 (12%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P++V + LL A A R + V +++ ++ D+Y++ ++ + + + S+
Sbjct: 63 PSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSI 122
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI----- 332
L +M P I+TF L+ + R + S++ S +P + +N++I
Sbjct: 123 LGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCK 182
Query: 333 ---INYG---------KARLQG-------------------KAEYVFQKMTAMKYTPSFI 361
+N K RL +A + + MT + P
Sbjct: 183 NGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVF 242
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
T+ +I + N+ A+E++ ++ + T N+++ CM+G A F+
Sbjct: 243 TFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLM 302
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ G P+ TY L + K+ E KL +RM + G+V +
Sbjct: 303 ASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGD 345
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 99/241 (41%), Gaps = 6/241 (2%)
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
LR+ D LF E+ +S P I + V+ A K + + +M++
Sbjct: 587 LRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGI 646
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
D+ +F +LI + + F + +M +P++ T S++ + + +A
Sbjct: 647 SHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVS 706
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEA 404
+ M + P+ + Y +I G C N ++ A EIF + K G T N ++
Sbjct: 707 LVDSMAELGLEPNVVIYNTVIN--GLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISG 764
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK-ANMKELVQKLLKRMEQNGIVP 463
C +G T+A L + + P+ + L + K N+ E + L K M + + P
Sbjct: 765 LCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE-AKNLYKEMIRRSVHP 823
Query: 464 N 464
N
Sbjct: 824 N 824
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 77/188 (40%)
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P I+ F ++ + K FD + +F + + L +F +I + + A +
Sbjct: 613 PSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALAL 672
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
KM + + PS +T ++ + + A + D +++LG + V N ++ C
Sbjct: 673 LGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCK 732
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
N A +F G+ D+ TY L + +LL+ M + I PN F
Sbjct: 733 NRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIF 792
Query: 468 FLEALETF 475
F ++TF
Sbjct: 793 FTALIDTF 800
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 62/155 (40%)
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
F+ +F ++ S+ P++ F ++ R Y Q+M + ++
Sbjct: 46 FEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTI 105
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+I + C +S A I ++ KLG D + T ++L +C+ +A L + G
Sbjct: 106 LIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSG 165
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
P+ Y L K + +LL ME+ G
Sbjct: 166 YEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKG 200
>gi|255539196|ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551364|gb|EEF52850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 184/403 (45%), Gaps = 16/403 (3%)
Query: 69 KRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVK-------VVRSEHCFLLFEELGK 121
+ G S+ + +++ L+RS P+++ L ++ V S + F + G
Sbjct: 212 QDGYPSDFVNYSLIIQSLVRSNRIDSPILQKLYSEIQCDKLELDVQLSNDIIVGFAKAGD 271
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
+K ++ F M + T +I+ +G G+ A +F EM+++G +P
Sbjct: 272 PNKAME----FLGMVQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTR 327
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
YN L+ ++ KA L A +M+ P+ TY++L+ A + A +
Sbjct: 328 AYNGLLKGYV----KAGMLKDAEFIVSEME-RSGVSPDECTYSLLIDAYSNAGRWESARI 382
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
+ KE+ + + P+ Y ++ ++ +Y G ++ VL MK++ +PD +N++ID++G
Sbjct: 383 VLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFG 442
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
K D F ++ +P T+N++I + KA L +AE +F++M ++P
Sbjct: 443 KFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVT 502
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
T+ +I +G + + + + LG V T +++ Y +G ++A E+
Sbjct: 503 TFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDM 562
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ G+ P S+ Y L AY + + E + M + + P+
Sbjct: 563 KSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRADSLKPS 605
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 155/357 (43%), Gaps = 6/357 (1%)
Query: 108 RSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWL 167
R+ + LG S + ++ +F M K T Y+ L+ K G + A ++
Sbjct: 290 RTATLIAVISALGDSGRIIEAEAIFEEM-KDNGLKPKTRAYNGLLKGYVKAGMLKDAEFI 348
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
SEM SG PD Y+ LI A+ A A ++M+ PN ++ +L
Sbjct: 349 VSEMERSGVSPDECTYSLLIDAY----SNAGRWESARIVLKEMEA-NNIMPNSYVFSRIL 403
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
+ + + KE+ S + PD + YN ++D +GK + +M S +
Sbjct: 404 ASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQ 463
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
PD +T+N LID + K + ++ E++F+ +M P + TFN MI ++G+ + +
Sbjct: 464 PDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTL 523
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
M ++ P+ +TY +I +YG S A E +++ G + NA++ AY
Sbjct: 524 MGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQ 583
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
GL +A F + P L A+ + +LK M++N + P+
Sbjct: 584 KGLSEQAVNAFRLMRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPD 640
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 158/333 (47%), Gaps = 20/333 (6%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
LL + + +W V + M+ + ++ ++S+++A +G+ + + + EM+N
Sbjct: 366 LLIDAYSNAGRWESARIVLKEMEANN-IMPNSYVFSRILASYRDRGEWQKSFQVLKEMKN 424
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
SG RPD YN +I T K L A+ F KM E +P+ VT+N L+ +A
Sbjct: 425 SGVRPDRHFYNVMI----DTFGKFSCLDHAMDTFDKMLS-EGIQPDTVTWNTLIDCHCKA 479
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
++ LF+E+ E +P + T+N +++++G+ ++++++ M+S P+++T+
Sbjct: 480 ELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTY 539
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
LID YGK F + + + + KP+ +N++I Y + L +A F+ M A
Sbjct: 540 TTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRA 599
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGK-DMK------VSTLNAMLEAYC 406
PS + +I +G R E F L + + D+K + + A++
Sbjct: 600 DSLKPSLLALNSLINAFG---EDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRVDK 656
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
N +P+ ++E G TPD +L A
Sbjct: 657 FNKVPS----VYEEMILAGCTPDRKARAMLRSA 685
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 153/344 (44%), Gaps = 5/344 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D + + +I K G AM ++ SG P + A+I+A D + + +A
Sbjct: 255 DVQLSNDIIVGFAKAGDPNKAMEFLGMVQASGLSPRTATLIAVISA---LGDSGRII-EA 310
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F++MK KP YN LL+ +A + + E+ S ++PD TY+ ++D
Sbjct: 311 EAIFEEMKD-NGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLID 369
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
AY G + VL M++N P+ F+ ++ SY R + K QV K + +S +P
Sbjct: 370 AYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRP 429
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+N MI +GK A F KM + P +T+ +I + + RA E+F
Sbjct: 430 DRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELF 489
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+E+ + G V+T N M+ ++ + L N ++G+ P+ TY L Y K+
Sbjct: 490 EEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKS 549
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSA 487
+ L+ M+ G+ P+ + + ++ Q+ +A
Sbjct: 550 GRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNA 593
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 121/255 (47%), Gaps = 7/255 (2%)
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y+IL+ A ++ + + F + L+P TYN +++A +N +++ +++SRM+
Sbjct: 157 YSILIHALGRSEKLYEA---FLLSQQQALSP--LTYNALINACARNNDLEKAINLISRMR 211
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDK--MEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
+ D + ++L+I S + D +++++ + K + + N +I+ + KA
Sbjct: 212 QDGYPSDFVNYSLIIQSLVRSNRIDSPILQKLYSEIQCDKLELDVQLSNDIIVGFAKAGD 271
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
KA + A +P T +I+ G + A IF+E+ G K N
Sbjct: 272 PNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNG 331
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+L+ Y G+ +A+ + GV+PD TY LL AY+ A E + +LK ME N
Sbjct: 332 LLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANN 391
Query: 461 IVPNKRFFLEALETF 475
I+PN F L ++
Sbjct: 392 IMPNSYVFSRILASY 406
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 147/370 (39%), Gaps = 47/370 (12%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
V W+QK + +YS LI +G+ + A L + S P YNALI A
Sbjct: 140 VVSWLQKHNLCFSYELLYSILIHALGRSEKLYEAFLLSQQQALS-----PLTYNALINAC 194
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ--VNALFKELHE 248
D L KA+ +M+ + + V Y++++++ ++ +D + L+ E+
Sbjct: 195 ARNND----LEKAINLISRMR-QDGYPSDFVNYSLIIQSLVRSNRIDSPILQKLYSEIQC 249
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
L D+ N ++ + K G + L ++++ P T +I + G +
Sbjct: 250 DKLELDVQLSNDIIVGFAKAGDPNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRIIE 309
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
E +F+ + + KP +N ++ Y KA + AE++ +M +P TY +I
Sbjct: 310 AEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLID 369
Query: 369 MYGYCDNVSRAREIFDELS----------------------------KLGKDMKVSTL-- 398
Y AR + E+ ++ K+MK S +
Sbjct: 370 AYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRP 429
Query: 399 -----NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
N M++ + A F+ + G+ PD+ T+ L + KA + E ++L
Sbjct: 430 DRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELF 489
Query: 454 KRMEQNGIVP 463
+ M + G P
Sbjct: 490 EEMMEKGFSP 499
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 161/349 (46%), Gaps = 16/349 (4%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
KS + +E+ R M++++ + D YS +I + K G A LF+EM G + D
Sbjct: 224 KSGQTALAMELLRKMEERKIKL-DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 282
Query: 181 SVYNALITAHLHT---RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
+Y LI + D AK L + + P++V ++ L+ + +
Sbjct: 283 IIYTTLIRGFCYAGRWDDGAKLLRDMI--------KRKITPDVVAFSALIDCFVKEGKLR 334
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ L KE+ + ++PD TY ++D + K + + +L M S C P+I TFN+LI
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+ Y K D ++F+ + T+N++I + + A+ +FQ+M + +
Sbjct: 395 NGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVR 454
Query: 358 PSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
P ++Y+ I + G CDN +A EIF+++ K ++ + N ++ C +A
Sbjct: 455 PDIVSYK--ILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
LF + GV PD TY ++ K L ++ME++G PN
Sbjct: 513 DLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPN 561
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 142/341 (41%), Gaps = 49/341 (14%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W ++ R M K R D +S LI K+G+ R A L EM G PD Y
Sbjct: 297 RWDDGAKLLRDMIK-RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355
Query: 184 NALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNA 241
+LI K L KA M KG C PNI T+NIL+ +A +D
Sbjct: 356 TSLIDGFC----KENQLDKANHMLDLMVSKG---CGPNIRTFNILINGYCKANLIDDGLE 408
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
LF+++ + D TYN ++ + + G ++ + + M S + +PDI+++ +L+D
Sbjct: 409 LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
+K ++F+ + SK + + +N
Sbjct: 469 DNGEPEKALEIFEKIEKSKMELDIGIYN-------------------------------- 496
Query: 362 TYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
I ++G C+ V A ++F L G V T N M+ C G +EADLLF
Sbjct: 497 -----IIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFR 551
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
G +P+ TY +L +A+ KL++ +++ G
Sbjct: 552 KMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 146/331 (44%), Gaps = 19/331 (5%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
Y DT +S LI + +G+ A+ L M G +P NAL+ L K +
Sbjct: 138 YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNG-LCLNGK---V 193
Query: 201 AKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
+ A+ +M G + PN VTY +L+ ++ L +++ E + D Y
Sbjct: 194 SDAVLLIDRMVETGFQ---PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKY 250
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
+ ++D K+G + ++ + M+ K DII + LI + +D ++ + ++
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310
Query: 319 SKEKPTLPTFNSMI---INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC-- 373
K P + F+++I + GK R +AE + ++M +P +TY +I G+C
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLR---EAEELHKEMIQRGISPDTVTYTSLID--GFCKE 365
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ + +A + D + G + T N ++ YC L + LF GV D+ TY
Sbjct: 366 NQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY 425
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L + + + E+ ++L + M + P+
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEMVSRRVRPD 456
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 6/195 (3%)
Query: 271 IKEMESV--LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
IKE ++V M ++ +P +I F+ L + + +D + + K + L T
Sbjct: 51 IKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTL 110
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDEL 386
+ MI + R A K+ + Y P +T+ +I G C VS A E+ D +
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLIN--GLCLEGRVSEALELVDRM 168
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
++G + TLNA++ C+NG ++A LL + G P+ TY + K K+
Sbjct: 169 VEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQT 228
Query: 447 ELVQKLLKRMEQNGI 461
L +LL++ME+ I
Sbjct: 229 ALAMELLRKMEERKI 243
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 125/314 (39%), Gaps = 9/314 (2%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ LF EM S RP P + + + R K L L ++KG+ N+ T
Sbjct: 56 AVDLFQEMTRS--RPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAH---NLYTL 110
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
+I++ C + R + + ++ + PD T++ +++ G + E ++ RM
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
KP +IT N L++ + ++ + +P T+ ++ K+
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAM 401
A + +KM K + Y II G C + + A +F+E+ G + +
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIID--GLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ +C G + L + +TPD + L + K ++L K M Q GI
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Query: 462 VPNKRFFLEALETF 475
P+ + ++ F
Sbjct: 349 SPDTVTYTSLIDGF 362
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 6/166 (3%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L + + + LE+F ++K + + D GIY+ +I M + A LF +
Sbjct: 462 ILLDGLCDNGEPEKALEIFEKIEKSKMEL-DIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G +PD YN +I K +L++A F+KM+ + PN TYNIL+RA
Sbjct: 521 KGVKPDVKTYNIMIGGLC----KKGSLSEADLLFRKME-EDGHSPNGCTYNILIRAHLGE 575
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+ + L +E+ + D T V+D + K +LS
Sbjct: 576 GDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFLDMLS 621
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 154/356 (43%), Gaps = 39/356 (10%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
I D + LI + G+TR A + + NSG PD YN LI + K+ +
Sbjct: 139 IPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYC----KSGEID 194
Query: 202 KALGYFQKM------------------------------KGMER-CKPNIVTYNILLRAC 230
KAL ++M + M+R C P+++TY IL+ A
Sbjct: 195 KALQVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEAT 254
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
V Q L E+ + PD+ TYN +++ K G + E L+ M C+P++
Sbjct: 255 CNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNV 314
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
IT N+++ S + E++ ++ P++ TFN +I + RL G+A V +K
Sbjct: 315 ITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEK 374
Query: 351 MTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
M P+ ++Y + ++G+C + RA E + + G + T N +L A C +
Sbjct: 375 MPKHGCMPNSLSYNPL--LHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKD 432
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G A + + G +P TY + TK E +LL+ M + G+ P+
Sbjct: 433 GKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPD 488
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 159/364 (43%), Gaps = 10/364 (2%)
Query: 115 LFEELGKSDKWLQCLEVF-RWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+ L S K + +EV R MQ++ + D Y+ LI AM L EMR
Sbjct: 215 ILRSLCDSGKLKEAMEVLDRQMQRECY--PDVITYTILIEATCNDSGVGQAMKLLDEMRK 272
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQ 232
GC+PD YN LI K L +A+ + M + C+PN++T+NI+LR+ C+
Sbjct: 273 KGCKPDVVTYNVLINGIC----KEGRLDEAIKFLNNMP-LYGCQPNVITHNIILRSMCST 327
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
R +D L ++ +P + T+N +++ + ++ VL +M + C P+ ++
Sbjct: 328 GRWMD-AERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLS 386
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N L+ + + + D+ + + ++ P + T+N+++ K A + +++
Sbjct: 387 YNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLS 446
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ +P ITY +I A E+ +E+ + G + T + +L G
Sbjct: 447 SKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVD 506
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
EA +F + + + P + TY + KA L M + G P K + +
Sbjct: 507 EAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILI 566
Query: 473 ETFS 476
E +
Sbjct: 567 EGIA 570
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 82/200 (41%), Gaps = 7/200 (3%)
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+NG ++E L RM PD+I LI + + K ++ + L +S P +
Sbjct: 119 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVI 178
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFD 384
T+N +I Y K+ G+ + Q + M P +TY I + CD+ + A E+ D
Sbjct: 179 TYNVLIGGYCKS---GEIDKALQVLERMSVAPDVVTYNTI--LRSLCDSGKLKEAMEVLD 233
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ V T ++EA C + +A L + G PD TY +L K
Sbjct: 234 RQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEG 293
Query: 445 MKELVQKLLKRMEQNGIVPN 464
+ K L M G PN
Sbjct: 294 RLDEAIKFLNNMPLYGCQPN 313
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 180/393 (45%), Gaps = 17/393 (4%)
Query: 85 VLMRSFSDKEPLVRTLNKYVKV----VRSEHCF--LLFEELGKSDKWLQCLEVFRWMQKQ 138
VL+ ++ + +V LN + + + ++H +L + GK + + +F MQ +
Sbjct: 372 VLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQ-E 430
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
R + D Y +IA + G+ AM F++M G +PD VYN+LI + K
Sbjct: 431 RGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVK 490
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
A K L +G+ R PN V +N ++ + + V + +F + PD+ T+
Sbjct: 491 A--KELISEMMSRGIPR--PNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITF 546
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N ++D YG G +++ VL M S +PD++T++ L+D Y + D +F+ ++
Sbjct: 547 NSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLS 606
Query: 319 SKEKPTLPTFNSMIIN-YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN-- 375
KPT T+ ++ + R G A+ + +M T T C I + G C N
Sbjct: 607 KGVKPTTITYGIILHGLFNDGRTVG-AKKMCHEMIESGTTMDIST--CGIILGGLCRNNC 663
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
A +F +L + ++ +N M++A EA+ LF++ G+ P++STY +
Sbjct: 664 DDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGV 723
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+ K E + ME++G P+ R
Sbjct: 724 MITNLLKEGSVEEADNMFSLMEKSGCAPSSRLL 756
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 146/355 (41%), Gaps = 45/355 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I ++G+ A LF EM G PD Y++ I A KA+A+ KA
Sbjct: 230 YNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALC----KARAMDKAELVL 285
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
++M G E P+ VTYN ++ + + +F+E+ L PDI+T N M +
Sbjct: 286 RQMISNGFE---PDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSL 342
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITF-------------------------------- 293
K+G KE M + KPD++T+
Sbjct: 343 CKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADH 402
Query: 294 ---NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
N+LID+YGKR D+ +F + P T+ ++I + + A F +
Sbjct: 403 SVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQ 462
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST-LNAMLEAYCMNG 409
M AM P I Y +I + N+ +A+E+ E+ G + N+++ + C G
Sbjct: 463 MIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEG 522
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA +F+ ++G PD T+ L Y E +L M GI P+
Sbjct: 523 RVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPD 577
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 133/309 (43%), Gaps = 3/309 (0%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
L M G PD Y+ ++ + +AL +K G C PN+V+YN +
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGG---CSPNVVSYNTV 233
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+ + V + LF E+ + + PD+ TY+ +DA K + + E VL +M SN
Sbjct: 234 IHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGF 293
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
+PD +T+N +I Y + + +F+ + P + T NS + + K +A
Sbjct: 294 EPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAE 353
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
F M A + P +TY ++ Y V +F+ + G S N +++AY
Sbjct: 354 FFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYG 413
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
G+ EA L+F GV PD+ TY + A+++ +M G+ P+
Sbjct: 414 KRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTI 473
Query: 467 FFLEALETF 475
+ ++ F
Sbjct: 474 VYNSLIQGF 482
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 155/350 (44%), Gaps = 10/350 (2%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
+ R + R + Y+ L+ + + + LF +G + D V N L+
Sbjct: 105 ICREEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCL 164
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHES 249
H + A+ L ++ G+E P+ ++Y+ +L++ C +R+ ++ L + +S
Sbjct: 165 CHAKRSDDAVNVLLHRMPEL-GVE---PDTISYSTVLKSLCEDSRSQRALDLLHTMVKKS 220
Query: 250 I-LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
+P++ +YN V+ + + G + + ++ M PD++T++ ID+ K +A DK
Sbjct: 221 GGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDK 280
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
E V + ++ + +P T+N MI Y + +F++MT P T C
Sbjct: 281 AELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFT--CNSY 338
Query: 369 MYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
M C + A E FD ++ G + T + +L Y G + LF + G+
Sbjct: 339 MSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGI 398
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
D S Y +L AY K M + + +M++ G++P+ + + FS
Sbjct: 399 VADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFS 448
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 158/385 (41%), Gaps = 48/385 (12%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L K K + E F M + + D YS L+ +G + LF+ M +G
Sbjct: 342 LCKHGKSKEAAEFFDSMA-AKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVA 400
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVD 237
D SVYN LI A+ K + +A+ F +M+ ER P+ TY ++ A ++ +
Sbjct: 401 DHSVYNILIDAY----GKRGMMDEAMLIFTQMQ--ERGVMPDAWTYGTVIAAFSRMGRLA 454
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC-KPDIITFNLL 296
F ++ L PD YN ++ + +G + + + ++S M S +P+ + FN +
Sbjct: 455 DAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSI 514
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
I+S K + + +F ++H E+P + TFNS+I YG KA V M ++
Sbjct: 515 INSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGI 574
Query: 357 TPSFITYECIITMYGYCDN-------------------------------------VSRA 379
P +TY ++ GYC N A
Sbjct: 575 EPDVVTYSALLD--GYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGA 632
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+++ E+ + G M +ST +L C N EA LF+ M V + + + A
Sbjct: 633 KKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDA 692
Query: 440 YTKANMKELVQKLLKRMEQNGIVPN 464
K +E +L + G+VPN
Sbjct: 693 MYKVRKREEANELFDSISATGLVPN 717
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 131/312 (41%), Gaps = 10/312 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
+T ++ +I + K+G+ A +F + + G RPD +N+LI + + KA
Sbjct: 507 NTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGY----GLVGKMEKA 562
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
G M G+E P++VTY+ LL + +D LF+E+ + P TY +
Sbjct: 563 FGVLDAMISVGIE---PDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGII 619
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ +G + + M + DI T +++ + D+ +FK L
Sbjct: 620 LHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNV 679
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
K + N+MI K R + +A +F ++A P+ TY +IT +V A
Sbjct: 680 KFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADN 739
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+F + K G LN ++ G ++A ++ ++ST L+ ++
Sbjct: 740 MFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFS 799
Query: 442 -KANMKELVQKL 452
K +E ++ L
Sbjct: 800 RKGKYREQIKSL 811
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 167/350 (47%), Gaps = 8/350 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+F ++G+S W + L V M+ + D S +++ ++G R A F+E+++
Sbjct: 261 VFGKMGRS--WRKILGVLEEMRSKGLKF-DEFTCSTVLSACAREGLLREAKDFFAELKSC 317
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P YNAL L KA +AL ++M+ C + VTYN L+ A A+A
Sbjct: 318 GYEPGTVTYNAL----LQVFGKAGVYTEALSVLKEMEE-NNCPADSVTYNELVAAYARAG 372
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ + + + + + P+ TY V+DAYGK G E + MK C P+ T+N
Sbjct: 373 FSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYN 432
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++ GK+ ++M ++ + + P T+N+++ G + VF++M +
Sbjct: 433 AVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSC 492
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ P T+ +I+ YG C + A +++ E+++ G + V+T NA+L A G
Sbjct: 493 GFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSG 552
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ + + + G P ++Y L+ + Y K ++++ + + + I P+
Sbjct: 553 ENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPS 602
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 161/404 (39%), Gaps = 75/404 (18%)
Query: 135 MQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR 194
M Q+ + + Y+ +I GK G+ A+ LF M+ +GC P+ YNA+++ L +
Sbjct: 383 MMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSM-LGKK 441
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
++ + K L MK C PN T+N +L C VN +F+E+ PD
Sbjct: 442 SRSNEMIKMLC---DMKS-NGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPD 497
Query: 255 IYTYNGVMDAYGKNG-------MIKEM----------------------------ESVLS 279
T+N ++ AYG+ G M EM E+V+S
Sbjct: 498 RDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVIS 557
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKME---------QVFKSLMHSKE--------- 321
MKS KP +++L++ Y K + +E Q+F S M +
Sbjct: 558 DMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCR 617
Query: 322 -----------------KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
KP + FNSM+ + + + +AE + Q + P +TY
Sbjct: 618 ALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYN 677
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
++ MY +A EI L K + + N +++ +C GL EA +
Sbjct: 678 SLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTER 737
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G+ P TY YT M ++ +++ M +N PN+ F
Sbjct: 738 GIRPCIFTYNTFVSGYTAMGMYGEIEDVIECMAKNDCRPNELTF 781
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 171/392 (43%), Gaps = 15/392 (3%)
Query: 85 VLMRSFSDKEPLVRTLNKYVKVVRSE----HCFLLFEELGKSDKWLQCLEVFRWMQKQRW 140
VL+ S + +PL R L+ + V+SE L + L S W + + +F W+
Sbjct: 117 VLVNSIVE-QPLPR-LSSFFDSVKSELLTTDLVSLVKGLDDSGHWERAVFLFEWLVLSSN 174
Query: 141 YIA---DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
A D + L+ ++G++ Q +A L ++ D Y T LH +
Sbjct: 175 SGALKLDHHVIEILVRILGRESQYSVAAKLLDKIPLQDYMLDVRAY----TTILHAYSRT 230
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ-ARNVDQVNALFKELHESILAPDIY 256
KA+ F++MK M P +VTYN++L + R+ ++ + +E+ L D +
Sbjct: 231 GKYEKAINLFERMKEMGP-SPTLVTYNVILDVFGKMGRSWRKILGVLEEMRSKGLKFDEF 289
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
T + V+ A + G+++E + + +KS +P +T+N L+ +GK + + V K +
Sbjct: 290 TCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEM 349
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+ T+N ++ Y +A +A V + MT P+ ITY +I YG
Sbjct: 350 EENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKE 409
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
A ++F + + G T NA+L E + + + G P+ +T+ +
Sbjct: 410 DEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTI 469
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
M + V ++ + M+ G P++ F
Sbjct: 470 LALCGNKGMDKFVNRVFREMKSCGFEPDRDTF 501
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 124/276 (44%), Gaps = 41/276 (14%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH----------------- 190
Y+ L+ + +KG R + S+M++ G +P + Y+ ++ +
Sbjct: 536 YNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGIN 595
Query: 191 --------------LHTRDKAKALA---KALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
L K +ALA +A F+K KP++V +N +L +
Sbjct: 596 EGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKK----HGYKPDMVIFNSMLSIFTRN 651
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
DQ + + +HE L PD+ TYN +MD Y + G + E +L ++ +Q KPD++++
Sbjct: 652 NMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSY 711
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N +I + ++ + ++ + +P + T+N+ + Y + G+ E V + M
Sbjct: 712 NTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMYGEIEDVIECMAK 771
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
P+ +T++ ++ GYC + E D +SK+
Sbjct: 772 NDCRPNELTFKMVVD--GYC-RAGKYSEAMDFVSKI 804
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 135/334 (40%), Gaps = 44/334 (13%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ ++A+ G KG + +F EM++ G PD +N LI+A+ + A +K G
Sbjct: 466 WNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDA-SKMYGEM 524
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ G C + TYN LL A A+ + + ++ P +Y+ ++ Y K
Sbjct: 525 TR-AGFNAC---VTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAK 580
Query: 268 NGMIKEMESVLSRMKSNQC-----------------------------------KPDIIT 292
G +E + + Q KPD++
Sbjct: 581 GGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVI 640
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
FN ++ + + +D+ E + +S+ P L T+NS++ Y + KAE + + +
Sbjct: 641 FNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLE 700
Query: 353 AMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
+ P ++Y +I G+C + A + E+++ G + T N + Y G+
Sbjct: 701 KSQLKPDLVSYNTVIK--GFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGM 758
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E + + E P+ T+K++ Y +A
Sbjct: 759 YGEIEDVIECMAKNDCRPNELTFKMVVDGYCRAG 792
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 156/356 (43%), Gaps = 19/356 (5%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQ---RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSE 170
+L +L + + VF MQ + R ++ ++ +I+ M + G A L
Sbjct: 245 VLMRDLVRLGELASAQNVFDEMQSRGVRRTVVS----FNTMISGMCRAGDLDGAETLHRR 300
Query: 171 MRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLR 228
M +G PD Y ALI + + A G F+KM +GM KPN V + IL+
Sbjct: 301 MSEAGVTPDVYTYGALIQGLC----RVGRIEDARGVFEKMCGRGM---KPNAVVFTILID 353
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
A + + + + L +E+ E + PD TYN +++ + +K ++ M+S +P
Sbjct: 354 AHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRP 413
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
D +T+ LID Y K + D ++ ++++ T+ ++I KA AE V
Sbjct: 414 DTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVL 473
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
+M P TY +I + +V + E+ G+ V T N ++ +C
Sbjct: 474 GEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKL 533
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G AD+L N+GV+PD TY +L + K +++L G VP+
Sbjct: 534 GQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEEL---KSAKGTVPD 586
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 144/307 (46%), Gaps = 17/307 (5%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK--ALAKALGYFQKM--KGMERCKPN 219
A + ++ ++G P+ ++N L+ RD + LA A F +M +G+ R
Sbjct: 224 ACAFYLQLLDAGLPPEAKLFNVLM------RDLVRLGELASAQNVFDEMQSRGVRR---T 274
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+V++N ++ +A ++D L + + E+ + PD+YTY ++ + G I++ V
Sbjct: 275 VVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFE 334
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
+M KP+ + F +LID++ K+ + M ++ + + +P T+N+++ +AR
Sbjct: 335 KMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRAR 394
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVST 397
A + +M + P +TY +I GYC + + A EI + G + T
Sbjct: 395 DLKSASGIVVEMRSAGLRPDTVTYTTLID--GYCKEEELDMAMEIKQNMVAEGVGLDEVT 452
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
A++ G +A+ + G+ PD++TY ++ A+ + + +LLK M+
Sbjct: 453 YTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQ 512
Query: 458 QNGIVPN 464
G P
Sbjct: 513 NKGRKPG 519
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 109/239 (45%), Gaps = 9/239 (3%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
LE+ R M ++R D Y+ ++ + + + A + EMR++G RPD Y LI
Sbjct: 365 LELHREM-RERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLID 423
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
+ K + L A+ Q M E + VTY L+ ++A + E+ E
Sbjct: 424 GYC----KEEELDMAMEIKQNMVA-EGVGLDEVTYTALISGLSKAGRSADAERVLGEMME 478
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
+ L PD TY V+DA+ + G +K +L M++ KP ++T+N++++ + K
Sbjct: 479 AGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKN 538
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
+ + ++++ P T+N ++ + K GK + + +A P Y I+
Sbjct: 539 ADMLLNAMINIGVSPDDITYNILLDGHCK---HGKVTDIEELKSAKGTVPDLGVYTSIV 594
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 170/364 (46%), Gaps = 14/364 (3%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMW--LFSEMRNSGCR 177
++D + L + M++ + +D YS +I + + ++ +M +++E+ +
Sbjct: 195 ARNDDLEKALNLMSRMRRD-GFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIE 253
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
D + N +I + D +A++ F M P T ++ A A +
Sbjct: 254 LDGQLLNDIIVGFAKSGDVNRAMS-----FLAMVQGNGLSPKTATLVAVITALGNAGRTE 308
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ A+F+EL E L P YN ++ Y K G +K+ ES++S M+ + PD T++LLI
Sbjct: 309 EAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLI 368
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK-- 355
D+Y ++ V K + S +P F+ ++ +Y R +GK + FQ + M+
Sbjct: 369 DAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASY---RDRGKWQKSFQVLREMRNS 425
Query: 356 -YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+P Y +I +G C+ + A FD + G T N +++ +C +G +A
Sbjct: 426 GVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKA 485
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
+ LFE G +P ++TY ++ ++ + E V+ LL +M+ G++ N + ++
Sbjct: 486 EELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDI 545
Query: 475 FSSS 478
+ S
Sbjct: 546 YGQS 549
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 146/322 (45%), Gaps = 9/322 (2%)
Query: 145 TGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKAL 204
T +I +G G+T A +F E++ G P YNAL+ ++ K +L A
Sbjct: 291 TATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYV----KTGSLKDAE 346
Query: 205 GYFQKMKGMERC--KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
+M ER P+ TY++L+ A A A + + KE+ S + P+ Y ++ ++
Sbjct: 347 SIVSEM---ERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRIL 403
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+Y G ++ VL M+++ PD +N++ID++GK D F + +
Sbjct: 404 ASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQ 463
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P T+N++I + K+ KAE +F+ M +P TY +I +G + + +
Sbjct: 464 PDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTL 523
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
++ G V T +++ Y +G +A E ++G+ P S+ Y L AY +
Sbjct: 524 LGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQ 583
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
+ E + M +G+ P+
Sbjct: 584 RGLSEQAINAFRVMRADGLKPS 605
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 157/369 (42%), Gaps = 22/369 (5%)
Query: 96 LVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVM 155
LV + R+E +FEEL K+ + T Y+ L+
Sbjct: 294 LVAVITALGNAGRTEEAEAIFEEL-----------------KEGGLMPRTRAYNALLKGY 336
Query: 156 GKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER 215
K G + A + SEM SG PD Y+ LI A+ + A A ++M+
Sbjct: 337 VKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYAN----AGRWESARIVLKEMEA-SG 391
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
+PN ++ +L + + + +E+ S ++PD + YN ++D +GK +
Sbjct: 392 VRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHAL 451
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
+ RM+ +PD +T+N LID + K +K E++F+++ S P T+N MI ++
Sbjct: 452 ATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSF 511
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
G+ + + KM + + +TY ++ +YG A E + + +G
Sbjct: 512 GEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSS 571
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+ NA++ AY GL +A F G+ P L A+ + +L+
Sbjct: 572 TMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQY 631
Query: 456 MEQNGIVPN 464
M++N + P+
Sbjct: 632 MKENDLKPD 640
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 145/323 (44%), Gaps = 5/323 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS LI G+ A + EM SG RP+ V++ ++ ++ RD+ K K+
Sbjct: 360 DEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASY---RDRGK-WQKS 415
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
++M+ P+ YN+++ + +D A F + + PD T+N ++D
Sbjct: 416 FQVLREMRN-SGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLID 474
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ K+G + E + M+ + C P T+N++I+S+G+++ ++ ++ + +
Sbjct: 475 CHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLA 534
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T+ +++ YG++ A + M ++ PS Y +I Y +A F
Sbjct: 535 NVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAF 594
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ G V LN+++ A+ + EA + + + PD TY L KA +
Sbjct: 595 RVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRV 654
Query: 444 NMKELVQKLLKRMEQNGIVPNKR 466
+ V + + M +G P+++
Sbjct: 655 EKFDKVPAVYEEMTLSGCTPDRK 677
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 113/255 (44%), Gaps = 7/255 (2%)
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y+IL+ A ++ + + F L P TYN ++ A +N +++ +++SRM+
Sbjct: 157 YSILIHALGRSEKLYEA---FLLSQRQTLTP--LTYNALIGACARNDDLEKALNLMSRMR 211
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDK--MEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
+ D + ++ +I S + D +++++ + K + N +I+ + K+
Sbjct: 212 RDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGD 271
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
+A + +P T +IT G A IF+EL + G + NA
Sbjct: 272 VNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNA 331
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+L+ Y G +A+ + G +PD TY LL AY A E + +LK ME +G
Sbjct: 332 LLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASG 391
Query: 461 IVPNKRFFLEALETF 475
+ PN F L ++
Sbjct: 392 VRPNSYVFSRILASY 406
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 135/333 (40%), Gaps = 12/333 (3%)
Query: 134 WMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT 193
W+++ + +YS LI +G+ + A +L S+ + P YNALI A
Sbjct: 143 WLERHNLCFSYELLYSILIHALGRSEKLYEA-FLLSQRQTL----TPLTYNALIGACARN 197
Query: 194 RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ--VNALFKELHESIL 251
D L KAL +M+ + + V Y+ ++++ + D + ++ E+ +
Sbjct: 198 DD----LEKALNLMSRMR-RDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKI 252
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
D N ++ + K+G + S L+ ++ N P T +I + G ++ E
Sbjct: 253 ELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEA 312
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+F+ L P +N+++ Y K AE + +M ++P TY +I Y
Sbjct: 313 IFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYA 372
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
AR + E+ G + +L +Y G ++ + N GV+PD
Sbjct: 373 NAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRH 432
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y ++ + K N + RM G+ P+
Sbjct: 433 FYNVMIDTFGKCNCLDHALATFDRMRMEGVQPD 465
>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Cucumis sativus]
Length = 542
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 110/485 (22%), Positives = 215/485 (44%), Gaps = 34/485 (7%)
Query: 2 ALTNLSPYSLRLSTLSSSSASSSSSSSSSSFNQSSSQNYNFTHRHIPLSLRTRPRTGICC 61
+L++L R S+ +SA S S S + + NQ+S + + H L + R
Sbjct: 6 SLSSLQRLFPRTSSFQYASARSVSCSKTITKNQTSICISSHCNEHSTLLIPNRN------ 59
Query: 62 VWTRPRSKRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVV--RSEHCF------ 113
+T RS R SK+ ++ +S + + + + K+ K++ C
Sbjct: 60 -YTSHRSTHHRIEH---SKQDLKASQKSIVESDEIAQDAEKFCKLISKNPNSCIESLLDG 115
Query: 114 --------LLFEELGK-SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLA 164
L+ E L K S+ L FRW +KQ+ + T Y+ LI +GK Q +
Sbjct: 116 APMELSPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVI 175
Query: 165 MWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYN 224
L S+M+ G + ALIT +A+ + +A+ F+KM+ + + +N
Sbjct: 176 WNLVSDMKRKGILSRETF--ALITRRY---ARARKVKEAVESFEKMEKFG-FQMGVSDFN 229
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
LL ++RNV + +F ++ PDI +Y +++ +G++ + ++ V M+
Sbjct: 230 RLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDE 289
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
+PD++TF +LI+++ K + +D+ ++F + KP+ F ++I G + +A
Sbjct: 290 GFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEA 349
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
F+++ + P TY ++ Y + ++ A + DE+ K G T + +L
Sbjct: 350 LEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHH 409
Query: 405 YCMNGLPTEADLLFEN-SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
EA +F+ S G P STY ++ + + ++ ++ M+ G++P
Sbjct: 410 LIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLP 469
Query: 464 NKRFF 468
F
Sbjct: 470 GMHLF 474
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 10/211 (4%)
Query: 109 SEHCFL-LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWL 167
S H F L LG + + LE F + K + + Y+ ++ + A +
Sbjct: 329 SPHVFCTLINGLGSEKRLKEALEFFEQL-KLSGFAPEAPTYNAVVGAYCWSMKMAYAYRM 387
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
EMR SG P+ Y+ + LH K + +A FQ+M C+P + TY+I++
Sbjct: 388 VDEMRKSGVGPNSRTYDII----LHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMI 443
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
R VD ++ E+ + P ++ ++ ++++ +++ + M +
Sbjct: 444 RMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIR 503
Query: 288 PDIITF-NL---LIDSYGKRQAFDKMEQVFK 314
P F NL L+D K A E++ K
Sbjct: 504 PPATMFSNLKQALLDDGRKDTALLMAEKIKK 534
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 164/371 (44%), Gaps = 6/371 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ + L K ++ + EVFR M Q D ++ LI + G+ AM + EM+
Sbjct: 233 VLKGLCKHRRFDKAKEVFRAMD-QCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQR 291
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G PD ++ LI TR K + A Y ++MKG+ P+ V Y +++ +A
Sbjct: 292 GVTPDVVSFSCLI-GLFSTRGK---MDHAAAYLREMKGLGLV-PDGVIYTMVIGGFCRAG 346
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
++ + + E+ PD+ TYN +++ K + + E +L+ MK PD+ TF
Sbjct: 347 SMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFT 406
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
LI Y + F+K Q+F +L+H + +P + +NS+I + KA ++ M A
Sbjct: 407 TLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAR 466
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ P+ +TY +I + V A DE+ G + T N++++ YC +G +
Sbjct: 467 EIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKG 526
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
+ + PD T+ L Y K + ME+ + P+ + +
Sbjct: 527 QQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIING 586
Query: 475 FSSSLAGSQSG 485
FS ++G
Sbjct: 587 FSEQGNMEEAG 597
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 158/377 (41%), Gaps = 43/377 (11%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ ++ ++ MQ QR D +S LI + +G+ A EM+ G PD +Y +
Sbjct: 280 EAMKFYKEMQ-QRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMV 338
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQAR----------- 234
I +A ++++AL +M G+ C P++VTYN LL C Q R
Sbjct: 339 IGGFC----RAGSMSEALRVRDEMVGLG-CLPDVVTYNTLLNGLCKQHRLLDAEELLNEM 393
Query: 235 -----------------------NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMI 271
N ++ LF L L PD+ YN ++D + G +
Sbjct: 394 KERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDL 453
Query: 272 KEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM 331
+ + M + + P+ +T+++LIDS+ ++ ++ ++ P + T+NS+
Sbjct: 454 AKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSI 513
Query: 332 IINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGK 391
I Y ++ K + QKM P IT+ +I Y +N+ A +F+ + K
Sbjct: 514 IKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMV 573
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY-TKANMKELVQ 450
T N ++ + G EA +F+ G+ PD TY L + T N KE Q
Sbjct: 574 QPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQ 633
Query: 451 KLLKRMEQNGIVPNKRF 467
L M G P+ +F
Sbjct: 634 -LHDEMMHRGFAPDDKF 649
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 124/276 (44%), Gaps = 5/276 (1%)
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCK-PNIVTYNILLRACAQARNVDQVNALFKELHES 249
+H+ K+ KA +M+ +RC P++VT+N+L+ A +A +VD AL +
Sbjct: 164 VHSYCKSLEFDKADTVISEME--KRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANK 221
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
L P I T+N V+ K+ + + V M PD+ +FN+LI + + ++
Sbjct: 222 GLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEA 281
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYG-KARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+ +K + P + +F+ +I + + ++ A Y+ ++M + P + Y +I
Sbjct: 282 MKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYL-REMKGLGLVPDGVIYTMVIG 340
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
+ ++S A + DE+ LG V T N +L C +A+ L GVTP
Sbjct: 341 GFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTP 400
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
D T+ L Y + E +L + + P+
Sbjct: 401 DLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPD 436
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 117/279 (41%), Gaps = 46/279 (16%)
Query: 242 LFKELHESILAPD----IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
L +E + +L+ D YT N ++ +Y K+ + ++V+S M+ PD++T N+LI
Sbjct: 140 LAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLI 199
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT----- 352
D+ + D + S+ + KP + TFNS++ K R KA+ VF+ M
Sbjct: 200 DARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVA 259
Query: 353 ---------------------AMKY---------TPSFITYECIITMYGYCDNVSRAREI 382
AMK+ TP +++ C+I ++ + A
Sbjct: 260 PDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAY 319
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
E+ LG ++ +C G +EA + + +G PD TY L K
Sbjct: 320 LREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCK 379
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
+ ++LL M++ G+ P+ L TF++ + G
Sbjct: 380 QHRLLDAEELLNEMKERGVTPD-------LCTFTTLIHG 411
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 93/236 (39%), Gaps = 35/236 (14%)
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGK----RQAFDKM----------------------- 309
++S + ++ P F+LLI +Y + R+AF+
Sbjct: 74 IVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALS 133
Query: 310 --------EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
E+ ++ ++ S + T N M+ +Y K+ KA+ V +M P +
Sbjct: 134 RAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVV 193
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
T+ +I +V A + D ++ G + T N++L+ C + +A +F
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAM 253
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
V PD ++ +L + + E K K M+Q G+ P+ F + FS+
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFST 309
>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71060, mitochondrial-like [Cucumis sativus]
Length = 542
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 110/485 (22%), Positives = 215/485 (44%), Gaps = 34/485 (7%)
Query: 2 ALTNLSPYSLRLSTLSSSSASSSSSSSSSSFNQSSSQNYNFTHRHIPLSLRTRPRTGICC 61
+L++L R S+ +SA S S S + + NQ+S + + H L + R
Sbjct: 6 SLSSLQRLFPRTSSFQYASARSVSCSKTITKNQTSICISSHCNEHSTLLIPNRN------ 59
Query: 62 VWTRPRSKRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVV--RSEHCF------ 113
+T RS R SK+ ++ +S + + + + K+ K++ C
Sbjct: 60 -YTSHRSTHHRIEH---SKQDLKASQKSIVESDEIAQDAEKFCKLISKNPNSCIESLLDG 115
Query: 114 --------LLFEELGK-SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLA 164
L+ E L K S+ L FRW +KQ+ + T Y+ LI +GK Q +
Sbjct: 116 APMELSPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVI 175
Query: 165 MWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYN 224
L S+M+ G + ALIT +A+ + +A+ F+KM+ + + +N
Sbjct: 176 WNLVSDMKRKGILSRETF--ALITRRY---ARARKVKEAVESFEKMEKFG-FQMGVSDFN 229
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
LL ++RNV + +F ++ PDI +Y +++ +G++ + ++ V M+
Sbjct: 230 RLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDE 289
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
+PD++TF +LI+++ K + +D+ ++F + KP+ F ++I G + +A
Sbjct: 290 GFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEA 349
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
F+++ + P TY ++ Y + ++ A + DE+ K G T + +L
Sbjct: 350 LEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHH 409
Query: 405 YCMNGLPTEADLLFEN-SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
EA +F+ S G P STY ++ + + ++ ++ M+ G++P
Sbjct: 410 LIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLP 469
Query: 464 NKRFF 468
F
Sbjct: 470 GMHLF 474
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 88/211 (41%), Gaps = 10/211 (4%)
Query: 109 SEHCFL-LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWL 167
S H F L LG + + LE F + K + + Y+ ++ + A +
Sbjct: 329 SPHVFCTLINGLGSEKRLKEALEFFEQL-KLSGFAPEAPTYNAVVGAYCWSMKMAYAYRM 387
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
EMR SG P+ Y+ + LH K + +A FQ+M C+P + TY+I++
Sbjct: 388 VDEMRKSGVGPNSRTYDII----LHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMI 443
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
R VD ++ E+ + P ++ ++ ++++ +++ + M +
Sbjct: 444 RMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIR 503
Query: 288 PDIITF-NL---LIDSYGKRQAFDKMEQVFK 314
P F NL L+D K A E++ K
Sbjct: 504 PPATMFSNLKQALLDDGRKDTALLMAEKIXK 534
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 158/343 (46%), Gaps = 10/343 (2%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
Q L FR M+K + D IY+ L+ + G A+ + EM GC D YN +
Sbjct: 276 QALVYFRDMKK-FGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 334
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCK-PNIVTYNILLRACAQARNVDQVNALFKE 245
+ K K L A F +M +ER P+ T+ L+ Q N+ + +LF
Sbjct: 335 LNGLC----KEKMLTDADKLFDEM--VERGALPDFYTFTTLIHGHCQDGNMTKALSLFGT 388
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ + + PDI YN ++D + K G +++ + M S + P+ IT+ +LI++Y
Sbjct: 389 MTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGH 448
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+ +++ ++ KPTL T N++I Y ++ KA+ +M A P I+Y
Sbjct: 449 VSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNT 508
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+I + DN+ +A +++ K G + T N ++ +C G EA+L+ G
Sbjct: 509 LINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKG 568
Query: 426 VTPDSSTYKLLYKAY-TKANMKELVQKLLKRMEQNGIVPNKRF 467
+ PD STY L + T+ N+ E + M Q G P+ F
Sbjct: 569 INPDRSTYTALINGHVTQDNLNEAF-RFHDEMLQRGFAPDDVF 610
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 143/321 (44%), Gaps = 5/321 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT Y+ L+ ++ A +F EM G PD +++LI R L +A
Sbjct: 222 DTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRH----LDQA 277
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L YF+ MK P+ V Y +L+ + N+ + + E+ E D+ YN +++
Sbjct: 278 LVYFRDMKKFGLV-PDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILN 336
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K M+ + + + M PD TF LI + + K +F ++ KP
Sbjct: 337 GLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKP 396
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ +N++I + K KA ++ M + K P+ ITY +I Y +VS A ++
Sbjct: 397 DIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLW 456
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
D + + G + T N +++ YC +G ++AD GV PD +Y L + +
Sbjct: 457 DVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVRE 516
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+ + + +ME+ G++P+
Sbjct: 517 DNMDKAFLWINKMEKEGLLPD 537
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 150/353 (42%), Gaps = 10/353 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
LL ++ K + E FR + + + Y+ + L+ + K LA + E+
Sbjct: 53 LLIRTYVQARKLREGTEAFRIL-RSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVR 111
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
SG + N ++ A K + +M+G ++VTYN L+ A +
Sbjct: 112 SGIELNVYTLNIMVNALC----KDGKFDDVKSFLSEMEG-NGIYADMVTYNTLIGAYCRE 166
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+++ + + + L P ++TYN +++ K G + +L M + PD T+
Sbjct: 167 GLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTY 226
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N L+ +R F + +++F ++ P L +F+S+I + + R +A F+ M
Sbjct: 227 NTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKK 286
Query: 354 MKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P + Y + M+GYC N+ A +I DE+ + G + V N +L C +
Sbjct: 287 FGLVPDNVIYT--VLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKML 344
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
T+AD LF+ G PD T+ L + + L M Q I P+
Sbjct: 345 TDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPD 397
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 107/255 (41%), Gaps = 4/255 (1%)
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
C N + +++L+R QAR + + F+ L I N ++ K ++
Sbjct: 44 CGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAW 103
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
V + + + ++ T N+++++ K FD ++ + + + T+N++I Y
Sbjct: 104 EVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAY 163
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDM 393
+ L +A + M PS TY II G C +RA+ I E+ +G
Sbjct: 164 CREGLLEEAFEIMNSMADKGLKPSLFTYNAIIN--GLCKKGRYARAKGILIEMLNIGLSP 221
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
+T N +L C +EA +F GV PD ++ L +++ +
Sbjct: 222 DTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYF 281
Query: 454 KRMEQNGIVPNKRFF 468
+ M++ G+VP+ +
Sbjct: 282 RDMKKFGLVPDNVIY 296
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 159/358 (44%), Gaps = 44/358 (12%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y ++ + K+G T LA L ++M P +YN +I K K + A
Sbjct: 220 DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC----KYKHMDDA 275
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
L F++M KG+ +PN+VTY+ L+ + L ++ E + PD++T++ +
Sbjct: 276 LNLFKEMETKGI---RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 332
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+DA+ K G + E E + M P I+T++ LI+ + D+ +Q+F+ ++
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 392
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P + T+N++I + K + + VF++M+ + +TY +I + A+E
Sbjct: 393 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 452
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE-----------NSHNM------ 424
IF E+ G + T N +L+ C NG +A ++FE ++N+
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512
Query: 425 ------------------GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
GV PD Y + + + KE L K M+++G +PN
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPN 570
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 136/313 (43%), Gaps = 5/313 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS LI+ + G+ A L S+M PD ++ALI A + K L +A +
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV----KEGKLVEAEKLY 349
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M P+IVTY+ L+ +D+ +F+ + PD+ TYN ++ + K
Sbjct: 350 DEMVK-RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 408
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
++E V M + +T+N+LI + D +++FK ++ P + T
Sbjct: 409 YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N+++ K KA VF+ + K P+ TY +I V ++F LS
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G V N M+ +C G EAD LF+ G P+S Y L +A + +E
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 588
Query: 448 LVQKLLKRMEQNG 460
+L+K M G
Sbjct: 589 ASAELIKEMRSCG 601
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 153/352 (43%), Gaps = 40/352 (11%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+SKL++ + K + + + L +M+N G + Y+ LI ALA LG
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALA-VLGKM 142
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K+ G E PNIVT + LL ++ + + AL ++ + P+ T+N ++
Sbjct: 143 MKL-GYE---PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ E +++ RM + C+PD++T+ ++++ KR D + + K +P +
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM---YGYCDNVSR------ 378
+N++I K + A +F++M P+ +TY +I+ YG + SR
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 379 --------------------------AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
A +++DE+ K D + T ++++ +CM+
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA +FE + PD TY L K + K E ++ + M Q G+V N
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 430
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 16/234 (6%)
Query: 109 SEHCF-------LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQT 161
S+HCF L + K + + +EVFR M QR + +T Y+ LI + + G
Sbjct: 389 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS-QRGLVGNTVTYNILIQGLFQAGDC 447
Query: 162 RLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV 221
+A +F EM + G P+ YN L+ KA+ Y Q+ K ME P I
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV-VFEYLQRSK-ME---PTIY 502
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
TYNI++ +A V+ LF L + PD+ YN ++ + + G +E +++ M
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Query: 282 KSNQCKPDIITFNLLIDSY---GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
K + P+ +N LI + G R+A ++ + +S + + T+ +M+
Sbjct: 563 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 118/278 (42%), Gaps = 5/278 (1%)
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L A+ F +M R P+I+ ++ LL A A+ D V +L +++ + + YTY+
Sbjct: 62 LDDAVALFGEMVK-SRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
+++ + + + +VL +M +P+I+T + L++ Y + + + + +
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVS 377
+P TFN++I +A + +M A P +TY ++ G C +
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN--GLCKRGDTD 238
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
A + +++ + + V N +++ C +A LF+ G+ P+ TY L
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+LL M + I P+ F ++ F
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 336
>gi|110740599|dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]
Length = 546
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 128/247 (51%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P++ YN++LR +A+ D + LF E+ + LAPD YTY+ ++ ++GK GM S
Sbjct: 21 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 80
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L +M+ ++ D++ ++ LI+ + + K +F L S P L +NSMI YGK
Sbjct: 81 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGK 140
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
A+L +A + ++M P+ ++Y ++++Y A +F E+ ++ + ++T
Sbjct: 141 AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTT 200
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
N M++ Y + EAD LF + M + P+ +Y + + Y +A + L + M+
Sbjct: 201 CNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQ 260
Query: 458 QNGIVPN 464
+ I N
Sbjct: 261 RKDIEQN 267
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 166/378 (43%), Gaps = 40/378 (10%)
Query: 123 DKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSV 182
+ W + L + W+ ++ Y Y+ ++ + + Q +A LF EMR PD
Sbjct: 1 NDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYT 60
Query: 183 YNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL 242
Y+ LIT+ K AL + QKM+ +R ++V Y+ L+ + + + ++
Sbjct: 61 YSTLITSF----GKEGMFDSALSWLQKME-QDRVSGDLVLYSNLIELSRRLCDYSKAISI 115
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGM-------IKEME-------------------- 275
F L S + PD+ YN +++ YGK + IKEM
Sbjct: 116 FSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVE 175
Query: 276 --------SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
SV + MK C D+ T N++ID YG+ + +++F SL +P + +
Sbjct: 176 NHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVS 235
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N+++ YG+A L G+A ++F+ M + +TY +I +YG +A + E+
Sbjct: 236 YNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQ 295
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G + T + ++ + G A LF+ + GV D Y+ + AY + +
Sbjct: 296 SRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMG 355
Query: 448 LVQKLLKRMEQNGIVPNK 465
++LL ++ +P +
Sbjct: 356 HAKRLLHELKLPDNIPRE 373
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 146/308 (47%), Gaps = 7/308 (2%)
Query: 134 WMQK--QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
W+QK Q D +YS LI + + A+ +FS ++ SG PD YN++I +
Sbjct: 80 WLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVY- 138
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KAK +A ++M PN V+Y+ LL + + ++F E+ E
Sbjct: 139 ---GKAKLFREARLLIKEMNEAG-VLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNC 194
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
A D+ T N ++D YG+ M+KE + + ++ +P+++++N ++ YG+ + F +
Sbjct: 195 ALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIH 254
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+F+ + + + T+N+MI YGK KA + Q+M + P+ ITY II+++G
Sbjct: 255 LFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWG 314
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ RA +F +L G ++ M+ AY GL A L P +
Sbjct: 315 KAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRET 374
Query: 432 TYKLLYKA 439
+L KA
Sbjct: 375 AITILAKA 382
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 148/336 (44%), Gaps = 9/336 (2%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ +T YS L++V + + A+ +F+EM+ C D + N +I + D K
Sbjct: 160 LPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQL-DMVKEAD 218
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+ +KM +PN+V+YN +LR +A + LF+ + + ++ TYN +
Sbjct: 219 RLFWSLRKMD----IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTM 274
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ YGK ++ +++ M+S +P+ IT++ +I +GK D+ +F+ L S
Sbjct: 275 IKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGV 334
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
+ + +MI+ Y + L G A+ + ++ P I E IT+ A
Sbjct: 335 EIDQVLYQTMIVAYERVGLMGHAKRLLHELK----LPDNIPRETAITILAKAGRTEEATW 390
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+F + + G+ +S M+ Y N +FE G PDS+ ++ AY
Sbjct: 391 VFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYG 450
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
K E + + M++ G V + L +SS
Sbjct: 451 KQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSS 486
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 139/314 (44%), Gaps = 6/314 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI K G AM + M C P+ Y++L LH KA L +A
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSL----LHGLCKAGDLDQA 238
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L F++M + C PN+VTY L+ A VD L E+ + PD +YN ++D
Sbjct: 239 LDLFRRMTS-KGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLD 297
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-K 322
Y + G I+E + + M + C PD IT+ L+ + ++ + +++ +
Sbjct: 298 GYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGID 357
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P + T++ ++ Y +A+ +A Q+M A P+ +TY +I V A E+
Sbjct: 358 PDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEV 417
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+ + V T N+++ A C G EA L G+ P TY L + +++
Sbjct: 418 LKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSR 477
Query: 443 ANMKELVQKLLKRM 456
E+ +L + M
Sbjct: 478 TGRMEIAYELFEVM 491
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 166/374 (44%), Gaps = 54/374 (14%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ +I K Q + A+ F +MR P+ YN ++ KA+ +KA
Sbjct: 10 WTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLC----KARLTSKAYEVL 64
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL-HESILAPDIYTYNGVMDAYG 266
++M+ + P++VTY+ ++ + +D+ + +E+ +APD+ TY V+D
Sbjct: 65 KEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLC 124
Query: 267 KNG-------MIKEMES--------VLSRMKSNQC---------------------KPDI 290
++G M++EM+ S + + C KPD+
Sbjct: 125 RDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDV 184
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
+T+ LID + K +K ++ + K P + T++S++ KA +A +F++
Sbjct: 185 VTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRR 244
Query: 351 MTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
MT+ P+ +TY +I +G C V AR + DE++ + NA+L+ YC
Sbjct: 245 MTSKGCVPNVVTYTTLI--HGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRL 302
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME-QNGIVPNKRF 467
G EA LF+ PD TY L + + A+ E + LL+ M+ GI P+
Sbjct: 303 GRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPD--- 359
Query: 468 FLEALETFSSSLAG 481
+ T+S +AG
Sbjct: 360 ----VVTYSIVVAG 369
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 122/259 (47%), Gaps = 18/259 (6%)
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
C+P +VT+ I++ +A + Q A F+++ E +AP+ TYN V++ K + +
Sbjct: 3 CQPTVVTWTIIIDGFCKANQLKQALACFEKMRE-FVAPNERTYNVVVNGLCKARLTSKAY 61
Query: 276 SVLSRMKSNQ-CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM-HSKEKPTLPTFNSMII 333
VL M+ + PD++T++ +I+ + K+ D+ ++ + ++ P + T+ S++
Sbjct: 62 EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
+ +A + ++M P T+ +IT G+C+ AR++ DE KL K++
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT--GWCN----ARKV-DEALKLYKEI 174
Query: 394 --------KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
V T A+++ +C +G +A + P+ TY L KA
Sbjct: 175 LTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGD 234
Query: 446 KELVQKLLKRMEQNGIVPN 464
+ L +RM G VPN
Sbjct: 235 LDQALDLFRRMTSKGCVPN 253
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 97/212 (45%), Gaps = 7/212 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT Y+ L+ + G+ A LF EM C PD Y L+ + A L +A
Sbjct: 288 DTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCN----ASRLEEA 343
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ MK P++VTY+I++ ++A+ + +E+ +AP+ TY+ ++D
Sbjct: 344 RFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLID 403
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K G + VL M + + +P + TFN +I + + D+ ++ ++ +P
Sbjct: 404 GLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEP 463
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
+ T+ +++ + + G+ E ++ M+
Sbjct: 464 GMVTYTTLLEGFSRT---GRMEIAYELFEVMR 492
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 7/176 (3%)
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
+C+P ++T+ ++ID + K + F+ M P T+N ++ KARL KA
Sbjct: 2 ECQPTVVTWTIIIDGFCKANQLKQALACFEK-MREFVAPNERTYNVVVNGLCKARLTSKA 60
Query: 345 EYVFQKMTAMK-YTPSFITYECIITMYGYC--DNVSRAREIFDEL-SKLGKDMKVSTLNA 400
V ++M K P +TY +I G+C + RA EI E+ ++ G V T +
Sbjct: 61 YEVLKEMRDGKSVAPDLVTYSTVIN--GFCKQGEMDRACEILREMVTRDGIAPDVVTYTS 118
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
+++ C +G A + GV PD T+ L + A + KL K +
Sbjct: 119 VVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEI 174
>gi|255661198|gb|ACU25768.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 426
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 162/349 (46%), Gaps = 11/349 (3%)
Query: 130 EVFRWMQK--QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
+ W+QK Q D +YS LI + K A+ +FS ++ SG PD VYN++I
Sbjct: 27 DALSWLQKMEQDRVRGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGIMPDLVVYNSMI 86
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
KAK +A +M+ P+ V+Y LL + + + ++F E+
Sbjct: 87 NVF----GKAKLFREARSLISEMR-TAGVMPDTVSYTALLTMYVENKKFLEALSVFAEMR 141
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
E D+ T N ++D YG+ GM KE + + M+ +P+++++N L+ YG + F
Sbjct: 142 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGIEPNVVSYNTLLRVYGDAELFG 201
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
+ +F+ + + + T+NSM++ YGK KA + Q+M + P+ ITY II
Sbjct: 202 EAIHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTII 261
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
+++G + RA +F++L G ++ M+ AY GL + A L H + T
Sbjct: 262 SIWGKVGKLDRAAILFEKLRSSGIEIDQVLYQTMIVAYERAGLVSHAKRLL---HELK-T 317
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
PD+ +A E + ++ G V + F ++ FS
Sbjct: 318 PDNIPRDTAIHILARAGRIEEATWVFRQAIDAGEVKDITVFERMIDLFS 366
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 151/320 (47%), Gaps = 5/320 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS LI GK+G A+ +M R D +Y+ LI D +KA++
Sbjct: 8 DRYTYSTLITYFGKEGLFDDALSWLQKMEQDRVRGDLVLYSNLIELSRKLCDYSKAIS-- 65
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F ++K P++V YN ++ +A+ + +L E+ + + PD +Y ++
Sbjct: 66 --IFSRLK-RSGIMPDLVVYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYTALLT 122
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
Y +N E SV + M+ +C D+ T N++ID YG+ + +++F S+ +P
Sbjct: 123 MYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGIEP 182
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ ++N+++ YG A L G+A ++F+ M + +TY ++ +YG +A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
E+ G + T + ++ + G A +LFE + G+ D Y+ + AY +A
Sbjct: 243 QEMQSRGIEPNAITYSTIISIWGKVGKLDRAAILFEKLRSSGIEIDQVLYQTMIVAYERA 302
Query: 444 NMKELVQKLLKRMEQNGIVP 463
+ ++LL ++ +P
Sbjct: 303 GLVSHAKRLLHELKTPDNIP 322
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 109/214 (50%)
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
L+PD YTY+ ++ +GK G+ + S L +M+ ++ + D++ ++ LI+ K + K
Sbjct: 5 LSPDRYTYSTLITYFGKEGLFDDALSWLQKMEQDRVRGDLVLYSNLIELSRKLCDYSKAI 64
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+F L S P L +NSMI +GKA+L +A + +M P ++Y ++TMY
Sbjct: 65 SIFSRLKRSGIMPDLVVYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYTALLTMY 124
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
A +F E+ ++ + ++T N M++ Y G+ EAD LF + +G+ P+
Sbjct: 125 VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGIEPNV 184
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+Y L + Y A + L + M++ I N
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQN 218
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 124/311 (39%), Gaps = 69/311 (22%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +Y+ +I V GK R A L SEMR +G PD Y AL+T ++ K +A
Sbjct: 78 DLVVYNSMINVFGKAKLFREARSLISEMRTAGVMPDTVSYTALLTMYVEN----KKFLEA 133
Query: 204 LGYFQKMK---------------------GMER-------------CKPNIVTYNILLRA 229
L F +M+ GM + +PN+V+YN LLR
Sbjct: 134 LSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGIEPNVVSYNTLLRV 193
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
A + LF+ + + ++ TYN +M YGK ++ +++ M+S +P+
Sbjct: 194 YGDAELFGEAIHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPN 253
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE---- 345
IT++ +I +GK D+ +F+ L S + + +MI+ Y +A L A+
Sbjct: 254 AITYSTIISIWGKVGKLDRAAILFEKLRSSGIEIDQVLYQTMIVAYERAGLVSHAKRLLH 313
Query: 346 ---------------------------YVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
+VF++ +E +I ++ S
Sbjct: 314 ELKTPDNIPRDTAIHILARAGRIEEATWVFRQAIDAGEVKDITVFERMIDLFSKYKKYSN 373
Query: 379 AREIFDELSKL 389
E+FD++ L
Sbjct: 374 IVEVFDKMRGL 384
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 127/298 (42%), Gaps = 37/298 (12%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
K+L+ L VF M++ + + D + +I V G+ G + A LF MR G P+ Y
Sbjct: 129 KFLEALSVFAEMREIKC-LLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGIEPNVVSY 187
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
N L+ + A+ +A+ F+ M+ + + N+VTYN ++ + ++ N L
Sbjct: 188 NTLLRVY----GDAELFGEAIHLFRLMQRKD-IEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY--- 300
+E+ + P+ TY+ ++ +GK G + + +++S+ + D + + +I +Y
Sbjct: 243 QEMQSRGIEPNAITYSTIISIWGKVGKLDRAAILFEKLRSSGIEIDQVLYQTMIVAYERA 302
Query: 301 -----GKRQAFD--------------------KMEQ---VFKSLMHSKEKPTLPTFNSMI 332
KR + ++E+ VF+ + + E + F MI
Sbjct: 303 GLVSHAKRLLHELKTPDNIPRDTAIHILARAGRIEEATWVFRQAIDAGEVKDITVFERMI 362
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
+ K + VF KM ++Y ++ YG +A +++ E+ G
Sbjct: 363 DLFSKYKKYSNIVEVFDKMRGLEYFSDSYVIALVLNAYGKLHEFEKANDVYTEMQDEG 420
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 157/349 (44%), Gaps = 10/349 (2%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
+F M K R D+ Y I+ M K+G+ A + +M+ G RP YN LI +
Sbjct: 248 IFDLM-KCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGY 306
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
+ + L A Y KM E P + TYN+L+ A +D+ + + KE+ E
Sbjct: 307 CNKGN----LEMAFDYRDKMV-REGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKG 361
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
L PD TYN +++ Y + G +K+ ++ M S +P +T+ LI KR + +
Sbjct: 362 LVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQAD 421
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+F+ ++ P L FN++I + +A + ++M MK P +T+ + M
Sbjct: 422 DLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTL--MQ 479
Query: 371 GYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
G C V ARE+ +E+ G + N ++ Y G +A + + ++G P
Sbjct: 480 GRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNP 539
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
TY L + K + ++LLK M GI PN +L +E +
Sbjct: 540 TLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGIGN 588
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 158/357 (44%), Gaps = 21/357 (5%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
EL + D +C + M K + I + ++++ K +T A L++EM +
Sbjct: 133 ELKRGDDAFECFD----MMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIK 188
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNV 236
+N +I L K K + +G + + KPN+VTYN ++ C++ R V
Sbjct: 189 SSVVTFNIMINV-LCKEGKLKKAKEFIGLMEALG----IKPNVVTYNTIIHGYCSRGR-V 242
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
+ +F + + PD YTY + K G ++E +L +MK +P +T+N L
Sbjct: 243 EGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTL 302
Query: 297 IDSYGKR----QAFDKMEQVFK-SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
ID Y + AFD +++ + LM PT+ T+N +I +A+ + ++M
Sbjct: 303 IDGYCNKGNLEMAFDYRDKMVREGLM-----PTVSTYNMLIHALFLDCKMDEADGIIKEM 357
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+ P +TY +I Y C NV +A + DE+ G T +++ G
Sbjct: 358 SEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRM 417
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+AD LFE G+ PD + L + + +LK M+Q +VP++ F
Sbjct: 418 KQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTF 474
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 144/341 (42%), Gaps = 21/341 (6%)
Query: 143 ADTGIYSKLIA--VMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
D I SK +A V+ ++ ++ L E NSG V+N L A K L
Sbjct: 64 GDLDIKSKCLAMAVISHAPNSKPSLQLLKETINSGVYSIREVFNELGVARGVLGIKTYVL 123
Query: 201 --------------AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
A F MKG + P++ N +L ++ ++ L+ E+
Sbjct: 124 YDLLIRACCELKRGDDAFECFDMMKG-KGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEM 182
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
+ + T+N +++ K G +K+ + + M++ KP+++T+N +I Y R
Sbjct: 183 FRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRV 242
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ +F + KP T+ S I K +A + +KM + P+ +TY +
Sbjct: 243 EGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTL 302
Query: 367 ITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
I GYC+ N+ A + D++ + G VST N ++ A ++ EAD + +
Sbjct: 303 ID--GYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEK 360
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
G+ PDS TY +L Y + + L M GI P +
Sbjct: 361 GLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTR 401
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 151/331 (45%), Gaps = 5/331 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +IA + + G+ A+ +F EM + G P+ YN +I H+ K L
Sbjct: 197 YNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHV----KGGDLEAGFRLR 252
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M + KPN+VTYN+LL + +D+ AL E+ + PD +TY+ + D +
Sbjct: 253 DQML-HDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTR 311
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + M S+ + T ++L++ K K +QVF+ L+H+ PT
Sbjct: 312 TGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVI 371
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N++I Y + R A +F++M + P ITY +I + V++A ++ E+
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 431
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
K G D V T N +++AY G + + + G+ D ++ + KA+ K
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+L M + PN + + ++ + S
Sbjct: 492 EAVAILDDMIYKDVAPNAQVYNSIIDAYIES 522
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 159/357 (44%), Gaps = 10/357 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMG--KKGQTRLAMWLFSEM 171
+LF+ L ++ + L +F K+ + G Y+ I + G K G+ A +F +
Sbjct: 304 ILFDGLTRTGESQTMLSLFAESLKKGVML---GAYTCSILLNGLCKDGKVAKAKQVFEML 360
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
++G P +YN LI + RD L A F++MK +P+ +TYN L+
Sbjct: 361 VHTGLVPTTVIYNTLINGYCQVRD----LRGAFCIFEQMKS-RHIRPDHITYNALINGLC 415
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ V + L E+ +S + P + T+N ++DAYG G +++ +VLS M+ K D+I
Sbjct: 416 KLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVI 475
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
+F ++ ++ K + + +++ P +NS+I Y ++ +A + +KM
Sbjct: 476 SFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKM 535
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+ S +TY ++ + A E+ L G V + N ++ A C G
Sbjct: 536 KNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDT 595
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+A L + + G+ P T L A A ++ L ++M + P+ +
Sbjct: 596 DKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIY 652
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 159/352 (45%), Gaps = 10/352 (2%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM 171
C +L L K K + +VF M + T IY+ LI + R A +F +M
Sbjct: 337 CSILLNGLCKDGKVAKAKQVFE-MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQM 395
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK--GMERCKPNIVTYNILLRA 229
++ RPD YNALI K + + KA +M+ G++ P++ T+N L+ A
Sbjct: 396 KSRHIRPDHITYNALINGLC----KLEMVTKAEDLVMEMEKSGVD---PSVETFNTLIDA 448
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
A +++ + ++ + + D+ ++ V+ A+ KNG I E ++L M P+
Sbjct: 449 YGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPN 508
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
+N +ID+Y + ++ + + + +S ++ T+N ++ ++ +AE +
Sbjct: 509 AQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIY 568
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
+ P ++Y II+ + +A E+ E++K G + T + ++ A G
Sbjct: 569 TLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAG 628
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ + L++ + V P SS Y ++ AY + V L K M + GI
Sbjct: 629 RVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 141/339 (41%), Gaps = 9/339 (2%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ D YS L + + G+++ + LF+E G Y I + +D A A
Sbjct: 296 LPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVML--GAYTCSILLNGLCKDGKVAKA 353
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
K + G+ P V YN L+ Q R++ +F+++ + PD TYN +
Sbjct: 354 KQVFEMLVHTGL---VPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNAL 410
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
++ K M+ + E ++ M+ + P + TFN LID+YG +K V +
Sbjct: 411 INGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGI 470
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
K + +F S++ + K +A + M P+ Y II Y + +A
Sbjct: 471 KSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALL 530
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ +++ G + T N +L+ C + EA+ L N G+ PD +Y + A
Sbjct: 531 LVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACC 590
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLA 480
+ +LL+ M + GI P L T S+LA
Sbjct: 591 NKGDTDKALELLQEMNKYGIRPT----LRTCHTLVSALA 625
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 143/328 (43%), Gaps = 14/328 (4%)
Query: 155 MGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME 214
+G+ R A F + +G RPD +N ++ A + D L AL ++M E
Sbjct: 135 VGRHADVRAA---FGLLVAAGARPDTFAWNKVVQACVAAGD----LDVALAMLRRMGRSE 187
Query: 215 RCKP-NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
P + +YN+++ ++ +F E+ + +AP+ TYN ++D + K G ++
Sbjct: 188 GAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEA 247
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
+ +M + KP+++T+N+L+ + D+ + + P F I+
Sbjct: 248 GFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPD--GFTYSIL 305
Query: 334 NYGKARLQGKAEYVFQKMT-AMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLG 390
G R G+++ + ++K Y C I + G C + V++A+++F+ L G
Sbjct: 306 FDGLTR-TGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTG 364
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
N ++ YC A +FE + + PD TY L K M +
Sbjct: 365 LVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAE 424
Query: 451 KLLKRMEQNGIVPNKRFFLEALETFSSS 478
L+ ME++G+ P+ F ++ + ++
Sbjct: 425 DLVMEMEKSGVDPSVETFNTLIDAYGTA 452
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 86/213 (40%), Gaps = 4/213 (1%)
Query: 253 PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
P + + N ++++ G ++ + + + +PD +N ++ + D +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGK---AEYVFQKMTAMKYTPSFITYECIITM 369
+ + S+ P F+ ++ G R GK A VF +M M P+ ITY +I
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWR-SGKGSDALKVFDEMVDMGVAPNRITYNTMIDG 238
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
+ ++ + D++ G V T N +L C G E L + + + PD
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPD 298
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
TY +L+ T+ + + L + G++
Sbjct: 299 GFTYSILFDGLTRTGESQTMLSLFAESLKKGVM 331
>gi|357462685|ref|XP_003601624.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490672|gb|AES71875.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 159/372 (42%), Gaps = 33/372 (8%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L + W + L + WM + Y +Y+ +I + + Q +LA LF EM G P
Sbjct: 134 LSREPDWQRSLAILDWMNEIAQYSPSLNVYNVVIRNVLRAKQWQLAHGLFDEMLQKGLSP 193
Query: 179 DPSVYNALITAHLH---------------TRDKAKA-----------------LAKALGY 206
D Y+ LIT H RD +KA+
Sbjct: 194 DKYTYSTLIT-HFSKQGLFDSSFFWLQQMERDNVSGDLVLYSNLIELSRKLCDYSKAISI 252
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F +KG P+++ N+++ +A+ + L +E+ ++ + P +Y+ ++ Y
Sbjct: 253 FNALKGSGNIVPDLIACNMMISVYGKAKLFREARLLLQEMRDNGVNPSTASYSTLLAIYV 312
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
N E S+ S M +C D+ T N++ID YG+ Q + + F + +P +
Sbjct: 313 DNQKFVEAVSLFSEMNEVECPIDLTTCNIMIDVYGQLQMIKEADCFFWGMRKMGIEPNVV 372
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
++N+++ YG+A L G+A ++F M + +TY +I++YG +A + E+
Sbjct: 373 SYNTVLRVYGEAGLFGEAVHLFSLMQMKGVPQNVVTYNTMISIYGKSLEHDKATNLIQEM 432
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
G T + ++ + G A +LF GV D Y+ + AY KA +
Sbjct: 433 QSRGIQPNAITYSTIISIWEKAGKLDRAAMLFHKLRTSGVKIDEILYQTMIVAYQKAGLV 492
Query: 447 ELVQKLLKRMEQ 458
++LL ++Q
Sbjct: 493 AHAKRLLNELKQ 504
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 130/279 (46%), Gaps = 1/279 (0%)
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
++L M + + P++ YN+++R +A+ + LF E+ + L+PD YTY+ +
Sbjct: 142 RSLAILDWMNEIAQYSPSLNVYNVVIRNVLRAKQWQLAHGLFDEMLQKGLSPDKYTYSTL 201
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ + K G+ L +M+ + D++ ++ LI+ K + K +F +L S
Sbjct: 202 ITHFSKQGLFDSSFFWLQQMERDNVSGDLVLYSNLIELSRKLCDYSKAISIFNALKGSGN 261
Query: 322 -KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P L N MI YGKA+L +A + Q+M PS +Y ++ +Y A
Sbjct: 262 IVPDLIACNMMISVYGKAKLFREARLLLQEMRDNGVNPSTASYSTLLAIYVDNQKFVEAV 321
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+F E++++ + ++T N M++ Y + EAD F MG+ P+ +Y + + Y
Sbjct: 322 SLFSEMNEVECPIDLTTCNIMIDVYGQLQMIKEADCFFWGMRKMGIEPNVVSYNTVLRVY 381
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSL 479
+A + L M+ G+ N + + + SL
Sbjct: 382 GEAGLFGEAVHLFSLMQMKGVPQNVVTYNTMISIYGKSL 420
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 149/350 (42%), Gaps = 37/350 (10%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
+I+V GK R A L EMR++G P + Y+ L+ ++ + +A+ F +M
Sbjct: 272 MISVYGKAKLFREARLLLQEMRDNGVNPSTASYSTLLAIYVDN----QKFVEAVSLFSEM 327
Query: 211 KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
+E C ++ T NI++ Q + + + + F + + + P++ +YN V+ YG+ G+
Sbjct: 328 NEVE-CPIDLTTCNIMIDVYGQLQMIKEADCFFWGMRKMGIEPNVVSYNTVLRVYGEAGL 386
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
E + S M+ +++T+N +I YGK DK + + + +P T+++
Sbjct: 387 FGEAVHLFSLMQMKGVPQNVVTYNTMISIYGKSLEHDKATNLIQEMQSRGIQPNAITYST 446
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC----------------D 374
+I + KA +A +F K+ I Y+ +I Y D
Sbjct: 447 IISIWEKAGKLDRAAMLFHKLRTSGVKIDEILYQTMIVAYQKAGLVAHAKRLLNELKQPD 506
Query: 375 NVSR---------------AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
NVSR A +F + G+ +S +++ + +FE
Sbjct: 507 NVSRETAITILARAGKVDEAMWVFRQAFDAGEVKDISVFGCIIDIFSRERKYAHVVEVFE 566
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV-PNKRFF 468
+G PDS+ L+ A+ K E L K+M + G V P++ F
Sbjct: 567 KMREVGHFPDSNVIALVLNAFGKLRKFERADALYKQMYEEGCVFPDEVHF 616
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 83/169 (49%), Gaps = 9/169 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS +I++ K G+ A LF ++R SG + D +Y +I A+ KA +A A
Sbjct: 444 YSTIISIWEKAGKLDRAAMLFHKLRTSGVKIDEILYQTMIVAY----QKAGLVAHAKRLL 499
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++K +P+ V+ + A+A VD+ +F++ ++ DI + ++D + +
Sbjct: 500 NELK-----QPDNVSRETAITILARAGKVDEAMWVFRQAFDAGEVKDISVFGCIIDIFSR 554
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+ V +M+ PD L+++++GK + F++ + ++K +
Sbjct: 555 ERKYAHVVEVFEKMREVGHFPDSNVIALVLNAFGKLRKFERADALYKQM 603
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 154/342 (45%), Gaps = 9/342 (2%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K Y+A T Y+ L+ V GK G A+ + EM + C PD YN L+ A++ +
Sbjct: 307 KSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYV----R 362
Query: 197 AKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
A + + M KG+ PN +TY ++ A +A D+ + F+++ ES P+
Sbjct: 363 AGFHEEGADFIDTMIRKGI---MPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPN 419
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
+ TYN ++ GK ++EM +L M+SN C P+ +T+N ++ G + + +VF+
Sbjct: 420 VCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFR 479
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
+ +P TFN++I YG+ Q ++++M +TP TY ++
Sbjct: 480 EMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRG 539
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
+ A + ++ G ++ + ML Y G + + E +N + P +
Sbjct: 540 DWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLR 599
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
L A K +++ + ++G P+ F L F+
Sbjct: 600 TLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFA 641
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 169/383 (44%), Gaps = 45/383 (11%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
GK+ K + L FR M K+ + + Y+ ++ ++GKK + + + +MR++GC P+
Sbjct: 396 GKAGKEDKALSFFRQM-KESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPN 454
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVD 237
+N ++ A + K + + F++MK G E PN T+N L+ A + +
Sbjct: 455 SVTWNTML-AMCGNKGMHKYVNRV---FREMKSCGFE---PNRDTFNALIGAYGRCGSQI 507
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
V +++E+ ++ P + TYN +++A + G + ESV+ MKS KP+ +++L++
Sbjct: 508 DVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLML 567
Query: 298 DSYGK-----------------------------------RQAFDKMEQVFKSLMHSKEK 322
+ Y K R+A ME+ F+ K
Sbjct: 568 NCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYK 627
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P L FNSM+ + K ++ +A + + + P +TY ++ MY + EI
Sbjct: 628 PDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEI 687
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+ K G + + N +++ +C GL EA G+ P TY Y+
Sbjct: 688 LKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSG 747
Query: 443 ANMKELVQKLLKRMEQNGIVPNK 465
M V++++ M Q+ PN+
Sbjct: 748 KGMFSEVEEVISYMIQHDCRPNE 770
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 148/329 (44%), Gaps = 16/329 (4%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
Y D ++ ++ + G+ A+ +F +MR +G P YN ++ + ++
Sbjct: 205 YSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVY---GKMGRSW 261
Query: 201 AKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
K LG +M+ G+E + T + ++ AC + +D+ F L +TY
Sbjct: 262 NKILGLLDEMRSNGLEF---DEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTY 318
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N ++ +GK G+ E S+L M+ N C PD++T+N L+ +Y + ++ +++
Sbjct: 319 NSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIR 378
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
P T+ ++I YGKA + KA F++M P+ TY I+ M G SR
Sbjct: 379 KGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLG---KKSR 435
Query: 379 AREIFDELSKL---GKDMKVSTLNAMLEAYCMN-GLPTEADLLFENSHNMGVTPDSSTYK 434
E+ D L + G T N ML A C N G+ + +F + G P+ T+
Sbjct: 436 LEEMIDMLCDMRSNGCAPNSVTWNTML-AMCGNKGMHKYVNRVFREMKSCGFEPNRDTFN 494
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVP 463
L AY + + V K+ + M + G P
Sbjct: 495 ALIGAYGRCGSQIDVVKMYEEMIKAGFTP 523
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 139/315 (44%), Gaps = 10/315 (3%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VFR M K + + ++ LI G+ G + ++ EM +G P + YNAL+ A
Sbjct: 477 VFREM-KSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNA- 534
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
L R +A A+++ K KG KPN +Y+++L A+ N + + +E++
Sbjct: 535 LARRGDWEA-AESVILDMKSKGF---KPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGH 590
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
+ P ++ A K + ME + KPD++ FN ++ + K + +D+
Sbjct: 591 IFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAH 650
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
++ + + S +P L T+NS++ Y + K E + + + P ++Y +I
Sbjct: 651 EMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIK-- 708
Query: 371 GYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
G+C + A E++ G + T N + Y G+ +E + + P
Sbjct: 709 GFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRP 768
Query: 429 DSSTYKLLYKAYTKA 443
+ TYK++ Y K
Sbjct: 769 NELTYKIVVDGYCKG 783
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 126/273 (46%), Gaps = 35/273 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK----- 202
Y+ L+ + ++G A + +M++ G +P+ + Y+ ++ + + + + K
Sbjct: 528 YNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGN-GRGIEKIEEEI 586
Query: 203 ---------------ALGYFQK--MKGMERC---------KPNIVTYNILLRACAQARNV 236
L F++ + GMER KP++V +N +L A+ +
Sbjct: 587 YNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMY 646
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
D+ + + + + ES L PD+ TYN +MD Y + G + E +L ++ + KPD++++N +
Sbjct: 647 DRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTV 706
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
I + ++ + + + S +P + T+N+ + Y + + E V M
Sbjct: 707 IKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDC 766
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
P+ +TY+ ++ GYC + +E D +S +
Sbjct: 767 RPNELTYKIVVD--GYCKG-KKYKEAMDFVSNI 796
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 108/247 (43%), Gaps = 1/247 (0%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM-IKEMESV 277
++ + +L A ++ ++ +F+++ ++ L+P + TYN ++D YGK G ++ +
Sbjct: 208 DVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGL 267
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L M+SN + D T + +I + G+ D+ + F L T+NS++ +GK
Sbjct: 268 LDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGK 327
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
A + +A + ++M P +TY ++ Y + D + + G T
Sbjct: 328 AGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAIT 387
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
++ AY G +A F G P+ TY + K + E + +L M
Sbjct: 388 YTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMR 447
Query: 458 QNGIVPN 464
NG PN
Sbjct: 448 SNGCAPN 454
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 104/224 (46%), Gaps = 1/224 (0%)
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
L E+ + D+ + ++ AY + G + ++ +M+ P ++T+N+++D YG
Sbjct: 196 LLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYG 255
Query: 302 KR-QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
K ++++K+ + + + + T +++I G+ L +A F ++ + Y
Sbjct: 256 KMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGT 315
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
TY ++ ++G S A I E+ K + T N ++ AY G E +
Sbjct: 316 FTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDT 375
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G+ P++ TY + AY KA ++ ++M+++G VPN
Sbjct: 376 MIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPN 419
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 91/187 (48%), Gaps = 5/187 (2%)
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
F E G +PD ++N++++ + ++K A + + G++ P++VTYN L+
Sbjct: 618 FQEFCKHGYKPDLVLFNSMLS--IFAKNKMYDRAHEMLRLIRESGLQ---PDLVTYNSLM 672
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
A+ + + K + +S PD+ +YN V+ + + G+++E LS M + +
Sbjct: 673 DMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIR 732
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P I+T+N + Y + F ++E+V ++ +P T+ ++ Y K + +A
Sbjct: 733 PCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDF 792
Query: 348 FQKMTAM 354
+T M
Sbjct: 793 VSNITEM 799
>gi|410110091|gb|AFV61125.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
micrantha]
Length = 406
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 138/287 (48%), Gaps = 7/287 (2%)
Query: 134 WMQK--QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
W+QK Q D +YS LI + K A+ +FS ++ SG PD YNA+I
Sbjct: 3 WLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVF- 61
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KAK +A +MK PN +Y+ LL + + + ++F E+ E
Sbjct: 62 ---GKAKLFREARSLISEMK-TAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKC 117
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
D+ T N ++D YG+ GM KE + + M+ +P+++++N L+ YG + F +
Sbjct: 118 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 177
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+F+ + + + T+NSMI+ YGK KA + Q+M + P+ ITY II+++G
Sbjct: 178 LFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWG 237
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+ RA +F +L G ++ M+ AY GL A L
Sbjct: 238 KVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLL 284
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 142/298 (47%), Gaps = 6/298 (2%)
Query: 166 WLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNI 225
WL +M D +Y+ LI D +KA++ F ++K P++V YN
Sbjct: 3 WL-QKMEQDQVPGDLVLYSNLIELSRKLCDYSKAIS----IFSRLK-RSGFTPDLVAYNA 56
Query: 226 LLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ 285
++ +A+ + +L E+ + + P+ +Y+ ++ Y +N E SV S M+ +
Sbjct: 57 MINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIK 116
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
C D+ T N++ID YG+ + +++F + +P + ++N+++ YG A L G+A
Sbjct: 117 CLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAI 176
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
++F+ M + +TY +I +YG +A + E+ G + T + ++ +
Sbjct: 177 HLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIW 236
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
G A +LF+ + GV D ++ + AY +A + ++LL +++ +P
Sbjct: 237 GKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIP 294
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 151/343 (44%), Gaps = 15/343 (4%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L SEM+ +G P+ + Y+ L+T ++
Sbjct: 43 KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVEN--- 99
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
K +AL F +M+ + +C ++ T NI++ Q + + LF + + + P++
Sbjct: 100 -KKFLEALSVFSEMREI-KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVV 157
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+YN ++ YG + E + M+ + +++T+N +I YGK +K + + +
Sbjct: 158 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEM 217
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P T++++I +GK +A +FQK+ + I ++ +I Y V
Sbjct: 218 QSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLV 277
Query: 377 SRAREIFDELSK---LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ A+ + EL + + +D + L G EA +F + + G D + +
Sbjct: 278 AHAKRLLHELKRPDNIPRDTAIHILAGA-------GRIEEATYVFRQAIDAGEAKDITVF 330
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+ + +K V ++ +M G P+ L +
Sbjct: 331 ERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLNAYG 373
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 127/265 (47%), Gaps = 1/265 (0%)
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L + QKM+ ++ ++V Y+ L+ + + + ++F L S PD+ YN +++
Sbjct: 1 LSWLQKME-QDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMIN 59
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+GK + +E S++S MK+ P+ +++ L+ Y + + F + VF + K
Sbjct: 60 VFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLL 119
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
L T N MI YG+ + +A+ +F M M P+ ++Y ++ +YG + A +F
Sbjct: 120 DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLF 179
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ + + V T N+M+ Y +A+ L + + G+ P+S TY + + K
Sbjct: 180 RLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKV 239
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFF 468
+ L +++ +G+ ++ F
Sbjct: 240 GKLDRAAMLFQKLRSSGVEIDQILF 264
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 129/301 (42%), Gaps = 37/301 (12%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
++ K+L+ L VF M++ + + D + +I V G+ G + A LF MR G P+
Sbjct: 98 ENKKFLEALSVFSEMREIKCLL-DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 156
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
YN L L A+ +A+ F+ M+ + + N+VTYN ++ + ++ N
Sbjct: 157 VSYNTL----LRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVTYNSMIMIYGKTLEHEKAN 211
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
L +E+ + P+ TY+ ++ +GK G + + +++S+ + D I F +I +Y
Sbjct: 212 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY 271
Query: 301 --------GKRQAFD--------------------KMEQ---VFKSLMHSKEKPTLPTFN 329
KR + ++E+ VF+ + + E + F
Sbjct: 272 ERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEAKDITVFE 331
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
MI K + VF KM + Y P ++ YG +A +++ E+ ++
Sbjct: 332 RMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQEV 391
Query: 390 G 390
G
Sbjct: 392 G 392
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 163/341 (47%), Gaps = 16/341 (4%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L + + M+K + AD IY+ +I + K A LF++M G RPD YN+LI+
Sbjct: 240 LSLLKKMEKGKIE-ADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLIS 298
Query: 189 AHLHT---RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
+ D ++ L+ + + PN+VT++ L+ A + + + L+ E
Sbjct: 299 CLCNYGRWSDASRLLSNMIE--------RKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ + + PDI+TY+ +++ + + + E + + M S C P+++T+N LI + K +
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
++ ++F+ + T+N++I +A A+ +F+KM + P ITY
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS- 469
Query: 366 IITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
I + G C + +A +F+ L K + + T N M+E C G + LF +
Sbjct: 470 -ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 528
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
GV P+ Y + + + +KE L + M+++G +P+
Sbjct: 529 KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPD 569
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 139/319 (43%), Gaps = 44/319 (13%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH-LHTR-DKAKALAKALG 205
+S LI K+G+ A L+ EM PD Y++LI +H R D+AK +
Sbjct: 328 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM----- 382
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
F+ M + C PN+VTYN L++ +A+ V++ LF+E+ + L + TYN ++
Sbjct: 383 -FELMISKD-CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ G + + +M S+ PDIIT+++L+D K +K VF+ L SK +P +
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+N MI KA GK E ++F
Sbjct: 501 YTYNIMIEGMCKA---GKVE--------------------------------DGWDLFCS 525
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
LS G V M+ +C GL EAD LF G PDS Y L +A +
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGD 585
Query: 446 KELVQKLLKRMEQNGIVPN 464
K +L+K M G V +
Sbjct: 586 KAASAELIKEMRSCGFVGD 604
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 153/325 (47%), Gaps = 7/325 (2%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
Y DT ++ LI + + A+ L +M GC+PD Y A++ D +
Sbjct: 181 YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGD----I 236
Query: 201 AKALGYFQKM-KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
AL +KM KG + + ++V YN ++ + +++D ALF ++ + PD++TYN
Sbjct: 237 DLALSLLKKMEKG--KIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYN 294
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
++ G + +LS M + P+++TF+ LID++ K + E+++ ++
Sbjct: 295 SLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
P + T++S+I + +A+++F+ M + P+ +TY +I + V
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
E+F E+S+ G T N +++ G A +F+ + GV PD TY +L
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 440 YTKANMKELVQKLLKRMEQNGIVPN 464
K E + + ++++ + P+
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPD 499
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 144/305 (47%), Gaps = 13/305 (4%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ L +M G +PD +N LI ++A+A Q+ C+P++VTY
Sbjct: 169 AVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQR-----GCQPDLVTY 223
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
++ + ++D +L K++ + + D+ YN ++D K I + ++ ++M++
Sbjct: 224 GAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMET 283
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+PD+ T+N LI + ++ +++ K P + TF+++I + K +
Sbjct: 284 KGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVE 343
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDM--KVSTLN 399
AE ++ +M P TY +I G+C D + A+ +F+ + + KD V T N
Sbjct: 344 AEKLYDEMIKRSIDPDIFTYSSLIN--GFCMHDRLDEAKHMFELM--ISKDCFPNVVTYN 399
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
+++ +C E LF G+ ++ TY L + +A ++ QK+ K+M +
Sbjct: 400 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD 459
Query: 460 GIVPN 464
G+ P+
Sbjct: 460 GVPPD 464
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 150/355 (42%), Gaps = 46/355 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++KL++ + K + L + L M+N D YN LI ALA LG
Sbjct: 83 FNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALA-VLGKM 141
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K+ G E P+IVT + LL ++ + AL ++ E PD T+N ++
Sbjct: 142 MKL-GYE---PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFL 197
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD-------KMEQ--------- 311
+ E +++ +M C+PD++T+ +++ KR D KME+
Sbjct: 198 HNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 312 -------------------VFKSLMHSKEKPTLPTFNSMI---INYGKARLQGKAEYVFQ 349
+F + +P + T+NS+I NYG+ A +
Sbjct: 258 YNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGR---WSDASRLLS 314
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
M K P+ +T+ +I + + A +++DE+ K D + T ++++ +CM+
Sbjct: 315 NMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA +FE + P+ TY L K + KA E +L + M Q G+V N
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 429
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 120/255 (47%), Gaps = 10/255 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + K K ++ +++ M K R D YS LI + A +F M +
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIK-RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQ 232
C P+ YN LI KAK + + + F++M +G+ N VTYN L++ Q
Sbjct: 390 DCFPNVVTYNTLIKGFC----KAKRVEEGMELFREMSQRGL---VGNTVTYNTLIQGLFQ 442
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
A + D +FK++ + PDI TY+ ++D K G +++ V ++ ++ +PDI T
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N++I+ K + +F SL KP + + +MI + + L+ +A+ +F++M
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 353 AMKYTPSFITYECII 367
P Y +I
Sbjct: 563 EDGTLPDSGCYNTLI 577
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 118/278 (42%), Gaps = 5/278 (1%)
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L A+G F +M R P+IV +N LL A A+ + D V +L + + ++ D+Y+YN
Sbjct: 61 LDDAIGLFGEMV-QSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
+++ + + + +VL +M +PDI+T + L++ Y + + ++
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVS 377
KP TFN++I +A + +M P +TY ++ G C ++
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVN--GLCKRGDID 237
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
A + ++ K + V N +++ C +A LF G+ PD TY L
Sbjct: 238 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLI 297
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+LL M + I PN F ++ F
Sbjct: 298 SCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAF 335
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 40/200 (20%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + K+ + + +E+FR M QR + +T Y+ LI + + G +A +F +M +
Sbjct: 401 LIKGFCKAKRVEEGMELFREMS-QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD 459
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQK-------------MKGM-------- 213
G PD Y+ L+ KAL Y QK ++GM
Sbjct: 460 GVPPDIITYSILLDGLCKYGKLEKALV-VFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Query: 214 ----------ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ KPN++ Y ++ + ++ +ALF+E+ E PD YN ++
Sbjct: 519 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIR 578
Query: 264 AYGKNG-------MIKEMES 276
A ++G +IKEM S
Sbjct: 579 ARLRDGDKAASAELIKEMRS 598
>gi|307103654|gb|EFN51912.1| hypothetical protein CHLNCDRAFT_59068 [Chlorella variabilis]
Length = 1025
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 170/380 (44%), Gaps = 11/380 (2%)
Query: 71 GRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLE 130
G E+ ++L+ V+ R + V+ + + + S L +EL KS + E
Sbjct: 117 GSAFSEMTVEDLLEVV-RRLPPEASAVKAIGQGLYYFDSGALAALLKELNKSGHVRRAQE 175
Query: 131 VFRWMQ-----KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
+F W++ + + +T Y+ +I+ G + Q R A+ L +EMR+ G + + Y+A
Sbjct: 176 LFDWLRGLDDSHDLYPLCNTMTYTTMISQCGTQQQLRRALELVAEMRSRGIQCNVHTYSA 235
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
L+ + K L AL +++M E C PN+VTYN L+ + ++ +
Sbjct: 236 LMNVCI----KGNELDLALDVYRQMLA-EGCTPNLVTYNTLIDVYGKTGAWEEAIRVLDA 290
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
L + P+I TYN V+ A +G +E + RM + +P T+ LI +YGK
Sbjct: 291 LERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLAAGAQPTATTYTALISAYGKNGQ 350
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
D+ Q+F+ ++ + + T++S+I KA A +F++M P+ +TY
Sbjct: 351 LDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELALELFREMHTEGCRPNVVTYNS 410
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+I +A+E+F+++ G T ++ AY G A FE
Sbjct: 411 LIAACAQGAQWEKAQEMFEQMQHRGCKPDAVTFGGLIAAYDRAGHWRRALTAFEQMKAHN 470
Query: 426 VTPDSSTYKLLYKAYTKANM 445
PDS Y + A K +
Sbjct: 471 CRPDSVVYNTIVGALWKTGL 490
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L GK+ + + L++F+ M + R + YS LI+ K G+ LA+ LF EM
Sbjct: 341 LISAYGKNGQLDRALQIFQDMVR-RGCERNVITYSSLISACEKAGRWELALELFREMHTE 399
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GCRP+ YN+LI A + KA F++M+ CKP+ VT+ L+ A +A
Sbjct: 400 GCRPNVVTYNSLIAACA----QGAQWEKAQEMFEQMQ-HRGCKPDAVTFGGLIAAYDRAG 454
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMI 271
+ + F+++ PD YN ++ A K G++
Sbjct: 455 HWRRALTAFEQMKAHNCRPDSVVYNTIVGALWKTGLV 491
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 6/111 (5%)
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
+TY +I+ G + RA E+ E+ G V T +A++ C+ G E DL +
Sbjct: 196 MTYTTMISQCGTQQQLRRALELVAEMRSRGIQCNVHTYSALMN-VCIKG--NELDLALDV 252
Query: 421 SHNM---GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
M G TP+ TY L Y K E ++L +E+ GI P R +
Sbjct: 253 YRQMLAEGCTPNLVTYNTLIDVYGKTGAWEEAIRVLDALERQGIDPEIRTY 303
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 162/344 (47%), Gaps = 14/344 (4%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
+LQ L F W + + Y+++I + GK LA L M++ G R S ++
Sbjct: 123 FLQSLAFFNWATTLEGFPSSPEPYNEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFS 182
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
L+ ++ +A A+A+ F +M+ CKP+ V+++I++ + + R + F
Sbjct: 183 VLVRRYV----RAGLAAEAVHAFNRMEDY-GCKPDKVSFSIVISSLCKKRRASEAELFFD 237
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
L PD+ Y ++ + + G I + E V S MK KP++ T++++IDS +
Sbjct: 238 SLKHK-FEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCG 296
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
+ VF ++ + P TFNS++ + KA K V+ +M + I+Y
Sbjct: 297 QITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYN 356
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML----EAYCMNGLPTEADLLFEN 420
+I + +N+ A ++ D + K G ST N++ E + +NG A ++
Sbjct: 357 FLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNG----AHRMYAK 412
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ P++ TY +L + + + ++V KL K M+++ + PN
Sbjct: 413 MKELKCMPNTLTYNILMRMFADSKSIDMVLKLKKEMDESEVEPN 456
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 125/268 (46%), Gaps = 3/268 (1%)
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
++L +F +E + YN ++ + R+ D L + + + T++ +
Sbjct: 125 QSLAFFNWATTLEGFPSSPEPYNEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFSVL 184
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ Y + G+ E +RM+ CKPD ++F+++I S K++ + E F SL H K
Sbjct: 185 VRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLKH-KF 243
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
+P + + S++ + +A KAE VF M P+ TY +I C ++RA +
Sbjct: 244 EPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHD 303
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+F E+ G D T N+++ + G + ++ +G D+ +Y L +++
Sbjct: 304 VFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHC 363
Query: 442 K-ANMKELVQKLLKRMEQNGIVPNKRFF 468
K N+ E V K+L M + G+ PN F
Sbjct: 364 KDENLDEAV-KVLDTMVKKGVAPNASTF 390
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/358 (19%), Positives = 152/358 (42%), Gaps = 58/358 (16%)
Query: 83 VRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELG-KSDKWLQCLEVFRWMQKQRW- 140
VR+ + +FS LVR + + H F E+ G K DK + + +K+R
Sbjct: 174 VRITVSTFS---VLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRAS 230
Query: 141 ------------YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
+ D +Y+ L+ + G A +FS+M+ +G +P+ Y+ +I
Sbjct: 231 EAELFFDSLKHKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVID 290
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
+ + + +A F +M C PN VT+N L+R +A ++V ++ ++
Sbjct: 291 SLC----RCGQITRAHDVFSEMID-AGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKR 345
Query: 249 SILAPDIYTYNGVMDAYGKN-----------------------------GMIKEMESV-- 277
A D +YN +++++ K+ G I E+ V
Sbjct: 346 LGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNG 405
Query: 278 ----LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
++MK +C P+ +T+N+L+ + ++ D + ++ K + S+ +P + T+ +I+
Sbjct: 406 AHRMYAKMKELKCMPNTLTYNILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILIL 465
Query: 334 NYGKARLQGKAEYVFQKMTAMK-YTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
+ + A + ++M K P+ YE ++ + + + E+ +++ G
Sbjct: 466 MFCEKGHWNNAYNLMKEMVEEKCLKPNLSIYETVLELLRNAGQLKKHEELVEKMVARG 523
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 102/213 (47%), Gaps = 10/213 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ L+ V K G+T + ++++M+ GC D YN LI +H K + L +A+
Sbjct: 320 FNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHC----KDENLDEAVKVL 375
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
M KG+ PN T+N + A+ +V+ + ++ ++ E P+ TYN +M +
Sbjct: 376 DTMVKKGV---APNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMF 432
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK-EKPT 324
+ I + + M ++ +P++ T+ +LI + ++ ++ + K ++ K KP
Sbjct: 433 ADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWNNAYNLMKEMVEEKCLKPN 492
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
L + +++ A K E + +KM A +
Sbjct: 493 LSIYETVLELLRNAGQLKKHEELVEKMVARGFV 525
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 182/400 (45%), Gaps = 34/400 (8%)
Query: 83 VRVLMRSFSDKEPLVRTLNKYVKVVRSEHCF--------LLFEELGKSDKWLQCLEVFRW 134
VR+LM E V+ + +++ + S++ F L +LGK D +++ R
Sbjct: 133 VRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDM----VDLARD 188
Query: 135 MQKQRWYIADTGI------YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
M + + ++GI ++ +I ++ KKG+ + A + S + P+ Y +LI
Sbjct: 189 MYIK---MLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLIL 245
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELH 247
H + L A F +M + C PN VTY+ L+ C++ R +++ + +E+
Sbjct: 246 GHCRNHN----LDLAFAMFDRMVK-DGCDPNSVTYSTLINGLCSEGR-LEEAMDMLEEMV 299
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
+ + P +YTY + + G E +L +MK C P+I TF LI + F+
Sbjct: 300 QKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFE 359
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE---YVFQKMTAMKYTPSFITYE 364
++ ++ PT T+N++I + ++G+ E +F+ M + PS TY
Sbjct: 360 IAIGLYHKMLADGLVPTTVTYNALI---NQLCVEGRFETAFTIFKWMLSHGSLPSTQTYN 416
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
II + ++ +A IFD++ K G V T N ++ YC G A L E
Sbjct: 417 EIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGN 476
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G+ PD+ TY L +++ E L M ++GI PN
Sbjct: 477 GLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPN 516
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 139/330 (42%), Gaps = 7/330 (2%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+R + + ++ LI+ + + G+ +A+ L+ +M G P YNALI L +
Sbjct: 334 KKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALIN-QLCVEGR 392
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+ A F+ M P+ TYN +++ ++ + +F ++ ++ +P++
Sbjct: 393 FET---AFTIFKWMLS-HGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVI 448
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TYN ++ Y K G + +L MK N KPD T+ LI + + + +F +
Sbjct: 449 TYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGM 508
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
M P T+ ++I Y A +F KM PS TY +I+ + +++
Sbjct: 509 MEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSI 568
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
S A ++ K G V T + ++ C NG A +F P+ TY L
Sbjct: 569 SEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSL 628
Query: 437 YKAYTKANMKELVQ--KLLKRMEQNGIVPN 464
+ E + LL R+ G PN
Sbjct: 629 IYGLCQEGRAEDAEMYNLLARLTHYGCEPN 658
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 152/382 (39%), Gaps = 49/382 (12%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L +L ++ +F+WM + T Y+++I G + AM +F +M +
Sbjct: 383 LINQLCVEGRFETAFTIFKWMLSHG-SLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKA 441
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P+ YN LI + K L A+ + MKG KP+ TY L+ ++
Sbjct: 442 GSSPNVITYNTLIYGYC----KQGNLNNAMRLLEIMKG-NGLKPDAWTYTELISGFSRGG 496
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
++ +LF + E ++P+ TY ++D Y + + ++ +M + P T+N
Sbjct: 497 KLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYN 556
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++I + K + + E ++ P + T+ S I + G A +F +M
Sbjct: 557 VMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKR 616
Query: 355 KYTPSFITYECIITMYGYC-DNVSRAREIFDELSKL---GKDMKVSTLN----------- 399
Y P+ TY +I YG C + + E+++ L++L G + V T
Sbjct: 617 NYFPNLYTYSSLI--YGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGR 674
Query: 400 ------------------------AMLEAYCMNGLPTEADL-LFENSHNMGVTPDSSTYK 434
A+L C N L E+ L +F + +G S YK
Sbjct: 675 CYEADQLVVSMQKKGLQPSEEIYRALLIGECKN-LKVESALNIFYSMDTLGFQLHLSDYK 733
Query: 435 LLYKAYTKANMKELVQKLLKRM 456
L A K N E Q + + M
Sbjct: 734 ALICALCKENFIEEAQCIFQTM 755
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 114/250 (45%), Gaps = 20/250 (8%)
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD----IITFN 294
V+ L + + + + AP + ++ + G +K + LS + S K D + +F
Sbjct: 115 VSMLNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINS---KYDFGYTLCSFT 171
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI-INYGKARLQGKAEYVFQKMTA 353
L+ GK D ++ +++S +P+L TFN+MI I K R+Q +A+ + +
Sbjct: 172 TLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQ-EAKLIMSHIFR 230
Query: 354 MKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P+ TY +I G+C N+ A +FD + K G D T + ++ C G
Sbjct: 231 YDAYPNAFTYTSLIL--GHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
EA + E G+ P TY + + A +LL +M++ G VPN
Sbjct: 289 EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPN------- 341
Query: 472 LETFSSSLAG 481
++TF++ ++G
Sbjct: 342 IQTFTALISG 351
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 159/360 (44%), Gaps = 24/360 (6%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + L K + + L + M+ Q+ DT Y+ LI K G+ LF EM
Sbjct: 389 LIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKE 448
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYF--QKMKGMERCKPNIVTYNILLRACAQ 232
G P+ N L+ T ++ A+ +F + +GM K + VTY L+ A
Sbjct: 449 GVAPNVVTVNTLVGGMCRT----GRVSSAVNFFVEAQRRGM---KGDAVTYTALINAFCN 501
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
N ++ LF E+ +S +PD Y ++ + + G + + VL+ +K +PD +
Sbjct: 502 VNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVC 561
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N LI + + F ++ ++ K + + KP T+N++I K A+ V +KM
Sbjct: 562 YNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMI 621
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST--------LNAMLEA 404
P+ TY +I Y N + A EIF KDMK ++ N ++ +
Sbjct: 622 KAGVVPTVATYGAVINAYCLNGNGNEAMEIF-------KDMKAASKVPPNTVIYNILINS 674
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
C N A L E+ GVTP+++TY ++K E V + + RM ++ P+
Sbjct: 675 LCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPD 734
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 140/324 (43%), Gaps = 9/324 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS-GCRPDPSVYNALITAHLHTRDKAKALAK 202
D IY+ LI + K G+ + + L MR+ GC PD YN LI KA + K
Sbjct: 382 DVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFC----KAGEIEK 437
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
F +M E PN+VT N L+ + V F E + D TY ++
Sbjct: 438 GKELFDEMNK-EGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALI 496
Query: 263 DAY-GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+A+ N K ME + + M + C PD I + LI + + V L
Sbjct: 497 NAFCNVNNFEKAME-LFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGI 555
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
+P +N++I + + + + ++M P ITY +I ++ A++
Sbjct: 556 RPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQK 615
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG-VTPDSSTYKLLYKAY 440
+ ++ K G V+T A++ AYC+NG EA +F++ V P++ Y +L +
Sbjct: 616 VMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSL 675
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
K N + L++ M+ G+ PN
Sbjct: 676 CKNNKVKSAVSLMEDMKIWGVTPN 699
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 153/352 (43%), Gaps = 16/352 (4%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEM----RNSGCRPDPSVYNALITAHLHTRDKA 197
+ +T + + ++++ + G+ + A+ + EM +S CRP+ + + L + L
Sbjct: 187 VKNTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNE 246
Query: 198 KALAK--ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
+ L++ + K + ++ R C + R ++ LF E+ + +
Sbjct: 247 ELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLC-RNRKTNRGWDLFTEMIKLGAVLES 305
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
N ++ + G M ++ +M +P+++TF +LI+ K + D +V +
Sbjct: 306 AACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEK 365
Query: 316 LMHSKE--------KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK-YTPSFITYECI 366
+ KE +P + +N++I K Q + + ++M + K P ITY C+
Sbjct: 366 MSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCL 425
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I + + + +E+FDE++K G V T+N ++ C G + A F + G+
Sbjct: 426 IDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGM 485
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
D+ TY L A+ N E +L M ++G P+ + + FS +
Sbjct: 486 KGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQA 537
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 112/246 (45%), Gaps = 17/246 (6%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ +E+F M K D +Y LI+ + G+ A ++ +E++ G RPD YN L
Sbjct: 507 KAMELFNEMLKSGCS-PDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTL 565
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERC--KPNIVTYNILLRACAQARNVDQVNALFK 244
I T + F+ +K ME KP+ +TYN L+ ++ ++ + +
Sbjct: 566 IGGFCRTNKFHRV-------FEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMR 618
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS-NQCKPDIITFNLLIDSYGKR 303
++ ++ + P + TY V++AY NG E + MK+ ++ P+ + +N+LI+S K
Sbjct: 619 KMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKN 678
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM---KYTPSF 360
+ + + P T+N++ + R + E VF+ M M P +
Sbjct: 679 NKVKSAVSLMEDMKIWGVTPNTTTYNAI---FKGLRDEKDLEKVFEFMDRMIEHACNPDY 735
Query: 361 ITYECI 366
IT E +
Sbjct: 736 ITMEIL 741
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 5/178 (2%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
+++K+ + E+ + M++ DT Y+ LIA K G + A + +M +G P
Sbjct: 571 RTNKFHRVFEMLKEMEEAGLK-PDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTV 629
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
+ Y A+I A+ + +A+ F+ MK + PN V YNIL+ + + V
Sbjct: 630 ATYGAVINAYCLNGNGNEAME----IFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAV 685
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+L +++ + P+ TYN + ++++ + RM + C PD IT +L +
Sbjct: 686 SLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTE 743
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 154/342 (45%), Gaps = 9/342 (2%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K Y+A T Y+ L+ V GK G A+ + EM + C PD YN L+ A++ +
Sbjct: 307 KSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYV----R 362
Query: 197 AKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
A + + M KG+ PN +TY ++ A +A D+ + F+++ ES P+
Sbjct: 363 AGFHEEGADFIDTMIRKGI---MPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPN 419
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
+ TYN ++ GK ++EM +L M+SN C P+ +T+N ++ G + + +VF+
Sbjct: 420 VCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFR 479
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
+ +P TFN++I YG+ Q ++++M +TP TY ++
Sbjct: 480 EMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRG 539
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
+ A + ++ G ++ + ML Y G + + E +N + P +
Sbjct: 540 DWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLR 599
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
L A K +++ + ++G P+ F L F+
Sbjct: 600 TLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFA 641
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 169/383 (44%), Gaps = 45/383 (11%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
GK+ K + L FR M K+ + + Y+ ++ ++GKK + + + +MR++GC P+
Sbjct: 396 GKAGKEDKALSFFRQM-KESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPN 454
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVD 237
+N ++ A + K + + F++MK G E PN T+N L+ A + +
Sbjct: 455 SVTWNTML-AMCGNKGMHKYVNRV---FREMKSCGFE---PNRDTFNALIGAYGRCGSQI 507
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
V +++E+ ++ P + TYN +++A + G + ESV+ MKS KP+ +++L++
Sbjct: 508 DVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLML 567
Query: 298 DSYGK-----------------------------------RQAFDKMEQVFKSLMHSKEK 322
+ Y K R+A ME+ F+ K
Sbjct: 568 NCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYK 627
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P L FNSM+ + K ++ +A + + + P +TY ++ MY + EI
Sbjct: 628 PDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEI 687
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+ K G + + N +++ +C GL EA G+ P TY Y+
Sbjct: 688 LKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSG 747
Query: 443 ANMKELVQKLLKRMEQNGIVPNK 465
M V++++ M Q+ PN+
Sbjct: 748 KGMFSEVEEVISYMIQHDCRPNE 770
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 148/329 (44%), Gaps = 16/329 (4%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
Y D ++ ++ + G+ A+ +F +MR +G P YN ++ + ++
Sbjct: 205 YSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVY---GKMGRSW 261
Query: 201 AKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
K LG +M+ G+E + T + ++ AC + +D+ F L +TY
Sbjct: 262 NKILGLLDEMRSNGLEF---DEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTY 318
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N ++ +GK G+ E S+L M+ N C PD++T+N L+ +Y + ++ +++
Sbjct: 319 NSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIR 378
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
P T+ ++I YGKA + KA F++M P+ TY I+ M G SR
Sbjct: 379 KGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLG---KKSR 435
Query: 379 AREIFDELSKL---GKDMKVSTLNAMLEAYCMN-GLPTEADLLFENSHNMGVTPDSSTYK 434
E+ D L + G T N ML A C N G+ + +F + G P+ T+
Sbjct: 436 LEEMIDMLCDMRSNGCAPNSVTWNTML-AMCGNKGMHKYVNRVFREMKSCGFEPNRDTFN 494
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVP 463
L AY + + V K+ + M + G P
Sbjct: 495 ALIGAYGRCGSQIDVVKMYEEMIKAGFTP 523
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 139/315 (44%), Gaps = 10/315 (3%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VFR M K + + ++ LI G+ G + ++ EM +G P + YNAL+ A
Sbjct: 477 VFREM-KSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNA- 534
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
L R +A A+++ K KG KPN +Y+++L A+ N + + +E++
Sbjct: 535 LARRGDWEA-AESVILDMKSKGF---KPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGH 590
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
+ P ++ A K + ME + KPD++ FN ++ + K + +D+
Sbjct: 591 IFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAH 650
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
++ + + S +P L T+NS++ Y + K E + + + P ++Y +I
Sbjct: 651 EMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIK-- 708
Query: 371 GYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
G+C + A E++ G + T N + Y G+ +E + + P
Sbjct: 709 GFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRP 768
Query: 429 DSSTYKLLYKAYTKA 443
+ TYK++ Y K
Sbjct: 769 NELTYKIVVDGYCKG 783
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 126/273 (46%), Gaps = 35/273 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK----- 202
Y+ L+ + ++G A + +M++ G +P+ + Y+ ++ + + + + K
Sbjct: 528 YNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGN-GRGIEKIEEEI 586
Query: 203 ---------------ALGYFQK--MKGMERC---------KPNIVTYNILLRACAQARNV 236
L F++ + GMER KP++V +N +L A+ +
Sbjct: 587 YNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMY 646
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
D+ + + + + ES L PD+ TYN +MD Y + G + E +L ++ + KPD++++N +
Sbjct: 647 DRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTV 706
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
I + ++ + + + S +P + T+N+ + Y + + E V M
Sbjct: 707 IKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDC 766
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
P+ +TY+ ++ GYC + +E D +S +
Sbjct: 767 RPNELTYKIVVD--GYCKG-KKYKEAMDFVSNI 796
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 108/247 (43%), Gaps = 1/247 (0%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM-IKEMESV 277
++ + +L A ++ ++ +F+++ ++ L+P + TYN ++D YGK G ++ +
Sbjct: 208 DVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGL 267
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L M+SN + D T + +I + G+ D+ + F L T+NS++ +GK
Sbjct: 268 LDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGK 327
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
A + +A + ++M P +TY ++ Y + D + + G T
Sbjct: 328 AGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAIT 387
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
++ AY G +A F G P+ TY + K + E + +L M
Sbjct: 388 YTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMR 447
Query: 458 QNGIVPN 464
NG PN
Sbjct: 448 SNGCAPN 454
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 104/224 (46%), Gaps = 1/224 (0%)
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
L E+ + D+ + ++ AY + G + ++ +M+ P ++T+N+++D YG
Sbjct: 196 LLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYG 255
Query: 302 KR-QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
K ++++K+ + + + + T +++I G+ L +A F ++ + Y
Sbjct: 256 KMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGT 315
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
TY ++ ++G S A I E+ K + T N ++ AY G E +
Sbjct: 316 FTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDT 375
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G+ P++ TY + AY KA ++ ++M+++G VPN
Sbjct: 376 MIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPN 419
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 91/187 (48%), Gaps = 5/187 (2%)
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
F E G +PD ++N++++ + ++K A + + G++ P++VTYN L+
Sbjct: 618 FQEFCKHGYKPDLVLFNSMLS--IFAKNKMYDRAHEMLRLIRESGLQ---PDLVTYNSLM 672
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
A+ + + K + +S PD+ +YN V+ + + G+++E LS M + +
Sbjct: 673 DMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIR 732
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P I+T+N + Y + F ++E+V ++ +P T+ ++ Y K + +A
Sbjct: 733 PCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAMDF 792
Query: 348 FQKMTAM 354
+T M
Sbjct: 793 VSNITEM 799
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 162/365 (44%), Gaps = 12/365 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ L S K Q +EV M ++ Y D Y+ LI + AM L EMR+
Sbjct: 210 ILRSLCDSGKLKQAMEVLDRMLQRDCY-PDVITYTILIEATCRDSGVGQAMKLLDEMRDR 268
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQA 233
GC PD YN L+ K L +A+ + M C+PN++T+NI+LR+ C+
Sbjct: 269 GCTPDVVTYNVLVNGIC----KEGRLDEAIKFLNDMPS-SGCQPNVITHNIILRSMCSTG 323
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
R +D L ++ +P + T+N +++ + G++ +L +M + C+P+ +++
Sbjct: 324 RWMD-AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSY 382
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N L+ + K + D+ + + ++ P + T+N+M+ K A + ++++
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL--NAMLEAYCMNGLP 411
+P ITY +I +A ++ DE+ KD+K T+ ++++ G
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR--AKDLKPDTITYSSLVGGLSREGKV 500
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
EA F MGV P++ T+ + K + L M G P + +
Sbjct: 501 DEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTIL 560
Query: 472 LETFS 476
+E +
Sbjct: 561 IEGLA 565
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 169/378 (44%), Gaps = 26/378 (6%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
F +GK+ K + LEV + + D Y+ +I+ K G+ A+ + M S
Sbjct: 147 FCRMGKTRKAAKILEVL----EGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS- 201
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQAR 234
PD YN ++ + D K L +A+ +M ++R C P+++TY IL+ A +
Sbjct: 202 --PDVVTYNTILRSLC---DSGK-LKQAMEVLDRM--LQRDCYPDVITYTILIEATCRDS 253
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
V Q L E+ + PD+ TYN +++ K G + E L+ M S+ C+P++IT N
Sbjct: 254 GVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN 313
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+++ S + E++ ++ P++ TFN +I + L G+A + +KM
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKH 373
Query: 355 KYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
P+ ++Y + ++G+C + RA E + + G + T N ML A C +G
Sbjct: 374 GCQPNSLSYNPL--LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
+A + + G +P TY + KA KLL M + P+ +
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY---- 487
Query: 473 ETFSSSLAGSQSGSAKTD 490
SSL G S K D
Sbjct: 488 ----SSLVGGLSREGKVD 501
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 140/325 (43%), Gaps = 5/325 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ ++ + G+ + AM + M C PD Y LI A RD + +A
Sbjct: 203 DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEAT--CRDSG--VGQA 258
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ +M+ C P++VTYN+L+ + +D+ ++ S P++ T+N ++
Sbjct: 259 MKLLDEMRD-RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ G + E +L+ M P ++TFN+LI+ ++ + + + + +P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQP 377
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
++N ++ + K + +A ++M + P +TY ++T V A EI
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
++LS G + T N +++ G +A L + + PD+ TY L ++
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFF 468
+ K E+ G+ PN F
Sbjct: 498 GKVDEAIKFFHEFERMGVRPNAVTF 522
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 164/392 (41%), Gaps = 43/392 (10%)
Query: 86 LMRSFSDKEPLVRTLNKYVKVVRSEHCF-------LLFEELGKSDKWLQCLEVFRWMQKQ 138
++RS D L + + ++++ + C+ +L E + Q +++ M +
Sbjct: 210 ILRSLCDSGKLKQAMEVLDRMLQRD-CYPDVITYTILIEATCRDSGVGQAMKLLDEM-RD 267
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT---RD 195
R D Y+ L+ + K+G+ A+ ++M +SGC+P+ +N ++ + T D
Sbjct: 268 RGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327
Query: 196 KAKALAKAL--GY------------FQKMKGM-------------ERCKPNIVTYNILLR 228
K LA L G+ F KG+ C+PN ++YN LL
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLH 387
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
+ + +D+ + + PDI TYN ++ A K+G +++ +L+++ S C P
Sbjct: 388 GFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
+IT+N +ID K K ++ + KP T++S++ + +A F
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507
Query: 349 QKMTAMKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+ M P+ +T+ I M G C RA + + G ++ ++E
Sbjct: 508 HEFERMGVRPNAVTFNSI--MLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLA 565
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
G+ EA L N G+ SS ++ K
Sbjct: 566 YEGMAKEALELLNELCNKGLMKRSSAEQVAGK 597
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 110/260 (42%), Gaps = 7/260 (2%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+I+ L+R + + + + L S PD+ TYN ++ Y K G I SV
Sbjct: 135 PDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L RM + PD++T+N ++ S + +V ++ P + T+ +I +
Sbjct: 195 LDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKV 395
G+A + +M TP +TY ++ G C + A + +++ G V
Sbjct: 252 DSGVGQAMKLLDEMRDRGCTPDVVTYNVLVN--GICKEGRLDEAIKFLNDMPSSGCQPNV 309
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
T N +L + C G +A+ L + G +P T+ +L + + +L++
Sbjct: 310 ITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEK 369
Query: 456 MEQNGIVPNKRFFLEALETF 475
M ++G PN + L F
Sbjct: 370 MPKHGCQPNSLSYNPLLHGF 389
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 148/323 (45%), Gaps = 11/323 (3%)
Query: 156 GKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGM 213
G++ Q + +WL +M G + + NALI H + K + A + M KGM
Sbjct: 455 GRRHQEAVGIWL--KMLEKGLCINIATSNALI----HGLCEGKNMKGATEVLRTMVNKGM 508
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
E + +TYNI+++ C + +++ L ++ PD Y +N ++ AY G ++E
Sbjct: 509 EL---DNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEE 565
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
+L +MK +PD++++ +ID Y K + K + LM KP +N++I
Sbjct: 566 ALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIG 625
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
YG+ A V M ++ P+ +TY ++ + V A+ +F++ K ++
Sbjct: 626 GYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEV 685
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
V M++ C G EA FE + + P+ TY L AY K+ E KL
Sbjct: 686 GVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLF 745
Query: 454 KRMEQNGIVPNKRFFLEALETFS 476
M +GIVP+ + + FS
Sbjct: 746 DEMVSSGIVPDNVSYNTLVTGFS 768
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 110/252 (43%), Gaps = 5/252 (1%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
++ + D +++ +I G+ A+ L +M+ G +PD Y +I + KA
Sbjct: 540 RKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYC----KA 595
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
K + KA Y ++ KPN V YN L+ + N+ + + + P T
Sbjct: 596 KDIQKANEYLNELMACG-LKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVT 654
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y +M G++ E +++ + + N + ++ + ++I K D+ F+ +
Sbjct: 655 YCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMR 714
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
P T+ +++ Y K+ +A +F +M + P ++Y ++T + D++
Sbjct: 715 SRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLD 774
Query: 378 RAREIFDELSKL 389
+A E E+S +
Sbjct: 775 KAIEKAAEISSI 786
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 161/396 (40%), Gaps = 53/396 (13%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM 171
C L E L ++ +VF M+ + + Y+ +I + K G+ + S++
Sbjct: 196 CNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDL 255
Query: 172 RNSGCRPDPSV--YNALITAHLHTRDKAKALAKALGYFQKMKG-ME--RCKPNIVTYNIL 226
++G + YN L+ A + +A+ ++KG ME R P++VT+ IL
Sbjct: 256 IHAGLQQSAGAVPYNLLMDALCKSGRVDEAI--------RLKGRMEESRVAPSMVTFGIL 307
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+ ++ +V AL +E+ + P+ N ++D + + G E + M S +
Sbjct: 308 INGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEM 367
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
K +T+NL+ + K ++ E++ + ++ + FNS++ G + G+ E
Sbjct: 368 KSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVV--AGLLQRTGRLES 425
Query: 347 VFQKMT-----AMKYTPSFITY-------------------------ECI------ITMY 370
V + ++ MK + +T CI ++
Sbjct: 426 VVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIH 485
Query: 371 GYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
G C+ N+ A E+ + G ++ T N M++ C + EA L ++ G P
Sbjct: 486 GLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKP 545
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
D+ + + AY E LL +M+ G+ P+
Sbjct: 546 DAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPD 581
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 149/322 (46%), Gaps = 15/322 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + K G +R A+ L M C P+ YN +I K + + +AL F
Sbjct: 182 YGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLF----KDRQVNEALNIF 237
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M KG+ PN+ TYN ++ + V L E+ +S + P++ + ++DA
Sbjct: 238 SEMIAKGI---SPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDAL 294
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K GM+ V+ M +PD++T+ L+D + R D+ ++VF +++ P +
Sbjct: 295 CKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNV 354
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE---I 382
+++++I Y K + KA Y+F++M + P+ +TY +I +G C +V R R+ +
Sbjct: 355 ISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLI--HGLC-HVGRLRDAIAL 411
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
F E+ G+ + T +L+ C +A + + + PD +Y ++ +
Sbjct: 412 FHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCR 471
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
E L + G+ P+
Sbjct: 472 VGELEAAGDLFSSLSSKGLHPD 493
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 118/273 (43%), Gaps = 5/273 (1%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
QR D Y+ L+ + + A +F M GC P+ Y+ LI + K
Sbjct: 312 QRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYC----KI 367
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+ + KA+ F++M E PNIVTYN L+ + ALF E+ S PD+ T
Sbjct: 368 QRIDKAMYLFEEMCQRELV-PNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVT 426
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y ++D K + + ++L ++ + PDI ++N++ID + + +F SL
Sbjct: 427 YRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLS 486
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
P + T+ MI L +A +F++M +P TY I + +
Sbjct: 487 SKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETL 546
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
A ++ E+ G ST+ ++E +GL
Sbjct: 547 SAIQLLQEMLGRGFSADASTITLIVEMLSDDGL 579
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 26/199 (13%)
Query: 100 LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG 159
+N Y K+ R + LFEE+ C QR + + Y+ LI + G
Sbjct: 361 INGYCKIQRIDKAMYLFEEM--------C---------QRELVPNIVTYNTLIHGLCHVG 403
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALGYFQKMKGMERCK 217
+ R A+ LF EM SG PD Y L+ TR D+A A+ KA+ +G
Sbjct: 404 RLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAI------EG-SNLA 456
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+I +YNI++ + ++ LF L L PD++TY +++ G++ E +
Sbjct: 457 PDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKL 516
Query: 278 LSRMKSNQCKPDIITFNLL 296
M ++ C PD T+NL+
Sbjct: 517 FREMNTDGCSPDDCTYNLI 535
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 109/265 (41%), Gaps = 1/265 (0%)
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
+ +AL F +M M+ P++V + +L + A ++ V +L K++ + D+YT
Sbjct: 55 IDEALSSFNRMLHMQP-PPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLA 113
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
V++++ + SVL+++ +PD TF LI + +F ++
Sbjct: 114 IVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGE 173
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
+P T+ ++I K A + + M P+ ITY II V+ A
Sbjct: 174 GFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEA 233
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
IF E+ G VST N+++ C L + + P+ + L A
Sbjct: 234 LNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDA 293
Query: 440 YTKANMKELVQKLLKRMEQNGIVPN 464
K M + ++ M Q G+ P+
Sbjct: 294 LCKEGMVTIAHDVVDVMIQRGVEPD 318
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 7/203 (3%)
Query: 271 IKEMESVLS---RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+K +VLS +M S D+ T ++I+S+ D V + +P T
Sbjct: 87 MKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTAT 146
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDE 385
F ++I G+A ++F KM + P+ +TY +I +G C N A +
Sbjct: 147 FTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLI--HGLCKVGNSRAAIRLLRS 204
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ + + V T N +++ + EA +F G++P+ STY + K +
Sbjct: 205 MVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSE 264
Query: 446 KELVQKLLKRMEQNGIVPNKRFF 468
+ V L+ M + I+PN F
Sbjct: 265 WKHVATLMNEMVDSKIMPNVVIF 287
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 72/197 (36%), Gaps = 13/197 (6%)
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
D+ F ++H + P++ F ++ + + + ++M ++ T
Sbjct: 55 IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+I + + + V + ++ KLG +T ++ C+ G EA LF+ G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN-------------KRFFLEAL 472
P+ TY L K +LL+ M Q PN R EAL
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234
Query: 473 ETFSSSLAGSQSGSAKT 489
FS +A S + T
Sbjct: 235 NIFSEMIAKGISPNVST 251
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 162/368 (44%), Gaps = 47/368 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS +I V K G + + ++ +M + PD + +N LI + L D+ + G
Sbjct: 68 YSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDS-LAKADQVEEACNVFGDM 126
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K+ P++ TY IL+R+ +D V LF+ + P+++TY+ VM A+G
Sbjct: 127 FKLN----VSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGS 182
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + E + +M +PD +T+N+LID++GK ++E+ F + S+ T
Sbjct: 183 AGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKT---GQLERAFDFVGKSRSFTNEVT 239
Query: 328 FNSMIINYG-KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF--- 383
+NS++ + G K +QG E +F +M A + +TY +I G+ V +++
Sbjct: 240 YNSLLSSLGRKGDIQGLME-LFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEM 298
Query: 384 ----------------DELSKLGK---------DMKVSTLNAMLEAY--CMNGL------ 410
D LSK G+ DMK LNA Y +NGL
Sbjct: 299 VDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKL 358
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
LL E N G P+ TY L +Y K + +L M++ G+ PN +
Sbjct: 359 DAAGALLLEMEEN-GCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSS 417
Query: 471 ALETFSSS 478
+E F +
Sbjct: 418 LIEGFGKA 425
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 161/356 (45%), Gaps = 19/356 (5%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K+D+ + VF M K D Y+ LI +G G+ M LF M
Sbjct: 105 ILIDSLAKADQVEEACNVFGDMFKLN-VSPDVYTYTILIRSLGTIGRIDAVMKLFESMTA 163
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACA 231
GC+P+ Y+++ +H A + +A FQ+M KG++ P+ VTYNIL+ A
Sbjct: 164 QGCQPNLFTYHSV----MHAFGSAGRVDEACDIFQQMVQKGLQ---PDAVTYNILIDAFG 216
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ Q+ F + +S + TYN ++ + G+ G I+ + + +MK+ + +
Sbjct: 217 K---TGQLERAFDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNEL 273
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
T+ +LI+ G + + Q++ ++ + K + T N+++ KA G+ E F+
Sbjct: 274 TYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKA---GRVEAAFELF 330
Query: 352 TAMKY---TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
MK+ +TY +I G + A + E+ + G + T N ++ +Y
Sbjct: 331 QDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKW 390
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ A LF GV P+ +Y L + + KA + L + M+ G PN
Sbjct: 391 SNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPN 446
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 133/313 (42%), Gaps = 8/313 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y ++ G G+ A +F +M G +PD YN LI A K L +A +
Sbjct: 173 YHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAF----GKTGQLERAFDFV 228
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
G R N VTYN LL + + ++ + LF ++ L + TY +++ G
Sbjct: 229 ----GKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGW 284
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G ++++ + M N K DI+T N ++D K + ++F+ + T
Sbjct: 285 AGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVT 344
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N +I G+A A + +M P+ ITY +I+ YG N+S A +F E+
Sbjct: 345 YNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMK 404
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ G V + ++++E + G A LF G P+ TY LL +A
Sbjct: 405 ERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFG 464
Query: 448 LVQKLLKRMEQNG 460
+ L+ M G
Sbjct: 465 AAMEYLREMRDAG 477
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 137/282 (48%), Gaps = 13/282 (4%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + GK+ Q F ++ K R + + Y+ L++ +G+KG + M LF +M+
Sbjct: 210 ILIDAFGKTG---QLERAFDFVGKSRSFTNEV-TYNSLLSSLGRKGDIQGLMELFGQMKA 265
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G + Y A++ L + + + + Y + + K +IVT N +L ++A
Sbjct: 266 KGLVSNELTY-AILIERLGWAGRVEDVWQL--YLEMVD--NDIKYDIVTINNVLDCLSKA 320
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
V+ LF+++ L D TYN +++ G+ G + ++L M+ N C P+IIT+
Sbjct: 321 GRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITY 380
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N LI SYGK ++F + P + +++S+I +GKA A +F++M A
Sbjct: 381 NTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKA 440
Query: 354 MKYTPSFITY----ECIITMYGYCDNVSRAREIFDELSKLGK 391
P+ +TY +C+I + + RE+ D ++GK
Sbjct: 441 EGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGK 482
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 130/295 (44%), Gaps = 8/295 (2%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
L M+ + D ++N LI + KAL + L F K G +P TY+ +
Sbjct: 17 LVESMQKDRTKLDTQLFNTLIHIYGEANMMEKAL-QTLAAFTKEGG----RPTAYTYSSM 71
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
++ + +V ++K++ ++ PD T+N ++D+ K ++E +V M
Sbjct: 72 IQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNV 131
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
PD+ T+ +LI S G D + ++F+S+ +P L T++S++ +G A +A
Sbjct: 132 SPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACD 191
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+FQ+M P +TY +I +G + RA FD + K T N++L +
Sbjct: 192 IFQQMVQKGLQPDAVTYNILIDAFGKTGQLERA---FDFVGKSRSFTNEVTYNSLLSSLG 248
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
G LF G+ + TY +L + A E V +L M N I
Sbjct: 249 RKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDI 303
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 97/222 (43%)
Query: 226 LLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ 285
+L AR D V L + + + D +N ++ YG+ M+++ L+
Sbjct: 1 MLTLLGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEG 60
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
+P T++ +I + K ++K ++ +K P TFN +I + KA +A
Sbjct: 61 GRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEAC 120
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
VF M + +P TY +I G + ++F+ ++ G + T ++++ A+
Sbjct: 121 NVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAF 180
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G EA +F+ G+ PD+ TY +L A+ K E
Sbjct: 181 GSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLE 222
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 88/180 (48%), Gaps = 8/180 (4%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L K+ + E+F+ M K + ADT Y+ LI +G+ G+ A L EM +GC P
Sbjct: 317 LSKAGRVEAAFELFQDM-KFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAP 375
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVD 237
+ YN LI+++ K L+ A F +MK ER PN+V+Y+ L+ +A D
Sbjct: 376 NIITYNTLISSY----GKWSNLSAATRLFLEMK--ERGVAPNVVSYSSLIEGFGKAGRTD 429
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+LF+E+ P+ TYN ++D + G L M+ C+ +T +LL+
Sbjct: 430 AAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKVTKSLLV 489
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 83/192 (43%)
Query: 273 EMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
+++ ++ M+ ++ K D FN LI YG+ +K Q + +PT T++SMI
Sbjct: 13 DVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMI 72
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKD 392
+ K ++++M K+ P T+ +I D V A +F ++ KL
Sbjct: 73 QVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVS 132
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
V T ++ + G LFE+ G P+ TY + A+ A + +
Sbjct: 133 PDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDI 192
Query: 453 LKRMEQNGIVPN 464
++M Q G+ P+
Sbjct: 193 FQQMVQKGLQPD 204
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 78/178 (43%)
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
G + +D ++++ +S+ + K FN++I YG+A + KA T P+
Sbjct: 6 GAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTA 65
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
TY +I ++ +V ++ ++ K +T N ++++ EA +F +
Sbjct: 66 YTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGD 125
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ V+PD TY +L ++ + V KL + M G PN + + F S+
Sbjct: 126 MFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSA 183
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 182/400 (45%), Gaps = 34/400 (8%)
Query: 83 VRVLMRSFSDKEPLVRTLNKYVKVVRSEHCF--------LLFEELGKSDKWLQCLEVFRW 134
VR+LM E V+ + +++ + S++ F L +LGK D +++ R
Sbjct: 133 VRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDM----VDLARD 188
Query: 135 MQKQRWYIADTGI------YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
M + + ++GI ++ +I ++ KKG+ + A + S + P+ Y +LI
Sbjct: 189 MYIK---MLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLIL 245
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELH 247
H + L A F +M + C PN VTY+ L+ C++ R +++ + +E+
Sbjct: 246 GHCRNHN----LDLAFAMFDRMVK-DGCDPNSVTYSTLINGLCSEGR-LEEAMDMLEEMV 299
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
+ + P +YTY + + G E +L +MK C P+I TF LI + F+
Sbjct: 300 QKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFE 359
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE---YVFQKMTAMKYTPSFITYE 364
++ ++ PT T+N++I + ++G+ E +F+ M + PS TY
Sbjct: 360 IAIGLYHKMLADGLVPTTVTYNALI---NQLCVEGRFETAFTIFKWMLSHGSLPSTQTYN 416
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
II + ++ +A IFD++ K G V T N ++ YC G A L E
Sbjct: 417 EIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGN 476
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G+ PD+ TY L +++ E L M ++GI PN
Sbjct: 477 GLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPN 516
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 139/330 (42%), Gaps = 7/330 (2%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+R + + ++ LI+ + + G+ +A+ L+ +M G P YNALI L +
Sbjct: 334 KKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALIN-QLCVEGR 392
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+ A F+ M P+ TYN +++ ++ + +F ++ ++ +P++
Sbjct: 393 FET---AFTIFKWMLS-HGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVI 448
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TYN ++ Y K G + +L MK N KPD T+ LI + + + +F +
Sbjct: 449 TYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGM 508
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
M P T+ ++I Y A +F KM PS TY +I+ + +++
Sbjct: 509 MEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSI 568
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
S A ++ K G V T + ++ C NG A +F P+ TY L
Sbjct: 569 SEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSL 628
Query: 437 YKAYTKANMKELVQ--KLLKRMEQNGIVPN 464
+ E + LL R+ G PN
Sbjct: 629 IYGLCQEGRAEDAEMYNLLARLTHYGCEPN 658
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 152/382 (39%), Gaps = 49/382 (12%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L +L ++ +F+WM + T Y+++I G + AM +F +M +
Sbjct: 383 LINQLCVEGRFETAFTIFKWMLSHG-SLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKA 441
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P+ YN LI + K L A+ + MKG KP+ TY L+ ++
Sbjct: 442 GSSPNVITYNTLIYGYC----KQGNLNNAMRLLEIMKG-NGLKPDAWTYTELISGFSRGG 496
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
++ +LF + E ++P+ TY ++D Y + + ++ +M + P T+N
Sbjct: 497 KLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYN 556
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++I + K + + E ++ P + T+ S I + G A +F +M
Sbjct: 557 VMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKR 616
Query: 355 KYTPSFITYECIITMYGYC-DNVSRAREIFDELSKL---GKDMKVSTLN----------- 399
Y P+ TY +I YG C + + E+++ L++L G + V T
Sbjct: 617 NYFPNLYTYSSLI--YGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGR 674
Query: 400 ------------------------AMLEAYCMNGLPTEADL-LFENSHNMGVTPDSSTYK 434
A+L C N L E+ L +F + +G S YK
Sbjct: 675 CYEADQLVVSMQKKGLQPSEEIYRALLIGECKN-LKVESALNIFYSMDTLGFQLHLSDYK 733
Query: 435 LLYKAYTKANMKELVQKLLKRM 456
L A K N E Q + + M
Sbjct: 734 ALICALCKENFIEEAQCIFQTM 755
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 114/250 (45%), Gaps = 20/250 (8%)
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD----IITFN 294
V+ L + + + + AP + ++ + G +K + LS + S K D + +F
Sbjct: 115 VSMLNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINS---KYDFGYTLCSFT 171
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI-INYGKARLQGKAEYVFQKMTA 353
L+ GK D ++ +++S +P+L TFN+MI I K R+Q +A+ + +
Sbjct: 172 TLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQ-EAKLIMSHIFR 230
Query: 354 MKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P+ TY +I G+C N+ A +FD + K G D T + ++ C G
Sbjct: 231 YDAYPNAFTYTSLI--LGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
EA + E G+ P TY + + A +LL +M++ G VPN
Sbjct: 289 EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPN------- 341
Query: 472 LETFSSSLAG 481
++TF++ ++G
Sbjct: 342 IQTFTALISG 351
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 150/331 (45%), Gaps = 5/331 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +IA + + G+ A+ +F EM + G P+ YN +I H+ K L
Sbjct: 197 YNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHV----KGGDLEAGFRLR 252
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M + KPNIVTYN+LL +A +D+ L E+ + PD +TY+ + D +
Sbjct: 253 DQML-HDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 311
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + M S+ + T ++L++ K K EQV + L+H+ PT
Sbjct: 312 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 371
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N++I Y + R A +F++M + P ITY +I + V++A ++ E+
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 431
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
K G D V T N +++AY G + + + G+ D ++ + KA+ K
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+L M + PN + + ++ + S
Sbjct: 492 EAVAILDDMIYKDVAPNAQVYNSIIDAYIES 522
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 159/357 (44%), Gaps = 10/357 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMG--KKGQTRLAMWLFSEM 171
+LF+ L ++ + L +F K+ + G Y+ I + G K G+ A + +
Sbjct: 304 ILFDGLTRTGESRTMLSLFAESLKKGVML---GAYTCSILLNGLCKDGKVAKAEQVLEML 360
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
++G P +YN LI + RD L A F++MK +P+ +TYN L+
Sbjct: 361 VHTGLVPTTVIYNTLINGYCQVRD----LRGAFCIFEQMKS-RHIRPDHITYNALINGLC 415
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ V + L E+ +S + P + T+N ++DAYG G +++ +VLS M+ K D+I
Sbjct: 416 KLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVI 475
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
+F ++ ++ K + + +++ P +NS+I Y ++ +A + +KM
Sbjct: 476 SFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKM 535
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+ S +TY ++ + A E+ L G V + N ++ A C G
Sbjct: 536 KNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDT 595
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+A L + + G+ P TY L A A ++ L ++M + P+ +
Sbjct: 596 DKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIY 652
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 158/352 (44%), Gaps = 10/352 (2%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM 171
C +L L K K + +V M + T IY+ LI + R A +F +M
Sbjct: 337 CSILLNGLCKDGKVAKAEQVLE-MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQM 395
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK--GMERCKPNIVTYNILLRA 229
++ RPD YNALI K + + KA +M+ G++ P++ T+N L+ A
Sbjct: 396 KSRHIRPDHITYNALINGLC----KLEMVTKAEDLVMEMEKSGVD---PSVETFNTLIDA 448
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
A +++ + ++ + + D+ ++ V+ A+ KNG I E ++L M P+
Sbjct: 449 YGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPN 508
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
+N +ID+Y + ++ + + + +S ++ T+N ++ ++ +AE +
Sbjct: 509 AQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIY 568
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
+ P ++Y II+ + +A E+ E++K G + T + ++ A G
Sbjct: 569 TLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAG 628
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ + L++ + V P SS Y ++ AY + V L K M + GI
Sbjct: 629 RVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 680
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 142/339 (41%), Gaps = 9/339 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS L + + G++R + LF+E G Y I + +D A A+
Sbjct: 298 DGFTYSILFDGLTRTGESRTMLSLFAESLKKGVML--GAYTCSILLNGLCKDGKVAKAEQ 355
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ G+ P V YN L+ Q R++ +F+++ + PD TYN +++
Sbjct: 356 VLEMLVHTGL---VPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALIN 412
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K M+ + E ++ M+ + P + TFN LID+YG +K V + K
Sbjct: 413 GLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKS 472
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ +F S++ + K +A + M P+ Y II Y + +A +
Sbjct: 473 DVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLV 532
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+++ G + T N +L+ C + EA+ L N G+ PD +Y + A
Sbjct: 533 EKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNK 592
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGS 482
+ +LL+ M + GI P R + T S+LA +
Sbjct: 593 GDTDKALELLQEMNKYGIRPTLRTY----HTLVSALASA 627
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 136/327 (41%), Gaps = 12/327 (3%)
Query: 155 MGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME 214
+G+ R A F + +G RPD +N ++ A + D L AL ++M E
Sbjct: 135 VGRHADVRAA---FGLLVAAGARPDTFAWNKVVQACVAAGD----LDVALAMVRRMGRSE 187
Query: 215 RCKP-NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
P + +YN+++ ++ +F E+ + + P+ TYN ++D + K G ++
Sbjct: 188 GAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEA 247
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
+ +M + KP+I+T+N+L+ + D+ + + P F I+
Sbjct: 248 GFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPD--GFTYSIL 305
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGK 391
G R + ++K Y C I + G C + V++A ++ + L G
Sbjct: 306 FDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGL 365
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
N ++ YC A +FE + + PD TY L K M +
Sbjct: 366 VPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAED 425
Query: 452 LLKRMEQNGIVPNKRFFLEALETFSSS 478
L+ ME++G+ P+ F ++ + ++
Sbjct: 426 LVMEMEKSGVDPSVETFNTLIDAYGTA 452
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 87/213 (40%), Gaps = 4/213 (1%)
Query: 253 PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
P + + N ++++ G ++ + + + +PD +N ++ + D +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGK---AEYVFQKMTAMKYTPSFITYECIITM 369
+ + S+ P F+ ++ G R GK A VF +M M P++ITY +I
Sbjct: 180 VRRMGRSEGAPPPDAFSYNVVIAGLWR-SGKGSDALKVFDEMVDMGVVPNWITYNTMIDG 238
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
+ ++ + D++ G + T N +L C G E +L + + + PD
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPD 298
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
TY +L+ T+ + L + G++
Sbjct: 299 GFTYSILFDGLTRTGESRTMLSLFAESLKKGVM 331
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 152/326 (46%), Gaps = 15/326 (4%)
Query: 144 DTGIYSKLI---AVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
DT ++ L+ V+GK G+ A+ +F +M G +P+ Y L+ K + L
Sbjct: 125 DTATFTTLVRGLCVVGKIGE---ALDVFDKMVGEGFQPNVVTYGTLMNGLC----KDRQL 177
Query: 201 AKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
+AL F +M KG+ P+I TYN L+ A V L E+ +S + P++ +
Sbjct: 178 TEALNLFSEMIAKGI---SPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSL 234
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N V+DA K G + E V+ M +PD++T+ L+D + R D+ +VF ++
Sbjct: 235 NIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVR 294
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
+ + ++N++I Y K + KA Y+F++M + P+ +TY +I + +
Sbjct: 295 NGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQD 354
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A +F+E+ G+ + T + +L+ C N EA L + + PD Y +
Sbjct: 355 AIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAID 414
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPN 464
+A E + L + G+ P+
Sbjct: 415 GMCRAGDLEAARDLFSNLAPRGLQPD 440
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 7/268 (2%)
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L AL F +M M P I + LL + A+ ++ V +L K++ + PD+YT
Sbjct: 37 LDDALSSFHRMLHMHP-PPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLT 95
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
V++++ + SVL+++ +PD TF L+ + VF ++
Sbjct: 96 IVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGE 155
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS-- 377
+P + T+ +++ K R +A +F +M A +P TY +I + C+
Sbjct: 156 GFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLI--HALCNLCEWK 213
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
+ +E+ K V +LN +++A C G TEA + + GV PD TY L
Sbjct: 214 HVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALM 273
Query: 438 KAYT-KANMKELVQKLLKRMEQNGIVPN 464
+ ++ M E V K+ M +NG V N
Sbjct: 274 DGHCLRSEMDEAV-KVFDMMVRNGCVCN 300
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 129/297 (43%), Gaps = 6/297 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ + L K K + +V M Q D Y+ L+ + + A+ +F M
Sbjct: 236 IVVDALCKEGKVTEAHDVVDMM-IQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVR 294
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
+GC + YN LI + K + + KA+ F++M E PN +TY+ L+
Sbjct: 295 NGCVCNVVSYNTLINGYC----KIQRIDKAMYLFEEMCRQELI-PNTMTYSTLIHGLCHV 349
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ ALF E+ P++ TY+ ++D KN + E ++L ++ + PD+ +
Sbjct: 350 GRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVY 409
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N+ ID + + +F +L +P + T N MI K L +A +F++M
Sbjct: 410 NIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDE 469
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
+ TY I + SRA ++ +E+ G VST +++ +GL
Sbjct: 470 NGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGL 526
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 22/195 (11%)
Query: 100 LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG 159
+N Y K+ R + LFEE+ + + I +T YS LI + G
Sbjct: 308 INGYCKIQRIDKAMYLFEEMCRQE-----------------LIPNTMTYSTLIHGLCHVG 350
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
+ + A+ LF+EM G P+ Y+ L L K LA+A+ + ++G P+
Sbjct: 351 RLQDAIALFNEMVACGQIPNLVTYSIL----LDYLCKNHRLAEAMALLKAIEG-SNLDPD 405
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+ YNI + +A +++ LF L L PD++T+N ++ K G++ E +
Sbjct: 406 VQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFR 465
Query: 280 RMKSNQCKPDIITFN 294
M N C + T+N
Sbjct: 466 EMDENGCLRNGCTYN 480
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/247 (18%), Positives = 102/247 (41%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P++ T I++ + VD ++ ++ + PD T+ ++ G I E V
Sbjct: 89 PDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDV 148
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
+M +P+++T+ L++ K + + +F ++ P + T+NS+I
Sbjct: 149 FDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCN 208
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
+ +M K P+ ++ ++ V+ A ++ D + + G + V T
Sbjct: 209 LCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVT 268
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
A+++ +C+ EA +F+ G + +Y L Y K + L + M
Sbjct: 269 YAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMC 328
Query: 458 QNGIVPN 464
+ ++PN
Sbjct: 329 RQELIPN 335
>gi|414879860|tpg|DAA56991.1| TPA: hypothetical protein ZEAMMB73_837882 [Zea mays]
Length = 677
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 168/379 (44%), Gaps = 55/379 (14%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT---RDKAKAL 200
D ++S LI + + G A+ LFS +R +G RPD YNA + A+ + RD + L
Sbjct: 211 DLILFSNLIHLALRGGDAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSDLLRDAKRML 270
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQ-ARNVDQVNALFKELHE-SILAPDIYTY 258
M + P+ TY+ +L A A+ R++ V+ LF + + + PDI +
Sbjct: 271 ------LHDMPA-DGVAPDAETYSPILAALARRGRHLAAVS-LFSHMRAVARVKPDISVF 322
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N +++AYG+ + +E + + M+ P ++T+N ++ YG F + +F LM
Sbjct: 323 NIILNAYGQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLF-DLMR 381
Query: 319 SKE----------KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
S KP + T+N+MI YGK+ KA + Q+M A+ P ITY I++
Sbjct: 382 STSDGNGGAGSSVKPNVVTYNTMITIYGKSLEDEKAGRLVQEMQAIGVQPDAITYSTILS 441
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA-----DL------- 416
++ + RA +F++L + G ++ M+ AY GL ++A DL
Sbjct: 442 IWVKAGKLDRAARLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQAKRLLRDLKDPEGIP 501
Query: 417 -------------------LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
LF + N G DSS ++ + Y K V ++ M
Sbjct: 502 KETAIKILASAGRLEEAAWLFRRAVNTGEIKDSSVHRAMMDLYAKNRRHRNVIEVFDEMR 561
Query: 458 QNGIVPNKRFFLEALETFS 476
+ G +P+ A+ +
Sbjct: 562 KLGQLPDSEIIATAMNAYG 580
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 155/340 (45%), Gaps = 16/340 (4%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
++R D YS L+A + + G A+ M + PD +++ LI L D
Sbjct: 169 RERGVTPDAFSYSTLLAALTRAGHLDHALTFLPLMEDDAVAPDLILFSNLIHLALRGGDA 228
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDI 255
KALA F +++ +P++ YN + A C D L ++ +APD
Sbjct: 229 PKALA----LFSRLRAAG-IRPDLKAYNAAVAAYCKSDLLRDAKRMLLHDMPADGVAPDA 283
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKS-NQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
TY+ ++ A + G S+ S M++ + KPDI FN+++++YG+ + +++F
Sbjct: 284 ETYSPILAALARRGRHLAAVSLFSHMRAVARVKPDISVFNIILNAYGQLDLAREADRLFW 343
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM---------TAMKYTPSFITYEC 365
S+ + P++ T+N+M+ YG A L G+A ++F M P+ +TY
Sbjct: 344 SMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMRSTSDGNGGAGSSVKPNVVTYNT 403
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+IT+YG +A + E+ +G T + +L + G A LFE G
Sbjct: 404 MITIYGKSLEDEKAGRLVQEMQAIGVQPDAITYSTILSIWVKAGKLDRAARLFEKLREAG 463
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
D Y+ + AY +A + ++LL+ ++ +P +
Sbjct: 464 TEIDPVLYQTMVVAYERAGLVSQAKRLLRDLKDPEGIPKE 503
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 2/228 (0%)
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
++ YN+LLR+ +A + + L E+ E + PD ++Y+ ++ A + G + + L
Sbjct: 142 LIPYNLLLRSACRAGELRLASGLLLEMRERGVTPDAFSYSTLLAALTRAGHLDHALTFLP 201
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
M+ + PD+I F+ LI + K +F L + +P L +N+ + Y K+
Sbjct: 202 LMEDDAVAPDLILFSNLIHLALRGGDAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSD 261
Query: 340 LQGKAE-YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGK-DMKVST 397
L A+ + M A P TY I+ A +F + + + +S
Sbjct: 262 LLRDAKRMLLHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAVARVKPDISV 321
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
N +L AY L EAD LF + GV P TY + + Y A +
Sbjct: 322 FNIILNAYGQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGL 369
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 79/173 (45%), Gaps = 9/173 (5%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS ++++ K G+ A LF ++R +G DP +Y ++ A+ ++A +++A
Sbjct: 432 DAITYSTILSIWVKAGKLDRAARLFEKLREAGTEIDPVLYQTMVVAY----ERAGLVSQA 487
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ +K P + ++ A A +++ LF+ + D + +MD
Sbjct: 488 KRLLRDLK-----DPEGIPKETAIKILASAGRLEEAAWLFRRAVNTGEIKDSSVHRAMMD 542
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
Y KN + + V M+ PD +++YGK + FDK +++++
Sbjct: 543 LYAKNRRHRNVIEVFDEMRKLGQLPDSEIIATAMNAYGKLKEFDKAAALYQAM 595
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 150/326 (46%), Gaps = 9/326 (2%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
++ D Y LI + K G TR A L +M RP+ +YN ++ +D
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGL--CKDGLVTE 236
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
A+ L +G++ P++ TY L+ +V L ++ + + ++YTYN
Sbjct: 237 ARDLYSDVVGRGID---PDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNI 293
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++DA K GM+ + + + M +PD++TFN L+ Y + ++F +
Sbjct: 294 LIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECG 353
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSR 378
P + ++N +II Y K +A +F KM K P+ +TY +I G C + +S
Sbjct: 354 ITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLID--GLCKSGRISY 411
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A E+F + G V T N ML+A C L +A LF G+TP+ S+Y +L
Sbjct: 412 AWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILIN 471
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPN 464
Y K+ + L + M + +VP+
Sbjct: 472 GYCKSKRIDEAMNLFEEMHRRNLVPD 497
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 138/302 (45%), Gaps = 11/302 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI GQ R L +M + + YN LI A K L KA
Sbjct: 252 DVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALC----KKGMLGKA 307
Query: 204 LGYFQKMKGMERC-KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
M +ER +P++VT+N L+ +V + LF E + PD+++YN ++
Sbjct: 308 HDMRNLM--IERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILI 365
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
Y KN I E S+ ++M + P+I+T++ LID K ++F ++
Sbjct: 366 IGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPS 425
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAR 380
P + T+N M+ K +L KA +F M TP+ +Y +I GYC + + A
Sbjct: 426 PNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILIN--GYCKSKRIDEAM 483
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+F+E+ + T N +++ C +G + A LF H+ G D TY +L+ A+
Sbjct: 484 NLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAF 543
Query: 441 TK 442
+K
Sbjct: 544 SK 545
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 7/158 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS LI + K G+ A LFS + + G P+ YN ++ A K + + KA+ F
Sbjct: 396 YSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALC----KIQLVDKAIELF 451
Query: 208 QKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
M ER PN+ +YNIL+ +++ +D+ LF+E+H L PD TYN ++D
Sbjct: 452 NLM--FERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLC 509
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
K+G I + + M D+IT+N+L D++ K Q
Sbjct: 510 KSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQ 547
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 136/363 (37%), Gaps = 98/363 (26%)
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
A+ A+ F ++ M P++V +N++L + + ++ +L K++ + P I T
Sbjct: 58 AIDDAVALFTRLITMHPL-PSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTL 116
Query: 259 NGVMDAYGKNGMIKEMESVLSRM--------------------------KSNQCKPDIIT 292
+ +++ Y G + SVL + K+ + ++
Sbjct: 117 SILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVA 176
Query: 293 FNLLID--SYG-----------KRQAFDKMEQVFKSLMHSKE----KPTLPTFNSMIINY 335
L+D +YG R+AF+ L+H E +P + +N ++
Sbjct: 177 QGFLLDEVTYGTLINGLCKIGLTREAFE--------LLHKMEGQVVRPNVVIYNMIVDGL 228
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--------------------- 374
K L +A ++ + P TY C+I +G+C
Sbjct: 229 CKDGLVTEARDLYSDVVGRGIDPDVFTYTCLI--HGFCGLGQWREVTRLLCDMVDRNVNL 286
Query: 375 NVSRAREIFDELSK---LGK--DMK-----------VSTLNAMLEAYCMNGLPTEADLLF 418
NV + D L K LGK DM+ + T N ++ YC+ EA LF
Sbjct: 287 NVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLF 346
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ G+TPD +Y +L Y K N + L +M + PN + T+SS
Sbjct: 347 DTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPN-------IVTYSSL 399
Query: 479 LAG 481
+ G
Sbjct: 400 IDG 402
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 71/166 (42%), Gaps = 3/166 (1%)
Query: 302 KRQAFDKMEQ---VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
K+ FD ++ +F L+ P++ FN ++ + K + A + ++M TP
Sbjct: 52 KKSGFDAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITP 111
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
S +T +I Y + ++ A + + K G + TL +++ C+NG +A
Sbjct: 112 SIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFH 171
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
++ G D TY L K + +LL +ME + PN
Sbjct: 172 DSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPN 217
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 144/335 (42%), Gaps = 12/335 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + ++ A+ LF + G P+ YN LI L K + +A F
Sbjct: 261 YNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLL----KEDRVNEAFELF 316
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+ G+E P+ +TY + + +A V+ + K++ E PD+ ++N V++
Sbjct: 317 SGLVKHGLE---PDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGL 373
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K + E E +LS M++ C P+ I+FN LI + + K FK ++ KPT+
Sbjct: 374 CKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTV 433
Query: 326 PTFNSMIINYGKARLQGK---AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
T+N ++ KAR +G+ A +F M P +TY +I G + AR +
Sbjct: 434 VTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRL 493
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+ G V T N+++ C EA LF G PD+ TY + A K
Sbjct: 494 LGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCK 553
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
M + L + G+VP + ++ +
Sbjct: 554 QEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCA 588
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 154/343 (44%), Gaps = 18/343 (5%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VF M+K ++ + Y+ L++ + G+ A L+ M +G PD YN L
Sbjct: 72 VFDGMRKHGFW-PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTL---- 126
Query: 191 LHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
LH K L +AL F +G P++VTYN L+ +A +D+ + + +
Sbjct: 127 LHGFCKVGKLDEALKIFDGAVKRGF---VPDVVTYNALINGFCKADKLDEAQRILQRMVS 183
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR-QAFD 307
L PD+ TYN +++ KNG + E ++ P++IT++ LI + + +
Sbjct: 184 ESLVPDVVTYNSLVNGLCKNGRVDEARMLIV---DKGFSPNVITYSTLISGLCRELRRLE 240
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY--VFQKMTAMKYTPSFITYEC 365
Q+ + ++ + KP + ++N++I +G AR QG +E +F + Y P TY
Sbjct: 241 SARQLLEKMVLNGCKPDIVSYNALI--HGLAREQGVSEALKLFGSVLRQGYEPEVPTYNI 298
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+I D V+ A E+F L K G + T ++ C G +A L+ ++ G
Sbjct: 299 LIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKG 358
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
PD ++ + K + + LL ME G PN F
Sbjct: 359 CVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISF 401
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 149/347 (42%), Gaps = 11/347 (3%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
K+DK + + + M + + D Y+ L+ + K G+ A L + G P+
Sbjct: 167 KADKLDEAQRILQRMVSESL-VPDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNV 222
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
Y+ LI+ + + L A +KM + CKP+IV+YN L+ A+ + V +
Sbjct: 223 ITYSTLISGLCR---ELRRLESARQLLEKMV-LNGCKPDIVSYNALIHGLAREQGVSEAL 278
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
LF + P++ TYN ++D K + E + S + + +PD IT+ + ID
Sbjct: 279 KLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGL 338
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
K + + K + P + + N++I K + +AE + M A +P+
Sbjct: 339 CKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNA 398
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC---MNGLPTEADLL 417
I++ +I +A F E+ K G V T N +++ C G EA L
Sbjct: 399 ISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITL 458
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
F+ G PD TY L KA + ++LL ME G +PN
Sbjct: 459 FDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPN 505
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 146/333 (43%), Gaps = 27/333 (8%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
Y D Y+ L+ K G+ A+ +F G PD YNALI KA L
Sbjct: 116 YSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFC----KADKL 171
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+A Q+M E P++VTYN L+ + VD+ L + + +P++ TY+
Sbjct: 172 DEAQRILQRMVS-ESLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYST 227
Query: 261 VMDAYGKNGMIKEMES---VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
++ + ++ +ES +L +M N CKPDI+++N LI + Q + ++F S++
Sbjct: 228 LISGLCRE--LRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVL 285
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
+P +PT+N +I K +A +F + P ITY I D +
Sbjct: 286 RQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFI------DGLC 339
Query: 378 RAREIFDELSKLGKDM-------KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
+A + D L L KDM V + NA++ C EA++L G +P++
Sbjct: 340 KAGRVEDALLML-KDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNA 398
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
++ L +A + K M + G+ P
Sbjct: 399 ISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKP 431
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 129/304 (42%), Gaps = 43/304 (14%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K D+ + E+F + K D Y+ I + K G+ A+ + +M
Sbjct: 298 ILIDGLLKEDRVNEAFELFSGLVKHGLE-PDAITYTVFIDGLCKAGRVEDALLMLKDMDE 356
Query: 174 SGCRPDPSVYNALITAHLHTR--DKAKAL-----------------------------AK 202
GC PD +NA+I + D+A+ L K
Sbjct: 357 KGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKK 416
Query: 203 ALGYFQKM--KGMERCKPNIVTYNILLRACAQARN---VDQVNALFKELHESILAPDIYT 257
A+ F++M +G+ KP +VTYNIL+ +AR + + LF + E PD+ T
Sbjct: 417 AMTTFKEMLKRGV---KPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVT 473
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y+ ++D GK G + + +L M++ C P++ T+N LI D+ ++F +++
Sbjct: 474 YSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMV 533
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
P T+ ++I K + KA +F P+ Y +I G C V+
Sbjct: 534 EKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLID--GLC-AVA 590
Query: 378 RARE 381
R E
Sbjct: 591 RVDE 594
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 5/179 (2%)
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
PD T +L+ S K +K + + L+ K + TFN I +A G A+ V
Sbjct: 14 PDAYTVGILLRSLLKSGKIEKAHRFVEQLL-VKGLCDISTFNIYISGLCRASRIGDAQTV 72
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
F M + P+ ITY +++ G C+ +S A+ +++ + K G V T N +L +
Sbjct: 73 FDGMRKHGFWPNRITYNALLS--GLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGF 130
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
C G EA +F+ + G PD TY L + KA+ + Q++L+RM +VP+
Sbjct: 131 CKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPD 189
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/279 (19%), Positives = 114/279 (40%), Gaps = 33/279 (11%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
+I T+NI + +A + +F + + P+ TYN ++ G + + +++
Sbjct: 49 DISTFNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALY 108
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
RM PD++T+N L+ + K D+ ++F + P + T+N++I + KA
Sbjct: 109 ERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKA 168
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIIT------------------------------ 368
+A+ + Q+M + P +TY ++
Sbjct: 169 DKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTL 228
Query: 369 MYGYCDNVSR---AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+ G C + R AR++ +++ G + + NA++ +EA LF + G
Sbjct: 229 ISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQG 288
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
P+ TY +L K + +L + ++G+ P+
Sbjct: 289 YEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPD 327
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 159/337 (47%), Gaps = 13/337 (3%)
Query: 149 SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQ 208
++LI+ + + G+T A + + G + + NAL+TA +A+ +
Sbjct: 274 TQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTA----LGRAREFKRMNTLLA 329
Query: 209 KMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES-----ILAPDIYTYNGVMD 263
+MK M+ +PN+VT+ IL+ + R VD+ +F++++ ++ PD+ TYN ++D
Sbjct: 330 EMKEMD-IQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLID 388
Query: 264 AYGKNGMIKEMESVLSRMKSN-QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
K G +E ++ RM+S +C P+ +T+N LID Y K + ++F +
Sbjct: 389 GLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVP 448
Query: 323 PTLPTFNSMIINYGK-ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P + T N+++ K R+ G E+ F +M + +TY +I + +N+ +A E
Sbjct: 449 PNVVTLNTLVDGMCKHGRINGAVEF-FNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAME 507
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+FDE+ + G ++ G A + G +PD ++ +L +
Sbjct: 508 LFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFC 567
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ N + ++LK ME GI P+ + + FS +
Sbjct: 568 RKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKT 604
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 155/356 (43%), Gaps = 43/356 (12%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + L K + + L + M+ Q + +T Y+ LI K A LF +M
Sbjct: 386 LIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKD 445
Query: 175 GCRPDPSVYNALITAHL-HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G P+ N L+ H R + A+ +F +M+G + K N VTY L+RA
Sbjct: 446 GVPPNVVTLNTLVDGMCKHGR-----INGAVEFFNEMQG-KGLKGNAVTYTALIRAFCNV 499
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
N+++ LF E+ E+ +PD Y ++ + G + VLS+MK PDI++F
Sbjct: 500 NNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSF 559
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N+LI+ + ++ D+ ++ K + ++ KP T+N++I ++ K A + +KM
Sbjct: 560 NVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVK 619
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P+ +TY A++ AYC+NG E
Sbjct: 620 EGLVPTVVTY-----------------------------------GALIHAYCLNGNLDE 644
Query: 414 ADLLFEN-SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
A +F + S V P++ Y +L + + N +L L+ M+ G+ PN F
Sbjct: 645 AMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTF 700
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 10/226 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +Y LI+ + + G+ A ++ S+M+ +G PD +N LI +A
Sbjct: 520 DAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEA---- 575
Query: 204 LGYFQKMKGMERC--KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
++ +K ME KP+ VTYN L+ ++ + + L K++ + L P + TY +
Sbjct: 576 ---YEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGAL 632
Query: 262 MDAYGKNGMIKEMESVLSRMKS-NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
+ AY NG + E + M S ++ P+ + +N+LI+S ++ D + +
Sbjct: 633 IHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKG 692
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
KP TFN+M + KA + +MT P +IT E +
Sbjct: 693 VKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEIL 738
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 4/155 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI+ K G A L +M G P Y ALI A+ + L +A
Sbjct: 590 DGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGN----LDEA 645
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ F+ M + PN V YNIL+ + + VD +L ++ + P+ T+N +
Sbjct: 646 MKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFK 705
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+ + + ++ RM + C PD IT +L +
Sbjct: 706 GLQEKNWLSKAFELMDRMTEHACNPDYITMEILTE 740
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 113/268 (42%), Gaps = 18/268 (6%)
Query: 214 ERCKPNIVTY--NILLRACAQARNVDQVNALFKELHE--SILAPDIYTYNGVMDAYGKNG 269
E C +T+ NIL+ + VD L E+ + + P+ T + V A K
Sbjct: 184 ELCPSRRLTHIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRD 243
Query: 270 MI------KEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ +E+ ++S+ ++ P+ I LI + D+ V LM
Sbjct: 244 KVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVM 303
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ N+++ G+AR + + +M M P+ +T+ +I V A E+F
Sbjct: 304 EAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVF 363
Query: 384 DELSKLGK------DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG-VTPDSSTYKLL 436
++++ G+ + V T N +++ C G E L E + P++ TY L
Sbjct: 364 EKMNG-GESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCL 422
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y KA+M E ++L +M ++G+ PN
Sbjct: 423 IDGYCKASMIEAARELFDQMNKDGVPPN 450
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 14/134 (10%)
Query: 93 KEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLI 152
KE LV T+ Y ++ H + L L ++ +++FR M +T IY+ LI
Sbjct: 619 KEGLVPTVVTYGALI---HAYCLNGNLDEA------MKIFRDMSSTSKVPPNTVIYNILI 669
Query: 153 AVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKG 212
+ +K Q LA+ L +M+ G +P+ + +NA+ + L+KA +M
Sbjct: 670 NSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKG----LQEKNWLSKAFELMDRMTE 725
Query: 213 MERCKPNIVTYNIL 226
C P+ +T IL
Sbjct: 726 -HACNPDYITMEIL 738
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 149/320 (46%), Gaps = 8/320 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + + LA+ F ++ +G R D + N L+ + +AL L
Sbjct: 114 YAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRT 173
Query: 208 QKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHE--SILAPDIYTYNGVMDA 264
++ C P++ +Y+ILL++ C Q ++ Q + L + + E ++ +PD+ YN V+D
Sbjct: 174 PELG----CVPDVFSYSILLKSLCDQGKS-GQADDLLRMMAEGGAVCSPDVVAYNTVIDG 228
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ K G + + + M PD +T++ ++ + K +A DK E + +++ P
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
T+N++I Y +A VF++M P +T+ ++ + AR++FD
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFD 348
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
++ G++ V + N ML Y G + LF+ G+ P T+ +L KAY
Sbjct: 349 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCG 408
Query: 445 MKELVQKLLKRMEQNGIVPN 464
M + + M +G+ PN
Sbjct: 409 MLDKAMIIFNEMRDHGVKPN 428
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 163/385 (42%), Gaps = 37/385 (9%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIA-DTGIYSKLIAVMGKKGQTRLAMWLFSEMR 172
+L + L K Q ++ R M + + D Y+ +I K+G A LF EM
Sbjct: 187 ILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMV 246
Query: 173 NSGCRPDPSVYNALITAHLHTR--DKAKALAKAL-----------------GY------- 206
G PD Y++++ A R DKA+A + + GY
Sbjct: 247 QRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWK 306
Query: 207 -----FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
F++M+ + P++VT+N+L+ + + + + +F + PD+++YN +
Sbjct: 307 EAVRVFKEMR-RQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIM 365
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
++ Y G + +M + M + P I TFN+LI +Y DK +F +
Sbjct: 366 LNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGV 425
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS--RA 379
KP + T+ ++I + A F +M P Y C+I G+C + S +A
Sbjct: 426 KPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQ--GFCTHGSLLKA 483
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+E+ E+ G + + ++++ C G +A +F+ + N+G+ P + Y +L
Sbjct: 484 KELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDG 543
Query: 440 YTKANMKELVQKLLKRMEQNGIVPN 464
Y E ++ M GI PN
Sbjct: 544 YCLVGKMEKALRVFDAMVSAGIEPN 568
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 147/346 (42%), Gaps = 10/346 (2%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
+ +W + + VF+ M++Q + D ++ L+ + K G+ + A +F M G PD
Sbjct: 302 TGQWKEAVRVFKEMRRQSI-LPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 360
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
YN ++ + L F M G + P I T+N+L++A A +D+
Sbjct: 361 SYNIMLNGYA----TKGCLVDMTDLFDLMLG-DGIAPVICTFNVLIKAYANCGMLDKAMI 415
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
+F E+ + + P++ TY V+ A + G + + ++M PD ++ LI +
Sbjct: 416 IFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFC 475
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
+ K +++ +M++ + F+S+I N K A+ +F + P+ +
Sbjct: 476 THGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAV 535
Query: 362 TYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
Y + M GYC + +A +FD + G + ++ YC G E LF
Sbjct: 536 VYS--MLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFR 593
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
G+ P + Y ++ +A + M ++GI NK
Sbjct: 594 EMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNK 639
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 140/307 (45%), Gaps = 11/307 (3%)
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM-KGMERCKPNIVTYNILLRACAQA 233
GC PD Y+ L+ + D+ K+ +A + M +G C P++V YN ++ +
Sbjct: 177 GCVPDVFSYSILLKSLC---DQGKS-GQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKE 232
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+V++ LFKE+ + + PD TY+ V+ A K + + E+ L +M + P+ T+
Sbjct: 233 GDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTY 292
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM---IINYGKARLQGKAEYVFQK 350
N LI Y + + +VFK + P + TFN + + YGK + +A VF
Sbjct: 293 NNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIK---EARDVFDT 349
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M P +Y ++ Y + ++FD + G + T N +++AY G+
Sbjct: 350 MAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGM 409
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
+A ++F + GV P+ TY + A + + + +M G+ P+K +
Sbjct: 410 LDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 469
Query: 471 ALETFSS 477
++ F +
Sbjct: 470 LIQGFCT 476
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 9/207 (4%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+YS L+ G+ A+ +F M ++G P+ VY L+ + K + + L
Sbjct: 536 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYC----KIGRIDEGLSL 591
Query: 207 FQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
F++M KG+ KP+ + YNI++ +A F E+ ES +A + TY+ V+
Sbjct: 592 FREMLQKGI---KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRG 648
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
KN E + +++ K DIIT N +I + + ++ + +F S+ S P
Sbjct: 649 LFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPC 708
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKM 351
+ T++ MI N K L +AE +F M
Sbjct: 709 VVTYSIMITNLIKEGLVEEAEDMFSSM 735
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 142/363 (39%), Gaps = 48/363 (13%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +IA + + G+ AM F++M + G PD Y+ LI KA K L
Sbjct: 432 YTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKA--KELISE 489
Query: 208 QKMKGMERCKPNIVTYN-ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
GM +IV ++ I+ C R +D N +F L P Y+ +MD Y
Sbjct: 490 IMNNGMHL---DIVLFSSIINNLCKLGRVMDAQN-IFDLTVNVGLHPTAVVYSMLMDGYC 545
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
G +++ V M S +P+ + + L++ Y K D+ +F+ ++ KP+
Sbjct: 546 LVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTI 605
Query: 327 TFNSMIINYGKA-----------------------------------RLQGKAEYVFQKM 351
+N +I +A R +A ++F+++
Sbjct: 606 LYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKEL 665
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
AM IT +I V A+++F +S+ G V T + M+ GL
Sbjct: 666 RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLV 725
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
EA+ +F + N G PDS + + K N L ++++ + F LE
Sbjct: 726 EEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDE------RNFSLEH 779
Query: 472 LET 474
L T
Sbjct: 780 LTT 782
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 115/266 (43%), Gaps = 19/266 (7%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++S +I + K G+ A +F N G P VY+ L+ + + KA
Sbjct: 498 DIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLV----GKMEKA 553
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
L F M G+E PN V Y L+ + +D+ +LF+E+ + + P YN +
Sbjct: 554 LRVFDAMVSAGIE---PNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 610
Query: 262 MDAYGKNGM-----IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+D + G +K E S + N+C T+++++ K + FD+ +FK L
Sbjct: 611 IDGLFEAGRTVPAKVKFHEMTESGIAMNKC-----TYSIVLRGLFKNRCFDEAIFLFKEL 665
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
K + T N+MI + R +A+ +F ++ P +TY +IT V
Sbjct: 666 RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLV 725
Query: 377 SRAREIFDELSKLGKDMKVSTLNAML 402
A ++F + G + LN ++
Sbjct: 726 EEAEDMFSSMQNAGCEPDSRLLNHVV 751
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 87/172 (50%), Gaps = 9/172 (5%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
++G+ D+ L +FR M Q+ T +Y+ +I + + G+T A F EM SG
Sbjct: 581 KIGRIDEGLS---LFREML-QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIA 636
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
+ Y+ ++ K + +A+ F++++ M K +I+T N ++ Q R V+
Sbjct: 637 MNKCTYSIVLRGLF----KNRCFDEAIFLFKELRAMN-VKIDIITLNTMIAGMFQTRRVE 691
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
+ LF + S L P + TY+ ++ K G+++E E + S M++ C+PD
Sbjct: 692 EAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPD 743
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 14/229 (6%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
+GK +K L+ VF M D +Y L+ K G+ + LF EM G +P
Sbjct: 547 VGKMEKALR---VFDAMVSAGIEPNDV-VYGTLVNGYCKIGRIDEGLSLFREMLQKGIKP 602
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
+YN +I A K + M +C TY+I+LR + R D+
Sbjct: 603 STILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKC-----TYSIVLRGLFKNRCFDE 657
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
LFKEL + DI T N ++ + ++E + + + + + P ++T++++I
Sbjct: 658 AIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMIT 717
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
+ K ++ E +F S+ ++ +P +S ++N+ L K E V
Sbjct: 718 NLIKEGLVEEAEDMFSSMQNAGCEP-----DSRLLNHVVRELLKKNEIV 761
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 36/193 (18%), Positives = 81/193 (41%), Gaps = 9/193 (4%)
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA-EYVFQK 350
T+ +L+D + + F L+ + + + N ++ + +A+ +A + + +
Sbjct: 113 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHR 172
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
+ P +Y I + CD ++ + D L + + V + + + ++G
Sbjct: 173 TPELGCVPDVFSYS--ILLKSLCDQ-GKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGF 229
Query: 411 PTEADL-----LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
E D+ LF+ G+ PD TY + A KA + + L++M G++PN
Sbjct: 230 FKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNN 289
Query: 466 RFFLEALETFSSS 478
+ + +SS+
Sbjct: 290 WTYNNLIYGYSST 302
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 140/317 (44%), Gaps = 5/317 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I ++ K G++ A + EM + PD VY LI H K + A +F
Sbjct: 331 YNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLI----HGFFKLGHVRTANKWF 386
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M ++ P+ +TY L++ Q V + LF E+ L PD TY ++D Y K
Sbjct: 387 DEMLS-KKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCK 445
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + S+ + M P+I+T+ LID K D ++ + + +
Sbjct: 446 AGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCI 505
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+NSM+ KA +A + ++M P ITY +I Y ++ +A ++ E+
Sbjct: 506 YNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEML 565
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G V T N ++ +CM G+ + D L G+ PD+ TY L K + N
Sbjct: 566 DRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMN 625
Query: 448 LVQKLLKRMEQNGIVPN 464
K+ KRM G+ P+
Sbjct: 626 TTTKIYKRMRNQGVAPD 642
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 148/323 (45%), Gaps = 11/323 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
+T Y+ +I + + G+ + A L +M PD Y+ +I + H + KAL K
Sbjct: 257 NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKAL-KL 315
Query: 204 LGYFQKMKGMERCKPNIVTYN-ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
+ Q +KG+ KPN TYN I+L C ++ + L +E+ + PD Y ++
Sbjct: 316 MDDMQ-IKGL---KPNRYTYNSIILLLCKIGKSFEAEKVL-REMMSQKIIPDNVVYTTLI 370
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+ K G ++ M S + PD IT+ LI +G+ + + +F ++ K
Sbjct: 371 HGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLK 430
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAR 380
P T+ ++I Y KA A + +M M TP+ +TY +I G C + + A
Sbjct: 431 PDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALID--GLCKHGELDTAN 488
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
E+ DE+ K G + V N+M+ C G +A L + G+ PD+ TY + AY
Sbjct: 489 ELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAY 548
Query: 441 TKANMKELVQKLLKRMEQNGIVP 463
+ + KLL+ M G+ P
Sbjct: 549 CRLGDIDKAHKLLQEMLDRGLQP 571
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 143/325 (44%), Gaps = 5/325 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI G+ G+ LF EM + G +PD Y LI + KA + A
Sbjct: 397 DYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYC----KAGEMVNA 452
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+M M PNIVTY L+ + +D N L E+ + L ++ YN +++
Sbjct: 453 FSLHNEMVQMGM-TPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVN 511
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K G I++ ++ M+ PD IT+ +ID+Y + DK ++ + ++ +P
Sbjct: 512 GICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP 571
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T+ TFN ++ + + + + M P ITY ++ + ++++ +I+
Sbjct: 572 TVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIY 631
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ G +T N +++ +C EA L++ G P ++Y L K + K
Sbjct: 632 KRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKK 691
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFF 468
++L + M +G+V + +
Sbjct: 692 RKFXEARELFEEMRGHGLVADGEIY 716
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 113/258 (43%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P++V+Y+ ++ + + L ++ L P+ YTYN ++ K G E E V
Sbjct: 291 PDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKV 350
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L M S + PD + + LI + K + F ++ K P T+ ++I +G+
Sbjct: 351 LREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQ 410
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
+ + +F +M + P +TY +I +Y + A + +E+ ++G + T
Sbjct: 411 GGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVT 470
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
A+++ C +G A+ L + G+ + Y + KA E KL+K ME
Sbjct: 471 YGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEME 530
Query: 458 QNGIVPNKRFFLEALETF 475
GI P+ + ++ +
Sbjct: 531 VAGIDPDAITYTTVIDAY 548
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 99/232 (42%)
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
A N + + K E ++ + +YN ++ + + G +KE +L +M PD+++
Sbjct: 236 ANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVS 295
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
++ +ID Y K ++ + KP T+NS+I+ K +AE V ++M
Sbjct: 296 YSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMM 355
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ K P + Y +I + +V A + FDE+ T +++ + G
Sbjct: 356 SQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVI 415
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
E LF + G+ PD TY L Y KA L M Q G+ PN
Sbjct: 416 EPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPN 467
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 162 RLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV 221
RL W+ + G PD YN L+ H R+ K +++M+ + P+
Sbjct: 594 RLLGWMLEK----GIVPDAITYNTLMKQHC-IRNSMNTTTKI---YKRMRN-QGVAPDSN 644
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
TYNIL++ +ARN+ + L+KE+ E P + +YN ++ + K E + M
Sbjct: 645 TYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEM 704
Query: 282 KSNQCKPDIITFNLLID 298
+ + D +N +D
Sbjct: 705 RGHGLVADGEIYNFFVD 721
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 22/181 (12%)
Query: 94 EPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIA 153
+P V T N V+ + C L E G D+ L WM ++ + D Y+ L+
Sbjct: 570 QPTVVTFN----VLMNGFCMLGMLEDG--DRLLG------WML-EKGIVPDAITYNTLMK 616
Query: 154 VMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--K 211
+ ++ MRN G PD + YN LI H KA+ L +A +++M K
Sbjct: 617 QHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHC----KARNLKEAWFLYKEMIEK 672
Query: 212 GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMI 271
G P + +YN L++ + R + LF+E+ L D YN +D + G +
Sbjct: 673 GY---VPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDV 729
Query: 272 K 272
+
Sbjct: 730 E 730
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 94/473 (19%), Positives = 164/473 (34%), Gaps = 80/473 (16%)
Query: 11 LRLSTLSSSSASSSSSSSSSSFNQSSSQNYNFTHRHIPLS--LRTRPRTGICCVWTRPRS 68
R S L SS S+S + F S+ + + +P S L+TRP P+
Sbjct: 14 FRFSCLQVSSNSASRCNFLPFF---LSRRWLTQSQRVPSSFLLQTRPFPD-----YSPKK 65
Query: 69 KRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQC 128
R +E + V L RS EPL R L + R +H L++ + + +
Sbjct: 66 PTIRDTELIHDITAVIKLRRS----EPLHRILKAHESNFRYDH--LIWVLMNIKNDYNLV 119
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L F W + +R + IAV+ RLA L V++ +
Sbjct: 120 LAFFDWARVRREPSLEARCIIIHIAVVSN--DLRLAHEL--------------VHDYFLN 163
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
+ L K L Y K G PN + ++I + + ++ + L +L
Sbjct: 164 SKLEIGVKMTQFTHRLIYTYKYWG-----PNPIAFDIFFQVLVEIGHLSEARKLLDKLL- 217
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
+YG + + LSR+ +N +
Sbjct: 218 ---------------SYGLVVTVDSCNAFLSRIANNS---------------------EG 241
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY---TPSFITYEC 365
+E K ++N II Y RL GK + + + M + TP ++Y
Sbjct: 242 IEMAIKVFCEYGISWNTTSYN--IIIYSLCRL-GKVKEAHRLLMQMDFRSSTPDVVSYST 298
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+I Y + + +A ++ D++ G T N+++ C G EA+ + +
Sbjct: 299 VIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQK 358
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ PD+ Y L + K K M I P+ + ++ F
Sbjct: 359 IIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQG 411
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 155/351 (44%), Gaps = 7/351 (1%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L L ++ K LE FR M + + YS LI + K + A+ L M+
Sbjct: 84 ILVTGLCRAGKIETALEFFRKMDDRCS--PNVITYSVLIDGLCKANRVSQAVELLESMKA 141
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
GC PD Y L+ K +A A ++M C PN+VTYN LL +A
Sbjct: 142 RGCSPDVITYTILVDGLC----KESKVAAAWEVLREMLD-AGCVPNLVTYNSLLHGLCRA 196
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
R V AL +++ P++ TY ++D K G +K+ ++L+ M PD++ +
Sbjct: 197 RRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIY 256
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N+LI+ K D+ + + + KP + T++S+I ++ +A + + +
Sbjct: 257 NMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKS 316
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P I Y +I V A ++++ ++ G D V T + +++ C G E
Sbjct: 317 RGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDE 376
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A LL MG P + TY L K N + +L++ ME++ P+
Sbjct: 377 AHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPS 427
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 170/386 (44%), Gaps = 47/386 (12%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K+++ Q +E+ M K R D Y+ L+ + K+ + A + EM +
Sbjct: 118 VLIDGLCKANRVSQAVELLESM-KARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLD 176
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY---------- 223
+GC P+ YN+L LH +A+ ++ AL + M C PN+VTY
Sbjct: 177 AGCVPNLVTYNSL----LHGLCRARRVSDALALMRDMT-CRGCTPNVVTYGTLIDGLCKV 231
Query: 224 -------------------------NILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
N+L+ +A VD+ AL + + PD+ TY
Sbjct: 232 GRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTY 291
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
+ V+ ++ + E +L +KS C PD+I ++ LID K D+ +++ +
Sbjct: 292 SSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTG 351
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NV 376
+ T++++I KA +A + +M M PS +TY +I G CD ++
Sbjct: 352 DGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIK--GLCDLNHL 409
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYC-MNGLPTEADLLFENSHNMGVTPDSSTYKL 435
A E+ +E+ + T N ++ C M + + A F+ + GV PD TY +
Sbjct: 410 DEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSI 469
Query: 436 LYKAYTKA-NMKELVQKLLKRMEQNG 460
L + K+ ++ EL +L +M Q G
Sbjct: 470 LLEGLKKSKDLHELRHLVLDQMVQLG 495
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 149/324 (45%), Gaps = 13/324 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + K + A LF M++ C P YN L+ T L +A+ F
Sbjct: 13 YNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRT----GKLERAMALF 68
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
Q+M ++R +++++NIL+ +A ++ F+++ + +P++ TY+ ++D K
Sbjct: 69 QEM--LDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRC-SPNVITYSVLIDGLCK 125
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ + +L MK+ C PD+IT+ +L+D K +V + ++ + P L T
Sbjct: 126 ANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVT 185
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+NS++ +AR A + + MT TP+ +TY +I G C V R ++ L+
Sbjct: 186 YNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID--GLC-KVGRVKDACAMLA 242
Query: 388 KL---GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ G + N ++ C E+ L + + G+ PD TY + ++N
Sbjct: 243 DMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSN 302
Query: 445 MKELVQKLLKRMEQNGIVPNKRFF 468
+ +LL ++ G P+ +
Sbjct: 303 RLDEACRLLLYVKSRGCPPDVILY 326
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 129/306 (42%), Gaps = 54/306 (17%)
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG------ 269
C+PN+VTYN L+ + D+ LF+ + +P + TYN ++D + G
Sbjct: 6 CEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAM 65
Query: 270 -MIKEM-----ESVLS---------------------RMKSNQCKPDIITFNLLIDSYGK 302
+ +EM V+S R ++C P++IT+++LID K
Sbjct: 66 ALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLIDGLCK 125
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ ++ +S+ P + T+ ++ K A V ++M P+ +T
Sbjct: 126 ANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVT 185
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDM-------KVSTLNAMLEAYCMNGLPTEAD 415
Y + ++G C RAR + D L+ L +DM V T +++ C G +A
Sbjct: 186 YNSL--LHGLC----RARRVSDALA-LMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ + + G TPD Y +L KA+ + LL+R GI P+ + T+
Sbjct: 239 AMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPD-------VVTY 291
Query: 476 SSSLAG 481
SS + G
Sbjct: 292 SSVIYG 297
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 95/201 (47%), Gaps = 9/201 (4%)
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
M+ + C+P+++T+N LID K D+ +++F+ + + P++ T+N+++ +
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
+A +FQ+M + + I++ ++T + A E F ++ V T +
Sbjct: 61 LERAMALFQEMLD-RRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSP-NVITYSV 118
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+++ C ++A L E+ G +PD TY +L K + ++L+ M G
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178
Query: 461 IVPNKRFFLEALETFSSSLAG 481
VPN L T++S L G
Sbjct: 179 CVPN-------LVTYNSLLHG 192
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 156/331 (47%), Gaps = 4/331 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+S LI+ G+ G A+ +F+ M+ G RP+ YNA+I A + K +AK +F
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAK---FF 327
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M+ +P+ +T+N LL C++ + LF E+ + D+++YN ++DA K
Sbjct: 328 DEMQ-RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICK 386
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + +L++M + P++++++ +ID + K FD+ +F + + +
Sbjct: 387 GGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N+++ Y K +A + ++M ++ +TY ++ YG +++F E+
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ + T + +++ Y GL EA +F + G+ D Y L A K +
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVG 566
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
L+ M + GI PN + ++ F S
Sbjct: 567 SAVSLIDEMTKEGISPNVVTYNSIIDAFGRS 597
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 166/361 (45%), Gaps = 11/361 (3%)
Query: 105 KVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTG-IYSKLIAVMGKKGQTRL 163
K+ S+ C + ELG ++ + + + + K+ + G + S +I+ +G+ G+ +
Sbjct: 192 KLCGSDDCTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTI 251
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK--GMERCKPNIV 221
A +F G ++ALI+A+ ++ +A+ F MK G+ +PN+V
Sbjct: 252 AKRIFETAFAGGYGNTVYAFSALISAY----GRSGLHEEAISVFNSMKEYGL---RPNLV 304
Query: 222 TYNILLRACAQAR-NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSR 280
TYN ++ AC + QV F E+ + + PD T+N ++ + G+ + ++
Sbjct: 305 TYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDE 364
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
M + + + D+ ++N L+D+ K D ++ + + P + +++++I + KA
Sbjct: 365 MTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGR 424
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
+A +F +M + ++Y ++++Y A +I E++ +G V T NA
Sbjct: 425 FDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNA 484
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+L Y G E +F V P+ TY L Y+K + + ++ + + G
Sbjct: 485 LLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAG 544
Query: 461 I 461
+
Sbjct: 545 L 545
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 152/353 (43%), Gaps = 27/353 (7%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
W +F M +R D Y+ L+ + K GQ LA + ++M P+ Y+
Sbjct: 355 WEAARNLFDEMTNRR-IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
+I KA +AL F +M+ + + V+YN LL + ++ + +
Sbjct: 414 TVIDGFA----KAGRFDEALNLFGEMRYLG-IALDRVSYNTLLSIYTKVGRSEEALDILR 468
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
E+ + D+ TYN ++ YGK G E++ V + MK P+++T++ LID Y K
Sbjct: 469 EMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGG 528
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
+ + ++F+ + + + ++++I K L G A + +MT +P+ +TY
Sbjct: 529 LYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYN 588
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL-----NAMLEAY-------------- 405
II +G + R+ + + S +S L N +++ +
Sbjct: 589 SIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKD 648
Query: 406 CMNGLPTEADLL--FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
C G+ + +L F H + + P+ T+ + A ++ N E LL+ +
Sbjct: 649 CEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEEL 701
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 140/317 (44%), Gaps = 5/317 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I ++ K G++ A + EM + PD VY LI H K + A +F
Sbjct: 331 YNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLI----HGFFKLGHVRTANKWF 386
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M ++ P+ +TY L++ Q V + LF E+ L PD TY ++D Y K
Sbjct: 387 DEMLS-KKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCK 445
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + S+ + M P+I+T+ LID K D ++ + + +
Sbjct: 446 AGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCI 505
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+NSM+ KA +A + ++M P ITY +I Y ++ +A ++ E+
Sbjct: 506 YNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEML 565
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G V T N ++ +CM G+ + D L G+ PD+ TY L K + N
Sbjct: 566 DRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMN 625
Query: 448 LVQKLLKRMEQNGIVPN 464
K+ KRM G+ P+
Sbjct: 626 TTTKIYKRMRNQGVAPD 642
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 148/323 (45%), Gaps = 11/323 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
+T Y+ +I + + G+ + A L +M PD Y+ +I + H + KAL K
Sbjct: 257 NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKAL-KL 315
Query: 204 LGYFQKMKGMERCKPNIVTYN-ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
+ Q +KG+ KPN TYN I+L C ++ + L +E+ + PD Y ++
Sbjct: 316 MDDMQ-IKGL---KPNRYTYNSIILLLCKIGKSFEAEKVL-REMMSQKIIPDNVVYTTLI 370
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+ K G ++ M S + PD IT+ LI +G+ + + +F ++ K
Sbjct: 371 HGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLK 430
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAR 380
P T+ ++I Y KA A + +M M TP+ +TY +I G C + + A
Sbjct: 431 PDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALID--GLCKHGELDTAN 488
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
E+ DE+ K G + V N+M+ C G +A L + G+ PD+ TY + AY
Sbjct: 489 ELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAY 548
Query: 441 TKANMKELVQKLLKRMEQNGIVP 463
+ + KLL+ M G+ P
Sbjct: 549 CRLGDIDKAHKLLQEMLDRGLQP 571
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 143/346 (41%), Gaps = 55/346 (15%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI G+ G+ LF EM + G +PD Y LI + KA + A
Sbjct: 397 DYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYC----KAGEMVNA 452
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+M M PNIVTY L+ + +D N L E+ + L ++ YN +++
Sbjct: 453 FSLHNEMVQMGM-TPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVN 511
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K G I++ ++ M+ PD IT+ +ID+Y + DK ++ + ++ +P
Sbjct: 512 GICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQP 571
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T+ TFN ++ + + + + M P ITY
Sbjct: 572 TVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITY-------------------- 611
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
N +++ +C+ +++ N GV PDS+TY +L K + KA
Sbjct: 612 ---------------NTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKA 656
Query: 444 -NMKELVQKLLKRMEQNGIVPN--------KRFF-----LEALETF 475
N+KE L K M + G VP KRF+ LEA E F
Sbjct: 657 RNLKE-AWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELF 701
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 113/258 (43%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P++V+Y+ ++ + + L ++ L P+ YTYN ++ K G E E V
Sbjct: 291 PDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKV 350
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L M S + PD + + LI + K + F ++ K P T+ ++I +G+
Sbjct: 351 LREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQ 410
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
+ + +F +M + P +TY +I +Y + A + +E+ ++G + T
Sbjct: 411 GGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVT 470
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
A+++ C +G A+ L + G+ + Y + KA E KL+K ME
Sbjct: 471 YGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEME 530
Query: 458 QNGIVPNKRFFLEALETF 475
GI P+ + ++ +
Sbjct: 531 VAGIDPDAITYTTVIDAY 548
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 99/232 (42%)
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
A N + + K E ++ + +YN ++ + + G +KE +L +M PD+++
Sbjct: 236 ANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVS 295
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
++ +ID Y K ++ + KP T+NS+I+ K +AE V ++M
Sbjct: 296 YSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMM 355
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ K P + Y +I + +V A + FDE+ T +++ + G
Sbjct: 356 SQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVI 415
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
E LF + G+ PD TY L Y KA L M Q G+ PN
Sbjct: 416 EPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPN 467
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 9/137 (6%)
Query: 162 RLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV 221
RL W+ + G PD YN L+ H R+ K +++M+ + P+
Sbjct: 594 RLLGWMLEK----GIVPDAITYNTLMKQHC-IRNSMNTTTKI---YKRMRN-QGVAPDSN 644
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
TYNIL++ +ARN+ + L+KE+ E P + +YN ++ + K I E + M
Sbjct: 645 TYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEM 704
Query: 282 KSNQCKPDIITFNLLID 298
+ + D +N +D
Sbjct: 705 RGHGLVADGEIYNFFVD 721
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 22/181 (12%)
Query: 94 EPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIA 153
+P V T N V+ + C L E G D+ L WM ++ + D Y+ L+
Sbjct: 570 QPTVVTFN----VLMNGFCMLGMLEDG--DRLLG------WML-EKGIVPDAITYNTLMK 616
Query: 154 VMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--K 211
+ ++ MRN G PD + YN LI H KA+ L +A +++M K
Sbjct: 617 QHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHC----KARNLKEAWFLYKEMIEK 672
Query: 212 GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMI 271
G P + +YN L++ + + + + LF+E+ L D YN +D + G +
Sbjct: 673 GY---VPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDV 729
Query: 272 K 272
+
Sbjct: 730 E 730
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 94/473 (19%), Positives = 164/473 (34%), Gaps = 80/473 (16%)
Query: 11 LRLSTLSSSSASSSSSSSSSSFNQSSSQNYNFTHRHIPLS--LRTRPRTGICCVWTRPRS 68
R S L SS S+S + F S+ + + +P S L+TRP P+
Sbjct: 14 FRFSCLQVSSNSASRCNFLPFF---LSRRWLTQSQRVPSSFLLQTRPFPD-----YSPKK 65
Query: 69 KRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQC 128
R +E + V L RS EPL R L + R +H L++ + + +
Sbjct: 66 PTIRDTELIHDITAVIKLRRS----EPLHRILKAHESNFRYDH--LIWVLMNIKNDYNLV 119
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L F W + +R + IAV+ RLA L V++ +
Sbjct: 120 LAFFDWARVRREPSLEARCIIIHIAVVSN--DLRLAHEL--------------VHDYFLN 163
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
+ L K L Y K G PN + ++I + + ++ + L +L
Sbjct: 164 SKLEIGVKMTQFTHRLIYTYKYWG-----PNPIAFDIFFQVLVEIGHLSEARKLLDKLL- 217
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
+YG + + LSR+ +N +
Sbjct: 218 ---------------SYGLVVTVDSCNAFLSRIANNS---------------------EG 241
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY---TPSFITYEC 365
+E K ++N II Y RL GK + + + M + TP ++Y
Sbjct: 242 IEMAIKVFCEYGISWNTTSYN--IIIYSLCRL-GKVKEAHRLLMQMDFRSSTPDVVSYST 298
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+I Y + + +A ++ D++ G T N+++ C G EA+ + +
Sbjct: 299 VIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQK 358
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ PD+ Y L + K K M I P+ + ++ F
Sbjct: 359 IIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQG 411
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 174/432 (40%), Gaps = 56/432 (12%)
Query: 74 SEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFR 133
EEL S +L+ + + + + LNK V C +GK D Q ++V
Sbjct: 225 GEELPSPDLLALAEKVYEEMLASSCVLNK-VNTANFARCLC---GMGKFDMAFQIIKVMM 280
Query: 134 WMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI------ 187
+ ++ DT YSK+I + + + A LF EM++ G PD Y LI
Sbjct: 281 ----GKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKA 336
Query: 188 -------------------------TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVT 222
TA LH KAK L +A F +M C PN +T
Sbjct: 337 GLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMID-AGCPPNTIT 395
Query: 223 YNILLRACAQARNVDQVNALFKEL----------------HESILAPDIYTYNGVMDAYG 266
Y+ L+ +A + + ++ +L H +AP++ TY ++D
Sbjct: 396 YSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLC 455
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K + + + +L M SN C+P+ I ++ LID + K D ++VF + PT+
Sbjct: 456 KAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVH 515
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T+ S+I K R A V +M TP+ +TY +I +A ++ +
Sbjct: 516 TYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMM 575
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
+ G V T A+++ +G + LF G P+ TY++L A +
Sbjct: 576 EEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLL 635
Query: 447 ELVQKLLKRMEQ 458
+ LL M+Q
Sbjct: 636 DEAHSLLSEMKQ 647
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 151/391 (38%), Gaps = 71/391 (18%)
Query: 130 EVFRWMQKQRW--YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
E ++ + R I + Y L+ KK Q + + M GC P+PS++N+L+
Sbjct: 125 EAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLV 184
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERC--KPNIVTYNILLRACAQARNVDQVN--ALF 243
++ + RD A ++ +K M C P V YNI + + + + AL
Sbjct: 185 HSYCNARDYPYA-------YKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALA 237
Query: 244 KELHESILA---------------------------------------PDIYTYNGVMDA 264
++++E +LA PD TY+ V+
Sbjct: 238 EKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITF 297
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ +++ + MKS PD+ T+ +LIDS+ K ++ F +
Sbjct: 298 LCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSAN 357
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ T+ +++ Y KA+ +A +F +M P+ ITY ++ + +A E++
Sbjct: 358 VVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYT 417
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+L +G V + D FE H + P+ TY L KA+
Sbjct: 418 KL--IGTSDNVGS-----------------DFYFEGKHTDSIAPNVVTYGALIDGLCKAH 458
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
Q+LL M NG PN + ++ F
Sbjct: 459 KVVDAQELLDAMLSNGCEPNHIIYDALIDGF 489
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 138/336 (41%), Gaps = 47/336 (13%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + K + A L M ++GC P+ +Y+ALI K + A F
Sbjct: 447 YGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFC----KVGKIDNAQEVF 502
Query: 208 QKMKGMERCK--PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M +C P + TY L+ A + R +D + ++ ES P++ TY ++D
Sbjct: 503 LRMS---KCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGL 559
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ G ++ +LS M+ C P+++T+ LID GK D Q+F + P
Sbjct: 560 CRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNY 619
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC-------------------- 365
T+ +I + A L +A + +M Y P ++ C
Sbjct: 620 VTYRVLINHCCAAGLLDEAHSLLSEMK-QTYWPKYLQGYCSVVQGFSKKFIASLGLLEEL 678
Query: 366 -------IITMYGY-CDNVSRAR------EIFDELSKLGKDMKVSTLN---AMLEAYCMN 408
I +YG DN S+A E+ E+ +L + +++ + ++++A C+
Sbjct: 679 ESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLA 738
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+A L+ GV P+ S + L K K N
Sbjct: 739 SQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVN 774
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 141/346 (40%), Gaps = 31/346 (8%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM 171
CF + L K +W L M ++ + DT + +++I+ + + A+ M
Sbjct: 80 CFA--QALCKEGRWSDAL----VMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRM 133
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGM---ERCKPNIVTYNILLR 228
R + C P+ Y L+T L K LG+ +++ M E C PN +N L+
Sbjct: 134 RCNSCIPNVVTYRTLLTGFLKK--------KQLGWCKRIINMMMKEGCNPNPSLFNSLVH 185
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN------GMIKEMESVLSRMK 282
+ AR+ L K + + P YN + + ++ E V M
Sbjct: 186 SYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEML 245
Query: 283 SNQC---KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
++ C K + F + GK FD Q+ K +M P T++ +I +A
Sbjct: 246 ASSCVLNKVNTANFARCLCGMGK---FDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAM 302
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLN 399
KA +FQ+M ++ P TY +I + + +AR FDE+ +G V T
Sbjct: 303 KVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYT 362
Query: 400 AMLEAYC-MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
A+L AY LP +D +F + G P++ TY L KA
Sbjct: 363 ALLHAYLKAKQLPQASD-IFNRMIDAGCPPNTITYSALVDGLCKAG 407
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 137/322 (42%), Gaps = 28/322 (8%)
Query: 170 EMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA 229
E+++ G RP + YNAL+ A + ++M C
Sbjct: 30 ELKDFGYRPSGATYNALV----QVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQAL 85
Query: 230 CAQARNVDQVNALFKELH--ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
C + R D + + +E +++L + + G+M+A + E S L RM+ N C
Sbjct: 86 CKEGRWSDALVMIEREDFKLDTVLCTQMIS--GLMEA----SLFDEAISFLHRMRCNSCI 139
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P+++T+ L+ + K++ +++ +M P FNS++ +Y AR A +
Sbjct: 140 PNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKL 199
Query: 348 FQKMTAMKYTPSFITYECIITMYGYC--------DNVSRAREIFDELSKLGKDMKVSTLN 399
++M P ++ Y I + C D ++ A ++++E+ L ++ +N
Sbjct: 200 LKRMADCGCPPGYVAYN--IFIGSICGGEELPSPDLLALAEKVYEEM--LASSCVLNKVN 255
Query: 400 AMLEAYCMNGLPTEADLLFENSHNM---GVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
A C+ G+ + D+ F+ M G PD+STY + +A E L + M
Sbjct: 256 TANFARCLCGM-GKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEM 314
Query: 457 EQNGIVPNKRFFLEALETFSSS 478
+ G+ P+ + +++F +
Sbjct: 315 KSVGVNPDVYTYTILIDSFCKA 336
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 171/357 (47%), Gaps = 11/357 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L + K + L + ++R+++ D Y LI + K G+TR A+ L ++
Sbjct: 129 LLRGLCLNGKVKEALNFHDHVIRKRFHL-DQVSYGTLINGLCKSGETRAALQLLRKIEGL 187
Query: 175 G-CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
RPD +Y A+I + K K + A + +M +++ PN+VT+N L+
Sbjct: 188 LLVRPDVIMYTAIIDSFC----KDKLVIDAYDLYSEMI-VKKIYPNVVTFNSLIYGFCIV 242
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ + L E+ + + P++YT+N ++D K G +K+ SVLS M +P+++T+
Sbjct: 243 GQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTY 302
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
L+D Y + +K + VF ++ P + +++ MI K ++ +A +F++M
Sbjct: 303 TSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHL 362
Query: 354 MKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
TP+ +TY +I G C + +S ++ DE++ G+ + T N++L C N
Sbjct: 363 KNMTPNTVTYSSLID--GLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQV 420
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+A L + G+ PD STY L K + Q++ + + G N R +
Sbjct: 421 DKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMY 477
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 128/300 (42%), Gaps = 9/300 (3%)
Query: 159 GQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKP 218
GQ + A+ L +EM + P+ +N LI L + K L K +G+E P
Sbjct: 243 GQLKEAVGLLNEMSLNNVNPNVYTFNILIDG-LCKEGEVKKATSVLSVMIK-QGVE---P 297
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
N+VTY L+ + V++ +F + + P++++Y+ +++ KN M+ E +
Sbjct: 298 NVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLF 357
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
M P+ +T++ LID K + + + + + + T+NS++ K
Sbjct: 358 KEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKN 417
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVS 396
KA + KM P TY ++ G C N + A+ I+ +L G + +
Sbjct: 418 HQVDKAIALLTKMKDEGIQPDMSTYTTLVD--GLCKNGRLKDAQRIYQDLLCKGYPLNIR 475
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
M+ C G EA L + G PD+ TY+ L A K N KLL+ M
Sbjct: 476 MYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREM 535
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 92/207 (44%), Gaps = 7/207 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS +I + K A+ LF EM P+ Y++LI K+ ++
Sbjct: 337 YSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLC----KSGRISDVWDLI 392
Query: 208 QKMKGMERCKP-NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
++ R +P NI+TYN LL + VD+ AL ++ + + PD+ TY ++D
Sbjct: 393 DEIN--NRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLC 450
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
KNG +K+ + + + +I + ++I+ K FD+ + + + P
Sbjct: 451 KNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAV 510
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTA 353
T+ ++I K GKA + ++M A
Sbjct: 511 TYETLISALFKNNKNGKAVKLLREMIA 537
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/303 (17%), Positives = 120/303 (39%), Gaps = 40/303 (13%)
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L A+ F + M P I +N +L + + + + +++ + P+++T+N
Sbjct: 33 LDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFN 92
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY---GK-RQAFDKMEQVFKS 315
+++ + + S+++++ +PD +T N L+ GK ++A + + V +
Sbjct: 93 ILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRK 152
Query: 316 LMHSKE--------------------------------KPTLPTFNSMIINYGKARLQGK 343
H + +P + + ++I ++ K +L
Sbjct: 153 RFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVID 212
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAM 401
A ++ +M K P+ +T+ +I YG+C + A + +E+S + V T N +
Sbjct: 213 AYDLYSEMIVKKIYPNVVTFNSLI--YGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNIL 270
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
++ C G +A + GV P+ TY L Y + + + G+
Sbjct: 271 IDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGV 330
Query: 462 VPN 464
PN
Sbjct: 331 TPN 333
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 153/348 (43%), Gaps = 13/348 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
LF GK D + L R + D IY+ +I + G A+ + EM
Sbjct: 244 LFARRGKMDHAMAYLREMRCFG----LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGC 299
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQA 233
GC PD YN L+ K + L A G +M+ ER P++ T+ L+
Sbjct: 300 GCLPDVVTYNTLLNGLC----KERRLLDAEGLLNEMR--ERGVPPDLCTFTTLIHGYCIE 353
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+D+ LF + L PDI TYN ++D + G + + + M S + P+ +T+
Sbjct: 354 GKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTY 413
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
++LIDS+ ++ + +++ P + T+NS+I Y ++ K + QKM
Sbjct: 414 SILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMV 473
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
K +P ITY +I Y D + A ++ + + K V T N ++ + ++G E
Sbjct: 474 NKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQE 533
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAY-TKANMKELVQKLLKRMEQNG 460
A +FE G+ PD TY + + T N KE Q L M Q G
Sbjct: 534 AGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQ-LHDEMLQRG 580
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 163/354 (46%), Gaps = 14/354 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIA-DTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+ + L +S W + EVF+ M + +A D ++ LI + G+ A+ ++ EMR+
Sbjct: 171 VLKGLCRSGMWDKAWEVFKEMDD--FGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRH 228
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERC---KPNIVTYNILLRAC 230
G +PD ++ LI R K + A+ Y ++M RC P+ V Y +++
Sbjct: 229 RGIKPDLVSFSCLI-GLFARRGK---MDHAMAYLREM----RCFGLVPDGVIYTMVIGGF 280
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
+A + + E+ PD+ TYN +++ K + + E +L+ M+ PD+
Sbjct: 281 CRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDL 340
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
TF LI Y DK Q+F ++++ + +P + T+N++I + KA ++
Sbjct: 341 CTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDD 400
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M + + P+ +TY +I + V A DE+ G + T N++++ YC +G
Sbjct: 401 MHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGN 460
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
++ + V+PD TY L Y K + KLL ME+ + P+
Sbjct: 461 VSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPD 514
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 162/352 (46%), Gaps = 18/352 (5%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ L++++ M + R D +S LI + ++G+ AM EMR G PD +Y +
Sbjct: 218 EALKIYKEM-RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 276
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I +A ++ AL +M G C P++VTYN LL + R + L E+
Sbjct: 277 IGGFC----RAGLMSDALRVRDEMVGCG-CLPDVVTYNTLLNGLCKERRLLDAEGLLNEM 331
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
E + PD+ T+ ++ Y G + + + M + + +PDI+T+N LID ++
Sbjct: 332 RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDL 391
Query: 307 DKMEQVFKSLMHSKEK-PTLPTFNSMIINYGKARLQGKAEYVF---QKMTAMKYTPSFIT 362
DK ++ MHS+E P T++ +I ++ + +G+ E F +M P+ +T
Sbjct: 392 DKANDLWDD-MHSREIFPNHVTYSILIDSHCE---KGQVEDAFGFLDEMINKGILPNIMT 447
Query: 363 YECIITMYGYCDNVSRAREIFDEL--SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
Y II Y NVS+ ++ ++ +K+ D+ T N ++ Y +A L
Sbjct: 448 YNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDL--ITYNTLIHGYIKEDKMHDAFKLLNM 505
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
V PD TY +L ++ + + ++M GI P++ ++ +
Sbjct: 506 MEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 557
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 122/259 (47%), Gaps = 11/259 (4%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
++R D ++ LI +G+ A+ LF M N RPD YN LI D
Sbjct: 332 RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD- 390
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
L KA + M E PN VTY+IL+ + + V+ E+ + P+I
Sbjct: 391 ---LDKANDLWDDMHSRE-IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIM 446
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TYN ++ Y ++G + + + L +M N+ PD+IT+N LI Y K DKM FK L
Sbjct: 447 TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKE---DKMHDAFKLL 503
Query: 317 -MHSKEK--PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
M KEK P + T+N +I + +A ++F+KM A P TY +I +
Sbjct: 504 NMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTA 563
Query: 374 DNVSRAREIFDELSKLGKD 392
N A ++ DE+ + GK+
Sbjct: 564 GNSKEAFQLHDEMLQRGKE 582
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 108/251 (43%), Gaps = 3/251 (1%)
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCK-PNIVTYNILLRACAQARNVDQVNALFKELHES 249
+H KA K +M+ +RC P++VT+N+++ A +A + + AL +
Sbjct: 102 VHNYCKALEFDKVDAVISEME--KRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSK 159
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
L P I TYN V+ ++GM + V M PD+ +F +LI + + ++
Sbjct: 160 GLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEA 219
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
+++K + H KP L +F+ +I + + A ++M P + Y +I
Sbjct: 220 LKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGG 279
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
+ +S A + DE+ G V T N +L C +A+ L GV PD
Sbjct: 280 FCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPD 339
Query: 430 SSTYKLLYKAY 440
T+ L Y
Sbjct: 340 LCTFTTLIHGY 350
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/209 (19%), Positives = 92/209 (44%)
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
YT N ++ Y K ++++V+S M+ PD++T N+++D+ + + + S
Sbjct: 96 YTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDS 155
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
++ KP + T+NS++ ++ + KA VF++M P ++ +I +
Sbjct: 156 MVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGE 215
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+ A +I+ E+ G + + + ++ + G A G+ PD Y +
Sbjct: 216 IEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTM 275
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ + +A + ++ M G +P+
Sbjct: 276 VIGGFCRAGLMSDALRVRDEMVGCGCLPD 304
>gi|357444525|ref|XP_003592540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481588|gb|AES62791.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 507
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 183/400 (45%), Gaps = 14/400 (3%)
Query: 72 RKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEV 131
K ++ + R+L S + + P+ +L + V E + +L S+ + L
Sbjct: 51 HKPNNPHAETICRIL--STTPESPVDVSLRNFPVEVSPELVVAVLNKL--SNAGILALSF 106
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
FRW +KQ+ + +T I+ LI +GK Q ++ L EM+ + N + +
Sbjct: 107 FRWAEKQQGFNHNTEIFHALIEALGKIRQFKMIWNLVDEMKQR------KLLNGDTFSLI 160
Query: 192 HTR-DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHES 249
R +AK + +AL F++M+ KP I +N L+ C +V++ LF ++ +
Sbjct: 161 ARRYVRAKVIKEALKTFERMEKYG-LKPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQW 219
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
L P++ +Y +++ + + + +++ V MK + +PD++T+ ++I++Y K + +D+
Sbjct: 220 NLEPNLKSYTILIEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEA 279
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
++ ++ P+ + + I G +A F+K A + P TY +++
Sbjct: 280 IGIYHDMLSKNVNPSPHIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSA 339
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN-SHNMGVTP 428
Y + + A I E+ +LG T + +L G EA +F+ S G P
Sbjct: 340 YCWSMRIDDAYRIVGEMKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEP 399
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
STY ++ + + N ++ + M+ GI+P F
Sbjct: 400 SVSTYAIMVRMFCNENQLDMAMVVWNEMKDKGILPGIHMF 439
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 67/155 (43%), Gaps = 6/155 (3%)
Query: 109 SEHCFLLF-EELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWL 167
S H + F LG + + E F K + + Y+ +++ + A +
Sbjct: 294 SPHIYCTFITGLGNGSRMDEAFEFFE-KSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRI 352
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
EM+ G P+ Y+ +I HL + K +A FQ+M C+P++ TY I++
Sbjct: 353 VGEMKELGIGPNARTYD-IILVHLIKGGRTK---EAYSVFQRMSSETGCEPSVSTYAIMV 408
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
R +D ++ E+ + + P I+ ++ ++
Sbjct: 409 RMFCNENQLDMAMVVWNEMKDKGILPGIHMFSTLI 443
>gi|168012346|ref|XP_001758863.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690000|gb|EDQ76369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 367
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 164/354 (46%), Gaps = 9/354 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYS--KLIAVMGKKGQTRLAMWLFSEM 171
L+ LG++ +Q E+F M + G++S +I +KG + A ++ +M
Sbjct: 15 LVLGVLGRAGLTIQARELFDEMLSSG---VEVGLHSFNSMIGAYARKGLFKKAWRMYEDM 71
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
SG + D + L++ T+ + K F K+K P + TYN LL +
Sbjct: 72 VESGIQADEITLSTLLSGVGKTQLPVETAEK---IFSKIK-ENGILPRVETYNTLLSVLS 127
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ + ++ L E+ + P+I T+N ++ + + G +KE V R+ KP ++
Sbjct: 128 RGGHTERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDAGLKPTVV 187
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
T+ L+ Y + + +VF + KP L ++ MI YGKA +A VF+++
Sbjct: 188 TYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAEEAALVFRQL 247
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
Y P+ +T+ C+I +G+ + F+E+ G ++ N M+ AY G
Sbjct: 248 QNDGYIPNVVTWCCLIQAFGWQGKMQEIGAFFNEMLASGCLPDLTLYNVMMGAYGRYGHS 307
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+A +LF G++P++ +Y + +AY + Q +L +M + G P++
Sbjct: 308 VQAAILFRRMQAQGISPNAVSYDTMIQAYCHSKQAADAQIVLDQMTRAGFSPDR 361
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 159/350 (45%), Gaps = 10/350 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ ++ V+G+ G T A LF EM +SG +N++I A+ + KA +
Sbjct: 13 YTLVLGVLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAY----ARKGLFKKAWRMY 68
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQAR-NVDQVNALFKELHESILAPDIYTYNGVMDA 264
+ M G++ + +T + LL + + V+ +F ++ E+ + P + TYN ++
Sbjct: 69 EDMVESGIQ---ADEITLSTLLSGVGKTQLPVETAEKIFSKIKENGILPRVETYNTLLSV 125
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ G + + + M+ + P+IITFN L+ + + + +V++ ++ + KPT
Sbjct: 126 LSRGGHTERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDAGLKPT 185
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ T+ ++ Y +A +A VF +M + P + Y +I++YG + A +F
Sbjct: 186 VVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAEEAALVFR 245
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+L G V T +++A+ G E F G PD + Y ++ AY +
Sbjct: 246 QLQNDGYIPNVVTWCCLIQAFGWQGKMQEIGAFFNEMLASGCLPDLTLYNVMMGAYGRYG 305
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTRS 494
L +RM+ GI PN + ++ + S + + +TR+
Sbjct: 306 HSVQAAILFRRMQAQGISPNAVSYDTMIQAYCHSKQAADAQIVLDQMTRA 355
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 116/251 (46%), Gaps = 1/251 (0%)
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
R KPN TY ++L +A Q LF E+ S + ++++N ++ AY + G+ K+
Sbjct: 5 RLKPNGHTYTLVLGVLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAYARKGLFKKA 64
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQ-AFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
+ M + + D IT + L+ GK Q + E++F + + P + T+N+++
Sbjct: 65 WRMYEDMVESGIQADEITLSTLLSGVGKTQLPVETAEKIFSKIKENGILPRVETYNTLLS 124
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
+ + + + +M ++ P+ IT+ ++ M+ + A E++ + G
Sbjct: 125 VLSRGGHTERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDAGLKP 184
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
V T +++ YC EA +F +G PD Y L+ Y KA E +
Sbjct: 185 TVVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAEEAALVF 244
Query: 454 KRMEQNGIVPN 464
++++ +G +PN
Sbjct: 245 RQLQNDGYIPN 255
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 89/221 (40%), Gaps = 38/221 (17%)
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
++ + KP+ T+ L++ G+ + ++F ++ S + L +FNSMI Y + L
Sbjct: 1 VQKGRLKPNGHTYTLVLGVLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAYARKGL 60
Query: 341 QGK------------------------------------AEYVFQKMTAMKYTPSFITYE 364
K AE +F K+ P TY
Sbjct: 61 FKKAWRMYEDMVESGIQADEITLSTLLSGVGKTQLPVETAEKIFSKIKENGILPRVETYN 120
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
++++ + R +E+ E+ +L + T N +L + G EA +++ +
Sbjct: 121 TLLSVLSRGGHTERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDA 180
Query: 425 GVTPDSSTYKLLYKAYTKAN-MKELVQKLLKRMEQNGIVPN 464
G+ P TY L + Y +A+ KE ++ L+ M + G P+
Sbjct: 181 GLKPTVVTYTGLVQMYCRASKHKEAIEVFLE-MRRVGCKPD 220
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 159/358 (44%), Gaps = 44/358 (12%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y ++ + K+G T LA L ++M P +YN +I K K + A
Sbjct: 15 DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC----KYKHMDDA 70
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
L F++M KG+ +PN+VTY+ L+ + L ++ E + PD++T++ +
Sbjct: 71 LNLFKEMETKGI---RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 127
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+DA+ K G + E E + M P I+T++ LI+ + D+ +Q+F+ ++
Sbjct: 128 IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 187
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P + T+N++I + K + + VF++M+ + +TY +I + A+E
Sbjct: 188 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 247
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE-----------NSHNM------ 424
IF E+ G + T N +L+ C NG +A ++FE ++N+
Sbjct: 248 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 307
Query: 425 ------------------GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
GV PD Y + + + KE L K M+++G +PN
Sbjct: 308 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPN 365
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 140/318 (44%), Gaps = 7/318 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS LI+ + G+ A L S+M PD ++ALI A + K L +A +
Sbjct: 89 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV----KEGKLVEAEKLY 144
Query: 208 QKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+M ++R P+IVTY+ L+ +D+ +F+ + PD+ TYN ++ +
Sbjct: 145 DEM--VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 202
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K ++E V M + +T+N+LI + D +++FK ++ P +
Sbjct: 203 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 262
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T+N+++ K KA VF+ + K P+ TY +I V ++F L
Sbjct: 263 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 322
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
S G V N M+ +C G EAD LF+ G P+S Y L +A + +
Sbjct: 323 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDR 382
Query: 447 ELVQKLLKRMEQNGIVPN 464
E +L+K M G +
Sbjct: 383 EASAELIKEMRSCGFAGD 400
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 118/249 (47%)
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
C+P++VTY +++ + + D L ++ + L P + YN ++D K + +
Sbjct: 12 CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 71
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
++ M++ +P+++T++ LI + ++ ++ K P + TF+++I +
Sbjct: 72 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 131
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
K +AE ++ +M PS +TY +I + D + A+++F+ + V
Sbjct: 132 VKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDV 191
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
T N +++ +C E +F G+ ++ TY +L + +A ++ Q++ K
Sbjct: 192 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 251
Query: 456 MEQNGIVPN 464
M +G+ PN
Sbjct: 252 MVSDGVPPN 260
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 16/234 (6%)
Query: 109 SEHCF-------LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQT 161
S+HCF L + K + + +EVFR M QR + +T Y+ LI + + G
Sbjct: 184 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS-QRGLVGNTVTYNILIQGLFQAGDC 242
Query: 162 RLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV 221
+A +F EM + G P+ YN L+ KA+ Y Q+ K ME P I
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV-VFEYLQRSK-ME---PTIY 297
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
TYNI++ +A V+ LF L + PD+ YN ++ + + G +E +++ M
Sbjct: 298 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 357
Query: 282 KSNQCKPDIITFNLLIDSY---GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
K + P+ +N LI + G R+A ++ + +S + + T+ +M+
Sbjct: 358 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 411
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 96/224 (42%), Gaps = 35/224 (15%)
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
+++ RM + C+PD++T+ ++++ KR D + + K +P + +N++I
Sbjct: 2 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 61
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITM---YGYCDNVSR-------------- 378
K + A +F++M P+ +TY +I+ YG + SR
Sbjct: 62 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 121
Query: 379 ------------------AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
A +++DE+ K D + T ++++ +CM+ EA +FE
Sbjct: 122 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 181
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ PD TY L K + K E ++ + M Q G+V N
Sbjct: 182 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 225
>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 152/349 (43%), Gaps = 42/349 (12%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
Q L F W + Y ++I + GK G A+ F+ M + GC+PD ++ +
Sbjct: 128 QTLAFFNWATNLEEFGHSPEPYMEMIDLAGKAGLAAEAVHAFNRMEDYGCKPDKIAFSVV 187
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I+ + K + +A +F +K +R +P++V Y L+ +A N+ + +F E+
Sbjct: 188 IS----SLSKKRRAIEAQSFFDSLK--DRFEPDVVVYTSLVHGWCRAGNISEAERVFGEM 241
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
+ + P++YTY+ V+DA ++G I V S M C P+ ITFN L+ + K
Sbjct: 242 KMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRT 301
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+K+ Q V+ +M + P ITY +
Sbjct: 302 EKVLQ-----------------------------------VYNQMKRLGCPPDAITYNFL 326
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I + DN+ A +I + + K G ++ S+ N + G A +F ++
Sbjct: 327 IESHCRDDNLEEAVKILNSVKK-GCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKC 385
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
P++ TY +L + + ++V KL K M++N I PN + + TF
Sbjct: 386 RPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTF 434
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 32/202 (15%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA------ 201
++ L+ V K G+T + ++++M+ GC PD YN LI +H + +A+
Sbjct: 288 FNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVK 347
Query: 202 ------------------------KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
A F KMK + +C+PN VTYNIL+R A ++ D
Sbjct: 348 KGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDL-KCRPNTVTYNILMRMFADKKSTD 406
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC-KPDIITFNLL 296
V L KE+ E+ + P+ TY ++ + G S M +C +P + + ++
Sbjct: 407 MVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMV 466
Query: 297 IDSYGKRQAFDKMEQVFKSLMH 318
+ K K E++ + +++
Sbjct: 467 LQQLRKAGQLKKHEELVEKMVN 488
>gi|410110099|gb|AFV61129.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
trifolia]
Length = 440
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 143/308 (46%), Gaps = 7/308 (2%)
Query: 134 WMQK--QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
W+QK Q D +YS LI + K A+ +FS ++ SG PD YNA+I
Sbjct: 37 WLQKMEQDRVPGDLVLYSNLIELSRKXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVF- 95
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KAK +A +MK PN +Y+ LL + + + ++F E+ E
Sbjct: 96 ---GKAKLFREARSLIGEMK-XAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIKC 151
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
D+ T N ++D YG+ GM KE + + M+ +P+++++N L+ YG + F +
Sbjct: 152 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 211
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+F+ + + + T+NSM++ YGK KA + Q+M + P+ ITY II+++G
Sbjct: 212 LFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWG 271
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ RA +F +L G ++ M+ AY GL A L P +
Sbjct: 272 KVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDT 331
Query: 432 TYKLLYKA 439
+L A
Sbjct: 332 AIHILAGA 339
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 139/302 (46%), Gaps = 5/302 (1%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
LF EMR PD Y+ LIT H K AL + QKM+ +R ++V Y+ L
Sbjct: 2 LFDEMRQRALSPDRYTYSTLIT-HF---GKEGLFDAALSWLQKME-QDRVPGDLVLYSNL 56
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+ + + + ++F L S PD+ YN +++ +GK + +E S++ MK
Sbjct: 57 IELSRKXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKXAGV 116
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
P+ +++ L+ Y + + F + VF + K L T N MI YG+ + +A+
Sbjct: 117 MPNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADK 176
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+F M M P+ ++Y ++ +YG + A +F + + + V T N+M+ Y
Sbjct: 177 LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYG 236
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
+A+ L + + G+ P+S TY + + K + L +++ +G ++
Sbjct: 237 KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQI 296
Query: 467 FF 468
F
Sbjct: 297 LF 298
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 111/224 (49%)
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
LF E+ + L+PD YTY+ ++ +GK G+ S L +M+ ++ D++ ++ LI+
Sbjct: 1 GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELS 60
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
K + K +F L S P L +N+MI +GKA+L +A + +M P+
Sbjct: 61 RKXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKXAGVMPNT 120
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
+Y ++TMY A +F E+ ++ + ++T N M++ Y G+ EAD LF
Sbjct: 121 ASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWG 180
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
MG+ P+ +Y L + Y A + L + M++ I N
Sbjct: 181 MRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 224
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 153/327 (46%), Gaps = 5/327 (1%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
+QR D YS LI GK+G A+ +M D +Y+ LI D
Sbjct: 7 RQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKXCDY 66
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+KA++ F ++K P++V YN ++ +A+ + +L E+ + + P+
Sbjct: 67 SKAIS----IFSRLK-RSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKXAGVMPNTA 121
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+Y+ ++ Y +N E SV S M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 122 SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 181
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P + ++N+++ YG A L G+A ++F+ M + +TY ++ +YG
Sbjct: 182 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEH 241
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A + E+ G + T + ++ + G A +LF+ + G D ++ +
Sbjct: 242 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTM 301
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVP 463
AY +A + ++LL +++ +P
Sbjct: 302 IVAYERAGLVAHAKRLLHELKRPDNIP 328
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 146/360 (40%), Gaps = 42/360 (11%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L EM+ +G P+ + Y+ L+T ++
Sbjct: 77 KRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKXAGVMPNTASYSTLLTMYVEN--- 133
Query: 197 AKALAKALGYFQKMK--------------------------------GMER--CKPNIVT 222
K +AL F +M+ GM + +PN+V+
Sbjct: 134 -KKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 192
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
YN LLR A + LF+ + + ++ TYN +M YGK ++ +++ M+
Sbjct: 193 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQ 252
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
S +P+ IT++ +I +GK D+ +F+ L S + F +MI+ Y +A L
Sbjct: 253 SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGLVA 312
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
A+ + ++ P I + I + + A +F + G+ ++ M+
Sbjct: 313 HAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMI 368
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+ +F+ +G PDS + AY K + + M++ G V
Sbjct: 369 HLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAXVLNAYGKLQEFDKANDVYMEMQEVGCV 428
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 159/361 (44%), Gaps = 20/361 (5%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L D+ + L++F M + + ++ L+ + ++G+ A+ L M
Sbjct: 153 LLHGLCVEDRVSEALDLFHQMCR-----PNVVTFTTLMNGLCREGRVVEAVALLDRMVED 207
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G +P+ Y ++ D AL +KM+ M KPN+V Y+ ++ +
Sbjct: 208 GLQPNQITYGTIVDGMCKIGDTVSAL----NLLRKMEEMSHIKPNVVIYSAIIDGLWKDG 263
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ L+ E+ E + PD++TYN ++D + +G E + +L M + P+++T++
Sbjct: 264 RHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYS 323
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
LI++Y K + F + E+++ ++ P T+NSMI + K AE++F M
Sbjct: 324 ALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATK 383
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+P T+ +I Y + E+ E+++ G +T N ++ +C+ G A
Sbjct: 384 GCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAA 443
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ-----------NGIVP 463
L + + GV PD T L + ++ K M++ NG+ P
Sbjct: 444 LDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEP 503
Query: 464 N 464
+
Sbjct: 504 D 504
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 150/356 (42%), Gaps = 34/356 (9%)
Query: 133 RWMQKQRWYI--------ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
RW + QR + YS LI K+ + A L+ EM G P+ YN
Sbjct: 299 RWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYN 358
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
++I +++ A A+ + Y KG C P++ T+N L+ A+ +D L
Sbjct: 359 SMIDGFCK-QNRLDA-AEHMFYVMATKG---CSPDVFTFNTLIDGYCGAKRIDDGTELLH 413
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
E+ E+ L D TYN ++ + G + + +M S+ PDI+T N L+D
Sbjct: 414 EMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 473
Query: 305 AFDKMEQVFKSLMHSK-----------EKPTLPTFNSMI---INYGKARLQGKAEYVFQK 350
++FK++ SK +P + T+N +I IN GK +AE ++++
Sbjct: 474 KLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFL---EAEELYKE 530
Query: 351 MTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
M P+ ITY +I G C + A ++FD + V T N ++ YC
Sbjct: 531 MPHRGIVPNTITYSSMIN--GLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKA 588
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G + LF G+ D+ TY L + K + + M +G+ P+
Sbjct: 589 GRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPD 644
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 145/324 (44%), Gaps = 14/324 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +S L+ + + + A+ LF +M CRP+ + L+ + + +A
Sbjct: 146 DVVTFSTLLHGLCVEDRVSEALDLFHQM----CRPNVVTFTTLMNGLC----REGRVVEA 197
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
+ +M + +PN +TY ++ C V +N L K S + P++ Y+ ++
Sbjct: 198 VALLDRMV-EDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAII 256
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D K+G + ++ + M+ PD+ T+N +ID + + + +++ + ++ K
Sbjct: 257 DGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKIN 316
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAR 380
P + T++++I Y K R +AE ++ +M P+ ITY +I G+C + + A
Sbjct: 317 PNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMID--GFCKQNRLDAAE 374
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+F ++ G V T N +++ YC + L G+ D++TY L +
Sbjct: 375 HMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGF 434
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
L ++M +G+ P+
Sbjct: 435 CLVGDLNAALDLSQQMISSGVCPD 458
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 148/346 (42%), Gaps = 22/346 (6%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
K K+ + E++ M R I +T Y+ +I K+ + A +F M GC PD
Sbjct: 331 KERKFFEAEELYDEMLP-RGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDV 389
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQ 238
+N LI + AK + +M G+ + TYN L+ +++
Sbjct: 390 FTFNTLIDGYC----GAKRIDDGTELLHEMTETGL---VADTTTYNTLIHGFCLVGDLNA 442
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS-----------NQCK 287
L +++ S + PDI T N ++D NG +K+ + M+ N +
Sbjct: 443 ALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVE 502
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
PD+ T+N+LI F + E+++K + H P T++SMI K +A +
Sbjct: 503 PDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQM 562
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F M + ++P +T+ +++ Y V E+F E+ + G T ++ +
Sbjct: 563 FDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRK 622
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYK-LLYKAYTKANMKELVQKL 452
G A +F+ + GV PD+ T + +L ++K +K V L
Sbjct: 623 VGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAML 668
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 137/313 (43%), Gaps = 10/313 (3%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ LFS+M S RP PSV + + R + L +L +QKM+ ++ ++ ++
Sbjct: 61 AIDLFSDMVRS--RPLPSVIDFNKLMGVVVRMERPDLVISL--YQKME-RKQIPCDVYSF 115
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
NIL++ + + F ++ + PD+ T++ ++ + E + +M
Sbjct: 116 NILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM-- 173
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
C+P+++TF L++ + + + ++ +P T+ +++ K
Sbjct: 174 --CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVS 231
Query: 344 AEYVFQKMTAMKYT-PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
A + +KM M + P+ + Y II S A ++ E+ + G + T N M+
Sbjct: 232 ALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMI 291
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+ +C +G +EA L + + P+ TY L AY K ++L M GI+
Sbjct: 292 DGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGII 351
Query: 463 PNKRFFLEALETF 475
PN + ++ F
Sbjct: 352 PNTITYNSMIDGF 364
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 15/192 (7%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYI----------ADTGIYSKLIAVMGKKGQT 161
C L + L + K LE+F+ MQK + + D Y+ LI+ + +G+
Sbjct: 462 CNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKF 521
Query: 162 RLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV 221
A L+ EM + G P+ Y+++I K L +A F M G + P++V
Sbjct: 522 LEAEELYKEMPHRGIVPNTITYSSMINGLC----KQSRLDEATQMFDSM-GSKSFSPDVV 576
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
T+N L+ +A VD LF E+ + D TY ++ + K G I + M
Sbjct: 577 TFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEM 636
Query: 282 KSNQCKPDIITF 293
S+ PD IT
Sbjct: 637 ISSGVYPDTITI 648
>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 583
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 146/355 (41%), Gaps = 39/355 (10%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D+ + + +I + G+ AM +F +M+ GC+P S YN LI A ++
Sbjct: 91 DSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGF----GIAGRPYES 146
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ + M E KPN TYNIL++A + +++ + ++ S + PD+ TYN +
Sbjct: 147 MKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMAR 206
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ---------------AFDK 308
AY +NG + E ++ +M N KP+ T ++I Y K D
Sbjct: 207 AYAQNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDP 266
Query: 309 MEQVFKSLMHS--------------------KEKPTLPTFNSMIINYGKARLQGKAEYVF 348
VF SL+ KP + TF++++ + A L E +F
Sbjct: 267 NPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIF 326
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
M P Y + Y +A + +SK G V ++ +C
Sbjct: 327 NDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAA 386
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
G A L E H MG +P+ TY+ L Y +A ++LL ME+ G+VP
Sbjct: 387 GKMDRAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVP 441
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 151/322 (46%), Gaps = 6/322 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+A + ++ + + L S++ ++G +PD + NA+I A ++ + +A+ F
Sbjct: 60 YTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAF----SESGKVDEAMKIF 115
Query: 208 QKMKGMERCKPNIVTYNILLRACAQA-RNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
QKMK CKP TYN L++ A R + + L + + P+ TYN ++ A+
Sbjct: 116 QKMKEY-GCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWC 174
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
++E +VL +M ++ +PD++T+N + +Y + ++ E++ + ++ KP
Sbjct: 175 TKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAERLILKMPYNIVKPNER 234
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T +I Y K +A +M + P+ + + +I Y + + E +
Sbjct: 235 TCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLM 294
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
+ G V T + ++ A+ GL + +F + G+ PD Y +L K Y +A
Sbjct: 295 EEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQP 354
Query: 447 ELVQKLLKRMEQNGIVPNKRFF 468
+ LL M + G+ PN F
Sbjct: 355 RKAEALLTSMSKYGVQPNVVIF 376
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 161/379 (42%), Gaps = 45/379 (11%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM-RNS 174
F E GK D + +++F+ M K+ T Y+ LI G G+ +M L M ++
Sbjct: 102 FSESGKVD---EAMKIFQKM-KEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDE 157
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
+P+ YN LI A K L +A KM +P++VTYN + RA AQ
Sbjct: 158 NVKPNDRTYNILIQAWC----TKKKLEEAWNVLHKMVA-SGIQPDVVTYNTMARAYAQNG 212
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE--------------------- 273
++ L ++ +I+ P+ T ++ Y K G + E
Sbjct: 213 ETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFN 272
Query: 274 --------------MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
++ L+ M+ KPD++TF+ +++++ + E++F ++ +
Sbjct: 273 SLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKA 332
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
+P + ++ + Y +A KAE + M+ P+ + + II+ + + RA
Sbjct: 333 GIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRA 392
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+ +++ ++G + T ++ Y P +A+ L GV P+ ST +L+ A
Sbjct: 393 FRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQLVADA 452
Query: 440 YTKANMKELVQKLLKRMEQ 458
+ + + ++L E+
Sbjct: 453 WRAIGLFKEANRILNGSEE 471
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 112/266 (42%), Gaps = 1/266 (0%)
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
E KP ++TY L+ A + + + AL ++ ++ + PD N +++A+ ++G + E
Sbjct: 51 EGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSESGKVDE 110
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYG-KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
+ +MK CKP T+N LI +G + ++ M+ + KP T+N +I
Sbjct: 111 AMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDENVKPNDRTYNILI 170
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKD 392
+ + +A V KM A P +TY + Y RA + ++
Sbjct: 171 QAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAERLILKMPYNIVK 230
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
T ++ YC G EA +GV P+ + L K Y V +
Sbjct: 231 PNERTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEA 290
Query: 453 LKRMEQNGIVPNKRFFLEALETFSSS 478
L ME+ GI P+ F + +SS+
Sbjct: 291 LTLMEEFGIKPDVVTFSTIMNAWSSA 316
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 111/234 (47%), Gaps = 5/234 (2%)
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ A+F L E P + TY ++ A + K + ++LS++ N KPD I N +I
Sbjct: 40 EAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMI 99
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK-Y 356
+++ + D+ ++F+ + KPT T+N++I +G A ++ + + M +
Sbjct: 100 NAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDENV 159
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD- 415
P+ TY +I + + A + ++ G V T N M AY NG A+
Sbjct: 160 KPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAER 219
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTK-ANMKELVQKLLKRMEQNGIVPNKRFF 468
L+ + +N+ V P+ T ++ Y K NM E + + L RM++ G+ PN F
Sbjct: 220 LILKMPYNI-VKPNERTCGIIISGYCKEGNMPEAL-RFLYRMKELGVDPNPVVF 271
>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
Length = 1153
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 169/346 (48%), Gaps = 16/346 (4%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
L+ + +GKS + + L V M + + Y + Y+ +I+ + K + A+ L+ + +
Sbjct: 813 LILDAMGKSMRIEEMLRVQAEMHR-KGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMS 871
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME-RCKPNIVTYNILLRACAQ 232
G P P Y L+ L KA + A F +M +E CKPN YNILL
Sbjct: 872 EGFSPTPCTYGPLLDGLL----KAGKMVDAENLFNEM--LEYGCKPNCTIYNILLNGHRI 925
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
A N + V +F+++ E + PDI +Y ++D G + + S ++ +PD+I
Sbjct: 926 AGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLII 985
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+NLLID GK + ++ +F + P L T+NS+I++ GKA +A +++++
Sbjct: 986 YNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELL 1045
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ P+ TY +I Y + A +D ++ +G +K + ++ +++ +N
Sbjct: 1046 IKGWKPNVFTYNALIRGYSVSGSTDNAYAAYDCVA-VGVSLKTALISGLVDENLIN---- 1100
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
A+ LF G PD TY L+ A K+ M+ ++++LK E+
Sbjct: 1101 IAEGLFAEMKRRGCGPDQFTYNLILDAIGKS-MR--IEEMLKVQEE 1143
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 153/337 (45%), Gaps = 5/337 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS L+ GKK +WL +EM G +P+ Y T + +A +A
Sbjct: 216 YSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSY----TICIRVLGQAARFDEAYQIL 271
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
KM+ CKP++VT+ ++++ A + +F ++ S PD TY ++D G
Sbjct: 272 GKMED-SGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGD 330
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+G + + + + M ++ +I+++ ++D+ + D+ VF + P +
Sbjct: 331 SGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYS 390
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+NS+I + KA + +A +F M A +P+ T+ I YG +A + ++ +
Sbjct: 391 YNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMK 450
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G V+ NA+L + +G A +F +MGV+PD+ TY ++ K +KA+ +
Sbjct: 451 SKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKAD 510
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQS 484
M + G VP+ ++T G+++
Sbjct: 511 EAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEA 547
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 168/377 (44%), Gaps = 10/377 (2%)
Query: 106 VVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAM 165
V +E C + E + + +VF MQKQ A+ G ++ + + +G +G R A
Sbjct: 105 VHTTESCNYMLELMRAHGRVGDMAQVFDLMQKQ-IVKANVGTFATVFSGVGVQGGLRSAP 163
Query: 166 WLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNI 225
MR +G + YN LI + K+ A+A+ ++ M + P++ TY++
Sbjct: 164 VALPVMREAGMSLNGYTYNGLI----YFLVKSGFDAEAMEVYKAMV-EDGISPSVRTYSV 218
Query: 226 LLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ 285
L+ + + R+VD V L E+ + P++Y+Y + G+ E +L +M+ +
Sbjct: 219 LMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSG 278
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
CKPD++T ++I + VF + S +KP T+ +++ G +
Sbjct: 279 CKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVM 338
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
++ M A Y + ++Y ++ + A +FDE+ + G + + N+++ +
Sbjct: 339 EIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGF 398
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+ A LF + + G +P+ T+ L Y K+ + + M+ GIVP+
Sbjct: 399 LKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPD- 457
Query: 466 RFFLEALETFSSSLAGS 482
+ A SSLA S
Sbjct: 458 ---VAAANAVLSSLARS 471
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 155/350 (44%), Gaps = 31/350 (8%)
Query: 95 PLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAV 154
PL+R L K+ K + + F F+ LG S K TG Y+ LI
Sbjct: 743 PLIRHLCKHKKALEAHQLFNKFKGLGVSLK--------------------TGSYNSLIRG 782
Query: 155 MGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KG 212
+ + +A LF+EM+ GC PD YN ++ A K+ + + L +M KG
Sbjct: 783 LVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDA----MGKSMRIEEMLRVQAEMHRKG 838
Query: 213 MERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIK 272
E VTYN ++ +++ ++Q L+ L +P TY ++D K G +
Sbjct: 839 YES---TYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMV 895
Query: 273 EMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
+ E++ + M CKP+ +N+L++ + + + Q+F+ ++ P + ++ +I
Sbjct: 896 DAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLI 955
Query: 333 INYGKA-RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGK 391
A RL Y F+++ + P I Y +I G + + A +F+E+ K G
Sbjct: 956 DTLCTAGRLNDGLSY-FRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGI 1014
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ T N+++ G +EA ++E G P+ TY L + Y+
Sbjct: 1015 VPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYS 1064
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 150/366 (40%), Gaps = 44/366 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ I V+G+ + A + +M +SGC+PD + +I A L+ A F
Sbjct: 251 YTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVI----QVLCDAGRLSDAKDVF 306
Query: 208 QKMKG-------------MERC---------------------KPNIVTYNILLRACAQA 233
KMK +++C NIV+Y ++ A Q
Sbjct: 307 WKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQV 366
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+D+ A+F E+ E ++P+ Y+YN ++ + K M + + M + P+ T
Sbjct: 367 GRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTH 426
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
L I+ YGK K Q ++ + P + N+++ + ++ G A+ VF ++
Sbjct: 427 VLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKD 486
Query: 354 MKYTPSFITYECIITMYGYCDNVSRARE---IFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M +P ITY +I C S+A E F ++ + G V LN++++ G
Sbjct: 487 MGVSPDTITYTMMIKC---CSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGK 543
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
EA LF M + P + TY L + + V LL+ M + PN +
Sbjct: 544 GNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNT 603
Query: 471 ALETFS 476
L+ S
Sbjct: 604 VLDCLS 609
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 116/269 (43%), Gaps = 1/269 (0%)
Query: 196 KAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
K K +A F K KG+ +YN L+R +D LF E+ PD
Sbjct: 750 KHKKALEAHQLFNKFKGL-GVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDE 808
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
+TYN ++DA GK+ I+EM V + M + +T+N +I K + ++ ++ +
Sbjct: 809 FTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYN 868
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
LM PT T+ ++ KA AE +F +M P+ Y ++ + N
Sbjct: 869 LMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGN 928
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+IF+++ + G + + + +++ C G + F +G+ PD Y L
Sbjct: 929 TENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNL 988
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L K+ E L M++ GIVPN
Sbjct: 989 LIDGLGKSERIEEAVCLFNEMKKKGIVPN 1017
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 136/321 (42%), Gaps = 10/321 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L ++ G S +E++ M Y + Y+ ++ + + G+ A+ +F EM+
Sbjct: 324 LLDKCGDSGDSQSVMEIWNAMVAD-GYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEK 382
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P+ YN+LI+ L KA +AL F M C P+ Y +L +
Sbjct: 383 GISPEQYSYNSLISGFL----KADMFDRALELFNHMNA---CGPSPNGYTHVLFINYYGK 435
Query: 235 NVDQVNAL--FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+ + A+ ++ + + PD+ N V+ + ++G + + V +K PD IT
Sbjct: 436 SGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTIT 495
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+ ++I K D+ F ++ + P + NS+I K +A +F ++
Sbjct: 496 YTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLK 555
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
MK P+ TY +++ G V + +E++ + T N +L+ NG
Sbjct: 556 EMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVN 615
Query: 413 EADLLFENSHNMGVTPDSSTY 433
A + + G TPD S+Y
Sbjct: 616 CAIGMLYSMTEKGCTPDLSSY 636
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 10/182 (5%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D IY+ LI +GK + A+ LF+EM+ G P+ YN+LI LH KA A
Sbjct: 982 DLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLI---LHLGKAGKASEAA 1038
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
Y + + ++ KPN+ TYN L+R + + + D A + +A + ++
Sbjct: 1039 QMYEELL--IKGWKPNVFTYNALIRGYSVSGSTDNAYAAY-----DCVAVGVSLKTALIS 1091
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+I E + + MK C PD T+NL++D+ GK ++M +V + + +
Sbjct: 1092 GLVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIGKSMRIEEMLKVQEEIAEDLNQL 1151
Query: 324 TL 325
TL
Sbjct: 1152 TL 1153
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/360 (19%), Positives = 138/360 (38%), Gaps = 60/360 (16%)
Query: 130 EVFR-WMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSE-MRNSGCRPDPSVYNALI 187
E FR + Q ++ D ++ K G + A+ E + + C D S +++L+
Sbjct: 651 EAFRMFCQMKKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLM 710
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL---------RACAQARNVDQ 238
L+ K++ A NI + ILL R + + +
Sbjct: 711 EGILNKAGVEKSIEFA--------------ENIASRGILLNDFFLCPLIRHLCKHKKALE 756
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+ LF + ++ +YN ++ +I E + + MK C PD T+NL++D
Sbjct: 757 AHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILD 816
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
+ GK ++M +V ++ MH K Y
Sbjct: 817 AMGKSMRIEEMLRV-QAEMHRK----------------------------------GYES 841
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+++TY II+ + +A +++ L G T +L+ G +A+ LF
Sbjct: 842 TYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLF 901
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
G P+ + Y +L + A E V ++ ++M + GI P+ + + ++T ++
Sbjct: 902 NEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTA 961
>gi|6633861|gb|AAF19720.1|AC008047_27 F2K11.2 [Arabidopsis thaliana]
Length = 332
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 143/311 (45%), Gaps = 7/311 (2%)
Query: 171 MRNSGCRPDPSVYNALITAHLHTRDKAKALAKA-----LGYFQKMKGMERCKPNIV-TYN 224
M +GCRP+ +N L+ + +ALA G+ G K ++V +
Sbjct: 1 MVETGCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTA 60
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
I+ R C +++ N LF E+HE + P++ TYN ++D++ +G + + +L M
Sbjct: 61 IVDRLCKDGNHINAQN-LFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEK 119
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
Q PDI+TF+ LI+++ K + + E+++K ++ PT T+NSMI + K A
Sbjct: 120 QINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDA 179
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
+ + M + +P +T+ +I Y V EIF E+ + G T ++
Sbjct: 180 KRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 239
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+C G A L + GV PD T+ + +L+ ++++ + P
Sbjct: 240 FCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEVCPR 299
Query: 465 KRFFLEALETF 475
FFL +L +F
Sbjct: 300 LIFFLFSLCSF 310
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 119/250 (47%), Gaps = 13/250 (5%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
AD I + ++ + K G A LF+EM G P+ YN +I + H+ + A
Sbjct: 53 ADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDA--- 109
Query: 203 ALGYFQKMKGM--ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
Q ++ M ++ P+IVT++ L+ A + R V + ++KE+ + P TYN
Sbjct: 110 ----DQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 165
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++D + K + + + +L M S C PD++TF+ LI+ Y K + D ++F +
Sbjct: 166 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 225
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSR 378
T+ ++I + + A+ + +M + P +IT+ C++ G C + +
Sbjct: 226 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLA--GLCSKKELRK 283
Query: 379 AREIFDELSK 388
A I ++L K
Sbjct: 284 AFAILEDLQK 293
>gi|302829725|ref|XP_002946429.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
gi|300268175|gb|EFJ52356.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
Length = 961
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 174/371 (46%), Gaps = 11/371 (2%)
Query: 71 GRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLE 130
G ++ ++L++++++ + +EP V + + + + S L +EL K + +E
Sbjct: 198 GLAFSDMTVEDLLKIVLK-LAPQEPAVDAIKQGLYYLDSSAMAALLKELAKQGYLKRAVE 256
Query: 131 VFRWMQK-----QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
+F W++ + + D Y+ +I+ G Q R A+ L +EMR+ G + Y+A
Sbjct: 257 IFDWLRNLEPSHELSSLCDLYTYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSA 316
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
L+ + KA L A +++M E C PN+VTYNIL+ + ++ +
Sbjct: 317 LMNVCI----KANELDLAQDVYKQMLE-EGCSPNLVTYNILIDVYVKRCQWEEAVKVLDT 371
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
L + + ++ TYN V+ A K+G ++ V +M + KP T+ LI +YGK+
Sbjct: 372 LEKQAIQAEVRTYNTVISACNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQ 431
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+K ++F+ ++ + + T++S+I KA A +F KM P+ +T+
Sbjct: 432 VEKALEIFRDMIRRGCERNVITYSSLISACEKAGRWEMALELFSKMHKENCKPNVVTFNS 491
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+I + + +A E+F+++ G T ++ AY G A FE G
Sbjct: 492 LIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLITAYERGGQWRRALKAFEQMQTQG 551
Query: 426 VTPDSSTYKLL 436
PD++ + L
Sbjct: 552 CHPDAAVFNSL 562
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 157/341 (46%), Gaps = 7/341 (2%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
K D L +F M+ Q + D Y++LI +GK G+ A F EM+ GCRPD
Sbjct: 277 KLDDVHGALSLFEEMRHQ-YCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDT 335
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN-VDQV 239
V N +I + KA L A+ FQ+M G RC P++VTYN +++A ++++ +V
Sbjct: 336 VVMNNMI----NFLGKAGRLDDAMKLFQEM-GTLRCIPSVVTYNTIIKALFESKSRASEV 390
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
+ F+ + ES ++P +TY+ ++D + K +++ +L M P + LID+
Sbjct: 391 PSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDA 450
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
GK + +D ++F+ L + + + MI + GKA A +F +M + P
Sbjct: 451 LGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPD 510
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
Y +++ + A + + G +++ N +L G P A +
Sbjct: 511 VYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLS 570
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
N V PD +Y + A + A M E KL++ M G
Sbjct: 571 NMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLG 611
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 152/350 (43%), Gaps = 10/350 (2%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
F +LG+ D Q L K+ T IY+ LI + K A+ LF EMR+
Sbjct: 240 FCKLGRRDSATQLLNEM----KENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQY 295
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
CRPD Y LI KA + +A +F +M+ E C+P+ V N ++ +A
Sbjct: 296 CRPDVFTYTELIRG----LGKAGRIDEAYHFFYEMQ-REGCRPDTVVMNNMINFLGKAGR 350
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDA-YGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+D LF+E+ P + TYN ++ A + E+ S RMK + P T++
Sbjct: 351 LDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYS 410
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+LID + K +K + + + P + S+I GKA+ A +FQ++
Sbjct: 411 ILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKEN 470
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ S Y +I G + A +FDE++KLG V NA++ G+ EA
Sbjct: 471 CGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEA 530
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G PD ++Y ++ K ++L M+Q+ + P+
Sbjct: 531 LSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPD 580
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 6/336 (1%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E++ M + DT YS LI+ K G+ A L +EM+ +G +P +Y LIT
Sbjct: 215 ELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITL 274
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
D + AL F++M+ + C+P++ TY L+R +A +D+ F E+
Sbjct: 275 FFKLDD----VHGALSLFEEMRH-QYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQRE 329
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS-YGKRQAFDK 308
PD N +++ GK G + + + M + +C P ++T+N +I + + + +
Sbjct: 330 GCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASE 389
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+ F+ + S P+ T++ +I + K KA + ++M + P Y +I
Sbjct: 390 VPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLID 449
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
G A E+F EL + M++ G +A +F+ + +G P
Sbjct: 450 ALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAP 509
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
D Y L + M + ++RM+++G +P+
Sbjct: 510 DVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPD 545
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 164/368 (44%), Gaps = 19/368 (5%)
Query: 104 VKVVRSEHCFLLFEELGKSDKWLQC-LEVFRWMQKQRWYIADTGIYSKLI---AVMGKKG 159
V ++R +H L E+ K+D + ++ FRW K+R Y DT Y LI V+ + G
Sbjct: 83 VLMLRVDH--WLVREVMKTDIGVNVKMQFFRWAAKRRNYEHDTSTYMALIRCLEVVEQYG 140
Query: 160 QTRLAMW-LFSEM-RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCK 217
+ MW + EM RN C P+ + ++ AK ++KA+ F ++K +C+
Sbjct: 141 E----MWKMIQEMVRNPICVVTPTELSEVV----RMLGNAKMVSKAIAIFYQIK-TRKCQ 191
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELH-ESILAPDIYTYNGVMDAYGKNGMIKEMES 276
P YN ++ +V+ L+ E+ E PD TY+ ++ A+ K G
Sbjct: 192 PTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQ 251
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+L+ MK N +P + +LI + K +F+ + H +P + T+ +I G
Sbjct: 252 LLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYTELIRGLG 311
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
KA +A + F +M P + +I G + A ++F E+ L V
Sbjct: 312 KAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVV 371
Query: 397 TLNAMLEA-YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
T N +++A + +E FE G++P S TY +L + K N E LL+
Sbjct: 372 TYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEE 431
Query: 456 MEQNGIVP 463
M++ G P
Sbjct: 432 MDEKGFPP 439
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 122/253 (48%), Gaps = 17/253 (6%)
Query: 130 EVFRWMQKQRWYIADTGI------YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
EV W ++ + ++GI YS LI K + AM L EM G P P+ Y
Sbjct: 389 EVPSWFERMK----ESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAY 444
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV-TYNILLRACAQARNVDQVNAL 242
+LI A KAK A FQ++K E C + Y ++++ +A +D +
Sbjct: 445 CSLIDA----LGKAKRYDLACELFQELK--ENCGSSSARVYAVMIKHLGKAGRLDDAINM 498
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
F E+++ APD+Y YN +M + GM+ E S + RM+ + C PDI ++N++++ K
Sbjct: 499 FDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAK 558
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ ++ ++ S +P + ++N+++ A + +A + ++M + + IT
Sbjct: 559 TGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLIT 618
Query: 363 YECIITMYGYCDN 375
Y I+ G D+
Sbjct: 619 YSSILEAIGKVDH 631
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 134/330 (40%), Gaps = 5/330 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L LGK+ + + F MQ++ DT + + +I +GK G+ AM LF EM
Sbjct: 306 LIRGLGKAGRIDEAYHFFYEMQREGCR-PDTVVMNNMINFLGKAGRLDDAMKLFQEMGTL 364
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
C P YN +I A ++ +A + +F++MK P+ TY+IL+ +
Sbjct: 365 RCIPSVVTYNTIIKALFESKSRASEVPS---WFERMKE-SGISPSSFTYSILIDGFCKTN 420
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+++ L +E+ E P Y ++DA GK + +K N +
Sbjct: 421 RMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYA 480
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++I GK D +F + P + +N+++ + + +A ++M
Sbjct: 481 VMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEH 540
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P +Y I+ RA E+ + + V + N +L A G+ EA
Sbjct: 541 GCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEA 600
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
L E + +G D TY + +A K +
Sbjct: 601 AKLMEEMNTLGFEYDLITYSSILEAIGKVD 630
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 74/188 (39%), Gaps = 35/188 (18%)
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN-YGKARLQGKAEYV 347
D T+ LI + + +M ++ + ++ + PT S ++ G A++ KA +
Sbjct: 122 DTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAI 181
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F ++ K P+ Y +I M + + E+++E+S E +C
Sbjct: 182 FYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMST--------------EGHCF 227
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
PD+ TY L A+ K ++ +LL M++NG+ P +
Sbjct: 228 --------------------PDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKI 267
Query: 468 FLEALETF 475
+ + F
Sbjct: 268 YTMLITLF 275
>gi|297743996|emb|CBI36966.3| unnamed protein product [Vitis vinifera]
Length = 730
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 152/320 (47%), Gaps = 17/320 (5%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN---SGCRPDPSVYNALITAHLHTR- 194
R+ D GI S L+ + + +L E+ N SG +P+ YNA+I A
Sbjct: 126 RFASDDKGIDSVLLNFESRLCGSDDYTFLLRELGNRGDSGLKPNLVTYNAVIDACGKGGV 185
Query: 195 --DKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
++A + + F +M +G+E+ +I TYN LL A + +D + E+
Sbjct: 186 DFNRAAEIFDEMNLFSEMLYRGIEQ---DIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKH 242
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
+ P++ TY+ V+D Y K G + E ++ + MK D +++N L+ Y K F++
Sbjct: 243 IMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEAL 302
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE---YVFQKMTAMKYTPSFITYECII 367
V K + S K T+N+++ YGK QGK E VF++M A + P+ +TY +I
Sbjct: 303 NVCKEMESSGIKKDAVTYNALLGGYGK---QGKYEEVKRVFEEMKAERIFPNLLTYSTLI 359
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
+Y A E+F E K G V +A+++A C NGL A + G+
Sbjct: 360 DVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIR 419
Query: 428 PDSSTYKLLYKAYTKANMKE 447
P+ TY + A+ ++ + E
Sbjct: 420 PNVVTYNSIIDAFGRSGIVE 439
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 136/278 (48%), Gaps = 20/278 (7%)
Query: 148 YSKLIAVMGKKGQ--TRLA-----MWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
Y+ +I GK G R A M LFSEM G D YN L+ A K +
Sbjct: 173 YNAVIDACGKGGVDFNRAAEIFDEMNLFSEMLYRGIEQDIFTYNTLLDAVC----KGGQM 228
Query: 201 AKALGYFQKMKGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
A FQ M M R PN+VTY+ ++ A+A +D+ LF E+ + + D +Y
Sbjct: 229 DLA---FQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSY 285
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N ++ Y K G +E +V M+S+ K D +T+N L+ YGK+ ++++++VF+ +
Sbjct: 286 NTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKA 345
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--V 376
+ P L T++++I Y K L +A VF++ + Y +I C N V
Sbjct: 346 ERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALID--ALCKNGLV 403
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
A DE++K G V T N++++A+ +G+ +A
Sbjct: 404 ESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGIVEDA 441
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 142/330 (43%), Gaps = 33/330 (10%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ L+ + K GQ LA + SEM P+ Y+ +I + KA L +A
Sbjct: 211 DIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYA----KAGRLDEA 266
Query: 204 LGYFQKMK----GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L F +MK G++R V+YN LL A+ ++ + KE+ S + D TYN
Sbjct: 267 LNLFNEMKFASIGLDR-----VSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYN 321
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
++ YGK G +E++ V MK+ + P+++T++ LID Y K + + +VF+ +
Sbjct: 322 ALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKA 381
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
K + ++++I K L A +MT P+ +TY II +G V A
Sbjct: 382 GLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGIVEDA 441
Query: 380 RE-------------IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
E IF +L+ E C+ +F H + +
Sbjct: 442 TESEVGDKEDNQIIKIFGQLAAEKTCHAKKENRGRQEILCILA-------VFHKMHELDI 494
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
P+ T+ + A ++ N E LL+ +
Sbjct: 495 KPNVVTFSAILNACSRCNSFEDASMLLEEL 524
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 94/232 (40%), Gaps = 46/232 (19%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + K + + +EVFR +K AD +YS LI + K G A+ EM
Sbjct: 358 LIDVYSKGGLYQEAMEVFREFKKAGLK-ADVVLYSALIDALCKNGLVESAVSFLDEMTKE 416
Query: 175 GCRPDPSVYNALI------------------------------------TAHLHTRDKAK 198
G RP+ YN++I T H ++ +
Sbjct: 417 GIRPNVVTYNSIIDAFGRSGIVEDATESEVGDKEDNQIIKIFGQLAAEKTCHAKKENRGR 476
Query: 199 -ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY- 256
+ L F KM ++ KPN+VT++ +L AC++ + + + L +EL + +Y
Sbjct: 477 QEILCILAVFHKMHELD-IKPNVVTFSAILNACSRCNSFEDASMLLEELR--LFDNQVYG 533
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID---SYGKRQA 305
+G++ YG N + + +S+ +K +N L D +G+R+
Sbjct: 534 VAHGLLMGYGDNVWV-QAQSLFDEVKQMDSSTASAFYNALTDMLWHFGQRRG 584
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 154/336 (45%), Gaps = 11/336 (3%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L + M Q + D ++ L+ + K G + A+ + M G PD YN++I+
Sbjct: 279 LNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVIS 338
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
K + +A+ +M + C PN VTYN L+ + V++ L + L
Sbjct: 339 GLC----KLGEVKEAVEVLDQMITRD-CSPNTVTYNTLISTLCKENQVEEATELARVLTS 393
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
+ PD+ T+N ++ + + M+S C+PD T+N+LIDS + D+
Sbjct: 394 KGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDE 453
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+ K + S ++ T+N++I + KA +AE +F +M + + +TY +I
Sbjct: 454 ALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLID 513
Query: 369 MYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG-LPTEADLLFENSHNMG 425
G C + V A ++ D++ G+ T N++L +C G + AD++ + N G
Sbjct: 514 --GLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN-G 570
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
PD TY L KA E+ KLL+ ++ GI
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 146/358 (40%), Gaps = 32/358 (8%)
Query: 140 WYI-ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
W I D ++ LI + + Q R A+ + +M + G PD + ++ ++ D
Sbjct: 183 WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDG 242
Query: 199 AL-------------------------------AKALGYFQKMKGMERCKPNIVTYNILL 227
AL AL + Q+M + P+ T+N L+
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
+A +V + + + PD+YTYN V+ K G +KE VL +M + C
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P+ +T+N LI + K ++ ++ + L P + TFNS+I R A +
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F++M + P TY +I + A + ++ G V T N +++ +C
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
EA+ +F+ GV+ +S TY L K+ E +L+ +M G P+K
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 152/323 (47%), Gaps = 9/323 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
+T Y+ LI+ + K+ Q A L + + G PD +N+LI TR+ A+
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME-- 421
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F++M+ + C+P+ TYN+L+ + +D+ + K++ S A + TYN ++D
Sbjct: 422 --LFEEMRS-KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ K +E E + M+ + + +T+N LID K + + Q+ ++ +KP
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T+NS++ ++ + KA + Q MT+ P +TY +I+ V A ++
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL 598
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF-ENSHNMGVTPDSSTYKLLYKAYTK 442
+ G ++ N +++ TEA LF E PD+ +Y+++++
Sbjct: 599 RSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCN 658
Query: 443 AN--MKELVQKLLKRMEQNGIVP 463
++E V L++ +E+ G VP
Sbjct: 659 GGGPIREAVDFLVELLEK-GFVP 680
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 128/331 (38%), Gaps = 44/331 (13%)
Query: 166 WLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNI 225
W+ E G +PD YN ++ +L + L + + G+ KP++ T+N+
Sbjct: 143 WMIDEF---GLKPDTHFYNRML--NLLVDGNSLKLVEISHAKMSVWGI---KPDVSTFNV 194
Query: 226 LLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ 285
L++A +A + + +++ L PD T+ VM Y + G + + +M
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 286 CK------------------------------------PDIITFNLLIDSYGKRQAFDKM 309
C PD TFN L++ K
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
++ ++ P + T+NS+I K +A V +M +P+ +TY +I+
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
+ V A E+ L+ G V T N++++ C+ A LFE + G PD
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
TY +L + + +LK+ME +G
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSG 465
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 103/251 (41%), Gaps = 37/251 (14%)
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
+P+ Y ++ G++G +M+ +L MKS++C+ TF +LI+SY + + D++
Sbjct: 79 FSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEIL 138
Query: 311 QVFKSLM-------------------------------HSKE-----KPTLPTFNSMIIN 334
V ++ H+K KP + TFN +I
Sbjct: 139 SVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKA 198
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
+A A + + M + P T+ ++ Y ++ A I +++ + G
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWS 258
Query: 395 VSTLNAMLEAYCMNGLPTEA-DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
++N ++ +C G +A + + E S+ G PD T+ L KA + +++
Sbjct: 259 NVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIM 318
Query: 454 KRMEQNGIVPN 464
M Q G P+
Sbjct: 319 DVMLQEGYDPD 329
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 142/320 (44%), Gaps = 9/320 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALG 205
Y+ L+ + +G + A+ + +MR +GC P+ YN L+ A D+A+ L +
Sbjct: 160 YNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMM- 218
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+ G+ KPN+VT+N ++ +A ++ +F E+ + LAPD +YN ++ Y
Sbjct: 219 ---REGGL---KPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGY 272
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G E SV + M PD++TF LI K ++ + + + +
Sbjct: 273 CKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNE 332
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
TF ++I + K A ++M + PS + Y +I Y + ARE+ E
Sbjct: 333 ITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVRE 392
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ G V T + +L AYC NG A L + GV PD+ TY L + +
Sbjct: 393 MEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKR 452
Query: 446 KELVQKLLKRMEQNGIVPNK 465
L K M G+ P++
Sbjct: 453 LGDAHVLFKNMISLGLQPDE 472
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 156/355 (43%), Gaps = 25/355 (7%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ L VF M + + + D ++ LI VM K G A+ L EMR G + + + AL
Sbjct: 280 EALSVFAEMTR-KGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTAL 338
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I K L AL ++M+ R +P++V YN L+ +D+ L +E+
Sbjct: 339 IDGFC----KKGFLDDALLAVREMRQC-RIQPSVVCYNALINGYCMVGRMDEARELVREM 393
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
+ PD+ TY+ ++ AY KNG + +M N PD IT++ LI + +
Sbjct: 394 EAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRL 453
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+FK+++ +P T+ S+I + K +A + +M P +TY +
Sbjct: 454 GDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVL 513
Query: 367 ITMYGYCDNVSRAREI---------------FDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
I A+ + +D L + ++ ++ ++ A+L+ +CM GL
Sbjct: 514 INGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLM 573
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN--MKELVQKLLKRMEQNGIVPN 464
EAD ++++ + D S Y +L + + MK L K+M Q G PN
Sbjct: 574 NEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKAL--SFHKQMLQCGFAPN 626
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 131/287 (45%), Gaps = 8/287 (2%)
Query: 180 PSV--YNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
PSV YNA++ A +L A +F M + PN+ TYNIL+RA +
Sbjct: 121 PSVLAYNAVLLAL-----SDASLPSARRFFDSMLS-DGVAPNVYTYNILVRALCGRGHRK 174
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ ++ +++ + P+ TYN ++ A+ + G + E ++ M+ KP+++TFN ++
Sbjct: 175 EALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVV 234
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+ K + +VF ++ P ++N+++ Y K +A VF +MT
Sbjct: 235 NGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIM 294
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P +T+ +I + N+ RA + E+ + G M T A+++ +C G +A L
Sbjct: 295 PDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLA 354
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ P Y L Y + ++L++ ME G+ P+
Sbjct: 355 VREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPD 401
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 143/318 (44%), Gaps = 9/318 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ ++ + K G+ A +F EM G PD YN L+ + K +AL F
Sbjct: 230 FNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYC----KVGCSHEALSVF 285
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M KG+ P++VT+ L+ +A N+++ L +E+ E L + T+ ++D +
Sbjct: 286 AEMTRKGI---MPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGF 342
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G + + + M+ + +P ++ +N LI+ Y D+ ++ + + KP +
Sbjct: 343 CKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDV 402
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+++++ Y K A + Q+M P ITY +I + + A +F
Sbjct: 403 VTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKN 462
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ LG T ++++ +C G A L + GV PD TY +L +K+
Sbjct: 463 MISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSAR 522
Query: 446 KELVQKLLKRMEQNGIVP 463
+ Q+LL ++ VP
Sbjct: 523 TKEAQRLLFKLYHEEPVP 540
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 111/258 (43%), Gaps = 36/258 (13%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+++ YN +L A + A ++ F + +AP++YTYN ++ A G KE SV
Sbjct: 121 PSVLAYNAVLLALSDA-SLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSV 179
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L M+ C P+ +T+N L+ ++ + D+ E++ + KP L TFNS++ K
Sbjct: 180 LRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICK 239
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
A G+ E AR++FDE+ K G +
Sbjct: 240 A---GRME--------------------------------DARKVFDEMVKEGLAPDGVS 264
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
N ++ YC G EA +F G+ PD T+ L KA E L++ M
Sbjct: 265 YNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMR 324
Query: 458 QNGIVPNKRFFLEALETF 475
+ G+ N+ F ++ F
Sbjct: 325 ERGLQMNEITFTALIDGF 342
>gi|212274769|ref|NP_001130292.1| uncharacterized protein LOC100191386 [Zea mays]
gi|194688764|gb|ACF78466.1| unknown [Zea mays]
Length = 510
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 168/379 (44%), Gaps = 55/379 (14%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT---RDKAKAL 200
D ++S LI + + G A+ LFS +R +G RPD YNA + A+ + RD + L
Sbjct: 44 DLILFSNLIHLALRGGDAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSDLLRDAKRML 103
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQ-ARNVDQVNALFKELHE-SILAPDIYTY 258
M + P+ TY+ +L A A+ R++ V+ LF + + + PDI +
Sbjct: 104 ------LHDMPA-DGVAPDAETYSPILAALARRGRHLAAVS-LFSHMRAVARVKPDISVF 155
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N +++AYG+ + +E + + M+ P ++T+N ++ YG F + +F LM
Sbjct: 156 NIILNAYGQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLF-DLMR 214
Query: 319 SKE----------KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
S KP + T+N+MI YGK+ KA + Q+M A+ P ITY I++
Sbjct: 215 STSDGNGGAGSSVKPNVVTYNTMITIYGKSLEDEKAGRLVQEMQAIGVQPDAITYSTILS 274
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA-----DL------- 416
++ + RA +F++L + G ++ M+ AY GL ++A DL
Sbjct: 275 IWVKAGKLDRAARLFEKLREAGTEIDPVLYQTMVVAYERAGLASQAKRLLRDLKDPEGIP 334
Query: 417 -------------------LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
LF + N G DSS ++ + Y K V ++ M
Sbjct: 335 KETAIKILASAGRLEEAAWLFRRAVNTGEIKDSSVHRAMMDLYAKNRRHRNVIEVFDEMR 394
Query: 458 QNGIVPNKRFFLEALETFS 476
+ G +P+ A+ +
Sbjct: 395 KLGQLPDSEIIATAMNAYG 413
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 155/340 (45%), Gaps = 16/340 (4%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
++R D YS L+A + + G A+ M + PD +++ LI L D
Sbjct: 2 RERGVTPDAFSYSTLLAALTRAGHLDHALTFLPLMEDDAVAPDLILFSNLIHLALRGGDA 61
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDI 255
KALA F +++ +P++ YN + A C D L ++ +APD
Sbjct: 62 PKALA----LFSRLRAAG-IRPDLKAYNAAVAAYCKSDLLRDAKRMLLHDMPADGVAPDA 116
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKS-NQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
TY+ ++ A + G S+ S M++ + KPDI FN+++++YG+ + +++F
Sbjct: 117 ETYSPILAALARRGRHLAAVSLFSHMRAVARVKPDISVFNIILNAYGQLDLAREADRLFW 176
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM---------TAMKYTPSFITYEC 365
S+ + P++ T+N+M+ YG A L G+A ++F M P+ +TY
Sbjct: 177 SMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMRSTSDGNGGAGSSVKPNVVTYNT 236
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+IT+YG +A + E+ +G T + +L + G A LFE G
Sbjct: 237 MITIYGKSLEDEKAGRLVQEMQAIGVQPDAITYSTILSIWVKAGKLDRAARLFEKLREAG 296
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
D Y+ + AY +A + ++LL+ ++ +P +
Sbjct: 297 TEIDPVLYQTMVVAYERAGLASQAKRLLRDLKDPEGIPKE 336
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 2/202 (0%)
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ E + PD ++Y+ ++ A + G + + L M+ + PD+I F+ LI +
Sbjct: 1 MRERGVTPDAFSYSTLLAALTRAGHLDHALTFLPLMEDDAVAPDLILFSNLIHLALRGGD 60
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE-YVFQKMTAMKYTPSFITYE 364
K +F L + +P L +N+ + Y K+ L A+ + M A P TY
Sbjct: 61 APKALALFSRLRAAGIRPDLKAYNAAVAAYCKSDLLRDAKRMLLHDMPADGVAPDAETYS 120
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGK-DMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
I+ A +F + + + +S N +L AY L EAD LF +
Sbjct: 121 PILAALARRGRHLAAVSLFSHMRAVARVKPDISVFNIILNAYGQLDLAREADRLFWSMRR 180
Query: 424 MGVTPDSSTYKLLYKAYTKANM 445
GV P TY + + Y A +
Sbjct: 181 AGVPPSVVTYNTMLRVYGDAGL 202
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 78/173 (45%), Gaps = 9/173 (5%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS ++++ K G+ A LF ++R +G DP +Y ++ A+ ++A ++A
Sbjct: 265 DAITYSTILSIWVKAGKLDRAARLFEKLREAGTEIDPVLYQTMVVAY----ERAGLASQA 320
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ +K P + ++ A A +++ LF+ + D + +MD
Sbjct: 321 KRLLRDLK-----DPEGIPKETAIKILASAGRLEEAAWLFRRAVNTGEIKDSSVHRAMMD 375
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
Y KN + + V M+ PD +++YGK + FDK +++++
Sbjct: 376 LYAKNRRHRNVIEVFDEMRKLGQLPDSEIIATAMNAYGKLKEFDKAAALYQAM 428
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 150/331 (45%), Gaps = 5/331 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +IA + + G+ A+ +F EM + G P+ YN +I H+ K L
Sbjct: 19 YNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHV----KGGDLEAGFRLR 74
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M + KPNIVTYN+LL +A +D+ L E+ + PD +TY+ + D +
Sbjct: 75 DQML-HDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + M S+ + T ++L++ K K EQV + L+H+ PT
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N++I Y + R A +F++M + P ITY +I + V++A ++ E+
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
K G D V T N +++AY G + + + G+ D ++ + KA+ K
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+L M + PN + + ++ + S
Sbjct: 314 EAVAILDDMIYKDVAPNAQVYNSIIDAYIES 344
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 169/382 (44%), Gaps = 10/382 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMG--KKGQTRLAMWLFSEM 171
+LF+ L ++ + L +F K+ + G Y+ I + G K G+ A + +
Sbjct: 126 ILFDGLTRTGESRTMLSLFAESLKKGVML---GAYTCSILLNGLCKDGKVAKAEQVLEML 182
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
++G P +YN LI + RD L A F++MK +P+ +TYN L+
Sbjct: 183 VHTGLVPTTVIYNTLINGYCQVRD----LRGAFCIFEQMKS-RHIRPDHITYNALINGLC 237
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ V + L E+ +S + P + T+N ++DAYG G +++ +VLS M+ K D+I
Sbjct: 238 KLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVI 297
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
+F ++ ++ K + + +++ P +NS+I Y ++ +A + +KM
Sbjct: 298 SFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKM 357
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+ S +TY ++ + A E+ L G V + N ++ A C G
Sbjct: 358 KNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDT 417
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
+A L + + G+ P TY L A A ++ L ++M + P+ +
Sbjct: 418 DKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIM 477
Query: 472 LETFSSSLAGSQSGSAKTDLTR 493
++ + S+ S K +++
Sbjct: 478 VDAYVRCENDSKVASLKKEMSE 499
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 155/350 (44%), Gaps = 6/350 (1%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM 171
C +L L K K + +V M + T IY+ LI + R A +F +M
Sbjct: 159 CSILLNGLCKDGKVAKAEQVLE-MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQM 217
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
++ RPD YNALI K + + KA +M+ P++ T+N L+ A
Sbjct: 218 KSRHIRPDHITYNALINGLC----KLEMVTKAEDLVMEME-KSGVDPSVETFNTLIDAYG 272
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
A +++ + ++ + + D+ ++ V+ A+ KNG I E ++L M P+
Sbjct: 273 TAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQ 332
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
+N +ID+Y + ++ + + + +S ++ T+N ++ ++ +AE + +
Sbjct: 333 VYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTL 392
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P ++Y II+ + +A E+ E++K G + T + ++ A G
Sbjct: 393 RNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRV 452
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ + L++ + V P SS Y ++ AY + V L K M + GI
Sbjct: 453 HDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI 502
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 141/337 (41%), Gaps = 9/337 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS L + + G++R + LF+E G Y I + +D A A+
Sbjct: 120 DGFTYSILFDGLTRTGESRTMLSLFAESLKKGVML--GAYTCSILLNGLCKDGKVAKAEQ 177
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ G+ P V YN L+ Q R++ +F+++ + PD TYN +++
Sbjct: 178 VLEMLVHTGL---VPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALIN 234
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K M+ + E ++ M+ + P + TFN LID+YG +K V + K
Sbjct: 235 GLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKS 294
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ +F S++ + K +A + M P+ Y II Y + +A +
Sbjct: 295 DVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLV 354
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+++ G + T N +L+ C + EA+ L N G+ PD +Y + A
Sbjct: 355 EKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNK 414
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLA 480
+ +LL+ M + GI P R + T S+LA
Sbjct: 415 GDTDKALELLQEMNKYGIRPTLRTY----HTLVSALA 447
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 112/263 (42%), Gaps = 4/263 (1%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+ +YN+++ ++ +F E+ + + P+ TYN ++D + K G ++ +
Sbjct: 14 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
+M + KP+I+T+N+L+ + D+ + + P T++ I+ G
Sbjct: 74 RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYS--ILFDGL 131
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKV 395
R + ++K Y C I + G C + V++A ++ + L G
Sbjct: 132 TRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTT 191
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
N ++ YC A +FE + + PD TY L K M + L+
Sbjct: 192 VIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVME 251
Query: 456 MEQNGIVPNKRFFLEALETFSSS 478
ME++G+ P+ F ++ + ++
Sbjct: 252 MEKSGVDPSVETFNTLIDAYGTA 274
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 157/321 (48%), Gaps = 13/321 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ ++ + K G+ A +F EM G PD YN L++ + KA L +AL F
Sbjct: 228 FNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYC----KAGCLHEALAVF 283
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M KG+ P++VT+ L+ A +A N+++ AL ++ E L + +T+ ++D +
Sbjct: 284 AEMAQKGV---VPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGF 340
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+NG + + + M+ + +P ++ +N+LI+ Y K D+ ++ + KP +
Sbjct: 341 CRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDV 400
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIF 383
T+++++ Y K A + +KM P ITY +I G C+ + A E+F
Sbjct: 401 VTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIR--GLCEERRLGDACELF 458
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+++ +LG T +++ +C G +A L + GV PD TY +L +K+
Sbjct: 459 EKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKS 518
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+ Q+LL ++ VP+
Sbjct: 519 ARTKEAQRLLFKLYYEDPVPD 539
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 127/265 (47%), Gaps = 8/265 (3%)
Query: 218 PNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
PN+ TYNIL+RA CA+ + + + + ++ + AP++ TYN ++ A+ + G + E
Sbjct: 152 PNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAER 211
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
++ M+ +P ++TFN +++ K + ++F + P ++N+++ Y
Sbjct: 212 LVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYC 271
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
KA +A VF +M P +T+ +I N+ RA + ++ + G M
Sbjct: 272 KAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEF 331
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
T A+++ +C NG +A L + + P Y +L Y K + ++L+ M
Sbjct: 332 TFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEM 391
Query: 457 EQNGIVPNKRFFLEALETFSSSLAG 481
E G+ P+ + T+S+ L+G
Sbjct: 392 EAKGMKPD-------VVTYSTILSG 409
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 139/317 (43%), Gaps = 5/317 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+A + G+ A L MR G RP +N ++ KA + A F
Sbjct: 193 YNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLC----KAGRMEDARKMF 248
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M E P+ V+YN L+ +A + + A+F E+ + + PD+ T+ ++ A +
Sbjct: 249 DEM-AREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCR 307
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G ++ +++ +M+ + + TF LID + + D K + + +P++
Sbjct: 308 AGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVC 367
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N +I Y K +A + +M A P +TY I++ Y + A E+ ++
Sbjct: 368 YNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKML 427
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
K G T ++++ C +A LFE +G+ PD TY L + K +
Sbjct: 428 KKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQ 487
Query: 448 LVQKLLKRMEQNGIVPN 464
L M + G++P+
Sbjct: 488 KALSLHDEMIKKGVLPD 504
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/433 (21%), Positives = 172/433 (39%), Gaps = 51/433 (11%)
Query: 73 KSEELESKELVRVLMRSFSDKEPLVR---TLNKYVKVVRSEHCFLLFEELG--------- 120
++ E+++ E + +MR + LV +N K R E +F+E+
Sbjct: 202 RAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGV 261
Query: 121 ----------KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSE 170
K+ + L VF M Q+ + D ++ LI M + G A+ L +
Sbjct: 262 SYNTLVSGYCKAGCLHEALAVFAEM-AQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQ 320
Query: 171 MRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCK--PNIVTYNILLR 228
MR G R + + ALI AL MK M C+ P++V YN+L+
Sbjct: 321 MRERGLRMNEFTFTALIDGFCRNGFLDDALL-------AMKEMRECRIQPSVVCYNVLIN 373
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
+ +D+ L E+ + PD+ TY+ ++ Y K G + +M P
Sbjct: 374 GYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVP 433
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
D IT++ LI + + ++F+ ++ +P T+ ++I + K KA +
Sbjct: 434 DAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLH 493
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREI---------------FDELSKLGKDM 393
+M P +TY +I A+ + ++ L +
Sbjct: 494 DEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTA 553
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN--MKELVQK 451
+ ++ A+L+ + M GL +AD ++++ + D S Y +L + + MK L
Sbjct: 554 EFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKAL--S 611
Query: 452 LLKRMEQNGIVPN 464
K++ + G PN
Sbjct: 612 FHKQLLRCGFSPN 624
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 134/308 (43%), Gaps = 28/308 (9%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI K G+ A L EM G +PD Y+ +++ + D A
Sbjct: 368 YNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFE----LN 423
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+KM KG+ P+ +TY+ L+R + R + LF+++ + L PD +TY ++D +
Sbjct: 424 RKMLKKGV---VPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGH 480
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV------------- 312
K G +++ S+ M PD++T+++LID K + +++
Sbjct: 481 CKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDN 540
Query: 313 --FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+++LMH + +++ + L +A+ V+Q M + Y +I +
Sbjct: 541 IKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLI--H 598
Query: 371 GYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
G+C N+ +A +L + G ++ +++ G+ EAD + + N
Sbjct: 599 GHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLA 658
Query: 429 DSSTYKLL 436
D+ T K L
Sbjct: 659 DAETSKAL 666
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 102/251 (40%), Gaps = 28/251 (11%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
++G +D E+ R M K + + D YS LI + ++ + A LF +M G +
Sbjct: 412 KIGDTDSAF---ELNRKMLK-KGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQ 467
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARN 235
PD Y LI H K + KAL +M KG+ P++VTY++L+ +++
Sbjct: 468 PDEFTYTTLIDGHC----KEGNVQKALSLHDEMIKKGV---LPDVVTYSVLIDGLSKSAR 520
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMD---------------AYGKNGMIKEMESVLSR 280
+ L +L+ PD Y +M + G++ + + V
Sbjct: 521 TKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQS 580
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
M K D +++LI + + K K L+ P + S++ + +
Sbjct: 581 MLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGM 640
Query: 341 QGKAEYVFQKM 351
+A+ V Q++
Sbjct: 641 TVEADNVIQEL 651
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 156/329 (47%), Gaps = 17/329 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + K GQ R A+ L + +P+ +YN +I + K K + +A +
Sbjct: 146 YGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMC----KVKLVNEAFDLY 201
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M E P++VTY+ L+ + LF ++ + PD+YT+N ++D + K
Sbjct: 202 SEMVS-EGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCK 260
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+G +KE ++V + M KP+++T+ L+D Y + +K +F ++ P +
Sbjct: 261 DGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQS 320
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDE 385
+N MI + K + +A +F+KM P+ +TY +I G C + +S A ++ DE
Sbjct: 321 YNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLID--GLCKSGKISYALKLVDE 378
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEA--------DLLFENSHNMGVTPDSSTYKLLY 437
+ G + T +++L+A C N +A D +FE+ G D Y ++
Sbjct: 379 MHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMI 438
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPNKR 466
+ + + LL +ME NG +P+ +
Sbjct: 439 QGFCVKGLFNEALALLSKMEDNGRIPDAK 467
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 155/330 (46%), Gaps = 25/330 (7%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ +I M K A L+SEM + G PD Y+ALI+ L A+
Sbjct: 180 MYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFF----IVGKLKDAIDL 235
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F KM +E KP++ T+NIL+ + + + +F + + + P++ TY +MD Y
Sbjct: 236 FNKMI-LENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYC 294
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK-PTL 325
+ + S+ + M PD ++N++I+ + K + D+ +FK MH K P +
Sbjct: 295 LVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKK-MHCKNIIPNV 353
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECIITMYGYCDN--VSRA- 379
T+ S+I K+ GK Y + + M P ITY I+ C N V +A
Sbjct: 354 VTYTSLIDGLCKS---GKISYALKLVDEMHDRGVPPDIITYSSILD--ALCKNHQVDKAI 408
Query: 380 -------REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
++F++L G ++ V M++ +C+ GL EA L + G PD+ T
Sbjct: 409 ALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKT 468
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
Y+++ + K + ++ +KLL+ M G++
Sbjct: 469 YEIIILSLFKKDENDMAEKLLREMIARGLL 498
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 141/317 (44%), Gaps = 10/317 (3%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH---------LHTRDKAKALA 201
LI + GQ L+ +F+ + G P+ LI ++ K
Sbjct: 101 LINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQAR 160
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
AL +++ G + +PN+V YN ++ + + + V++ L+ E+ ++PD+ TY+ +
Sbjct: 161 AALQLLRRVDG-KLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSAL 219
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ + G +K+ + ++M KPD+ TFN+L+D + K + + VF +M
Sbjct: 220 ISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGI 279
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
KP + T+ S++ Y + KA +F M P +Y +I + V A
Sbjct: 280 KPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMN 339
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+F ++ V T ++++ C +G + A L + H+ GV PD TY + A
Sbjct: 340 LFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALC 399
Query: 442 KANMKELVQKLLKRMEQ 458
K + + LL +++
Sbjct: 400 KNHQVDKAIALLTKLKD 416
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/277 (19%), Positives = 114/277 (41%), Gaps = 21/277 (7%)
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F ++ + P I + +L + + +L +++ +A ++ T N +++ +
Sbjct: 47 FNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFS 106
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLID------SYG-----------KRQAFDKM 309
+ G SV + + P++IT LI SYG R A +
Sbjct: 107 QLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLL 166
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
+V L+ +P + +N++I + K +L +A ++ +M + +P +TY +I+
Sbjct: 167 RRVDGKLV----QPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISG 222
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
+ + A ++F+++ V T N +++ +C +G E +F G+ P+
Sbjct: 223 FFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPN 282
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
TY L Y + M Q G+ P+ +
Sbjct: 283 VVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQ 319
>gi|357138821|ref|XP_003570985.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Brachypodium distachyon]
Length = 613
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 140/291 (48%), Gaps = 13/291 (4%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
+ SEM+ G P +VYNA + L KA+ KA+ +Q+MK ERC+ N TY ++
Sbjct: 244 VISEMQEHGIPPSATVYNAYLDGLL----KARCTVKAVEVYQRMK-KERCRTNTETYTLM 298
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+ +++ +F E+ +I TY +++A+ + G+ ++ E V +M+
Sbjct: 299 INVYGKSKQPMSAMKIFNEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQQAGH 358
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
+PD+ +N L+++Y + ++F + H +P ++N ++ YG+A L +AE
Sbjct: 359 EPDVYAYNALMEAYSRAGFPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEA 418
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
F+ + P+ ++ +++ + NV R ++ +L K G LNAML AY
Sbjct: 419 TFESLKQQGMAPTMKSHMLLLSAHARSGNVGRCEQVMAQLHKSGLRPDTFALNAMLHAYA 478
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
G + + L + ++ + D ++ + AY +A L RME
Sbjct: 479 RAGRLDDMERLLA-AMDLAGSADVGSHNVAVNAYARAG-------YLGRME 521
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 142/298 (47%), Gaps = 10/298 (3%)
Query: 177 RPDPSVYNALITAHLHTR--DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
RPD YN LI A+ R +KA+++ A+ Q C P TY +LLRA AR
Sbjct: 184 RPDIICYNLLIDAYGRKRQLNKAESIYAAVLEAQ-------CVPTEDTYALLLRAYCNAR 236
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
++ + + E+ E + P YN +D K + V RMK +C+ + T+
Sbjct: 237 SLHRAEGVISEMQEHGIPPSATVYNAYLDGLLKARCTVKAVEVYQRMKKERCRTNTETYT 296
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
L+I+ YGK + ++F + K + T+ +++ + + L KAE VF++M
Sbjct: 297 LMINVYGKSKQPMSAMKIFNEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQQA 356
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ P Y ++ Y A EIF + +G + ++ N +++AY GL EA
Sbjct: 357 GHEPDVYAYNALMEAYSRAGFPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREA 416
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
+ FE+ G+ P ++ LL A+ ++ ++++ ++ ++G+ P+ F L A+
Sbjct: 417 EATFESLKQQGMAPTMKSHMLLLSAHARSGNVGRCEQVMAQLHKSGLRPDT-FALNAM 473
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 126/262 (48%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+P+I+ YN+L+ A + R +++ +++ + E+ P TY ++ AY + E
Sbjct: 184 RPDIICYNLLIDAYGRKRQLNKAESIYAAVLEAQCVPTEDTYALLLRAYCNARSLHRAEG 243
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
V+S M+ + P +N +D K + K +V++ + + + T+ MI YG
Sbjct: 244 VISEMQEHGIPPSATVYNAYLDGLLKARCTVKAVEVYQRMKKERCRTNTETYTLMINVYG 303
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
K++ A +F +M ++ + TY ++ + +A E+F+++ + G + V
Sbjct: 304 KSKQPMSAMKIFNEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQQAGHEPDVY 363
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
NA++EAY G P A +F +MG PD ++Y +L AY +A + + + +
Sbjct: 364 AYNALMEAYSRAGFPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEATFESL 423
Query: 457 EQNGIVPNKRFFLEALETFSSS 478
+Q G+ P + + L + S
Sbjct: 424 KQQGMAPTMKSHMLLLSAHARS 445
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 107/220 (48%)
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
++ S PDI YN ++DAYG+ + + ES+ + + QC P T+ LL+ +Y ++
Sbjct: 178 VYRSSFRPDIICYNLLIDAYGRKRQLNKAESIYAAVLEAQCVPTEDTYALLLRAYCNARS 237
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+ E V + P+ +N+ + KAR KA V+Q+M + + TY
Sbjct: 238 LHRAEGVISEMQEHGIPPSATVYNAYLDGLLKARCTVKAVEVYQRMKKERCRTNTETYTL 297
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+I +YG A +IF+E+ +G + T A++ A+ GL +A+ +FE G
Sbjct: 298 MINVYGKSKQPMSAMKIFNEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQQAG 357
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
PD Y L +AY++A + ++ M+ G P++
Sbjct: 358 HEPDVYAYNALMEAYSRAGFPQGASEIFSLMQHMGCEPDR 397
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 150/337 (44%), Gaps = 5/337 (1%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W + V W+ + + D Y+ LI G+K Q A +++ + + C P Y
Sbjct: 166 QWDPIISVCEWIVYRSSFRPDIICYNLLIDAYGRKRQLNKAESIYAAVLEAQCVPTEDTY 225
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
L+ A+ + A++L +A G +M+ P+ YN L +AR + ++
Sbjct: 226 ALLLRAYCN----ARSLHRAEGVISEMQ-EHGIPPSATVYNAYLDGLLKARCTVKAVEVY 280
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR 303
+ + + + TY +++ YGK+ + + M+S CK +I T+ L++++ +
Sbjct: 281 QRMKKERCRTNTETYTLMINVYGKSKQPMSAMKIFNEMQSIGCKANICTYTALVNAFARE 340
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
+K E+VF+ + + +P + +N+++ Y +A A +F M M P +Y
Sbjct: 341 GLCEKAEEVFEQMQQAGHEPDVYAYNALMEAYSRAGFPQGASEIFSLMQHMGCEPDRASY 400
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
++ YG A F+ L + G + + +L A+ +G + + H
Sbjct: 401 NILVDAYGRAGLHREAEATFESLKQQGMAPTMKSHMLLLSAHARSGNVGRCEQVMAQLHK 460
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
G+ PD+ + AY +A + +++LL M+ G
Sbjct: 461 SGLRPDTFALNAMLHAYARAGRLDDMERLLAAMDLAG 497
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 156/340 (45%), Gaps = 16/340 (4%)
Query: 126 LQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
++ +EV++ M+K+R +T Y+ +I V GK Q AM +F+EM++ GC+ + Y
Sbjct: 274 VKAVEVYQRMKKERCRT-NTETYTLMINVYGKSKQPMSAMKIFNEMQSIGCKANICTY-- 330
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
TA ++ + KA F++M+ +P++ YN L+ A ++A + +F
Sbjct: 331 --TALVNAFAREGLCEKAEEVFEQMQQAGH-EPDVYAYNALMEAYSRAGFPQGASEIFSL 387
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ PD +YN ++DAYG+ G+ +E E+ +K P + + LL+ ++ +
Sbjct: 388 MQHMGCEPDRASYNILVDAYGRAGLHREAEATFESLKQQGMAPTMKSHMLLLSAHARSGN 447
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS--FITY 363
+ EQV L S +P N+M+ Y +A G+ + + + + AM S ++
Sbjct: 448 VGRCEQVMAQLHKSGLRPDTFALNAMLHAYARA---GRLDDMERLLAAMDLAGSADVGSH 504
Query: 364 ECIITMYGYCDNVSRAREIFDEL-----SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+ Y + R F+ + K G D V + + + Y + +F
Sbjct: 505 NVAVNAYARAGYLGRMEAAFEGIRRRKGKKGGIDADVVSWTSRMGGYARKKEYGKCLEIF 564
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
E + G PD+ T K+L A + E V +++ M +
Sbjct: 565 EEMVDAGCYPDAGTAKVLMAACSDERQVEQVAAIVRSMHK 604
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 159/351 (45%), Gaps = 16/351 (4%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
+ M++Q+ D+ Y LI+ M K+G+ A +F EM G RP +YN LI
Sbjct: 278 ILTTMKRQKIE-PDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGF 336
Query: 191 LHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
+ + L A Y +M KG+ P + TYN L+ A + D+ + KE+ E
Sbjct: 337 CNKGN----LDMASAYKDEMLKKGIS---PTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
++PD TYN +++ Y + K+ + M ++ KP T+ L+ K+ +
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINY-GKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
+ +FK + P + FN++I + + ++G E + + M MK P +T+ I
Sbjct: 450 ADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFE-LLKDMDRMKVPPDEVTFNTI- 507
Query: 368 TMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
M G+C V ARE+FDE+ + G + N ++ Y G +A + + G
Sbjct: 508 -MQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG 566
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
P TY L + K +L ++LLK M G+ P+ + +E +
Sbjct: 567 FNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIA 617
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 156/363 (42%), Gaps = 44/363 (12%)
Query: 115 LFEELGKSDK-WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
LF +L +++ W+ E+FR K Y ++ +I V+ K+G+ + A M
Sbjct: 195 LFLKLNRTEAAWVLYAEMFRLRIKSSVYT-----FNIMINVLCKEGKLKKAKDFVGHMET 249
Query: 174 SGCRPDPSVYNALITAH------------LHTRDKAKALAKALGYFQKMKGMERCK---- 217
SG +P+ YN ++ + L T + K + Y + GM CK
Sbjct: 250 SGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGM--CKQGRL 307
Query: 218 ----------------PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
P+ V YN L+ N+D +A E+ + ++P + TYN +
Sbjct: 308 EEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSL 367
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ A E E ++ ++ PD IT+N+LI+ Y + K + ++ S
Sbjct: 368 IHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGI 427
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRA 379
KPT T+ S++ K +A+ +F+K+T+ P I + +I G+C NV A
Sbjct: 428 KPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALID--GHCSNSNVKGA 485
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
E+ ++ ++ T N +++ +C G EA LF+ G+ PD ++ L
Sbjct: 486 FELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISG 545
Query: 440 YTK 442
Y++
Sbjct: 546 YSR 548
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 156/353 (44%), Gaps = 13/353 (3%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
++ ++D+ +C + K++ + + L+++ K +T A L++EM +
Sbjct: 163 DMNRADEAFECF----YTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIK 218
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
+N +I K L KA + M+ KPNIVTYN ++ + V+
Sbjct: 219 SSVYTFNIMINVLC----KEGKLKKAKDFVGHME-TSGVKPNIVTYNTIVHGYCSSGRVE 273
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+A+ + + PD +TY ++ K G ++E + M +P + +N LI
Sbjct: 274 AADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKE-KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
D + + D M +K M K PT+ T+NS+I + +AE + +++
Sbjct: 334 DGFCNKGNLD-MASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGI 392
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
+P ITY +I Y C N +A + DE+ G T ++L EAD
Sbjct: 393 SPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADD 452
Query: 417 LFENSHNMGVTPDSSTYKLLYKAY-TKANMKELVQKLLKRMEQNGIVPNKRFF 468
LF+ + GV PD + L + + +N+K + LLK M++ + P++ F
Sbjct: 453 LFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFE-LLKDMDRMKVPPDEVTF 504
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 125/273 (45%), Gaps = 7/273 (2%)
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
Y K KG+ P I T N LL + + L+ E+ + +YT+N +++
Sbjct: 175 YTMKEKGV---LPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVL 231
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G +K+ + + M+++ KP+I+T+N ++ Y + + + ++ K +P
Sbjct: 232 CKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDS 291
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRAREIF 383
T+ S+I K +A +F++M PS + Y +I G+C+ N+ A
Sbjct: 292 FTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLID--GFCNKGNLDMASAYK 349
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
DE+ K G +ST N+++ A M EA+ + + G++PD+ TY +L Y +
Sbjct: 350 DEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRC 409
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+ L M +GI P K+ + L S
Sbjct: 410 ANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLS 442
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 76/185 (41%)
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
I F+ LI S D+ + F ++ PT+ T NS++ + K A ++ +
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M ++ S T+ +I + + +A++ + G + T N ++ YC +G
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
AD + + PDS TY L K E K+ + M Q G+ P+ +
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331
Query: 471 ALETF 475
++ F
Sbjct: 332 LIDGF 336
>gi|296081889|emb|CBI20894.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 143/325 (44%), Gaps = 4/325 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D+ ++ +I + G + AM F +M+ SG +P S +N LI + A ++
Sbjct: 141 DSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGY----GIAGEPEES 196
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ M E +PN+ TYN+L+RA +N+ + + ++ S L PD TYN +
Sbjct: 197 QKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIAT 256
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
AY +NG + E ++ M+++ +P+ T ++I Y K + Q + +P
Sbjct: 257 AYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQP 316
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
L FNS+I + A + V M P IT+ I+ + + + REIF
Sbjct: 317 NLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIF 376
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
D++ K + + + Y G P +A+ + G P+ + + + A
Sbjct: 377 DDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSA 436
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFF 468
E K+ ++M + GI PN + F
Sbjct: 437 GRMEYAIKIFEKMCECGIAPNLKTF 461
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 126/264 (47%), Gaps = 3/264 (1%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
KP++VTY LL A ++ D ++++ ++ E+ + PD +N V++A+ ++G ++E
Sbjct: 104 KPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMK 163
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE--KPTLPTFNSMIIN 334
+MK + KP TFN LI YG ++ +++ + LM E +P L T+N ++
Sbjct: 164 YFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLE-LMSQDENVRPNLRTYNVLVRA 222
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
+ + KA V KM A P +TY I T Y S+A I E+
Sbjct: 223 WCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPN 282
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
T ++ YC G EA ++G+ P+ + L K + A ++ V ++L
Sbjct: 283 ERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLT 342
Query: 455 RMEQNGIVPNKRFFLEALETFSSS 478
ME+ G+ P+ F + +S++
Sbjct: 343 LMEEFGVKPDVITFSTIMNAWSAA 366
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 135/290 (46%), Gaps = 11/290 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ + + G+ A + EM+NS +P+ +I + K + +A
Sbjct: 247 DAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYC----KEGKIKEA 302
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L + +MK + +PN+V +N L++ A + D VN + + E + PD+ T++ +M+
Sbjct: 303 LQFVYRMKDL-GLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMN 361
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
A+ G + + + M + +PD +++L Y + +K E++ +++ S P
Sbjct: 362 AWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHP 421
Query: 324 TLPTFNSMIINYGKARLQGKAEY---VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+ F ++I + A G+ EY +F+KM P+ T+E +I YG ++
Sbjct: 422 NVVIFTTIINGWCSA---GRMEYAIKIFEKMCECGIAPNLKTFETLIWGYGEARQPWKSE 478
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
E+ + + + +TL + EA+ GL EA+ + N +T ++
Sbjct: 479 EVLQIMEEFNVQPEKTTLLLVAEAWRATGLKKEANRILSAVKNEEMTHET 528
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 114/244 (46%), Gaps = 3/244 (1%)
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+V ++ + E P + TY ++ A + S++S+++ N +PD I FN +I
Sbjct: 90 EVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVI 149
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+++ + + + F + S KPT TFN++I YG A +++ + + M+ +
Sbjct: 150 NAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENV 209
Query: 358 -PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
P+ TY ++ + N+ +A + ++ G T N + AY NG ++A+
Sbjct: 210 RPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEG 269
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTK-ANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ N V P+ T ++ Y K +KE +Q + RM+ G+ PN F ++ F
Sbjct: 270 IILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQ-FVYRMKDLGLQPNLVVFNSLIKGF 328
Query: 476 SSSL 479
++
Sbjct: 329 IDAV 332
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 151/315 (47%), Gaps = 9/315 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + K G+TR A+ L + + D +Y+ +I + K K + A +
Sbjct: 178 YGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMC----KDKNVNDAFDLY 233
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M R NIVTY+ L+ + LF ++ + PD+YT+N ++DA+ K
Sbjct: 234 SEMVS-RRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCK 292
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G +KE ++ L+ M KPDI+T+N L+D Y + + + ++ H T+ +
Sbjct: 293 EGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRS 352
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDE 385
+N +I + K ++ +A +F++M + P+ ITY +I G C + +S A E+ D
Sbjct: 353 YNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLID--GLCKSGRISYALELIDL 410
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ G+ + T +++L+A C N L +A L + G+ P+ TY +L K
Sbjct: 411 MHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGR 470
Query: 446 KELVQKLLKRMEQNG 460
E + + + + G
Sbjct: 471 LEDARNIFEDLLVKG 485
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 158/358 (44%), Gaps = 48/358 (13%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +YS +I M K A L+SEM + + Y+ALI+ L A
Sbjct: 209 DVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFC----IVGKLKDA 264
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
+G F KM E P++ T+NIL+ A C + R + N L + + I PDI TYN +M
Sbjct: 265 IGLFNKMTS-ENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGI-KPDIVTYNSLM 322
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D Y + +S+L+ M + ++N++I+ + K + D+ ++FK + H +
Sbjct: 323 DGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIF 382
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECII------------ 367
P + T+NS+I K+ G+ Y + + M P ITY I+
Sbjct: 383 PNVITYNSLIDGLCKS---GRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKA 439
Query: 368 --------------TMY-------GYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEA 404
MY G C + AR IF++L G ++ V+T M++
Sbjct: 440 IALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQG 499
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+C +GL EA L + PD+ TY+++ + + + +KLL+ M G++
Sbjct: 500 FCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLL 557
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 145/324 (44%), Gaps = 5/324 (1%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
Y DT + I KGQ A+ ++ G D Y LI K
Sbjct: 136 YEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLC----KVGET 191
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
AL +++ G + + ++V Y+ ++ + + +NV+ L+ E+ ++ +I TY+
Sbjct: 192 RAALELLRRVDG-KLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSA 250
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ + G +K+ + ++M S PD+ TFN+L+D++ K + + +M
Sbjct: 251 LISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQG 310
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
KP + T+NS++ Y A+ + M+ T + +Y +I + V +A
Sbjct: 311 IKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAM 370
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
++F E+ V T N++++ C +G + A L + H+ G PD TY + A
Sbjct: 371 KLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDAL 430
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
K ++ + LL +++ GI PN
Sbjct: 431 CKNHLVDKAIALLIKLKDQGIRPN 454
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 149/326 (45%), Gaps = 34/326 (10%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
Q +++F+ M ++ + + Y+ LI + K G+ A+ L M + G +PD Y+++
Sbjct: 368 QAMKLFKEMHHKQIF-PNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSI 426
Query: 187 ITAHL--HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
+ A H DKA AL L K +G+ +PN+ TY IL+ + ++ +F+
Sbjct: 427 LDALCKNHLVDKAIALLIKL----KDQGI---RPNMYTYTILIDGLCKGGRLEDARNIFE 479
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
+L + TY ++ + +G+ E S+LS+MK N C PD IT+ ++I S +
Sbjct: 480 DLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKD 539
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV-FQKMTAMKYTPSFIT- 362
DK E++ + ++ + L +F + YG L A F +++ T S +
Sbjct: 540 ENDKAEKLLREMI---TRGLLYSF----LEYGSWSLSFMAAPAHFLNNDSLQCTSSQESG 592
Query: 363 -YECIITMYGYCDNVSRAREIFD--------------ELSKLGKDMKVSTLNAMLEAYCM 407
+ ++ YCD V + D + SK G + V+T M++ +C
Sbjct: 593 NWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDWSKQGYILDVNTYTVMIQGFCS 652
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTY 433
+GL E+ L G PD+ TY
Sbjct: 653 HGLFDESLALLSKMEVNGCIPDAVTY 678
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 118/275 (42%), Gaps = 9/275 (3%)
Query: 196 KAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
K+K L FQKM+ KPN V +NIL+ Q + ++ ++ + PD
Sbjct: 82 KSKHYHTVLSLFQKME-YRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDT 140
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK----RQAFDKMEQ 311
T N + + G I + + ++ + D +++ LI+ K R A + + +
Sbjct: 141 ITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRR 200
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
V L+ + + ++++I + K + A ++ +M + + + + +TY +I+ +
Sbjct: 201 VDGKLV----QLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFC 256
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ A +F++++ + V T N +++A+C G EA G+ PD
Sbjct: 257 IVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIV 316
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
TY L Y N + + +L M G+ R
Sbjct: 317 TYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVR 351
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 60/146 (41%)
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+F L+ P F ++ + K++ +FQKM P+F+ + +I +
Sbjct: 57 LFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFC 116
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ A + ++ K+G + TLN ++ +C+ G +A + +G D
Sbjct: 117 QLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQV 176
Query: 432 TYKLLYKAYTKANMKELVQKLLKRME 457
+Y L K +LL+R++
Sbjct: 177 SYGTLINGLCKVGETRAALELLRRVD 202
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 65/157 (41%), Gaps = 5/157 (3%)
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
I++++ + N ++ + ++ N PD+ F ++ S K + + + +F+
Sbjct: 36 IHSFSTSTTFHNNNDVVDAVSLFNCLLRQNPTPPDM-EFGQILGSLVKSKHYHTVLSLFQ 94
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC- 373
+ + KP FN +I + + L A V K+ M Y P IT I G+C
Sbjct: 95 KMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIK--GFCL 152
Query: 374 -DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
+ +A D+L LG + + ++ C G
Sbjct: 153 KGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVG 189
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 139/306 (45%), Gaps = 1/306 (0%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+R Y + Y+ LI + + + A LF M+ GC PD Y LI T +
Sbjct: 132 RRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNIN 191
Query: 198 KALAKALGYFQKMKGME-RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
AL + E CKPN++TYNI++ + D+ LF+E+ + P I
Sbjct: 192 IALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSII 251
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+YN ++ + G +E + +L M +PD++TFN+LID+ K + +++ +
Sbjct: 252 SYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVM 311
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+ S P L T+NS+I + A +F M + P I+Y +I Y V
Sbjct: 312 IESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKV 371
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
A ++++E+ +GK V T +++L+ + G +A LF G+ +S TY +
Sbjct: 372 EEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIF 431
Query: 437 YKAYTK 442
K
Sbjct: 432 LDGLCK 437
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 153/321 (47%), Gaps = 13/321 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ ++ + K G+ A LF EM+ G P YN+LI H A ++
Sbjct: 218 YNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLI----HGFCCAGKWEESKRLL 273
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M +G++ P++VT+N+L+ + V + L + ES + PD+ TYN +++ +
Sbjct: 274 DEMLDQGLQ---PDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGF 330
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
G + + M S C+PD+I++N+LI+ Y K ++ +++ ++ ++P +
Sbjct: 331 CMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNV 390
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIF 383
T++S++ A A+ +F M A + TY I + G C N + A ++F
Sbjct: 391 ITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYG--IFLDGLCKNDCLFEAMKLF 448
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
EL +++ LN +++ C G A LFE N G P+ TY ++ + +
Sbjct: 449 TELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCRE 508
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+ L+++ME NG P+
Sbjct: 509 GQVDKANVLIQKMEANGCTPD 529
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 114/250 (45%), Gaps = 6/250 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K K ++ ++ M + + D Y+ LI G A LF M +
Sbjct: 290 VLIDTLCKEGKVIEAKKLLGVMI-ESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPS 348
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
GC PD YN LI + K + +A+ + +M + + +PN++TY+ LL+ A
Sbjct: 349 KGCEPDVISYNVLINGY----SKTLKVEEAMKLYNEMLLVGK-RPNVITYDSLLKGIFLA 403
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
VD LF + +A + YTY +D KN + E + + +KS+ K +I
Sbjct: 404 GKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENL 463
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N LID K + ++F+ L + +P + T+ MI + + KA + QKM A
Sbjct: 464 NCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEA 523
Query: 354 MKYTPSFITY 363
TP ITY
Sbjct: 524 NGCTPDIITY 533
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 153/367 (41%), Gaps = 15/367 (4%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L K + Q ++ M + +D + L+ + + R F+ +
Sbjct: 75 LLSGLAKIKHYSQVFSLYNQM-RLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRR 133
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P+ YN LI +++A F +M+ + C P++VTY L++
Sbjct: 134 GYSPNIVTYNTLIKGLCMEH----RISEATRLFLRMQKL-GCTPDVVTYGTLIKGLCGTG 188
Query: 235 NVDQVNALFKELHESI------LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
N++ L +E+ I P++ TYN ++D K G E + + MK+ P
Sbjct: 189 NINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIP 248
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
II++N LI + +++ +++ ++ +P + TFN +I K +A+ +
Sbjct: 249 SIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLL 308
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
M P +TY +I + +++ ARE+F + G + V + N ++ Y
Sbjct: 309 GVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKT 368
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK--- 465
EA L+ +G P+ TY L K A + +KL M+ +GI N
Sbjct: 369 LKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTY 428
Query: 466 RFFLEAL 472
FL+ L
Sbjct: 429 GIFLDGL 435
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 129/313 (41%), Gaps = 23/313 (7%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK--GM--ERCKPN 219
A+ F M S P S +N L++ K K ++ + +M+ G+ +RC
Sbjct: 53 ALHFFHLMMRSTPTPSLSSFNHLLSG----LAKIKHYSQVFSLYNQMRLSGLSSDRC--- 105
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
T NILL + + A F + +P+I TYN ++ I E +
Sbjct: 106 --TLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFL 163
Query: 280 RMKSNQCKPDIITFNLLIDSY---GKRQAFDKMEQVFKSLMHSKE---KPTLPTFNSMII 333
RM+ C PD++T+ LI G K+ Q + + E KP + T+N ++
Sbjct: 164 RMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVD 223
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGK 391
K + +A+ +F++M PS I+Y +I +G+C ++ + DE+ G
Sbjct: 224 GLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLI--HGFCCAGKWEESKRLLDEMLDQGL 281
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
+ T N +++ C G EA L G+ PD TY L + + ++
Sbjct: 282 QPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARE 341
Query: 452 LLKRMEQNGIVPN 464
L M G P+
Sbjct: 342 LFVSMPSKGCEPD 354
>gi|298711148|emb|CBJ32373.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 962
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 155/357 (43%), Gaps = 11/357 (3%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
G W + ++ MQK+ + YS ++ + GQ + A+ EMR G D
Sbjct: 423 GDKGDWERAEQMLVGMQKEHGVEPNRFCYSAVVKALANGGQWKRALETLDEMRECGLSAD 482
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVT----YNILLRACAQARN 235
P VY A I A +K KAL K+ KP + + YN + A +A+
Sbjct: 483 PVVYTAAIGAC----EKFGQWEKALDTLSKLVSE---KPPMRSLMWGYNAAISALGKAKQ 535
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
++ + L + S L PD YTY +M A G +G +E S+L M+ +P+ + +N
Sbjct: 536 MEGIKDLVATMKASGLKPDEYTYAAMMRASGIDGSWEESWSMLVEMEQAGVRPNRVVYNT 595
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
LI S K + +K + + + P + T+ +++ + +AE + +M +
Sbjct: 596 LIASVLKGEQMEKADDILNRMREGGVPPDVTTYTTIMSGCKRESDWRRAEALLSEMESFG 655
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
P+ T ++ +YG V RA +F++ G M V N ++ P
Sbjct: 656 VKPNSRTLTAVLKVYGDAGEVERALALFEQYDASGMVMDVICFNTLMGPVLKKDDPETVL 715
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
LF + GV PDS T L+ +A +A E L+++M + G V + + + +
Sbjct: 716 ELFSRMESRGVEPDSLTMSLVLRAAEQAGAAEWAWLLMEKMREEGGVIAMQVYADGI 772
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 126/322 (39%), Gaps = 12/322 (3%)
Query: 163 LAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVT 222
A+ L EM+ G PD Y +L++A L R A A L F+ + KPN +T
Sbjct: 358 FALGLMEEMKREGVEPDIITYGSLMSA-LSPRGLAGA-DIVLELFETL-AKSGLKPNSIT 414
Query: 223 YNILLRACAQARNVDQVNALFKELH-ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
Y +RA + ++ + + E + P+ + Y+ V+ A G K L M
Sbjct: 415 YVSAIRAYGDKGDWERAEQMLVGMQKEHGVEPNRFCYSAVVKALANGGQWKRALETLDEM 474
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH-SKEKPTLPT----FNSMIINYG 336
+ D + + I G + F + E+ +L EKP + + +N+ I G
Sbjct: 475 RECGLSADPVVYTAAI---GACEKFGQWEKALDTLSKLVSEKPPMRSLMWGYNAAISALG 531
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
KA+ + + M A P TY ++ G + + + E+ + G
Sbjct: 532 KAKQMEGIKDLVATMKASGLKPDEYTYAAMMRASGIDGSWEESWSMLVEMEQAGVRPNRV 591
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
N ++ + +AD + GV PD +TY + + + + LL M
Sbjct: 592 VYNTLIASVLKGEQMEKADDILNRMREGGVPPDVTTYTTIMSGCKRESDWRRAEALLSEM 651
Query: 457 EQNGIVPNKRFFLEALETFSSS 478
E G+ PN R L+ + +
Sbjct: 652 ESFGVKPNSRTLTAVLKVYGDA 673
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 122/306 (39%), Gaps = 47/306 (15%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
L +MR G +PD Y ++ + A A +++G++ Y+ +
Sbjct: 183 LLDQMRCDGIKPDSYTYVGVVKGIQGPKKNAMMRAVLEDAKLELEGLDLS----AVYSAV 238
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+ A + + +AL E+ + + D YTY M+A + G + + L RM+ +
Sbjct: 239 VSGYAVDGSWEDASALVDEMFANDVPRDEYTYCAAMNACKEAGKWMQAAAFLPRMREDGV 298
Query: 287 KPDIITFNLLIDS---YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
P+ I +N +I + +G+ K+ +++E + S N G+ +
Sbjct: 299 PPNTIAYNTVIGACAFFGRPN---------KAWNNNRETSSFLRPTSTRENKGRGLSPAQ 349
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
AE D A + +E+ + G + + T +++
Sbjct: 350 AE--------------------------ASDAGDFALGLMEEMKREGVEPDIITYGSLMS 383
Query: 404 AYCMNGLPTEADL---LFENSHNMGVTPDSSTYKLLYKAY-TKANMKELVQKLLKRMEQN 459
A GL AD+ LFE G+ P+S TY +AY K + + Q L+ +++
Sbjct: 384 ALSPRGLAG-ADIVLELFETLAKSGLKPNSITYVSAIRAYGDKGDWERAEQMLVGMQKEH 442
Query: 460 GIVPNK 465
G+ PN+
Sbjct: 443 GVEPNR 448
>gi|225430029|ref|XP_002281569.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Vitis vinifera]
Length = 635
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 143/325 (44%), Gaps = 4/325 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D+ ++ +I + G + AM F +M+ SG +P S +N LI + A ++
Sbjct: 141 DSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGY----GIAGEPEES 196
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ M E +PN+ TYN+L+RA +N+ + + ++ S L PD TYN +
Sbjct: 197 QKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIAT 256
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
AY +NG + E ++ M+++ +P+ T ++I Y K + Q + +P
Sbjct: 257 AYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQP 316
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
L FNS+I + A + V M P IT+ I+ + + + REIF
Sbjct: 317 NLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIF 376
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
D++ K + + + Y G P +A+ + G P+ + + + A
Sbjct: 377 DDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSA 436
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFF 468
E K+ ++M + GI PN + F
Sbjct: 437 GRMEYAIKIFEKMCECGIAPNLKTF 461
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 126/264 (47%), Gaps = 3/264 (1%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
KP++VTY LL A ++ D ++++ ++ E+ + PD +N V++A+ ++G ++E
Sbjct: 104 KPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMK 163
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE--KPTLPTFNSMIIN 334
+MK + KP TFN LI YG ++ +++ + LM E +P L T+N ++
Sbjct: 164 YFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLE-LMSQDENVRPNLRTYNVLVRA 222
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
+ + KA V KM A P +TY I T Y S+A I E+
Sbjct: 223 WCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPN 282
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
T ++ YC G EA ++G+ P+ + L K + A ++ V ++L
Sbjct: 283 ERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLT 342
Query: 455 RMEQNGIVPNKRFFLEALETFSSS 478
ME+ G+ P+ F + +S++
Sbjct: 343 LMEEFGVKPDVITFSTIMNAWSAA 366
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 135/290 (46%), Gaps = 11/290 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ + + G+ A + EM+NS +P+ +I + K + +A
Sbjct: 247 DAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYC----KEGKIKEA 302
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L + +MK + +PN+V +N L++ A + D VN + + E + PD+ T++ +M+
Sbjct: 303 LQFVYRMKDL-GLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMN 361
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
A+ G + + + M + +PD +++L Y + +K E++ +++ S P
Sbjct: 362 AWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHP 421
Query: 324 TLPTFNSMIINYGKARLQGKAEY---VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+ F ++I + A G+ EY +F+KM P+ T+E +I YG ++
Sbjct: 422 NVVIFTTIINGWCSA---GRMEYAIKIFEKMCECGIAPNLKTFETLIWGYGEARQPWKSE 478
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
E+ + + + +TL + EA+ GL EA+ + N +T ++
Sbjct: 479 EVLQIMEEFNVQPEKTTLLLVAEAWRATGLKKEANRILSAVKNEEMTHET 528
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 112/240 (46%), Gaps = 3/240 (1%)
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+V ++ + E P + TY ++ A + S++S+++ N +PD I FN +I
Sbjct: 90 EVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVI 149
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+++ + + + F + S KPT TFN++I YG A +++ + + M+ +
Sbjct: 150 NAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENV 209
Query: 358 -PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
P+ TY ++ + N+ +A + ++ G T N + AY NG ++A+
Sbjct: 210 RPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEG 269
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTK-ANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ N V P+ T ++ Y K +KE +Q + RM+ G+ PN F ++ F
Sbjct: 270 IILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQ-FVYRMKDLGLQPNLVVFNSLIKGF 328
>gi|302819015|ref|XP_002991179.1| hypothetical protein SELMODRAFT_448320 [Selaginella moellendorffii]
gi|300141007|gb|EFJ07723.1| hypothetical protein SELMODRAFT_448320 [Selaginella moellendorffii]
Length = 561
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 194/471 (41%), Gaps = 20/471 (4%)
Query: 17 SSSSASSSSSSSSSSFNQSSSQNYNFTHRHIPLSLRTRPRTGICCVWTRPRSKRGRKSEE 76
SSS S + SSS + + R +R + + R R+ R
Sbjct: 23 GSSSLSDCAEPCSSSVASPCWISSRYDPRRAARGVRIQVAAAVARNSPRIRNLRNNPGPA 82
Query: 77 LESKELV--RVLMRSFSDKEPLVRTLNKYVKV--VRSEHCFLLFEELGKSDKWLQCLEVF 132
L ++L R+++ EPL L KY + E + W ++
Sbjct: 83 LSPEQLAWERMMLEVEKSPEPLA-ILKKYAGDGNISRESVVGTLTRFKQMQAWKIIIKFT 141
Query: 133 RWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH 192
W+ +Q WY + Y ++ K GQ +F M G + +Y I +
Sbjct: 142 EWLMEQGWYNFNQKDYFLVLLAYCKDGQVDKTEGIFQRMAELGVAANIEMYTLQIEGYGR 201
Query: 193 TR--DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES- 249
R DKA+A+ FQ++ P TY ++++ ++A +D V +FK + +S
Sbjct: 202 RRSFDKAEAV------FQRLLTTGP-SPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSP 254
Query: 250 --ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
+ PD YN ++ YGK G +++ SV MK + I+TFN L+ ++ +
Sbjct: 255 SPTVKPDARMYNLMIHTYGKQGKVEQAMSVYQSMKRERVALTIVTFNSLLAC---QKTWK 311
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
E VF+ L +K P + ++ +++ Y KAR A F M A P+ + Y +I
Sbjct: 312 DAEDVFRKLQAAKLDPDVFSYTALVNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNALI 371
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
Y C + AR + ++ + G V + +++ AY L +A+ +
Sbjct: 372 NAYAKCKDPEGARAVLKQMKQNGCTPTVESYTSLISAYVSVNLMAKAEQTVLRMKEADLQ 431
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
P+ T+ +L Y N + + + + M+ G+ PN+ + + + S+
Sbjct: 432 PNLQTFCILMTGYANGNKLDNMMRSFETMKLAGLEPNRHVYTVLVNAYGSN 482
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 145/322 (45%), Gaps = 24/322 (7%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
L ++ + +PD +YN +I HT K + +A+ +Q MK ER IVT+N L
Sbjct: 249 LVTDSPSPTVKPDARMYNLMI----HTYGKQGKVEQAMSVYQSMK-RERVALTIVTFNSL 303
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
L ++ + V F++L + L PD+++Y +++AY K + + M +
Sbjct: 304 LACQKTWKDAEDV---FRKLQAAKLDPDVFSYTALVNAYAKARRAECAHAAFDDMIAAGI 360
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
+P + +N LI++Y K + + V K + + PT+ ++ S+I Y L KAE
Sbjct: 361 RPTQVAYNALINAYAKCKDPEGARAVLKQMKQNGCTPTVESYTSLISAYVSVNLMAKAEQ 420
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYC-----DNVSRAREIFDELSKLGKDMKVSTLNAM 401
+M P+ T+ CI+ M GY DN+ R+ E +L+ L + V T+ +
Sbjct: 421 TVLRMKEADLQPNLQTF-CIL-MTGYANGNKLDNMMRSFETM-KLAGLEPNRHVYTV--L 475
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ AY N A + ++ G PD +L K E + +LL G+
Sbjct: 476 VNAYGSNDDFDSAIIWYKQMLGTGCKPDPILRTVLLKIAKSHEQTEEIHELL------GM 529
Query: 462 VPNKRFFLEALETFSSSLAGSQ 483
+ R E L+T +L Q
Sbjct: 530 QKSARSLEEGLDTGVDTLVLPQ 551
>gi|410110095|gb|AFV61127.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
montevidensis]
Length = 418
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 138/287 (48%), Gaps = 7/287 (2%)
Query: 134 WMQK--QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
W+QK Q D +YS LI + K A+ +FS ++ SG PD YNA+I
Sbjct: 21 WLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVF- 79
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KAK +A +MK PN +Y+ LL + + + ++F E+ E
Sbjct: 80 ---GKAKLFREARSLIGEMKA-AGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKC 135
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
D+ T N ++D YG+ GM KE + + M+ +P+++++N L+ YG + F +
Sbjct: 136 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 195
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+F+ + + + T+NSM++ YGK KA + Q+M + P+ ITY II+++G
Sbjct: 196 LFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWG 255
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+ RA +F +L G ++ M+ AY GL A L
Sbjct: 256 KVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGLVAHAKRLL 302
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 149/316 (47%), Gaps = 5/316 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS LI GK+G A+ +M D +Y+ LI D +KA++ F
Sbjct: 2 YSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS----IF 57
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++K P++V YN ++ +A+ + +L E+ + + P+ +Y+ ++ Y +
Sbjct: 58 SRLK-RSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTTSYSTLLTMYVE 116
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
N E SV S M+ +C D+ T N++ID YG+ + +++F + +P + +
Sbjct: 117 NKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 176
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N+++ YG A L G+A ++F+ M + +TY ++ +YG +A + E+
Sbjct: 177 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQ 236
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G + T + ++ + G A +LF+ + G D ++ + AY +A +
Sbjct: 237 SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGLVA 296
Query: 448 LVQKLLKRMEQNGIVP 463
++LL +++ +P
Sbjct: 297 HAKRLLHELKRPDNIP 312
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 147/360 (40%), Gaps = 42/360 (11%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L EM+ +G P+ + Y+ L+T ++
Sbjct: 61 KRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTTSYSTLLTMYVEN--- 117
Query: 197 AKALAKALGYFQKMK--------------------------------GMER--CKPNIVT 222
K +AL F +M+ GM + +PN+V+
Sbjct: 118 -KKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 176
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
YN LLR A + LF+ + + ++ TYN +M YGK ++ +++ M+
Sbjct: 177 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQ 236
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
S +P+ IT++ +I +GK D+ +F+ L S + F +MI+ Y +A L
Sbjct: 237 SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGLVA 296
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
A+ + ++ P I + I + + A +F + G+ ++ M+
Sbjct: 297 HAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMI 352
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+ +F+ +G PDS ++ AY K + + M++ G V
Sbjct: 353 HLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVGCV 412
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%)
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TY+ ++ +GK G+ S L +M+ ++ D++ ++ LI+ K + K +F L
Sbjct: 1 TYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 60
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
S P L +N+MI +GKA+L +A + +M A P+ +Y ++TMY
Sbjct: 61 KRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTTSYSTLLTMYVENKKF 120
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
A +F E+ ++ + ++T N M++ Y G+ EAD LF MG+ P+ +Y L
Sbjct: 121 LEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTL 180
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ Y A + L + M++ I N
Sbjct: 181 LRVYGDAELFGEAIHLFRLMQRKNIEQN 208
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 108/243 (44%)
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
TY+ L+ + D + +++ + + D+ Y+ +++ K + S+ SR+
Sbjct: 1 TYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 60
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
K + PD++ +N +I+ +GK + F + + + + P ++++++ Y + +
Sbjct: 61 KRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTTSYSTLLTMYVENKKF 120
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
+A VF +M +K T +I +YG A ++F + K+G + V + N +
Sbjct: 121 LEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTL 180
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
L Y L EA LF + + TY + Y K E L++ M+ GI
Sbjct: 181 LRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGI 240
Query: 462 VPN 464
PN
Sbjct: 241 EPN 243
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 151/320 (47%), Gaps = 8/320 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + + LA+ F ++ +G R + + N L+ + +AL L
Sbjct: 114 YAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRT 173
Query: 208 QKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHE--SILAPDIYTYNGVMDA 264
++ C P++ +Y+ILL++ C Q ++ Q + L + + E ++ +P++ YN V+D
Sbjct: 174 PELG----CVPDVFSYSILLKSLCDQGKS-GQADDLLRMMAEGGAVCSPNVVAYNTVIDG 228
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ K G + + + M PD++T+N ++ + K +A DK E + +++ + P
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 288
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
T+N++I Y +A VF++M P +T ++ + AR++FD
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 348
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
++ G++ V + N ML Y G + LF+ G+ PD T+ +L KAY
Sbjct: 349 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 408
Query: 445 MKELVQKLLKRMEQNGIVPN 464
M + + M +G+ P+
Sbjct: 409 MLDKAMIIFNEMRDHGVKPD 428
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 161/389 (41%), Gaps = 45/389 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI-YSKLIAVMGKKGQTRLAMWLFSEMR 172
+L + L K Q ++ R M + + + Y+ +I K+G A LF EM
Sbjct: 187 ILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMV 246
Query: 173 NSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
G PD YN+++ H KA+A+ KA + ++M +R PN TYN L+ +
Sbjct: 247 QRGIPPDLVTYNSVV----HALCKARAMDKAEAFLRQMVN-KRVLPNNWTYNNLIYGYSS 301
Query: 233 ARNVDQVNALFKELH-ESILA----------------------------------PDIYT 257
+ +FKE+ SIL PD+++
Sbjct: 302 TGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 361
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN +++ Y G + +M + M + PD TFN+LI +Y DK +F +
Sbjct: 362 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMR 421
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
KP + T+ ++I + A F +M P Y C+I G+C + S
Sbjct: 422 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQ--GFCTHGS 479
Query: 378 --RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+A+E+ E+ G + + ++++ C G +A +F+ + N+G+ PD+ Y +
Sbjct: 480 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSM 539
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L Y E ++ M GI PN
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPN 568
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 136/295 (46%), Gaps = 11/295 (3%)
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM-KGMERCKPNIVTYNILLRACAQA 233
GC PD Y+ L+ + D+ K+ +A + M +G C PN+V YN ++ +
Sbjct: 177 GCVPDVFSYSILLKSLC---DQGKS-GQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKE 232
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+V++ LFKE+ + + PD+ TYN V+ A K + + E+ L +M + + P+ T+
Sbjct: 233 GDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTY 292
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM---IINYGKARLQGKAEYVFQK 350
N LI Y + + +VFK + P + T + + + YGK + +A VF
Sbjct: 293 NNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIK---EARDVFDT 349
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M P +Y ++ Y + ++FD + G T N +++AY G+
Sbjct: 350 MAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGM 409
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+A ++F + GV PD TY+ + A + + + +M G+ P+K
Sbjct: 410 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 464
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 141/340 (41%), Gaps = 6/340 (1%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
+ +W + + VF+ M++ + D S L+ + K G+ + A +F M G PD
Sbjct: 302 TGQWKEAVRVFKEMRRHSI-LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 360
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
YN ++ + L F M G + P+ T+N+L++A A +D+
Sbjct: 361 SYNIMLNGYA----TKGCLVDMTDLFDLMLG-DGIAPDFYTFNVLIKAYANCGMLDKAMI 415
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
+F E+ + + PD+ TY V+ A + G + + ++M PD +N LI +
Sbjct: 416 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFC 475
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
+ K +++ +M++ + F+S+I N K A+ +F + P +
Sbjct: 476 THGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 535
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
Y ++ Y + +A +FD + G + V ++ YC G E LF
Sbjct: 536 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREM 595
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
G+ P + Y ++ +A + M ++GI
Sbjct: 596 LQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGI 635
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 140/335 (41%), Gaps = 5/335 (1%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E F + + + Y+ LI GQ + A+ +F EMR PD + L+ +
Sbjct: 274 EAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGS 333
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
K + +A F M M+ P++ +YNI+L A + + LF +
Sbjct: 334 LC----KYGKIKEARDVFDTM-AMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD 388
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+APD YT+N ++ AY GM+ + + + M+ + KPD++T+ +I + + D
Sbjct: 389 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 448
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
+ F ++ P +N +I + KA+ + ++ + + II
Sbjct: 449 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 508
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
V A+ IFD +G + +++ YC+ G +A +F+ + G+ P+
Sbjct: 509 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 568
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y L Y K + L + M Q GI P+
Sbjct: 569 VVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPS 603
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 137/333 (41%), Gaps = 40/333 (12%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
LF M G PD +N LI A+ + L KA+ F +M+ KP++VTY +
Sbjct: 381 LFDLMLGDGIAPDFYTFNVLIKAYAN----CGMLDKAMIIFNEMRD-HGVKPDVVTYRTV 435
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ- 285
+ A + +D F ++ + +APD Y YN ++ + +G + + + ++S + +N
Sbjct: 436 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGM 495
Query: 286 --------------CK--------------------PDIITFNLLIDSYGKRQAFDKMEQ 311
CK PD + +++L+D Y +K +
Sbjct: 496 HLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALR 555
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
VF +++ + +P + + +++ Y K + +F++M PS I Y II
Sbjct: 556 VFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLF 615
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
A+ F E+++ G M + T N +L N EA LF+ M V +
Sbjct: 616 QAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINII 675
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
T + + E + L + ++ +VP+
Sbjct: 676 TLNTMIDGMFQTRRVEEAKDLFASISRSRLVPS 708
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 9/218 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +YS L+ G+ A+ +F M ++G P+ VY L+ + K + +
Sbjct: 533 DAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYC----KIGRIDEG 588
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
L F++M +G+ KP+ + Y+I++ QA F E+ ES +A DI TYN V
Sbjct: 589 LSLFREMLQRGI---KPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIV 645
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ KN E + +++ K +IIT N +ID + + ++ + +F S+ S+
Sbjct: 646 LRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRL 705
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
P++ T++ MI N K L +AE +F M P+
Sbjct: 706 VPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPN 743
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 9/261 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +S +I + K G+ A +F N G PD VY+ L+ + + KA
Sbjct: 498 DIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLV----GKMEKA 553
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
L F M G+E PN+V Y L+ + +D+ +LF+E+ + + P Y+ +
Sbjct: 554 LRVFDAMVSAGIE---PNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSII 610
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+D + G + M + DI T+N+++ K + FD+ +FK L
Sbjct: 611 IDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNV 670
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
K + T N+MI + R +A+ +F ++ + PS +TY +IT V A +
Sbjct: 671 KINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAED 730
Query: 382 IFDELSKLGKDMKVSTLNAML 402
+F + G + LN ++
Sbjct: 731 MFSSMQNAGCEPNSRLLNHVV 751
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 146/367 (39%), Gaps = 48/367 (13%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y +IA + + G+ AM F++M + G PD YN LI KA K
Sbjct: 428 DVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKA--KE 485
Query: 204 LGYFQKMKGMERCKPNIVTYN-ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
L GM +IV ++ I+ C R +D N +F L PD Y+ +M
Sbjct: 486 LISEIMNNGMHL---DIVFFSSIINNLCKLGRVMDAQN-IFDLTVNVGLHPDAVVYSMLM 541
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D Y G +++ V M S +P+++ + L++ Y K D+ +F+ ++ K
Sbjct: 542 DGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIK 601
Query: 323 P-----------------TLP------------------TFNSMIINYGKARLQGKAEYV 347
P T+P T+N ++ K R +A ++
Sbjct: 602 PSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFL 661
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F+++ AM + IT +I V A+++F +S+ V T + M+
Sbjct: 662 FKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIK 721
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
GL EA+ +F + N G P+S + + K N L ++++ + F
Sbjct: 722 EGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDE------RNF 775
Query: 468 FLEALET 474
LE L T
Sbjct: 776 SLEHLTT 782
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 87/216 (40%), Gaps = 34/216 (15%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
++G+ D+ L +FR M QR T +YS +I + + G+T A F EM SG
Sbjct: 581 KIGRIDEGLS---LFREML-QRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIA 636
Query: 178 PDPSVYNALITAHLHTR--DKAKALAKAL-----------------GYFQKMKGME---- 214
D YN ++ R D+A L K L G FQ + E
Sbjct: 637 MDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 696
Query: 215 -------RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
R P++VTY+I++ + V++ +F + + P+ N V+ K
Sbjct: 697 FASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLK 756
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR 303
I + LS++ + +T LL+D + +
Sbjct: 757 KNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSK 792
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA-DLLFENSHNMGVTPDSSTYKLLY 437
A F +L + G + + N +LE +C EA D+L + +G PD +Y +L
Sbjct: 130 ALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILL 189
Query: 438 KAYTKANMKELVQKLLKRMEQNGIV--PNKRFFLEALETF 475
K+ LL+ M + G V PN + ++ F
Sbjct: 190 KSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGF 229
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 151/320 (47%), Gaps = 8/320 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + + LA+ F ++ +G R + + N L+ + +AL L
Sbjct: 127 YAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRT 186
Query: 208 QKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHE--SILAPDIYTYNGVMDA 264
++ C P++ +Y+ILL++ C Q ++ Q + L + + E ++ +P++ YN V+D
Sbjct: 187 PELG----CVPDVFSYSILLKSLCDQGKS-GQADDLLRMMAEGGAVCSPNVVAYNTVIDG 241
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ K G + + + M PD++T+N ++ + K +A DK E + +++ + P
Sbjct: 242 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 301
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
T+N++I Y +A VF++M P +T ++ + AR++FD
Sbjct: 302 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 361
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
++ G++ V + N ML Y G + LF+ G+ PD T+ +L KAY
Sbjct: 362 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 421
Query: 445 MKELVQKLLKRMEQNGIVPN 464
M + + M +G+ P+
Sbjct: 422 MLDKAMIIFNEMRDHGVKPD 441
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 161/389 (41%), Gaps = 45/389 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI-YSKLIAVMGKKGQTRLAMWLFSEMR 172
+L + L K Q ++ R M + + + Y+ +I K+G A LF EM
Sbjct: 200 ILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMV 259
Query: 173 NSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
G PD YN+++ H KA+A+ KA + ++M +R PN TYN L+ +
Sbjct: 260 QRGIPPDLVTYNSVV----HALCKARAMDKAEAFLRQMVN-KRVLPNNWTYNNLIYGYSS 314
Query: 233 ARNVDQVNALFKELH-ESILA----------------------------------PDIYT 257
+ +FKE+ SIL PD+++
Sbjct: 315 TGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 374
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN +++ Y G + +M + M + PD TFN+LI +Y DK +F +
Sbjct: 375 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMR 434
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
KP + T+ ++I + A F +M P Y C+I G+C + S
Sbjct: 435 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQ--GFCTHGS 492
Query: 378 --RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+A+E+ E+ G + + ++++ C G +A +F+ + N+G+ PD+ Y +
Sbjct: 493 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSM 552
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L Y E ++ M GI PN
Sbjct: 553 LMDGYCLVGKMEKALRVFDAMVSAGIEPN 581
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 136/295 (46%), Gaps = 11/295 (3%)
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM-KGMERCKPNIVTYNILLRACAQA 233
GC PD Y+ L+ + D+ K+ +A + M +G C PN+V YN ++ +
Sbjct: 190 GCVPDVFSYSILLKSLC---DQGKS-GQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKE 245
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+V++ LFKE+ + + PD+ TYN V+ A K + + E+ L +M + + P+ T+
Sbjct: 246 GDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTY 305
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM---IINYGKARLQGKAEYVFQK 350
N LI Y + + +VFK + P + T + + + YGK + +A VF
Sbjct: 306 NNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIK---EARDVFDT 362
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M P +Y ++ Y + ++FD + G T N +++AY G+
Sbjct: 363 MAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGM 422
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+A ++F + GV PD TY+ + A + + + +M G+ P+K
Sbjct: 423 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 477
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 141/340 (41%), Gaps = 6/340 (1%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
+ +W + + VF+ M++ + D S L+ + K G+ + A +F M G PD
Sbjct: 315 TGQWKEAVRVFKEMRRHSI-LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 373
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
YN ++ + L F M G + P+ T+N+L++A A +D+
Sbjct: 374 SYNIMLNGYA----TKGCLVDMTDLFDLMLG-DGIAPDFYTFNVLIKAYANCGMLDKAMI 428
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
+F E+ + + PD+ TY V+ A + G + + ++M PD +N LI +
Sbjct: 429 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFC 488
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
+ K +++ +M++ + F+S+I N K A+ +F + P +
Sbjct: 489 THGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 548
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
Y ++ Y + +A +FD + G + V ++ YC G E LF
Sbjct: 549 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREM 608
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
G+ P + Y ++ +A + M ++GI
Sbjct: 609 LQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGI 648
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 140/335 (41%), Gaps = 5/335 (1%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E F + + + Y+ LI GQ + A+ +F EMR PD + L+ +
Sbjct: 287 EAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGS 346
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
K + +A F M M+ P++ +YNI+L A + + LF +
Sbjct: 347 LC----KYGKIKEARDVFDTM-AMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD 401
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+APD YT+N ++ AY GM+ + + + M+ + KPD++T+ +I + + D
Sbjct: 402 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 461
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
+ F ++ P +N +I + KA+ + ++ + + II
Sbjct: 462 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 521
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
V A+ IFD +G + +++ YC+ G +A +F+ + G+ P+
Sbjct: 522 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 581
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y L Y K + L + M Q GI P+
Sbjct: 582 VVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPS 616
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 135/328 (41%), Gaps = 11/328 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y +IA + + G+ AM F++M + G PD YN LI KA K
Sbjct: 441 DVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKA--KE 498
Query: 204 LGYFQKMKGMERCKPNIVTYN-ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
L GM +IV ++ I+ C R +D N +F L PD Y+ +M
Sbjct: 499 LISEIMNNGMHL---DIVFFSSIINNLCKLGRVMDAQN-IFDLTVNVGLHPDAVVYSMLM 554
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D Y G +++ V M S +P+++ + L++ Y K D+ +F+ ++ K
Sbjct: 555 DGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIK 614
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAR 380
P+ ++ +I +A A+ F +MT TY I + G N A
Sbjct: 615 PSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYN--IVLRGLFKNRCFDEAI 672
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+F EL + + + TLN M++ EA LF + + P+ TY ++
Sbjct: 673 FLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNL 732
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFF 468
K + E + + M+ G PN R
Sbjct: 733 IKEGLVEEAEDMFSSMQNAGCEPNSRLL 760
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 137/333 (41%), Gaps = 40/333 (12%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
LF M G PD +N LI A+ + L KA+ F +M+ KP++VTY +
Sbjct: 394 LFDLMLGDGIAPDFYTFNVLIKAYAN----CGMLDKAMIIFNEMRD-HGVKPDVVTYRTV 448
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ- 285
+ A + +D F ++ + +APD Y YN ++ + +G + + + ++S + +N
Sbjct: 449 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGM 508
Query: 286 --------------CK--------------------PDIITFNLLIDSYGKRQAFDKMEQ 311
CK PD + +++L+D Y +K +
Sbjct: 509 HLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALR 568
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
VF +++ + +P + + +++ Y K + +F++M PS I Y II
Sbjct: 569 VFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLF 628
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
A+ F E+++ G M + T N +L N EA LF+ M V +
Sbjct: 629 QAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINII 688
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
T + + E + L + ++ +VPN
Sbjct: 689 TLNTMIDGMFQTRRVEEAKDLFASISRSRLVPN 721
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 93/201 (46%), Gaps = 10/201 (4%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y L+ K G+ + LF EM G +P +Y+ +I A K
Sbjct: 584 VYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEM 643
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+ M+ C TYNI+LR + R D+ LFKEL + +I T N ++D
Sbjct: 644 TESGIAMDIC-----TYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMF 698
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+ ++E + + + + ++ P+++T++++I + K ++ E +F S+ ++ +P
Sbjct: 699 QTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEP--- 755
Query: 327 TFNSMIINYGKARLQGKAEYV 347
NS ++N+ L K E V
Sbjct: 756 --NSRLLNHVVRELLKKNEIV 774
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 87/216 (40%), Gaps = 34/216 (15%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
++G+ D+ L +FR M QR T +YS +I + + G+T A F EM SG
Sbjct: 594 KIGRIDEGLS---LFREML-QRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIA 649
Query: 178 PDPSVYNALITAHLHTR--DKAKALAKAL-----------------GYFQKMKGME---- 214
D YN ++ R D+A L K L G FQ + E
Sbjct: 650 MDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 709
Query: 215 -------RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
R PN+VTY+I++ + V++ +F + + P+ N V+ K
Sbjct: 710 FASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLK 769
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR 303
I + LS++ + +T LL+D + +
Sbjct: 770 KNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSK 805
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA-DLLFENSHNMGVTPDSSTYKLLY 437
A F +L + G + + N +LE +C EA D+L + +G PD +Y +L
Sbjct: 143 ALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILL 202
Query: 438 KAYTKANMKELVQKLLKRMEQNGIV--PNKRFFLEALETF 475
K+ LL+ M + G V PN + ++ F
Sbjct: 203 KSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGF 242
>gi|410110059|gb|AFV61109.1| pentatricopeptide repeat-containing protein 123, partial
[Acantholippia salsoloides]
Length = 433
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 143/308 (46%), Gaps = 7/308 (2%)
Query: 134 WMQK--QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
W+QK Q D +YS LI + K A+ +FS ++ SG PD YNA I
Sbjct: 34 WLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAXINVF- 92
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KAK +A +M+ + PN +Y+ LL + + + ++F EL E
Sbjct: 93 ---GKAKLFREARSLISEMR-IAGVMPNTASYSTLLTMYVENKKFLEALSVFSELREMKC 148
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
D+ T N ++D YG+ GM KE + + M+ +P+++++N L+ YG + F +
Sbjct: 149 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 208
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+F+ + + + T+NSM++ YGK KA + Q+M P+ ITY II+++G
Sbjct: 209 LFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQGRGIEPNSITYSTIISIWG 268
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ RA +F +L G ++ M+ AY GL A L + P +
Sbjct: 269 KVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKSPDNIPRDT 328
Query: 432 TYKLLYKA 439
+L A
Sbjct: 329 AIHILAGA 336
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 138/300 (46%), Gaps = 5/300 (1%)
Query: 169 SEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLR 228
EMR+ PD Y+ LIT H K AL + QKM+ +R ++V Y+ L+
Sbjct: 1 DEMRDRALSPDRYTYSTLIT-HF---GKEGLFDAALSWLQKME-QDRVPGDLVLYSNLIE 55
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
+ + + ++F L S PD+ YN ++ +GK + +E S++S M+ P
Sbjct: 56 LSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAXINVFGKAKLFREARSLISEMRIAGVMP 115
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
+ +++ L+ Y + + F + VF L K L T N MI YG+ + +A+ +F
Sbjct: 116 NTASYSTLLTMYVENKKFLEALSVFSELREMKCLLDLTTCNIMIDVYGQLGMAKEADKLF 175
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
M M P+ ++Y ++ +YG + A +F + + + V T N+M+ Y
Sbjct: 176 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 235
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+A+ L + G+ P+S TY + + K + L +++ +G+ ++ F
Sbjct: 236 LEHEKANNLIQEMQGRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILF 295
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 149/320 (46%), Gaps = 5/320 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS LI GK+G A+ +M D +Y+ LI D +KA++
Sbjct: 11 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS-- 68
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F ++K P++V YN + +A+ + +L E+ + + P+ +Y+ ++
Sbjct: 69 --IFSRLK-RSGFTPDLVAYNAXINVFGKAKLFREARSLISEMRIAGVMPNTASYSTLLT 125
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
Y +N E SV S ++ +C D+ T N++ID YG+ + +++F + +P
Sbjct: 126 MYVENKKFLEALSVFSELREMKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEP 185
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ ++N+++ YG A L G+A ++F+ M + +TY ++ +YG +A +
Sbjct: 186 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 245
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
E+ G + T + ++ + G A +LF+ + GV D ++ + AY +A
Sbjct: 246 QEMQGRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERA 305
Query: 444 NMKELVQKLLKRMEQNGIVP 463
+ ++LL ++ +P
Sbjct: 306 GLVAHAKRLLHELKSPDNIP 325
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 149/357 (41%), Gaps = 36/357 (10%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ I V GK R A L SEMR +G P+ + Y+ L+T ++ +
Sbjct: 74 KRSGFTPDLVAYNAXINVFGKAKLFREARSLISEMRIAGVMPNTASYSTLLTMYVENKKF 133
Query: 197 AKALAKALGYFQKMK-----------------------------GMER--CKPNIVTYNI 225
+AL+ ++MK GM + +PN+V+YN
Sbjct: 134 LEALS-VFSELREMKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNT 192
Query: 226 LLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ 285
LLR A + LF+ + + ++ TYN +M YGK ++ +++ M+
Sbjct: 193 LLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQGRG 252
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
+P+ IT++ +I +GK D+ +F+ L S + F +MI+ Y +A L A+
Sbjct: 253 IEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAK 312
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+ ++ +P I + I + + A +F G+ ++ M+ +
Sbjct: 313 RLLHELK----SPDNIPRDTAIHILAGAGRIEEATYVFRRAIDAGEVKDITVFERMIHLF 368
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+F+ +G PDS+ L+ AY K + + + M++ G V
Sbjct: 369 SKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANSVYMEMQEVGCV 425
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 162/343 (47%), Gaps = 13/343 (3%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR-- 194
++R +T Y+ LIA + + G A +M + G PD Y ALI +R
Sbjct: 249 RERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRS 308
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
++AKAL +M E KPN+V Y L+ + N D+ + KE+ + + P+
Sbjct: 309 NEAKAL------LDEMSCAE-LKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPN 361
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
TY+ ++ K G + +L +M + +PD IT+NL+I+ + + + ++
Sbjct: 362 KITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLS 421
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC- 373
+ ++ P + T++ MI ++ KA + ++MT P+ Y +I+ GYC
Sbjct: 422 EMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLIS--GYCR 479
Query: 374 -DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
NVS A EIFD+++K+ + N+++ G E+ F G+ P+ T
Sbjct: 480 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT 539
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
Y L Y K E ++L++RM G+ PN +++ LE++
Sbjct: 540 YSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY 582
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 151/336 (44%), Gaps = 16/336 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS +I + + G+ A L EM G +P+ VY LI+ + R+ +LA + F
Sbjct: 435 YSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGY--CREGNVSLACEI--F 490
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
KM + P++ YN L+ ++ V++ F ++ E L P+ +TY+G++ Y K
Sbjct: 491 DKMTKV-NVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLK 549
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
NG ++ E ++ RM KP+ + + L++SY K +K+ FKS++
Sbjct: 550 NGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRI 609
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECIITMYGYCDNVSRARE--I 382
+ +I N + G E F+ ++ ++ P Y +I+ G C R + I
Sbjct: 610 YGILIHNLSSS---GNMEAAFRVLSGIEKNGSVPDVHVYSSLIS--GLCKTADREKAFGI 664
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
DE+SK G D + NA+++ C +G + A +F + G+ P+ TY L K
Sbjct: 665 LDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCK 724
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
L M GI P+ F L T SS
Sbjct: 725 VGDISNAFYLYNEMLATGITPDA-FVYSVLTTGCSS 759
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 152/371 (40%), Gaps = 39/371 (10%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L E KSD + F+ M Q + D IY LI + G A + S + +
Sbjct: 578 LLESYFKSDDIEKVSSTFKSMLDQ-GVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKN 636
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQ 232
G PD VY++LI+ T D+ KA G +M KG++ PNIV YN L+ +
Sbjct: 637 GSVPDVHVYSSLISGLCKTADR----EKAFGILDEMSKKGVD---PNIVCYNALIDGLCK 689
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+ ++ +F + L P+ TY ++D K G I + + M + PD
Sbjct: 690 SGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFV 749
Query: 293 FNLLIDSYGKRQAFDKMEQVF-KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
+++L + G A D + +F M + ++ +FN+++ + K + + +
Sbjct: 750 YSVL--TTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVI 807
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL------------SKLGKDM------ 393
P+ +T E II+ +S IF EL S L DM
Sbjct: 808 MGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKI 867
Query: 394 KVSTLNAMLEAYCMNGLPTEA----DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
+ ++ M+ +C G +A D++ S MG SS ++ K + E +
Sbjct: 868 PLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGC---SSYLAIVDNLCRKGKLSEAL 924
Query: 450 QKLLKRMEQNG 460
LLK M++ G
Sbjct: 925 N-LLKEMDKRG 934
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 105/243 (43%), Gaps = 10/243 (4%)
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
+ ++AY K + VL M+ C + +T+N+LI + A ++ K +
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
P T+ ++I K+R +A+ + +M+ + P+ + Y +I + N
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
A ++ E+ G T + ++ C G A LL + PD+ TY L+
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG-SQSGSAK--TDLTRS 494
+ + + + K+ +LL ME GI PN + T+S + G QSG + +DL
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGISPN-------VYTYSIMIHGLCQSGEPEKASDLLEE 457
Query: 495 LST 497
++T
Sbjct: 458 MTT 460
>gi|168054024|ref|XP_001779433.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669118|gb|EDQ55711.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 158/373 (42%), Gaps = 6/373 (1%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
W Q L +FRW++ + + Y+ ++ V+ + Q + + +M N+ RPD Y+
Sbjct: 23 WRQALLLFRWLRAEHSSSLNIYTYNVMLKVLRRGRQWEFSQQIAEDMANADVRPDNITYS 82
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
LI+ ++ A+ +F +M C P++VTY+ ++ + D+ AL++
Sbjct: 83 TLISCA----NRCNYQDAAMAWFDRMHE-AGCVPDVVTYSTMIDVYGKMGKYDEAIALYE 137
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
+ ++ PD TY ++ +G+ G I+ S+ MK + +PD I +N++I G+
Sbjct: 138 RVKQAGWKPDKVTYGTMVRLFGRAGYIRAAVSIFEEMKGSGVQPDAIVYNIMIACLGRAG 197
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
+VF+ + KP T ++++ Y + + VFQ++ I Y
Sbjct: 198 RMGHALKVFEEMEREGVKPNAVTLSTVMETYSRCGNVMEGLEVFQRLR-QGVACDVIVYN 256
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
++ M S A + E+++ G T M+ Y G+ EA F
Sbjct: 257 AVLKMCREAGLASEAEQYLREMTESGHQPNDWTYRNMISVYAKKGMAVEAHRTFSQMVEA 316
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQS 484
G D Y L +AY A VQ++L M P++R L S +
Sbjct: 317 GYQIDVMAYTSLLQAYGNAKEYNKVQEILDEMTSVNCAPDERLCCVILNLLDSCDTDEEL 376
Query: 485 GSAKTDLTRSLST 497
G ++ L ST
Sbjct: 377 GILRSCLRMCSST 389
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 142/317 (44%), Gaps = 16/317 (5%)
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
K+ +AL F+ ++ NI TYN++L+ + R + + +++ + + PD T
Sbjct: 21 KSWRQALLLFRWLRAEHSSSLNIYTYNVMLKVLRRGRQWEFSQQIAEDMANADVRPDNIT 80
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y+ ++ + + RM C PD++T++ +ID YGK +D+ +++ +
Sbjct: 81 YSTLISCANRCNYQDAAMAWFDRMHEAGCVPDVVTYSTMIDVYGKMGKYDEAIALYERVK 140
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
+ KP T+ +M+ +G+A A +F++M P I Y +I G +
Sbjct: 141 QAGWKPDKVTYGTMVRLFGRAGYIRAAVSIFEEMKGSGVQPDAIVYNIMIACLGRAGRMG 200
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
A ++F+E+ + G TL+ ++E Y G E +F+ GV D Y +
Sbjct: 201 HALKVFEEMEREGVKPNAVTLSTVMETYSRCGNVMEGLEVFQRLRQ-GVACDVIVYNAVL 259
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPN-------------KRFFLEALETFSSSL-AGSQ 483
K +A + ++ L+ M ++G PN K +EA TFS + AG Q
Sbjct: 260 KMCREAGLASEAEQYLREMTESGHQPNDWTYRNMISVYAKKGMAVEAHRTFSQMVEAGYQ 319
Query: 484 SGS-AKTDLTRSLSTAK 499
A T L ++ AK
Sbjct: 320 IDVMAYTSLLQAYGNAK 336
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 125/260 (48%), Gaps = 7/260 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ + GK K+ + + ++ +++ W D Y ++ + G+ G R A+ +F EM+ S
Sbjct: 119 MIDVYGKMGKYDEAIALYERVKQAGWK-PDKVTYGTMVRLFGRAGYIRAAVSIFEEMKGS 177
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G +PD VYN +I +A + AL F++M+ E KPN VT + ++ ++
Sbjct: 178 GVQPDAIVYNIMIAC----LGRAGRMGHALKVFEEME-REGVKPNAVTLSTVMETYSRCG 232
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
NV + +F+ L + + A D+ YN V+ + G+ E E L M + +P+ T+
Sbjct: 233 NVMEGLEVFQRLRQGV-ACDVIVYNAVLKMCREAGLASEAEQYLREMTESGHQPNDWTYR 291
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+I Y K+ + + F ++ + + + + S++ YG A+ K + + +MT++
Sbjct: 292 NMISVYAKKGMAVEAHRTFSQMVEAGYQIDVMAYTSLLQAYGNAKEYNKVQEILDEMTSV 351
Query: 355 KYTPSFITYECIITMYGYCD 374
P I+ + CD
Sbjct: 352 NCAPDERLCCVILNLLDSCD 371
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 164/361 (45%), Gaps = 10/361 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L ++ + + L ++ M+ +R D +S LI + ++G+ A EMR
Sbjct: 269 MLIGGFCRAGELEEALRFYKEMRGRR-VTPDVVSFSCLIGLFTRRGEMDHAAEYLREMRE 327
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G PD +Y +I +A + +AL +M C P++VTYN LL +
Sbjct: 328 FGLMPDGVIYTMVIGGFC----RAGLMLEALRVRDEMVAFG-CLPDVVTYNTLLNGLCKE 382
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
R + L E+ E + PD+ T+ ++ Y ++G I++ + + +PDI+T+
Sbjct: 383 RRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTY 442
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEK-PTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
N LID ++ K +++ MHS+E P T++ +I ++ + A +M
Sbjct: 443 NTLIDGMCRQGDLGKANELWDD-MHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMV 501
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
P+ +TY II Y NVS+ ++ ++ + T N ++ Y G
Sbjct: 502 NKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMH 561
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYT-KANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
EA L + N V PD+ TY ++ ++ NM+E + K+M GI P++ ++
Sbjct: 562 EAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQE-ADWVYKKMGARGIEPDRYTYMSM 620
Query: 472 L 472
+
Sbjct: 621 I 621
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 166/367 (45%), Gaps = 20/367 (5%)
Query: 107 VRSEHCFL-LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAM 165
V S C + LF G+ D E R M ++ + D IY+ +I + G A+
Sbjct: 299 VVSFSCLIGLFTRRGEMD---HAAEYLREM-REFGLMPDGVIYTMVIGGFCRAGLMLEAL 354
Query: 166 WLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYN 224
+ EM GC PD YN L+ K + L+ A +MK ER P++ T+
Sbjct: 355 RVRDEMVAFGCLPDVVTYNTLLNGLC----KERRLSDAEELLNEMK--ERGVPPDLCTFT 408
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
L+ + N+++ F + + L PDI TYN ++D + G + + + M S
Sbjct: 409 TLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSR 468
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
+ P+ +T+++LIDS+ ++ D +++ P + T+NS+I Y ++ K
Sbjct: 469 EIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKG 528
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS----TLNA 400
+ KM K P ITY +I +GY + E F+ L K+ ++ V T N
Sbjct: 529 QQFLPKMRHDKVMPDLITYNTLI--HGYVKE-GKMHEAFN-LLKIMENENVQPDAVTYNM 584
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
++ + ++G EAD +++ G+ PD TY + + A + +L M Q G
Sbjct: 585 IISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKG 644
Query: 461 IVPNKRF 467
+ P+ +F
Sbjct: 645 LAPDDKF 651
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 157/362 (43%), Gaps = 6/362 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ + L ++ +W + EVFR M D ++ LI + G+ A+ + EMR
Sbjct: 235 VLKGLLRNGRWDKAREVFRAMDAC-GVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGR 293
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
PD ++ LI L TR + A Y ++M+ P+ V Y +++ +A
Sbjct: 294 RVTPDVVSFSCLIG--LFTR--RGEMDHAAEYLREMREFG-LMPDGVIYTMVIGGFCRAG 348
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ + + E+ PD+ TYN +++ K + + E +L+ MK PD+ TF
Sbjct: 349 LMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFT 408
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
LI Y + +K Q F ++ + +P + T+N++I + GKA ++ M +
Sbjct: 409 TLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSR 468
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ P+ +TY +I + V A DE+ G + T N++++ YC +G ++
Sbjct: 469 EIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKG 528
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
+ V PD TY L Y K LLK ME + P+ + +
Sbjct: 529 QQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISG 588
Query: 475 FS 476
FS
Sbjct: 589 FS 590
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 137/333 (41%), Gaps = 40/333 (12%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
+ SEM PD +N ++ A D A+A K KP +VTYN +
Sbjct: 181 VISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSK-----GIKPGLVTYNSV 235
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
L+ + D+ +F+ + +APD+ ++N ++ + + G ++E M+ +
Sbjct: 236 LKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRV 295
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
PD+++F+ LI + +R D + + + P + +I + +A L +A
Sbjct: 296 TPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALR 355
Query: 347 VFQKMTAMKYTPSFITYE-------------------------------CIIT--MYGYC 373
V +M A P +TY C T ++GYC
Sbjct: 356 VRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYC 415
Query: 374 --DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
N+ +A + FD +S + T N +++ C G +A+ L+++ H+ + P+
Sbjct: 416 RDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHV 475
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
TY +L ++ + + L M GIVPN
Sbjct: 476 TYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPN 508
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 123/263 (46%), Gaps = 7/263 (2%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
N T NI++ + + +V+ + E+ + + PD+ T+N ++DA + G ++ +++
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALI 217
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
M S KP ++T+N ++ + +DK +VF+++ P + +FN +I + +A
Sbjct: 218 DSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRA 277
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
+A +++M + TP +++ C+I ++ + A E E+ + G
Sbjct: 278 GELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIY 337
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
++ +C GL EA + + G PD TY L K ++LL M++
Sbjct: 338 TMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKE 397
Query: 459 NGIVPNKRFFLEALETFSSSLAG 481
G+ P+ L TF++ + G
Sbjct: 398 RGVPPD-------LCTFTTLIHG 413
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 63/152 (41%)
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGY 372
++ ++ S + T N M+ +Y K G+ + V +M P +T+ ++
Sbjct: 147 YRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFR 206
Query: 373 CDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
+V A + D + G + T N++L+ NG +A +F GV PD +
Sbjct: 207 AGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRS 266
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ +L + +A E + K M + P+
Sbjct: 267 FNMLIGGFCRAGELEEALRFYKEMRGRRVTPD 298
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 152/337 (45%), Gaps = 10/337 (2%)
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
FR + Y D Y LI + K GQTR A+ L +M RP+ Y+ +I
Sbjct: 147 FRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLC 206
Query: 192 HTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
K + +A AL F + +G+ ++V YN L+ C + L +
Sbjct: 207 ----KDRLIADALRLFSLVTSRGI---LVDVVAYNSLIHGCCSVGQWREATRLLTMMVRG 259
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+ PD YT+N ++DA K G I E + V + M KPDI+T+N L++ + +
Sbjct: 260 NINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEA 319
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
++F ++ +P + +N +I Y K + +A +F+++ P+ TY +I
Sbjct: 320 RELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDG 379
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
+S +E+ DE+ G+ + T N L+A+C + P E + G+ PD
Sbjct: 380 LCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSK-PYEKAISLFRQIVQGIWPD 438
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
Y ++ + + K ++ ++ L+ + +G PN R
Sbjct: 439 FYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVR 475
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 143/325 (44%), Gaps = 8/325 (2%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
R + D Y+ LI GQ R A L + M PD +N L+ A K
Sbjct: 224 RGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALC----KEG 279
Query: 199 ALAKALGYFQKMKGMERC-KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+ +A G F M M+R KP+IVTYN L+ + NV + LF + + L PD+
Sbjct: 280 RIVEAQGVFAVM--MKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLN 337
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN +++ Y K M+ E + ++ P++ T+N LID K ++++ +
Sbjct: 338 YNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMC 397
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
+ P + T+N + + K++ KA +F+++ + P F Y+ I+ + + +
Sbjct: 398 DRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIW-PDFYMYDVIVENFCKGEKLK 456
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
A E L G V T M+ A C + EA L + PD+ T++ +
Sbjct: 457 IAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETII 516
Query: 438 KAYTKANMKELVQKLLKRMEQNGIV 462
A + N + +KL M + G+V
Sbjct: 517 GALQERNETDKAEKLRLEMIERGLV 541
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 154/369 (41%), Gaps = 44/369 (11%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
++ KL+ + + G A+ LFS++ + G P + LI + H + A + LG
Sbjct: 57 VFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFS-LLGT 115
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
KM +PN+VT+N L+ V + A +L D ++Y +++
Sbjct: 116 ILKMGF----QPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLC 171
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF------------- 313
KNG ++ +L +M+ + +P++IT++ +ID K + ++F
Sbjct: 172 KNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVV 231
Query: 314 --KSLMH--------------------SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
SL+H P TFN ++ K +A+ VF M
Sbjct: 232 AYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVM 291
Query: 352 TAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
P +TY + M G+C +NVS ARE+F+ + K G + V N ++ YC
Sbjct: 292 MKRGEKPDIVTYNAL--MEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKID 349
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFL 469
+ EA +LF+ + P+ +TY L K VQ+L+ M G P+ +
Sbjct: 350 MVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYN 409
Query: 470 EALETFSSS 478
L+ F S
Sbjct: 410 IFLDAFCKS 418
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 143/331 (43%), Gaps = 12/331 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA---HLHTRDKAKALAKAL 204
++ LI G AM ++ G D Y +LI + TRD AL
Sbjct: 128 FNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRD-------AL 180
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
QKM+ + +PN++TY+ ++ + R + LF + + D+ YN ++
Sbjct: 181 QLLQKMEE-DLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHG 239
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
G +E +L+ M PD TFN+L+D+ K + + VF +M EKP
Sbjct: 240 CCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPD 299
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ T+N+++ + + +A +F +M P + Y +I Y D V A +F
Sbjct: 300 IVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFK 359
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E+ ++T N++++ C G + L + + G +PD TY + A+ K+
Sbjct: 360 EIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSK 419
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
E L +++ Q GI P+ + +E F
Sbjct: 420 PYEKAISLFRQIVQ-GIWPDFYMYDVIVENF 449
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 105/224 (46%), Gaps = 19/224 (8%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L E S+ + E+F M K R D Y+ LI K AM LF E+R
Sbjct: 306 LMEGFCLSNNVSEARELFNRMVK-RGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCK 364
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGM--ERCK----PNIVTYNILLR 228
P+ + YN+LI L K LG ++ + E C P+IVTYNI L
Sbjct: 365 NLVPNLATYNSLI----------DGLCK-LGRMSCVQELVDEMCDRGQSPDIVTYNIFLD 413
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
A +++ ++ +LF+++ + I PD Y Y+ +++ + K +K E L + + C P
Sbjct: 414 AFCKSKPYEKAISLFRQIVQGIW-PDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCP 472
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
++ T+ ++I++ K +FD+ + + + P TF ++I
Sbjct: 473 NVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETII 516
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 135/365 (36%), Gaps = 83/365 (22%)
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
HLH K + L F +M + P I ++ LL A + + +LF +LH
Sbjct: 26 GHLHP-PKFHTVDDTLLSFNRML-RKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHS 83
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY------GK 302
+ P I T +++ Y + S+L + +P+++TFN LI+ + K
Sbjct: 84 KGITPSIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSK 143
Query: 303 RQAF--DKME---------------------------QVFKSLMHSKEKPTLPTFNSMII 333
AF D M Q+ + + +P L T++++I
Sbjct: 144 AMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVID 203
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD------------------- 374
K RL A +F +T+ + Y +I +G C
Sbjct: 204 GLCKDRLIADALRLFSLVTSRGILVDVVAYNSLI--HGCCSVGQWREATRLLTMMVRGNI 261
Query: 375 ------------------NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
+ A+ +F + K G+ + T NA++E +C++ +EA
Sbjct: 262 NPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARE 321
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
LF G+ PD Y +L Y K +M + L K + +VPN L T++
Sbjct: 322 LFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPN-------LATYN 374
Query: 477 SSLAG 481
S + G
Sbjct: 375 SLIDG 379
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 93/213 (43%), Gaps = 23/213 (10%)
Query: 100 LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG 159
+N Y K+ + +LF+E+ + + + + Y+ LI + K G
Sbjct: 342 INGYCKIDMVDEAMVLFKEI-----------------RCKNLVPNLATYNSLIDGLCKLG 384
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
+ L EM + G PD YN + A K+K KA+ F+++ ++ P+
Sbjct: 385 RMSCVQELVDEMCDRGQSPDIVTYNIFLDAFC----KSKPYEKAISLFRQI--VQGIWPD 438
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
Y++++ + + + L P++ TY +++A K+ E ++LS
Sbjct: 439 FYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLS 498
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
+M N C PD +TF +I + +R DK E++
Sbjct: 499 KMDDNDCPPDAVTFETIIGALQERNETDKAEKL 531
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 77/188 (40%), Gaps = 7/188 (3%)
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGY 372
F ++ P + F+ ++ + A +F ++ + TPS T +I Y +
Sbjct: 43 FNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCH 102
Query: 373 CDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
++S A + + K+G + T N ++ +C+NG+ ++A + G D +
Sbjct: 103 QAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFS 162
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLT 492
Y L K +LL++ME++ + PN L T+S+ + G D
Sbjct: 163 YGSLINGLCKNGQTRDALQLLQKMEEDLVRPN-------LITYSTVIDGLCKDRLIADAL 215
Query: 493 RSLSTAKS 500
R S S
Sbjct: 216 RLFSLVTS 223
>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
[Vitis vinifera]
Length = 644
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 163/345 (47%), Gaps = 20/345 (5%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
++GKS++ + LEVF + +++ I+ + G A +F +M G
Sbjct: 303 KVGKSEEAMDVLEVFNLS-------PNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLI 355
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARN 235
PD Y ++ + K K ++ AL Y KM +G+ +P++ TY +L+ +C + N
Sbjct: 356 PDCFSYTTMMAGYC----KVKDISNALKYLGKMLKRGI---RPSVATYTLLIDSCCKPGN 408
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
++ LF+ + L PD+ +YN +M+ YGK G +++ +LS M+S PD++T+N+
Sbjct: 409 MEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNI 468
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
LI KR ++ + + L P + TF ++I + +A +F M+
Sbjct: 469 LIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHH 528
Query: 356 YTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P +T C + GYC ++ A +F ++ G V N+++ +C G +
Sbjct: 529 LEPDVVT--CSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDD 586
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
A L G+ P++ T+ L Y K ++ V++ +++Q
Sbjct: 587 ACHLVSMMIEHGIMPNNITHHALVLGYEKKCVENPVERAAFKLQQ 631
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 141/324 (43%), Gaps = 20/324 (6%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y L+ K+ T++A+ L +MR+ P V N+L+ A L +++ L A +
Sbjct: 153 VYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALL----ESEQLNLAWDF 208
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
++MK + N ++ + N+D L E+ + PD+ Y V+D+
Sbjct: 209 LKEMKS-QGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLC 267
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K ++KE S+L +M D ++ + ++D Y K K E+ L P +
Sbjct: 268 KMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCK---VGKSEEAMDVLEVFNLSPNIF 324
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
FNS I KA VFQ M M P +Y + M GYC + ++I + L
Sbjct: 325 VFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTM--MAGYC----KVKDISNAL 378
Query: 387 SKLGKDMK------VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
LGK +K V+T ++++ C G A+ LF+ G+ PD +Y L Y
Sbjct: 379 KYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGY 438
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
K + +LL M G+ P+
Sbjct: 439 GKKGHLQKAFELLSMMRSAGVSPD 462
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 110/260 (42%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
PNI +N + N+ + +F+++ E L PD ++Y +M Y K I
Sbjct: 321 PNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKY 380
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L +M +P + T+ LLIDS K + E +F+ ++ P + ++N+++ YGK
Sbjct: 381 LGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGK 440
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
KA + M + +P +TY +I V+ A++I DEL++ G V T
Sbjct: 441 KGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVT 500
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
++ + G EA LLF + PD T L Y + L +M
Sbjct: 501 FTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKML 560
Query: 458 QNGIVPNKRFFLEALETFSS 477
G+ + + + F S
Sbjct: 561 DAGLKADVILYNSLIHGFCS 580
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 151/320 (47%), Gaps = 8/320 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + + LA+ F ++ +G R + + N L+ + +AL L
Sbjct: 117 YAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRT 176
Query: 208 QKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHE--SILAPDIYTYNGVMDA 264
++ C P++ +Y+ILL++ C Q ++ Q + L + + E ++ +P++ YN V+D
Sbjct: 177 PELG----CVPDVFSYSILLKSLCDQGKS-GQADDLLRMMAEGGAVCSPNVVAYNTVIDG 231
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ K G + + + M PD++T+N ++ + K +A DK E + +++ + P
Sbjct: 232 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 291
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
T+N++I Y +A VF++M P +T ++ + AR++FD
Sbjct: 292 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 351
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
++ G++ V + N ML Y G + LF+ G+ PD T+ +L KAY
Sbjct: 352 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 411
Query: 445 MKELVQKLLKRMEQNGIVPN 464
M + + M +G+ P+
Sbjct: 412 MLDKAMIIFNEMRDHGVKPD 431
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 161/389 (41%), Gaps = 45/389 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI-YSKLIAVMGKKGQTRLAMWLFSEMR 172
+L + L K Q ++ R M + + + Y+ +I K+G A LF EM
Sbjct: 190 ILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMV 249
Query: 173 NSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
G PD YN+++ H KA+A+ KA + ++M +R PN TYN L+ +
Sbjct: 250 QRGIPPDLVTYNSVV----HALCKARAMDKAEAFLRQMVN-KRVLPNNWTYNNLIYGYSS 304
Query: 233 ARNVDQVNALFKELH-ESILA----------------------------------PDIYT 257
+ +FKE+ SIL PD+++
Sbjct: 305 TGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 364
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN +++ Y G + +M + M + PD TFN+LI +Y DK +F +
Sbjct: 365 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMR 424
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
KP + T+ ++I + A F +M P Y C+I G+C + S
Sbjct: 425 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQ--GFCTHGS 482
Query: 378 --RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+A+E+ E+ G + + ++++ C G +A +F+ + N+G+ PD+ Y +
Sbjct: 483 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNM 542
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L Y E ++ M GI PN
Sbjct: 543 LMDGYCLVGKMEKALRVFDAMVSAGIEPN 571
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 136/295 (46%), Gaps = 11/295 (3%)
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM-KGMERCKPNIVTYNILLRACAQA 233
GC PD Y+ L+ + D+ K+ +A + M +G C PN+V YN ++ +
Sbjct: 180 GCVPDVFSYSILLKSLC---DQGKS-GQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKE 235
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+V++ LFKE+ + + PD+ TYN V+ A K + + E+ L +M + + P+ T+
Sbjct: 236 GDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTY 295
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM---IINYGKARLQGKAEYVFQK 350
N LI Y + + +VFK + P + T + + + YGK + +A VF
Sbjct: 296 NNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIK---EARDVFDT 352
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M P +Y ++ Y + ++FD + G T N +++AY G+
Sbjct: 353 MAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGM 412
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+A ++F + GV PD TY+ + A + + + +M G+ P+K
Sbjct: 413 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 467
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 141/340 (41%), Gaps = 6/340 (1%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
+ +W + + VF+ M++ + D S L+ + K G+ + A +F M G PD
Sbjct: 305 TGQWKEAVRVFKEMRRHSI-LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 363
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
YN ++ + L F M G + P+ T+N+L++A A +D+
Sbjct: 364 SYNIMLNGYA----TKGCLVDMTDLFDLMLG-DGIAPDFYTFNVLIKAYANCGMLDKAMI 418
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
+F E+ + + PD+ TY V+ A + G + + ++M PD +N LI +
Sbjct: 419 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFC 478
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
+ K +++ +M++ + F+S+I N K A+ +F + P +
Sbjct: 479 THGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 538
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
Y ++ Y + +A +FD + G + V ++ YC G E LF
Sbjct: 539 VYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM 598
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
G+ P + Y ++ +A + M ++GI
Sbjct: 599 LQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGI 638
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 140/335 (41%), Gaps = 5/335 (1%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E F + + + Y+ LI GQ + A+ +F EMR PD + L+ +
Sbjct: 277 EAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGS 336
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
K + +A F M M+ P++ +YNI+L A + + LF +
Sbjct: 337 LC----KYGKIKEARDVFDTM-AMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD 391
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+APD YT+N ++ AY GM+ + + + M+ + KPD++T+ +I + + D
Sbjct: 392 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 451
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
+ F ++ P +N +I + KA+ + ++ + + II
Sbjct: 452 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 511
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
V A+ IFD +G N +++ YC+ G +A +F+ + G+ P+
Sbjct: 512 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 571
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y L Y K + L + M Q GI P+
Sbjct: 572 VVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPS 606
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 134/328 (40%), Gaps = 11/328 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y +IA + + G+ AM F++M + G PD YN LI KA K
Sbjct: 431 DVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKA--KE 488
Query: 204 LGYFQKMKGMERCKPNIVTYN-ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
L GM +IV ++ I+ C R +D N +F L PD YN +M
Sbjct: 489 LISEIMNNGMHL---DIVFFSSIINNLCKLGRVMDAQN-IFDLTVNVGLHPDAVVYNMLM 544
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D Y G +++ V M S +P+++ + L++ Y K D+ +F+ ++ K
Sbjct: 545 DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIK 604
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAR 380
P+ ++ +I +A A+ F +MT TY I + G N A
Sbjct: 605 PSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYN--IVLRGLFKNRCFDEAI 662
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+F EL + + + TLN M++ EA LF + + P TY ++
Sbjct: 663 FLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNL 722
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFF 468
K + E + + M+ G PN R
Sbjct: 723 IKEGLVEEAEDMFSSMQNAGCEPNSRLL 750
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 137/333 (41%), Gaps = 40/333 (12%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
LF M G PD +N LI A+ + L KA+ F +M+ KP++VTY +
Sbjct: 384 LFDLMLGDGIAPDFYTFNVLIKAYAN----CGMLDKAMIIFNEMRD-HGVKPDVVTYRTV 438
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ- 285
+ A + +D F ++ + +APD Y YN ++ + +G + + + ++S + +N
Sbjct: 439 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGM 498
Query: 286 --------------CK--------------------PDIITFNLLIDSYGKRQAFDKMEQ 311
CK PD + +N+L+D Y +K +
Sbjct: 499 HLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALR 558
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
VF +++ + +P + + +++ Y K + +F++M PS I Y II
Sbjct: 559 VFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLF 618
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
A+ F E+++ G M + T N +L N EA LF+ M V +
Sbjct: 619 EAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINII 678
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
T + + E + L + ++ +VP+
Sbjct: 679 TLNTMIDGMFQTRRVEEAKDLFASISRSRLVPS 711
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 10/200 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y L+ K G+ + LF EM G +P +Y+ +I A K
Sbjct: 575 YGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMT 634
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ M+ C TYNI+LR + R D+ LFKEL + +I T N ++D +
Sbjct: 635 ESGIAMDIC-----TYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQ 689
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
++E + + + + ++ P ++T++++I + K ++ E +F S+ ++ +P
Sbjct: 690 TRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEP---- 745
Query: 328 FNSMIINYGKARLQGKAEYV 347
NS ++N+ L K E V
Sbjct: 746 -NSRLLNHVVRELLKKNEIV 764
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 87/216 (40%), Gaps = 34/216 (15%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
++G+ D+ L +FR M QR T +YS +I + + G+T A F EM SG
Sbjct: 584 KIGRIDEGLS---LFREML-QRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIA 639
Query: 178 PDPSVYNALITAHLHTR--DKAKALAKAL-----------------GYFQKMKGME---- 214
D YN ++ R D+A L K L G FQ + E
Sbjct: 640 MDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 699
Query: 215 -------RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
R P++VTY+I++ + V++ +F + + P+ N V+ K
Sbjct: 700 FASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLK 759
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR 303
I + LS++ + +T LL+D + +
Sbjct: 760 KNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSK 795
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA-DLLFENSHNMGVTPDSSTYKLLY 437
A F +L + G + + N +LE +C EA D+L + +G PD +Y +L
Sbjct: 133 ALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILL 192
Query: 438 KAYTKANMKELVQKLLKRMEQNGIV--PNKRFFLEALETF 475
K+ LL+ M + G V PN + ++ F
Sbjct: 193 KSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGF 232
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 165/360 (45%), Gaps = 49/360 (13%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL--HTRDKAKALA 201
D YS +I + G+ A + ++M +SGC PD + +N LI A + ++A LA
Sbjct: 335 DVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLA 394
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+ L +KG+ PN+ T+NIL+ A + + LF+E+ S PD TYN +
Sbjct: 395 REL----TVKGL---SPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNIL 447
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+D +G + + +L M+ + C +T+N +ID KR+ ++ E+VF + +
Sbjct: 448 IDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGI 507
Query: 322 KPTLPTFNSMIINYGKA-RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
TFN++I A R+ AE V Q M + P+ +TY I+T Y N+S+A
Sbjct: 508 GRNAITFNTLIDGLCNAERIDDAAELVDQ-MISEGLQPNNVTYNSILTHYCKQGNISKAA 566
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYC----------------MNGL-PT----------- 412
+I ++ G ++ V T ++ C M G+ PT
Sbjct: 567 DILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSL 626
Query: 413 -------EADLLFENSHNMGVTPDSSTYKLLYKAYTKAN--MKELVQKLLKRMEQNGIVP 463
+A LF +G PD+ TYK++++ + +KE L++ M NG +P
Sbjct: 627 FRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVE-MADNGFIP 685
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 144/326 (44%), Gaps = 7/326 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +S + + + G A+ + M GC PD Y+ +I + + L +A
Sbjct: 300 DRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGE----LEEA 355
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
G +M C P+ T+N L+ A +++ L +EL L+P++YT+N +++
Sbjct: 356 KGIVNQMVD-SGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILIN 414
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
A K G + MKS+ C PD +T+N+LID+ K + K + S
Sbjct: 415 ALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQ 474
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T+N++I K R +AE VF +M + IT+ +I + + A E+
Sbjct: 475 STVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELV 534
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNG-LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
D++ G T N++L YC G + AD+L + N G D TY L K
Sbjct: 535 DQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTAN-GFEVDVVTYATLINGLCK 593
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFF 468
A + KLL+ M G+ P + +
Sbjct: 594 ARRTQAALKLLRGMRMKGMKPTPKAY 619
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 156/377 (41%), Gaps = 30/377 (7%)
Query: 94 EPLVRTLNKYVKVV----RSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYS 149
EP V T N + + ++ L+ EE+ D D ++
Sbjct: 193 EPDVVTFNTVIDALCRARQARTAVLMLEEMSSCD-----------------VAPDETTFT 235
Query: 150 KLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQK 209
L+ ++G A+ L + M GC P N LI + K + ALGY Q+
Sbjct: 236 TLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYC----KLGRVGDALGYIQQ 291
Query: 210 --MKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
G E P+ VT++ + Q +VD + + + PD+YTY+ V++
Sbjct: 292 EIADGFE---PDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCN 348
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
NG ++E + ++++M + C PD TFN LI + ++ + + L P + T
Sbjct: 349 NGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYT 408
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
FN +I K A +F++M + TP +TY +I +++A ++ E+
Sbjct: 409 FNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEME 468
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G T N +++ C EA+ +F+ G+ ++ T+ L A +
Sbjct: 469 VSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERID 528
Query: 448 LVQKLLKRMEQNGIVPN 464
+L+ +M G+ PN
Sbjct: 529 DAAELVDQMISEGLQPN 545
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 130/324 (40%), Gaps = 8/324 (2%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y ++I +G G L L EMR G V L+ + + + + + A
Sbjct: 92 VYEEIIRKLGTAGAFDLMKVLVGEMRREG----HEVGLGLVQSFIGSYARLQLFDDAFDL 147
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
M + N YN LL A+ + + + + E+ + PD+ T+N V+DA
Sbjct: 148 VSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALC 207
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+ + +L M S PD TF L++ + + + + ++ + PT
Sbjct: 208 RARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSV 267
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFD 384
T N +I Y K G A Q+ A + P +T+ + G C N V A ++
Sbjct: 268 TVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVN--GLCQNGHVDHALKVLG 325
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ + G + V T + ++ C NG EA + + G PD++T+ L A N
Sbjct: 326 LMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTEN 385
Query: 445 MKELVQKLLKRMEQNGIVPNKRFF 468
E L + + G+ PN F
Sbjct: 386 QLEEALDLARELTVKGLSPNVYTF 409
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 44/250 (17%), Positives = 86/250 (34%), Gaps = 36/250 (14%)
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK-- 308
L P Y ++ G G M+ ++ M+ + + I SY + Q FD
Sbjct: 86 LTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAF 145
Query: 309 ----------------------------------MEQVFKSLMHSKEKPTLPTFNSMIIN 334
+E + + +P + TFN++I
Sbjct: 146 DLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDA 205
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
+AR A + ++M++ P T+ ++ + ++ A + +S++G
Sbjct: 206 LCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPT 265
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
T+N ++ YC G +A + G PD T+ + + K+L
Sbjct: 266 SVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLG 325
Query: 455 RMEQNGIVPN 464
M Q G P+
Sbjct: 326 LMLQEGCEPD 335
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 156/333 (46%), Gaps = 11/333 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + K GQT A+ L + +P+ +YN +I + K K + +A +
Sbjct: 180 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMC----KVKLVNEAFDLY 235
Query: 208 QKM--KGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
+M KG+ P++VTYN L+ C + D + K + E+I P++YT+N ++D
Sbjct: 236 SEMVSKGIS---PDVVTYNALISGFCIVGKMKDATDLFNKMIFENI-NPNVYTFNILVDG 291
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ K +KE ++VL+ M KPD+ T+N L+D Y + +K + +F ++ P
Sbjct: 292 FCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPN 351
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ +++ MI + K + +A +F++M P +TY +I +S A ++ D
Sbjct: 352 IHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVD 411
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E+ G T N++L+A C N +A L + G+ PD TY L K
Sbjct: 412 EMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNG 471
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
E + + + + G + + + ++ F S
Sbjct: 472 RLEDARIVFEDLLVKGYILDVNIYTAMIQGFCS 504
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 155/353 (43%), Gaps = 46/353 (13%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ +I M K A L+SEM + G PD YNALI+ + A
Sbjct: 214 MYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFC----IVGKMKDATDL 269
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F KM E PN+ T+NIL+ + R + + + + + + PD++TYN +MD Y
Sbjct: 270 FNKMI-FENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYC 328
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+ + + + + + P+I +++++I + K + D+ +FK + + P +
Sbjct: 329 LVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVV 388
Query: 327 TFNSMI--------INYG---------------------------KARLQGKAEYVFQKM 351
T+NS+I I+Y K KA + KM
Sbjct: 389 TYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKM 448
Query: 352 TAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
P TY ++ G C N + AR +F++L G + V+ AM++ +C +G
Sbjct: 449 KDEGIQPDICTYTTLVD--GLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHG 506
Query: 410 LPTEA-DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
L E+ DLL + N G P++ TY+++ + + + +KLL+ M G+
Sbjct: 507 LFDESLDLLSKMEEN-GCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/351 (19%), Positives = 129/351 (36%), Gaps = 51/351 (14%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L KS+ + + + R M+ +D I S LI + GQ L+ + +++ G P
Sbjct: 82 LVKSNHYSTVVSLHRQMEFN-GITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEP 140
Query: 179 DPSVYNALITA-----HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
+ LI +H + ALG+ N V+Y L+ +
Sbjct: 141 NVITLTTLIKGLCLKGQIHQALQFHDKVVALGF----------HLNKVSYGTLINGLCKV 190
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
L + + ++ P++ YN ++D+ K ++ E + S M S PD++T+
Sbjct: 191 GQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTY 250
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N LI + +F ++ P + TFN ++ + K R +A+ V M
Sbjct: 251 NALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMK 310
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P TY N++++ YC+ +
Sbjct: 311 QGIKPDVFTY-----------------------------------NSLMDRYCLVKEVNK 335
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A +F GV P+ +Y ++ + K + L K M N I+P+
Sbjct: 336 AKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPD 386
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ K K + + +F+ M I D Y+ LI + K G+ A+ L EM +
Sbjct: 357 IMIHGFCKIKKVDEAMNLFKEMHCNNI-IPDVVTYNSLIDGLCKLGKISYALKLVDEMHD 415
Query: 174 SGCRPDPSVYNALITAHL--HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
G D YN+++ A H DKA AL KMK E +P+I TY L+
Sbjct: 416 RGVPHDKITYNSILDALCKNHQVDKAIAL------LTKMKD-EGIQPDICTYTTLVDGLC 468
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ ++ +F++L D+ Y ++ + +G+ E +LS+M+ N C P+ +
Sbjct: 469 KNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAV 528
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLM 317
T+ ++I S + DK E++ + ++
Sbjct: 529 TYEIIICSLFDKDENDKAEKLLREMI 554
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/258 (18%), Positives = 110/258 (42%)
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F ++ + KP+I + +L + ++ + V +L +++ + + D+ + +++ +
Sbjct: 59 FNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFS 118
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+ G SVL+++ +P++IT LI + + Q ++
Sbjct: 119 QLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKV 178
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
++ ++I K A + +++ P+ + Y II V+ A +++ E+
Sbjct: 179 SYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 238
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
G V T NA++ +C+ G +A LF + P+ T+ +L + K
Sbjct: 239 VSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRL 298
Query: 447 ELVQKLLKRMEQNGIVPN 464
+ + +L M + GI P+
Sbjct: 299 KEAKNVLAMMMKQGIKPD 316
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 161/358 (44%), Gaps = 48/358 (13%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + K GQT A+ L + +P+ +YN +I + K K + +A +
Sbjct: 164 YGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMC----KVKLVNEAFDLY 219
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M KG+ P++VTY+ L+ ++ LF ++ + PD+YT++ ++D +
Sbjct: 220 SEMVSKGIS---PDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGF 276
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G +KE ++VL+ M KPD++T+ L+D Y + +K + +F ++ +
Sbjct: 277 CKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANV 336
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIF 383
++N MI + K + +A +F++M P +TY +I G C + +S A ++
Sbjct: 337 QSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLID--GLCKSGKISYALKLV 394
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
DE+ G T N++L+A C N +A L + G+ PD TY +L K
Sbjct: 395 DEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKG 454
Query: 444 N--------MKELVQK---------------------------LLKRMEQNGIVPNKR 466
++L+ K LL +ME NG +PN +
Sbjct: 455 GRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAK 512
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 174/408 (42%), Gaps = 36/408 (8%)
Query: 91 SDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWY---IADTGI 147
D+ LV + N+ + + + F + LG K + C + + ++ + +D
Sbjct: 35 DDEHSLVSSFNRILNINPTPPIFEFGKILGSLVK-INCYQTAISLHREMEFNGIASDLVT 93
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA---------HLHTRDKAK 198
++ LI + G T + +F+ + G P+ LI LH DK
Sbjct: 94 FNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVV 153
Query: 199 ALA----------------------KALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
AL AL +++ G + +PN+V YN ++ + + + V
Sbjct: 154 ALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDG-KLVQPNVVMYNTIIDSMCKVKLV 212
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
++ L+ E+ ++PD+ TY+ ++ + G + + + ++M S + PD+ TF++L
Sbjct: 213 NEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSIL 272
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
+D + K + + V +M KP + T+ S++ Y + KA+ +F M
Sbjct: 273 VDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGV 332
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
T + +Y +I + V A +F E+ V T N++++ C +G + A
Sbjct: 333 TANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALK 392
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L + H+ GV D TY + A K + + LL +M+ GI P+
Sbjct: 393 LVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPD 440
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 156/355 (43%), Gaps = 48/355 (13%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ +I M K A L+SEM + G PD Y+ALI+ L A+G
Sbjct: 198 MYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFC----ILGKLNDAIGL 253
Query: 207 FQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
F KM E P++ T++IL+ C + R + N L + + I PD+ TY +MD Y
Sbjct: 254 FNKMIS-EEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGI-KPDVVTYCSLMDGY 311
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK-PT 324
+ + +S+ + M ++ ++N++I+ + K + D+ +FK MH K P
Sbjct: 312 CLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKE-MHCKNIIPD 370
Query: 325 LPTFNSMI--------INYG---------------------------KARLQGKAEYVFQ 349
+ T+NS+I I+Y K KA +
Sbjct: 371 VVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLT 430
Query: 350 KMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
KM P TY +I G C + A+ IF++L G ++ V T M++ +C
Sbjct: 431 KMKDEGIQPDMYTYTILID--GLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCD 488
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
N L +A L + G P++ TY+++ + + + ++ +KLL+ M G++
Sbjct: 489 NDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLL 543
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 152/329 (46%), Gaps = 9/329 (2%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA--HLHTRD 195
Q + D Y+ +I + K G+ A + ++M + GC PD + +N LI A + +
Sbjct: 330 QEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLE 389
Query: 196 KAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
+A LA+ L +KG+ P++ T+NIL+ A + + LF+E+ S PD
Sbjct: 390 EALDLAREL----TVKGL---SPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDE 442
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
TYN ++D G + +L+ M+SN C +T+N +ID+ K+ ++ E+VF
Sbjct: 443 VTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQ 502
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
+ + TFN++I KA+ A + ++M P+ ITY I+T Y N
Sbjct: 503 MDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGN 562
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+ +A +I + ++ G ++ V T ++ C G A L G+ P Y
Sbjct: 563 IKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNP 622
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ ++ + N L + M + G P+
Sbjct: 623 VIQSLFRRNNLRDALNLFREMTEVGEPPD 651
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 153/338 (45%), Gaps = 17/338 (5%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ + + + G A+ + M G PD YN +I + K L +A
Sbjct: 301 DQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVI----NCLSKNGELDEA 356
Query: 204 LGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
G +M ++R C P+ T+N L+ A + +++ L +EL L+PD+YT+N ++
Sbjct: 357 KGIVNQM--VDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILI 414
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID---SYGK-RQAFDKMEQVFKSLMH 318
+A K G + MKS+ C PD +T+N+LID S GK A D + + M
Sbjct: 415 NALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNE-----ME 469
Query: 319 SKEKP-TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
S P + T+N++I K +AE VF +M A + S +T+ +I +
Sbjct: 470 SNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRID 529
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
A E+ +++ K G T N++L YC G +A + E G D TY L
Sbjct: 530 DATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLI 589
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
KA ++ KLL+ M GI P + + +++
Sbjct: 590 NGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSL 627
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 139/306 (45%), Gaps = 8/306 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++ LI + K G L + LF EM++SGC PD YN LI HL + K L A
Sbjct: 406 DVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILID-HLCSMGK---LGNA 461
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L +M+ C + VTYN ++ A + +++ +F ++ ++ T+N ++D
Sbjct: 462 LDLLNEMES-NGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLID 520
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K I + ++ +M +P+ IT+N ++ Y K+ K + +++ + +
Sbjct: 521 GLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEI 580
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T+ ++I KA A + + M P+ Y +I +N+ A +F
Sbjct: 581 DVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLF 640
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEA--DLLFENSHNMGVTPDSSTYKLLYKAYT 441
E++++G+ T + + C G P + D L E N G P+ S++++L +
Sbjct: 641 REMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMV-NKGFMPEFSSFRMLAEGLL 699
Query: 442 KANMKE 447
M +
Sbjct: 700 NLGMDD 705
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 142/331 (42%), Gaps = 8/331 (2%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
+ + +Y +++ +G G L L EMR G + V + + ++ R A+
Sbjct: 85 FAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAV 144
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
L Q + + V +N LL + + + +++ E+ + PD+ T N
Sbjct: 145 DLVLN--QLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNT 202
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ A + ++ +L M S+ PD TF L+ + + + + +V +M +
Sbjct: 203 LIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAG 262
Query: 321 EKPTLPTFNSMIINYGK-ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VS 377
PT T N +I Y K R++ Y+ Q++ A + P +TY + +G C N VS
Sbjct: 263 CSPTGVTVNVLINGYCKMGRVEDALGYIQQEI-ADGFEPDQVTYNTFV--HGLCQNGHVS 319
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
A ++ D + + G D V T N ++ NG EA + + G PD++T+ L
Sbjct: 320 HALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLI 379
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
A + N E L + + G+ P+ F
Sbjct: 380 VALSSQNRLEEALDLARELTVKGLSPDVYTF 410
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 158/374 (42%), Gaps = 7/374 (1%)
Query: 89 SFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLE-VFRWMQKQRWYI-ADTG 146
+F E LVR + + VR+ E + ++ ++ V + + + ADT
Sbjct: 104 AFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTV 163
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+++ L+ V+ + + +L +++EM G +PD N LI A +A + A+
Sbjct: 164 VFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALC----RAHQVRTAVLM 219
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
++M P+ T+ L++ + +++ + ++ E+ +P T N +++ Y
Sbjct: 220 LEEMSS-HGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYC 278
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K G +++ + + ++ +PD +T+N + + +V ++ P +
Sbjct: 279 KMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVF 338
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T+N++I K +A+ + +M P T+ +I + + A ++ EL
Sbjct: 339 TYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLAREL 398
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
+ G V T N ++ A C G P LFE + G TPD TY +L
Sbjct: 399 TVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKL 458
Query: 447 ELVQKLLKRMEQNG 460
LL ME NG
Sbjct: 459 GNALDLLNEMESNG 472
>gi|413926076|gb|AFW66008.1| hypothetical protein ZEAMMB73_411794 [Zea mays]
Length = 633
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 139/317 (43%), Gaps = 29/317 (9%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT-----AHLHTRDKA----- 197
Y+ +I +GK A+++ S+M S CRP+ Y+ ++ LH ++
Sbjct: 291 YNTVIEALGKNKMVDEAIFMLSKMIESDCRPNQFTYSIMLDVLSTGGQLHRLNEILDICS 350
Query: 198 ------------KALAK------ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQV 239
KAL K A F +M K + + +L A A +
Sbjct: 351 GCLNRPVYSYLIKALCKSGHASEAHSVFCRMWNSHE-KGDRYAFVSMLEALCNAEKTTEA 409
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
L + E + D+ YN + A GK + M S+ M++N PD+ T+N++I S
Sbjct: 410 IDLLHMMPEKGITTDVGMYNMIFSALGKLKQVSFMSSLYDTMRANGVVPDVFTYNIMISS 469
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
+G+ DK ++F+ + KP + T+NSMI GK +A +F+ M Y P
Sbjct: 470 FGRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPD 529
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
TY +I +G + V A +FDE+ G + T N +L+ G TEA +E
Sbjct: 530 VFTYSILIECFGKSNKVDMACSLFDEMVAQGCIPNIVTYNILLDCLERRGKTTEAHKFYE 589
Query: 420 NSHNMGVTPDSSTYKLL 436
G+TPDS TY +L
Sbjct: 590 TLKQQGLTPDSITYSIL 606
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 156/351 (44%), Gaps = 9/351 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L L K+ Q +VF M KQ + D Y+ LI + GK G+T + L EM +
Sbjct: 223 MLLNALAKAGMVDQAYQVFEDM-KQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEMVS 281
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
GC + YN +I A K K + +A+ KM + C+PN TY+I+L +
Sbjct: 282 EGCVLNLIAYNTVIEA----LGKNKMVDEAIFMLSKMIESD-CRPNQFTYSIMLDVLSTG 336
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ ++N + ++ L +Y+Y ++ A K+G E SV RM ++ K D F
Sbjct: 337 GQLHRLNEIL-DICSGCLNRPVYSY--LIKALCKSGHASEAHSVFCRMWNSHEKGDRYAF 393
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
++++ + + + + + +N + GK + ++ M A
Sbjct: 394 VSMLEALCNAEKTTEAIDLLHMMPEKGITTDVGMYNMIFSALGKLKQVSFMSSLYDTMRA 453
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P TY +I+ +G V +A E+F+E+ V T N+M+ NG E
Sbjct: 454 NGVVPDVFTYNIMISSFGRVGLVDKASELFEEMEDGSCKPDVVTYNSMINCLGKNGDLDE 513
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A +LF++ G PD TY +L + + K+N ++ L M G +PN
Sbjct: 514 AHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMVAQGCIPN 564
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 113/215 (52%), Gaps = 6/215 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ E L ++K + +++ M ++ D G+Y+ + + +GK Q L+ MR +
Sbjct: 396 MLEALCNAEKTTEAIDLLH-MMPEKGITTDVGMYNMIFSALGKLKQVSFMSSLYDTMRAN 454
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G PD YN +I++ + + KA F++M+ CKP++VTYN ++ +
Sbjct: 455 GVVPDVFTYNIMISSF----GRVGLVDKASELFEEMED-GSCKPDVVTYNSMINCLGKNG 509
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
++D+ + LFK++ E PD++TY+ +++ +GK+ + S+ M + C P+I+T+N
Sbjct: 510 DLDEAHMLFKDMQEKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMVAQGCIPNIVTYN 569
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFN 329
+L+D +R + + +++L P T++
Sbjct: 570 ILLDCLERRGKTTEAHKFYETLKQQGLTPDSITYS 604
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 136/346 (39%), Gaps = 43/346 (12%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
L+ + + AM L +EM G + S N L+ + + L A + ++
Sbjct: 125 LVLLFSNRADPAEAMRLIAEMERDGVPGNISTVNLLVGMGVEV---GRCLDLASKWGLRL 181
Query: 211 KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
G TY L++A ++R V + +++++ DI+ YN +++A K GM
Sbjct: 182 NG--------YTYKCLVQAHLRSREVWKGFEVYEKMRRKGYKLDIFAYNMLLNALAKAGM 233
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
+ + V MK N C PD T+ +LI GK K + + ++ L +N+
Sbjct: 234 VDQAYQVFEDMKQNYCDPDAYTYTILIRMSGKAGKTTKFVSLLEEMVSEGCVLNLIAYNT 293
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD------ 384
+I GK ++ +A ++ KM P+ TY ++ + + R EI D
Sbjct: 294 VIEALGKNKMVDEAIFMLSKMIESDCRPNQFTYSIMLDVLSTGGQLHRLNEILDICSGCL 353
Query: 385 ----------ELSKLGKDMKVSTL----------------NAMLEAYCMNGLPTEADLLF 418
L K G + ++ +MLEA C TEA L
Sbjct: 354 NRPVYSYLIKALCKSGHASEAHSVFCRMWNSHEKGDRYAFVSMLEALCNAEKTTEAIDLL 413
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G+T D Y +++ A K + L M NG+VP+
Sbjct: 414 HMMPEKGITTDVGMYNMIFSALGKLKQVSFMSSLYDTMRANGVVPD 459
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
LGK+ + +F+ MQ ++ Y D YS LI GK + +A LF EM GC P
Sbjct: 505 LGKNGDLDEAHMLFKDMQ-EKGYDPDVFTYSILIECFGKSNKVDMACSLFDEMVAQGCIP 563
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLR 228
+ YN L+ L R K +A +++ +K + P+ +TY+IL R
Sbjct: 564 NIVTYNILLDC-LERRGKT---TEAHKFYETLK-QQGLTPDSITYSILER 608
>gi|22330179|ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
gi|75216707|sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g51965, mitochondrial; Flags: Precursor
gi|4220445|gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolog from
Arabidopsis thaliana BAC gb|AC003673 [Arabidopsis
thaliana]
gi|332194619|gb|AEE32740.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
Length = 650
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 164/373 (43%), Gaps = 31/373 (8%)
Query: 108 RSEHCF-LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMW 166
R E+ + ++ +G+ K + + +F M + + G Y+ L+ V+ K A+
Sbjct: 268 RDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVG-YNTLMQVLAKGKMVDKAIQ 326
Query: 167 LFSEMRNSGCRPDPSVYNAL------------------ITAHLHTRDKAKALAKALGYFQ 208
+FS M +GCRP+ Y+ L I+ T+ L + L
Sbjct: 327 VFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLG 386
Query: 209 KMKGMERCKPNIVTYNI----------LLRACAQARNVDQVNALFKELHESILAPDIYTY 258
+ R ++ ++ + L C + ++ + L K +HE + D Y
Sbjct: 387 HVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSK-IHEKGVVTDTMMY 445
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N V A GK I + + +MK + PDI T+N+LI S+G+ D+ +F+ L
Sbjct: 446 NTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELER 505
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
S KP + ++NS+I GK +A F++M P +TY ++ +G + V
Sbjct: 506 SDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEM 565
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A +F+E+ G + T N +L+ NG EA L+ G+TPDS TY +L +
Sbjct: 566 AYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLER 625
Query: 439 AYTKANMKELVQK 451
+ ++ K +++
Sbjct: 626 LQSVSHGKSRIRR 638
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 179/435 (41%), Gaps = 53/435 (12%)
Query: 84 RVLMRSFSDKEPLVRTLNKYVKVVRSEHCF------LLFEELGKSDKWLQCLEVFRWMQK 137
+ L++++ + + Y ++ R H +L + L K +K Q VF M+K
Sbjct: 207 KCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQ---VFEDMKK 263
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
R D Y+ +I MG+ G+ A+ LF+EM G + YN L + K
Sbjct: 264 -RHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTL----MQVLAKG 318
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
K + KA+ F +M C+PN TY++LL + +++ + E+ + + IY+
Sbjct: 319 KMVDKAIQVFSRMVETG-CRPNEYTYSLLLNLLVAEGQLVRLDGVV-EISKRYMTQGIYS 376
Query: 258 Y--------------------------NGVMDAY--------GKNGMIKEMESVLSRMKS 283
Y G D+Y G I+ +E +LS++
Sbjct: 377 YLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIE-MLSKIHE 435
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
D + +N + + GK + + +F+ + P + T+N +I ++G+ +
Sbjct: 436 KGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDE 495
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A +F+++ P I+Y +I G +V A F E+ + G + V T + ++E
Sbjct: 496 AINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLME 555
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
+ A LFE G P+ TY +L K L +M+Q G+ P
Sbjct: 556 CFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTP 615
Query: 464 NKRFF--LEALETFS 476
+ + LE L++ S
Sbjct: 616 DSITYTVLERLQSVS 630
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 165/397 (41%), Gaps = 40/397 (10%)
Query: 81 ELVRVLMRS--FSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQ 138
++++++MR D + + + ++ E FLLF+E+ K
Sbjct: 441 QIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEM-----------------KS 483
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
I D Y+ LI K G A F EM + GC P Y AL+ A+L K K
Sbjct: 484 VGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYL----KTK 539
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL------------ 246
+ +A F +M C PN +TY+ L+ +A + ++ ++
Sbjct: 540 QVPQASDIFHRMVD-AGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFY 598
Query: 247 ----HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
H +AP++ TY ++D K + + + +L M SN C+P+ I ++ LID + K
Sbjct: 599 FEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCK 658
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
D ++VF + PT+ T+ S+I K R A V +M TP+ +T
Sbjct: 659 VGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVT 718
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y +I +A ++ + K G + V T ++++ +G + LF
Sbjct: 719 YTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMI 778
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
G P+ TY++L A + + LL M+Q
Sbjct: 779 TQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQT 815
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 133/338 (39%), Gaps = 40/338 (11%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
I + Y L+A KK Q + S M N GC P+PS++N+L+ ++ + RD A
Sbjct: 306 IPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYK 365
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+M G C P V YNI + + E + +PD
Sbjct: 366 ----LLNRMAGC-GCPPGYVVYNIFIGSICSG--------------EELPSPD------- 399
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQC---KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
++ E V M ++ C K + F + GK FDK Q+ K +M
Sbjct: 400 --------LLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGK---FDKAFQIIKLMMR 448
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
P T++ +I +A KA +FQ+M ++ P TY +I + + +
Sbjct: 449 KGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQ 508
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
AR FDE+ +G V T A+L AY +A +F + G P++ TY L
Sbjct: 509 ARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVD 568
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
KA + ++ +M F+ E T S
Sbjct: 569 GLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDS 606
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 141/328 (42%), Gaps = 16/328 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + K + A L M ++GC P+ +Y+ALI K L A F
Sbjct: 614 YGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFC----KVGKLDNAQEVF 669
Query: 208 QKMKGMERCK--PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M +C P + TY L+ A + R +D + ++ ES P++ TY ++D
Sbjct: 670 FRMS---KCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGL 726
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ G ++ +LS M+ C P+++T+ LID GK D Q+F ++ P
Sbjct: 727 CRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNY 786
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+ +I + A L +A + +M Y P ++ C + G+ + + +E
Sbjct: 787 VTYRVLINHCCAAGLLDEAHSLLSEMK-QTYWPKYVQGYCSVVQ-GFSKKFIASLGLLEE 844
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNG-LPTEADL---LFENSHNMGVTPDSSTYKLLYKAYT 441
L G +++++ G L +L + E S ++ +T TY L +A
Sbjct: 845 LESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNIT-SKDTYTSLIQALC 903
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFL 469
A+ E +L + + G+VP F+
Sbjct: 904 LASQLEKAFELYSEITRKGVVPELSAFI 931
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 154/391 (39%), Gaps = 53/391 (13%)
Query: 128 CLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
C+ F W ++Q Y Y+ L V+ + R L E+ D V L+
Sbjct: 120 CVRFFLWAERQVGYSHTGACYNALAEVLHFDDRARTTERLLREIGED----DREVLGRLL 175
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
+ + A AKAL ++K +P+ TYN L++ A A +D + KE+
Sbjct: 176 NVIVRKCCRHGAWAKALEELGRLKDFGY-RPSGATYNALVQVLATAGQMDMGFRVQKEMS 234
Query: 248 ESILAPDIYTYNGVMDAYGKNG--------------------------------MIKEME 275
E D +T A K G + E
Sbjct: 235 ELGFCTDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAI 294
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
S L RM+ N C P+++T+ L+ + K++ +++ +M+ P FNS++ +Y
Sbjct: 295 SFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSY 354
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--------DNVSRAREIFDELS 387
AR A + +M P ++ Y I + C D ++ A ++++E+
Sbjct: 355 CNARDYPYAYKLLNRMAGCGCPPGYVVYN--IFIGSICSGEELPSPDLLALAEKVYEEM- 411
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM---GVTPDSSTYKLLYKAYTKAN 444
L ++ +N A C+ G+ + D F+ M G PD+STY + +A
Sbjct: 412 -LASSCVLNKVNTANFARCLCGM-GKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAM 469
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
E L + M+ G++P+ + +++F
Sbjct: 470 KVEKAFLLFQEMKSVGVIPDVYTYTILIDSF 500
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 162/343 (47%), Gaps = 13/343 (3%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR-- 194
++R +T Y+ LIA + + G A +M + G PD Y ALI +R
Sbjct: 271 RERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRS 330
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
++AKAL +M E KPN+V Y L+ + N D+ + KE+ + + P+
Sbjct: 331 NEAKAL------LDEMSCAE-LKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPN 383
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
TY+ ++ K G + +L +M + +PD IT+NL+I+ + + + ++
Sbjct: 384 KITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLS 443
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC- 373
+ ++ P + T++ MI ++ KA + ++MT P+ Y +I+ GYC
Sbjct: 444 EMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLIS--GYCR 501
Query: 374 -DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
NVS A EIFD+++K+ + N+++ G E+ F G+ P+ T
Sbjct: 502 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT 561
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
Y L Y K E ++L++RM G+ PN +++ LE++
Sbjct: 562 YSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY 604
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 151/336 (44%), Gaps = 16/336 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS +I + + G+ A L EM G +P+ VY LI+ + R+ +LA + F
Sbjct: 457 YSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGY--CREGNVSLACEI--F 512
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
KM + P++ YN L+ ++ V++ F ++ E L P+ +TY+G++ Y K
Sbjct: 513 DKMTKV-NVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLK 571
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
NG ++ E ++ RM KP+ + + L++SY K +K+ FKS++
Sbjct: 572 NGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRI 631
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECIITMYGYCDNVSRARE--I 382
+ +I N + G E F+ ++ ++ P Y +I+ G C R + I
Sbjct: 632 YGILIHNLSSS---GNMEAAFRVLSGIEKNGSVPDVHVYSSLIS--GLCKTADREKAFGI 686
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
DE+SK G D + NA+++ C +G + A +F + G+ P+ TY L K
Sbjct: 687 LDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCK 746
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
L M GI P+ F L T SS
Sbjct: 747 VGDISNAFYLYNEMLATGITPDA-FVYSVLTTGCSS 781
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 140/304 (46%), Gaps = 12/304 (3%)
Query: 165 MWLFSE-MRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALGYFQKMKGMER-CKPNI 220
+W E M +G PD Y+ LI A+ R D AK + +M+ ER C N
Sbjct: 228 LWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKV------LVEMR--ERGCGLNT 279
Query: 221 VTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSR 280
VTYN+L+ ++ V++ K++ + L PD +TY +++ K+ E +++L
Sbjct: 280 VTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDE 339
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
M + KP+++ + LID + + D+ ++ K ++ + +P T+++++ K
Sbjct: 340 MSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQ 399
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
+A + ++M + P ITY II + + A + E+ G V T +
Sbjct: 400 MDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSI 459
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
M+ C +G P +A L E G+ P++ Y L Y + L ++ +M +
Sbjct: 460 MIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVN 519
Query: 461 IVPN 464
++P+
Sbjct: 520 VLPD 523
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 160/389 (41%), Gaps = 39/389 (10%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L E KSD + F+ M Q + D IY LI + G A + S + +
Sbjct: 600 LLESYFKSDDIEKVSSTFKSMLDQ-GVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKN 658
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQ 232
G PD VY++LI+ T D+ KA G +M KG++ PNIV YN L+ +
Sbjct: 659 GSVPDVHVYSSLISGLCKTADR----EKAFGILDEMSKKGVD---PNIVCYNALIDGLCK 711
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+ ++ +F + L P+ TY ++D K G I + + M + PD
Sbjct: 712 SGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFV 771
Query: 293 FNLLIDSYGKRQAFDKMEQVF-KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
+++L + G A D + +F M + ++ +FN+++ + K + + +
Sbjct: 772 YSVL--TTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVI 829
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL------------SKLGKDM------ 393
P+ +T E II+ +S IF EL S L DM
Sbjct: 830 MGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKI 889
Query: 394 KVSTLNAMLEAYCMNGLPTEA----DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
+ ++ M+ +C G +A D++ S MG SS ++ K + E +
Sbjct: 890 PLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGC---SSYLAIVDNLCRKGKLSEAL 946
Query: 450 QKLLKRMEQNGIVPNKRFFLEALETFSSS 478
LLK M++ GI P++ L L +S
Sbjct: 947 N-LLKEMDKRGICPSENQCLILLTNLHTS 974
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 72/184 (39%)
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
++L+D+Y K +V + P++ N+++ + +A V + M
Sbjct: 176 VLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFM 235
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+P TY +I Y A+++ E+ + G + T N ++ C +G
Sbjct: 236 VGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAV 295
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
EA ++ + G+ PD TY L K+ + LL M + PN +
Sbjct: 296 EEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANL 355
Query: 472 LETF 475
++ F
Sbjct: 356 IDGF 359
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 117/310 (37%), Gaps = 80/310 (25%)
Query: 261 VMDAYGKNGMIKEMESVLSRMK------SNQC---------------------------- 286
++D Y K+G +++ V+ M+ S +C
Sbjct: 180 LVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 239
Query: 287 -KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII------------ 333
PD+ T++ LI++Y K + FD ++V + T+N +I
Sbjct: 240 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 299
Query: 334 -------NYG----------------KARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+YG K+R +A+ + +M+ + P+ + Y +I +
Sbjct: 300 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 359
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
N A ++ E+ G T + ++ C G A LL + PD+
Sbjct: 360 MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT 419
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG-SQSGSAK- 488
TY L+ + + + + K+ +LL ME GI PN + T+S + G QSG +
Sbjct: 420 ITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPN-------VYTYSIMIHGLCQSGEPEK 472
Query: 489 -TDLTRSLST 497
+DL ++T
Sbjct: 473 ASDLLEEMTT 482
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 161/344 (46%), Gaps = 22/344 (6%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + + G+T+ A+ L + RP+ +Y+ +I + K K + A +
Sbjct: 166 YGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMC----KDKLVNDAFDLY 221
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M +R P++VTY+ L+ + LF + + P++YT++ ++D + K
Sbjct: 222 CEMVS-KRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCK 280
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G ++E ++VL+ M K D++T+N L+D Y + +K + +F + P + +
Sbjct: 281 EGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWS 340
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDE 385
++ MI + K ++ +A +F++M + P+ +TY ++ G C + S A E+ DE
Sbjct: 341 YSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVD--GLCKSGRTSCALELVDE 398
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ G+ + T N++L+A C N +A +L G+ PD TY +L K
Sbjct: 399 MHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGR 458
Query: 446 KELVQKLLKRMEQNGIVP-------------NKRFFLEALETFS 476
+ QK+ + + G P NK FF E L S
Sbjct: 459 LDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLS 502
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 147/324 (45%), Gaps = 15/324 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS LI+ G+ + A+ LF+ M + P+ ++ LI K +
Sbjct: 232 DVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCK-EGKVREAKNV 290
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L K + K ++VTYN L+ + V++ +LF + + + PD+++Y+ +++
Sbjct: 291 LAVMMK----KNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMIN 346
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ----AFDKMEQVFKSLMHS 319
+ K M+ E + M Q P+++T+N L+D K A + +++ MH
Sbjct: 347 GFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDE-----MHD 401
Query: 320 KEKPT-LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
+ +P+ + T+NS++ K KA + K+ P TY +I +
Sbjct: 402 RGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDD 461
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A+++F++L G + T +++ +C G E + + G P++ TY++L
Sbjct: 462 AQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIH 521
Query: 439 AYTKANMKELVQKLLKRMEQNGIV 462
+ + + + +KLL+ M G++
Sbjct: 522 SLFEKDENDKAEKLLREMIARGLL 545
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 144/319 (45%), Gaps = 7/319 (2%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+YS +I M K A L+ EM + PD Y++LI+ L A+
Sbjct: 200 MYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFC----VVGKLKYAVDL 255
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F +M + PN+ T++IL+ + V + + + + + D+ TYN +MD Y
Sbjct: 256 FNRMIS-DNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYC 314
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK-PTL 325
+ + +S+ + M PD+ +++++I+ + K + D+ ++F+ MH K+ P +
Sbjct: 315 LVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEE-MHCKQIFPNV 373
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+NS++ K+ A + +M + ITY I+ ++V +A + +
Sbjct: 374 VTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTK 433
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ + G + T ++ C G +A +FE+ G +P+ TY L +
Sbjct: 434 IKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGF 493
Query: 446 KELVQKLLKRMEQNGIVPN 464
+ +L +M+ NG +PN
Sbjct: 494 FDEGLAMLSKMKDNGCIPN 512
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 123/280 (43%), Gaps = 12/280 (4%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + K K + V M K+ + D Y+ L+ Q A LF+ M
Sbjct: 273 ILIDGFCKEGKVREAKNVLAVMMKKNVKL-DVVTYNSLMDGYCLVKQVNKAKSLFNVMAQ 331
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCK---PNIVTYNILLRAC 230
G PD Y+ +I K K + +A+ F++M CK PN+VTYN L+
Sbjct: 332 RGVTPDVWSYSIMINGFC----KIKMVDEAMKLFEEM----HCKQIFPNVVTYNSLVDGL 383
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
++ L E+H+ +I TYN ++DA KN + + +L+++K +PDI
Sbjct: 384 CKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDI 443
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
T+ +LI+ K D ++VF+ L+ P + T+ S+I + + + K
Sbjct: 444 FTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSK 503
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
M P+ ITYE +I D +A ++ E+ G
Sbjct: 504 MKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARG 543
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/318 (19%), Positives = 123/318 (38%), Gaps = 72/318 (22%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P + + +L + +A+ +L +++ + + PD T N +M+ + + G IK SV
Sbjct: 56 PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKR---------------QAFDKMEQV-----FKSLM 317
+++ PD +TF +LI + Q F +++QV L
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGF-QLDQVSYGTLINGLC 174
Query: 318 HSKE----------------KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
E +P + ++++I + K +L A ++ +M + + +P +
Sbjct: 175 RVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVV 234
Query: 362 TYECIITMY---------------------------------GYC--DNVSRAREIFDEL 386
TY +I+ + G+C V A+ + +
Sbjct: 235 TYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVM 294
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
K + V T N++++ YC+ +A LF GVTPD +Y ++ + K M
Sbjct: 295 MKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMV 354
Query: 447 ELVQKLLKRMEQNGIVPN 464
+ KL + M I PN
Sbjct: 355 DEAMKLFEEMHCKQIFPN 372
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 95/233 (40%), Gaps = 6/233 (2%)
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
LH++ P + ++ + K + S+ +M+ N KPD IT NLL++ + +
Sbjct: 49 LHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGH 108
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
VF ++ P TF +I KA Y K+ A + ++Y
Sbjct: 109 IKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGT 168
Query: 366 IITMYGYCDNVSRAREIFDELSKL-GKDMK--VSTLNAMLEAYCMNGLPTEADLLFENSH 422
+I G C V + L ++ GK ++ V + ++++ C + L +A L+
Sbjct: 169 LIN--GLC-RVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMV 225
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ ++PD TY L + + L RM + I PN F ++ F
Sbjct: 226 SKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGF 278
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 144/313 (46%), Gaps = 6/313 (1%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ LF EM +SG PD YN LI H H +A L +AL F +MK KP+I TY
Sbjct: 386 AVCLFEEMADSGL-PDVFTYNNLI--HWHC--QAHKLREALNLFDRMK-KAGVKPSINTY 439
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
N LL + +D+ L+ E+ P++ TY +M Y ++L MK
Sbjct: 440 NSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQ 499
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
N + T+N+LI+ +++ + KS M PT+ T+NS+I + KA + G
Sbjct: 500 NGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGS 559
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A V+Q+M P+ ITY I Y A ++ +++ + G + NA++
Sbjct: 560 AFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALIN 619
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
+C G + A L G+ P++ Y L Y NM + V K + M + GIV
Sbjct: 620 GFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVA 679
Query: 464 NKRFFLEALETFS 476
+ + ++ FS
Sbjct: 680 DTSTYTTLIDGFS 692
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 162/377 (42%), Gaps = 13/377 (3%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
L+ + L +W + +F M + D Y+ LI + + R A+ LF M+
Sbjct: 372 LVLKGLLNDRRWKDAVCLFEEMADSG--LPDVFTYNNLIHWHCQAHKLREALNLFDRMKK 429
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
+G +P + YN+L+ + K + +A+ + +M ME KPN+VTY L+R
Sbjct: 430 AGVKPSINTYNSLLMGYC----KKGCMDEAVKLYSEMP-MEGFKPNVVTYITLMRGYIAK 484
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
++ D AL E+ ++ ++ + YTYN +++ + E++ +L S P ++T+
Sbjct: 485 KDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTY 544
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N +I+ + K V++ + P + T+ S I Y + A + +
Sbjct: 545 NSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRR 604
Query: 354 MKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P + Y +I G+C N+S A ++ L K G N+++ Y +
Sbjct: 605 RGLQPDIVAYNALIN--GFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMM 662
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
E +E+ G+ D+STY L ++K +L M G +P+ F A
Sbjct: 663 KEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDA-FTFTA 721
Query: 472 LETFSSSLAGSQSGSAK 488
L T +G G+ K
Sbjct: 722 L-THGLCRSGDIDGAKK 737
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 121/301 (40%), Gaps = 5/301 (1%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A L EM+ +G + YN LI + D+ + L F E P ++TY
Sbjct: 490 AYALLDEMKQNGVSCNDYTYNVLING-ICMVDRVCEVDGMLKSFMS----EGFIPTMMTY 544
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
N ++ +A + +++++ E L P+I TY +D Y + G +L+ ++
Sbjct: 545 NSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRR 604
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+PDI+ +N LI+ + + Q+ L+ P +NS+I Y + +
Sbjct: 605 RGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKE 664
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
++ M TY +I + NV+ A E++ E+ G T A+
Sbjct: 665 VSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTH 724
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
C +G A L E + V P+ Y +L Y + + +L M GI P
Sbjct: 725 GLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQP 784
Query: 464 N 464
+
Sbjct: 785 D 785
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 137/360 (38%), Gaps = 39/360 (10%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
R + D + L+ + + A+ LF EMR G R D +++AL++A L K
Sbjct: 151 RGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACL----KEG 206
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
A+ F +M G E P+ Y + + A + + + + +E+ E +TY
Sbjct: 207 MHEDAVRLFDEMPGAE-IDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTY 265
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
++D K G ++E V M+ K D+I L+ Y RQ +FK +
Sbjct: 266 RTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLK 325
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS------------------- 359
PT + +I + + KA + ++MT PS
Sbjct: 326 DGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKD 385
Query: 360 ---------------FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
TY +I + + A +FD + K G ++T N++L
Sbjct: 386 AVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMG 445
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
YC G EA L+ G P+ TY L + Y + LL M+QNG+ N
Sbjct: 446 YCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCN 505
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 117/266 (43%), Gaps = 13/266 (4%)
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQ 232
G P YN++I + KA + A +Q+M KG+ PNI+TY + +
Sbjct: 536 GFIPTMMTYNSIINGFV----KAGMMGSAFTVYQQMREKGL---PPNIITYTSFIDGYCR 588
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
D + ++ L PDI YN +++ + + G + +L + + P+ +
Sbjct: 589 TGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVV 648
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N LI Y ++ + ++S++ T+ ++I + K A ++ +M
Sbjct: 649 YNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMM 708
Query: 353 AMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
A Y P T+ + +G C ++ A+++ +E+ +L V N ++ Y +
Sbjct: 709 AKGYIPDAFTFTALT--HGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCK 766
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLL 436
EA L + NMG+ PD +TY +L
Sbjct: 767 LQEAFRLHDEMLNMGIQPDDTTYDIL 792
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 98/222 (44%), Gaps = 7/222 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ I + G + +A+ + +++R G +PD YNALI + + AL +
Sbjct: 579 YTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILL 638
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ + PN V YN L+ + +V+ ++ + + + D TY ++D + K
Sbjct: 639 K-----DGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSK 693
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+G + + S M + PD TF L + D +++ + + +P +
Sbjct: 694 DGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFI 753
Query: 328 FNSMIINYGK-ARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+N +I Y + +LQ +A + +M M P TY+ +++
Sbjct: 754 YNMLINGYLRDCKLQ-EAFRLHDEMLNMGIQPDDTTYDILVS 794
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ADT Y+ LI K G A+ L+SEM G PD + AL H ++ +
Sbjct: 678 VADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALT----HGLCRSGDID 733
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
A ++M+ ++ +PN+ YN+L+ + + + L E+ + PD TY+
Sbjct: 734 GAKKLLEEMRRLD-VRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYD 790
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 142/324 (43%), Gaps = 9/324 (2%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
IY+ LI K G LA LF +M G P+P Y+ L+ + +
Sbjct: 195 IYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREG------- 247
Query: 207 FQKMKGMERCK--PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
FQ + M+R PN YN L+ VD+ +F E+ E +A + TYN ++
Sbjct: 248 FQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGG 307
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ E ++ ++ P+I+T+N+LI+ + D ++F L S PT
Sbjct: 308 LCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPT 367
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
L T+N++I Y K A + ++M PS +TY +I + + +A E+
Sbjct: 368 LVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHS 427
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ K G V T + ++ C++G EA LF++ M + P+S Y + Y K
Sbjct: 428 LMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEG 487
Query: 445 MKELVQKLLKRMEQNGIVPNKRFF 468
+LL M +G+VPN F
Sbjct: 488 SSYRALRLLNEMVHSGMVPNVASF 511
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 140/310 (45%), Gaps = 24/310 (7%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQK----MKGMER--CK 217
A W+F+E++ S D + +I K +A GYF K + +E
Sbjct: 143 AWWIFNELK-SKVVLDAYSFGIMI----------KGCCEA-GYFVKGFRLLAMLEEFGLS 190
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
PN+V Y L+ C + NV LF ++ L P+ +TY+ +M+ + K G+ +E +
Sbjct: 191 PNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQM 250
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
MK + P+ +N LI Y DK +VF + + T+N +I +
Sbjct: 251 YENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCR 310
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKV 395
+ G+A + K+ + +P+ +TY +I G+CD + A +F++L G +
Sbjct: 311 GKKFGEAVKLVHKVNKVGLSPNIVTYNILIN--GFCDVGKMDTAVRLFNQLKSSGLSPTL 368
Query: 396 STLNAMLEAYC-MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
T N ++ Y + L DL+ E + P TY +L A+ + N E ++
Sbjct: 369 VTYNTLIAGYSKVENLAGALDLVKEMEERC-IAPSKVTYTILIDAFARLNYTEKACEMHS 427
Query: 455 RMEQNGIVPN 464
ME++G+VP+
Sbjct: 428 LMEKSGLVPD 437
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 135/305 (44%), Gaps = 9/305 (2%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + + Y+ LI+ G A +F+EMR G YN LI +
Sbjct: 255 KRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGG----LCR 310
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
K +A+ K+ + PNIVTYNIL+ +D LF +L S L+P +
Sbjct: 311 GKKFGEAVKLVHKVNKVGL-SPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLV 369
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TYN ++ Y K + ++ M+ P +T+ +LID++ + +K ++ +
Sbjct: 370 TYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLM 429
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
S P + T++ +I +A +F+ + M P+ + Y +I +GYC
Sbjct: 430 EKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMI--HGYCKEG 487
Query: 377 S--RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
S RA + +E+ G V++ + + C + EA+LL N G+ P S YK
Sbjct: 488 SSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYK 547
Query: 435 LLYKA 439
+++K
Sbjct: 548 MVHKV 552
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 144/334 (43%), Gaps = 10/334 (2%)
Query: 145 TGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKAL 204
T +Y ++ T A+ M + G P + +N L+ + ++ KA
Sbjct: 89 TPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLI----RSNYFDKAW 144
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
F ++K + + ++ I+++ C +A + L L E L+P++ Y ++D
Sbjct: 145 WIFNELK--SKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDG 202
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
K G + +++ +M P+ T+++L++ + K+ + Q+++++ S P
Sbjct: 203 CCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPN 262
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREI 382
+N +I Y + KA VF +M +TY +I G C A ++
Sbjct: 263 AYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIG--GLCRGKKFGEAVKL 320
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+++K+G + T N ++ +C G A LF + G++P TY L Y+K
Sbjct: 321 VHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSK 380
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
L+K ME+ I P+K + ++ F+
Sbjct: 381 VENLAGALDLVKEMEERCIAPSKVTYTILIDAFA 414
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 153/316 (48%), Gaps = 11/316 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + K G+T+ A+ L + +PD +YN +I + K K + +A +
Sbjct: 177 YGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLC----KNKLVGEACNLY 232
Query: 208 QKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+M ++ PN+VTY L+ C ++ V AL E+ + PD+YT++ ++DA G
Sbjct: 233 SEMNA-KQIYPNVVTYTTLIYGFCIMGCLIEAV-ALLNEMKLKNINPDVYTFSILIDALG 290
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K G +K + VL+ M KPD++T+N L+D Y + VF S+ S P +
Sbjct: 291 KEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQ 350
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFD 384
++ MI K ++ +A +F++M P+ IT+ +I G C + ++ ++ D
Sbjct: 351 SYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLID--GLCKSGRIAYVWDLVD 408
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
++ + V T +++++A C N +A LF+ + PD TY +L K
Sbjct: 409 KMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGG 468
Query: 445 MKELVQKLLKRMEQNG 460
++ Q++ + + G
Sbjct: 469 RLKIAQEVFQHLLIKG 484
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 142/331 (42%), Gaps = 13/331 (3%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+R Y D + LI + +G+ + A+ ++ + D Y LI +
Sbjct: 132 KRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETK 191
Query: 198 KALAKALGYFQKMKGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
A+ Q M+ +E KP++V YNI++ + + + V + L+ E++ + P++
Sbjct: 192 AAI-------QLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNV 244
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
TY ++ + G + E ++L+ MK PD+ TF++LID+ GK + V
Sbjct: 245 VTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAV 304
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
+M + KP + T+NS++ Y A+YVF M TP +Y +I G C
Sbjct: 305 MMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMID--GLCKT 362
Query: 376 --VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
V A +F+E+ T N++++ C +G L + + D TY
Sbjct: 363 KMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITY 422
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L A K + L K+M I P+
Sbjct: 423 SSLIDALCKNCHLDQAIALFKKMITQEIQPD 453
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 134/319 (42%), Gaps = 40/319 (12%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +S LI +GK+G+ + A + + M + +PD YN+L+ + + K
Sbjct: 278 DVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNE-----VKH 332
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
Y P + +Y I++ + + VD+ +LF+E+ + P+ T+N ++D
Sbjct: 333 AKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLID 392
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K+G I + ++ +M+ D+IT++ LID+ K D+ +FK ++ + +P
Sbjct: 393 GLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQP 452
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T+ +I K A+ VFQ + Y
Sbjct: 453 DMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGY--------------------------- 485
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ + T M+ +C GL EA L + G P++ T+ ++ A +
Sbjct: 486 --------HLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEK 537
Query: 444 NMKELVQKLLKRMEQNGIV 462
+ + +KLL+ M G++
Sbjct: 538 DENDKAEKLLREMIARGLL 556
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 120/318 (37%), Gaps = 40/318 (12%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
LI GQ L+ + + + G PD LI L R + K KAL + +
Sbjct: 110 LINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKG-LCLRGEVK---KALKFHDDV 165
Query: 211 KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
+E + + ++Y L+ + L + L E + PD+ YN ++D+ KN +
Sbjct: 166 VALEF-QLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKL 224
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
+ E ++ S M + Q P+++T+ LI + + + + P + TF+
Sbjct: 225 VGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSI 284
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
+I GK A+ V M P +TY ++ Y + V A+ +F+ +++
Sbjct: 285 LIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQ-- 342
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
GVTP +Y ++ K M +
Sbjct: 343 ---------------------------------SGVTPGVQSYTIMIDGLCKTKMVDEAI 369
Query: 451 KLLKRMEQNGIVPNKRFF 468
L + M+ ++PN F
Sbjct: 370 SLFEEMKHKNVIPNTITF 387
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 101/204 (49%), Gaps = 6/204 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ + L K+ + + +F M K + I +T ++ LI + K G+ L +MR+
Sbjct: 354 IMIDGLCKTKMVDEAISLFEEM-KHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRD 412
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
D Y++LI A K L +A+ F+KM E +P++ TY IL+ +
Sbjct: 413 RSQLADVITYSSLIDALC----KNCHLDQAIALFKKMITQE-IQPDMYTYTILIDGLCKG 467
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ +F+ L DI TY ++ + K G+ E ++LS+M+ N C P+ ITF
Sbjct: 468 GRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITF 527
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLM 317
+++I + ++ DK E++ + ++
Sbjct: 528 DIIICALFEKDENDKAEKLLREMI 551
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 162/347 (46%), Gaps = 10/347 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
LF +L L E R+M + D Y++LI +GK G+ A + EM+
Sbjct: 274 LFFKLDNVHGALSLFEEMRYM----YCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQRE 329
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
C+PD V N +I + KA L L F++M G+ C PN+VTYN +++A +++
Sbjct: 330 DCKPDTVVMNNMI----NFLGKAGRLDDGLKLFEEM-GVSHCIPNVVTYNTIIKALFESK 384
Query: 235 N-VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ V +V + F+ + S ++P +TY+ ++D + K I++ +L M P +
Sbjct: 385 SRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAY 444
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
LID+ GK + +D ++F+ L + + + MI + GKA A +F +M+
Sbjct: 445 CSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSK 504
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
+ TP+ Y +++ + A ++ + G +++ N +L G P
Sbjct: 505 LGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHR 564
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
A + N N + PD+ +Y + A + A M E +L+K M G
Sbjct: 565 AMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALG 611
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 157/364 (43%), Gaps = 10/364 (2%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
F +LG+ D ++ L K+ IY+ +I++ K A+ LF EMR
Sbjct: 240 FCKLGRQDSAIRLLNEM----KENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMY 295
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
CRPD Y LI KA + +A ++ +M+ E CKP+ V N ++ +A
Sbjct: 296 CRPDVFTYTELIRG----LGKAGRIDEAYHFYHEMQ-REDCKPDTVVMNNMINFLGKAGR 350
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDA-YGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+D LF+E+ S P++ TYN ++ A + + E+ S RMK + P T++
Sbjct: 351 LDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYS 410
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+LID + K +K + + + P + S+I GKA+ A +FQ++
Sbjct: 411 ILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKEN 470
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ S Y +I G + A +FDE+SKLG V NA++ + EA
Sbjct: 471 CGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEA 530
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
G PD ++Y ++ K ++L M+ + I P+ + L
Sbjct: 531 LTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSA 590
Query: 475 FSSS 478
S +
Sbjct: 591 LSHA 594
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 159/396 (40%), Gaps = 48/396 (12%)
Query: 104 VKVVRSEHCFLLFEELGKSDKWLQC-LEVFRWMQKQRWYIADTGIY-------------- 148
V ++R +H L E+ K+D + ++ FRW K+R Y DT Y
Sbjct: 83 VLMLRVDH--WLVREVMKTDVGVNVKMQFFRWAAKKRNYQHDTSTYMALIHCLELVEQYG 140
Query: 149 ----------------------SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
S++I ++G A+ +F +++ C+P YN++
Sbjct: 141 EMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSM 200
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I +H K + +M C P+ VTY+ L+ A + D L E+
Sbjct: 201 IIMLIHEGQYEKVHE----LYNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEM 256
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
E+ + P Y ++ + K + S+ M+ C+PD+ T+ LI GK
Sbjct: 257 KENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRI 316
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
D+ + + KP N+MI GKA +F++M P+ +TY I
Sbjct: 317 DEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTI 376
Query: 367 ITMYGYCDNVSRAREIFDELSKL-GKDMKVS--TLNAMLEAYCMNGLPTEADLLFENSHN 423
I ++ SR E+F ++ G + S T + +++ +C +A +L E
Sbjct: 377 IK--ALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDE 434
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
G P + Y L A KA +L +L + +++N
Sbjct: 435 KGFPPCPAAYCSLIDALGKAKRYDLACELFQELKEN 470
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 119/252 (47%), Gaps = 17/252 (6%)
Query: 130 EVFRWMQKQRWYIADTGI------YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
EVF W ++ + +GI YS LI K + AM L EM G P P+ Y
Sbjct: 389 EVFSWFERMK----GSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAY 444
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV-TYNILLRACAQARNVDQVNAL 242
+LI A KAK A FQ++K E C + Y ++++ +A +D L
Sbjct: 445 CSLIDA----LGKAKRYDLACELFQELK--ENCGSSSARVYAVMIKHLGKAGRLDDAINL 498
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
F E+ + P++Y YN +M + M+ E + + +M+ + C PDI ++N++++ K
Sbjct: 499 FDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAK 558
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ ++ ++ +S KP ++N+++ A + +A + ++M A+ + IT
Sbjct: 559 TGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLIT 618
Query: 363 YECIITMYGYCD 374
Y I+ G D
Sbjct: 619 YSSILEAIGKVD 630
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 136/330 (41%), Gaps = 5/330 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L LGK+ + + + MQ++ DT + + +I +GK G+ + LF EM S
Sbjct: 306 LIRGLGKAGRIDEAYHFYHEMQREDCK-PDTVVMNNMINFLGKAGRLDDGLKLFEEMGVS 364
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
C P+ YN +I A ++ + +++ +F++MKG P+ TY+IL+ +
Sbjct: 365 HCIPNVVTYNTIIKALFESKSR---VSEVFSWFERMKG-SGISPSPFTYSILIDGFCKTN 420
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+++ L +E+ E P Y ++DA GK + +K N +
Sbjct: 421 RIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYA 480
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++I GK D +F + P + +N+++ +A + +A +KM
Sbjct: 481 VMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEH 540
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P +Y I+ RA E+ + + N +L A G+ EA
Sbjct: 541 GCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEA 600
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
L + + +G D TY + +A K +
Sbjct: 601 AELMKEMNALGFEYDLITYSSILEAIGKVD 630
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/234 (19%), Positives = 96/234 (41%), Gaps = 5/234 (2%)
Query: 236 VDQVNALFKELHESILAPDIYT----YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
V+Q ++K + E + +P + V+ G MI + ++ ++K+ +C+P
Sbjct: 136 VEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQ 195
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-KPTLPTFNSMIINYGKARLQGKAEYVFQK 350
+N +I ++K+ +++ + + P T++++I + K Q A + +
Sbjct: 196 AYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNE 255
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M P+ Y II+++ DNV A +F+E+ + V T ++ G
Sbjct: 256 MKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGR 315
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA + PD+ + KA + KL + M + +PN
Sbjct: 316 IDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPN 369
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 75/188 (39%), Gaps = 35/188 (18%)
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN-YGKARLQGKAEYV 347
D T+ LI + + +M ++ + ++ S P S +I G A++ GKA +
Sbjct: 122 DTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMIGKAITI 181
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F ++ A K P+ Y +I M + + E+++E+S E +C
Sbjct: 182 FYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSN--------------EGHC- 226
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
PD+ TY L A+ K ++ +LL M++NG+ P +
Sbjct: 227 -------------------HPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKI 267
Query: 468 FLEALETF 475
+ + F
Sbjct: 268 YTMIISLF 275
>gi|147812173|emb|CAN61517.1| hypothetical protein VITISV_033966 [Vitis vinifera]
Length = 635
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 142/325 (43%), Gaps = 4/325 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D+ ++ +I + G + AM F +M+ SG +P S +N LI + A ++
Sbjct: 141 DSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGY----GIAGEPEES 196
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
Z M E +PN+ TYN+L+RA N+ + + ++ S L PD TYN +
Sbjct: 197 QKLLZLMSQDENVRPNLRTYNVLVRAWCNKXNIMKAWNVVYKMVASGLQPDAVTYNTIAT 256
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
AY +NG + E ++ M+++ +P+ T ++I Y K + Q + +P
Sbjct: 257 AYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQP 316
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
L FNS+I + A + V M P IT+ I+ + + + REIF
Sbjct: 317 NLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIF 376
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
D++ K + + + Y G P +A+ + G P+ + + + A
Sbjct: 377 DDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVMFTTIINGWCSA 436
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFF 468
E K+ ++M + GI PN + F
Sbjct: 437 GRMEYAIKIFEKMCECGIAPNLKTF 461
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 125/264 (47%), Gaps = 3/264 (1%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
KP++VTY LL A ++ D ++++ ++ E+ + PD +N V++A+ ++G ++E
Sbjct: 104 KPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMK 163
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE--KPTLPTFNSMIIN 334
+MK + KP TFN LI YG ++ +++ + LM E +P L T+N ++
Sbjct: 164 YFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLZ-LMSQDENVRPNLRTYNVLVRA 222
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
+ KA V KM A P +TY I T Y S+A I E+
Sbjct: 223 WCNKXNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPN 282
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
T ++ YC G EA ++G+ P+ + L K + A ++ V ++L
Sbjct: 283 ERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLT 342
Query: 455 RMEQNGIVPNKRFFLEALETFSSS 478
ME+ G+ P+ F + +S++
Sbjct: 343 LMEEFGVKPDVITFSTIMNAWSAA 366
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 134/290 (46%), Gaps = 11/290 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ + + G+ A + EM+NS +P+ +I + K + +A
Sbjct: 247 DAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYC----KEGKIKEA 302
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L + +MK + +PN+V +N L++ A + D VN + + E + PD+ T++ +M+
Sbjct: 303 LQFVYRMKDL-GLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMN 361
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
A+ G + + + M + +PD +++L Y + +K E++ +++ S P
Sbjct: 362 AWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHP 421
Query: 324 TLPTFNSMIINYGKARLQGKAEY---VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+ F ++I + A G+ EY +F+KM P+ T+E +I YG ++
Sbjct: 422 NVVMFTTIINGWCSA---GRMEYAIKIFEKMCECGIAPNLKTFETLIWGYGEARQPWKSE 478
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
E+ + + + +TL + EA+ GL EA+ + N T ++
Sbjct: 479 EVLQIMEEFNVQPEKTTLLLVAEAWRATGLKKEANRILSAVKNEETTHET 528
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 112/240 (46%), Gaps = 3/240 (1%)
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+V ++ + E P + TY ++ A + S++S+++ N +PD I FN +I
Sbjct: 90 EVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVI 149
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+++ + + + F + S KPT TFN++I YG A +++ + Z M+ +
Sbjct: 150 NAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLZLMSQDENV 209
Query: 358 -PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
P+ TY ++ + N+ +A + ++ G T N + AY NG ++A+
Sbjct: 210 RPNLRTYNVLVRAWCNKXNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEG 269
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTK-ANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ N V P+ T ++ Y K +KE +Q + RM+ G+ PN F ++ F
Sbjct: 270 IILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQ-FVYRMKDLGLQPNLVVFNSLIKGF 328
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 151/354 (42%), Gaps = 44/354 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y ++ VM K GQT LAM L +M + D Y+ +I K +L A F
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC----KDGSLDNAFNLF 270
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M+ ++ K +I+ Y L+R A D L +++ + + PD+ ++ ++D + K
Sbjct: 271 NEME-IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVK 329
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G ++E E + M PD +T+ LID + K DK + ++ P + T
Sbjct: 330 EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRT 389
Query: 328 FNSMIINYGKARL---------------------------QGKAEY--------VFQKMT 352
FN +I Y KA L QG E +FQ+M
Sbjct: 390 FNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMV 449
Query: 353 AMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
+ + P ++Y+ I + G CDN +A EIF+++ K ++ + N ++ C
Sbjct: 450 SRRVRPDIVSYK--ILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 507
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+A LF + GV PD TY ++ K L ++ME++G PN
Sbjct: 508 VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPN 561
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 176/404 (43%), Gaps = 52/404 (12%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
KS + +E+ R M++++ + D YS +I + K G A LF+EM G + D
Sbjct: 224 KSGQTALAMELLRKMEERKIKL-DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 282
Query: 181 SVYNALITAHLHT---RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
+Y LI + D AK L + + P++V ++ L+ + +
Sbjct: 283 IIYTTLIRGFCYAGRWDDGAKLLRDMI--------KRKITPDVVAFSALIDCFVKEGKLR 334
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ L KE+ + ++PD TY ++D + K + + +L M S C P+I TFN+LI
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+ Y K D ++F+ + T+N++I + + A+ +FQ+M + +
Sbjct: 395 NGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVR 454
Query: 358 PSFITYECIITMYGYCDN--VSRAREIFDEL--SKLGKDM-------------------- 393
P ++Y+ I + G CDN +A EIF+++ SK+ D+
Sbjct: 455 PDIVSYK--ILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512
Query: 394 -------------KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
V T N M+ C G +EADLLF G +P+ TY +L +A+
Sbjct: 513 DLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAH 572
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSL-AGSQ 483
KL++ +++ G + AL T + L AG +
Sbjct: 573 LGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHE 616
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 153/351 (43%), Gaps = 29/351 (8%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
QR DT Y+ LI K+ Q A + M + GC P+ +N LI + KA
Sbjct: 345 QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYC----KA 400
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+ L F+KM + + VTYN L++ + ++ LF+E+ + PDI +
Sbjct: 401 NLIDDGLELFRKMS-LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS 459
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y ++D NG ++ + +++ ++ + DI +N++I D +F SL
Sbjct: 460 YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 519
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
KP + T+N MI K +A+ +F+KM ++P+ TY +I + + +
Sbjct: 520 LKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDAT 579
Query: 378 RAREIFDELSKLGKDMKVSTL----------------------NAMLEAYCM--NGLPTE 413
++ ++ +E+ + G + STL +L +C+ N +
Sbjct: 580 KSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYD 639
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A LF+N MG P+ TY + K NM V +L +M + G PN
Sbjct: 640 APTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPN 690
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 146/331 (44%), Gaps = 19/331 (5%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
Y DT +S LI + +G+ A+ L M G +P NAL+ L K +
Sbjct: 138 YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNG-LCLNGK---V 193
Query: 201 AKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
+ A+ +M G + PN VTY +L+ ++ L +++ E + D Y
Sbjct: 194 SDAVLLIDRMVETGFQ---PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKY 250
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
+ ++D K+G + ++ + M+ K DII + LI + +D ++ + ++
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310
Query: 319 SKEKPTLPTFNSMI---INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC-- 373
K P + F+++I + GK R +AE + ++M +P +TY +I G+C
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLR---EAEELHKEMIQRGISPDTVTYTSLID--GFCKE 365
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ + +A + D + G + T N ++ YC L + LF GV D+ TY
Sbjct: 366 NQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY 425
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L + + + E+ ++L + M + P+
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEMVSRRVRPD 456
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 137/319 (42%), Gaps = 30/319 (9%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
LE+FR M R +ADT Y+ LI + G+ +A LF EM + RPD Y L+
Sbjct: 407 LELFRKMS-LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLD 465
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
+ KAL F+K++ + + +I YNI++ A VD LF L
Sbjct: 466 GLCDNGEPEKALE----IFEKIE-KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY-GKRQAFD 307
+ PD+ TYN ++ K G + E + + +M+ + P+ T+N+LI ++ G+ A
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATK 580
Query: 308 K---MEQV------------------FKSLMHSKEKPTLPTFNSMIINYGKARLQG--KA 344
+E++ ++ + +P + TF +++ + A
Sbjct: 581 SAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDA 640
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
+F+ M AM Y P+ +TY +I + +S+ + D++ + G T + +
Sbjct: 641 PTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISG 700
Query: 405 YCMNGLPTEADLLFENSHN 423
C L A LL N
Sbjct: 701 LCKQDLHGSAILLLRKMEN 719
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 6/195 (3%)
Query: 271 IKEMESV--LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
IKE ++V M ++ +P +I F+ L + + +D + + K + L T
Sbjct: 51 IKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTL 110
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDEL 386
+ MI + R A K+ + Y P +T+ +I G C VS A E+ D +
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLIN--GLCLEGRVSEALELVDRM 168
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
++G + TLNA++ C+NG ++A LL + G P+ TY + K K+
Sbjct: 169 VEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQT 228
Query: 447 ELVQKLLKRMEQNGI 461
L +LL++ME+ I
Sbjct: 229 ALAMELLRKMEERKI 243
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 125/314 (39%), Gaps = 9/314 (2%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ LF EM S RP P + + + R K L L ++KG+ N+ T
Sbjct: 56 AVDLFQEMTRS--RPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAH---NLYTL 110
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
+I++ C + R + + ++ + PD T++ +++ G + E ++ RM
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
KP +IT N L++ + ++ + +P T+ ++ K+
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAM 401
A + +KM K + Y II G C + + A +F+E+ G + +
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIID--GLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ +C G + L + +TPD + L + K ++L K M Q GI
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Query: 462 VPNKRFFLEALETF 475
P+ + ++ F
Sbjct: 349 SPDTVTYTSLIDGF 362
>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
Length = 581
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 144/323 (44%), Gaps = 6/323 (1%)
Query: 133 RWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH 192
RW+Q R Y D ++ +I + + GQ + A+ L M GC PD +N ++
Sbjct: 238 RWIQ-DRLYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCR 296
Query: 193 TRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILA 252
T + +++ ++++ C PN+VT+ ++ +A ++ A++ ++ S +
Sbjct: 297 TNE----VSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIM 352
Query: 253 PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
P+ TYN +++ YGK G + V +M +C PD++TF+ LID Y + D ++
Sbjct: 353 PNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRI 412
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM-KYTPSFITYECIITMYG 371
+ + + +P + TF+ +I + K +A + ++ P Y +I +
Sbjct: 413 WSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLC 472
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
C V A I + + G T ++ YCM +EA + F G +PDS
Sbjct: 473 KCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSI 532
Query: 432 TYKLLYKAYTKANMKELVQKLLK 454
T KA M V +++
Sbjct: 533 TVNCFISCLLKAGMPNEVDHVMR 555
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 143/312 (45%), Gaps = 12/312 (3%)
Query: 150 KLIAVMGKKGQTRLAMWLFSEMRNS-GCRPDPSVYNALITAHL--HTRDKAKALAKALGY 206
++I V+ + G+ A+ LF +M G PD + L+++ + D + L
Sbjct: 147 QIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASE 206
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE-LHESILAPDIYTYNGVMDAY 265
F C+ YN L+ + V V ALF+ + + + +PD++++N V+
Sbjct: 207 FG-------CRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGV 259
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-KPT 324
+ G +++ ++ RM C PD +T N+++D + + +V + L P
Sbjct: 260 CRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPN 319
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ TF S+I Y KA A V+ M A P+ +TY +I YG ++ A E++
Sbjct: 320 VVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQ 379
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
++++L V T +++++ YC G +A ++ + + P+ T+ ++ + K N
Sbjct: 380 QMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQN 439
Query: 445 MKELVQKLLKRM 456
+ +LL +
Sbjct: 440 RSDEAIRLLNEL 451
>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
Length = 583
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 144/323 (44%), Gaps = 6/323 (1%)
Query: 133 RWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH 192
RW+Q R Y D ++ +I + + GQ + A+ L M GC PD +N L+
Sbjct: 240 RWIQ-DRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCR 298
Query: 193 TRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILA 252
T + +++ ++++ C PN+VT+ ++ +A ++ A++ ++ S +
Sbjct: 299 TNE----VSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIM 354
Query: 253 PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
P+ TYN +++ YGK G + V +M +C PD++TF+ LID Y + D ++
Sbjct: 355 PNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRI 414
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM-KYTPSFITYECIITMYG 371
+ + + +P + TF+ +I + K +A + ++ P Y +I +
Sbjct: 415 WSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLC 474
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
C V A I + + G T ++ YCM +EA + F G +PDS
Sbjct: 475 KCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSI 534
Query: 432 TYKLLYKAYTKANMKELVQKLLK 454
T KA M V +++
Sbjct: 535 TVNCFISCLLKAGMPNEVDHVMR 557
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 142/312 (45%), Gaps = 12/312 (3%)
Query: 150 KLIAVMGKKGQTRLAMWLFSEMRNS-GCRPDPSVYNALITAHL--HTRDKAKALAKALGY 206
++I V+ + G+ A+ LF +M G PD + L+++ + D + L
Sbjct: 149 QIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASE 208
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE-LHESILAPDIYTYNGVMDAY 265
F C+ YN L+ + V V ALF+ + + + +PD++++N V+
Sbjct: 209 FG-------CRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGV 261
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-KPT 324
+ G +++ ++ RM C PD +T N+L+D + + +V + L P
Sbjct: 262 CRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPN 321
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ TF S+I Y KA A V+ M A P+ +TY +I YG ++ A E++
Sbjct: 322 VVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQ 381
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
++++L V T +++++ YC G +A ++ + + P+ T+ ++ + K N
Sbjct: 382 QMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQN 441
Query: 445 MKELVQKLLKRM 456
+ LL +
Sbjct: 442 RSDEAIGLLNEL 453
>gi|422293946|gb|EKU21246.1| hypothetical protein NGA_2092600 [Nannochloropsis gaditana CCMP526]
Length = 659
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 166/374 (44%), Gaps = 9/374 (2%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
G++ +W + L V R MQ R D ++ + +GK GQ LA+ LF+E+ + G P+
Sbjct: 237 GQARRWREALGVLREMQA-RGLRPDLVSFNTAMDALGKAGQYDLALELFTEIEDHGFAPN 295
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQV 239
YN I H +A + +A ++M+G+ +P+ V+YN ++ A A+
Sbjct: 296 LVSYNTAI----HACGRAGMVDRAHELLREMQGLS-VRPDSVSYNTVMAAFAKKNQWKAA 350
Query: 240 NALFKELHESI-LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
L E+ E+ + PD+ +YN M K G + +L+ +PD++++N ++
Sbjct: 351 LELLAEMKEAPGVDPDLISYNTAMHVCAKAGRWERATELLTEALGQGLQPDVVSYNTVMH 410
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
+ G+ + + +F + P +FN+ + +A A + ++M A P
Sbjct: 411 ACGRAGEYLQALDLFGMMEEVGVAPDRVSFNTAMHACNRALKWQAALQILREMEARSIAP 470
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+ +Y + G RA E+ +E+ G V T A ++A C G +L
Sbjct: 471 NVKSYTIAVDACGRAGEWERALELMEEMEVRGVPANVHTYTAAMDACCRGGAVDRVLVLL 530
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
E GV P+ +Y + A + + +L++M Q G+ + + AL T +
Sbjct: 531 EEMDGKGVEPNVVSYTIAMDAMNRVGKWDRASAVLEQMVQRGLRLDSVSYRTALST--AG 588
Query: 479 LAGSQSGSAKTDLT 492
AG + G T +
Sbjct: 589 RAGDEEGERLTKIV 602
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 118/258 (45%), Gaps = 3/258 (1%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
++V + + ++AC QAR + + +E+ L PD+ ++N MDA GK G +
Sbjct: 225 DVVGFTMAIKACGQARRWREALGVLREMQARGLRPDLVSFNTAMDALGKAGQYDLALELF 284
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
+ ++ + P+++++N I + G+ D+ ++ + + +P ++N+++ + K
Sbjct: 285 TEIEDHGFAPNLVSYNTAIHACGRAGMVDRAHELLREMQGLSVRPDSVSYNTVMAAFAK- 343
Query: 339 RLQGKA--EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
+ Q KA E + + A P I+Y + + RA E+ E G V
Sbjct: 344 KNQWKAALELLAEMKEAPGVDPDLISYNTAMHVCAKAGRWERATELLTEALGQGLQPDVV 403
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
+ N ++ A G +A LF +GV PD ++ A +A + ++L+ M
Sbjct: 404 SYNTVMHACGRAGEYLQALDLFGMMEEVGVAPDRVSFNTAMHACNRALKWQAALQILREM 463
Query: 457 EQNGIVPNKRFFLEALET 474
E I PN + + A++
Sbjct: 464 EARSIAPNVKSYTIAVDA 481
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 116/271 (42%), Gaps = 9/271 (3%)
Query: 210 MKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG 269
+ ++R N V YN + R D AL L ++ D+ + + A G+
Sbjct: 189 LHAIDRALVNFVLYNCM-------RRRDWTRAL-TVLDAPLIEVDVVGFTMAIKACGQAR 240
Query: 270 MIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFN 329
+E VL M++ +PD+++FN +D+ GK +D ++F + P L ++N
Sbjct: 241 RWREALGVLREMQARGLRPDLVSFNTAMDALGKAGQYDLALELFTEIEDHGFAPNLVSYN 300
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
+ I G+A + +A + ++M + P ++Y ++ + + A E+ E+ +
Sbjct: 301 TAIHACGRAGMVDRAHELLREMQGLSVRPDSVSYNTVMAAFAKKNQWKAALELLAEMKEA 360
Query: 390 -GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
G D + + N + G A L + G+ PD +Y + A +A
Sbjct: 361 PGVDPDLISYNTAMHVCAKAGRWERATELLTEALGQGLQPDVVSYNTVMHACGRAGEYLQ 420
Query: 449 VQKLLKRMEQNGIVPNKRFFLEALETFSSSL 479
L ME+ G+ P++ F A+ + +L
Sbjct: 421 ALDLFGMMEEVGVAPDRVSFNTAMHACNRAL 451
>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 621
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 150/355 (42%), Gaps = 39/355 (10%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D+ + + +I G+ AM +F +M+ GC+P S YN LI ++
Sbjct: 129 DSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGF----GIVGRPYES 184
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ + M E KPN TYNIL++A + +++ + ++ S + PD+ TYN +
Sbjct: 185 MKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMAR 244
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD-------KMEQ----- 311
AY +NG ++ E ++ +M+ N+ KP+ T ++I Y K +M++
Sbjct: 245 AYAQNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHP 304
Query: 312 ---VFKSLMHS--------------------KEKPTLPTFNSMIINYGKARLQGKAEYVF 348
VF SL+ KP + TF++++ + A L E +F
Sbjct: 305 NPVVFNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIF 364
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
M P Y + Y +A + +SK G V ++ +C
Sbjct: 365 NDMVKAGIEPDIHAYSILAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAA 424
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
G A L E H MG +P+ TY+ L Y +A +++L ME+ G+VP
Sbjct: 425 GKMDRAFSLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEEILSTMEERGVVP 479
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 150/322 (46%), Gaps = 6/322 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+A + ++ + + L S++ ++G +PD + NA+I A D K + +A+ F
Sbjct: 98 YTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAF---SDSGK-VDEAMKIF 153
Query: 208 QKMKGMERCKPNIVTYNILLRACA-QARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
QKMK CKP TYN L++ R + + L + + P+ TYN ++ A+
Sbjct: 154 QKMKEY-GCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWC 212
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
++E +VL +M ++ +PD++T+N + +Y + +K E++ + ++K KP
Sbjct: 213 TKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETEKAERLILKMQYNKVKPNER 272
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T +I Y K +A +M + P+ + + +I Y + + E +
Sbjct: 273 TCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGVDEALTLM 332
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
+ G V T + ++ A+ GL + +F + G+ PD Y +L K Y +A
Sbjct: 333 EEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQP 392
Query: 447 ELVQKLLKRMEQNGIVPNKRFF 468
+ LL M + G+ N F
Sbjct: 393 RKAESLLTSMSKYGVQTNVVIF 414
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 113/266 (42%), Gaps = 1/266 (0%)
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
E KP ++TY L+ A + + + AL ++ ++ + PD N +++A+ +G + E
Sbjct: 89 EGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSDSGKVDE 148
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYG-KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
+ +MK CKP T+N LI +G + ++ M+ + KP T+N +I
Sbjct: 149 AMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQDENVKPNDRTYNILI 208
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKD 392
+ + +A V KM A P +TY + Y +A + ++
Sbjct: 209 QAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETEKAERLILKMQYNKVK 268
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
T ++ YC G TEA +GV P+ + L K Y A V +
Sbjct: 269 PNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGVDEA 328
Query: 453 LKRMEQNGIVPNKRFFLEALETFSSS 478
L ME+ GI P+ F + +SS+
Sbjct: 329 LTLMEEFGIKPDVVTFSTIMNAWSSA 354
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 128/279 (45%), Gaps = 5/279 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ + + G+T A L +M+ + +P+ +I+ + K + +A
Sbjct: 235 DVVTYNTMARAYAQNGETEKAERLILKMQYNKVKPNERTCGIIISGYC----KEGNMTEA 290
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L + +MK + PN V +N L++ A + + V+ + E + PD+ T++ +M+
Sbjct: 291 LRFLYRMKEL-GVHPNPVVFNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMN 349
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
A+ G++ E + + M +PDI +++L Y + K E + S+ +
Sbjct: 350 AWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAESLLTSMSKYGVQT 409
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ F ++I + A +A + +KM M +P+ TYE +I YG +A EI
Sbjct: 410 NVVIFTTIISGWCAAGKMDRAFSLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEEIL 469
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
+ + G ++ST+ + +A+ GL EA+ + S
Sbjct: 470 STMEERGVVPEMSTMQLVADAWRAIGLFKEANRILNGSE 508
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/379 (20%), Positives = 159/379 (41%), Gaps = 45/379 (11%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM-RNS 174
F + GK D + +++F+ M K+ T Y+ LI G G+ +M L M ++
Sbjct: 140 FSDSGKVD---EAMKIFQKM-KEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQDE 195
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
+P+ YN LI A K L +A KM +P++VTYN + RA AQ
Sbjct: 196 NVKPNDRTYNILIQAWC----TKKKLEEAWNVLHKMVA-SGIQPDVVTYNTMARAYAQNG 250
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE--------------------- 273
++ L ++ + + P+ T ++ Y K G + E
Sbjct: 251 ETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFN 310
Query: 274 --------------MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
++ L+ M+ KPD++TF+ +++++ D E++F ++ +
Sbjct: 311 SLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKA 370
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
+P + ++ + Y +A KAE + M+ + + + II+ + + RA
Sbjct: 371 GIEPDIHAYSILAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRA 430
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+ +++ ++G + T ++ Y P +A+ + GV P+ ST +L+ A
Sbjct: 431 FSLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEEILSTMEERGVVPEMSTMQLVADA 490
Query: 440 YTKANMKELVQKLLKRMEQ 458
+ + + ++L E+
Sbjct: 491 WRAIGLFKEANRILNGSEE 509
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 106/237 (44%), Gaps = 11/237 (4%)
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ A+F L E P + TY ++ A + K + ++LS++ N KPD I N +I
Sbjct: 78 EAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMI 137
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM--- 354
+++ D+ ++F+ + KPT T+N++I +G + G+ Y K+ M
Sbjct: 138 NAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFG---IVGRP-YESMKLLEMMGQ 193
Query: 355 --KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
P+ TY +I + + A + ++ G V T N M AY NG
Sbjct: 194 DENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETE 253
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTK-ANMKELVQKLLKRMEQNGIVPNKRFF 468
+A+ L V P+ T ++ Y K NM E + + L RM++ G+ PN F
Sbjct: 254 KAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEAL-RFLYRMKELGVHPNPVVF 309
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 7/216 (3%)
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
++ +M+A G E ++V + KP +IT+ L+ + +++ F + +
Sbjct: 60 VHARTKLMNALIGKGKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLS 119
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
+ + KP N+MI + + +A +FQKM P+ TY +I +G
Sbjct: 120 KVADNGMKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGI-- 177
Query: 375 NVSRAREIFDELSKLGKDMKVS----TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
V R E L +G+D V T N +++A+C EA + G+ PD
Sbjct: 178 -VGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDV 236
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
TY + +AY + E ++L+ +M+ N + PN+R
Sbjct: 237 VTYNTMARAYAQNGETEKAERLILKMQYNKVKPNER 272
>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
Length = 586
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 144/323 (44%), Gaps = 6/323 (1%)
Query: 133 RWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH 192
RW+Q R Y D ++ +I + + GQ + A+ L M GC PD +N ++
Sbjct: 243 RWIQ-DRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCR 301
Query: 193 TRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILA 252
T + +++ ++++ C PN+VT+ ++ +A ++ A++ ++ S +
Sbjct: 302 TNE----VSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIM 357
Query: 253 PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
P+ TYN +++ YGK G + V +M +C PD++TF+ LID Y + D ++
Sbjct: 358 PNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRI 417
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM-KYTPSFITYECIITMYG 371
+ + + +P + TF+ +I + K +A + ++ P Y +I +
Sbjct: 418 WSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLC 477
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
C V A I + + G T ++ YCM +EA + F G +PDS
Sbjct: 478 KCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSI 537
Query: 432 TYKLLYKAYTKANMKELVQKLLK 454
T KA M V +++
Sbjct: 538 TVNCFISCLLKAGMPNEVDHVMR 560
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 141/312 (45%), Gaps = 12/312 (3%)
Query: 150 KLIAVMGKKGQTRLAMWLFSEMRNS-GCRPDPSVYNALITAHLHTR--DKAKALAKALGY 206
++I V+ + G+ A+ LF +M G PD + L+++ D + L
Sbjct: 152 QIIVVLCRSGRQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASE 211
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE-LHESILAPDIYTYNGVMDAY 265
F C+ YN L+ + V V ALF+ + + + +PD++++N V+
Sbjct: 212 FG-------CRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGV 264
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-KPT 324
+ G +++ ++ RM C PD +T N+++D + + +V + L P
Sbjct: 265 CRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPN 324
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ TF S+I Y KA A V+ M A P+ +TY +I YG ++ A E++
Sbjct: 325 VVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQ 384
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
++++L V T +++++ YC G +A ++ + + P+ T+ ++ + K N
Sbjct: 385 QMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQN 444
Query: 445 MKELVQKLLKRM 456
+ LL +
Sbjct: 445 RSDEAICLLNEL 456
>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 147/320 (45%), Gaps = 8/320 (2%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ L++V+ K+ Q A++LF E PD +N LI + + +A
Sbjct: 145 VYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLC----RVGGVDRAFEV 200
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH-ESILAPDIYTYNGVMDAY 265
F+ M+ C P++VTYN L+ +A V + LFKE+ S +PDI TY ++ +
Sbjct: 201 FKDMESFG-CLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGF 259
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K+G +KE ++ M + +P++ITFN+LID +GK + E +++ + + +
Sbjct: 260 CKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADV 319
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
TF S+I Y +A + M +P+ TY +I + ++ AR+ +
Sbjct: 320 VTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQ 379
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY-TKAN 444
+ K N +++ +C G E +++ + PD T+ +L + K
Sbjct: 380 IKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGR 439
Query: 445 MKELVQKLLKRMEQNGIVPN 464
M E + + RM P+
Sbjct: 440 MFEAIN-IFNRMLATRCAPD 458
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 131/302 (43%), Gaps = 4/302 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT ++ LI + + G A +F +M + GC PD YN LI KA + +
Sbjct: 177 DTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLC----KANEVQRG 232
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F++++ C P+IVTY ++ ++ + + + LF+E+ S + P++ T+N ++D
Sbjct: 233 CELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLID 292
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+GK G I E E++ +M C D++TF LID Y + + + + + P
Sbjct: 293 GFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSP 352
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T+ T+ +I K +A ++ P Y +I + NV I
Sbjct: 353 TVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVIL 412
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
E+ + D T ++ +C+ G EA +F PD+ T L KA
Sbjct: 413 KEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKA 472
Query: 444 NM 445
M
Sbjct: 473 GM 474
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 157/364 (43%), Gaps = 20/364 (5%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VF +M ++ D+ + L+ M + + L +E++ R + VYN L++
Sbjct: 95 VFDYMGSD-GHLPDSKLLGFLVTWMAQASDFDMVKKLLAEVQGKEVRINSFVYNNLLSVL 153
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
+ K + +A+ F++ M+ P+ T+NIL+R + VD+ +FK++
Sbjct: 154 V----KQNQVHEAIYLFKEYLVMQS-PPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFG 208
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS-NQCKPDIITFNLLIDSYGKRQAFDKM 309
PD+ TYN +++ K ++ + ++S + C PDI+T+ +I + K +
Sbjct: 209 CLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEA 268
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
+F+ +M S +P + TFN +I +GK +AE +++KM + +T+ +I
Sbjct: 269 SNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDG 328
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
Y V+ + ++ + V T ++ A C EA N + P
Sbjct: 329 YCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPK 388
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF-------------LEALETFS 476
Y + + KA + +LK ME+ P+K F EA+ F+
Sbjct: 389 PFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFN 448
Query: 477 SSLA 480
LA
Sbjct: 449 RMLA 452
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 144/334 (43%), Gaps = 10/334 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT--AHLHTRDKAKALAKALG 205
Y+ L+ + + G L +F M + G PD + L+T A D K L
Sbjct: 76 YNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKL----- 130
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+++G E + N YN LL + V + LFKE PD +T+N ++
Sbjct: 131 -LAEVQGKE-VRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGL 188
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM-HSKEKPT 324
+ G + V M+S C PD++T+N LI+ K + ++FK + S P
Sbjct: 189 CRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPD 248
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ T+ S+I + K+ +A +F++M P+ IT+ +I +G N++ A ++
Sbjct: 249 IVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYR 308
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+++ V T ++++ YC G + V+P TY +L A K N
Sbjct: 309 KMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKEN 368
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ L +++ + I+P + ++ F +
Sbjct: 369 RLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKA 402
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 117/256 (45%), Gaps = 9/256 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L K+++ + E+F+ +Q + D Y+ +I+ K G+ + A LF EM S
Sbjct: 219 LINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRS 278
Query: 175 GCRPDPSVYNALITAH--LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
G +P+ +N LI + +A+A+ + + YF C ++VT+ L+ +
Sbjct: 279 GIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFD-------CSADVVTFTSLIDGYCR 331
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
A V+ + + ++P +YTY +++A K + E L ++K++ P
Sbjct: 332 AGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFM 391
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N +ID + K D+ + K + + P TF +II + +A +F +M
Sbjct: 392 YNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRML 451
Query: 353 AMKYTPSFITYECIIT 368
A + P IT +I+
Sbjct: 452 ATRCAPDNITVNSLIS 467
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 6/230 (2%)
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
TYN+L+R+ Q + D VN +F + PD ++ + ++ +L+ +
Sbjct: 75 TYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEV 134
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
+ + + + +N L+ K+ + +FK + + P TFN +I G R+
Sbjct: 135 QGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILI--RGLCRVG 192
Query: 342 G--KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL-SKLGKDMKVSTL 398
G +A VF+ M + P +TY +I + V R E+F E+ S+ + T
Sbjct: 193 GVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTY 252
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK-ANMKE 447
+++ +C +G EA LFE G+ P+ T+ +L + K N+ E
Sbjct: 253 TSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAE 302
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 90/221 (40%), Gaps = 1/221 (0%)
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TYN +M + + G + V M S+ PD L+ + FD ++++ +
Sbjct: 75 TYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEV 134
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+ + +N+++ K +A Y+F++ M+ P T+ +I V
Sbjct: 135 QGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGV 194
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYC-MNGLPTEADLLFENSHNMGVTPDSSTYKL 435
RA E+F ++ G V T N ++ C N + +L E +PD TY
Sbjct: 195 DRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTS 254
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+ + K+ + L + M ++GI PN F ++ F
Sbjct: 255 IISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFG 295
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 164/367 (44%), Gaps = 15/367 (4%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + K + + + MQ Q D YS LI+ + + G+ A+ F++M
Sbjct: 296 ILIDAYAKRGMMDEAMLILSEMQGQGLS-PDVFTYSTLISALCRMGRLADAVDKFNQMIG 354
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQ 232
+G +P+ VY++LI D KA K L Y G+ R PNI +N ++ + C +
Sbjct: 355 TGVQPNTVVYHSLIQGFCTHGDLVKA--KELVYEMMNNGIPR--PNIAFFNSIVHSICKE 410
Query: 233 ARNVD--QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
R +D + L K++ E DI +N ++D Y G + + SVL M S PD
Sbjct: 411 GRVMDAHHIFDLVKDIGER---SDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDT 467
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
T+N L++ Y K D +F+ + K KPT T+N ++ +A A+ + +
Sbjct: 468 FTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHE 527
Query: 351 MTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
M T S TY I + G C N A +F +L + ++TLN M+ +
Sbjct: 528 MIGCGTTVSLPTYN--IILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTV 585
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
EA LF + G+ P++STY ++ + K E + ME++G P R
Sbjct: 586 QRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLL 645
Query: 469 LEALETF 475
+ + T
Sbjct: 646 NDTIRTL 652
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 149/329 (45%), Gaps = 6/329 (1%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K +A+ +++ LI K+G AM + SEM+ G PD Y+ LI+A +
Sbjct: 283 KGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALC----R 338
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDI 255
LA A+ F +M G +PN V Y+ L++ C V +++ ++ I P+I
Sbjct: 339 MGRLADAVDKFNQMIG-TGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNI 397
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
+N ++ + K G + + + +K + DII FN LID Y K V +
Sbjct: 398 AFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDA 457
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
++ + P T+N+++ Y K+ +F++M+ K P+ +TY I+
Sbjct: 458 MISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGR 517
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
A+++ E+ G + + T N +L+ C N EA ++F+ M V + +T
Sbjct: 518 TVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNT 577
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ + +E + L + +G+VPN
Sbjct: 578 MINSMYTVQRREEAKDLFSAISDSGLVPN 606
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 165/378 (43%), Gaps = 19/378 (5%)
Query: 60 CCVWTRPRS---------KRGRKSEELESKELVRVLM---RSFSDKEPLVRTLNKYVKVV 107
CC RP + G K+++ + +++ L R+ + L+R + + V
Sbjct: 18 CCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLRRMTELGCVP 77
Query: 108 RSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIA-DTGIYSKLIAVMGKKGQTRLAMW 166
+ ++ + L ++ Q L++ R M K+ + D Y+ +I K+G+ A
Sbjct: 78 DAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACN 137
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
L+ EM G PD +N++I A KA+A+ A ++M PN VTY +
Sbjct: 138 LYHEMMQQGFVPDVVTHNSIINALC----KARAVDNAELLLRQMVD-NGVPPNKVTYTSM 192
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+ + ++ +F+E+ L PDI ++N MD+ K+G KE + M +
Sbjct: 193 IHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGH 252
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
+P+I+T+ +L+ Y F M F ++ F +I Y K + +A
Sbjct: 253 RPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAML 312
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+ +M +P TY +I+ ++ A + F+++ G +++++ +C
Sbjct: 313 ILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFC 372
Query: 407 MNG-LPTEADLLFENSHN 423
+G L +L++E +N
Sbjct: 373 THGDLVKAKELVYEMMNN 390
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 137/312 (43%), Gaps = 5/312 (1%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
L M GC PD Y A++ L ++++ L K +G+ C P++VTYN +
Sbjct: 66 LLRRMTELGCVPDAFSY-AIVLKRLCDDNRSQQALDLLRMMAKEEGV--CSPDVVTYNTV 122
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+ + + + L+ E+ + PD+ T+N +++A K + E +L +M N
Sbjct: 123 IHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGV 182
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
P+ +T+ +I Y +++ ++F+ + P + ++NS + + K +A
Sbjct: 183 PPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAE 242
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+F M A + P+ +TY ++ Y + F+ + G +++AY
Sbjct: 243 IFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYA 302
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK-ANMKELVQKLLKRMEQNGIVPNK 465
G+ EA L+ G++PD TY L A + + + V K +M G+ PN
Sbjct: 303 KRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDK-FNQMIGTGVQPNT 361
Query: 466 RFFLEALETFSS 477
+ ++ F +
Sbjct: 362 VVYHSLIQGFCT 373
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 130/306 (42%), Gaps = 10/306 (3%)
Query: 163 LAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVT 222
L + F + +G + D + N ++ T+ A+ L ++ C P+ +
Sbjct: 26 LGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLRRMTELG----CVPDAFS 81
Query: 223 YNILL-RACAQARN---VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
Y I+L R C R+ +D + + KE E + +PD+ TYN V+ + K G I + ++
Sbjct: 82 YAIVLKRLCDDNRSQQALDLLRMMAKE--EGVCSPDVVTYNTVIHGFFKEGKIGKACNLY 139
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
M PD++T N +I++ K +A D E + + ++ + P T+ SMI Y
Sbjct: 140 HEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTL 199
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
+A +F++MT P +++ + A EIF ++ G + T
Sbjct: 200 GRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTY 259
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
+L Y G + F G+ + + +L AY K M + +L M+
Sbjct: 260 GILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQG 319
Query: 459 NGIVPN 464
G+ P+
Sbjct: 320 QGLSPD 325
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 121/294 (41%), Gaps = 6/294 (2%)
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
C PD YN +I H K + KA + +M + P++VT+N ++ A +AR
Sbjct: 112 CSPDVVTYNTVI----HGFFKEGKIGKACNLYHEMM-QQGFVPDVVTHNSIINALCKARA 166
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
VD L +++ ++ + P+ TY ++ Y G +E + M PDI+++N
Sbjct: 167 VDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNS 226
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
+DS K + ++F S+ +P + T+ ++ Y F M
Sbjct: 227 FMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDG 286
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
+ + + +I Y + A I E+ G V T + ++ A C G +A
Sbjct: 287 IVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAV 346
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV-PNKRFF 468
F GV P++ Y L + + ++L+ M NGI PN FF
Sbjct: 347 DKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFF 400
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 111/256 (43%), Gaps = 3/256 (1%)
Query: 224 NILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
N +L+ C R D V L + + E PD ++Y V+ + ++ +L M
Sbjct: 47 NTVLKCLCCTKRTDDAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMA 106
Query: 283 SNQ--CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
+ C PD++T+N +I + K K ++ +M P + T NS+I KAR
Sbjct: 107 KEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARA 166
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
AE + ++M P+ +TY +I Y A ++F E++ G + + N+
Sbjct: 167 VDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNS 226
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+++ C +G EA +F + G P+ TY +L Y + M+ +G
Sbjct: 227 FMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDG 286
Query: 461 IVPNKRFFLEALETFS 476
IV N F ++ ++
Sbjct: 287 IVANCLVFTILIDAYA 302
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 64/144 (44%), Gaps = 8/144 (5%)
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS-- 396
R + + ++MT + P +Y I + CD+ +R+++ D L + K+ V
Sbjct: 58 RTDDAVKVLLRRMTELGCVPDAFSYA--IVLKRLCDD-NRSQQALDLLRMMAKEEGVCSP 114
Query: 397 ---TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
T N ++ + G +A L+ G PD T+ + A KA + + LL
Sbjct: 115 DVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLL 174
Query: 454 KRMEQNGIVPNKRFFLEALETFSS 477
++M NG+ PNK + + +S+
Sbjct: 175 RQMVDNGVPPNKVTYTSMIHGYST 198
>gi|297852926|ref|XP_002894344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340186|gb|EFH70603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 650
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 166/373 (44%), Gaps = 31/373 (8%)
Query: 108 RSEHCF-LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMW 166
R E+ + ++ +G+ K+ + + +F M + + G Y+ L+ V+ K A+
Sbjct: 268 RDEYSYTIMIRTMGRIGKYDEAVGLFNEMITEGLTLNVVG-YNTLMQVLAKGKMVDKAIQ 326
Query: 167 LFSEMRNSGCRPDPSVYNAL------------------ITAHLHTRDKAKALAKALGYFQ 208
+FS M +GCRP+ Y+ + I+ T+ L + L
Sbjct: 327 VFSRMVETGCRPNEYTYSLVLNLLVAEGQLVRLDGIVEISKRYMTQGIYSYLVRTLSKLG 386
Query: 209 KMKGMERCKPNIVTY----------NILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
+ R ++ ++ ++L C + ++ + L K +HE + D Y
Sbjct: 387 HVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSK-IHEKGVVTDTMMY 445
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N V A GK I + + +MK + PDI T+N+LI S+G+ D+ +F+ L
Sbjct: 446 NTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEVDEAINIFEELER 505
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
S KP + ++NS+I GK +A F++M P +TY ++ +G + V
Sbjct: 506 SDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEM 565
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A +F+E+ G + T N +L+ +G EA L+ G+TPDS TY +L +
Sbjct: 566 AYSLFEEMLVKGCQPNIVTYNILLDCLEKSGRTAEAVDLYTKMKQQGLTPDSITYTVLER 625
Query: 439 AYTKANMKELVQK 451
+ ++ K +++
Sbjct: 626 LQSGSHGKSRIRR 638
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 139/324 (42%), Gaps = 21/324 (6%)
Query: 146 GIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALG 205
G S + ++G G T ++ G + + Y L+ A+L +RD +KA
Sbjct: 169 GNISTVNILIGFFGDTEDLQMCLRLVKKWGLKMNSFTYKCLLQAYLRSRDSSKAFDV--- 225
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
Y + +G K +I YN+LL A A+ QV F+++ + D Y+Y ++
Sbjct: 226 YCEIRRGGH--KLDIFAYNMLLDALAKDEKACQV---FEDMKKRHCRRDEYSYTIMIRTM 280
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
G+ G E + + M + +++ +N L+ K + DK QVF ++ + +P
Sbjct: 281 GRIGKYDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNE 340
Query: 326 PTFNSMIINYGKA-----RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
T+ S+++N A RL G E + MT Y ++ +VS A
Sbjct: 341 YTY-SLVLNLLVAEGQLVRLDGIVEISKRYMTQG-------IYSYLVRTLSKLGHVSEAH 392
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+F ++ + + +MLE+ C G EA + H GV D+ Y ++ A
Sbjct: 393 RLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSAL 452
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
K + L ++M+++G P+
Sbjct: 453 GKLKQISHIHDLFEKMKKDGPSPD 476
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 155/344 (45%), Gaps = 15/344 (4%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR---DKA 197
Y D Y+ +I + K + A F E+ G RP+ Y AL+ ++ D A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+ L+ + ++ PN++TY+ LL A + V + LF+E+ + PDI T
Sbjct: 246 RLLSDMIK--------KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y+ +++ + I E + M S C D++++N LI+ + K + + ++F+ +
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN-- 375
T+N++I + +A KA+ F +M +P TY I + G CDN
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN--ILLGGLCDNGE 415
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+ +A IF+++ K D+ + T ++ C G EA LF + G+ PD TY
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 475
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSL 479
+ + V+ L +M+Q G++ N + T S+ L
Sbjct: 476 MMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAEL 519
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 141/303 (46%), Gaps = 9/303 (2%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIV 221
A+ L +M G +PD YNA+I + T K + A +F+++ KG+ +PN+V
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKT----KRVNDAFDFFKEIERKGI---RPNVV 226
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
TY L+ + L ++ + + P++ TY+ ++DA+ KNG + E + + M
Sbjct: 227 TYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
PDI+T++ LI+ D+ Q+F ++ + ++N++I + KA+
Sbjct: 287 VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRV 346
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
+F++M+ + +TY +I + +V +A+E F ++ G + T N +
Sbjct: 347 EDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 406
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
L C NG +A ++FE+ + D TY + + K E L + G+
Sbjct: 407 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466
Query: 462 VPN 464
P+
Sbjct: 467 KPD 469
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 144/303 (47%), Gaps = 9/303 (2%)
Query: 164 AMWLFSEMRNSGCRPDPSV--YNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV 221
A+ LFS+M S RP PS+ +N L++A + K + +LG ++ G+ + ++
Sbjct: 69 AIDLFSDMVKS--RPFPSIVDFNRLLSAIVKL--KKYDVVISLGKKMEVLGI---RNDLY 121
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
T+NI++ V ++ ++ + PD T +++ + + + + S++ +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
KPDI+ +N +IDS K + + FK + +P + T+ +++ +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
A + M K TP+ ITY ++ + V A+E+F+E+ ++ D + T +++
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ C++ EA+ +F+ + G D +Y L + KA E KL + M Q G+
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 462 VPN 464
V N
Sbjct: 362 VSN 364
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 10/239 (4%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + K+ K L+ E+F M + D YS LI + + A +F M +
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMS-IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQ 232
GC D YN LI KAK + + F++M +G+ N VTYN L++ Q
Sbjct: 325 GCLADVVSYNTLINGFC----KAKRVEDGMKLFREMSQRGLV---SNTVTYNTLIQGFFQ 377
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
A +VD+ F ++ ++PDI+TYN ++ NG +++ + M+ + DI+T
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 437
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
+ +I K ++ +F SL KP + T+ +M+ L + E ++ KM
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 114/263 (43%), Gaps = 16/263 (6%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L S +W + M K++ + YS L+ K G+ A LF EM
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKK-ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 289
Query: 175 GCRPDPSVYNALITA-HLHTR-DKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRAC 230
PD Y++LI LH R D+A + F M KG C ++V+YN L+
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQM------FDLMVSKG---CLADVVSYNTLINGF 340
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
+A+ V+ LF+E+ + L + TYN ++ + + G + + + S+M PDI
Sbjct: 341 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
T+N+L+ +K +F+ + + + T+ ++I K +A +F
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 460
Query: 351 MTAMKYTPSFITYECIITMYGYC 373
++ P +TY + M G C
Sbjct: 461 LSLKGLKPDIVTYTTM--MSGLC 481
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 82/190 (43%), Gaps = 4/190 (2%)
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P I+ FN L+ + K + +D + + K + + L TFN +I + A +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 348 FQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
KM + Y P +T ++ G+C + VS A + D++ ++G + NA++++
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVN--GFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSL 200
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
C +A F+ G+ P+ TY L ++ +LL M + I PN
Sbjct: 201 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV 260
Query: 466 RFFLEALETF 475
+ L+ F
Sbjct: 261 ITYSALLDAF 270
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 78/186 (41%), Gaps = 7/186 (3%)
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+F ++ S+ P++ FN ++ K + + +KM + T+ +I +
Sbjct: 71 DLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCF 130
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
C VS A I ++ KLG + T+ +++ +C ++A L + +G PD
Sbjct: 131 CCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDI 190
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTD 490
Y + + K K +E+ GI PN + T+++ + G + S +D
Sbjct: 191 VAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN-------VVTYTALVNGLCNSSRWSD 243
Query: 491 LTRSLS 496
R LS
Sbjct: 244 AARLLS 249
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 163/345 (47%), Gaps = 24/345 (6%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
EV+R M + R + Y+ LI G+ + + F EM +GC P+ YN LI A
Sbjct: 200 EVYREMIRSRVS-PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDA 258
Query: 190 HLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
+ K + +A G + M KGM+ PN+++YN+++ + ++ + + +E+
Sbjct: 259 YC----KMGRIDEAFGLLKSMSSKGMQ---PNLISYNVIINGLCREGSMKEAWEILEEMG 311
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
PD TYN +++ Y K G + + + M N P ++T+ LI+S K + +
Sbjct: 312 YKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLN 371
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
+ + F + +P T+ ++I + + L +A + +MT ++PS +TY I
Sbjct: 372 RAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFI 431
Query: 368 TMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM- 424
+G+C + + A + E+ + G V + + ++ +C G E D F+ M
Sbjct: 432 --HGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKG---ELDRAFQMKQEMV 486
Query: 425 --GVTPDSSTYKLLYKAYTKANMKELVQ--KLLKRMEQNGIVPNK 465
GV+PD+ TY L + + M+ L + L + M G+ P++
Sbjct: 487 EKGVSPDAVTYSSLIQGLCE--MRRLTEACDLSQEMLDMGLPPDE 529
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 148/317 (46%), Gaps = 6/317 (1%)
Query: 149 SKLIAVMGKKGQTRL-AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
S L A++ +G +L A ++ EM S P+ YN LI + L K LG F
Sbjct: 182 SVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGE----LQKGLGCF 237
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M+ C PN+VTYN L+ A + +D+ L K + + P++ +YN +++ +
Sbjct: 238 GEME-RNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCR 296
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G +KE +L M PD +T+N L++ Y K F + + ++ + P++ T
Sbjct: 297 EGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVT 356
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ ++I + KAR +A F +M P+ TY +I + ++ A I +E++
Sbjct: 357 YTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMT 416
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ G V T NA + +C+ EA + + G+ PD +Y + + + +
Sbjct: 417 ESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELD 476
Query: 448 LVQKLLKRMEQNGIVPN 464
++ + M + G+ P+
Sbjct: 477 RAFQMKQEMVEKGVSPD 493
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 137/293 (46%), Gaps = 3/293 (1%)
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
++SG P YN+++ A + +R K A+ + Y + ++ R PN+ TYNIL+R
Sbjct: 169 KSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEV-YREMIR--SRVSPNVYTYNILIRGFC 225
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ + F E+ + P++ TYN ++DAY K G I E +L M S +P++I
Sbjct: 226 SVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLI 285
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
++N++I+ + + + ++ + + + P T+N+++ Y K +A + +M
Sbjct: 286 SYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEM 345
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+PS +TY +I N++RA E FD++ G T +++ + GL
Sbjct: 346 VRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLL 405
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA + G +P TY + E +++ M + G+ P+
Sbjct: 406 NEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPD 458
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 146/319 (45%), Gaps = 9/319 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I + ++G + A + EM G PD YN L+ + K +AL
Sbjct: 287 YNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYC----KEGNFHQALVIH 342
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M P++VTY L+ + +ARN+++ F ++ L P+ TY ++D + +
Sbjct: 343 AEMV-RNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSR 401
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G++ E +L+ M + P ++T+N I + + ++ V + ++ P + +
Sbjct: 402 QGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVS 461
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRAREIFDE 385
++++I + + +A + Q+M +P +TY +I G C+ ++ A ++ E
Sbjct: 462 YSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQ--GLCEMRRLTEACDLSQE 519
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ +G T ++ AYC+ G +A L + + G PD+ TY +L K
Sbjct: 520 MLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQAR 579
Query: 446 KELVQKLLKRMEQNGIVPN 464
++LL ++ VP+
Sbjct: 580 TREAKRLLFKLIYEESVPS 598
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 155/376 (41%), Gaps = 55/376 (14%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
+ + D Y+ L+ K+G A+ + +EM +G P Y ALI + KA+
Sbjct: 313 KGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMC----KAR 368
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
L +A+ +F +M+ + +PN TY L+ ++ +++ + E+ ES +P + TY
Sbjct: 369 NLNRAMEFFDQMR-IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTY 427
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N + + ++E V+ M PD+++++ +I + ++ D+ Q+ + ++
Sbjct: 428 NAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVE 487
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
P T++S+I + R +A + Q+M M P TY +I Y ++++
Sbjct: 488 KGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNK 547
Query: 379 AREIFDELSKLG------------------------------------------------ 390
A + DE+ G
Sbjct: 548 ALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIE 607
Query: 391 --KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
+++ ++ A+++ +CM GL EAD +FE+ P + Y ++ + +
Sbjct: 608 NCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPK 667
Query: 449 VQKLLKRMEQNGIVPN 464
L K M +G VP+
Sbjct: 668 AFNLYKEMIHSGFVPH 683
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 115/259 (44%), Gaps = 6/259 (2%)
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN-GMIK-EMESVLS 279
+++++++ + +DQ S P + +YN V+DA ++ G +K E V
Sbjct: 144 VFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYR 203
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
M ++ P++ T+N+LI + K F + + P + T+N++I Y K
Sbjct: 204 EMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMG 263
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVST 397
+A + + M++ P+ I+Y II G C ++ A EI +E+ G T
Sbjct: 264 RIDEAFGLLKSMSSKGMQPNLISYNVIIN--GLCREGSMKEAWEILEEMGYKGFTPDEVT 321
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
N +L YC G +A ++ GV+P TY L + KA + +M
Sbjct: 322 YNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMR 381
Query: 458 QNGIVPNKRFFLEALETFS 476
G+ PN+R + ++ FS
Sbjct: 382 IRGLRPNERTYTTLIDGFS 400
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 88/207 (42%), Gaps = 26/207 (12%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS LI + + + A L EM + G PD Y LI A+ D L KA
Sbjct: 493 DAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGD----LNKA 548
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRAC-AQARNVDQVNALFKELHESILAPDIYTYNG 260
L +M KG P+ VTY++L+ QAR + LFK ++E + D+ TY+
Sbjct: 549 LHLHDEMIHKGF---LPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDV-TYDT 604
Query: 261 VMD---------------AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+++ + G++ E + V M KP +N++I + +
Sbjct: 605 LIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGN 664
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMI 332
K ++K ++HS P T ++I
Sbjct: 665 LPKAFNLYKEMIHSGFVPHTVTVITLI 691
>gi|298707411|emb|CBJ30040.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 564
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 156/359 (43%), Gaps = 6/359 (1%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
G+ +W + L + ++ + D YS L++ + + G+ + L MR+ G PD
Sbjct: 45 GRKGQWKEALTAAN-LAREDGVVFDVYTYSVLMSAVARSGRWEEVLVLLDVMRSEGVAPD 103
Query: 180 PSVYNALITAHLHTRDKAKALA----KALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
+ A + A +A+A +AL +M + PN+ T++ + AC A
Sbjct: 104 HFAFGAAVNACAKGGQWERAVALLDQRALRLLGEMAAVG-LSPNVTTFSSAVAACGNAGQ 162
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
++ L ++ E + P+ +T++ + A GK G + ++L RM++ C P++ T+
Sbjct: 163 WERALGLLDQMAEEGVPPNEFTFSAAVSACGKAGQWRPALTILRRMRAANCPPNVQTYTA 222
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
ID+ GK + + + + P + TFNS I G +A + + M +M
Sbjct: 223 AIDACGKAGEWRLAQGLLAEMREKGVAPNVITFNSAISALGNGGQWQEALNLLRDMPSMG 282
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
P+ +Y +T G + +RA + +++ G + A ++A G A
Sbjct: 283 VQPNMWSYTAAVTACGDNNRWARALAVHEQMRSRGIRGDEVSFTAAIDACAQGGAWEMAL 342
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
L + + G+ P ++ A K LL+ ME+ G+ PN+ F A++
Sbjct: 343 ALLDEMRDEGIPPTVRSFSTAISACGKGQQWGRAVALLREMEEVGVSPNEVSFNAAIDA 401
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 117/262 (44%), Gaps = 6/262 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+S ++ GK GQ R A+ + MR + C P+ Y A I A KA A G
Sbjct: 185 FSAAVSACGKAGQWRPALTILRRMRAANCPPNVQTYTAAIDAC----GKAGEWRLAQGLL 240
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M+ + PN++T+N + A + L +++ + P++++Y + A G
Sbjct: 241 AEMR-EKGVAPNVITFNSAISALGNGGQWQEALNLLRDMPSMGVQPNMWSYTAAVTACGD 299
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
N +V +M+S + D ++F ID+ + A++ + + PT+ +
Sbjct: 300 NNRWARALAVHEQMRSRGIRGDEVSFTAAIDACAQGGAWEMALALLDEMRDEGIPPTVRS 359
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
F++ I GK + G+A + ++M + +P+ +++ I G A + D++S
Sbjct: 360 FSTAISACGKGQQWGRAVALLREMEEVGVSPNEVSFNAAIDACGRAGQWRAALSLLDKMS 419
Query: 388 KLGKDMKVSTLNAMLEAYCMNG 409
G T NA++ A C G
Sbjct: 420 SAGVPRGTITYNAVI-AACGKG 440
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 129/310 (41%), Gaps = 16/310 (5%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
GK+ +W L + R M+ + Y+ I GK G+ RLA L +EMR G P+
Sbjct: 193 GKAGQWRPALTILRRMRAAN-CPPNVQTYTAAIDACGKAGEWRLAQGLLAEMREKGVAPN 251
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQV 239
+N+ I+A +AL + M M +PN+ +Y + AC +
Sbjct: 252 VITFNSAISAL----GNGGQWQEALNLLRDMPSMG-VQPNMWSYTAAVTACGDNNRWARA 306
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
A+ +++ + D ++ +DA + G + ++L M+ P + +F+ I +
Sbjct: 307 LAVHEQMRSRGIRGDEVSFTAAIDACAQGGAWEMALALLDEMRDEGIPPTVRSFSTAISA 366
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
GK Q + + + + + P +FN+ I G+A A + KM++
Sbjct: 367 CGKGQQWGRAVALLREMEEVGVSPNEVSFNAAIDACGRAGQWRAALSLLDKMSSAGVPRG 426
Query: 360 FITYECIITMYG----YCDNVSRAREIFDELSKLGKDM------KVSTLNAMLEAYCMNG 409
ITY +I G + VS RE+ +K DM V + +A ++A G
Sbjct: 427 TITYNAVIAACGKGKEWARAVSVLREMLAGQAKTDGDMAPVPMADVVSYSAAIDACVRAG 486
Query: 410 LPTEADLLFE 419
EA L E
Sbjct: 487 EWEEAISLVE 496
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 100/228 (43%), Gaps = 19/228 (8%)
Query: 119 LGKSDKWLQCLEVFRWM-----QKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
LG +W + L + R M Q W Y+ + G + A+ + +MR+
Sbjct: 262 LGNGGQWQEALNLLRDMPSMGVQPNMWS------YTAAVTACGDNNRWARALAVHEQMRS 315
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G R D + A I A + A AL +M+ E P + +++ + AC +
Sbjct: 316 RGIRGDEVSFTAAIDACA----QGGAWEMALALLDEMRD-EGIPPTVRSFSTAISACGKG 370
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ + AL +E+ E ++P+ ++N +DA G+ G + S+L +M S IT+
Sbjct: 371 QQWGRAVALLREMEEVGVSPNEVSFNAAIDACGRAGQWRAALSLLDKMSSAGVPRGTITY 430
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT---LPTFNSMIINYGKA 338
N +I + GK + + + V + ++ + K P + +++Y A
Sbjct: 431 NAVIAACGKGKEWARAVSVLREMLAGQAKTDGDMAPVPMADVVSYSAA 478
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 84/225 (37%), Gaps = 27/225 (12%)
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
D+YTY+ +M A ++G +E+ +L M+S PD F +++ K +++
Sbjct: 68 DVYTYSVLMSAVARSGRWEEVLVLLDVMRSEGVAPDHFAFGAAVNACAKGGQWER----- 122
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
A L +A + +M A+ +P+ T+ + G
Sbjct: 123 ----------------------AVALLDQRALRLLGEMAAVGLSPNVTTFSSAVAACGNA 160
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
RA + D++++ G T +A + A G A + P+ TY
Sbjct: 161 GQWERALGLLDQMAEEGVPPNEFTFSAAVSACGKAGQWRPALTILRRMRAANCPPNVQTY 220
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
A KA L Q LL M + G+ PN F A+ +
Sbjct: 221 TAAIDACGKAGEWRLAQGLLAEMREKGVAPNVITFNSAISALGNG 265
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 146/324 (45%), Gaps = 14/324 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +Y+ ++A GQ A L ++M PD YN LI + ALA
Sbjct: 133 DVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAVL 189
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F++ C P++VTY ILL A + Q L E+H+ APDI TYN V++
Sbjct: 190 EDMFRR-----GCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLN 244
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ G +++ L + S C+P+ +++N+++ + ++ E++ + + H P
Sbjct: 245 GICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPP 304
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ TFN +I + L A V ++M TP+ ++Y ++ + + +A E
Sbjct: 305 NVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFV 364
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM---GVTPDSSTYKLLYKAY 440
+ + G + + N +L A C NG E D+ E H + G +P +Y +
Sbjct: 365 ELMVSRGCYPDIVSYNTLLTALCRNG---EVDVAIELLHQLKDKGCSPVLISYNTVIDGL 421
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
TKA + +LL M G+ P+
Sbjct: 422 TKAGKTKEALELLDEMTSKGLQPD 445
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 152/361 (42%), Gaps = 17/361 (4%)
Query: 120 GKSDKWLQCLE-VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
G++ L LE +FR R + D Y+ L+ K+ + AM L EM + GC P
Sbjct: 180 GRTSNALAVLEDMFR-----RGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAP 234
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
D YN ++ A+ F K C+PN V+YNI+L+ A +
Sbjct: 235 DIVTYNVVLNGICQEGRVEDAME-----FLKNLPSYGCEPNTVSYNIVLKGLFTAERWED 289
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
L +E+ P++ T+N ++ + G+++ VL +M C P+ +++N L+
Sbjct: 290 AEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLH 349
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK--- 355
++ K++ K + + ++ P + ++N+++ + G+ + + + +K
Sbjct: 350 AFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCR---NGEVDVAIELLHQLKDKG 406
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
+P I+Y +I A E+ DE++ G + T + + C EA
Sbjct: 407 CSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAV 466
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
F +MG+ P ++ Y + K L M +G +PN+ + +E
Sbjct: 467 RTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGL 526
Query: 476 S 476
+
Sbjct: 527 A 527
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 137/330 (41%), Gaps = 15/330 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI + +G+T A+ + +M GC PD Y L+ +A K
Sbjct: 165 DAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILL----------EATCKR 214
Query: 204 LGYFQKMKGMER-----CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
GY Q MK ++ C P+IVTYN++L Q V+ K L P+ +Y
Sbjct: 215 SGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSY 274
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N V+ ++ E ++ M C P+++TFN+LI +R + +V + +
Sbjct: 275 NIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQ 334
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
P ++N ++ + K + KA + M + P ++Y ++T V
Sbjct: 335 YGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDV 394
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A E+ +L G + + N +++ G EA L + + G+ PD TY +
Sbjct: 395 AIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIAS 454
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+ + E + +++ GI P +
Sbjct: 455 GLCREDRIEEAVRTFCKVQDMGIRPTAALY 484
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 102/280 (36%), Gaps = 15/280 (5%)
Query: 200 LAKALGYFQKMKGMERCKPNIV--TYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
L AL + G+ P V ++ + CA R D L PD+
Sbjct: 83 LDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGRTADARRVLAAS------GPDVMV 136
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN ++ Y G + +++ M +PD T+N LI R V + +
Sbjct: 137 YNAMVAGYCGAGQLDAARRLVADMPV---EPDAYTYNTLIRGLCGRGRTSNALAVLEDMF 193
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN-- 375
P + T+ ++ K +A + +M P +TY + + G C
Sbjct: 194 RRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYN--VVLNGICQEGR 251
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
V A E L G + + N +L+ +A+ L E + G P+ T+ +
Sbjct: 252 VEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNM 311
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
L + + E ++L++M Q G PN + L F
Sbjct: 312 LISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAF 351
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 151/348 (43%), Gaps = 12/348 (3%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
G+S +W + +EV R M+ Q D Y I G GQ ++ L EM G P+
Sbjct: 296 GRSGRWKEAVEVLRQMESQG-VTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPN 354
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQV 239
+N+ I A K KA+ +++ + P+ ++N + AC ++ +
Sbjct: 355 TIHFNSAIVAC----GKGGQWEKAVELLREVTAL-GLTPDATSFNSAIAACTKSGRWKEA 409
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
L KE+ L PD +YN ++A GK G + + +M + P++I+ N+ I +
Sbjct: 410 LELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRA 469
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
G+R + + ++ + + P + T+NS I GK KA + KM + TP
Sbjct: 470 CGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPD 529
Query: 360 FITYECIITMYGYCDNVSRARE---IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
ITY I C R +E + E+ G V + A ++AY NG A
Sbjct: 530 SITYNSAIAA---CSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVE 586
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L G+TP+ TY + KA + E LLK +++ + P+
Sbjct: 587 LLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPD 634
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 152/341 (44%), Gaps = 6/341 (1%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
KS +W + LE+ + M +R D Y+ I GK GQ +A+ L +M G P+
Sbjct: 402 KSGRWKEALELLKEMPAKR-LKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNV 460
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
N I A R + + + L ++M + PN++TYN ++ C + ++
Sbjct: 461 ISSNIAIRA-CGERGRWQ---EGLELLRQMP-AQGLTPNVITYNSAIKTCGKGGQWEKAL 515
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
L ++ E + PD TYN + A K G KE ++L M PD+I++ ID+Y
Sbjct: 516 DLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAY 575
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
GK +++ ++ + + P + T+NS+I G+ KA + +++ P
Sbjct: 576 GKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDL 635
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
++Y I+ G A ++ E+ G V + + + A G +A L
Sbjct: 636 MSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNL 695
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
GV+P +++Y L +A K +E L++ M Q G+
Sbjct: 696 MGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGL 736
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 158/384 (41%), Gaps = 11/384 (2%)
Query: 96 LVRTLNKYVKVVRSEHCF-LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAV 154
L+R + + V + C+ E G D+W + + R M R + D Y+ I
Sbjct: 166 LLREIPEQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLREM-ADREVVPDEISYNSAIKA 224
Query: 155 MGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KG 212
G+ GQ + L EM + G PD YN++IT K +AL +M KG
Sbjct: 225 CGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGC----GKEGQWKEALSVLTEMSAKG 280
Query: 213 MERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIK 272
+ P ++YN+ +RAC ++ + + +++ + PD+ +Y+ + A G G +
Sbjct: 281 L---TPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWE 337
Query: 273 EMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
+L M P+ I FN I + GK ++K ++ + + P +FNS I
Sbjct: 338 TSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAI 397
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKD 392
K+ +A + ++M A + P I+Y I G A E+ ++ G
Sbjct: 398 AACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLT 457
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
V + N + A G E L G+TP+ TY K K E L
Sbjct: 458 PNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDL 517
Query: 453 LKRMEQNGIVPNKRFFLEALETFS 476
L +M++ + P+ + A+ S
Sbjct: 518 LAKMKELAMTPDSITYNSAIAACS 541
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 150/346 (43%), Gaps = 8/346 (2%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
GK +W + L V M + +T Y+ I G+ G+ + A+ + +M + G PD
Sbjct: 261 GKEGQWKEALSVLTEMSAKG-LTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPD 319
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQV 239
Y+A I A ++ +M G PN + +N + AC + ++
Sbjct: 320 VISYDAAIKAC----GGGGQWETSVDLLDEMAG-RGVAPNTIHFNSAIVACGKGGQWEKA 374
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
L +E+ L PD ++N + A K+G KE +L M + + KPD I++N I++
Sbjct: 375 VELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEA 434
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG-KARLQGKAEYVFQKMTAMKYTP 358
GK ++ ++ + + P + + N I G + R Q E + ++M A TP
Sbjct: 435 CGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLE-LLRQMPAQGLTP 493
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+ ITY I G +A ++ ++ +L T N+ + A G EA L
Sbjct: 494 NVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALL 553
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G+TPD +Y AY K E +LL++M G+ PN
Sbjct: 554 REMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPN 599
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 153/357 (42%), Gaps = 10/357 (2%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
GK +W + +E+ R + D ++ IA K G+ + A+ L EM +PD
Sbjct: 366 GKGGQWEKAVELLREVTALG-LTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPD 424
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVD 237
YN+ I A K AL ++M KG+ PN+++ NI +RAC +
Sbjct: 425 AISYNSAIEAC----GKGGQWEMALELRRQMPTKGL---TPNVISSNIAIRACGERGRWQ 477
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ L +++ L P++ TYN + GK G ++ +L++MK PD IT+N I
Sbjct: 478 EGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAI 537
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+ KR + + + + + P + ++ + I YGK +A + ++M T
Sbjct: 538 AACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLT 597
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P+ ITY +I G +A ++ EL + + + N + A G EA L
Sbjct: 598 PNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDL 657
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
G+TPD +Y +A E LL M +G+ P + A+E
Sbjct: 658 LREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEA 714
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 159/359 (44%), Gaps = 13/359 (3%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
G+ +W + LE+ R + +Q + Y+ I G Q +A+ L EM + PD
Sbjct: 155 GRQGQWEKALELLREIPEQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPD 214
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQV 239
YN+ I A + + +G ++M + P+ +TYN ++ C + +
Sbjct: 215 EISYNSAIKAC----GRGGQWERVIGLLREMPSV-GLTPDAITYNSVITGCGKEGQWKEA 269
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
++ E+ L P+ +YN + A G++G KE VL +M+S PD+I+++ I +
Sbjct: 270 LSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKA 329
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
G ++ + + P FNS I+ GK KA + +++TA+ TP
Sbjct: 330 CGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPD 389
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKL-GKDMKVSTL--NAMLEAYCMNGLPTEADL 416
++ I C R +E + L ++ K +K + N+ +EA C G E L
Sbjct: 390 ATSFNSAIAA---CTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEA-CGKGGQWEMAL 445
Query: 417 -LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
L G+TP+ + + +A + + +LL++M G+ PN + A++T
Sbjct: 446 ELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKT 504
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 136/321 (42%), Gaps = 15/321 (4%)
Query: 159 GQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR-----DKAKALAKALGYFQKMKGM 213
G+ R A+ + EM+ G ++ AH +T + KAL +++
Sbjct: 124 GKWREALGILDEMKEGG----------VVCAHSYTTAITTCGRQGQWEKALELLREIPEQ 173
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
E PN+ YN + AC + +L +E+ + + PD +YN + A G+ G +
Sbjct: 174 EGVSPNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWER 233
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
+ +L M S PD IT+N +I GK + + V + P ++N I
Sbjct: 234 VIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIR 293
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
G++ +A V ++M + TP I+Y+ I G + ++ DE++ G
Sbjct: 294 ACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAP 353
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
N+ + A G +A L +G+TPD++++ A TK+ + +LL
Sbjct: 354 NTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELL 413
Query: 454 KRMEQNGIVPNKRFFLEALET 474
K M + P+ + A+E
Sbjct: 414 KEMPAKRLKPDAISYNSAIEA 434
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 137/311 (44%), Gaps = 31/311 (9%)
Query: 65 RPRSKRGRKSEELESKELVRVLMRSFSDK--EPLVRTLNKYVKVVRSEHCFLLFEELGKS 122
R +RGR E LE L+R + P V T N +K GK
Sbjct: 468 RACGERGRWQEGLE-------LLRQMPAQGLTPNVITYNSAIKTC------------GKG 508
Query: 123 DKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSV 182
+W + L++ M K+ D+ Y+ IA K+G+ + A+ L EM G PD
Sbjct: 509 GQWEKALDLLAKM-KELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVIS 567
Query: 183 YNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVN 240
Y A I A+ K +A+ ++M KG+ PN++TYN +++AC + ++
Sbjct: 568 YTAAIDAY----GKNGQWERAVELLRQMPTKGL---TPNVITYNSVIKACGRGGEWEKAL 620
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
L KEL E+ +APD+ +YN + A GK G +E +L M + PD+I++ I +
Sbjct: 621 DLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRAC 680
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
++K + + PT +++ I GK + +A + ++M +
Sbjct: 681 NAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGLSHRN 740
Query: 361 ITYECIITMYG 371
I+ I+ G
Sbjct: 741 ISNSLIVEALG 751
>gi|414868449|tpg|DAA47006.1| TPA: hypothetical protein ZEAMMB73_127498 [Zea mays]
Length = 870
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 154/348 (44%), Gaps = 51/348 (14%)
Query: 144 DTGI----------YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT 193
DTGI +S LI+ + G AM + M+ +G RP YNA+I A
Sbjct: 233 DTGIAGSYGNTVFAHSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDA---C 289
Query: 194 RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP 253
L LGYF++M C P+ T+N LL AC++A +++ +F E+
Sbjct: 290 GKGGVDLRFTLGYFRQMLQDGLC-PDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGR 348
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD---KME 310
DIYTYN +DA K G + V+ M++N KP+++T++ L+D + K + +D K+
Sbjct: 349 DIYTYNTFVDAICKCGNMGLALQVVLDMEANNAKPNVVTYSTLMDGFSKLEKYDEALKLR 408
Query: 311 QVFKSL--------------MHSK-------------------EKPTLPTFNSMIINYGK 337
+ KSL ++ K EK T+ T+NS+I YGK
Sbjct: 409 EKMKSLRIQLDRVCYNTLLAIYVKTGKYDEIATVCEEMEKLGIEKDTV-TYNSLINGYGK 467
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
++ Q M A PS +TY +I +Y A ++ + + G V
Sbjct: 468 QGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVL 527
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
++ ++ NGL A L + MG+ P+ TY + A+ K+ +
Sbjct: 528 FSSFIDTLAKNGLVECALSLLDEMMKMGIKPNVVTYNTIIDAFGKSKI 575
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 147/351 (41%), Gaps = 26/351 (7%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L FR M Q D ++ L+A + G A +F EM + G D YN +
Sbjct: 300 LGYFRQML-QDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVD 358
Query: 189 AHLHTRDKAKALAKALGYFQKMKGME--RCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
A + AL Q + ME KPN+VTY+ L+ ++ D+ L +++
Sbjct: 359 AICKCGNMGLAL-------QVVLDMEANNAKPNVVTYSTLMDGFSKLEKYDEALKLREKM 411
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
+ D YN ++ Y K G E+ +V M+ + D +T+N LI+ YGK+
Sbjct: 412 KSLRIQLDRVCYNTLLAIYVKTGKYDEIATVCEEMEKLGIEKDTVTYNSLINGYGKQGRL 471
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
D + + + + P++ T++++I Y KA + G A V+ + +
Sbjct: 472 DMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSF 531
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I V A + DE+ K+G V T N +++A+ + + TE D + +MG+
Sbjct: 532 IDTLAKNGLVECALSLLDEMMKMGIKPNVVTYNTIIDAFGKSKIFTEED---SDIGDMGI 588
Query: 427 TPDSSTYKLLY--------KAYTKANMKE-----LVQKLLKRMEQNGIVPN 464
+ ++ T M+ + +L ++M Q G+ PN
Sbjct: 589 VGVYGGQVVRVTNPVIRGGRSATDVRMRRSQELFFILELFQKMVQQGVRPN 639
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 126/309 (40%), Gaps = 13/309 (4%)
Query: 183 YNALITAHLHTRDKAKALAKALGYFQKMK-----------GMERCKPNIV-TYNILLRAC 230
Y AL DK K L A+G KM G+ N V ++ L+ A
Sbjct: 195 YAALPLVGGGAVDKGKLLTAAIGALGKMGRPDLARRAFDTGIAGSYGNTVFAHSALISAY 254
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM-IKEMESVLSRMKSNQCKPD 289
A++ + + + + + L P +YN V+DA GK G+ ++ +M + PD
Sbjct: 255 ARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLRFTLGYFRQMLQDGLCPD 314
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
TFN L+ + + + VF ++H + T+N+ + K G A V
Sbjct: 315 RKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICKCGNMGLALQVVL 374
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
M A P+ +TY ++ + + A ++ +++ L + N +L Y G
Sbjct: 375 DMEANNAKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLRIQLDRVCYNTLLAIYVKTG 434
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFL 469
E + E +G+ D+ TY L Y K ++V L++ M G+ P+ +
Sbjct: 435 KYDEIATVCEEMEKLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYS 494
Query: 470 EALETFSSS 478
++ +S +
Sbjct: 495 TLIDIYSKA 503
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 119/270 (44%), Gaps = 18/270 (6%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT Y+ LI GK+G+ + +L +MR G P Y+ LI + KA A
Sbjct: 454 DTVTYNSLINGYGKQGRLDMVAFLVQDMRAQGVAPSVLTYSTLIDIY----SKAGMHGDA 509
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ K K ++V ++ + A+ V+ +L E+ + + P++ TYN ++D
Sbjct: 510 FNVYLDFK-ESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMMKMGIKPNVVTYNTIID 568
Query: 264 AYGKNGMIKEMESVLSRMK-----SNQC----KPDIITFNLLIDSYGKR-QAFDKMEQVF 313
A+GK+ + E +S + M Q P I D +R Q + ++F
Sbjct: 569 AFGKSKIFTEEDSDIGDMGIVGVYGGQVVRVTNPVIRGGRSATDVRMRRSQELFFILELF 628
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
+ ++ +P + TF++++ + A + +++ + + Y ++ G+
Sbjct: 629 QKMVQQGVRPNVVTFSAILNACSRCNSFEDAALLLEQLRLFDNSVYGVAYGLLM---GHR 685
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
+ S+AR +F++L ++ + NA+ +
Sbjct: 686 EAWSQARSLFNQLGRMDSPTSSAFYNALTD 715
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 158/351 (45%), Gaps = 16/351 (4%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
+ M++Q+ D+ Y LI+ M K+G+ A +F EM G RP +YN LI
Sbjct: 278 ILTTMKRQKIE-PDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGF 336
Query: 191 LHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
+ + L A Y +M KG+ P + TYN L+ A + D+ + KE+ E
Sbjct: 337 CNKGN----LDMASAYKDEMLKKGIS---PTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
++PD TYN +++ Y + K+ + M ++ KP T+ L+ K+ +
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINY-GKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
+ +FK + P FN++I + + ++G E + + M MK P +T+ I
Sbjct: 450 ADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFE-LLKDMDRMKVPPDEVTFNTI- 507
Query: 368 TMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
M G+C V ARE+FDE+ + G + N ++ Y G +A + + G
Sbjct: 508 -MQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG 566
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
P TY L + K +L ++LLK M G+ P+ + +E +
Sbjct: 567 FNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIA 617
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 157/353 (44%), Gaps = 13/353 (3%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
++ ++D+ +C + K++ + + L+++ K +T A L++EM +
Sbjct: 163 DMNRADEAFECF----YTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIK 218
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
+N +I K L KA + M+ KPNIVTYN ++ + V+
Sbjct: 219 SSVYTFNIMINVLC----KEGKLKKAKDFVGHME-TSGVKPNIVTYNTIVHGYCSSGRVE 273
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+A+ + + PD +TY ++ K G ++E + M +P + +N LI
Sbjct: 274 AADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKE-KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
D + + D M +K M K PT+ T+NS+I + +AE + +++
Sbjct: 334 DGFCNKGNLD-MASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGI 392
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
+P ITY +I Y C N +A + DE+ G T ++L EAD
Sbjct: 393 SPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADD 452
Query: 417 LFENSHNMGVTPDSSTYKLLYKAY-TKANMKELVQKLLKRMEQNGIVPNKRFF 468
LF+ + GV PD+ + L + + +N+K + LLK M++ + P++ F
Sbjct: 453 LFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFE-LLKDMDRMKVPPDEVTF 504
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 156/363 (42%), Gaps = 44/363 (12%)
Query: 115 LFEELGKSDK-WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
LF +L +++ W+ E+FR K Y ++ +I V+ K+G+ + A M
Sbjct: 195 LFLKLNRTEAAWVLYAEMFRLRIKSSVYT-----FNIMINVLCKEGKLKKAKDFVGHMET 249
Query: 174 SGCRPDPSVYNALITAH------------LHTRDKAKALAKALGYFQKMKGMERCK---- 217
SG +P+ YN ++ + L T + K + Y + GM CK
Sbjct: 250 SGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGM--CKQGRL 307
Query: 218 ----------------PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
P+ V YN L+ N+D +A E+ + ++P + TYN +
Sbjct: 308 EEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSL 367
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ A E E ++ ++ PD IT+N+LI+ Y + K + ++ S
Sbjct: 368 IHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGI 427
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRA 379
KPT T+ S++ K +A+ +F+K+T+ P I + +I G+C NV A
Sbjct: 428 KPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALID--GHCSNSNVKGA 485
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
E+ ++ ++ T N +++ +C G EA LF+ G+ PD ++ L
Sbjct: 486 FELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISG 545
Query: 440 YTK 442
Y++
Sbjct: 546 YSR 548
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 125/273 (45%), Gaps = 7/273 (2%)
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
Y K KG+ P I T N LL + + L+ E+ + +YT+N +++
Sbjct: 175 YTMKEKGV---LPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVL 231
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G +K+ + + M+++ KP+I+T+N ++ Y + + + ++ K +P
Sbjct: 232 CKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDS 291
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRAREIF 383
T+ S+I K +A +F++M PS + Y +I G+C+ N+ A
Sbjct: 292 FTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLID--GFCNKGNLDMASAYK 349
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
DE+ K G +ST N+++ A M EA+ + + G++PD+ TY +L Y +
Sbjct: 350 DEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRC 409
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+ L M +GI P K+ + L S
Sbjct: 410 ANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLS 442
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 76/185 (41%)
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
I F+ LI S D+ + F ++ PT+ T NS++ + K A ++ +
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M ++ S T+ +I + + +A++ + G + T N ++ YC +G
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
AD + + PDS TY L K E K+ + M Q G+ P+ +
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNT 331
Query: 471 ALETF 475
++ F
Sbjct: 332 LIDGF 336
>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
Length = 414
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 144/323 (44%), Gaps = 6/323 (1%)
Query: 133 RWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH 192
RW+Q R Y D ++ +I + + GQ + A+ L M GC PD +N L+
Sbjct: 71 RWIQ-DRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCR 129
Query: 193 TRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILA 252
T + +++ ++++ C PN+VT+ ++ +A ++ A++ ++ S +
Sbjct: 130 TNE----VSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIM 185
Query: 253 PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
P+ TYN +++ YGK G + V +M +C PD++TF+ LID Y + D ++
Sbjct: 186 PNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRI 245
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM-KYTPSFITYECIITMYG 371
+ + + +P + TF+ +I + K +A + ++ P Y +I +
Sbjct: 246 WSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLC 305
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
C V A I + + G T ++ YCM +EA + F G +PDS
Sbjct: 306 KCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSI 365
Query: 432 TYKLLYKAYTKANMKELVQKLLK 454
T KA M V +++
Sbjct: 366 TVNCFISCLLKAGMPNEVDHVMR 388
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 136/301 (45%), Gaps = 6/301 (1%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
L S+ GCR + YN L+++ L R + + F++ P++ ++N++
Sbjct: 33 LLSKASEFGCRVEAYAYNKLMSS-LIGRGRVH---DVVALFERWIQDRVYSPDVWSFNVV 88
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ- 285
++ + V + L + ++E +PD T+N ++D + + VL R++ +
Sbjct: 89 IKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGV 148
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
C P+++TF +I Y K + V+ ++ S P T+N +I YGK G A
Sbjct: 149 CMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAV 208
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
V+Q+MT ++ P +T+ +I Y C + A I+ ++++ V T + ++ +
Sbjct: 209 EVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSL 268
Query: 406 CMNGLPTEA-DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
C EA LL E + + P + Y + K + + K ME+ G P+
Sbjct: 269 CKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPD 328
Query: 465 K 465
K
Sbjct: 329 K 329
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/254 (19%), Positives = 99/254 (38%), Gaps = 35/254 (13%)
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKE-LHESILAPDIYTYNGVMDAYGKNGMIKEM 274
C+ YN L+ + V V ALF+ + + + +PD++++N V+ + G +++
Sbjct: 42 CRVEAYAYNKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKA 101
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
++ RM C PD +T N+L+D + + +V +
Sbjct: 102 LELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLR-------------------- 141
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
RLQ + P+ +T+ +I+ Y + A +++++ G
Sbjct: 142 ----RLQRDGVCM----------PNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPN 187
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
T N ++ Y G A +++ + PD T+ L Y + + ++
Sbjct: 188 TVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWS 247
Query: 455 RMEQNGIVPNKRFF 468
M Q+ I PN F
Sbjct: 248 DMAQHRIQPNVYTF 261
>gi|302819880|ref|XP_002991609.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
gi|300140642|gb|EFJ07363.1| hypothetical protein SELMODRAFT_133813 [Selaginella moellendorffii]
Length = 356
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 140/293 (47%), Gaps = 7/293 (2%)
Query: 183 YNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL 242
YNA+I A+ +AK A + +M E P+ VTY+IL+ +N ++ L
Sbjct: 33 YNAMIAAYY----QAKRPKDAWDVYHQMLA-EGIDPDEVTYDILV--SGSGKNGYPIDRL 85
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
F E+ +A + +YN V+ A+ K G I ++E V+ M + +PD+ +FN LI +Y
Sbjct: 86 FLEIKSRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAAYAM 145
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ ++ QVF ++ + P + T+ ++I + ++ + +A +F++M K P F
Sbjct: 146 SRKPERGLQVFSNMKAAGVLPDIVTYTTLIQMFSRSSMHKEAIEMFEEMVVNKCQPDFFV 205
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y ++++YG V+ A IF L G + T +++ A+ GL E+ F
Sbjct: 206 YSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEESRKHFSQME 265
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
G D + AY KA M LL R+ G+ PN+ + +E F
Sbjct: 266 AYGCRADVHLLNTMIDAYAKAGMVNDAANLLHRLTAQGVCPNRASYAIIVEGF 318
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 155/321 (48%), Gaps = 15/321 (4%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E+F+W++ Q W Y+ +IA + + + A ++ +M G PD Y+ L++
Sbjct: 17 ELFQWIKLQDW--DKLRPYNAMIAAYYQAKRPKDAWDVYHQMLAEGIDPDEVTYDILVSG 74
Query: 190 ---HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
+ + D+ K+ G ++ +YN+++ A + ++D+V + +E+
Sbjct: 75 SGKNGYPIDRLFLEIKSRGVALTLR----------SYNVVICAFTKEGSIDKVEEVIREM 124
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
L PD++++N ++ AY + + V S MK+ PDI+T+ LI + +
Sbjct: 125 IRQELRPDLFSFNALIAAYAMSRKPERGLQVFSNMKAAGVLPDIVTYTTLIQMFSRSSMH 184
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ ++F+ ++ +K +P ++ ++ YGKA L A +F ++ + P+ +TY +
Sbjct: 185 KEAIEMFEEMVVNKCQPDFFVYSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSL 244
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I+ + + + +R+ F ++ G V LN M++AY G+ +A L GV
Sbjct: 245 ISAHLHKGLLEESRKHFSQMEAYGCRADVHLLNTMIDAYAKAGMVNDAANLLHRLTAQGV 304
Query: 427 TPDSSTYKLLYKAYTKANMKE 447
P+ ++Y ++ + + A E
Sbjct: 305 CPNRASYAIIVEGFLHAGHVE 325
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 2/154 (1%)
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
L +N+MI Y +A+ A V+ +M A P +TY+ +++ G N +F
Sbjct: 30 LRPYNAMIAAYYQAKRPKDAWDVYHQMLAEGIDPDEVTYDILVS--GSGKNGYPIDRLFL 87
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E+ G + + + N ++ A+ G + + + + PD ++ L AY +
Sbjct: 88 EIKSRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAAYAMSR 147
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
E ++ M+ G++P+ + ++ FS S
Sbjct: 148 KPERGLQVFSNMKAAGVLPDIVTYTTLIQMFSRS 181
>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 150/338 (44%), Gaps = 10/338 (2%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E++ M + DT YS LI+ GK + A+ LF EM+ +G +P +Y L+
Sbjct: 216 ELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGI 275
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ K + +AL +M+ M RC P + TY L+R ++ V+ ++K + +
Sbjct: 276 YF----KLGKVEEALNLVHEMR-MRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKD 330
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
PD+ N +++ G++ +KE + M+ C P+++T+N +I S + +A
Sbjct: 331 GCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKA--PP 388
Query: 310 EQVFKSLMHSKEKPTLP---TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ L K+ +P T++ +I + K KA + ++M + P Y +
Sbjct: 389 SEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSL 448
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I G A E+F EL + V M++ + G EA LF +G
Sbjct: 449 INSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGC 508
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
PD Y L +A+M + L + ME+NG P+
Sbjct: 509 IPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPD 546
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 151/340 (44%), Gaps = 13/340 (3%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLA--MW-LFSEMRNSGCRPDPSVYNA 185
++ F+W K+R + D+ Y LI + + RL +W +M S C PS +
Sbjct: 109 IQFFKWAGKKRNFEHDSTTYMALIRCL---DENRLVGELWRTIQDMVKSPCAIGPSELSE 165
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
++ + K + KAL F ++KG +C+P TYN ++ Q + ++V+ L+ E
Sbjct: 166 IV----KILGRVKMVNKALSIFYQVKG-RKCRPTAGTYNSVILMLMQEGHHEKVHELYNE 220
Query: 246 L-HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
+ E PD TY+ ++ A+GK + MK N +P + L+ Y K
Sbjct: 221 MCSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLG 280
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
++ + + + PT+ T+ +I GK+ A V++ M P +
Sbjct: 281 KVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMN 340
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN-GLPTEADLLFENSHN 423
+I + G D + A E+F+E+ L V T N ++++ + P+EA E
Sbjct: 341 NLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKK 400
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
GV P S TY +L + K N E LL+ M++ G P
Sbjct: 401 DGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPP 440
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 115/248 (46%), Gaps = 9/248 (3%)
Query: 130 EVFRWMQ--KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
E W++ K+ + + YS LI K + A+ L EM G P P+ Y +LI
Sbjct: 390 EASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLI 449
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV-TYNILLRACAQARNVDQVNALFKEL 246
++ KAK A FQ++K E C + V Y ++++ + ++ LF E+
Sbjct: 450 ----NSLGKAKRYEAANELFQELK--ENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEM 503
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
+ PD+Y YN ++ + M+ E S+ M+ N C PDI + N++++ +
Sbjct: 504 KKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGP 563
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ ++F + S KP ++N+++ +A L +A + ++M + + ITY I
Sbjct: 564 KRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSI 623
Query: 367 ITMYGYCD 374
+ G D
Sbjct: 624 LEAVGKVD 631
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 149/348 (42%), Gaps = 14/348 (4%)
Query: 97 VRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMG 156
V T+ Y +++R LGKS + V++ M K D + + LI ++G
Sbjct: 298 VPTVYTYTELIRG---------LGKSGRVEDAYGVYKNMLKDGCK-PDVVLMNNLINILG 347
Query: 157 KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERC 216
+ + + A+ LF EMR C P+ YN +I + DKA ++A + ++MK +
Sbjct: 348 RSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFE--DKAPP-SEASSWLERMKK-DGV 403
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
P+ TY+IL+ + V++ L +E+ E P Y ++++ GK +
Sbjct: 404 VPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANE 463
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+ +K N + + ++I +GK F++ +F + P + +N++I
Sbjct: 464 LFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMV 523
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
+A + +A +F+ M P ++ I+ RA E+F ++
Sbjct: 524 RADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAV 583
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ N +L GL EA L + ++ G D TY + +A K +
Sbjct: 584 SYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEAVGKVD 631
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 113/281 (40%), Gaps = 39/281 (13%)
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
TY L+R + R V ++ +++ +S A + ++ G+ M+ + S+ ++
Sbjct: 127 TYMALIRCLDENRLVGELWRTIQDMVKSPCAIGPSELSEIVKILGRVKMVNKALSIFYQV 186
Query: 282 KSNQCKPD------------------------------------IITFNLLIDSYGKRQA 305
K +C+P +T++ LI ++GK
Sbjct: 187 KGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNR 246
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
D ++F + + +PT + +++ Y K +A + +M + P+ TY
Sbjct: 247 DDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTE 306
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+I G V A ++ + K G V +N ++ + EA LFE +
Sbjct: 307 LIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLN 366
Query: 426 VTPDSSTYKLLYKAY--TKANMKELVQKLLKRMEQNGIVPN 464
TP+ TY + K+ KA E L+RM+++G+VP+
Sbjct: 367 CTPNVVTYNTIIKSLFEDKAPPSE-ASSWLERMKKDGVVPS 406
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 86/212 (40%), Gaps = 1/212 (0%)
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
D TY ++ +N ++ E+ + M + C + ++ G+ + +K +F
Sbjct: 124 DSTTYMALIRCLDENRLVGELWRTIQDMVKSPCAIGPSELSEIVKILGRVKMVNKALSIF 183
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT-PSFITYECIITMYGY 372
+ K +PT T+NS+I+ + K ++ +M + + P +TY +I+ +G
Sbjct: 184 YQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGK 243
Query: 373 CDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
+ A +FDE+ + G ++ Y G EA L P T
Sbjct: 244 LNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYT 303
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y L + K+ E + K M ++G P+
Sbjct: 304 YTELIRGLGKSGRVEDAYGVYKNMLKDGCKPD 335
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 166/373 (44%), Gaps = 22/373 (5%)
Query: 94 EPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIA 153
EP T N +V HC L ++ L+V M Q + D Y+ +I
Sbjct: 297 EPDQVTYNTFV------HC------LCQNGHVSHALKVMDLML-QEGHDPDVFTYNTVIN 343
Query: 154 VMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALGYFQKMK 211
+ K G+ A + ++M + GC PD + +N LI A ++A LA+ L +K
Sbjct: 344 CLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLAREL----TVK 399
Query: 212 GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMI 271
G+ P++ T+NIL+ A + + LF+E+ S APD TYN ++D G +
Sbjct: 400 GL---SPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKL 456
Query: 272 KEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM 331
+L M+SN C +T+N +ID+ K+ ++ E+VF + + TFN++
Sbjct: 457 VNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTL 516
Query: 332 IINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGK 391
I KA+ A + ++M PS ITY I+T Y ++ +A +I + ++ G
Sbjct: 517 IDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGF 576
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
++ V T ++ C G A L G+ P Y + ++ + N
Sbjct: 577 EIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALS 636
Query: 452 LLKRMEQNGIVPN 464
L + M + G P+
Sbjct: 637 LFREMTEVGEPPD 649
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 164/349 (46%), Gaps = 23/349 (6%)
Query: 130 EVFRWMQKQ--RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
+ ++QK+ + D Y+ + + + G A+ + M G PD YN +I
Sbjct: 283 DALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVI 342
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRA-CAQARNVDQVNALFKE 245
+ K L +A G +M ++R C P+ T+N L+ A C+Q R +++ L +E
Sbjct: 343 ----NCLSKNGELDEAKGIVNQM--VDRGCLPDTTTFNTLIVALCSQNR-LEEALDLARE 395
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID---SYGK 302
L L+PD+YT+N +++A K G + MKS+ C PD +T+N+LID S GK
Sbjct: 396 LTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGK 455
Query: 303 R-QAFDKMEQVFKSLMHSKEKP-TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
A D +++ M S P + T+N++I K +AE VF +M A + S
Sbjct: 456 LVNALDLLKE-----MESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSA 510
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG-LPTEADLLFE 419
+T+ +I + A E+ +++ K G T N++L YC G L AD+L
Sbjct: 511 VTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILET 570
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+ N G D TY L KA ++ KLL+ M GI P + +
Sbjct: 571 MTAN-GFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAY 618
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 138/306 (45%), Gaps = 8/306 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++ LI + K G L + LF EM++SGC PD YN LI HL + K L A
Sbjct: 404 DVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILID-HLCSMGK---LVNA 459
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L ++M+ C + VTYN ++ A + +++ +F ++ ++ T+N ++D
Sbjct: 460 LDLLKEMES-NGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLID 518
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K I + ++ +M +P IT+N ++ Y K+ K + +++ + +
Sbjct: 519 GLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEI 578
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T+ ++I KA A + + M P+ Y +I +N+ A +F
Sbjct: 579 DVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLF 638
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEA--DLLFENSHNMGVTPDSSTYKLLYKAYT 441
E++++G+ T + C G P + D L E N G P+ S++++L +
Sbjct: 639 REMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMV-NKGFMPEFSSFRMLAEGLL 697
Query: 442 KANMKE 447
M +
Sbjct: 698 NLGMDD 703
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 143/320 (44%), Gaps = 9/320 (2%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
ADT +Y+ L+ V+ + + +L +++EM + G +PD N LI A +A +
Sbjct: 158 ADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALC----RAHQVRT 213
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A+ ++M P+ T+ L++ + +++ + ++ E+ +P T N ++
Sbjct: 214 AVLMLEEMSS-HAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLI 272
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+ Y K G +++ + + ++ +PD +T+N + + +V ++
Sbjct: 273 NGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHD 332
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P + T+N++I K +A+ + +M P T+ +I + + A ++
Sbjct: 333 PDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDL 392
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
EL+ G V T N ++ A C G P LFE + G PD TY +L
Sbjct: 393 ARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHL-- 450
Query: 443 ANMKELVQ--KLLKRMEQNG 460
+M +LV LLK ME NG
Sbjct: 451 CSMGKLVNALDLLKEMESNG 470
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 135/327 (41%), Gaps = 12/327 (3%)
Query: 146 GIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR---DKAKALAK 202
+Y ++I +G G L L EMR G V + + ++ R D +
Sbjct: 90 AVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRN 149
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
L F + + YN LL A+ + + +++ E+ + + PD+ T N ++
Sbjct: 150 QLNTFG-------VQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLI 202
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
A + ++ +L M S+ PD TF L+ + + + + +V +M +
Sbjct: 203 KALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCS 262
Query: 323 PTLPTFNSMIINYGK-ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
PT T N +I Y K R++ Y+ QK A + P +TY + +VS A +
Sbjct: 263 PTRVTVNVLINGYCKMGRVEDALGYI-QKEIADGFEPDQVTYNTFVHCLCQNGHVSHALK 321
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ D + + G D V T N ++ NG EA + + G PD++T+ L A
Sbjct: 322 VMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALC 381
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFF 468
N E L + + G+ P+ F
Sbjct: 382 SQNRLEEALDLARELTVKGLSPDVYTF 408
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/179 (18%), Positives = 69/179 (38%), Gaps = 1/179 (0%)
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR-LQGKAEY 346
P + +I G AFD ME + + + + S + +Y + R +
Sbjct: 87 PSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDL 146
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
V ++ Y ++ + + +++E++ G V TLN +++A C
Sbjct: 147 VRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALC 206
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
A L+ E + V PD +T+ L + + + E ++ +M + G P +
Sbjct: 207 RAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTR 265
>gi|410110067|gb|AFV61113.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
herrerae]
Length = 433
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 143/308 (46%), Gaps = 7/308 (2%)
Query: 134 WMQK--QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
W+QK Q D +YS LI + K A+ +FS ++ SG PD YNA+I
Sbjct: 34 WLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINVF- 92
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KAK +A +MK PN +Y+ LL + + + ++F E+ E
Sbjct: 93 ---GKAKLFREARALISEMK-TAGVMPNTASYSTLLTMYVENKKFIEALSVFSEMREIKC 148
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
D+ T N ++D YG+ GM KE + + M+ +P+++++N L+ YG + F +
Sbjct: 149 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 208
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+F+ + + + T+NSM++ YGK KA + Q+M P+ ITY II+++G
Sbjct: 209 LFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWG 268
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ RA +F +L G ++ M+ AY GL A L + P +
Sbjct: 269 KVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKSPDNIPRDT 328
Query: 432 TYKLLYKA 439
+L A
Sbjct: 329 AIHILAGA 336
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 153/327 (46%), Gaps = 5/327 (1%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
++R D YS LI GK+G A+ +M D +Y+ LI D
Sbjct: 4 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 63
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+KA++ F ++K P++V YN ++ +A+ + AL E+ + + P+
Sbjct: 64 SKAIS----IFSRLK-RSGFMPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTA 118
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+Y+ ++ Y +N E SV S M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 119 SYSTLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 178
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P + ++N+++ YG A L G+A ++F+ M + +TY ++ +YG
Sbjct: 179 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEH 238
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A + E+ G + T + ++ + G A +LF+ + GV D Y+ +
Sbjct: 239 EKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTM 298
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVP 463
AY +A + ++LL ++ +P
Sbjct: 299 IVAYERAGLVAHAKRLLHELKSPDNIP 325
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 137/293 (46%), Gaps = 5/293 (1%)
Query: 169 SEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLR 228
EMR PD Y+ LIT H K AL + QKM+ +R ++V Y+ L+
Sbjct: 1 DEMRERALSPDRYTYSTLIT-HF---GKEGLFDAALSWLQKME-QDRVPGDLVLYSNLIE 55
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
+ + + ++F L S PD+ YN +++ +GK + +E +++S MK+ P
Sbjct: 56 LSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMP 115
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
+ +++ L+ Y + + F + VF + K L T N MI YG+ + +A+ +F
Sbjct: 116 NTASYSTLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 175
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
M M P+ ++Y ++ +YG + A +F + + + V T N+M+ Y
Sbjct: 176 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKT 235
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+A+ L + N G+ P+S TY + + K + L +++ +G+
Sbjct: 236 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 288
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 109/220 (49%)
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
E+ E L+PD YTY+ ++ +GK G+ S L +M+ ++ D++ ++ LI+ K
Sbjct: 2 EMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLC 61
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
+ K +F L S P L +N+MI +GKA+L +A + +M P+ +Y
Sbjct: 62 DYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTASYS 121
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
++TMY A +F E+ ++ + ++T N M++ Y G+ EAD LF M
Sbjct: 122 TLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 181
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G+ P+ +Y L + Y A + L + M++ I N
Sbjct: 182 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 221
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 152/360 (42%), Gaps = 42/360 (11%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ ++ D Y+ +I V GK R A L SEM+ +G P+ + Y+ L+T ++
Sbjct: 74 KRSGFMPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTASYSTLLTMYVEN--- 130
Query: 197 AKALAKALGYFQKMK--------------------------------GMER--CKPNIVT 222
K +AL F +M+ GM + +PN+V+
Sbjct: 131 -KKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 189
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
YN LLR A + LF+ + + ++ TYN +M YGK ++ +++ M+
Sbjct: 190 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQ 249
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
+ +P+ IT++ +I +GK D+ +F+ L S + + +MI+ Y +A L
Sbjct: 250 NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVA 309
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
A+ + ++ +P I + I + + A +F + G+ ++ M+
Sbjct: 310 HAKRLLHELK----SPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMI 365
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+ +F+ +G PDS+ L+ AY K + + + M++ G +
Sbjct: 366 HLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHELDKANDVYMEMQEVGCI 425
>gi|357502615|ref|XP_003621596.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496611|gb|AES77814.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 177/415 (42%), Gaps = 12/415 (2%)
Query: 66 PRSKRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKY-VKVVRSEHCFLLFEELGKSDK 124
PR + + + E + L + ++ + L Y ++ E + +E G +
Sbjct: 97 PRVTPNKHAHSAAADEALSYLFNAGNNIAAIDNVLIAYESELWEVEDYIYMLKEFGNTGH 156
Query: 125 WL---QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
+L +C + W Q R IA + S +I +G+ G+ A+ LF R G
Sbjct: 157 FLLATKCFDFIIWKQNGR--IAKGKLVSTMIGTLGRLGEINHALRLFESARLEGHGNTVY 214
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR-NVDQVN 240
++A+I+A+ + + A+ F+ M+ PN+++YN L+ A A+ + D V
Sbjct: 215 SFSAMISAY----GRNGHFSDAVDLFRSMRSWG-VYPNLISYNSLIDAGAKGEVDFDVVV 269
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
F E+ + PD TYN ++ GM + + +LS M D T+N +D+
Sbjct: 270 KFFDEMLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTL 329
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
K D +V + + + PT+ T+++MI KA L A ++++M +
Sbjct: 330 CKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSISVDR 389
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
++Y ++ +Y A E+ G V T NA+L Y G+ E LFE
Sbjct: 390 VSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEE 449
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ P++ TY + YTK M + + K ++ + + F+ +++
Sbjct: 450 MKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSIIDSL 504
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 158/389 (40%), Gaps = 51/389 (13%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+S +I+ G+ G A+ LF MR+ G P+ YN+LI A + K +F
Sbjct: 216 FSAMISAYGRNGHFSDAVDLFRSMRSWGVYPNLISYNSLIDAGAKGEVDFDVVVK---FF 272
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M E P+ +TYN LL CA + L E+ + + D +TYN +D K
Sbjct: 273 DEMLA-EGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCK 331
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK----------------------RQA 305
G I VL M S + P ++T++ +ID K R +
Sbjct: 332 GGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSISVDRVS 391
Query: 306 FDKMEQVFKSLMHSKE-------------KPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
++ M ++ L E K + T+N+++ YG+ + + +F++M
Sbjct: 392 YNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMK 451
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
A P+ +TY +I +Y A +++ + K ++ V +++++ C NGL
Sbjct: 452 AWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSIIDSLCKNGLVE 511
Query: 413 EADLLFENSHNMGVTPDSSTYK-----------LLYKAYTKANMKELVQKLLKRMEQNGI 461
+ +L G+ P+ T+ L Y + + E + L M +G
Sbjct: 512 SSIMLLIAMIEKGIKPNVVTFNSIIDASRQSPTLEYGVHGSSQAVEYPTEQLSSMLIDGA 571
Query: 462 VPNKRFFLEALETFSSSLAGSQSGSAKTD 490
NK L+ F LA ++G + D
Sbjct: 572 FQNKTGDDRILKMF-EQLAAEKAGHREKD 599
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 137/322 (42%), Gaps = 41/322 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH--LHTRDKAKALAKALG 205
Y+ ++ + K G+ A+ EM + G + D YNAL++ + D+ + L
Sbjct: 392 YNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRL----- 446
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
F++MK PN +TY+ ++ + + ++K+ ++ L D+ Y ++D+
Sbjct: 447 -FEEMKAWN-IYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSIIDSL 504
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS-----------YGKRQAFDKMEQVFK 314
KNG+++ +L M KP+++TFN +ID+ +G QA + +
Sbjct: 505 CKNGLVESSIMLLIAMIEKGIKPNVVTFNSIIDASRQSPTLEYGVHGSSQAVEYPTEQLS 564
Query: 315 SLM-------HSKEKPTLPTFNSMIINYGKAR---LQGKAE-----YVFQKMTAMKYTPS 359
S++ + + L F + R +G+ + ++FQKM + P+
Sbjct: 565 SMLIDGAFQNKTGDDRILKMFEQLAAEKAGHREKDRKGRQDQHCILWLFQKMHELNIKPN 624
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
+T+ I+ C++ A + L +L + + +L Y + +A LF+
Sbjct: 625 VVTFSAILNACSRCNSFEDASMLLGAL-RLFDNQVYGVTHGLLMGY-REQVWFQAQTLFD 682
Query: 420 NSHNMGVTPDSSTYKLLYKAYT 441
M DSST Y A T
Sbjct: 683 EMRRM----DSSTASAFYNALT 700
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 155/344 (45%), Gaps = 15/344 (4%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR---DKA 197
Y D Y+ +I + K + A F E+ G RP+ Y AL+ ++ D A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+ L+ + ++ PN++TY+ LL A + V + LF+E+ + PDI T
Sbjct: 246 RLLSDMIK--------KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y+ +++ + I E + M S C D++++N LI+ + K + + ++F+ +
Sbjct: 298 YSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN-- 375
T+N++I + +A KA+ F +M +P TY I + G CDN
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN--ILLGGLCDNGE 415
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+ +A IF+++ K D+ + T ++ C G EA LF + G+ PD TY
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 475
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSL 479
+ + V+ L +M+Q G++ N + T S+ L
Sbjct: 476 MMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAEL 519
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 141/303 (46%), Gaps = 9/303 (2%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIV 221
A+ L +M G +PD YNA+I + T K + A +F+++ KG+ +PN+V
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKT----KRVNDAFDFFKEIERKGI---RPNVV 226
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
TY L+ + L ++ + + P++ TY+ ++DA+ KNG + E + + M
Sbjct: 227 TYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
PDI+T++ L++ D+ Q+F ++ + ++N++I + KA+
Sbjct: 287 VRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRV 346
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
+F++M+ + +TY +I + +V +A+E F ++ G + T N +
Sbjct: 347 EDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 406
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
L C NG +A ++FE+ + D TY + + K E L + G+
Sbjct: 407 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466
Query: 462 VPN 464
P+
Sbjct: 467 KPD 469
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 144/303 (47%), Gaps = 9/303 (2%)
Query: 164 AMWLFSEMRNSGCRPDPSV--YNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV 221
A+ LFS+M S RP PS+ +N L++A + K + +LG ++ G+ + ++
Sbjct: 69 AIDLFSDMVKS--RPFPSIVDFNRLLSAIVKL--KKYDVVISLGKKMEVLGI---RNDLY 121
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
T+NI++ V ++ ++ + PD T +++ + + + + S++ +M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
KPDI+ +N +IDS K + + FK + +P + T+ +++ +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
A + M K TP+ ITY ++ + V A+E+F+E+ ++ D + T +++
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ C++ EA+ +F+ + G D +Y L + KA E KL + M Q G+
Sbjct: 302 VNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 462 VPN 464
V N
Sbjct: 362 VSN 364
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 109/239 (45%), Gaps = 10/239 (4%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + K+ K L+ E+F M + D YS L+ + + A +F M +
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMS-IDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSK 324
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQ 232
GC D YN LI KAK + + F++M +G+ N VTYN L++ Q
Sbjct: 325 GCLADVVSYNTLINGFC----KAKRVEDGMKLFREMSQRGLV---SNTVTYNTLIQGFFQ 377
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
A +VD+ F ++ ++PDI+TYN ++ NG +++ + M+ + DI+T
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 437
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
+ +I K ++ +F SL KP + T+ +M+ L + E ++ KM
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 114/263 (43%), Gaps = 16/263 (6%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L S +W + M K++ + YS L+ K G+ A LF EM
Sbjct: 231 LVNGLCNSSRWSDAARLLSDMIKKK-ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 289
Query: 175 GCRPDPSVYNALITA-HLHTR-DKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRAC 230
PD Y++L+ LH R D+A + F M KG C ++V+YN L+
Sbjct: 290 SIDPDIVTYSSLVNGLCLHDRIDEANQM------FDLMVSKG---CLADVVSYNTLINGF 340
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
+A+ V+ LF+E+ + L + TYN ++ + + G + + + S+M PDI
Sbjct: 341 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
T+N+L+ +K +F+ + + + T+ ++I K +A +F
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 460
Query: 351 MTAMKYTPSFITYECIITMYGYC 373
++ P +TY + M G C
Sbjct: 461 LSLKGLKPDIVTYTTM--MSGLC 481
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 82/190 (43%), Gaps = 4/190 (2%)
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P I+ FN L+ + K + +D + + K + + L TFN +I + A +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 348 FQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
KM + Y P +T ++ G+C + VS A + D++ ++G + NA++++
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVN--GFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSL 200
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
C +A F+ G+ P+ TY L ++ +LL M + I PN
Sbjct: 201 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV 260
Query: 466 RFFLEALETF 475
+ L+ F
Sbjct: 261 ITYSALLDAF 270
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 78/186 (41%), Gaps = 7/186 (3%)
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+F ++ S+ P++ FN ++ K + + +KM + T+ +I +
Sbjct: 71 DLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCF 130
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
C VS A I ++ KLG + T+ +++ +C ++A L + +G PD
Sbjct: 131 CCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDI 190
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTD 490
Y + + K K +E+ GI PN + T+++ + G + S +D
Sbjct: 191 VAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN-------VVTYTALVNGLCNSSRWSD 243
Query: 491 LTRSLS 496
R LS
Sbjct: 244 AARLLS 249
>gi|242064536|ref|XP_002453557.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
gi|241933388|gb|EES06533.1| hypothetical protein SORBIDRAFT_04g008050 [Sorghum bicolor]
Length = 390
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 148/332 (44%), Gaps = 29/332 (8%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT-----AHLHTRDK------ 196
Y+ +I +GK A+++ S+M S C+P+ Y+ ++ LH ++
Sbjct: 48 YNTVIEALGKNKMVDKAIFMLSKMIESDCQPNQFTYSIMLDVLATGGQLHRLNEILDICS 107
Query: 197 -----------AKALAK------ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQV 239
KAL K A F +M K + + +L A A +
Sbjct: 108 GHLNRSVYSYLVKALCKSGHASEAHSVFCRMWSSHE-KGDRDAFVSMLEALCNAEKTAEA 166
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
L + E + D+ YN + A GK + M S+ +MK+N PD+ T+N++I S
Sbjct: 167 IDLLHMMPEKGITTDVGMYNIIFSALGKLKQVSFMSSLYDKMKANGVAPDVFTYNIMISS 226
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
+G+ DK ++F+ + S KP + T+NSMI GK +A +F+ M Y P
Sbjct: 227 FGRVGLVDKASELFEEMDDSSCKPDVITYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPD 286
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
TY +I +G + V A +FDE+ G + T N +L+ +G EA L+E
Sbjct: 287 VFTYSILIECFGKSNKVDMACSLFDEMIAQGCVPNIVTYNILLDCLERHGKTREAHKLYE 346
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
G+ PDS TY +L + +++ ++K
Sbjct: 347 TLKQQGLAPDSITYSILERLESRSQRTARIRK 378
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 148/340 (43%), Gaps = 11/340 (3%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
KQ D Y+ LI + GK G+ + EM + GC + YN +I A K
Sbjct: 2 KQNNCDPDAYTYTILIRMSGKAGKATKFVSFLEEMVSKGCVLNLIAYNTVIEA----LGK 57
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
K + KA+ KM + C+PN TY+I+L A + ++N + ++ L +Y
Sbjct: 58 NKMVDKAIFMLSKMIESD-CQPNQFTYSIMLDVLATGGQLHRLNEIL-DICSGHLNRSVY 115
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+Y ++ A K+G E SV RM S+ K D F ++++ + + + +
Sbjct: 116 SY--LVKALCKSGHASEAHSVFCRMWSSHEKGDRDAFVSMLEALCNAEKTAEAIDLLHMM 173
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+ +N + GK + ++ KM A P TY +I+ +G V
Sbjct: 174 PEKGITTDVGMYNIIFSALGKLKQVSFMSSLYDKMKANGVAPDVFTYNIMISSFGRVGLV 233
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A E+F+E+ V T N+M+ NG EA +LF++ G PD TY +L
Sbjct: 234 DKASELFEEMDDSSCKPDVITYNSMINCLGKNGDLDEAHMLFKDMQEKGYDPDVFTYSIL 293
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPN---KRFFLEALE 473
+ + K+N ++ L M G VPN L+ LE
Sbjct: 294 IECFGKSNKVDMACSLFDEMIAQGCVPNIVTYNILLDCLE 333
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 80/216 (37%), Gaps = 32/216 (14%)
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
MK N C PD T+ +LI GK K + ++ L +N++I GK ++
Sbjct: 1 MKQNNCDPDAYTYTILIRMSGKAGKATKFVSFLEEMVSKGCVLNLIAYNTVIEALGKNKM 60
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD---------------- 384
KA ++ KM P+ TY ++ + + R EI D
Sbjct: 61 VDKAIFMLSKMIESDCQPNQFTYSIMLDVLATGGQLHRLNEILDICSGHLNRSVYSYLVK 120
Query: 385 ELSKLGKDMKVSTL----------------NAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
L K G + ++ +MLEA C EA L G+T
Sbjct: 121 ALCKSGHASEAHSVFCRMWSSHEKGDRDAFVSMLEALCNAEKTAEAIDLLHMMPEKGITT 180
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
D Y +++ A K + L +M+ NG+ P+
Sbjct: 181 DVGMYNIIFSALGKLKQVSFMSSLYDKMKANGVAPD 216
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 159/341 (46%), Gaps = 10/341 (2%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
++F M++++ + D Y+ +I + K G+ A +F+EM G PD Y ALI
Sbjct: 368 KLFDEMRRKK-IVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDG 426
Query: 190 HLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
+ KA + +A +M KG+ PN+VTY L + +D N L E+
Sbjct: 427 YC----KAGEMKEAFSVHNQMVQKGL---TPNVVTYTALADGLCKNGEIDVANELLHEMS 479
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
L P++YTYN +++ K G I++ ++ M PD IT+ L+D+Y K
Sbjct: 480 RKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMA 539
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
K ++ + +++ + +PTL TFN ++ + + + E + + M P+ T+ ++
Sbjct: 540 KAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLM 599
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
Y +N+ EI+ + G +T N +++ +C EA L + G +
Sbjct: 600 KQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYS 659
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
++TY L + + K +KL + M ++G+V K +
Sbjct: 660 VTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIY 700
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 131/312 (41%), Gaps = 9/312 (2%)
Query: 159 GQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCK- 217
G+ + L E++ G +PD +YN +I + +A Q ++GM +
Sbjct: 291 GELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAE-------QLLRGMRKWGV 343
Query: 218 -PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
P+ V Y ++ + NV LF E+ + PDI TY V+ K+G + E
Sbjct: 344 FPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEARE 403
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+ + M +PD +T+ LID Y K + V ++ P + T+ ++
Sbjct: 404 MFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLC 463
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
K A + +M+ P+ TY I+ N+ + ++ +E+ G
Sbjct: 464 KNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTI 523
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
T +++AYC G +A L N + P T+ +L + + M E ++L++ M
Sbjct: 524 TYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWM 583
Query: 457 EQNGIVPNKRFF 468
+ GI+PN F
Sbjct: 584 LEKGIMPNATTF 595
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 134/311 (43%), Gaps = 15/311 (4%)
Query: 159 GQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKP 218
G+ R A L +M + G PD Y +++ + + L K L ++KG + KP
Sbjct: 256 GKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYC----RIGELDKVLKLVDELKG-KGLKP 310
Query: 219 NIVTYN-ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
+ YN I+L C V + L + + + + PD Y V+ + K G + +
Sbjct: 311 DEYIYNNIILLLCKNGEVV-EAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKL 369
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
M+ + PDI+T+ +I K + ++F ++ +P T+ ++I Y K
Sbjct: 370 FDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCK 429
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKV 395
A +A V +M TP+ +TY + G C N + A E+ E+S+ G V
Sbjct: 430 AGEMKEAFSVHNQMVQKGLTPNVVTYTALAD--GLCKNGEIDVANELLHEMSRKGLQPNV 487
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK----ANMKELVQK 451
T N ++ C G + L E G PD+ TY L AY K A EL++
Sbjct: 488 YTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRI 547
Query: 452 LLKRMEQNGIV 462
+L + Q +V
Sbjct: 548 MLNKRLQPTLV 558
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 120/269 (44%), Gaps = 5/269 (1%)
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+ + A+ F++ + C N V+ NI+L Q V + + L ++ + PD+ +
Sbjct: 221 EGIKIAVKVFEEFPELGVCW-NTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVS 279
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y V+ Y + G + ++ ++ +K KPD +N +I K + EQ+ + +
Sbjct: 280 YGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMR 339
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN-- 375
P + ++I + K A +F +M K P +TY +I +G C +
Sbjct: 340 KWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVI--HGICKSGK 397
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+ ARE+F+E+ G + T A+++ YC G EA + G+TP+ TY
Sbjct: 398 MVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTA 457
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L K ++ +LL M + G+ PN
Sbjct: 458 LADGLCKNGEIDVANELLHEMSRKGLQPN 486
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 140/299 (46%), Gaps = 11/299 (3%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
++ D YS L+ +GK G+ A+ +FS M+ +GC PD VYN LI+ K +
Sbjct: 113 FVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISC----LGKQGKV 168
Query: 201 AKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
+AL + M KG+ P+ TYNI++ + ++ + F + +PD+ TY
Sbjct: 169 DEALELLEDMNRKGI---MPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTY 225
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF-DKMEQVFKSLM 317
N +++ K E + M++N+C PD+ TF LID+ K D +EQ + L+
Sbjct: 226 NTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSAR-LV 284
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
P +N++I + ++ K +FQ M P ITY ++ + + S
Sbjct: 285 KMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTS 344
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
A E+ E+ + G ++T N ++ + M G +A LF+ G PD TY L
Sbjct: 345 MAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 133/287 (46%), Gaps = 6/287 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + LGK+ + + LEVF MQK + DT +Y+ LI+ +GK+G+ A+ L +M
Sbjct: 123 LMDALGKAGRAAKALEVFSNMQKAGC-MPDTVVYNVLISCLGKQGKVDEALELLEDMNRK 181
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G PD YN +I KA +F MK + P++VTYN LL + R
Sbjct: 182 GIMPDCRTYNIVI----DVLSSCGRYEKAYSFFGMMKRRKH-SPDVVTYNTLLNGLKKLR 236
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
D+ LF E+ + PD+ T+ ++D K G +++ +R+ P+ +N
Sbjct: 237 RTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYN 296
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
LI + + DK ++F+ ++ P T+ +++ + + A + Q+M
Sbjct: 297 ALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVRE 356
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
+TP+ TY +I V A +F E+ G + + T +A+
Sbjct: 357 GHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 174/422 (41%), Gaps = 45/422 (10%)
Query: 87 MRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTG 146
MR D P V N + + +C + G D+ L ++FR ++++ +
Sbjct: 1 MRETCDCAPDVVAYNTLI----AGYC-----KAGDGDRAL---DMFRRLKQEGSCKPNAV 48
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI------------------- 187
+ L+ + K + A+ +F EM +G + D +V N LI
Sbjct: 49 SFDTLVIFLCKMSRATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHM 108
Query: 188 TAHLHTRD------------KAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
TAH D KA AKAL F M+ C P+ V YN+L+ +
Sbjct: 109 TAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQK-AGCMPDTVVYNVLISCLGKQGK 167
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
VD+ L ++++ + PD TYN V+D G ++ S MK + PD++T+N
Sbjct: 168 VDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNT 227
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
L++ K + D+ +F + +K P L TF ++I KA A ++ M
Sbjct: 228 LLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMG 287
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
+ P+ Y +I+ + V + E+F ++ + T ++ + G + A
Sbjct: 288 HVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAM 347
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
L + G TP +TY +L ++ + A E L K M G P+ + + AL
Sbjct: 348 ELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTY-SALPNL 406
Query: 476 SS 477
S+
Sbjct: 407 ST 408
>gi|297808179|ref|XP_002871973.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317810|gb|EFH48232.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 831
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 164/333 (49%), Gaps = 7/333 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + ++ + L S+++ +G RPD ++NA+I A ++ L +A+ F
Sbjct: 357 YTTLVTALTRQKHFHSLLSLISKVQKNGLRPDTILFNAIINAS----SESGNLDQAMKIF 412
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE-LHESILAPDIYTYNGVMDAYG 266
+KMK CKP T+N L++ + +++ + L + L + +L P+ T N ++ A+
Sbjct: 413 EKMK-ESGCKPTASTFNTLIKGYGKIGKLEESSRLLEMMLRDEMLQPNDRTCNILVQAWC 471
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ-VFKSLMHSKEKPTL 325
I+E +++ +M+S KPD +TFN L +Y + + E + ++H+K KP +
Sbjct: 472 NQRKIEEAWNIVYKMQSFGVKPDAVTFNTLARAYSRIGSTCTAEDMIIPRMLHNKVKPNV 531
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T +++ Y + +A F +M + P+ + +I + +++ E+ D
Sbjct: 532 RTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDL 591
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ + G V T + ++ A+ G + ++ + G+ PD + +L K Y +A
Sbjct: 592 MEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYRDMLEGGIDPDIHAFSILAKGYARAGE 651
Query: 446 KELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
E +++L +M + G+ PN + + + + S+
Sbjct: 652 PEKAEQILNQMRKFGVRPNVVIYTQIISGWCSA 684
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 143/326 (43%), Gaps = 12/326 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT +++ +I + G AM +F +M+ SGC+P S +N LI + K L ++
Sbjct: 388 DTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGY----GKIGKLEES 443
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ M E +PN T NIL++A R +++ + ++ + PD T+N +
Sbjct: 444 SRLLEMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSFGVKPDAVTFNTLAR 503
Query: 264 AYGKNGMIKEMES-VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE- 321
AY + G E ++ RM N+ KP++ T +++ Y + KME+ + KE
Sbjct: 504 AYSRIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEE---GKMEEALRFFYRMKEL 560
Query: 322 --KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
P L FNS+I + V M P +T+ ++ + ++ R
Sbjct: 561 GVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRC 620
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
EI+ ++ + G D + + + + Y G P +A+ + GV P+ Y +
Sbjct: 621 EEIYRDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISG 680
Query: 440 YTKAN-MKELVQKLLKRMEQNGIVPN 464
+ A MK+ +Q K G+ PN
Sbjct: 681 WCSAGEMKKAMQVYNKMRGSVGLSPN 706
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 121/266 (45%), Gaps = 2/266 (0%)
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
E KP+I+TY L+ A + ++ + +L ++ ++ L PD +N +++A ++G + +
Sbjct: 348 EGHKPSIITYTTLVTALTRQKHFHSLLSLISKVQKNGLRPDTILFNAIINASSESGNLDQ 407
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-KPTLPTFNSMI 332
+ +MK + CKP TFN LI YGK ++ ++ + ++ + +P T N ++
Sbjct: 408 AMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLEMMLRDEMLQPNDRTCNILV 467
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE-IFDELSKLGK 391
+ R +A + KM + P +T+ + Y + A + I +
Sbjct: 468 QAWCNQRKIEEAWNIVYKMQSFGVKPDAVTFNTLARAYSRIGSTCTAEDMIIPRMLHNKV 527
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
V T ++ YC G EA F +GV P+ + L K + N + V +
Sbjct: 528 KPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGE 587
Query: 452 LLKRMEQNGIVPNKRFFLEALETFSS 477
++ ME+ G+ P+ F + +SS
Sbjct: 588 VVDLMEEFGVKPDVVTFSTLMNAWSS 613
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 108/242 (44%), Gaps = 6/242 (2%)
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ +++F L E P I TY ++ A + + S++S+++ N +PD I FN +I
Sbjct: 337 EAHSIFNTLIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVQKNGLRPDTILFNAII 396
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK-ARLQGKAEYVFQKMTAMKY 356
++ + D+ ++F+ + S KPT TFN++I YGK +L+ + + +
Sbjct: 397 NASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLEMMLRDEML 456
Query: 357 TPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG-LPTE 413
P+ T C I + +C+ + A I ++ G T N + AY G T
Sbjct: 457 QPNDRT--CNILVQAWCNQRKIEEAWNIVYKMQSFGVKPDAVTFNTLARAYSRIGSTCTA 514
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
D++ + V P+ T + Y + E + RM++ G+ PN F ++
Sbjct: 515 EDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIK 574
Query: 474 TF 475
F
Sbjct: 575 GF 576
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/272 (17%), Positives = 125/272 (45%), Gaps = 5/272 (1%)
Query: 170 EMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA 229
+M++ G +PD +N L A ++R + A+ + + + + KPN+ T ++
Sbjct: 485 KMQSFGVKPDAVTFNTL--ARAYSRIGSTCTAEDMIIPRMLH--NKVKPNVRTCGTIVNG 540
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
+ +++ F + E + P+++ +N ++ + + + V+ M+ KPD
Sbjct: 541 YCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPD 600
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
++TF+ L++++ + E++++ ++ P + F+ + Y +A KAE +
Sbjct: 601 VVTFSTLMNAWSSVGDMKRCEEIYRDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILN 660
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL-SKLGKDMKVSTLNAMLEAYCMN 408
+M P+ + Y II+ + + +A ++++++ +G ++T ++ +
Sbjct: 661 QMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYNKMRGSVGLSPNLTTYETLIWGFGEA 720
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
P +A+ L + V P T +L+ +
Sbjct: 721 KQPWKAEELLKEMEEKNVVPTRKTMQLIADGW 752
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 98/217 (45%), Gaps = 6/217 (2%)
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
D+ + +M+ + G +E S+ + + KP IIT+ L+ + +++ F + +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSIITYTTLVTALTRQKHFHSLLSLI 377
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
+ + +P FN++I ++ +A +F+KM P+ T+ +I YG
Sbjct: 378 SKVQKNGLRPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 374 DNVSRAREIFDELSKLGKDM---KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
+ + + + + L +M T N +++A+C EA + + GV PD+
Sbjct: 438 GKLEESSRLLEMM--LRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSFGVKPDA 495
Query: 431 STYKLLYKAYTKANMKELVQK-LLKRMEQNGIVPNKR 466
T+ L +AY++ + ++ RM N + PN R
Sbjct: 496 VTFNTLARAYSRIGSTCTAEDMIIPRMLHNKVKPNVR 532
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+C E++R M + D +S L + G+ A + ++MR G RP+ +Y +
Sbjct: 619 RCEEIYRDML-EGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQI 677
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
I+ A + KA+ + KM+G PN+ TY L+ +A+
Sbjct: 678 ISGWC----SAGEMKKAMQVYNKMRGSVGLSPNLTTYETLIWGFGEAK 721
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 155/334 (46%), Gaps = 15/334 (4%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+R + D YS +I + K G T +A+ L +M GC+P+ Y +I + K
Sbjct: 190 RRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLC----KD 245
Query: 198 KALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
+ A+ +M +G+ P++VTY+ +L ++++ LF E+ + P+
Sbjct: 246 TLVNDAMDLLSEMVDRGI---PPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNT 302
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
T+ ++D K GM+ E V M +P+ T+N L+D Y D+ ++V
Sbjct: 303 VTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDI 362
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
++ P + ++N +I Y K R +A+ + +M+ + TP +TY + M G C
Sbjct: 363 MVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTL--MQGLC-Q 419
Query: 376 VSRARE---IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
V R +E +F E+ G + T + +L+ C +G EA L ++ + PD
Sbjct: 420 VGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVL 479
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
Y +L + A E+ ++L ++ +GI P R
Sbjct: 480 YNILIEGMFIAGKLEVAKELFSKLFADGIQPTIR 513
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 158/353 (44%), Gaps = 20/353 (5%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L KS L++ R M+ ++ + Y+ +I + K AM L SEM + G P
Sbjct: 207 LCKSGNTSMALQLLRKME-EKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPP 265
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
D Y+ + LH L +A F +M G PN VT+ IL+ + V +
Sbjct: 266 DVVTYSTI----LHGFCSLGHLNEATILFNEMVG-RNVMPNTVTFTILVDGLCKEGMVSE 320
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+F+ + + P+ YTYN +MD Y N + E + VL M C P + ++N+LI+
Sbjct: 321 ARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILIN 380
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
Y KR+ D+ + + + + P T+++++ + +A +F++M + P
Sbjct: 381 GYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLP 440
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL-------NAMLEAYCMNGLP 411
+TY ++ G C + DE KL K M+ S + N ++E + G
Sbjct: 441 DLMTYSTLLD--GLCKHGH-----LDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKL 493
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A LF G+ P TY ++ K K + + +L ++ME +G +PN
Sbjct: 494 EVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPN 546
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 140/319 (43%), Gaps = 9/319 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+ + + + KK Q + L ++M G + N LI A++ LG
Sbjct: 95 FGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAIS-VLGKM 153
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K+ +P+ +T+N L+ + + LF E+ PD+ +Y+ V++ K
Sbjct: 154 FKLG----IQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCK 209
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+G +L +M+ CKP+++ + +IDS K + + ++ P + T
Sbjct: 210 SGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVT 269
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDE 385
+++++ + +A +F +M P+ +T+ ++ G C VS AR +F+
Sbjct: 270 YSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVD--GLCKEGMVSEARCVFEA 327
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
++K G + T NA+++ YC+N EA + + + G P +Y +L Y K
Sbjct: 328 MTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRR 387
Query: 446 KELVQKLLKRMEQNGIVPN 464
+ + LL M + + P+
Sbjct: 388 LDEAKSLLVEMSEKELTPD 406
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 106/218 (48%), Gaps = 9/218 (4%)
Query: 171 MRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALGYFQKMKGMERCKPNIVTYNILLR 228
M + GC P YN LI + R D+AK+L + + P+ VTY+ L++
Sbjct: 363 MVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSE-------KELTPDTVTYSTLMQ 415
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
Q + LFKE+ S L PD+ TY+ ++D K+G + E +L M+ ++ +P
Sbjct: 416 GLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEP 475
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
DI+ +N+LI+ + +++F L +PT+ T+ MI K L +A +F
Sbjct: 476 DIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELF 535
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
+KM + P+ +Y II + + S A + DE+
Sbjct: 536 RKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEM 573
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 116/266 (43%), Gaps = 1/266 (0%)
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
++ AL F +M M +P++V + L + A+ + V +L ++ + ++Y+
Sbjct: 72 SIDDALASFYRMLRMNP-RPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSL 130
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N +++ + + SVL +M +PD ITFN LI+ + +F ++
Sbjct: 131 NILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVR 190
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
+P + +++++I K+ A + +KM P+ + Y II V+
Sbjct: 191 RGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVND 250
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A ++ E+ G V T + +L +C G EA +LF V P++ T+ +L
Sbjct: 251 AMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVD 310
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPN 464
K M + + + M + G PN
Sbjct: 311 GLCKEGMVSEARCVFEAMTKKGAEPN 336
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 156/349 (44%), Gaps = 18/349 (5%)
Query: 135 MQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR 194
M K + I Y ++ + K G A+ +F M++ C P YN LI ++R
Sbjct: 1 MSKAKCAIGGDA-YDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLI----NSR 55
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
A KAL FQ MK +R +P+ TYN L+ + N + L E+ + +A +
Sbjct: 56 CNAGEFGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAAN 115
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
++TY+ ++ + K +E VL M + C PD+ FN ++ + + +K +V++
Sbjct: 116 VFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQ 175
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ-----KMTAMKYTPSFITYECIITM 369
++ S KP +++ +I +G A++ GK + + M A Y P+ IT+ +I
Sbjct: 176 HMVESGYKPDNVSYHILI--HGLAKI-GKLDESLKILSEMAMRAAGYVPNVITFSTLI-- 230
Query: 370 YGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
+G C + +A E+F + + G T ++ C +A LFE +
Sbjct: 231 HGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIP 290
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQN-GIVPNKRFFLEALETF 475
PD+ Y L Y K + +KL + M G+ P F ++ F
Sbjct: 291 PDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGF 339
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 192/408 (47%), Gaps = 36/408 (8%)
Query: 86 LMRSFSDKEPLVRTLNKYVKVVRSEHCF-------LLFEELGKSDKWLQCLEVFRWMQKQ 138
+++S + L + L + + ++SE C +L + ++ + L++F+ M+++
Sbjct: 16 VVQSLAKAGMLAQALEVF-ETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKRE 74
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
+ D Y+ LI+ + G T A L SEMR+ + Y+++I K
Sbjct: 75 KRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSII----------K 124
Query: 199 ALAKALGYFQKMKGMER-----CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP 253
+L K + K +E C P++ +N +++ A++ N+++ +++ + ES P
Sbjct: 125 SLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKP 184
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRM--KSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
D +Y+ ++ K G + E +LS M ++ P++ITF+ LI + +K +
Sbjct: 185 DNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALE 244
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
VF S++ + KP T+ ++I +A +A +F+KMT P + Y +I G
Sbjct: 245 VFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIA--G 302
Query: 372 YC--DNVSRAREIFDELS-KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
YC ++ A +++ E+S G + T N +++ +C G A+ L G+
Sbjct: 303 YCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAA 362
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
D+ TY++L ++A + ++ K+M + K+F L+ + S
Sbjct: 363 DTCTYRILIAGLSRATKLDEALEVYKQMRE------KKFLLDPVSCVS 404
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 5/214 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L ++ + + LEVF M + + Y+ LIA + + + A LF +M +
Sbjct: 229 LIHGLCRTGELEKALEVFGSMLEAGCK-PNKYTYTTLIAGLCRAEKVIQARELFEKMTQA 287
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
PD YN+LI + K ++ +A +++M G +P IVT+N L+ +
Sbjct: 288 CIPPDAVAYNSLIAGYC----KRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLG 343
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ + N L E+ LA D TY ++ + + E V +M+ + D ++
Sbjct: 344 KLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCV 403
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
+ K D+ VF++ S P TF
Sbjct: 404 SFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETF 437
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 11/188 (5%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN- 173
L L +++K +Q E+F M Q D Y+ LIA K+G A L+ EM
Sbjct: 264 LIAGLCRAEKVIQARELFEKMT-QACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGG 322
Query: 174 SGCRPDPSVYNALITA--HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
+G +P +N LI L +A L +G KG+ + TY IL+ +
Sbjct: 323 AGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMG----TKGL---AADTCTYRILIAGLS 375
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+A +D+ ++K++ E D + + K G I + +V + + P+
Sbjct: 376 RATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPE 435
Query: 292 TFNLLIDS 299
TF +L +S
Sbjct: 436 TFRILSES 443
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 147/355 (41%), Gaps = 46/355 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + +G + A+ + +MR +GC P+ YN L+ A + A
Sbjct: 193 YNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGA-------- 244
Query: 208 QKMKGMER---CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
+++ GM R KPN+VT+N ++ +A ++ +F E+ LAPD +YN ++
Sbjct: 245 ERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGG 304
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
Y K G E SV + M PD++TF LI K ++ + + + +
Sbjct: 305 YCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMN 364
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
TF ++I + K A + M + PS + Y +I Y + ARE+
Sbjct: 365 EVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLH 424
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNG-----------------LP---------------- 411
E+ G V T + ++ AYC N LP
Sbjct: 425 EMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEK 484
Query: 412 --TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
++A +LF+N +G+ PD TY L + K E L +M + G++P+
Sbjct: 485 RLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPD 539
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 132/287 (45%), Gaps = 8/287 (2%)
Query: 180 PSV--YNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
PSV YNA++ A +L A +F M + PN+ TYNIL+RA +
Sbjct: 154 PSVLAYNAVLLAL-----SDASLTSARRFFDSMLS-DGVAPNVYTYNILVRALCGRGHRK 207
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ ++ +++ + P++ TYN ++ A+ + G + E ++ M+ KP+++TFN ++
Sbjct: 208 EALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMV 267
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+ K + +VF ++ P ++N+++ Y KA +A VF +MT
Sbjct: 268 NGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIM 327
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P +T+ +I + N+ RA + ++ + G M T A+++ +C G +A L
Sbjct: 328 PDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLA 387
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ P Y L Y + ++LL ME G+ P+
Sbjct: 388 VRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPD 434
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 153/357 (42%), Gaps = 29/357 (8%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ L VF M Q+ + D ++ LI VM K G A+ L +MR G + + + AL
Sbjct: 313 EALSVFAEMT-QKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTAL 371
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERC--KPNIVTYNILLRACAQARNVDQVNALFK 244
I K L AL ++GM++C KP++V YN L+ +D+ L
Sbjct: 372 IDGFC----KKGFLDDAL---LAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLH 424
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
E+ L PD+ TY+ ++ AY KN + +M PD IT++ LI +
Sbjct: 425 EMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEK 484
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
+FK+++ +P T+ S+I + K A + KM P +TY
Sbjct: 485 RLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYS 544
Query: 365 CIITMYGYCDNVSRAREI---------------FDELSKLGKDMKVSTLNAMLEAYCMNG 409
+I A+++ +D L + ++ ++ A+L+ +CM G
Sbjct: 545 VLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKG 604
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN--MKELVQKLLKRMEQNGIVPN 464
L EAD ++++ + D S Y +L + +A MK L K+M Q G PN
Sbjct: 605 LMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKAL--SFHKQMLQGGFAPN 659
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 144/318 (45%), Gaps = 9/318 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ ++ M K G+ A +F EM G PD YN L+ + KA +AL F
Sbjct: 263 FNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYC----KAGCSHEALSVF 318
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M KG+ P++VT+ L+ +A N+++ L +++ E L + T+ ++D +
Sbjct: 319 AEMTQKGI---MPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGF 375
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G + + + MK + KP ++ +N LI+ Y D+ ++ + KP +
Sbjct: 376 CKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDV 435
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T++++I Y K A + Q+M P ITY +I + +S A +F
Sbjct: 436 VTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKN 495
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ KLG T ++++ +C G A L + GV PD TY +L +K+
Sbjct: 496 MIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSAR 555
Query: 446 KELVQKLLKRMEQNGIVP 463
Q+LL ++ +P
Sbjct: 556 AMEAQQLLFKLYHEDPIP 573
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 36/258 (13%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+++ YN +L A + A ++ F + +AP++YTYN ++ A G KE S+
Sbjct: 154 PSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSI 212
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L M+ C P+++T+N L+ ++ + D E++ + KP L TFNSM+ K
Sbjct: 213 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCK 272
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
A GK E AR++FDE+ + G +
Sbjct: 273 A---GKME--------------------------------DARKVFDEMVREGLAPDGVS 297
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
N ++ YC G EA +F G+ PD T+ L KA E L+++M
Sbjct: 298 YNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMR 357
Query: 458 QNGIVPNKRFFLEALETF 475
+ G+ N+ F ++ F
Sbjct: 358 ERGLQMNEVTFTALIDGF 375
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 149/338 (44%), Gaps = 28/338 (8%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI G+ A L EM G +PD Y+ +I+A+ D A
Sbjct: 403 YNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFE----LN 458
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
Q+M KG+ P+ +TY+ L+R + + + LFK + + L PD +TY ++D +
Sbjct: 459 QQMLEKGV---LPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGH 515
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR-QAFDKMEQVFK---------- 314
K G ++ S+ +M PD++T+++LI+ K +A + + +FK
Sbjct: 516 CKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPAN 575
Query: 315 ----SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+LMH K L + +++ + L +A+ V+Q M + Y +I +
Sbjct: 576 TKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLI--H 633
Query: 371 GYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
G+C NV +A ++ + G ++ +++ NG+ EAD + + N
Sbjct: 634 GHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLA 693
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
D+ K L + V +L M ++G++P+ R
Sbjct: 694 DAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPSPR 731
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 167/386 (43%), Gaps = 39/386 (10%)
Query: 108 RSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWL 167
+ E FLLFEE+ K+ +AD Y+ ++ K G A
Sbjct: 498 KMELAFLLFEEM-----------------KRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
F+EMR GC P+ Y ALI A+L KAK ++ A F+ M E C PNIVTY+ L+
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYL----KAKKVSYANELFETMLS-EGCLPNIVTYSALI 595
Query: 228 ----------RAC------AQARNVDQVNALFKELHE-SILAPDIYTYNGVMDAYGKNGM 270
+AC +++V V+ FK+ + + P++ Y ++D + K
Sbjct: 596 DGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHR 655
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
++E +L M C+P+ I ++ LID K D+ ++V + TL T++S
Sbjct: 656 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSS 715
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
+I Y K + Q A V KM P+ + Y +I A ++ + + G
Sbjct: 716 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 775
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
V T AM++ + G L E + GV P+ TY++L K ++
Sbjct: 776 CQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAH 835
Query: 451 KLLKRMEQNGIVPNKRFFLEALETFS 476
LL+ M+Q + + + +E F+
Sbjct: 836 NLLEEMKQTHWPTHAAGYRKVIEGFN 861
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 158/401 (39%), Gaps = 56/401 (13%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+C V M + Y I++ L+ G A L +M G P VYN L
Sbjct: 355 RCKRVLNMMMMEGCY-PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNIL 413
Query: 187 ITAHLHTRDK-------------------------------------AKALAKALGYFQK 209
I + +D A KA ++
Sbjct: 414 IGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 473
Query: 210 MKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG 269
M G + P+ TY+ +L A ++ LF+E+ L D+YTY ++D++ K G
Sbjct: 474 MIG-QGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAG 532
Query: 270 MIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFN 329
+I++ + M+ C P+++T+ LI +Y K + ++F++++ P + T++
Sbjct: 533 LIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYS 592
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY------------ECII---TMYGYC- 373
++I + KA KA +F++M K P Y +I + G+C
Sbjct: 593 ALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCK 652
Query: 374 -DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
V AR++ D +S G + +A+++ C G EA + G T
Sbjct: 653 LHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYT 712
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
Y L Y K ++L K+L +M +N PN + E ++
Sbjct: 713 YSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMID 753
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/388 (18%), Positives = 162/388 (41%), Gaps = 43/388 (11%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
+ F W +Q Y + +Y+ L+ ++ + ++ L ++R+ D V+ +
Sbjct: 149 ISFFVWAGRQIGYKHTSPVYNALVDLIVRDDDEKVPEELLQQIRDD----DKEVFGEFLN 204
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
+ ++ + + AL ++K R +P+ TYN L++A +A +D + + +E+
Sbjct: 205 VLVRKYCRSGSFSIALEELGRLKDF-RFRPSRSTYNCLIQAFLKADCLDSASLVHREMSL 263
Query: 249 SIL--------------------------------APDIYTYNGVMDAYGKNGMIKEMES 276
+ L PD Y ++ + + +E
Sbjct: 264 ANLRMDGFTLRCYAYSLCKVGKWREALTLMETENFVPDTVFYTKLISGLCEASLFEEAMD 323
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
L+RM++ C P+++T++ L+ ++ + ++V +M P+ FNS++ Y
Sbjct: 324 FLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYC 383
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECII-TMYGYCDNVS-----RAREIFDELSKLG 390
+ A + +KM +TP ++ Y +I ++ G D++S A + + E+ G
Sbjct: 384 TSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATG 443
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
+ +++ C G +A + G PD+STY + A+ EL
Sbjct: 444 VVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAF 503
Query: 451 KLLKRMEQNGIVPNKRFFLEALETFSSS 478
L + M++ G+V + + +++F +
Sbjct: 504 LLFEEMKRGGLVADVYTYTIMVDSFCKA 531
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 151/358 (42%), Gaps = 27/358 (7%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L K KW + L + + ++ DT Y+KLI+ + + AM + MR + C P
Sbjct: 280 LCKVGKWREALT----LMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQK---MKGMERCKPNIVTYNILLRACAQARN 235
+ Y+ L+ L+ K LG ++ M ME C P+ +N L+ A + +
Sbjct: 336 NVVTYSTLLCGCLNK--------KQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGD 387
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKN------GMIKEMESVLSRMKSNQC--- 286
L K++ + P YN ++ + + +++ E S M +
Sbjct: 388 HSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLN 447
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
K ++ +F + S GK ++K V + ++ P T++ ++ A A
Sbjct: 448 KINVSSFTRCLCSAGK---YEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFL 504
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+F++M TY ++ + + +AR+ F+E+ ++G V T A++ AY
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYL 564
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ A+ LFE + G P+ TY L + KA E ++ +RM + VP+
Sbjct: 565 KAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPD 622
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 131/323 (40%), Gaps = 53/323 (16%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK---AKALAKA 203
+Y LI + K G+ A + +EM G Y++LI + + + +K L+K
Sbjct: 677 VYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKM 736
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L C PN+V Y ++ + D+ L + + E P++ TY ++D
Sbjct: 737 LE--------NSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 788
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD-------KMEQ----- 311
+G+ G I+ +L RM S P+ +T+ +LID K A D +M+Q
Sbjct: 789 GFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 848
Query: 312 ---------------------VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
+ + P L + ++ N KA+ A + ++
Sbjct: 849 HAAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEE 908
Query: 351 M-----TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+ T + Y+ TY +I + V +A +F E+SK G ++ T ++++
Sbjct: 909 VATFSATLVDYSS---TYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGL 965
Query: 406 CMNGLPTEADLLFENSHNMGVTP 428
N +EA LL + +M V P
Sbjct: 966 FRNSKISEALLLLDFISHM-VCP 987
>gi|302819136|ref|XP_002991239.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
gi|300140950|gb|EFJ07667.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
Length = 561
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 194/471 (41%), Gaps = 20/471 (4%)
Query: 17 SSSSASSSSSSSSSSFNQSSSQNYNFTHRHIPLSLRTRPRTGICCVWTRPRSKRGRKSEE 76
SSS S + SSS + + R +R + + R R+ R
Sbjct: 23 GSSSLSDCTEPCSSSVASPCWISSRYDPRGAGRGVRIQVAAAVARNSPRIRNLRNNPGPA 82
Query: 77 LESKELV--RVLMRSFSDKEPLVRTLNKYVKV--VRSEHCFLLFEELGKSDKWLQCLEVF 132
L ++L R+++ EPL L KY + E + W ++
Sbjct: 83 LSPEQLAWERMMLEVEKSPEPLA-ILKKYAGDGNISRESVVGTLTRFKQMQAWKIIIKFT 141
Query: 133 RWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH 192
W+ +Q WY + Y ++ K GQ +F M G + +Y I +
Sbjct: 142 EWLMEQGWYNFNQKDYFLVLLAYCKDGQVDKTEGIFQRMAELGVVANIEMYTLQIEGYGR 201
Query: 193 TR--DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES- 249
R DKA+A+ FQ++ P TY ++++ ++A +D V +FK + +S
Sbjct: 202 RRSFDKAEAV------FQRLL-TTGPSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSP 254
Query: 250 --ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
+ PD YN ++ YGK G +++ SV MK + I+TFN L+ ++ +
Sbjct: 255 SPTVKPDARMYNLMIHTYGKQGKVEQAMSVYQSMKRERVALTIVTFNSLLAC---QKTWK 311
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
E VF+ L +K P + ++ +++ Y KAR A F M A P+ + Y +I
Sbjct: 312 DAEDVFRKLQAAKLDPDVFSYTALVNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNALI 371
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
Y C + AR + ++ + G V + +++ AY L +A+ +
Sbjct: 372 NAYAKCKDPEGARAVLKQMKQNGCTPTVESYTSLISAYVSVNLMAKAEQTVLRMKEADLQ 431
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
P+ T+ +L Y N + + + + M+ G+ PN+ + + + S+
Sbjct: 432 PNLQTFCVLMTGYANGNKLDNMMRSFETMKLAGLEPNRHVYTVLVNAYGSN 482
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 135/317 (42%), Gaps = 14/317 (4%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
L ++ + +PD +YN +I HT K + +A+ +Q MK ER IVT+N L
Sbjct: 249 LVTDSPSPTVKPDARMYNLMI----HTYGKQGKVEQAMSVYQSMK-RERVALTIVTFNSL 303
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
L ++ + V F++L + L PD+++Y +++AY K + + M +
Sbjct: 304 LACQKTWKDAEDV---FRKLQAAKLDPDVFSYTALVNAYAKARRAECAHAAFDDMIAAGI 360
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
+P + +N LI++Y K + + V K + + PT+ ++ S+I Y L KAE
Sbjct: 361 RPTQVAYNALINAYAKCKDPEGARAVLKQMKQNGCTPTVESYTSLISAYVSVNLMAKAEQ 420
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+M P+ T+ ++T Y + + F+ + G + ++ AY
Sbjct: 421 TVLRMKEADLQPNLQTFCVLMTGYANGNKLDNMMRSFETMKLAGLEPNRHVYTVLVNAYG 480
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
N A + ++ G PD +L K E + +LL G+ R
Sbjct: 481 SNDDFDSAIIWYKQMLGTGYKPDPILRTVLLKIAKSHEQTEEIHELL------GMQKPAR 534
Query: 467 FFLEALETFSSSLAGSQ 483
E L+T +L Q
Sbjct: 535 SLEEGLDTGLDTLVLPQ 551
>gi|302776756|ref|XP_002971525.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
gi|300160657|gb|EFJ27274.1| hypothetical protein SELMODRAFT_95815 [Selaginella moellendorffii]
Length = 356
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 139/293 (47%), Gaps = 7/293 (2%)
Query: 183 YNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL 242
YNA+I A+ + A Y+Q + E P+ VTY+IL+ +N ++ L
Sbjct: 33 YNAMIAAYYQAKRPKDAWDV---YYQMLA--EGIDPDDVTYDILV--SGSGKNGYPIDRL 85
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
F E+ +A + +YN V+ A+ K G I ++E V+ M + +PD+ +FN LI +Y
Sbjct: 86 FLEIKSRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAAYAM 145
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ ++ QVF ++ + P + T+ ++I + ++ + +A +F++M K P F
Sbjct: 146 SRKPERGLQVFSNMKAAGVLPDIVTYTTLIQMFSRSAMHKEAIEMFEEMVVNKCQPDFFV 205
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y ++++YG V+ A IF L G + T +++ A+ GL E+ F
Sbjct: 206 YSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSLISAHLHKGLLEESRKHFSQME 265
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
G D + AY KA M LL R+ G+ PN+ + +E F
Sbjct: 266 AYGCRADVHLLNTMIDAYAKAGMVNDAANLLHRLTAQGVCPNRASYAIIVEGF 318
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 154/318 (48%), Gaps = 15/318 (4%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E+F+W++ Q W Y+ +IA + + + A ++ +M G PD Y+ L++
Sbjct: 17 ELFQWIKLQDW--DKLRPYNAMIAAYYQAKRPKDAWDVYYQMLAEGIDPDDVTYDILVSG 74
Query: 190 ---HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
+ + D+ K+ G ++ +YN+++ A + ++D+V + +E+
Sbjct: 75 SGKNGYPIDRLFLEIKSRGVALTLR----------SYNVVICAFTKEGSIDKVEEVIREM 124
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
L PD++++N ++ AY + + V S MK+ PDI+T+ LI + +
Sbjct: 125 IRQELRPDLFSFNALIAAYAMSRKPERGLQVFSNMKAAGVLPDIVTYTTLIQMFSRSAMH 184
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ ++F+ ++ +K +P ++ ++ YGKA L A +F ++ + P+ +TY +
Sbjct: 185 KEAIEMFEEMVVNKCQPDFFVYSLLVSVYGKAGLVADALLIFHRLQLEGHRPNIVTYTSL 244
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I+ + + + +R+ F ++ G V LN M++AY G+ +A L GV
Sbjct: 245 ISAHLHKGLLEESRKHFSQMEAYGCRADVHLLNTMIDAYAKAGMVNDAANLLHRLTAQGV 304
Query: 427 TPDSSTYKLLYKAYTKAN 444
P+ ++Y ++ + + A
Sbjct: 305 CPNRASYAIIVEGFLHAG 322
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 68/154 (44%), Gaps = 2/154 (1%)
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
L +N+MI Y +A+ A V+ +M A P +TY+ +++ G N +F
Sbjct: 30 LRPYNAMIAAYYQAKRPKDAWDVYYQMLAEGIDPDDVTYDILVS--GSGKNGYPIDRLFL 87
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E+ G + + + N ++ A+ G + + + + PD ++ L AY +
Sbjct: 88 EIKSRGVALTLRSYNVVICAFTKEGSIDKVEEVIREMIRQELRPDLFSFNALIAAYAMSR 147
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
E ++ M+ G++P+ + ++ FS S
Sbjct: 148 KPERGLQVFSNMKAAGVLPDIVTYTTLIQMFSRS 181
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 166/354 (46%), Gaps = 12/354 (3%)
Query: 128 CLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG-CRPDPSVYNAL 186
L++ R M+++ + Y +I+ K G+ A+ +F EM G +P+ +YNAL
Sbjct: 204 ALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNAL 263
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKE 245
I + D+ K L AL Y +M +ER + TYN+L+ A + L +E
Sbjct: 264 IGGYC---DQGK-LDTALLYRDRM--VERGVAMTVATYNLLVHALFMDGRGTEAYELVEE 317
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ LA D++TYN +++ + K G +K+ + M + ++T+ LI + K+
Sbjct: 318 MGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQ 377
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+ +++F + +P L +N++I ++ + +A + +M + P +TY
Sbjct: 378 VQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNT 437
Query: 366 IITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+ M G C V AR++ DE++K G + T N ++ Y M G +A + N
Sbjct: 438 L--MRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMN 495
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
G P TY L + K + + ++K M +NGI P+ ++ +E ++
Sbjct: 496 KGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTT 549
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 119/296 (40%), Gaps = 13/296 (4%)
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
TA LH A A A F M + R T+NI+LR A + L +++
Sbjct: 123 TASLHPLLSALPSAPAFALFADMFRL-RLPLCTTTFNIMLRHLCSAGKPARALELLRQMP 181
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS-NQCKPDIITFNLLIDSYGKRQAF 306
P+ TYN V+ + G ++ ++ M+ P+ T+ +I + K
Sbjct: 182 R----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRV 237
Query: 307 DKMEQVFKSLMHSKE-KPTLPTFNSMIINYGKARLQGKAEYVF---QKMTAMKYTPSFIT 362
D+ +VF ++ E KP +N++I Y QGK + +M + T
Sbjct: 238 DEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD---QGKLDTALLYRDRMVERGVAMTVAT 294
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y ++ + A E+ +E+ G + V T N ++ +C G +A +FEN
Sbjct: 295 YNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMS 354
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
GV TY L A +K + KL + GI P+ + + + S+S
Sbjct: 355 RRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTS 410
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 149/325 (45%), Gaps = 12/325 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L KS + + L +F+ + Q + D YS L+ GK G+ A+ +F M+ +
Sbjct: 306 LLIALCKSKQLEEALTLFQEAE-QGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKA 364
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQ 232
GC PD VYN LI+ K + +AL + M KG+ P+ TYNI++ +
Sbjct: 365 GCMPDTVVYNVLISC----LGKQGKVDEALELLEDMNRKGI---MPDCRTYNIVIDVLSS 417
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
++ + F + +PD+ TYN +++ K E + M++N+C PD+ T
Sbjct: 418 CGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTT 477
Query: 293 FNLLIDSYGKRQAF-DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
F LID+ K D +EQ + L+ P +N++I + ++ K +FQ M
Sbjct: 478 FGTLIDTLAKAGRMEDALEQSAR-LVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDM 536
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P ITY ++ + + S A E+ E+ + G ++T N ++ + M G
Sbjct: 537 IECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQV 596
Query: 412 TEADLLFENSHNMGVTPDSSTYKLL 436
+A LF+ G PD TY L
Sbjct: 597 EDAYTLFKEMIAKGFNPDMQTYSAL 621
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 168/375 (44%), Gaps = 15/375 (4%)
Query: 107 VRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMW 166
V C F G D + L+ M++ + DT ++ + + + + AM
Sbjct: 54 VTCTECIQAFGRAGDLDAAMGMLD---DMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMT 110
Query: 167 LFSEMRNS-GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNI 225
LF +MR + C PD YN LI + D +AL F+++K CKPN V+++
Sbjct: 111 LFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRAL----DMFRRLKQEGSCKPNAVSFDT 166
Query: 226 L-LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
L + C +R D + A+F+E+ + L D+ N ++ + GM+++ +L M ++
Sbjct: 167 LVIFLCKMSRATDAL-AVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAH 225
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
C D T+ +L++++ + ++ + H + +N +I + + +A
Sbjct: 226 ACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEA 285
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAML 402
+F+ + P TY +I + C + + A +F E + G + V T + ++
Sbjct: 286 TQLFESTMTKESVPDVFTYNLLIAL---CKSKQLEEALTLFQEAEQGGVVLDVFTYSYLM 342
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+A+ G +A +F N G PD+ Y +L K + +LL+ M + GI+
Sbjct: 343 DAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIM 402
Query: 463 PNKRFFLEALETFSS 477
P+ R + ++ SS
Sbjct: 403 PDCRTYNIVIDVLSS 417
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 159/410 (38%), Gaps = 67/410 (16%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L K + L VF+ M AD + + LI + G R A L M C
Sbjct: 171 LCKMSRATDALAVFQEMLGAGLK-ADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACAR 229
Query: 179 DPSVYNALITAH-----LHTRDKAKALAK-------ALGYFQKMKGMERCK--------- 217
D Y L+ AH +H LA+ A+ Y ++G RC
Sbjct: 230 DAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLF 289
Query: 218 ---------PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
P++ TYN+L+ C +++ +++ LF+E + + D++TY+ +MDA+GK
Sbjct: 290 ESTMTKESVPDVFTYNLLIALC-KSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKA 348
Query: 269 GMIKEMESVLSRMKSNQCKPDII-----------------------------------TF 293
G + V M+ C PD + T+
Sbjct: 349 GRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTY 408
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N++ID ++K F + K P + T+N+++ K R +A +F +M A
Sbjct: 409 NIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQA 468
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
K P T+ +I + A E L K+G NA++ +C +G +
Sbjct: 469 NKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDK 528
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
LF++ PDS TY +L +++ + +LL+ M + G P
Sbjct: 529 GYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTP 578
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 144/326 (44%), Gaps = 12/326 (3%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ D Y+ LIA+ K Q A+ LF E G D Y+ L+ A KA A
Sbjct: 298 VPDVFTYNLLIALCKSK-QLEEALTLFQEAEQGGVVLDVFTYSYLMDAF----GKAGRAA 352
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
KAL F M+ C P+ V YN+L+ + VD+ L ++++ + PD TYN V
Sbjct: 353 KALEVFYNMQK-AGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIV 411
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+D G ++ S MK + PD++T+N L++ K + D+ +F + +K
Sbjct: 412 IDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKC 471
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQ---KMTAMKYTPSFITYECIITMYGYCDNVSR 378
P L TF ++I KA G+ E + ++ M + P+ Y +I+ + V +
Sbjct: 472 MPDLTTFGTLIDTLAKA---GRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDK 528
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
E+F ++ + T ++ + G + A L + G TP +TY +L +
Sbjct: 529 GYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIR 588
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPN 464
+ + A E L K M G P+
Sbjct: 589 SLSMAGQVEDAYTLFKEMIAKGFNPD 614
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 191/426 (44%), Gaps = 27/426 (6%)
Query: 35 SSSQNYNFTHRHIPLSLRTRPRTGICCVWTRPRSKRGRKSEELESKELVRVLMRSFSDKE 94
S S +Y F R L R + ICC + +R + + + ++ L R K
Sbjct: 38 SGSDDYVFLLRE--LGNRGDCKKAICCFEFAVKRERKKNEQGKLASAMISTLGRL--GKV 93
Query: 95 PLVRTLNKYVKVVRSEHCFLLFEEL----GKSDKWLQCLEVFRWMQKQRWYIADTGI--- 147
+ +T+ K + F + G+S + +++F M+ D G+
Sbjct: 94 EMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMK-------DYGLKPN 146
Query: 148 ---YSKLIAVMGKKG-QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
Y+ +I GK G + + + +F EM +G +PD +N+L+ + ++ A++
Sbjct: 147 LVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLA--VCSKGGLWEAARS 204
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L +G+++ +I TYN LL A + +D + E+ + P++ TY+ ++D
Sbjct: 205 LSCEMVNRGIDQ---DIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMID 261
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
Y K G + + ++ + MK D +++N L+ Y K F++ V + + +S +
Sbjct: 262 GYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRK 321
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T+N+++ YGK VF++M A +P+ +TY +I +Y A ++F
Sbjct: 322 DVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVF 381
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
E K G V +A+++A C NGL A L + G+ P+ TY + A+ +
Sbjct: 382 REFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRP 441
Query: 444 NMKELV 449
E V
Sbjct: 442 ATTESV 447
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 146/331 (44%), Gaps = 8/331 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+S +I+ G+ G A+ +F M++ G +P+ YNA+I A + L F
Sbjct: 115 FSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDA---CGKGGVEFKRVLEIF 171
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M GM+ P+ +T+N LL C++ + +L E+ + DI+TYN ++DA
Sbjct: 172 DEMLRNGMQ---PDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAV 228
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G + ++S M + P+++T++ +ID Y K D +F +
Sbjct: 229 CKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDR 288
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
++N+++ Y K +A V ++M +TY ++ YG R++F+E
Sbjct: 289 VSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEE 348
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ + T + +++ Y GL EA +F G+ D Y L A K +
Sbjct: 349 MKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGL 408
Query: 446 KELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
E LL M + GI PN + ++ F
Sbjct: 409 VESAVSLLDEMTKEGIRPNVVTYNSIIDAFG 439
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 148/321 (46%), Gaps = 38/321 (11%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+++ K G+ AM + EM NSG R D YNAL+ + + K + K F
Sbjct: 291 YNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGY-GKQYKYDVVRKV---F 346
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++MK PN++TY+ L+ ++ + +F+E ++ L D+ Y+ ++DA K
Sbjct: 347 EEMKA-RHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCK 405
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM------------------ 309
NG+++ S+L M +P+++T+N +ID++G+ + +
Sbjct: 406 NGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRPATTESVVDDAGQTSELQIDSLSSS 465
Query: 310 --EQVFKSLMHSKEKP-TLPTFNSMIIN-YGKARLQGKAEY-----VFQKMTAMKYTPSF 360
E+ KSL+ +E + F + G+A+ G E VF KM ++ P+
Sbjct: 466 AVEKATKSLVADREDNRIIKIFGQLAAEKAGQAKNSGGQEMMCILGVFHKMHELEIKPNV 525
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
+T+ I+ C++ A + +EL +L + + +L Y N + +A LF+
Sbjct: 526 VTFSAILNACSRCNSFEEASMLLEEL-RLFDNQVYGVAHGLLMGYREN-VWEQAQSLFDE 583
Query: 421 SHNMGVTPDSSTYKLLYKAYT 441
M DSST Y A T
Sbjct: 584 VKLM----DSSTASAFYNALT 600
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 117/258 (45%), Gaps = 1/258 (0%)
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM-IKEMESVL 278
+ ++ ++ A ++ ++ +F + + L P++ TYN V+DA GK G+ K + +
Sbjct: 112 VYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIF 171
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
M N +PD ITFN L+ K ++ + +++ + T+N+++ K
Sbjct: 172 DEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKG 231
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
A + +M A P+ +TY +I Y + AR +F+E+ LG + +
Sbjct: 232 GQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSY 291
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N +L Y G EA + N G+ D TY L Y K ++V+K+ + M+
Sbjct: 292 NTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKA 351
Query: 459 NGIVPNKRFFLEALETFS 476
+ PN + ++ +S
Sbjct: 352 RHVSPNLLTYSTLIDVYS 369
>gi|168062855|ref|XP_001783392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665090|gb|EDQ51786.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 540
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 160/353 (45%), Gaps = 11/353 (3%)
Query: 111 HCFLLFEE-LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFS 169
H ++ F L + KW+ LE+ + D Y+ +I G+ + A FS
Sbjct: 25 HLYVAFAHCLMRVQKWV-ALEILVDEMIGKNCPPDIKFYALVIKEAINTGRFQTAQHWFS 83
Query: 170 EMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA 229
+M+ GC PD +YN LI + K ++A+ YF ++K E P+ TY +L A
Sbjct: 84 KMKLLGCPPDIVIYNILILEY----GKRGNFSQAMKYFSQLKD-EGLLPDSGTYCAVLSA 138
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
C + N+D+ N KE+ E+ + PD Y+ ++D +GK G ++ + ++ + PD
Sbjct: 139 CRKVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAAATFRELQMSGYLPD 198
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHS--KEKPTLPTFNSMIINYGKARLQGKAEYV 347
+ +N LI ++ K D+ VFK S + P + F +MI Y KAR+ +A +V
Sbjct: 199 SVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVI--FYTMIQVYAKARMADQALHV 256
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
+ M + P+ + Y ++ + + A ++F+E+ + ST ML Y
Sbjct: 257 LKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGESTYITMLNVYSK 316
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
G + A+ L +G + Y L Y K + +L M+Q G
Sbjct: 317 AGFHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGKLQEATRLFSTMKQQG 369
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 154/374 (41%), Gaps = 52/374 (13%)
Query: 133 RWMQKQRWY--------IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
R+ Q W+ D IY+ LI GK+G AM FS++++ G PD Y
Sbjct: 74 RFQTAQHWFSKMKLLGCPPDIVIYNILILEYGKRGNFSQAMKYFSQLKDEGLLPDSGTYC 133
Query: 185 ALITA--HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL 242
A+++A + DK K + + G+ KP+ V Y+IL+ +A + A
Sbjct: 134 AVLSACRKVGNIDKGNETLKEM----REAGI---KPDQVAYSILIDMFGKAGRHEDAAAT 186
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
F+EL S PD YN ++ A+ K GM+ + V + + C D + F +I Y K
Sbjct: 187 FRELQMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAK 246
Query: 303 RQAFDKMEQVFK---------------SLMHSKEKPTLP--------------------T 327
+ D+ V K S++++ + P T
Sbjct: 247 ARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGEST 306
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ +M+ Y KA AE + KM + + + + Y +I MYG + A +F +
Sbjct: 307 YITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGKLQEATRLFSTMK 366
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ G + N ML+ Y G +A+ L + + PD+ TY L AY + E
Sbjct: 367 QQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVPDTVTYTTLINAYNRLGRFE 426
Query: 448 LVQKLLKRMEQNGI 461
++ ++ +G+
Sbjct: 427 ECIRVFEQHRADGL 440
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 139/341 (40%), Gaps = 15/341 (4%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMW-----LFSEMRNSGCRPDPSVY 183
+E ++W++ Q + +Y + R+ W L EM C PD Y
Sbjct: 8 VEFYKWVKSQDGFEPHFHLYVAFAHCL-----MRVQKWVALEILVDEMIGKNCPPDIKFY 62
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
+I ++T A +F KMK + C P+IV YNIL+ + N Q F
Sbjct: 63 ALVIKEAINT----GRFQTAQHWFSKMK-LLGCPPDIVIYNILILEYGKRGNFSQAMKYF 117
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR 303
+L + L PD TY V+ A K G I + L M+ KPD + +++LID +GK
Sbjct: 118 SQLKDEGLLPDSGTYCAVLSACRKVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFGKA 177
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
+ F+ L S P +N++I + K + +A VF++ + +
Sbjct: 178 GRHEDAAATFRELQMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIF 237
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+I +Y +A + + ++G ++L A+ P A LFE
Sbjct: 238 YTMIQVYAKARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQE 297
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
STY + Y+KA ++LL +M Q G N
Sbjct: 298 SNCRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRN 338
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 164/402 (40%), Gaps = 45/402 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L E GK + Q ++ F + K + D+G Y +++ K G EMR
Sbjct: 99 ILILEYGKRGNFSQAMKYFSQL-KDEGLLPDSGTYCAVLSACRKVGNIDKGNETLKEMRE 157
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
+G +PD Y+ LI KA A F++++ M P+ V YN L+ A A+
Sbjct: 158 AGIKPDQVAYSILIDMF----GKAGRHEDAAATFRELQ-MSGYLPDSVAYNTLIHAFAKV 212
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
VDQ +FKE S D + ++ Y K M + VL MK +P+ + +
Sbjct: 213 GMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARMADQALHVLKLMKEIGLQPNELGY 272
Query: 294 NLLIDSY-------GKRQAFDKMEQ---------------VF-KSLMHSKEKPTLP---- 326
+++++ G + F++M++ V+ K+ HS + L
Sbjct: 273 GSVLNAFMRANQPMGAIKLFEEMQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMRQ 332
Query: 327 --------TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
++++I YGK +A +F M + I Y ++ MYG ++
Sbjct: 333 LGFRRNVVAYSTLIDMYGKVGKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRIND 392
Query: 379 AREIFDEL--SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
A + EL SKL D T ++ AY G E +FE G+ D ++
Sbjct: 393 AERLMAELKDSKLVPD--TVTYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAIM 450
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
Y KA + +LL+ M ++GI P+ R +E +
Sbjct: 451 INVYGKARQYSKLAELLEVMPKSGIQPDTRILKTVVEIYEDG 492
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 147/356 (41%), Gaps = 41/356 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + GK+ + FR +Q Y+ D+ Y+ LI K G A +F E +
Sbjct: 169 ILIDMFGKAGRHEDAAATFRELQ-MSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQR 227
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
S C DP ++ +I + KA+ +AL + MK + +PN + Y +L A +A
Sbjct: 228 SFCLDDPVIFYTMIQVYA----KARMADQALHVLKLMKEIG-LQPNELGYGSVLNAFMRA 282
Query: 234 RNVDQVNALFKELHES---------------------------ILAP--------DIYTY 258
LF+E+ ES +LA ++ Y
Sbjct: 283 NQPMGAIKLFEEMQESNCRFGESTYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAY 342
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
+ ++D YGK G ++E + S MK CK ++I +N ++D YGK + E++ L
Sbjct: 343 STLIDMYGKVGKLQEATRLFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKD 402
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
SK P T+ ++I Y + + VF++ A I +I +YG S+
Sbjct: 403 SKLVPDTVTYTTLINAYNRLGRFEECIRVFEQHRADGLKLDRILVAIMINVYGKARQYSK 462
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
E+ + + K G L ++E Y G+ A L + +G ++ +K
Sbjct: 463 LAELLEVMPKSGIQPDTRILKTVVEIYEDGGMCENAAELLRKINELGPLEGNTLHK 518
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 109/270 (40%)
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+++ +K + +P+ Y + + + L E+ PDI Y V+
Sbjct: 10 FYKWVKSQDGFEPHFHLYVAFAHCLMRVQKWVALEILVDEMIGKNCPPDIKFYALVIKEA 69
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
G + + S+MK C PDI+ +N+LI YGKR F + + F L P
Sbjct: 70 INTGRFQTAQHWFSKMKLLGCPPDIVIYNILILEYGKRGNFSQAMKYFSQLKDEGLLPDS 129
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+ +++ K K ++M P + Y +I M+G A F E
Sbjct: 130 GTYCAVLSACRKVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAAATFRE 189
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
L G N ++ A+ G+ +A L+F+ + D + + + Y KA M
Sbjct: 190 LQMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARM 249
Query: 446 KELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ +LK M++ G+ PN+ + L F
Sbjct: 250 ADQALHVLKLMKEIGLQPNELGYGSVLNAF 279
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 67/168 (39%), Gaps = 3/168 (1%)
Query: 311 QVFKSLMHSKEKPTLPTFNSMIIN--YGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
++ M K P F +++I R Q A++ F KM + P + Y +I
Sbjct: 44 EILVDEMIGKNCPPDIKFYALVIKEAINTGRFQ-TAQHWFSKMKLLGCPPDIVIYNILIL 102
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
YG N S+A + F +L G T A+L A G + + + G+ P
Sbjct: 103 EYGKRGNFSQAMKYFSQLKDEGLLPDSGTYCAVLSACRKVGNIDKGNETLKEMREAGIKP 162
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
D Y +L + KA E + ++ +G +P+ + + F+
Sbjct: 163 DQVAYSILIDMFGKAGRHEDAAATFRELQMSGYLPDSVAYNTLIHAFA 210
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 125/270 (46%), Gaps = 5/270 (1%)
Query: 211 KGMERCK-----PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
K M+RC P I TYNIL+ +AR D +F L + L PD+++YN ++D +
Sbjct: 175 KRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGF 234
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G + + + +M+ P+++T++ LI+ K + DK E+V + ++ + +P
Sbjct: 235 SKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNN 294
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+N +I Y + + ++ VF++M++ P +T + AR+IFD
Sbjct: 295 MTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDS 354
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ G V + A+L Y G D LF GV PD + L AY + M
Sbjct: 355 MVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGM 414
Query: 446 KELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ + + M + G+ P+ F + F
Sbjct: 415 MDKSLLMFEDMTKQGVNPDIITFSTVISAF 444
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 165/375 (44%), Gaps = 20/375 (5%)
Query: 106 VVRSEHCF--LL--FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQT 161
VV H F L+ + LG DK L +F M KQ D +S +I+ + G+
Sbjct: 395 VVPDRHVFNTLINAYARLGMMDKSLL---MFEDMTKQ-GVNPDIITFSTVISAFCRLGRL 450
Query: 162 RLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV 221
AM F+ M ++G PD +VY+ LI + RD KA K L KG+ P +
Sbjct: 451 DDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKA--KELISDMLSKGI---PPPCI 505
Query: 222 TY--NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+ +I+ C + R + + + +H P++ T+N ++D Y G +KE +L
Sbjct: 506 KFFTSIINNLCKEGRVAEGKDVVDLIIHTG-QRPNLITFNSLVDGYCLVGNMKEAVGLLD 564
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
M+S +PDI T+N L+D Y K D +F+ ++H + T ++N ++ +AR
Sbjct: 565 SMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQAR 624
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVST 397
A+ +F +M S TY ++ G C N A + ++L + + T
Sbjct: 625 RTIVAKEMFHEMIESGMAVSIHTYATVLG--GLCRNNCTDEANMLLEKLFSMNVKFDILT 682
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
N ++ A G EA LF G+ P TY+++ K E L ME
Sbjct: 683 FNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSME 742
Query: 458 QNGIVPNKRFFLEAL 472
++ P+ R E +
Sbjct: 743 KSSCTPDSRILNEII 757
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 156/339 (46%), Gaps = 11/339 (3%)
Query: 129 LEVFRWMQKQRWYIADTGIYSK--LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+E+F+ M + A IY+ LI + + L + +F + +G PD YNAL
Sbjct: 171 VELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNAL 230
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I K + KA F KM+ + PN+VTY+ L+ + + +D+ + +++
Sbjct: 231 IDGF----SKEGEVDKAHDLFYKMEE-QGIMPNVVTYSSLINGLCKTKEMDKAERVLRQM 285
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
+ + P+ TYN ++ Y +GM KE V M S+ PD+ N + + K
Sbjct: 286 VGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRI 345
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ +F S++ KP + ++ +++ Y A + +F M P + +
Sbjct: 346 KEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTL 405
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I Y + ++ +F++++K G + + T + ++ A+C G +A F + + GV
Sbjct: 406 INAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGV 465
Query: 427 TPDSSTYKLLYKAYTKANMKELV--QKLLKRMEQNGIVP 463
PD++ Y L + + N ++LV ++L+ M GI P
Sbjct: 466 PPDTAVYSCLIQG--QCNRRDLVKAKELISDMLSKGIPP 502
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 157/361 (43%), Gaps = 14/361 (3%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
S W + + VF+ M + D G + + + K G+ + A +F M G +PD
Sbjct: 307 SGMWKESVRVFKEMSSS-LLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVI 365
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
Y AL LH A +A F M E P+ +N L+ A A+ +D+
Sbjct: 366 SYGAL----LHGYATAGCIAGMDNLFNVMV-CEGVVPDRHVFNTLINAYARLGMMDKSLL 420
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
+F+++ + + PDI T++ V+ A+ + G + + + M PD ++ LI
Sbjct: 421 MFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQC 480
Query: 302 KRQAFDKMEQVFKSLMHSK-EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
R+ K +++ ++ P + F S+I N K + + V + P+
Sbjct: 481 NRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNL 540
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
IT+ ++ Y N+ A + D + +G + + T N +++ YC +G +A LF +
Sbjct: 541 ITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRD 600
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLA 480
+ VT S +Y ++ +A + +++ M ++G+ ++ T+++ L
Sbjct: 601 MLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMA-------VSIHTYATVLG 653
Query: 481 G 481
G
Sbjct: 654 G 654
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 136/297 (45%), Gaps = 8/297 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL-HTRDKAKALAKALGY 206
Y+ LI G + ++ +F EM +S PD N+ +TA H R K +A
Sbjct: 297 YNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIK-----EARDI 351
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F M ++ KP++++Y LL A A + ++ LF + + PD + +N +++AY
Sbjct: 352 FDSMV-LKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYA 410
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+ GM+ + + M PDIITF+ +I ++ + D + F ++ + P
Sbjct: 411 RLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTA 470
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT-YECIITMYGYCDNVSRAREIFDE 385
++ +I R KA+ + M + P I + II V+ +++ D
Sbjct: 471 VYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDL 530
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+ G+ + T N++++ YC+ G EA L ++ ++GV PD TY L Y K
Sbjct: 531 IIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCK 587
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 135/309 (43%), Gaps = 8/309 (2%)
Query: 163 LAMWLFSEMRNSGC-RPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPN 219
LA+ LF M C P++Y I + + R + L L F ++ G+ P+
Sbjct: 169 LAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLG--LPVFGRLLRTGL---GPD 223
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+ +YN L+ ++ VD+ + LF ++ E + P++ TY+ +++ K + + E VL
Sbjct: 224 VFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLR 283
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
+M +P+ +T+N LI Y + + +VFK + S P + NS + K
Sbjct: 284 QMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHG 343
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLN 399
+A +F M P I+Y ++ Y ++ +F+ + G N
Sbjct: 344 RIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFN 403
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
++ AY G+ ++ L+FE+ GV PD T+ + A+ + + + M
Sbjct: 404 TLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDT 463
Query: 460 GIVPNKRFF 468
G+ P+ +
Sbjct: 464 GVPPDTAVY 472
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 115/254 (45%), Gaps = 11/254 (4%)
Query: 159 GQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKP 218
G + A+ L M + G PD YN L+ + K + AL F+ M +R
Sbjct: 554 GNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYC----KHGRIDDALTLFRDML-HKRVTL 608
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
V+YNI+L QAR +F E+ ES +A I+TY V+ +N E +L
Sbjct: 609 TSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLL 668
Query: 279 SRMKSNQCKPDIITFNLLIDS---YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
++ S K DI+TFN++I + G+RQ + +++F ++ PT+ T+ MI N
Sbjct: 669 EKLFSMNVKFDILTFNIVIRAMFKVGRRQ---EAKELFAAISTYGLVPTILTYRVMITNL 725
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
K A+ +F M TP II M V++A ++ K G +
Sbjct: 726 IKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEA 785
Query: 396 STLNAMLEAYCMNG 409
+T + ++ + +NG
Sbjct: 786 TTTSLLIYLFSVNG 799
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 51/121 (42%)
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P+ TY +I Y +F L + G V + NA+++ + G +A L
Sbjct: 187 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 246
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
F G+ P+ TY L K + +++L++M G+ PN + + +S+
Sbjct: 247 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 306
Query: 478 S 478
S
Sbjct: 307 S 307
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 161/338 (47%), Gaps = 11/338 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG-QTRLAMWLFSEMRN 173
L GKS + + ++VF M K + Y+ +I GK G + + + +F EM
Sbjct: 228 LISAYGKSGYFDEAIKVFESM-KVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLR 286
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACA 231
+G +PD YN+L+ + +R A+ L F +M +G+++ ++ TYN LL A
Sbjct: 287 NGVQPDRITYNSLLA--VCSRGGLWEAARNL--FNEMIDRGIDQ---DVFTYNTLLDAVC 339
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ +D + E+ + P++ TY+ + D Y K G +++ ++ + MK D +
Sbjct: 340 KGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRV 399
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
++N L+ Y K F+ +V K + S K + T+N+++ YGK + VF++M
Sbjct: 400 SYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEM 459
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+ P+ +TY +I +Y A E+F E + G V + ++ A C NGL
Sbjct: 460 KKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLV 519
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
A LL + G+ P+ TY + A+ ++ E +
Sbjct: 520 DSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFL 557
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 178/399 (44%), Gaps = 7/399 (1%)
Query: 65 RPRSKRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDK 124
RP+S + + + L +VL D LN K+ SE L ELG +
Sbjct: 106 RPKSSMTTRHSAIAEEVLHQVLQFGKDDASLDNILLNFESKLCGSEDYTFLLRELGNRGE 165
Query: 125 WLQCLEVFRWMQKQRWYIADTG-IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+ + F + + + G + S +I+ +G+ G+ LA +F + G +
Sbjct: 166 CWKAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAF 225
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR-NVDQVNAL 242
+ALI+A+ K+ +A+ F+ MK + KPN+VTYN ++ AC + +V +
Sbjct: 226 SALISAY----GKSGYFDEAIKVFESMK-VSGLKPNLVTYNAVIDACGKGGVEFKRVVEI 280
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
F+E+ + + PD TYN ++ + G+ + ++ + M D+ T+N L+D+ K
Sbjct: 281 FEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCK 340
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
D ++ + K P + T+++M Y KA A ++ +M + ++
Sbjct: 341 GGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVS 400
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y ++++Y A ++ E+ G V T NA+L+ Y G E +F+
Sbjct: 401 YNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMK 460
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
V P+ TY L Y+K ++ E ++ + +Q G+
Sbjct: 461 KDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGL 499
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 143/331 (43%), Gaps = 4/331 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+S LI+ GK G A+ +F M+ SG +P+ YNA+I A + + F
Sbjct: 225 FSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDA---CGKGGVEFKRVVEIF 281
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M +P+ +TYN LL C++ + LF E+ + + D++TYN ++DA K
Sbjct: 282 EEML-RNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCK 340
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + ++ M + P+++T++ + D Y K + ++ + +
Sbjct: 341 GGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVS 400
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N+++ Y K A V ++M + +TY ++ YG + +F E+
Sbjct: 401 YNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMK 460
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
K + T + +++ Y L EA +F G+ D Y L A K + +
Sbjct: 461 KDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVD 520
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
LL M + GI PN + ++ F S
Sbjct: 521 SAVLLLDEMTKEGIRPNVVTYNSIIDAFGRS 551
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 151/322 (46%), Gaps = 39/322 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+++ K G+ A+ + EM +SG + D YNAL+ + K + F
Sbjct: 401 YNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGY----GKQGKFNEVTRVF 456
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++MK +R PN++TY+ L+ ++ ++ +F+E ++ L D+ Y+ +++A K
Sbjct: 457 KEMK-KDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCK 515
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK----------------RQA----FD 307
NG++ +L M +P+++T+N +ID++G+ RQ+ F
Sbjct: 516 NGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLVDGVGASNERQSESPSFM 575
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIIN-YGKARLQ--GKAEY-----VFQKMTAMKYTPS 359
+E V +S ++ + + ++ G A+ + GK E VF+KM ++ P+
Sbjct: 576 LIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKERLGKEEIRSILSVFKKMHELEIKPN 635
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
+T+ I+ C ++ A + +EL +L + + +L + N + +A LF+
Sbjct: 636 VVTFSAILNACSRCKSIEDASMLLEEL-RLFDNQVYGVAHGLLMGFSEN-VWIQAQYLFD 693
Query: 420 NSHNMGVTPDSSTYKLLYKAYT 441
M DSST Y A T
Sbjct: 694 EVKQM----DSSTASAFYNALT 711
>gi|410110083|gb|AFV61121.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
cujabensis]
Length = 359
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 133/276 (48%), Gaps = 5/276 (1%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
D +YS LI + K A+ +FS ++ SG PD YNA+I KAK +
Sbjct: 2 GDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVF----GKAKLFRE 57
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A +MK PN +Y+ LL + + + ++F E+ E D+ T N ++
Sbjct: 58 ARSLISEMK-TXGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMI 116
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D YG+ GM KE + + M+ +P+++++N L+ YG + F + +F+ + +
Sbjct: 117 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 176
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
+ T+NSMI+ YGK KA + Q+M + P+ ITY II+++G + RA +
Sbjct: 177 QNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAML 236
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
F +L G ++ M+ AY GL A L
Sbjct: 237 FQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLL 272
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 129/263 (49%), Gaps = 1/263 (0%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+KA+ F ++K P++V YN ++ +A+ + +L E+ + P+ +Y+
Sbjct: 21 SKAISIFSRLK-RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTXGVMPNTTSYST 79
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ Y +N E SV S M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 80 LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 139
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P + ++N+++ YG A L G+A ++F+ M + +TY +I +YG +A
Sbjct: 140 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKAN 199
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ E+ G + T + ++ + G A +LF+ + GV D ++ + AY
Sbjct: 200 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY 259
Query: 441 TKANMKELVQKLLKRMEQNGIVP 463
+A + ++LL +++ +P
Sbjct: 260 ERAGLVAHAKRLLHELKRPDNIP 282
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 148/331 (44%), Gaps = 15/331 (4%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L SEM+ G P+ + Y+ L+T ++
Sbjct: 31 KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTXGVMPNTTSYSTLLTMYVEN--- 87
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
K +AL F +M+ + +C ++ T NI++ Q + + LF + + + P++
Sbjct: 88 -KKFLEALSVFSEMREI-KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVV 145
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+YN ++ YG + E + M+ + +++T+N +I YGK +K + + +
Sbjct: 146 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEM 205
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P T++++I +GK +A +FQK+ + I ++ +I Y V
Sbjct: 206 QSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLV 265
Query: 377 SRAREIFDELSK---LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ A+ + EL + + +D + L G EA +F + + G D + +
Sbjct: 266 AHAKRLLHELKRPDNIPRDTAIHILAGA-------GRIEEATYVFRQAIDAGEVKDITVF 318
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ + +K V ++ +M G P+
Sbjct: 319 ERMIHLLSKYKKYSNVVEVFDKMRGLGYFPD 349
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 119/250 (47%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
++V Y+ L+ + + + ++F L S PD+ YN +++ +GK + +E S++
Sbjct: 3 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 62
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
S MK+ P+ +++ L+ Y + + F + VF + K L T N MI YG+
Sbjct: 63 SEMKTXGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 122
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
+ +A+ +F M M P+ ++Y ++ +YG + A +F + + + V T
Sbjct: 123 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 182
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N+M+ Y +A+ L + + G+ P+S TY + + K + L +++
Sbjct: 183 NSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 242
Query: 459 NGIVPNKRFF 468
+G+ ++ F
Sbjct: 243 SGVEIDQILF 252
>gi|357448559|ref|XP_003594555.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483603|gb|AES64806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 153/345 (44%), Gaps = 30/345 (8%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
GK+ K + L +F+ M ++ + + Y+ +I + K A+ LFS+M +GC+P+
Sbjct: 269 GKAGKTDESLALFQAML-EKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPN 327
Query: 180 PSVYNALIT-----AHLHTRDKAKALAKA----------------LGY-------FQKMK 211
Y+ L+ L+ D ++K LG+ F M
Sbjct: 328 EFTYSVLLNVLVAEGQLNKLDNIVEMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLFCNMW 387
Query: 212 GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMI 271
+ K + Y +L + + + + L HE + D YN V A G+ +
Sbjct: 388 NVHD-KGDKDAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQV 446
Query: 272 KEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM 331
+ + +MK + PDI T+N+LI SYG+ D ++F+ L +S +P + ++NS+
Sbjct: 447 SHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSL 506
Query: 332 IINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGK 391
I GK +A F++M P +TY +I +G D V A +FDE+ G
Sbjct: 507 INCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGC 566
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+ T N +L+ +G EA L+ G+TPDS TY +L
Sbjct: 567 SPNLVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVL 611
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 159/384 (41%), Gaps = 40/384 (10%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K K + +VF M K+R DT Y+ +I + GK G+T ++ LF M
Sbjct: 228 MLLDALAKDQKVDKAYKVFEDM-KRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLE 286
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G + YN +I A K + KA+ F KM C+PN TY++LL
Sbjct: 287 KGFTLNLIAYNTMIEA----LAKGRMADKAVLLFSKMVE-NGCQPNEFTYSVLLNVLVAE 341
Query: 234 RNVDQVNALFKELHESILAPDIYTY--------------------------NGVMDAY-- 265
+++++ + E+ + + IY Y G DAY
Sbjct: 342 GQLNKLDNIV-EMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMS 400
Query: 266 -----GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
+G I E +L+R D I +N + + G+ + + +++ +
Sbjct: 401 MLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDG 460
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P + T+N +I +YG+A A +F+++ P I+Y +I G +V A
Sbjct: 461 PPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVISYNSLINCLGKNGDVDEAH 520
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
F E+ + G + V T + ++E + A LF+ G +P+ TY +L
Sbjct: 521 MRFKEMQEKGLNPDVVTYSTLIECFGKTDKVEMACSLFDEMIAEGCSPNLVTYNILLDCL 580
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
++ L +++Q G+ P+
Sbjct: 581 ERSGRTAEAVDLYAKLKQQGLTPD 604
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 144/356 (40%), Gaps = 46/356 (12%)
Query: 144 DTGIYSKLIAVMGKKG-QTRLAMW--LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
D IY++L + + Q R L +M G + S N LI D+ L
Sbjct: 120 DPFIYNRLFLTLSRSSSQLRFEQTESLLDDMEKRGVKGSISTVNILI-GFFGDLDRCVGL 178
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
K G + N +Y LL+ + R+ D+ ++ ++ + DI+ +N
Sbjct: 179 VKKWGL----------RFNAYSYKCLLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNM 228
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++DA K+ + + V MK C+PD T+ ++I GK D+ +F++++
Sbjct: 229 LLDALAKDQKVDKAYKVFEDMKRRHCEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKG 288
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM------YGYCD 374
L +N+MI K R+ KA +F KM P+ TY ++ + D
Sbjct: 289 FTLNLIAYNTMIEALAKGRMADKAVLLFSKMVENGCQPNEFTYSVLLNVLVAEGQLNKLD 348
Query: 375 NVSRA------REIFD----ELSKLGKDMKVSTL----------------NAMLEAYCMN 408
N+ ++I+ LSKLG + L +MLE+ C +
Sbjct: 349 NIVEMSKKYMNKQIYAYFVRTLSKLGHSSEAHRLFCNMWNVHDKGDKDAYMSMLESLCSS 408
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G EA L H +T D+ Y ++ A + + L ++M+Q+G P+
Sbjct: 409 GKIAEAIDLLNRFHEKCITTDTIMYNTVFTALGRLKQVSHIHDLYEKMKQDGPPPD 464
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 137/347 (39%), Gaps = 37/347 (10%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A ++ +M G D +N L+ A K + + KA F+ MK C+P+ TY
Sbjct: 207 AFGVYLDMLRCGYSLDIFAFNMLLDA----LAKDQKVDKAYKVFEDMK-RRHCEPDTFTY 261
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
I++R +A D+ ALF+ + E ++ YN +++A K M + + S+M
Sbjct: 262 TIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKAVLLFSKMVE 321
Query: 284 NQCKPDIITFNLLID-------------------SYGKRQAFDKMEQVFKSLMHSKEKPT 324
N C+P+ T+++L++ Y +Q + + L HS E
Sbjct: 322 NGCQPNEFTYSVLLNVLVAEGQLNKLDNIVEMSKKYMNKQIYAYFVRTLSKLGHSSEAHR 381
Query: 325 L-------------PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
L + SM+ + + +A + + T I Y + T G
Sbjct: 382 LFCNMWNVHDKGDKDAYMSMLESLCSSGKIAEAIDLLNRFHEKCITTDTIMYNTVFTALG 441
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
VS ++++++ + G + T N ++ +Y G A +FE N PD
Sbjct: 442 RLKQVSHIHDLYEKMKQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENSNCQPDVI 501
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+Y L K + K M++ G+ P+ + +E F +
Sbjct: 502 SYNSLINCLGKNGDVDEAHMRFKEMQEKGLNPDVVTYSTLIECFGKT 548
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 93/184 (50%), Gaps = 10/184 (5%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+F LG+ + +++ M KQ D Y+ LI+ G+ G+ A+ +F E+ NS
Sbjct: 436 VFTALGRLKQVSHIHDLYEKM-KQDGPPPDIFTYNILISSYGRAGRVDSAVKIFEELENS 494
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQ 232
C+PD YN+LI D +A + F++M KG+ P++VTY+ L+ +
Sbjct: 495 NCQPDVISYNSLINCLGKNGDVDEAHMR----FKEMQEKGL---NPDVVTYSTLIECFGK 547
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
V+ +LF E+ +P++ TYN ++D ++G E + +++K PD IT
Sbjct: 548 TDKVEMACSLFDEMIAEGCSPNLVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSIT 607
Query: 293 FNLL 296
+ +L
Sbjct: 608 YAVL 611
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 78/195 (40%), Gaps = 6/195 (3%)
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
++ ES+L M+ K I T N+LI +G D+ + K + ++
Sbjct: 140 FEQTESLLDDMEKRGVKGSISTVNILIGFFGD---LDRCVGLVKKW---GLRFNAYSYKC 193
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
++ Y + R KA V+ M Y+ + ++ V +A ++F+++ +
Sbjct: 194 LLQGYLRLRDCDKAFGVYLDMLRCGYSLDIFAFNMLLDALAKDQKVDKAYKVFEDMKRRH 253
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
+ T M+ G E+ LF+ G T + Y + +A K M +
Sbjct: 254 CEPDTFTYTIMIRMTGKAGKTDESLALFQAMLEKGFTLNLIAYNTMIEALAKGRMADKAV 313
Query: 451 KLLKRMEQNGIVPNK 465
L +M +NG PN+
Sbjct: 314 LLFSKMVENGCQPNE 328
>gi|224124604|ref|XP_002319373.1| predicted protein [Populus trichocarpa]
gi|222857749|gb|EEE95296.1| predicted protein [Populus trichocarpa]
Length = 810
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 164/368 (44%), Gaps = 42/368 (11%)
Query: 145 TGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKAL 204
T Y+ LI + GK G+ + A +FSEM SG D +N +I T L++A
Sbjct: 132 TSTYNTLIDLYGKAGRLKDAAEVFSEMLKSGVAMDTITFNTMI----FTCGSHGLLSEAE 187
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
KM+ R P+ TYNI L A A N++ + ++ L PDI ++ ++
Sbjct: 188 SLLDKME-ERRISPDTRTYNIFLSLYADAGNINAALECYWKIRNVGLVPDIVSHRTILHI 246
Query: 265 YGKNGMIKEMESVLSRMKSNQCK------PDIITF-----------NLL----------- 296
M++E+E+V+ MK + K P II NLL
Sbjct: 247 LCGRNMVREVEAVIEEMKKSSQKIDVHSVPGIIKMYINEGLHDRANNLLDKCQFDVGFSS 306
Query: 297 ------IDSYGKRQAFDKMEQVF--KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
ID+Y +R + + E VF K + EK L +N M+ YGKA+L KA +F
Sbjct: 307 KVRAAIIDAYAERGLWAEAEAVFYGKRDLLGPEKGVLE-YNVMVKAYGKAKLYDKAFSLF 365
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
+ M P +TY +I M+ D + +AR++ DE+ + G + T +A++ Y
Sbjct: 366 KGMRNHGTWPDEVTYNSLIQMFSGGDLMDQARDLLDEMQEAGFKPQCLTFSAVMACYARL 425
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G ++A +++ GV P+ Y L + + E K + ME++GI N+
Sbjct: 426 GQLSDAVDVYQEMVKAGVKPNEVVYGSLINGFAEVGNVEEALKYFRMMEESGIPANQIVL 485
Query: 469 LEALETFS 476
++ +S
Sbjct: 486 TSLIKVYS 493
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 142/332 (42%), Gaps = 15/332 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR----PDPSV--YNALITAHLHTRDKA 197
D G SK+ A + R +W +E G R P+ V YN ++ A+ KA
Sbjct: 301 DVGFSSKVRAAIIDAYAER-GLWAEAEAVFYGKRDLLGPEKGVLEYNVMVKAY----GKA 355
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
K KA F+ M+ P+ VTYN L++ + +DQ L E+ E+ P T
Sbjct: 356 KLYDKAFSLFKGMRN-HGTWPDEVTYNSLIQMFSGGDLMDQARDLLDEMQEAGFKPQCLT 414
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
++ VM Y + G + + V M KP+ + + LI+ + + ++ + F+ +
Sbjct: 415 FSAVMACYARLGQLSDAVDVYQEMVKAGVKPNEVVYGSLINGFAEVGNVEEALKYFRMME 474
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
S S+I Y K A+++++KM ++ P I +I++Y +S
Sbjct: 475 ESGIPANQIVLTSLIKVYSKLGCFDGAKHLYKKMKDLEGGPDIIASNSMISLYADLGMIS 534
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
A +F L + G+ VS M+ Y G+ EA + E G+ D +Y +
Sbjct: 535 EAELVFKNLRENGQADGVS-FATMMYLYKSMGMLDEAIDIAEEMKQSGLLRDCVSYNKVM 593
Query: 438 KAY-TKANMKELVQKLLKRMEQNGIVPNKRFF 468
Y T ++E + LL M ++P+ F
Sbjct: 594 ACYATNGQLRECAE-LLHEMIGQKLLPDGGTF 624
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/386 (18%), Positives = 157/386 (40%), Gaps = 36/386 (9%)
Query: 108 RSEHCFL-LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMW 166
R+ + FL L+ + G + L+C W + + D + ++ ++ + R
Sbjct: 203 RTYNIFLSLYADAGNINAALECY----WKIRNVGLVPDIVSHRTILHILCGRNMVREVEA 258
Query: 167 LFSEMRNSGCRPD----PSVYNALITAHLHTR---------------DKAKAL------- 200
+ EM+ S + D P + I LH R K +A
Sbjct: 259 VIEEMKKSSQKIDVHSVPGIIKMYINEGLHDRANNLLDKCQFDVGFSSKVRAAIIDAYAE 318
Query: 201 ----AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
A+A F + + + ++ YN++++A +A+ D+ +LFK + PD
Sbjct: 319 RGLWAEAEAVFYGKRDLLGPEKGVLEYNVMVKAYGKAKLYDKAFSLFKGMRNHGTWPDEV 378
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TYN ++ + ++ + +L M+ KP +TF+ ++ Y + V++ +
Sbjct: 379 TYNSLIQMFSGGDLMDQARDLLDEMQEAGFKPQCLTFSAVMACYARLGQLSDAVDVYQEM 438
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+ + KP + S+I + + +A F+ M + I +I +Y
Sbjct: 439 VKAGVKPNEVVYGSLINGFAEVGNVEEALKYFRMMEESGIPANQIVLTSLIKVYSKLGCF 498
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
A+ ++ ++ L + N+M+ Y G+ +EA+L+F+N G D ++ +
Sbjct: 499 DGAKHLYKKMKDLEGGPDIIASNSMISLYADLGMISEAELVFKNLRENG-QADGVSFATM 557
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIV 462
Y M + + + M+Q+G++
Sbjct: 558 MYLYKSMGMLDEAIDIAEEMKQSGLL 583
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 149/366 (40%), Gaps = 43/366 (11%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+S ++A + GQ A+ ++ EM +G +P+ VY +LI + + +AL YF
Sbjct: 415 FSAVMACYARLGQLSDAVDVYQEMVKAGVKPNEVVYGSLINGFAEVGN----VEEALKYF 470
Query: 208 QKMKGMERCKP-NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+ M+ E P N + L++ ++ D L+K++ + PDI N ++ Y
Sbjct: 471 RMME--ESGIPANQIVLTSLIKVYSKLGCFDGAKHLYKKMKDLEGGPDIIASNSMISLYA 528
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
GMI E E V ++ N + D ++F ++ Y D+ + + + S
Sbjct: 529 DLGMISEAELVFKNLRENG-QADGVSFATMMYLYKSMGMLDEAIDIAEEMKQSGLLRDCV 587
Query: 327 TFNSMIINYG-KARLQGKAEYVFQKMTAMKYTPSFITYECIITMY--------------- 370
++N ++ Y +L+ AE + +M K P T++ + T+
Sbjct: 588 SYNKVMACYATNGQLRECAE-LLHEMIGQKLLPDGGTFKILFTVLKKGGFPSEGIAQLES 646
Query: 371 GYCDNVSRARE-----IF-------------DELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
Y + AR+ IF + +K + N + AY +G
Sbjct: 647 AYLEGKPYARQAVITSIFSVVGLHALALESCESFTKAEVALDSFAYNVAIYAYGSSGEID 706
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
+A F + G+ PD T L Y KA M E V+++ +++ I PN +
Sbjct: 707 KALKTFMKRQDEGLEPDLVTSINLVHCYGKAGMVEGVKRIYSQLKYGEIKPNDSLVKAVV 766
Query: 473 ETFSSS 478
+ + ++
Sbjct: 767 DAYKNA 772
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 98/234 (41%), Gaps = 27/234 (11%)
Query: 253 PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
P TY ++D Y K G+++ + + M+ PD +T N ++ FDK E+
Sbjct: 8 PTNNTYGMLVDVYAKAGLVEALLWI-KHMRLRGLFPDEVTMNTVVKVLKDVGEFDKAERF 66
Query: 313 FKSLMHSKEKPTLPTFNSMI----------INY------------GKARLQGKAEYVFQK 350
+K + + +SM+ +++ G+ ++ G ++ +
Sbjct: 67 YKDWCAGRVELDGLELDSMLDSENGSRSEPVSFKHFLLTELFKTGGRVKIGGSSD----E 122
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
T ++ TY +I +YG + A E+F E+ K G M T N M+ +GL
Sbjct: 123 ETLVRKPCLTSTYNTLIDLYGKAGRLKDAAEVFSEMLKSGVAMDTITFNTMIFTCGSHGL 182
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+EA+ L + ++PD+ TY + Y A + ++ G+VP+
Sbjct: 183 LSEAESLLDKMEERRISPDTRTYNIFLSLYADAGNINAALECYWKIRNVGLVPD 236
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 100/241 (41%), Gaps = 19/241 (7%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L++ +G D+ + E KQ + D Y+K++A GQ R L EM
Sbjct: 560 LYKSMGMLDEAIDIAEEM----KQSGLLRDCVSYNKVMACYATNGQLRECAELLHEMIGQ 615
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
PD + L T ++ +A+ + ++G + ++T
Sbjct: 616 KLLPDGGTFKILFTVLKKGGFPSEGIAQLESAY--LEGKPYARQAVIT---------SIF 664
Query: 235 NVDQVNALFKELHESI----LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
+V ++AL E ES +A D + YN + AYG +G I + + + +PD+
Sbjct: 665 SVVGLHALALESCESFTKAEVALDSFAYNVAIYAYGSSGEIDKALKTFMKRQDEGLEPDL 724
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
+T L+ YGK + +++++ L + + KP +++ Y A AE V Q
Sbjct: 725 VTSINLVHCYGKAGMVEGVKRIYSQLKYGEIKPNDSLVKAVVDAYKNANRHDLAELVNQD 784
Query: 351 M 351
+
Sbjct: 785 I 785
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 161/338 (47%), Gaps = 11/338 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG-QTRLAMWLFSEMRN 173
L GKS + + ++VF M K + Y+ +I GK G + + + +F EM
Sbjct: 228 LISAYGKSGYFDEAIKVFESM-KVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLR 286
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACA 231
+G +PD YN+L+ + +R A+ L F +M +G+++ ++ TYN LL A
Sbjct: 287 NGVQPDRITYNSLLA--VCSRGGLWEAARNL--FNEMIDRGIDQ---DVFTYNTLLDAVC 339
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ +D + E+ + P++ TY+ + D Y K G +++ ++ + MK D +
Sbjct: 340 KGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRV 399
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
++N L+ Y K F+ +V K + S K + T+N+++ YGK + VF++M
Sbjct: 400 SYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEM 459
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+ P+ +TY +I +Y A E+F E + G V + ++ A C NGL
Sbjct: 460 KKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLV 519
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
A LL + G+ P+ TY + A+ ++ E +
Sbjct: 520 DSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFL 557
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 178/399 (44%), Gaps = 7/399 (1%)
Query: 65 RPRSKRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDK 124
RP+S + + + L +VL D LN K+ SE L ELG +
Sbjct: 106 RPKSSMTTRHSAIAEEVLHQVLQFGKDDASLDNILLNFESKLCGSEDYTFLLRELGNRGE 165
Query: 125 WLQCLEVFRWMQKQRWYIADTG-IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+ + F + + + G + S +I+ +G+ G+ LA +F + G +
Sbjct: 166 CWKAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAF 225
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR-NVDQVNAL 242
+ALI+A+ K+ +A+ F+ MK + KPN+VTYN ++ AC + +V +
Sbjct: 226 SALISAY----GKSGYFDEAIKVFESMK-VSGLKPNLVTYNAVIDACGKGGVEFKRVVEI 280
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
F+E+ + + PD TYN ++ + G+ + ++ + M D+ T+N L+D+ K
Sbjct: 281 FEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCK 340
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
D ++ + K P + T+++M Y KA A ++ +M + ++
Sbjct: 341 GGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVS 400
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y ++++Y A ++ E+ G V T NA+L+ Y G E +F+
Sbjct: 401 YNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMK 460
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
V P+ TY L Y+K ++ E ++ + +Q G+
Sbjct: 461 KDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGL 499
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 143/331 (43%), Gaps = 4/331 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+S LI+ GK G A+ +F M+ SG +P+ YNA+I A + + F
Sbjct: 225 FSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDA---CGKGGVEFKRVVEIF 281
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M +P+ +TYN LL C++ + LF E+ + + D++TYN ++DA K
Sbjct: 282 EEML-RNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCK 340
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + ++ M + P+++T++ + D Y K + ++ + +
Sbjct: 341 GGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVS 400
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N+++ Y K A V ++M + +TY ++ YG + +F E+
Sbjct: 401 YNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMK 460
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
K + T + +++ Y L EA +F G+ D Y L A K + +
Sbjct: 461 KDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVD 520
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
LL M + GI PN + ++ F S
Sbjct: 521 SAVLLLDEMTKEGIRPNVVTYNSIIDAFGRS 551
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 149/322 (46%), Gaps = 39/322 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+++ K G+ A+ + EM +SG + D YNAL+ + K + F
Sbjct: 401 YNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGY----GKQGKFNEVTRVF 456
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++MK +R PN++TY+ L+ ++ ++ +F+E ++ L D+ Y+ +++A K
Sbjct: 457 KEMK-KDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCK 515
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM-EQVFKSLMHSKEKPT-- 324
NG++ +L M +P+++T+N +ID++G+ + + + V S E PT
Sbjct: 516 NGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLVDGVGASNERQSESPTFM 575
Query: 325 -LPTFNSMIINY-----------------GKARLQ--GKAEY-----VFQKMTAMKYTPS 359
+ + IN+ G A+ + GK E VF+KM ++ P+
Sbjct: 576 LIEGVDESEINWDDGHVFKFYQQLVSEKEGPAKKERLGKEEIRSILSVFKKMHELEIKPN 635
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
+T+ I+ C ++ A + +EL +L + + +L + N + +A LF+
Sbjct: 636 VVTFSAILNACSRCKSIEDASMLLEEL-RLFDNQVYGVAHGLLMGFSEN-VWIQAQYLFD 693
Query: 420 NSHNMGVTPDSSTYKLLYKAYT 441
M DSST Y A T
Sbjct: 694 EVKQM----DSSTASAFYNALT 711
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 167/349 (47%), Gaps = 8/349 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
++ ++G+S W + L++ M+ + D S +I+ G++G A F E+++S
Sbjct: 276 VYGKMGRS--WDKILDLLDEMRNEGLQF-DEFTCSTVISACGREGLINEAKEFFVELKSS 332
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P YNAL L KA ++AL ++M+ C + VTYN L+ A +A
Sbjct: 333 GYEPGTVTYNAL----LQVFGKAGIYSEALNILKEMED-NNCTLDSVTYNELVAAYVRAG 387
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
++ + + + P+ TY V++AYG+ G + + ++MK + C P++ T+N
Sbjct: 388 FYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYN 447
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++ GK+ ++M ++ + + P T+N+++ G +VF++M
Sbjct: 448 SILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNC 507
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ P T+ +I+ YG C + A +++DE+ K G +T NA+L A G A
Sbjct: 508 GFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAA 567
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
+ + + N G P+ +++ L+ Y K ++++ K + I P
Sbjct: 568 ESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFP 616
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 141/319 (44%), Gaps = 7/319 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ L+A+ G KG+ + +F EM+N G P +N LI+A+ L A Y
Sbjct: 481 WNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRC---GSELDAAKMYD 537
Query: 208 QKMK-GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+ MK G C TYN LL A A+ + ++ ++ P+ +++ ++ Y
Sbjct: 538 EMMKAGFTPCA---TTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYA 594
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K G ++ +E + + Q P + LI + K +A ME+ F+ LM + KP +
Sbjct: 595 KGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMV 654
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
FNSM+ + K + +A+ + + P +TY ++ MY +A EI L
Sbjct: 655 IFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGL 714
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
K G+ + + N +++ +C GL EA + G+ P TY Y M
Sbjct: 715 IKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYNTFVSGYAGRGMF 774
Query: 447 ELVQKLLKRMEQNGIVPNK 465
V +++ M Q PN+
Sbjct: 775 AEVDEVISYMIQKNCKPNE 793
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 151/369 (40%), Gaps = 52/369 (14%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K Y T Y+ L+ V GK G A+ + EM ++ C D YN L+ A++
Sbjct: 330 KSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRA--- 386
Query: 197 AKALAKALGYFQK----MKGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
G++++ + M R PN VTY ++ A +A + LF ++ +S
Sbjct: 387 --------GFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSG 438
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
P++ TYN ++ GK +EM +LS M+ N C P+ IT+N L+ G + +
Sbjct: 439 CVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVN 498
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
VF+ + + +P TFN++I YG+ + A ++ +M +TP TY ++
Sbjct: 499 HVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNAL 558
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG-----------------LPTE 413
+ A + ++ G ++ + ML Y G P+
Sbjct: 559 ARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSW 618
Query: 414 ADL------------------LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
L FE G PD + + + K NM E QK+L
Sbjct: 619 VLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDL 678
Query: 456 MEQNGIVPN 464
+ ++G+ P+
Sbjct: 679 IRESGLQPD 687
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 194/439 (44%), Gaps = 52/439 (11%)
Query: 63 WTRPRSKRGRKSEELESKEL-VRVLMRS--------FSDKEPLVRTLNKYVKVVRSEHCF 113
W S G + ++ EL +R+L R DK P+ +KY VR+ C
Sbjct: 183 WVVSNSVSGDVKLDSKAVELMIRILGRESKYSIALKLLDKIPI----DKYSLDVRA--CT 236
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI------YSKLIAVMGKKGQTRLAMW- 166
+ ++ K+ Q + +F M+ D G+ Y+ ++ V GK G++ W
Sbjct: 237 TILHAYSRNGKYKQAIAMFERMK-------DCGLSPSLVTYNVMLDVYGKMGRS----WD 285
Query: 167 ----LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK--GMERCKPNI 220
L EMRN G + D + +I+A + + +A +F ++K G E P
Sbjct: 286 KILDLLDEMRNEGLQFDEFTCSTVISAC----GREGLINEAKEFFVELKSSGYE---PGT 338
Query: 221 VTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSR 280
VTYN LL+ +A + + KE+ ++ D TYN ++ AY + G +E +V+
Sbjct: 339 VTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDT 398
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
M P+ +T+ +I++YG+ K Q+F + S P + T+NS++ GK
Sbjct: 399 MTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGK--- 455
Query: 341 QGKAEYVFQKMTAMKYT---PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
+ ++E + + ++ M+ P+ IT+ ++ M G +F E+ G + T
Sbjct: 456 KSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDT 515
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
N ++ AY G +A +++ G TP ++TY L A + + + +L M
Sbjct: 516 FNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMR 575
Query: 458 QNGIVPNKRFFLEALETFS 476
G PN+ F L ++
Sbjct: 576 NKGFKPNETSFSLMLHCYA 594
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 145/315 (46%), Gaps = 10/315 (3%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
VFR M K + ++ LI+ G+ G A ++ EM +G P + YNAL+ A
Sbjct: 500 VFREM-KNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNA- 557
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
L R KA A+++ + KG KPN +++++L A+ NV + + K++++
Sbjct: 558 LARRGDWKA-AESVLLDMRNKGF---KPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQ 613
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
+ P ++ A K ++ ME + N KPD++ FN ++ + K +++ +
Sbjct: 614 IFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQ 673
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
++ + S +P L T+NS++ Y + KAE + + + +P ++Y II
Sbjct: 674 KMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIK-- 731
Query: 371 GYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
G+C + A + E++ G + T N + Y G+ E D + P
Sbjct: 732 GFCRQGLMQEAIRVMSEMTTRGICPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQKNCKP 791
Query: 429 DSSTYKLLYKAYTKA 443
+ TYK++ Y KA
Sbjct: 792 NELTYKIIVDGYCKA 806
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 89/176 (50%), Gaps = 10/176 (5%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRD--KAK 198
Y D I++ ++++ K A + +R SG +PD YN+L+ + + KA+
Sbjct: 649 YKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAE 708
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
+ K L +K E P++V+YN +++ + + + + E+ + P I+TY
Sbjct: 709 EILKGL-----IKSGE--SPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTY 761
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF-DKMEQVF 313
N + Y GM E++ V+S M CKP+ +T+ +++D Y K + + D M+ +F
Sbjct: 762 NTFVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYCKARKYQDAMDFIF 817
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 92/185 (49%), Gaps = 12/185 (6%)
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER---CKPNIVTYN 224
F E+ +G +PD ++N++++ +A QKM + R +P++VTYN
Sbjct: 641 FEELMKNGYKPDMVIFNSMLSIFAKNNMYERA--------QKMLDLIRESGLQPDLVTYN 692
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
L+ A+ + + K L +S +PD+ +YN ++ + + G+++E V+S M +
Sbjct: 693 SLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTR 752
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR-LQGK 343
P I T+N + Y R F ++++V ++ KP T+ ++ Y KAR Q
Sbjct: 753 GICPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYCKARKYQDA 812
Query: 344 AEYVF 348
+++F
Sbjct: 813 MDFIF 817
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 108/277 (38%), Gaps = 37/277 (13%)
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG-MIKEMESVLSRMKS 283
I L A D +NALF + +L DI + +D GK+ I E V+S S
Sbjct: 131 ICLLNSIAAEPFDSLNALFDSVKSELLEVDIVSLLKALDVLGKSERAILLFEWVVSNSVS 190
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
K D L+I G+ + ++ + K + +++ Y + +
Sbjct: 191 GDVKLDSKAVELMIRILGRESKYSIALKLLDKIPIDKYSLDVRACTTILHAYSRNGKYKQ 250
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYG--------------------------YCDNV- 376
A +F++M +PS +TY ++ +YG C V
Sbjct: 251 AIAMFERMKDCGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVI 310
Query: 377 ---------SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
+ A+E F EL G + T NA+L+ + G+ +EA + + + T
Sbjct: 311 SACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCT 370
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
DS TY L AY +A E ++ M + G++PN
Sbjct: 371 LDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPN 407
>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 830
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 170/353 (48%), Gaps = 14/353 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
++ ++G+S W + LE+ M+ + D S +I+ G++G A +E++ +
Sbjct: 260 VYGKMGRS--WGRILELLDEMRSKGLEF-DEFTCSTVISACGREGMLDEARKFLAELKLN 316
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G +P +YN++ L KA +AL ++M+ C P+ +TYN L +A
Sbjct: 317 GYKPGTVMYNSM----LQVFGKAGIYTEALSILKEMED-NNCPPDSITYNELAATYVRAG 371
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+D+ A+ + + P+ TY V+DAYGK G + + S+MK C P++ T+N
Sbjct: 372 FLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYN 431
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++ GK+ + + +V + + P T+N+M+ +GK YV + + M
Sbjct: 432 SVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTML---AVCSEEGKHNYVNKVLREM 488
Query: 355 K---YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
K + P T+ +I+ Y C + + +++ E+ K G V+T NA+L A G
Sbjct: 489 KNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDW 548
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A+ + ++ G P+ ++Y LL Y+KA ++K+ K + + P+
Sbjct: 549 KAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPS 601
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 138/318 (43%), Gaps = 5/318 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ ++AV ++G+ + EM+N G PD +N LI+++ + + AK G
Sbjct: 465 WNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDS-AKMYGEM 523
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K G C + TYN LL A A + ++ +++ P+ +Y+ ++ Y K
Sbjct: 524 VK-SGFTPC---VTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSK 579
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G ++ +E V + Q P I L+ S K + ME+ F L KP L
Sbjct: 580 AGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLVV 639
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
NSM+ + + ++ KA + + P+ TY C++ +Y D +A E+ +
Sbjct: 640 INSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLKGIQ 699
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ V + N +++ +C GL EA + G+ P TY Y + +
Sbjct: 700 NSVPEPDVVSYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAGMELFD 759
Query: 448 LVQKLLKRMEQNGIVPNK 465
++++ M ++ P++
Sbjct: 760 EANEVIRFMIEHNCRPSE 777
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 148/336 (44%), Gaps = 14/336 (4%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
+V R M K + D ++ LI+ + G + ++ EM SG P + YNAL+ A
Sbjct: 483 KVLREM-KNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNA 541
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
H R KA + Q KG KPN +Y++LL ++A NV + + KE+++
Sbjct: 542 LAH-RGDWKAAESVIQDMQT-KGF---KPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDG 596
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+ P ++ + K ++ ME +++ KPD++ N ++ + + + F K
Sbjct: 597 QVFPSWILLRTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKA 656
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
++ + +P L T+N ++ Y + KAE V + + P ++Y +I
Sbjct: 657 REMLHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLKGIQNSVPEPDVVSYNTVIK- 715
Query: 370 YGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD--LLFENSHNMG 425
G+C + A + E++ G + T N L Y L EA+ + F HN
Sbjct: 716 -GFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHN-- 772
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
P TYK+L Y KA E + ++++ I
Sbjct: 773 CRPSELTYKILVDGYCKAGKHEEAMDFVTKIKEIDI 808
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 1/254 (0%)
Query: 213 MERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM-I 271
+E+ ++ Y +L A A++ + LF ++ L P + TYN ++D YGK G
Sbjct: 209 VEKYSLDVRAYTTILHAYARSGKYKRAIDLFDKMEGIGLDPTLVTYNVMLDVYGKMGRSW 268
Query: 272 KEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM 331
+ +L M+S + D T + +I + G+ D+ + L + KP +NSM
Sbjct: 269 GRILELLDEMRSKGLEFDEFTCSTVISACGREGMLDEARKFLAELKLNGYKPGTVMYNSM 328
Query: 332 IINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGK 391
+ +GKA + +A + ++M P ITY + Y + + D ++ G
Sbjct: 329 LQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGV 388
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
T +++AY G +A LF ++G P+ TY + K + E V K
Sbjct: 389 MPNAITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIK 448
Query: 452 LLKRMEQNGIVPNK 465
+L M+ NG PN+
Sbjct: 449 VLCEMKLNGCAPNR 462
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 75/182 (41%), Gaps = 1/182 (0%)
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
L++ G+ ++F + K + + +++ Y ++ +A +F KM +
Sbjct: 186 LMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHAYARSGKYKRAIDLFDKMEGI 245
Query: 355 KYTPSFITYECIITMYGYCD-NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P+ +TY ++ +YG + R E+ DE+ G + T + ++ A G+ E
Sbjct: 246 GLDPTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTCSTVISACGREGMLDE 305
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
A G P + Y + + + KA + +LK ME N P+ + E
Sbjct: 306 ARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELAA 365
Query: 474 TF 475
T+
Sbjct: 366 TY 367
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 1/149 (0%)
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
M+ G+ A +F + KY+ Y I+ Y RA ++FD++ +G
Sbjct: 187 MVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHAYARSGKYKRAIDLFDKMEGIG 246
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADL-LFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
D + T N ML+ Y G L L + + G+ D T + A + M +
Sbjct: 247 LDPTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTCSTVISACGREGMLDEA 306
Query: 450 QKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+K L ++ NG P + L+ F +
Sbjct: 307 RKFLAELKLNGYKPGTVMYNSMLQVFGKA 335
>gi|242054883|ref|XP_002456587.1| hypothetical protein SORBIDRAFT_03g038900 [Sorghum bicolor]
gi|241928562|gb|EES01707.1| hypothetical protein SORBIDRAFT_03g038900 [Sorghum bicolor]
Length = 655
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 168/379 (44%), Gaps = 55/379 (14%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT---RDKAKAL 200
D ++S LI + + G A+ LFS +R +G RPD YNA + A+ + RD + L
Sbjct: 189 DLILFSNLIHLALRGGDAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSDLIRDAKRLL 248
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQ-ARNVDQVNALFKELHE-SILAPDIYTY 258
M + P+ TY+ +L A A+ R++ V+ LF + + + PD+ +
Sbjct: 249 ------LHDMPA-DGVAPDAETYSPILAALARRGRHLAAVS-LFSHMRAVARVKPDLSVF 300
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N +++AYG+ + +E + + M+ P ++T+N ++ YG F + +F LM
Sbjct: 301 NIILNAYGQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLF-DLMR 359
Query: 319 SKE----------KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
S KP + T+N+MI YGK+ KA + Q M A+ P ITY I++
Sbjct: 360 SASDGNGGAGSSVKPNVVTYNTMIAIYGKSLEDEKAGKLVQDMQAIGVQPDAITYSTILS 419
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA-----DL------- 416
++ + RA ++F++L + G ++ M+ AY GL ++A DL
Sbjct: 420 IWVKAGKLDRAAKLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQAKRLLRDLKDPEGIP 479
Query: 417 -------------------LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
LF + N G DSS ++ + Y K V ++ M
Sbjct: 480 KETAIKILASAGRLEEAAWLFRRAANTGEIKDSSVHRAMMDLYAKNRRHRNVIEVFDEMR 539
Query: 458 QNGIVPNKRFFLEALETFS 476
+ G +P+ A+ +
Sbjct: 540 KLGQLPDSETIATAMNAYG 558
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 155/340 (45%), Gaps = 16/340 (4%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
++R D YS L+A + + G A+ M + PD +++ LI L D
Sbjct: 147 RERGVTPDAFSYSTLLAALTRAGHLDHALTFLPLMEDDAVAPDLILFSNLIHLALRGGDA 206
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDI 255
KALA F +++ +P++ YN + A C D L ++ +APD
Sbjct: 207 PKALA----LFSRLRAAG-IRPDLKAYNAAVAAYCKSDLIRDAKRLLLHDMPADGVAPDA 261
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKS-NQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
TY+ ++ A + G S+ S M++ + KPD+ FN+++++YG+ + +++F
Sbjct: 262 ETYSPILAALARRGRHLAAVSLFSHMRAVARVKPDLSVFNIILNAYGQLDLAREADRLFW 321
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM---------TAMKYTPSFITYEC 365
S+ + P++ T+N+M+ YG A L G+A ++F M P+ +TY
Sbjct: 322 SMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMRSASDGNGGAGSSVKPNVVTYNT 381
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+I +YG +A ++ ++ +G T + +L + G A LFE G
Sbjct: 382 MIAIYGKSLEDEKAGKLVQDMQAIGVQPDAITYSTILSIWVKAGKLDRAAKLFEKLREAG 441
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
D Y+ + AY +A + ++LL+ ++ +P +
Sbjct: 442 TEIDPVLYQTMVVAYERAGLVSQAKRLLRDLKDPEGIPKE 481
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 118/282 (41%), Gaps = 11/282 (3%)
Query: 221 VTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSR 280
+ YN+LLR+ +A ++ + L E+ E + PD ++Y+ ++ A + G + + L
Sbjct: 121 IPYNLLLRSSCRAGDLRLASGLLLEMRERGVTPDAFSYSTLLAALTRAGHLDHALTFLPL 180
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
M+ + PD+I F+ LI + K +F L + +P L +N+ + Y K+ L
Sbjct: 181 MEDDAVAPDLILFSNLIHLALRGGDAPKALALFSRLRAAGIRPDLKAYNAAVAAYCKSDL 240
Query: 341 QGKAE-YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGK-DMKVSTL 398
A+ + M A P TY I+ A +F + + + +S
Sbjct: 241 IRDAKRLLLHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAVARVKPDLSVF 300
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM-- 456
N +L AY L EAD LF + GV P TY + + Y A + L M
Sbjct: 301 NIILNAYGQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFDLMRS 360
Query: 457 --EQNG-----IVPNKRFFLEALETFSSSLAGSQSGSAKTDL 491
+ NG + PN + + + SL ++G D+
Sbjct: 361 ASDGNGGAGSSVKPNVVTYNTMIAIYGKSLEDEKAGKLVQDM 402
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 80/173 (46%), Gaps = 9/173 (5%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS ++++ K G+ A LF ++R +G DP +Y ++ A+ ++A +++A
Sbjct: 410 DAITYSTILSIWVKAGKLDRAAKLFEKLREAGTEIDPVLYQTMVVAY----ERAGLVSQA 465
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ +K P + ++ A A +++ LF+ + D + +MD
Sbjct: 466 KRLLRDLK-----DPEGIPKETAIKILASAGRLEEAAWLFRRAANTGEIKDSSVHRAMMD 520
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
Y KN + + V M+ PD T +++YGK + FDK +++++
Sbjct: 521 LYAKNRRHRNVIEVFDEMRKLGQLPDSETIATAMNAYGKLKDFDKAAALYQAM 573
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 159/364 (43%), Gaps = 10/364 (2%)
Query: 115 LFEELGKSDKWLQCLEVF-RWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+ L S K + +EV R MQ++ + D Y+ LI K+ AM L EMR+
Sbjct: 218 ILRTLCDSGKLKEAMEVLDRQMQRECY--PDVITYTILIEATCKESGVGQAMKLLDEMRD 275
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQ 232
GC+PD YN LI K L +A+ + M C+PN++T+NI+LR+ C+
Sbjct: 276 KGCKPDVVTYNVLINGIC----KEGRLDEAIRFLNHMPSYG-CQPNVITHNIILRSMCST 330
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
R +D E+ +P + T+N +++ + G+I VL +M + C P+ ++
Sbjct: 331 GRWMD-AEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLS 389
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N L+ + K + ++ + ++ P + T+N+++ K A + ++
Sbjct: 390 YNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLG 449
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ +P ITY +I A ++ DE+ G + T + ++ G
Sbjct: 450 SKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVD 509
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
EA F + MGV P++ TY + KA L M G P + ++ +
Sbjct: 510 EAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILI 569
Query: 473 ETFS 476
E +
Sbjct: 570 EGLA 573
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 165/390 (42%), Gaps = 37/390 (9%)
Query: 130 EVFRWMQKQ--RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
E F++++ R I D + LI + K G+T A + + +SG PD YN LI
Sbjct: 128 EGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLI 187
Query: 188 TAHLHTRDKAKALA------------------KALGYFQKMK--------GMER-CKPNI 220
+ + T + AL + L K+K M+R C P++
Sbjct: 188 SGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDV 247
Query: 221 VTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSR 280
+TY IL+ A + V Q L E+ + PD+ TYN +++ K G + E L+
Sbjct: 248 ITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNH 307
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
M S C+P++IT N+++ S + E+ ++ P++ TFN +I + L
Sbjct: 308 MPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGL 367
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
G+A V +KM TP+ ++Y ++ + RA E D + G + T N
Sbjct: 368 IGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNT 427
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+L A C +G A + + G +P TY + +K + KLL M+ G
Sbjct: 428 LLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKG 487
Query: 461 IVPNKRFFLEALETFSSSLAGSQSGSAKTD 490
+ P+ + S+L G S K D
Sbjct: 488 LKPDIITY--------STLVGGLSREGKVD 509
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 114/266 (42%), Gaps = 13/266 (4%)
Query: 133 RWMQKQRWYI--------ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
RWM +++ ++ LI + +KG A+ + +M GC P+ YN
Sbjct: 332 RWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYN 391
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
L LH K K + +A+ Y M C P+IVTYN LL A + VD +
Sbjct: 392 PL----LHALCKDKKMERAIEYLDIMVS-RGCYPDIVTYNTLLTALCKDGKVDVAVEILN 446
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
+L +P + TYN V+D K G + +L MK KPDIIT++ L+ +
Sbjct: 447 QLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREG 506
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
D+ F L KP T+NS+++ KAR +A M A P+ +Y
Sbjct: 507 KVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYM 566
Query: 365 CIITMYGYCDNVSRAREIFDELSKLG 390
+I Y A E+ +EL G
Sbjct: 567 ILIEGLAYEGLAKEALELLNELCSRG 592
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 132/321 (41%), Gaps = 5/321 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ ++ + G+ + AM + C PD Y LI A K + +A
Sbjct: 211 DVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATC----KESGVGQA 266
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ +M+ + CKP++VTYN+L+ + +D+ + P++ T+N ++
Sbjct: 267 MKLLDEMRD-KGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILR 325
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ G + E L+ M C P ++TFN+LI+ ++ + V + + P
Sbjct: 326 SMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTP 385
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
++N ++ K + +A M + P +TY ++T V A EI
Sbjct: 386 NSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEIL 445
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
++L G + T N +++ G +A L + G+ PD TY L ++
Sbjct: 446 NQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSRE 505
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+ +E+ G+ PN
Sbjct: 506 GKVDEAIAFFHDLEEMGVKPN 526
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 159/358 (44%), Gaps = 44/358 (12%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y ++ + K+G T LA L ++M P +Y +I K K + A
Sbjct: 220 DLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLC----KNKHMDDA 275
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
L F++M KG+ +PN+VTY+ L+ + L ++ E + PD++T++ +
Sbjct: 276 LNLFKEMETKGI---RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 332
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+DA+ K G + E E + M P I+T++ LI+ + D+ +Q+F+ ++
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 392
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P + +++++I + KA+ + +F++M+ + +TY +I + A+E
Sbjct: 393 FPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQE 452
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE-----------NSHNM------ 424
IF E+ G + T N +L+ C NG +A ++FE ++N+
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512
Query: 425 ------------------GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
GV PD Y + + + KE L K M+++G +PN
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPN 570
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 137/319 (42%), Gaps = 44/319 (13%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH-LHTR-DKAKALA 201
D +S LI K+G+ A L+ EM P Y++LI +H R D+AK +
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM- 383
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
F+ M + C P++V+Y+ L++ +A+ VD+ LF+E+ + L + TY +
Sbjct: 384 -----FEFMVS-KHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ + G + + M S+ P+I+T+N L+D K +K VF+ L SK
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
+PT+ T+N MI KA GK E +
Sbjct: 498 EPTIYTYNIMIEGMCKA---GKVE--------------------------------DGWD 522
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+F LS G V N M+ +C G EAD LF+ G P+S Y L +A
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 582
Query: 442 KANMKELVQKLLKRMEQNG 460
+ +E +L+K M G
Sbjct: 583 RDGDREASAELIKEMRSCG 601
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 154/355 (43%), Gaps = 46/355 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+SKL++ + K + + + L +M+N G + Y+ LI ALA LG
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALA-VLGKM 142
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K+ G E PNIVT + LL ++ + + AL ++ + P+ T+N ++
Sbjct: 143 MKL-GYE---PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD-------KMEQ--------- 311
+ E +++ RM + C+PD++T+ ++++ KR D KMEQ
Sbjct: 199 HNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLI 258
Query: 312 -------------------VFKSLMHSKEKPTLPTFNSMI---INYGKARLQGKAEYVFQ 349
+FK + +P + T++S+I NYG+ A +
Sbjct: 259 YTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR---WSDASRLLS 315
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
M K P T+ +I + + A +++DE+ K D + T ++++ +CM+
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA +FE + PD +Y L K + KA + +L + M Q G+V N
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGN 430
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 109/234 (46%), Gaps = 16/234 (6%)
Query: 109 SEHCF-------LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQT 161
S+HCF L + K+ + + +E+FR M QR + +T Y+ LI + + G
Sbjct: 389 SKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMS-QRGLVGNTVTYTTLIQGLFQAGDC 447
Query: 162 RLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV 221
+A +F EM + G P+ YN L+ KA+ Y Q+ K ME P I
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV-VFEYLQRSK-ME---PTIY 502
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
TYNI++ +A V+ LF L + PD+ YN ++ + + G +E +++ M
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Query: 282 KSNQCKPDIITFNLLIDSY---GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
K + P+ +N LI + G R+A ++ + +S + + T+ +M+
Sbjct: 563 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 118/278 (42%), Gaps = 5/278 (1%)
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L A+ F +M R P+I+ ++ LL A A+ D V +L +++ + + YTY+
Sbjct: 62 LDDAVALFGEMVK-SRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
+++ + + + +VL +M +P+I+T + L++ Y + + + + +
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVS 377
+P TFN++I +A + +M A P +TY ++ G C +
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVN--GLCKRGDTD 238
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
A + +++ + + V +++ C N +A LF+ G+ P+ TY L
Sbjct: 239 LAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+LL M + I P+ F ++ F
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 336
>gi|255661196|gb|ACU25767.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 426
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 146/303 (48%), Gaps = 11/303 (3%)
Query: 130 EVFRWMQKQRW--YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
+ W+QK D +YS LI + K A+ +FS ++ SG PD VYN++I
Sbjct: 27 DALSWLQKMEHDRVRGDLXLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDLVVYNSMI 86
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
KAK +A +M+ P+ V+Y LL + + + ++F E+
Sbjct: 87 NVF----GKAKLFREARSLICEMR-TXGVMPDTVSYTTLLTMYVENKKFIEALSVFAEMR 141
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
E D+ T N ++D YG+ GM KE + + M+ +P+++++N L+ Y + F
Sbjct: 142 EIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGVEPNVVSYNTLLRVYSDAELFG 201
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
+ +F+ + + + T+NSM++ YGK KA + Q+M + P+ ITY II
Sbjct: 202 EAXHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTII 261
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
+++G + RA +F++L G ++ M+ AY GL + A L H + T
Sbjct: 262 SIWGKVGKLDRAAMLFEKLRSSGIEIDQVLYQTMIVAYERAGLVSHAKRLL---HELK-T 317
Query: 428 PDS 430
PD+
Sbjct: 318 PDN 320
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 153/327 (46%), Gaps = 5/327 (1%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
++R D YS LI GK+G A+ +M + R D +Y+ LI D
Sbjct: 1 RERALSPDKYTYSTLITHFGKEGLFDDALSWLQKMEHDRVRGDLXLYSNLIELSRKLCDY 60
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+KA++ F ++K P++V YN ++ +A+ + +L E+ + PD
Sbjct: 61 SKAIS----IFSRLK-RSGITPDLVVYNSMINVFGKAKLFREARSLICEMRTXGVMPDTV 115
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+Y ++ Y +N E SV + M+ +C D+ T N++ID YG+ + +++F S+
Sbjct: 116 SYTTLLTMYVENKKFIEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSM 175
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P + ++N+++ Y A L G+A ++F+ M + +TY ++ +YG
Sbjct: 176 RKLGVEPNVVSYNTLLRVYSDAELFGEAXHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEH 235
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A + E+ G + T + ++ + G A +LFE + G+ D Y+ +
Sbjct: 236 EKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFEKLRSSGIEIDQVLYQTM 295
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVP 463
AY +A + ++LL ++ +P
Sbjct: 296 IVAYERAGLVSHAKRLLHELKTPDNIP 322
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 110/217 (50%)
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
E L+PD YTY+ ++ +GK G+ + S L +M+ ++ + D+ ++ LI+ K +
Sbjct: 2 ERALSPDKYTYSTLITHFGKEGLFDDALSWLQKMEHDRVRGDLXLYSNLIELSRKLCDYS 61
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
K +F L S P L +NSMI +GKA+L +A + +M P ++Y ++
Sbjct: 62 KAISIFSRLKRSGITPDLVVYNSMINVFGKAKLFREARSLICEMRTXGVMPDTVSYTTLL 121
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
TMY A +F E+ ++ + ++T N M++ Y G+ EAD LF + +GV
Sbjct: 122 TMYVENKKFIEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGVE 181
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
P+ +Y L + Y+ A + L + M++ I N
Sbjct: 182 PNVVSYNTLLRVYSDAELFGEAXHLFRLMQRKDIEQN 218
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 147/353 (41%), Gaps = 42/353 (11%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +Y+ +I V GK R A L EMR G PD Y L+T ++ K +A
Sbjct: 78 DLVVYNSMINVFGKAKLFREARSLICEMRTXGVMPDTVSYTTLLTMYVEN----KKFIEA 133
Query: 204 LGYFQKMK---------------------GMER-------------CKPNIVTYNILLRA 229
L F +M+ GM + +PN+V+YN LLR
Sbjct: 134 LSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGVEPNVVSYNTLLRV 193
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
+ A + LF+ + + ++ TYN +M YGK ++ +++ M+S +P+
Sbjct: 194 YSDAELFGEAXHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPN 253
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
IT++ +I +GK D+ +F+ L S + + +MI+ Y +A L A+ +
Sbjct: 254 AITYSTIISIWGKVGKLDRAAMLFEKLRSSGIEIDQVLYQTMIVAYERAGLVSHAKRLLH 313
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
++ TP I + I + + A +F + G+ ++ M++ +
Sbjct: 314 ELK----TPDNIPRDTAIQILAGSGRMEEATWVFRQAIDAGEVKDITVFEQMIDLFSKYR 369
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+ +F+ +G PDS+ L+ AY K + E + M+ G V
Sbjct: 370 KYSNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHDFEKANDVYLEMQDEGCV 422
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 127/298 (42%), Gaps = 37/298 (12%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
K+++ L VF M++ + + D + +I V G+ G + A LF MR G P+ Y
Sbjct: 129 KFIEALSVFAEMREIKC-LLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGVEPNVVSY 187
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
N L+ + A+ +A F+ M+ + + N+VTYN ++ + ++ N L
Sbjct: 188 NTLLRVY----SDAELFGEAXHLFRLMQRKD-IEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY--- 300
+E+ + P+ TY+ ++ +GK G + + +++S+ + D + + +I +Y
Sbjct: 243 QEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFEKLRSSGIEIDQVLYQTMIVAYERA 302
Query: 301 -----GKRQAFD--------------------KMEQ---VFKSLMHSKEKPTLPTFNSMI 332
KR + +ME+ VF+ + + E + F MI
Sbjct: 303 GLVSHAKRLLHELKTPDNIPRDTAIQILAGSGRMEEATWVFRQAIDAGEVKDITVFEQMI 362
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
+ K R VF KM + Y P ++ YG + +A +++ E+ G
Sbjct: 363 DLFSKYRKYSNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHDFEKANDVYLEMQDEG 420
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 153/326 (46%), Gaps = 6/326 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y LI + K G+TR A+ L +M G RP+ +YN ++ K + +A
Sbjct: 160 DEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLC----KEGLVTEA 215
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
G +M G C ++ TYN L+ C + V L + + + + PD+YT+N ++
Sbjct: 216 CGLCSEMVGKGICI-DVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILV 274
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
DA K GM+ E +V M +PD+++ N L++ + R + ++VF ++ +
Sbjct: 275 DALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKL 334
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P + +++++I Y K ++ +A + +M P +TY C++ V ++
Sbjct: 335 PNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDL 394
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+ + G+ + T N +L+ Y +A LF++ + G++P+ TY +L K
Sbjct: 395 VEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCK 454
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFF 468
+ +++ + + G PN R +
Sbjct: 455 GGRMKAAKEIFQLLSVKGCRPNIRTY 480
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 167/392 (42%), Gaps = 17/392 (4%)
Query: 86 LMRSFSDKEPLVRTLNKYVKVVR-----SEHCF-LLFEELGKSDKWLQCLEVFRWMQKQR 139
LM+ K LN Y V E C+ L L K K +E+ R M+K
Sbjct: 132 LMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGG 191
Query: 140 WYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKA 199
+ +Y+ ++ + K+G A L SEM G D YN+LI H A
Sbjct: 192 VR-PNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLI----HGFCGAGQ 246
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
A+ +M E +P++ T+NIL+ A + V + +F + + L PD+ + N
Sbjct: 247 FQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCN 306
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
+M+ + G + E + V RM P++I+++ LI+ Y K + D+ ++ +
Sbjct: 307 ALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQR 366
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT---PSFITYECIITMYGYCDNV 376
P T+N ++ K+ G+ Y + + AM+ + P ITY ++ Y + +
Sbjct: 367 NLVPDTVTYNCLLDGLSKS---GRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECL 423
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A +F + G + T N +++ C G A +F+ G P+ TY ++
Sbjct: 424 DKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIM 483
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+ + + + LL M +G PN F
Sbjct: 484 INGLRREGLLDEAEALLLEMVDDGFPPNAVTF 515
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 109/250 (43%), Gaps = 2/250 (0%)
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
C + R + +N L+ + D Y +++ K G ++ +L +M+ +P+
Sbjct: 137 CLKGRTFEALN-LYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPN 195
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY-GKARLQGKAEYVF 348
+I +N+++D K + + ++ + T+NS+I + G + QG +
Sbjct: 196 LIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLN 255
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
+ + P T+ ++ V+ AR +F + K G + V + NA++ +C+
Sbjct: 256 EMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLR 315
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G +EA +F+ G P+ +Y L Y K M + +LL M Q +VP+ +
Sbjct: 316 GCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTY 375
Query: 469 LEALETFSSS 478
L+ S S
Sbjct: 376 NCLLDGLSKS 385
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 10/205 (4%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
EVF M +R + + YS LI K A+ L +EM PD YN L+
Sbjct: 323 EVFDRMV-ERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLL-- 379
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERC--KPNIVTYNILLRACAQARNVDQVNALFKELH 247
D + L + ++ M P+++TYN+LL + +D+ ALF+ +
Sbjct: 380 -----DGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIV 434
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
++ ++P+I TYN ++D K G +K + + + C+P+I T+N++I+ + D
Sbjct: 435 DTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLD 494
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMI 332
+ E + ++ P TF+ ++
Sbjct: 495 EAEALLLEMVDDGFPPNAVTFDPLV 519
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 111/260 (42%), Gaps = 42/260 (16%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++ L+ + K G A +F M G PD NAL+ +++A
Sbjct: 266 DVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWC----LRGCMSEA 321
Query: 204 LGYFQKMKGMERCK-PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
F +M +ER K PN+++Y+ L+ + + VD+ L E+H+ L PD TYN ++
Sbjct: 322 KEVFDRM--VERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLL 379
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITF----------------------------- 293
D K+G + ++ M+++ PD+IT+
Sbjct: 380 DGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGIS 439
Query: 294 ------NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
N+LID K +++F+ L +P + T+N MI + L +AE +
Sbjct: 440 PNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEAL 499
Query: 348 FQKMTAMKYTPSFITYECII 367
+M + P+ +T++ ++
Sbjct: 500 LLEMVDDGFPPNAVTFDPLV 519
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 70/167 (41%), Gaps = 7/167 (4%)
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR----LQGKAEYVFQKMTAMKYT 357
K FD F ++H P++ + N ++ + K + + ++ K T
Sbjct: 32 KTPTFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTP---K 88
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
PS +T I + + A + ++ K G + TL +++ C+ G EA L
Sbjct: 89 PSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNL 148
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
++++ + G + D Y L K +LL++ME+ G+ PN
Sbjct: 149 YDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPN 195
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 155/327 (47%), Gaps = 15/327 (4%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT---AHLHTRDKAKA 199
AD I++ +I + K A+ LF EM G RP+ Y++LI+ ++ D ++
Sbjct: 220 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 279
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L+ + ++ PN+VT+N L+ A + + L+ ++ + + PDI+TYN
Sbjct: 280 LSDMIE--------KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN 331
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
+++ + + + + + + M S C PD++T+N LI + K + + ++F+ + H
Sbjct: 332 SLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR 391
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VS 377
T+ ++I A+ VF++M + P +TY I + G C+N +
Sbjct: 392 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS--ILLDGLCNNGKLE 449
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
+A E+FD + K + + M+E C G + LF + GV P+ TY +
Sbjct: 450 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 509
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPN 464
+ + LLK+M+++G +PN
Sbjct: 510 SGLCSKRLLQEAYALLKKMKEDGPLPN 536
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 146/323 (45%), Gaps = 9/323 (2%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
Y DT ++ LI + + A+ L M GC+P+ Y ++ D AL
Sbjct: 148 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 207
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
KM+ + + ++V +N ++ + + R+VD LFKE+ + P++ TY+
Sbjct: 208 ----NLLNKMEA-AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 262
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ G + +LS M + P+++TFN LID++ K F + E+++ ++
Sbjct: 263 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 322
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSR 378
P + T+NS++ + KA+ +F+ M + P +TY +I G+C + V
Sbjct: 323 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIK--GFCKSKRVED 380
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
E+F E+S G T +++ +G A +F+ + GV PD TY +L
Sbjct: 381 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 440
Query: 439 AYTKANMKELVQKLLKRMEQNGI 461
E ++ M+++ I
Sbjct: 441 GLCNNGKLEKALEVFDYMQKSEI 463
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 150/309 (48%), Gaps = 21/309 (6%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVT 222
A+ L +M G RPD + LI L +KA ++A+ +M ++R C+PN+VT
Sbjct: 136 AVALVDQMVEMGYRPDTITFTTLIHG-LFLHNKA---SEAVALVDRM--VQRGCQPNLVT 189
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y +++ + + D L ++ + + D+ +N ++D+ K + + ++ M+
Sbjct: 190 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 249
Query: 283 SNQCKPDIITFNLLID---SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
+ +P+++T++ LI SYG+ + Q+ ++ K P L TFN++I + K
Sbjct: 250 TKGIRPNVVTYSSLISCLCSYGR---WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 306
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDM--KV 395
+AE ++ M P TY ++ G+C D + +A+++F+ + + KD V
Sbjct: 307 KFVEAEKLYDDMIKRSIDPDIFTYNSLVN--GFCMHDRLDKAKQMFEFM--VSKDCFPDV 362
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
T N +++ +C + + LF + G+ D+ TY L + + QK+ K+
Sbjct: 363 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 422
Query: 456 MEQNGIVPN 464
M +G+ P+
Sbjct: 423 MVSDGVPPD 431
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH-LHTR-DKAKALAKALG 205
++ LI K+G+ A L+ +M PD YN+L+ +H R DKAK +
Sbjct: 295 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM----- 349
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
F+ M + C P++VTYN L++ +++ V+ LF+E+ L D TY ++
Sbjct: 350 -FEFMVSKD-CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 407
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+G + V +M S+ PDI+T+++L+D +K +VF + S+ K +
Sbjct: 408 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 467
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
+ +MI KA GK V ++F
Sbjct: 468 YIYTTMIEGMCKA---GK--------------------------------VDDGWDLFCS 492
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
LS G V T N M+ C L EA L + G P+S TY L +A+ +
Sbjct: 493 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 552
Query: 446 KELVQKLLKRM 456
K +L++ M
Sbjct: 553 KAASAELIREM 563
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 145/355 (40%), Gaps = 46/355 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++KL++ + K + + + L +M+ YN LI + ALA LG
Sbjct: 50 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALA-LLGKM 108
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K+ G E P+IVT + LL + + AL ++ E PD T+ ++
Sbjct: 109 MKL-GYE---PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 164
Query: 268 NGMIKEMESVLSRMKSNQCKPDIIT----------------------------------- 292
+ E +++ RM C+P+++T
Sbjct: 165 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 224
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI---INYGKARLQGKAEYVFQ 349
FN +IDS K + D +FK + +P + T++S+I +YG+ A +
Sbjct: 225 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR---WSDASQLLS 281
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
M K P+ +T+ +I + A +++D++ K D + T N+++ +CM+
Sbjct: 282 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 341
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+A +FE + PD TY L K + K+ E +L + M G+V +
Sbjct: 342 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 396
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 116/278 (41%), Gaps = 5/278 (1%)
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L A+G F M R P+IV +N LL A A+ + D V +L +++ + +YTYN
Sbjct: 28 LDDAIGLFGGMVK-SRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 86
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
+++ + + I ++L +M +P I+T + L++ Y + + ++
Sbjct: 87 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 146
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVS 377
+P TF ++I +A + +M P+ +TY ++ G C +
Sbjct: 147 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN--GLCKRGDTD 204
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
A + +++ + V N ++++ C +A LF+ G+ P+ TY L
Sbjct: 205 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 264
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+LL M + I PN F ++ F
Sbjct: 265 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 302
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 6/171 (3%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E+FR M R + DT Y+ LI + G A +F +M + G PD Y+ L+
Sbjct: 383 ELFREMS-HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 441
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ KAL + Y QK K +I Y ++ +A VD LF L
Sbjct: 442 LCNNGKLEKAL-EVFDYMQK----SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 496
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
+ P++ TYN ++ +++E ++L +MK + P+ T+N LI ++
Sbjct: 497 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAH 547
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 94/242 (38%)
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y +LR +D LF + +S P I +N ++ A K + S+ +M+
Sbjct: 15 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 74
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
+ + T+N+LI+ + +R + +M +P++ T +S++ Y +
Sbjct: 75 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 134
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
A + +M M Y P IT+ +I + S A + D + + G + T ++
Sbjct: 135 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 194
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
C G A L + D + + + K + L K ME GI
Sbjct: 195 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 254
Query: 463 PN 464
PN
Sbjct: 255 PN 256
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L + K + LEVF +MQK + D IY+ +I M K G+ LF +
Sbjct: 437 ILLDGLCNNGKLEKALEVFDYMQKSEIKL-DIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 495
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA 229
G +P+ YN +I+ R L +A +KMK + PN TYN L+RA
Sbjct: 496 KGVKPNVVTYNTMISGLCSKR----LLQEAYALLKKMKE-DGPLPNSGTYNTLIRA 546
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 162/346 (46%), Gaps = 13/346 (3%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR-- 194
++R +T Y+ LIA + + G A +M + G PD Y ALI +R
Sbjct: 144 RERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRS 203
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
++AKAL +M E KPN+V Y L+ + N D+ + KE+ + + P+
Sbjct: 204 NEAKAL------LDEMSCAE-LKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPN 256
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
TY+ ++ K G + +L +M + +PD IT+NL+I+ + + ++
Sbjct: 257 KITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLS 316
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC- 373
+ ++ P + T++ MI ++ KA + ++MT P+ Y +I+ GYC
Sbjct: 317 EMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLIS--GYCR 374
Query: 374 -DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
NVS A EIFD+++K+ + N+++ G E+ F G+ P+ T
Sbjct: 375 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT 434
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
Y L Y K E ++L++RM G+ PN +++ LE++ S
Sbjct: 435 YSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKS 480
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 140/304 (46%), Gaps = 12/304 (3%)
Query: 165 MWLFSE-MRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALGYFQKMKGMER-CKPNI 220
+W E M +G PD Y+ LI A+ R D AK + +M+ ER C N
Sbjct: 101 LWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKV------LVEMR--ERGCGLNT 152
Query: 221 VTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSR 280
VTYN+L+ ++ V++ K++ + L PD +TY +++ K+ E +++L
Sbjct: 153 VTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDE 212
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
M + KP+++ + LID + + D+ ++ K ++ + +P T+++++ K
Sbjct: 213 MSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQ 272
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
+A + ++M + P ITY II + N A + E+ G V T +
Sbjct: 273 MDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSI 332
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
M+ C +G P +A L E G+ P++ Y L Y + L ++ +M +
Sbjct: 333 MIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVN 392
Query: 461 IVPN 464
++P+
Sbjct: 393 VLPD 396
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 151/336 (44%), Gaps = 16/336 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS +I + + G+ A L EM G +P+ VY LI+ + R+ +LA + F
Sbjct: 330 YSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGY--CREGNVSLACEI--F 385
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
KM + P++ YN L+ ++ V++ F ++ E L P+ +TY+G++ Y K
Sbjct: 386 DKMTKV-NVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLK 444
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
NG ++ E ++ RM KP+ + + L++SY K +K+ FKS++
Sbjct: 445 NGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRI 504
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECIITMYGYCDNVSRARE--I 382
+ +I N + G E F+ ++ ++ P Y +I+ G C R + I
Sbjct: 505 YGILIHNLSSS---GNMEAAFRVLSEIEKNGSVPDVHVYSSLIS--GLCKTADREKAFGI 559
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
DE+SK G D + NA+++ C +G + A +F + G+ P+ TY L K
Sbjct: 560 LDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCK 619
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
L M GI P+ F L T SS
Sbjct: 620 VGDISNAFYLYNEMLATGITPDA-FVYSVLTTGCSS 654
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 153/371 (41%), Gaps = 39/371 (10%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L E KSD + F+ M Q + D IY LI + G A + SE+ +
Sbjct: 473 LLESYFKSDDIEKVSSTFKSMLDQ-GVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKN 531
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQ 232
G PD VY++LI+ T D+ KA G +M KG++ PNIV YN L+ +
Sbjct: 532 GSVPDVHVYSSLISGLCKTADR----EKAFGILDEMSKKGVD---PNIVCYNALIDGLCK 584
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+ ++ +F + L P+ TY ++D K G I + + M + PD
Sbjct: 585 SGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFV 644
Query: 293 FNLLIDSYGKRQAFDKMEQVF-KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
+++L + G A D + +F M + ++ +FN+++ + K + + +
Sbjct: 645 YSVL--TTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVI 702
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL------------SKLGKDM------ 393
P+ +T E II+ +S IF EL S L DM
Sbjct: 703 MGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKI 762
Query: 394 KVSTLNAMLEAYCMNGLPTEA----DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
+ ++ M+ +C G +A D++ S MG SS ++ K + E +
Sbjct: 763 PLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGC---SSYLAIVDNLCRKGKLSEAL 819
Query: 450 QKLLKRMEQNG 460
LLK M++ G
Sbjct: 820 N-LLKEMDKRG 829
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 72/184 (39%)
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
++L+D+Y K +V + P++ N+++ + +A V + M
Sbjct: 49 VLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFM 108
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+P TY +I Y A+++ E+ + G + T N ++ C +G
Sbjct: 109 VGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAV 168
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
EA ++ + G+ PD TY L K+ + LL M + PN +
Sbjct: 169 EEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANL 228
Query: 472 LETF 475
++ F
Sbjct: 229 IDGF 232
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 117/310 (37%), Gaps = 80/310 (25%)
Query: 261 VMDAYGKNGMIKEMESVLSRMK------SNQC---------------------------- 286
++D Y K+G +++ V+ M+ S +C
Sbjct: 53 LVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 112
Query: 287 -KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII------------ 333
PD+ T++ LI++Y K + FD ++V + T+N +I
Sbjct: 113 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 172
Query: 334 -------NYG----------------KARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+YG K+R +A+ + +M+ + P+ + Y +I +
Sbjct: 173 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 232
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
N A ++ E+ G T + ++ C G A LL + PD+
Sbjct: 233 MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT 292
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG-SQSGSAK- 488
TY L+ + + + + K+ +LL ME GI PN + T+S + G QSG +
Sbjct: 293 ITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPN-------VYTYSIMIHGLCQSGEPEK 345
Query: 489 -TDLTRSLST 497
+DL ++T
Sbjct: 346 ASDLLEEMTT 355
>gi|242083798|ref|XP_002442324.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
gi|241943017|gb|EES16162.1| hypothetical protein SORBIDRAFT_08g018230 [Sorghum bicolor]
Length = 647
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 151/334 (45%), Gaps = 41/334 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+S LI+ + G AM + M+ +G RP YNA+I A L LGYF
Sbjct: 26 HSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDA---CGKGGVDLRFTLGYF 82
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M C P+ T+N LL AC++A +++ +F E+ DIYTYN +DA K
Sbjct: 83 RQMLQDGLC-PDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAICK 141
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD---KMEQVFKSL-------- 316
G ++ V+ M++N KP+++T++ L+D + K + +D K+ + KSL
Sbjct: 142 CGNMELATQVVLDMEANNIKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLGIQLDRVC 201
Query: 317 ------MHSK-------------------EKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
++ K EK T+ T+NS+I YGK ++ Q M
Sbjct: 202 YNTLLAIYVKTGKYDEIATVCEDMENLGIEKDTV-TYNSLINGYGKQGRLDMVAFLVQDM 260
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
A PS +TY +I +Y A ++ + + G V ++ ++ NGL
Sbjct: 261 RAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLV 320
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
A L + MG+ P+ TY + A+ K+ +
Sbjct: 321 ECALSLLDEMIKMGIKPNVVTYNTIIDAFGKSKI 354
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 149/355 (41%), Gaps = 28/355 (7%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L FR M Q D ++ L+A + G A +F EM + G D YN +
Sbjct: 79 LGYFRQML-QDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVD 137
Query: 189 AHLHTRDKAKALAKALGYFQKMKGME--RCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
A + A Q + ME KPN+VTY+ L+ ++ D+ L +++
Sbjct: 138 AICKCGNMELAT-------QVVLDMEANNIKPNVVTYSTLMDGFSKLEKYDEALKLREKM 190
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
+ D YN ++ Y K G E+ +V M++ + D +T+N LI+ YGK+
Sbjct: 191 KSLGIQLDRVCYNTLLAIYVKTGKYDEIATVCEDMENLGIEKDTVTYNSLINGYGKQGRL 250
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
D + + + + P++ T++++I Y KA + G A V+ + +
Sbjct: 251 DMVAFLVQDMRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSF 310
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I V A + DE+ K+G V T N +++A+ + + TE E+ NMG+
Sbjct: 311 IDTLAKNGLVECALSLLDEMIKMGIKPNVVTYNTIIDAFGKSKILTE-----EDPGNMGI 365
Query: 427 TP--------DSSTYKLLYKAYTKANMKE-----LVQKLLKRMEQNGIVPNKRFF 468
++ ++ T M+ + +L ++M Q G+ PN F
Sbjct: 366 VGVYGGQIVRATNPVTRGGRSATDVRMRRSQELFFILELFQKMVQQGVRPNVVTF 420
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 133/296 (44%), Gaps = 8/296 (2%)
Query: 183 YNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL 242
++ALI+A+ ++ +A+G + MKG +P V+YN ++ AC + VD L
Sbjct: 26 HSALISAYA----RSGLATEAMGVLESMKG-AGLRPTTVSYNAVIDACGKG-GVDLRFTL 79
Query: 243 --FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
F+++ + L PD T+N ++ A + G +++ +V M DI T+N +D+
Sbjct: 80 GYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFVDAI 139
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
K + QV + + KP + T+++++ + K +A + +KM ++
Sbjct: 140 CKCGNMELATQVVLDMEANNIKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLGIQLDR 199
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
+ Y ++ +Y + +++ LG + T N+++ Y G L ++
Sbjct: 200 VCYNTLLAIYVKTGKYDEIATVCEDMENLGIEKDTVTYNSLINGYGKQGRLDMVAFLVQD 259
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
GV P TY L Y+KA M + +++G+ + F ++T +
Sbjct: 260 MRAQGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKADVVLFSSFIDTLA 315
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 115/266 (43%), Gaps = 1/266 (0%)
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM-IK 272
+R + ++ L+ A A++ + + + + + L P +YN V+DA GK G+ ++
Sbjct: 17 DRYGNTVFAHSALISAYARSGLATEAMGVLESMKGAGLRPTTVSYNAVIDACGKGGVDLR 76
Query: 273 EMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
+M + PD TFN L+ + + + VF ++H + T+N+ +
Sbjct: 77 FTLGYFRQMLQDGLCPDRKTFNSLLAACSRAGHLEDARTVFDEMIHLGSGRDIYTYNTFV 136
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKD 392
K A V M A P+ +TY ++ + + A ++ +++ LG
Sbjct: 137 DAICKCGNMELATQVVLDMEANNIKPNVVTYSTLMDGFSKLEKYDEALKLREKMKSLGIQ 196
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
+ N +L Y G E + E+ N+G+ D+ TY L Y K ++V L
Sbjct: 197 LDRVCYNTLLAIYVKTGKYDEIATVCEDMENLGIEKDTVTYNSLINGYGKQGRLDMVAFL 256
Query: 453 LKRMEQNGIVPNKRFFLEALETFSSS 478
++ M G+ P+ + ++ +S +
Sbjct: 257 VQDMRAQGVAPSVLTYSTLIDIYSKA 282
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 124/280 (44%), Gaps = 19/280 (6%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
F +L K D+ L+ E + + Q D Y+ L+A+ K G+ + +M N G
Sbjct: 174 FSKLEKYDEALKLREKMKSLGIQ----LDRVCYNTLLAIYVKTGKYDEIATVCEDMENLG 229
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
D YN+LI + K L Q M+ + P+++TY+ L+ ++A
Sbjct: 230 IEKDTVTYNSLINGY----GKQGRLDMVAFLVQDMRA-QGVAPSVLTYSTLIDIYSKAGM 284
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
++ + ES L D+ ++ +D KNG+++ S+L M KP+++T+N
Sbjct: 285 HGDAFNVYLDFKESGLKADVVLFSSFIDTLAKNGLVECALSLLDEMIKMGIKPNVVTYNT 344
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA----RLQGKAEY----- 346
+ID++GK + + + ++ + N + G++ R++ E
Sbjct: 345 IIDAFGKSKILTEEDPGNMGIVGVYGGQIVRATNP-VTRGGRSATDVRMRRSQELFFILE 403
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
+FQKM P+ +T+ I+ C+N A + ++L
Sbjct: 404 LFQKMVQQGVRPNVVTFSAILNACSRCNNFEDAALLLEQL 443
>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 146/326 (44%), Gaps = 19/326 (5%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH--LHTRDKAKALA 201
D IYS +I + K G A +LFSEM G P+ YN +I A+ L
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Query: 202 KALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+ + +ER P+++T+N L+ A + + + L E+ + PD TYN
Sbjct: 355 RDM--------IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNS 406
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ + K+ + + + M S PD++TFN +ID Y + + D+ Q+ + +
Sbjct: 407 MIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSR 378
T+N++I + + A+ +FQ+M + P IT C I +YG+C+N +
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT--CNILLYGFCENEKLEE 520
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A E+F+ + D+ N ++ C EA LF + GV PD TY ++
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPN 464
+ + L +M+ NG P+
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPD 606
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 168/352 (47%), Gaps = 26/352 (7%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y ++ M K G T+ A+ L S+M + +PD +Y+A+I +D + A+
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL--CKDGHHSDAQY 317
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNG 260
L F +M KG+ PN+ TYN ++ C+ R D L +++ E + PD+ T+N
Sbjct: 318 L--FSEMLEKGI---APNVFTYNCMIDGFCSFGRWSD-AQRLLRDMIEREINPDVLTFNA 371
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ A K G + E E + M PD +T+N +I + K FD + +F LM S
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMAS- 429
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSR 378
P + TFN++I Y +A+ + + ++++ + TY +I +G+C DN++
Sbjct: 430 --PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI--HGFCEVDNLNA 485
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A+++F E+ G T N +L +C N EA LFE + D+ Y ++
Sbjct: 486 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTD 490
K + + L + +G+ P+ ++T++ ++G SA +D
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPD-------VQTYNVMISGFCGKSAISD 590
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 142/315 (45%), Gaps = 11/315 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ LI + +G+ A L ++M G D Y ++ D AL
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL----NLL 284
Query: 208 QKMKGMERCKPNIVTYN-ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
KM+ KP++V Y+ I+ R C + D LF E+ E +AP+++TYN ++D +
Sbjct: 285 SKMEET-HIKPDVVIYSAIIDRLCKDGHHSD-AQYLFSEMLEKGIAPNVFTYNCMIDGFC 342
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
G + + +L M + PD++TFN LI + K + E++ ++H P
Sbjct: 343 SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 402
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T+NSMI + K A+++F M +P +T+ II +Y V ++ E+
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREI 458
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
S+ G +T N ++ +C A LF+ + GV PD+ T +L + +
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Query: 447 ELVQKLLKRMEQNGI 461
E +L + ++ + I
Sbjct: 519 EEALELFEVIQMSKI 533
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 135/340 (39%), Gaps = 60/340 (17%)
Query: 133 RWMQKQRW--------YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
RW QR D ++ LI+ K+G+ A L EM + PD YN
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 185 ALITAHL-HTR-DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL 242
++I H R D AK + + P++VT+N ++ +A+ VD+ L
Sbjct: 406 SMIYGFCKHNRFDDAKHMFDLMA-----------SPDVVTFNTIIDVYCRAKRVDEGMQL 454
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
+E+ L + TYN ++ + + + + + M S+ PD IT N+L+ + +
Sbjct: 455 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 514
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ ++ ++F+ + SK +N
Sbjct: 515 NEKLEEALELFEVIQMSKIDLDTVAYN--------------------------------- 541
Query: 363 YECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
I ++G C V A ++F L G + V T N M+ +C ++A++LF
Sbjct: 542 ----IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 597
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+ G PD+STY L + KA + +L+ M NG
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 150/351 (42%), Gaps = 25/351 (7%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
++ F +M + R + +K+I V + + +A+ L+ +M + +N LI
Sbjct: 91 IDFFDYMVRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIK 149
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVD---------- 237
L+ +L F K+ + +P++VT+N LL C + R +
Sbjct: 150 CFC----DCHKLSFSLSTFGKLTKLGF-QPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 238 ----QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ ALF ++ E L P + T+N +++ G + E +++++M D++T+
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+++ K + + + KP + ++++I K A+Y+F +M
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 354 MKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P+ TY C+I G+C S A+ + ++ + + V T NA++ A G
Sbjct: 325 KGIAPNVFTYNCMID--GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
EA+ L + + + PD+ TY + + K N + + + M +V
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVV 433
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 104/265 (39%), Gaps = 27/265 (10%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A+ ++KM+ + R NI ++NIL++ + + F +L + PD+ T+N ++
Sbjct: 125 AISLYRKME-IRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLL 183
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
C D I+ L + Y F + +F ++
Sbjct: 184 HGL--------------------CLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT 223
Query: 323 PTLPTFNSMIINYGKARLQGK---AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
P + TFN++I L+G+ A + KM +TY I+ + A
Sbjct: 224 PVVITFNTLI---NGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 280
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+ ++ + V +A+++ C +G ++A LF G+ P+ TY +
Sbjct: 281 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 340
Query: 440 YTKANMKELVQKLLKRMEQNGIVPN 464
+ Q+LL+ M + I P+
Sbjct: 341 FCSFGRWSDAQRLLRDMIEREINPD 365
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 145/328 (44%), Gaps = 6/328 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y I K G+ +A F+EM + G P+ +Y ALI H K + +A F
Sbjct: 524 YGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHC----KEGNVTEAFSVF 579
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ + R ++ TY++L+ ++ + + +F EL E L P+ +TYN ++ K
Sbjct: 580 RFILS-RRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCK 638
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + + +L M PDI+T+N+LID K ++ + +F + P T
Sbjct: 639 QGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVT 698
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ +M+ Y K++ A + ++M P Y I+ + +A ++F E+
Sbjct: 699 YAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEML 758
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ G VS N ++E YC +G EA+ L E P+ TY L KA M
Sbjct: 759 EKGFASTVS-FNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMG 817
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETF 475
++L M++ ++P + + L +
Sbjct: 818 EAKRLWLEMQERNVMPTAKTYTSLLHGY 845
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 140/324 (43%), Gaps = 11/324 (3%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ L+ K+G+ + + MR G PD YN+LI KAK + +A Y
Sbjct: 453 VYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFC----KAKRMEEARTY 508
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+M R +PN TY + ++A ++ + F E+ + P++ Y +++ +
Sbjct: 509 LMEMLE-RRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHC 567
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K G + E SV + S + D+ T+++LI + KM + F +EK LP
Sbjct: 568 KEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRN---GKMHEAFGIFSELQEKGLLP 624
Query: 327 ---TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T+NS+I K KA + ++M P +TY +I + RA+ +F
Sbjct: 625 NAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLF 684
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
D++ G T AM++ YC + PT A L E GV PD+ Y ++ K
Sbjct: 685 DDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKE 744
Query: 444 NMKELVQKLLKRMEQNGIVPNKRF 467
E L + M + G F
Sbjct: 745 EKFEKALDLFQEMLEKGFASTVSF 768
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 144/352 (40%), Gaps = 30/352 (8%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL-- 200
A+ I++ L+ + K G+ A+ + EM G PD Y+ LI H ++ A+A
Sbjct: 344 ANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFEL 403
Query: 201 ----------AKALGYFQKMKGMERC------------------KPNIVTYNILLRACAQ 232
L Y + G+ RC KPN V Y L+ A A+
Sbjct: 404 LDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAK 463
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
V++ + + + E + PD++ YN ++ + K ++E + L M + +P+ T
Sbjct: 464 EGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHT 523
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+ ID Y K + ++ F ++ P + + ++I + K +A VF+ +
Sbjct: 524 YGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFIL 583
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ + TY +I + A IF EL + G T N+++ C G
Sbjct: 584 SRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVD 643
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+A L E G+ PD TY +L KA E + L +E G+ PN
Sbjct: 644 KASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPN 695
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 173/403 (42%), Gaps = 53/403 (13%)
Query: 118 ELGKSDKWL-QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGC 176
E+G+ + L + +E+ R M + + D Y LI + ++R A + EM + G
Sbjct: 249 EMGEKARLLDEAIELKRSMV-DKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGL 307
Query: 177 RPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERC--KPNIVTYNILLRACAQAR 234
+P+P YNALI + D +A F+ M C + N++ +N LL +A
Sbjct: 308 KPEPITYNALIDGFMRQGDIEQA-------FRIKDEMVACGIEANLIIWNTLLNGVCKAG 360
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+++ + +E+ E + PD TY+ +++ + + + +L MK + P ++T++
Sbjct: 361 KMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYS 420
Query: 295 LLIDSY---GKRQAFDKMEQ------------VFKSLM--HSKEK--------------- 322
++I+ G Q + + + V+ +LM H+KE
Sbjct: 421 VIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQ 480
Query: 323 ---PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
P + +NS+II + KA+ +A +M + P+ TY I Y + A
Sbjct: 481 GILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIA 540
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
F+E+ G V A++E +C G TEA +F + V D TY +L
Sbjct: 541 DRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHG 600
Query: 440 YTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGS 482
++ + +++ G++PN T++S ++GS
Sbjct: 601 LSRNGKMHEAFGIFSELQEKGLLPNAF-------TYNSLISGS 636
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 141/337 (41%), Gaps = 19/337 (5%)
Query: 158 KGQTRLAMW-LFSEMRNSGCRPDPSVYNALITAH-------------LHTRDKAKALAKA 203
KG W +F M PD Y +I+AH L +KA+ L +A
Sbjct: 201 KGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEA 260
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+ + M KG+ P++ TY+IL+ + + + E+ + L P+ TYN +
Sbjct: 261 IELKRSMVDKGL---VPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNAL 317
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+D + + G I++ + M + + ++I +N L++ K +K ++ + +M
Sbjct: 318 IDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGV 377
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
+P T++ +I + + + +A + +M K P+ +TY II C N+
Sbjct: 378 EPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNA 437
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
I E+ G ++ A+ G E+ ++ E G+ PD Y L +
Sbjct: 438 ILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFC 497
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
KA E + L M + + PN + ++ +S +
Sbjct: 498 KAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKA 534
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 115/253 (45%), Gaps = 10/253 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI + K G+ A LF ++ G P+ Y A++ + +++ A
Sbjct: 660 DIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAA---- 715
Query: 204 LGYFQKMKGM--ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
FQ ++ M P+ YN++L C + ++ LF+E+ E A + ++N +
Sbjct: 716 ---FQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTL 771
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
++ Y K+G ++E +L M Q P+ +T+ LID K + ++++ +
Sbjct: 772 IEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNV 831
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
PT T+ S++ Y + +F++M A P +TY +I Y NV A +
Sbjct: 832 MPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACK 891
Query: 382 IFDELSKLGKDMK 394
+ DE+ G MK
Sbjct: 892 LKDEILVKGMPMK 904
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 89/415 (21%), Positives = 168/415 (40%), Gaps = 35/415 (8%)
Query: 85 VLMRSFSDKEPLVRTLNKYVKVVRSEH------CFLLFEELGKSDKWLQCLEVFRWMQKQ 138
+LM S+ LV +N ++ E C L +L K +K +VF M
Sbjct: 159 MLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAH 218
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMR-----------------NSGCRPDPS 181
+ + D Y+ +I+ K G + A + EM + G PD
Sbjct: 219 K-VLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLY 277
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
Y+ LI + +A L G+ KP +TYN L+ + +++Q
Sbjct: 278 TYDILINGFCMEKRSREAKLMLLEMIDV--GL---KPEPITYNALIDGFMRQGDIEQAFR 332
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
+ E+ + ++ +N +++ K G +++ ++ M +PD T++LLI+ +
Sbjct: 333 IKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHC 392
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR---LQGKAEYVFQKMTAMKYTP 358
+ Q + ++ + K PT+ T+ S+IIN G R LQG + ++M P
Sbjct: 393 RGQNMARAFELLDEMKKRKLAPTVLTY-SVIIN-GLCRCGNLQG-TNAILREMVMNGLKP 449
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+ + Y ++T + V +R I + + + G V N+++ +C EA
Sbjct: 450 NAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYL 509
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
+ P++ TY Y+KA E+ + M G++PN + +E
Sbjct: 510 MEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIE 564
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 140/326 (42%), Gaps = 29/326 (8%)
Query: 140 WYIADTGIYSKLIAVMGKKGQTRLAMW--LFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
WY G S LI + + + LA+ + R+ P+ +++ L+ ++ K
Sbjct: 116 WY----GPASDLIKCIIRNSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSY----RKM 167
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
L +A+ F K E +P++++ N LL + V+ +F + + PD+YT
Sbjct: 168 GFLVEAVNVFLGPKNFEF-RPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYT 226
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y ++ A+ K G +K+ + VL M K + D+ ++ +S++
Sbjct: 227 YTNMISAHCKVGNVKDAKRVLLEMGE------------------KARLLDEAIELKRSMV 268
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
P L T++ +I + + +A+ + +M + P ITY +I + ++
Sbjct: 269 DKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIE 328
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
+A I DE+ G + + N +L C G +A + + GV PDS TY LL
Sbjct: 329 QAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLI 388
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVP 463
+ + + +LL M++ + P
Sbjct: 389 EGHCRGQNMARAFELLDEMKKRKLAP 414
>gi|255549794|ref|XP_002515948.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544853|gb|EEF46368.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 706
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 178/423 (42%), Gaps = 67/423 (15%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K K Q +VF M+K+ D Y+ +I + G+ G+ ++ LF EM N
Sbjct: 82 MLLDALAKDQKVDQAFKVFEDMKKKHCE-PDEYTYTIMIRMTGRIGKLDESLALFEEMLN 140
Query: 174 SGC-----------------------------------RPDPSVYNALIT-----AHLHT 193
GC RP+ Y+ ++T LH
Sbjct: 141 KGCSPNLIAYNTMIQALANSRMVDKTILLFSKMMEKNCRPNEFTYSVILTLLAAEGQLHK 200
Query: 194 RDKAKALAK-------------ALGYFQKMKGMERCKPNIVTYN----------ILLRAC 230
DK L++ L R N+ +Y+ +L C
Sbjct: 201 LDKVVELSRKYMNRSIYAYLVRTLNKLGHASEAHRLFCNMWSYHDRGDRDACLSMLESLC 260
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
+ V+ ++ L K +HE + D YN V A G+ I + + +MK + PDI
Sbjct: 261 NAGKTVEAIDLLGK-IHEKGINTDTIMYNTVFTALGRLKQISHLYDLYEKMKLDGPLPDI 319
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
T+N+LI S+G+ + ++F+ L +S KP + ++NS+I GK +A F++
Sbjct: 320 FTYNILISSFGRAGKVYEAIKIFEELENSDCKPDIISYNSLINCLGKNGDLDEAHIRFRE 379
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M P +TY +I +G D V A +FDE+ G + T N +L+ +G
Sbjct: 380 MQEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCFPNIVTYNILLDCLERSGR 439
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
EA L+ G+TPDS TY +L + + ++ K V++ K +V R+FL+
Sbjct: 440 TAEAVDLYAKLKQQGLTPDSITYSVLERLQSGSHRKLRVRR--KNPITGWVVSPLRYFLK 497
Query: 471 ALE 473
L+
Sbjct: 498 QLQ 500
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 126/302 (41%), Gaps = 41/302 (13%)
Query: 204 LGYFQKMKGMERC---------KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
+G+F + +ERC K N TY L++A ++ + D ++ E+ D
Sbjct: 17 IGFFGDGEDLERCIGLIEKWDLKMNGYTYKCLVQAYLRSCDSDNGFRVYLEMKRKGYTLD 76
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
I+ +N ++DA K+ + + V MK C+PD T+ ++I G+ D+ +F+
Sbjct: 77 IFAFNMLLDALAKDQKVDQAFKVFEDMKKKHCEPDEYTYTIMIRMTGRIGKLDESLALFE 136
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
+++ P L +N+MI +R+ K +F KM P+ TY I+T+
Sbjct: 137 EMLNKGCSPNLIAYNTMIQALANSRMVDKTILLFSKMMEKNCRPNEFTYSVILTLLAAEG 196
Query: 375 NVSRAREIFD----------------ELSKLGKDMKVSTLN----------------AML 402
+ + ++ + L+KLG + L +ML
Sbjct: 197 QLHKLDKVVELSRKYMNRSIYAYLVRTLNKLGHASEAHRLFCNMWSYHDRGDRDACLSML 256
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
E+ C G EA L H G+ D+ Y ++ A + + L ++M+ +G +
Sbjct: 257 ESLCNAGKTVEAIDLLGKIHEKGINTDTIMYNTVFTALGRLKQISHLYDLYEKMKLDGPL 316
Query: 463 PN 464
P+
Sbjct: 317 PD 318
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 147/346 (42%), Gaps = 16/346 (4%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K++ Y D ++ L+ + K + A +F +M+ C PD Y +I +
Sbjct: 69 KRKGYTLDIFAFNMLLDALAKDQKVDQAFKVFEDMKKKHCEPDEYTYTIMI----RMTGR 124
Query: 197 AKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
L ++L F++M KG C PN++ YN +++A A +R VD+ LF ++ E P+
Sbjct: 125 IGKLDESLALFEEMLNKG---CSPNLIAYNTMIQALANSRMVDKTILLFSKMMEKNCRPN 181
Query: 255 IYTYNGVMDAYGKNGMIKEMESV--LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
+TY+ ++ G + +++ V LSR N+ + L+ + K + ++
Sbjct: 182 EFTYSVILTLLAAEGQLHKLDKVVELSRKYMNRS-----IYAYLVRTLNKLGHASEAHRL 236
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGY 372
F ++ ++ SM+ + A +A + K+ I Y + T G
Sbjct: 237 FCNMWSYHDRGDRDACLSMLESLCNAGKTVEAIDLLGKIHEKGINTDTIMYNTVFTALGR 296
Query: 373 CDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
+S ++++++ G + T N ++ ++ G EA +FE N PD +
Sbjct: 297 LKQISHLYDLYEKMKLDGPLPDIFTYNILISSFGRAGKVYEAIKIFEELENSDCKPDIIS 356
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
Y L K + + M++ G+ P+ + +E F +
Sbjct: 357 YNSLINCLGKNGDLDEAHIRFREMQEKGLNPDVVTYSTLIECFGKT 402
>gi|29294052|gb|AAO73889.1| protein kinase family [Arabidopsis thaliana]
Length = 854
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 163/333 (48%), Gaps = 7/333 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + ++ + L S++ +G +PD ++NA+I A ++ L +A+ F
Sbjct: 380 YTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINAS----SESGNLDQAMKIF 435
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE-LHESILAPDIYTYNGVMDAYG 266
+KMK CKP T+N L++ + +++ + L L + +L P+ T N ++ A+
Sbjct: 436 EKMK-ESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWC 494
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ-VFKSLMHSKEKPTL 325
I+E +++ +M+S KPD++TFN L +Y + + E + ++H+K KP +
Sbjct: 495 NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNV 554
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T +++ Y + +A F +M + P+ + +I + +++ E+ D
Sbjct: 555 RTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDL 614
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ + G V T + ++ A+ G + ++ + G+ PD + +L K Y +A
Sbjct: 615 MEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGE 674
Query: 446 KELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
E +++L +M + G+ PN + + + + S+
Sbjct: 675 PEKAEQILNQMRKFGVRPNVVIYTQIISGWCSA 707
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 143/326 (43%), Gaps = 12/326 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT +++ +I + G AM +F +M+ SGC+P S +N LI + K L ++
Sbjct: 411 DTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGY----GKIGKLEES 466
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
M E +PN T NIL++A R +++ + ++ + PD+ T+N +
Sbjct: 467 SRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAK 526
Query: 264 AYGKNGMIKEMES-VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE- 321
AY + G E ++ RM N+ KP++ T +++ Y + KME+ + KE
Sbjct: 527 AYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEE---GKMEEALRFFYRMKEL 583
Query: 322 --KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
P L FNS+I + V M P +T+ ++ + ++ R
Sbjct: 584 GVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRC 643
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
EI+ ++ + G D + + + + Y G P +A+ + GV P+ Y +
Sbjct: 644 EEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISG 703
Query: 440 YTKAN-MKELVQKLLKRMEQNGIVPN 464
+ A MK+ +Q K G+ PN
Sbjct: 704 WCSAGEMKKAMQVYKKMCGIVGLSPN 729
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 120/266 (45%), Gaps = 2/266 (0%)
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
E KP+++TY L+ A + ++ + +L ++ ++ L PD +N +++A ++G + +
Sbjct: 371 EGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQ 430
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-KPTLPTFNSMI 332
+ +MK + CKP TFN LI YGK ++ ++ ++ + +P T N ++
Sbjct: 431 AMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILV 490
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE-IFDELSKLGK 391
+ R +A + KM + P +T+ + Y + A + I +
Sbjct: 491 QAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKV 550
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
V T ++ YC G EA F +GV P+ + L K + N + V +
Sbjct: 551 KPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGE 610
Query: 452 LLKRMEQNGIVPNKRFFLEALETFSS 477
++ ME+ G+ P+ F + +SS
Sbjct: 611 VVDLMEEFGVKPDVVTFSTLMNAWSS 636
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/329 (18%), Positives = 142/329 (43%), Gaps = 40/329 (12%)
Query: 170 EMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA 229
+M++ G +PD +N L A + R + A+ + + + + KPN+ T ++
Sbjct: 508 KMQSYGVKPDVVTFNTL--AKAYARIGSTCTAEDMIIPRMLH--NKVKPNVRTCGTIVNG 563
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
+ +++ F + E + P+++ +N ++ + + + V+ M+ KPD
Sbjct: 564 YCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPD 623
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
++TF+ L++++ + E+++ ++ P + F+ + Y +A KAE +
Sbjct: 624 VVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILN 683
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
+M P+ + Y II+ + + +A +++ ++ +
Sbjct: 684 QMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGI-------------------- 723
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFL 469
+G++P+ +TY+ L + +A ++LLK ME +VP ++ +
Sbjct: 724 --------------VGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRK-TM 768
Query: 470 EALETFSSSLAGSQSGSAKTDLTRSLSTA 498
+ + S+ S S A T L S ST+
Sbjct: 769 QLIADGWKSIGVSNSNDANT-LGSSFSTS 796
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 6/242 (2%)
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ +++F L E P + TY ++ A + + S++S+++ N KPD I FN +I
Sbjct: 360 EAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAII 419
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK-ARLQGKAEYVFQKMTAMKY 356
++ + D+ ++F+ + S KPT TFN++I YGK +L+ + + +
Sbjct: 420 NASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEML 479
Query: 357 TPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG-LPTE 413
P+ T C I + +C+ + A I ++ G V T N + +AY G T
Sbjct: 480 QPNDRT--CNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTA 537
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
D++ + V P+ T + Y + E + RM++ G+ PN F ++
Sbjct: 538 EDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIK 597
Query: 474 TF 475
F
Sbjct: 598 GF 599
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 96/217 (44%), Gaps = 6/217 (2%)
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
D+ + +M+ + G +E S+ + + KP +IT+ L+ + +++ F + +
Sbjct: 341 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 400
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
+ + KP FN++I ++ +A +F+KM P+ T+ +I YG
Sbjct: 401 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 460
Query: 374 DNVSRAREIFDELSKLGKDM---KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
+ + + D + L +M T N +++A+C EA + + GV PD
Sbjct: 461 GKLEESSRLLDMM--LRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDV 518
Query: 431 STYKLLYKAYTKANMKELVQK-LLKRMEQNGIVPNKR 466
T+ L KAY + + ++ RM N + PN R
Sbjct: 519 VTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVR 555
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 4/127 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +S L + G+ A + ++MR G RP+ +Y +I+ A + KA
Sbjct: 658 DIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWC----SAGEMKKA 713
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ ++KM G+ PN+ TY L+ +A+ + L K++ + P T + D
Sbjct: 714 MQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIAD 773
Query: 264 AYGKNGM 270
+ G+
Sbjct: 774 GWKSIGV 780
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 147/329 (44%), Gaps = 10/329 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + + G+ + +F +MR C P Y ++ A + + +A+ F
Sbjct: 42 YTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAI----NLF 97
Query: 208 QKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+M+ ER C+PNI TY +++ A + +++ + E+ E L P + TYN ++D Y
Sbjct: 98 SEMR--ERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYC 155
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K GM++ + +L M SN C P+ T+N LI + +++ + + ++ S+ P++
Sbjct: 156 KEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVV 215
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T+NS+I K A + M P TY I + A +F+ L
Sbjct: 216 TYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSL 275
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
+ G A+++ YC G +A+ L + P+SSTY L K
Sbjct: 276 KEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKV 335
Query: 447 ELVQKLLKRMEQNGI---VPNKRFFLEAL 472
+ L++ M Q G+ VP + A+
Sbjct: 336 QEALLLMESMIQKGLKCTVPTYTILIVAM 364
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 137/331 (41%), Gaps = 5/331 (1%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
++ + Y+ LI K+G A + M ++ C P+ YN LI +
Sbjct: 137 EKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFC----RK 192
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
K + +A+ KM R P++VTYN L+ + +D L ++E+ + PD +T
Sbjct: 193 KNVHRAMALLSKMLE-SRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWT 251
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y+ +D K G I+E + + +K K + + + LID Y K D + ++
Sbjct: 252 YSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRML 311
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
P T+N++I K R +A + + M + TY +I +
Sbjct: 312 TEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFD 371
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
A I D++ G V A + A+C G EA+ + GV PD+ TY L+
Sbjct: 372 YAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVI 431
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
AY + +LKRM G P+ +
Sbjct: 432 DAYGGLGLLNPAFDVLKRMFDTGCDPSHHTY 462
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 148/345 (42%), Gaps = 19/345 (5%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K++ A+ IY+ LI K G+ A L M C P+ S YNALI R
Sbjct: 276 KEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKV 335
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+AL QK G+ K + TY IL+ A + + D + + ++ S PD+Y
Sbjct: 336 QEALLLMESMIQK--GL---KCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVY 390
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
Y + A+ G IKE E ++S M PD +T+ L+ID+YG + V K +
Sbjct: 391 IYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRM 450
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS--FITYECIITMYGYCD 374
+ P+ T++ +I + K L K ++ + P+ F + M +
Sbjct: 451 FDTGCDPSHHTYSCLIKHLLKEELTKK----YKNVALCDSIPNVFFADVADVWKMMKF-- 504
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
A E+F+++ + G ++T ++ C G A LF++ + GV+P + Y
Sbjct: 505 --ETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYN 562
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSL 479
L + + +L+ M ++G +P LE+L L
Sbjct: 563 SLLNCCCELGIYGDAVRLVGAMMEHGHLP----LLESLNVLFCGL 603
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 121/265 (45%), Gaps = 4/265 (1%)
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
C+ N V+Y L+ + VD+ +FK++ E P + TY ++ A ++G E
Sbjct: 35 CRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAI 94
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
++ S M+ C+P+I T+ ++I++ K ++ ++ ++ P++PT+N++I Y
Sbjct: 95 NLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGY 154
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDM 393
K + A+ + M + P+ TY +I G+C NV RA + ++ +
Sbjct: 155 CKEGMVEAAQEILDLMHSNSCNPNERTYNELIC--GFCRKKNVHRAMALLSKMLESRLTP 212
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
V T N+++ C G A L + GV PD TY + K E L
Sbjct: 213 SVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLF 272
Query: 454 KRMEQNGIVPNKRFFLEALETFSSS 478
+++ GI N+ + ++ + +
Sbjct: 273 NSLKEKGIKANEVIYTALIDGYCKA 297
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 136/346 (39%), Gaps = 35/346 (10%)
Query: 135 MQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR 194
+ + + D YS I + KKG+ A LF+ ++ G + + +Y ALI +
Sbjct: 239 LMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYC--- 295
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
KA + A +M E C PN TYN L+ + R V + L + + + L
Sbjct: 296 -KAGKMDDANSLLDRML-TEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCT 353
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
+ TY ++ A K G +L +M S+ +PD+ + I ++ R + E +
Sbjct: 354 VPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMS 413
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM----- 369
+ P T+ +I YG L A V ++M PS TY C+I
Sbjct: 414 MMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEE 473
Query: 370 -------YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
CD++ F +++ + K MK T A LFE
Sbjct: 474 LTKKYKNVALCDSIPNV--FFADVADVWKMMKFET----------------ALELFEKML 515
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G +P+ +TY L K + QKL M + G+ P++ +
Sbjct: 516 EHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIY 561
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 80/188 (42%)
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
SV + M C+ + +++ LI + D+ +FK + PT+ T+ ++
Sbjct: 25 SVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHAL 84
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
++ + +A +F +M P+ TY +I + R I DE+ + G V
Sbjct: 85 FESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSV 144
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
T NA+++ YC G+ A + + H+ P+ TY L + + LL +
Sbjct: 145 PTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSK 204
Query: 456 MEQNGIVP 463
M ++ + P
Sbjct: 205 MLESRLTP 212
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 90/235 (38%), Gaps = 15/235 (6%)
Query: 135 MQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR 194
M +R + D Y+ +I G G A + M ++GC P Y+ LI HL
Sbjct: 414 MMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIK-HLLKE 472
Query: 195 DKAKALAKALGYFQKMKGMERCK--PNIVTYNILLRACAQARNVDQVNALFKELHESILA 252
+ K K K + C PN+ ++ + + LF+++ E +
Sbjct: 473 ELTK----------KYKNVALCDSIPNVFFADV--ADVWKMMKFETALELFEKMLEHGCS 520
Query: 253 PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
P+I TY ++ K G + + + M P +N L++ + + ++
Sbjct: 521 PNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRL 580
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
++M P L + N + + + KA+ VF + Y + ++ +I
Sbjct: 581 VGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILI 635
>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 148/320 (46%), Gaps = 5/320 (1%)
Query: 145 TGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKAL 204
T +I +G G+T A +F EMR++G +P YNAL+ ++ KA L A
Sbjct: 305 TATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYV----KAGLLKDAE 360
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
+M+ PN TY+ L+ A A + + KE+ S + P+ Y ++ ++ +
Sbjct: 361 FVVSEME-RSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSS 419
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
Y G ++ VL M+++ +PD + +N++ID++GK D F ++ +P
Sbjct: 420 YRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPD 479
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
T+N++I + +A +AE +F++M Y+P T+ +I +G + + +
Sbjct: 480 TVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLA 539
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ G T +++ Y +G +A ++ G+ P S+ Y L AY +
Sbjct: 540 HMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRG 599
Query: 445 MKELVQKLLKRMEQNGIVPN 464
+ E + M +G+ P+
Sbjct: 600 LSEQAVSAFRAMRVDGLKPS 619
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 161/347 (46%), Gaps = 13/347 (3%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMW--LFSEMRNSGCRPDPSVYNALITAHLHTR 194
+Q Y +D YS +I + +K + A+ L+ E+ D + N +I
Sbjct: 225 RQDGYPSDFVNYSLIIRSLMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAKAG 284
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
D +KAL + LG Q G+ +V L C R V + A+F+E+ ++ L P
Sbjct: 285 DLSKAL-EFLGVVQG-SGLSVKTATLVAVIWALGNCG--RTV-EAEAIFEEMRDNGLKPR 339
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
YN ++ Y K G++K+ E V+S M+ + P+ T++ LID+YG ++ V K
Sbjct: 340 TRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLK 399
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT---PSFITYECIITMYG 371
+ S +P F+ ++ +Y R +G+ + FQ + M+ + P + Y +I +G
Sbjct: 400 EMEASNVQPNAYVFSRILSSY---RDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFG 456
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ + A FD + G + T N +++ +C G A+ LFE G +P ++
Sbjct: 457 KFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNT 516
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
T+ ++ ++ + V+ LL M G+VPN + ++ + S
Sbjct: 517 TFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKS 563
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 148/344 (43%), Gaps = 5/344 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D + + +I K G A+ ++ SG SV A + A + +A
Sbjct: 269 DVQLSNDIIVGFAKAGDLSKALEFLGVVQGSGL----SVKTATLVAVIWALGNCGRTVEA 324
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F++M+ KP YN LLR +A + + E+ S ++P+ TY+ ++D
Sbjct: 325 EAIFEEMRD-NGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLID 383
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
AYG G + VL M+++ +P+ F+ ++ SY + + K QV + + +S +P
Sbjct: 384 AYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRP 443
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+N MI +GK A F +M + P +T+ +I + RA E+F
Sbjct: 444 DRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELF 503
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+E+ + G +T N M+ ++ + L + + G+ P+S TY L Y K+
Sbjct: 504 EEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKS 563
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSA 487
+ L M+ G+ P+ + + ++ Q+ SA
Sbjct: 564 GRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSA 607
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 139/321 (43%), Gaps = 9/321 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS LI G G+ A + EM S +P+ V++ +++++ RDK + F
Sbjct: 378 YSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSY---RDKGEWQKS----F 430
Query: 208 QKMKGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
Q ++ ME +P+ V YN+++ + +D A F + + PD T+N ++D +
Sbjct: 431 QVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCH 490
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ G E + M P TFN++I+S+G ++ +D ++ + + P
Sbjct: 491 CRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNS 550
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+ ++I YGK+ A M A PS Y +I Y +A F
Sbjct: 551 VTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSAFRA 610
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ G + LN+++ A+ + EA + + + PD TY L KA +
Sbjct: 611 MRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYTTLMKALIRVEK 670
Query: 446 KELVQKLLKRMEQNGIVPNKR 466
+ V + + M +G P+++
Sbjct: 671 FDKVPSVYEEMILSGCTPDRK 691
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 142/336 (42%), Gaps = 12/336 (3%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
V W+QK + +YS LI +G+ + A +L S+ +N P YNALI+A
Sbjct: 154 VVLWLQKHNLCFSYELLYSILIHALGQSEKLYEA-FLLSQRQNLT----PLTYNALISAC 208
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ--VNALFKELHE 248
D L KAL +M+ + + V Y++++R+ + VD + L++E+
Sbjct: 209 ARNND----LEKALNLITRMR-QDGYPSDFVNYSLIIRSLMRKNRVDSAILQKLYREIEC 263
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
L D+ N ++ + K G + + L ++ + T +I + G +
Sbjct: 264 DKLELDVQLSNDIIVGFAKAGDLSKALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTVE 323
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
E +F+ + + KP +N+++ Y KA L AE+V +M +P+ TY +I
Sbjct: 324 AEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLID 383
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
YG AR + E+ + +L +Y G ++ + N GV P
Sbjct: 384 AYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRP 443
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
D Y ++ + K N + RM GI P+
Sbjct: 444 DRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPD 479
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 116/255 (45%), Gaps = 7/255 (2%)
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y+IL+ A Q+ + + L + + L P TYN ++ A +N +++ ++++RM+
Sbjct: 171 YSILIHALGQSEKLYEAFLLSQRQN---LTP--LTYNALISACARNNDLEKALNLITRMR 225
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDK--MEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
+ D + ++L+I S ++ D ++++++ + K + + N +I+ + KA
Sbjct: 226 QDGYPSDFVNYSLIIRSLMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAKAGD 285
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
KA + + T +I G C A IF+E+ G + NA
Sbjct: 286 LSKALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNA 345
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+L Y GL +A+ + GV+P+ TY L AY A E + +LK ME +
Sbjct: 346 LLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASN 405
Query: 461 IVPNKRFFLEALETF 475
+ PN F L ++
Sbjct: 406 VQPNAYVFSRILSSY 420
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 152/330 (46%), Gaps = 13/330 (3%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
++ + Y+ LI ++G+ A+ + M ++ CRP+ YN LI K
Sbjct: 382 EKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGF----SKR 437
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
K + KA+ KM + P++VTYN L+ +A + D L L E+ L PD +T
Sbjct: 438 KHVHKAMTLLSKMLE-SKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWT 496
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y+ +D K+ ++E + + +K K + + + LID + K D+ + + M
Sbjct: 497 YSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLER-M 555
Query: 318 HSKE-KPTLPTFNSMIINYGKARLQGKAEY---VFQKMTAMKYTPSFITYECIITMYGYC 373
HS++ P T+NS+I YG + +GK + + + M+ M P+ TY +I
Sbjct: 556 HSEDCLPNSSTYNSLI--YGVCK-EGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLRE 612
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ A +F+++ G V T A + YC +G EA+ + GV PDS TY
Sbjct: 613 GDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTY 672
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
LL AY + + +LKRM G P
Sbjct: 673 TLLISAYERLGLAYDAFNVLKRMLDAGCDP 702
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 157/367 (42%), Gaps = 42/367 (11%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I + + G+ + LF +MR C P Y +I A L D+ + + F
Sbjct: 287 YTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHA-LFGNDRN---LEGMDLF 342
Query: 208 QKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+M+ ER C+PN+ TY +++ A + R +D+ + E+ E L P + TYN ++ Y
Sbjct: 343 NEMR--ERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYC 400
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+ G I+ +L M+SN C+P+ T+N LI + KR+ K + ++ SK P+L
Sbjct: 401 EEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLV 460
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT-------MYGYCDNVSRA 379
T+NS+I KA A + + P TY I M CD +
Sbjct: 461 TYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSL 520
Query: 380 RE------------IFDELSKLGK-DMKVS---------------TLNAMLEAYCMNGLP 411
+E + D K GK D +S T N+++ C G
Sbjct: 521 KEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKV 580
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
E + EN MGV P +TY +L + + + ++ +M G P+ +
Sbjct: 581 QEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAF 640
Query: 472 LETFSSS 478
+ T+ +S
Sbjct: 641 IHTYCTS 647
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 145/322 (45%), Gaps = 7/322 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D+ Y+ LI + A +F+ M N GCR + Y +I H +A + +
Sbjct: 248 DSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTII----HGLCEAGRIDEG 303
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRAC-AQARNVDQVNALFKELHESILAPDIYTYNGVM 262
+ F+KM+ + C P + TY +++ A RN++ ++ LF E+ E P+++TY ++
Sbjct: 304 ISLFKKMRE-DDCYPTVRTYTVIIHALFGNDRNLEGMD-LFNEMRERSCEPNVHTYTVMV 361
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
DA K + E +L+ M P ++T+N LI Y + + ++ + + +
Sbjct: 362 DAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCR 421
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P T+N +I + K + KA + KM K TPS +TY +I + + A ++
Sbjct: 422 PNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKL 481
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
D L + G T + ++ C + EA LF + G+ + Y L + K
Sbjct: 482 LDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCK 541
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
A + LL+RM +PN
Sbjct: 542 AGKIDEAISLLERMHSEDCLPN 563
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 8/220 (3%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+ + L KS + + ++F + K++ A+ +Y+ LI K G+ A+ L M +
Sbjct: 499 VFIDTLCKSKRMEEACDLFNSL-KEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHS 557
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
C P+ S YN+LI + K + + L + M M KP + TY IL+ +
Sbjct: 558 EDCLPNSSTYNSLI----YGVCKEGKVQEGLSMVENMSKMG-VKPTVATYTILIEEMLRE 612
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ D N +F ++ PD+YTY + Y +G +KE E +++RM PD +T+
Sbjct: 613 GDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTY 672
Query: 294 NLLIDSYGKRQ-AFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
LLI +Y + A+D V K ++ + P+ P +N++I
Sbjct: 673 TLLISAYERLGLAYDAF-NVLKRMLDAGCDPSHPIWNNLI 711
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 117/260 (45%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
K ++ +YN LL A+ +D++ ++ E+ ++ P+IYT N +++AY K G I E
Sbjct: 176 KLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANL 235
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+S++ PD T+ LI Y + + +VF + + + ++ ++I
Sbjct: 236 YVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLC 295
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
+A + +F+KM P+ TY II D ++F+E+ + + V
Sbjct: 296 EAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVH 355
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
T M++A C E+ + G+ P TY L + Y + E ++L M
Sbjct: 356 TYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLM 415
Query: 457 EQNGIVPNKRFFLEALETFS 476
E N PN+R + E + FS
Sbjct: 416 ESNNCRPNERTYNELICGFS 435
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 127/316 (40%), Gaps = 45/316 (14%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN--------- 268
PNI T N ++ A ++ N+ + N ++ ++ L+PD +TY ++ Y +N
Sbjct: 212 PNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKV 271
Query: 269 --------------------------GMIKEMESVLSRMKSNQCKPDIITFNLLIDS-YG 301
G I E S+ +M+ + C P + T+ ++I + +G
Sbjct: 272 FNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFG 331
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
+ + M+ +F + +P + T+ M+ K R ++ + +M PS +
Sbjct: 332 NDRNLEGMD-LFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVV 390
Query: 362 TYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
TY +I GYC+ + A EI + T N ++ + +A L
Sbjct: 391 TYNALIR--GYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLS 448
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSL 479
+TP TY L KA + KLL +++NG+VP++ + F +L
Sbjct: 449 KMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTY----SVFIDTL 504
Query: 480 AGSQSGSAKTDLTRSL 495
S+ DL SL
Sbjct: 505 CKSKRMEEACDLFNSL 520
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 170/353 (48%), Gaps = 14/353 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
++ ++G+S W + LE+ M+ + + D S +I+ G++G A +E++ +
Sbjct: 259 VYGKMGRS--WDRILELLDEMRSKGLEL-DEFTCSTVISACGREGMLDEARKFLAELKFN 315
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G +P YN++ L KA +AL ++M+ C P+ VTYN L +A
Sbjct: 316 GYKPGTVTYNSM----LQVFGKAGIYTEALSILKEMED-NNCPPDSVTYNELAATYVRAG 370
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+D+ A+ + + P+ TY V+DAYGK G + + S MK C P++ T+N
Sbjct: 371 FLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYN 430
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++ GK+ + + +V + + P T+N+M+ +GK YV + + M
Sbjct: 431 SVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTML---AVCSEEGKHNYVNKVLREM 487
Query: 355 K---YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
K + P T+ +I+ Y C + + +++ E+ K G V+T NA+L A G
Sbjct: 488 KNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDW 547
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A+ + ++ G P+ ++Y LL Y+KA + ++K+ K + + P+
Sbjct: 548 KAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPS 600
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 159/371 (42%), Gaps = 44/371 (11%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I GK G+ A+ LFS M++ GC P+ YN+++ A L + + + + K L
Sbjct: 394 YTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVL-AMLGKKSRTEDVIKVLC-- 450
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD------------- 254
+MK + C PN T+N +L C++ + VN + +E+ PD
Sbjct: 451 -EMK-LNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYAR 508
Query: 255 ----------------------IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+ TYN +++A + G K ESV+ M++ KP+ +
Sbjct: 509 CGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENS 568
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
++LL+ Y K +E+V K + P+ ++++ K R E F ++
Sbjct: 569 YSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQ 628
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
Y P + +++M+ S+ARE+ + + G + T N +++ Y G
Sbjct: 629 KYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECW 688
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
+A+ + + N G PD +Y + K + + + + +L M GI P +
Sbjct: 689 KAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPT----IVTY 744
Query: 473 ETFSSSLAGSQ 483
TF S AG +
Sbjct: 745 NTFLSGYAGME 755
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 138/318 (43%), Gaps = 5/318 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ ++AV ++G+ + EM+N G PD +N LI+A+ + + AK G
Sbjct: 464 WNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDS-AKMYGEM 522
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K G C + TYN LL A A+ + ++ +++ P+ +Y+ ++ Y K
Sbjct: 523 VK-SGFTPC---VTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSK 578
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G +K +E V + P I L+ + K + ME+ F L KP L
Sbjct: 579 AGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVV 638
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
NSM+ + + ++ KA + + P+ TY C++ +Y +A E+ +
Sbjct: 639 INSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQ 698
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G + V + N +++ +C GL EA + G+ P TY Y + +
Sbjct: 699 NSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFD 758
Query: 448 LVQKLLKRMEQNGIVPNK 465
++++ M ++ P++
Sbjct: 759 EANEVIRFMIEHNCRPSE 776
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 131/283 (46%), Gaps = 42/283 (14%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA---KALAKAL 204
Y+ L+ + ++G + A + +MR G +P+ + Y+ L LH KA K + K
Sbjct: 534 YNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLL----LHCYSKAGNVKGIEKVE 589
Query: 205 -----GYF-----------------QKMKGMERC---------KPNIVTYNILLRACAQA 233
G+ + ++GMER KP++V N +L A+
Sbjct: 590 KEIYDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARN 649
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ + + +HE L P+++TYN +MD Y + G + E VL ++++ +PD++++
Sbjct: 650 KMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSY 709
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N +I + ++ + V + +PT+ T+N+ + Y L +A V + M
Sbjct: 710 NTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIE 769
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
PS +TY+ ++ GYC + E D +SK+ K++ +S
Sbjct: 770 HNCRPSELTYKILVD--GYC-KAGKYEEAMDFVSKI-KELDIS 808
>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 687
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 148/320 (46%), Gaps = 8/320 (2%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGI-YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSV 182
+W++ LE+ + M Q IA I Y+ + K GQ A+ L M G PD
Sbjct: 372 RWVEALELLKEMPAQ--GIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIIS 429
Query: 183 YNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL 242
+N+ I A + + A+ ++M PN++TYN + AC ++ + L
Sbjct: 430 FNSAIDAC----GRGQQWETAVELLREMP-TAGLTPNVITYNSAIEACGRSARWQEAMGL 484
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
F+E+ L+P++ TYN ++DA K + +L+ M + PD+I++N I++ GK
Sbjct: 485 FREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGK 544
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ ++ Q+ K + KP + ++NS + K+ +A + + M + TP+ ++
Sbjct: 545 GEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVS 604
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y I G + A I E+ G + T +A ++A G EA L +
Sbjct: 605 YGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLR 664
Query: 423 NMGVTPDSSTYKLLYKAYTK 442
G+TPD+ TY + A+ +
Sbjct: 665 RQGLTPDAQTYLTVISAFQR 684
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/455 (22%), Positives = 183/455 (40%), Gaps = 49/455 (10%)
Query: 70 RGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCL 129
+GR+ EE L V+ + F P RT N + + K +WL+ +
Sbjct: 229 KGRRWEEAMDL-LEEVIEQGFP---PSTRTYNPVI------------DACAKGGRWLEAM 272
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
++ M AD YS +IA G+ + + AM L +MR G P+ YN+ I A
Sbjct: 273 DLLGQMLTND-IPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDA 331
Query: 190 HLHTRDKAKAL-------------------------------AKALGYFQKMKGMERCKP 218
+AL +AL ++M + P
Sbjct: 332 CAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPA-QGIAP 390
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
N ++YN L ACA+ ++ L + + PDI ++N +DA G+ + +L
Sbjct: 391 NTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELL 450
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
M + P++IT+N I++ G+ + + +F+ + P + T+NSMI K
Sbjct: 451 REMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKG 510
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
A + M A P I+Y I G + A ++ + G + +
Sbjct: 511 EQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISY 570
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N+ + A +G EA L ++ +G+TP++ +Y A K ++ ++LK M+
Sbjct: 571 NSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQT 630
Query: 459 NGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTR 493
+G PN + A++ + ++ TDL R
Sbjct: 631 HGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRR 665
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 151/357 (42%), Gaps = 8/357 (2%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM--RNSGCRPDPS 181
+W + + R M + D Y+ IA K G+ + AM L ++M G PD
Sbjct: 125 QWATAVRLLREMPTEG-VTPDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVV 183
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
YN+ I A +A+ ++M + PN++TYN + ACA+ R ++
Sbjct: 184 TYNSAIAAC----SNGGRWKEAMDLLEQMVA-QGVPPNLITYNSAIGACAKGRRWEEAMD 238
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
L +E+ E P TYN V+DA K G E +L +M +N D+I+++ +I + G
Sbjct: 239 LLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACG 298
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
+ + + + + + + P + ++NS I K +A + ++MT + P+ I
Sbjct: 299 RGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVI 358
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
+Y A E+ E+ G + N+ L+A G +A L
Sbjct: 359 SYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGM 418
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+G PD ++ A + E +LL+ M G+ PN + A+E S
Sbjct: 419 STVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRS 475
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 142/332 (42%), Gaps = 24/332 (7%)
Query: 144 DTGIYSKL--IAVMGKKGQTRLAMWLFSEMRNS-GCRPDPSVYNALITAHLHTRDKAKAL 200
D G+ + + V+ ++G+ L S S G +P V I RD AL
Sbjct: 36 DAGVSGEATRLGVLSRRGEGSLEPSTRSRGAASRGGKPKSLVKLKSILLEAKGRDWRTAL 95
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
A AL F+ G + +YNI + AC+ R L +E+ + PD+ TYN
Sbjct: 96 A-ALDEFKISGG----SLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNS 150
Query: 261 VMDAYGKNGMIKEMESVLSRM--KSNQCKPDIITFNLLID--SYGKR--QAFDKMEQVFK 314
+ A K G KE +L++M + PD++T+N I S G R +A D +EQ
Sbjct: 151 AIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQ--- 207
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
++ P L T+NS I K R +A + +++ + PS TY +I C
Sbjct: 208 -MVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDA---CA 263
Query: 375 NVSRAREIFDELSK-LGKDMKVSTLN-AMLEAYCMNGLP-TEADLLFENSHNMGVTPDSS 431
R E D L + L D+ ++ + + A C G EA L E GV+P+
Sbjct: 264 KGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVI 323
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
+Y A K + + LL+ M G+VP
Sbjct: 324 SYNSAIDACAKGDRWKEALDLLREMTTVGLVP 355
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 115/263 (43%), Gaps = 12/263 (4%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
+ G+ +W +E+ R M + Y+ I G+ + + AM LF EM G
Sbjct: 434 IDACGRGQQWETAVELLREMPTAG-LTPNVITYNSAIEACGRSARWQEAMGLFREMPTRG 492
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
P+ YN++I A + + LA L +G+ P++++YN + AC +
Sbjct: 493 LSPNVVTYNSMIDAC--AKGEQWELAVQLLTGMPARGV---APDVISYNSAIEACGKGEQ 547
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
+ L K + PDI +YN + A K+G +E +L M + P+ +++
Sbjct: 548 WELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGA 607
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
I + GK + +D ++ K + P L T+++ I K QG+ + +T ++
Sbjct: 608 AIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAK---QGRWKEAVDLLTDLR 664
Query: 356 ---YTPSFITYECIITMYGYCDN 375
TP TY +I+ + C +
Sbjct: 665 RQGLTPDAQTYLTVISAFQRCSD 687
>gi|410110081|gb|AFV61120.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
camara]
Length = 381
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 133/276 (48%), Gaps = 5/276 (1%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
D +YS LI + K A+ +FS ++ SG PD YNA+I KAK +
Sbjct: 2 GDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVF----GKAKLFRE 57
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A +MK PN +Y+ LL + + + ++F E+ E D+ T N ++
Sbjct: 58 ARSLISEMK-TAGVXPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMI 116
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D YG+ GM KE + + M+ +P+++++N L+ YG + F + +F+ + +
Sbjct: 117 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 176
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
+ T+NSMI+ YGK KA + Q+M + P+ ITY II+++G + RA +
Sbjct: 177 QNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAML 236
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
F +L G ++ M+ AY GL A L
Sbjct: 237 FQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLL 272
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 130/263 (49%), Gaps = 1/263 (0%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+KA+ F ++K P++V YN ++ +A+ + +L E+ + + P+ +Y+
Sbjct: 21 SKAISIFSRLK-RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVXPNTTSYST 79
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ Y +N E SV S M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 80 LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 139
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P + ++N+++ YG A L G+A ++F+ M + +TY +I +YG +A
Sbjct: 140 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKAN 199
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ E+ G + T + ++ + G A +LF+ + GV D ++ + AY
Sbjct: 200 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY 259
Query: 441 TKANMKELVQKLLKRMEQNGIVP 463
+A + ++LL +++ +P
Sbjct: 260 ERAGLVAHAKRLLHELKRPDNIP 282
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 151/343 (44%), Gaps = 15/343 (4%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L SEM+ +G P+ + Y+ L+T ++
Sbjct: 31 KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVXPNTTSYSTLLTMYVEN--- 87
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
K +AL F +M+ + +C ++ T NI++ Q + + LF + + + P++
Sbjct: 88 -KKFLEALSVFSEMREI-KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVV 145
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+YN ++ YG + E + M+ + +++T+N +I YGK +K + + +
Sbjct: 146 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEM 205
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P T++++I +GK +A +FQK+ + I ++ +I Y V
Sbjct: 206 QSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLV 265
Query: 377 SRAREIFDELSK---LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ A+ + EL + + +D + L G EA +F + + G D + +
Sbjct: 266 AHAKRLLHELKRPDNIPRDTAIHILAGA-------GRIEEATYVFRQAIDAGEVKDITVF 318
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+ + +K V ++ +M G P+ L +
Sbjct: 319 ERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVITVVLNAYG 361
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 119/250 (47%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
++V Y+ L+ + + + ++F L S PD+ YN +++ +GK + +E S++
Sbjct: 3 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 62
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
S MK+ P+ +++ L+ Y + + F + VF + K L T N MI YG+
Sbjct: 63 SEMKTAGVXPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 122
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
+ +A+ +F M M P+ ++Y ++ +YG + A +F + + + V T
Sbjct: 123 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 182
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N+M+ Y +A+ L + + G+ P+S TY + + K + L +++
Sbjct: 183 NSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 242
Query: 459 NGIVPNKRFF 468
+G+ ++ F
Sbjct: 243 SGVEIDQILF 252
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 129/301 (42%), Gaps = 37/301 (12%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
++ K+L+ L VF M++ + + D + +I V G+ G + A LF MR G P+
Sbjct: 86 ENKKFLEALSVFSEMREIKCLL-DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 144
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
YN L L A+ +A+ F+ M+ + + N+VTYN ++ + ++ N
Sbjct: 145 VSYNTL----LRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVTYNSMIMIYGKTLEHEKAN 199
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
L +E+ + P+ TY+ ++ +GK G + + +++S+ + D I F +I +Y
Sbjct: 200 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY 259
Query: 301 --------GKRQAFD--------------------KMEQ---VFKSLMHSKEKPTLPTFN 329
KR + ++E+ VF+ + + E + F
Sbjct: 260 ERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFE 319
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
MI K + VF KM + Y P ++ YG +A +++ E+ ++
Sbjct: 320 RMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVITVVLNAYGKLQEFDKANDVYMEMQEV 379
Query: 390 G 390
G
Sbjct: 380 G 380
>gi|357144696|ref|XP_003573383.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Brachypodium distachyon]
Length = 606
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 172/396 (43%), Gaps = 26/396 (6%)
Query: 78 ESKELVRVLMRSFSDKEPLVR--TLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWM 135
ES V +L S KEPL R L V+ F++L KW E+ W+
Sbjct: 85 ESGSAVSILKTQRSTKEPLPRDAVLGTLVR----------FKQL---KKWNLVSEILEWL 131
Query: 136 QKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRD 195
+ Q W+ + L+ GK G A + M G RP AL+ A+
Sbjct: 132 RTQHWWDFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYRPTVISQTALMEAY----G 187
Query: 196 KAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL---HESILA 252
+AK KA F +M+ +P+ +TY I+L++ + + A+F++L +
Sbjct: 188 RAKQYRKAEAVFHRMQ-TSGPEPSPITYQIILKSLVEGDKYKEAEAIFEDLLSEKRTFFK 246
Query: 253 PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
PD ++ ++ Y K+G + + ++M +TFN L+ G + ++ +
Sbjct: 247 PDQKMFHMMIYMYKKSGDYAQARKLFAQMSERGIPQSTVTFNSLMSFEGD---YKEVSSI 303
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGY 372
+ + + KP + +++ +I YGKAR + +A VF++M P+ +Y ++ +
Sbjct: 304 YDQMQRAGLKPDVVSYSLLIKAYGKARREEEASAVFEEMLDAGIRPTRKSYNILLDAFAI 363
Query: 373 CDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
V A+ +F + + + + + ML AY A+ F G+ P+
Sbjct: 364 SGLVEEAQTVFKTMRRHRVEPDLCSYTTMLLAYVNASDMDGAEKFFRRIKEDGLRPNVVV 423
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
Y L K Y+K + E V ++ +RM G+ PN+ F
Sbjct: 424 YGTLMKGYSKLDNVEKVMRVYERMRMQGVEPNQTIF 459
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 141/281 (50%), Gaps = 14/281 (4%)
Query: 114 LLFEELGKSDKWLQCLEVFRWM--QKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM 171
++ + L + DK+ + +F + +K+ ++ D ++ +I + K G A LF++M
Sbjct: 216 IILKSLVEGDKYKEAEAIFEDLLSEKRTFFKPDQKMFHMMIYMYKKSGDYAQARKLFAQM 275
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERC--KPNIVTYNILLRA 229
G +N+L++ ++ + + M+R KP++V+Y++L++A
Sbjct: 276 SERGIPQSTVTFNSLMSFEGDYKEVSSIYDQ----------MQRAGLKPDVVSYSLLIKA 325
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
+AR ++ +A+F+E+ ++ + P +YN ++DA+ +G+++E ++V M+ ++ +PD
Sbjct: 326 YGKARREEEASAVFEEMLDAGIRPTRKSYNILLDAFAISGLVEEAQTVFKTMRRHRVEPD 385
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
+ ++ ++ +Y D E+ F+ + +P + + +++ Y K K V++
Sbjct: 386 LCSYTTMLLAYVNASDMDGAEKFFRRIKEDGLRPNVVVYGTLMKGYSKLDNVEKVMRVYE 445
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
+M P+ + I+ ++G + A F+E+ G
Sbjct: 446 RMRMQGVEPNQTIFTTIMDVHGRNSDFGNAVIWFNEMETRG 486
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 108/221 (48%), Gaps = 6/221 (2%)
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ AYGK G E VL M +P +I+ L+++YG+ + + K E VF + S
Sbjct: 147 LVTAYGKLGDFSRAERVLKYMNKKGYRPTVISQTALMEAYGRAKQYRKAEAVFHRMQTSG 206
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT---PSFITYECIITMYGYCDNVS 377
+P+ T+ ++ + + +AE +F+ + + K T P + +I MY + +
Sbjct: 207 PEPSPITYQIILKSLVEGDKYKEAEAIFEDLLSEKRTFFKPDQKMFHMMIYMYKKSGDYA 266
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
+AR++F ++S+ G T N+++ G E +++ G+ PD +Y LL
Sbjct: 267 QARKLFAQMSERGIPQSTVTFNSLM---SFEGDYKEVSSIYDQMQRAGLKPDVVSYSLLI 323
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
KAY KA +E + + M GI P ++ + L+ F+ S
Sbjct: 324 KAYGKARREEEASAVFEEMLDAGIRPTRKSYNILLDAFAIS 364
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 160/369 (43%), Gaps = 30/369 (8%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L D+ + L++F M K + ++ L+ + ++G+ A+ L M
Sbjct: 154 LLHGLCVEDRISEALDLFHQMCK-----PNVVTFTTLMNGLCREGRVVEAVALLDRMLED 208
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRAC---- 230
G +P+ Y ++ D AL +KM+ + KPN+V + + R C
Sbjct: 209 GLQPNQITYGTIVDGMCKMGDTVSAL----NLLRKMEEVSHIKPNVVIWPLERRTCMING 264
Query: 231 --AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
+ R + L + L ++PD+ TYN +++A+ K G E E + M P
Sbjct: 265 FCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 324
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
IT++ +ID + K+ D E +F + P + TFN++I Y +A+ +
Sbjct: 325 STITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLL 384
Query: 349 QKMTAMKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+MT + ITY +I +G+C +++ A+++ E+ G V T N +L+ C
Sbjct: 385 HEMTEAGLVANTITYTTLI--HGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLC 442
Query: 407 MNGLPTEADLLF----------ENSHNM-GVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
NG +A +F + SH GV PD TY +L ++L +
Sbjct: 443 DNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 502
Query: 456 MEQNGIVPN 464
M GIVP+
Sbjct: 503 MPHRGIVPD 511
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 158/359 (44%), Gaps = 26/359 (7%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
S +W + ++ + M +++ D Y+ LI K+G+ A L+ EM G P
Sbjct: 268 SGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTI 327
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
Y+++I +++ A A+ + Y KG C P+I+T+N L+ +A+ VD
Sbjct: 328 TYSSMIDGFCK-QNRLDA-AEHMFYLMATKG---CSPDIITFNTLIAGYCRAKRVDDGIK 382
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
L E+ E+ L + TY ++ + + G + + +L M S+ P+++T N L+D
Sbjct: 383 LLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLC 442
Query: 302 KRQAFDKMEQVFKSLMHSK-----------EKPTLPTFNSMI---INYGKARLQGKAEYV 347
++FK++ SK +P + T+N +I IN GK +AE +
Sbjct: 443 DNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFL---EAEEL 499
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+++M P ITY +I +G C + A ++FD + V T ++ Y
Sbjct: 500 YEEMPHRGIVPDTITYNSVI--HGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 557
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
C G + LF G+ ++ TY L + K + + M +G+ P+
Sbjct: 558 CKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPD 616
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 149/346 (43%), Gaps = 22/346 (6%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
K K+ + E++ M R I T YS +I K+ + A +F M GC PD
Sbjct: 303 KEGKFFEAEELYDEMLP-RGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDI 361
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQ 238
+N LI + +AK + + +M G+ N +TY L+ Q +++
Sbjct: 362 ITFNTLIAGYC----RAKRVDDGIKLLHEMTEAGL---VANTITYTTLIHGFCQVGDLNA 414
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS-----------NQCK 287
L +E+ S + P++ T N ++D NG +K+ + M+ N +
Sbjct: 415 AQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVE 474
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
PD+ T+N+LI F + E++++ + H P T+NS+I K +A +
Sbjct: 475 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQM 534
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F M + ++P+ +T+ +I Y V E+F E+ + G T ++ +
Sbjct: 535 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRK 594
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYK-LLYKAYTKANMKELVQKL 452
G A +F+ GV PD+ T + +L ++K +K V L
Sbjct: 595 VGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAML 640
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 16/204 (7%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYI----------ADTGIYSKLIAVMGKKGQT 161
C L + L + K LE+F+ MQK + I D Y+ LI+ + +G+
Sbjct: 434 CNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKF 493
Query: 162 RLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV 221
A L+ EM + G PD YN++I H K L +A F M G + PN+V
Sbjct: 494 LEAEELYEEMPHRGIVPDTITYNSVI----HGLCKQSRLDEATQMFDSM-GSKSFSPNVV 548
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
T+ L+ +A VD LF E+ + + TY ++ + K G I + M
Sbjct: 549 TFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEM 608
Query: 282 KSNQCKPDIITF-NLLIDSYGKRQ 304
++ PD IT N+L + K +
Sbjct: 609 MASGVYPDTITIRNMLTGLWSKEE 632
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 121/289 (41%), Gaps = 16/289 (5%)
Query: 196 KAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
+ K L A+ F M R P+++ + L+ + +D V +L +++ + +
Sbjct: 55 EIKGLEDAIDLFGDMV-RSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNA 113
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
Y++ +M + + S ++ P ++TF+ L+ D++ +
Sbjct: 114 YSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVE---DRISEAL-D 169
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC-- 373
L H KP + TF +++ + +A + +M P+ ITY I+ G C
Sbjct: 170 LFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVD--GMCKM 227
Query: 374 -DNVSRAREI--FDELSKLGKDMKVSTL---NAMLEAYCMNGLPTEA-DLLFENSHNMGV 426
D VS + +E+S + ++ + L M+ +C +G +EA LL E +
Sbjct: 228 GDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKI 287
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+PD TY L A+ K ++L M GI+P+ + ++ F
Sbjct: 288 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGF 336
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 18/168 (10%)
Query: 90 FSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYS 149
F+ EP V+T N +L L K+L+ E++ M R + DT Y+
Sbjct: 470 FNGVEPDVQTYN------------ILISGLINEGKFLEAEELYEEM-PHRGIVPDTITYN 516
Query: 150 KLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQK 209
+I + K+ + A +F M + P+ + LI + KA + L F +
Sbjct: 517 SVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC----KAGRVDDGLELFCE 572
Query: 210 MKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
M G N +TY L+ + N++ +F+E+ S + PD T
Sbjct: 573 M-GRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTIT 619
>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
Length = 770
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 158/338 (46%), Gaps = 11/338 (3%)
Query: 131 VFRWMQKQ--RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
V R +++ R+ + + + I + K+G+ A ++ + G + + NALI
Sbjct: 411 VLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALI- 469
Query: 189 AHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
H + + +A + M G+E + +TYNI+++ C +A +++ L ++
Sbjct: 470 ---HGLCQGNNMKEATKVLKAMVDSGVEF---DRITYNIMIQFCCKASKMEEAIQLRDDM 523
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
+ PD++T+N + AY G ++++ +L +MKS KPDI+T+ +ID Y K +
Sbjct: 524 IKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDV 583
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
K + L+ + +P +N++I YG+ A V M P+ ITY +
Sbjct: 584 HKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSL 643
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
+ + V A+EIF + ++ V +++ +C G EA + F+ H +
Sbjct: 644 MYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDI 703
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
P+ TY L AY K KE KL M +GIVP+
Sbjct: 704 RPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPD 741
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 123/249 (49%), Gaps = 2/249 (0%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHE-SILAPDIYTYNGVMDAYGKNGMIKEMES 276
P+I T NIL+ A +D +F E+ + + +APD+YTY ++ A + G I
Sbjct: 178 PSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFV 237
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+L+ ++ + +P ++T+N+L+D+ + ++ Q+ ++ + +P++ TF +I
Sbjct: 238 MLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLA 297
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
+ + G+ + V Q+M TP+ + Y +I + + S A +FDE+ G V
Sbjct: 298 RGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVV 357
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK-ELVQKLLKR 455
T N + +A C G A+ + + G+T S + + + + + ++V +L++
Sbjct: 358 TYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIRE 417
Query: 456 MEQNGIVPN 464
M + PN
Sbjct: 418 MVARFLKPN 426
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 122/271 (45%), Gaps = 11/271 (4%)
Query: 142 IADTGI------YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRD 195
+ D+G+ Y+ +I K + A+ L +M G +PD +N + A+ +
Sbjct: 488 MVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNL-- 545
Query: 196 KAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
+ L +MK E KP+IVTY ++ +A++V + N EL ++ L P+
Sbjct: 546 --GKVEDILHLLDQMKS-EGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNA 602
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
YN ++ YG+NG I + VL MK N +P IT+N L+ ++ +++F
Sbjct: 603 VIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQ 662
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
+ + + + +I + K +A F++M P+ +TY ++ Y C N
Sbjct: 663 CILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGN 722
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
A ++FDE+ G + N ++ C
Sbjct: 723 KEEAFKLFDEMVSSGIVPDTVSYNTLISGCC 753
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 146/383 (38%), Gaps = 55/383 (14%)
Query: 117 EELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGC 176
+ G+ D LQ +E F + IY++LI ++G A+ LF EM + G
Sbjct: 300 QRFGEVDAVLQEMEGFGITPNEV-------IYNQLIGWHCREGHCSEALRLFDEMVSKGI 352
Query: 177 RPDPSVYN------------------------ALITAHL---------HTRDKAKALAKA 203
+ YN A +T H H R + L
Sbjct: 353 KQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGR-LDVV 411
Query: 204 LGYFQKMKGMERCKPN-IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
L ++M KPN V + C + ++ + F L + L +I T N ++
Sbjct: 412 LRLIREMVA-RFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKG-LGVNIATSNALI 469
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+ +KE VL M + + D IT+N++I K ++ Q+ ++ K
Sbjct: 470 HGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFK 529
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECIITMYGYCDNVSRA 379
P L TFN+ + Y GK E + + MK P +TY II Y +V +A
Sbjct: 530 PDLFTFNTFLRAYCNL---GKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKA 586
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+ EL K G NA++ Y NG ++A + + + G+ P TY L
Sbjct: 587 NKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYW 646
Query: 440 YTKANMKE-----LVQKLLKRME 457
A + E Q +LK +E
Sbjct: 647 MCHAGLVEEAKEIFAQCILKNIE 669
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 111/252 (44%), Gaps = 9/252 (3%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+R + D ++ + G+ + L +M++ G +PD Y +I + KA
Sbjct: 525 KRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYC----KA 580
Query: 198 KALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
K + KA Y ++ G+ +PN V YN L+ + ++ + + + + P
Sbjct: 581 KDVHKANKYLIELIKNGL---RPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTP 637
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
TYN +M G+++E + + ++ + +I + ++I + K D+ FK
Sbjct: 638 ITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKE 697
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
+ + +P T+ +++ Y K + +A +F +M + P ++Y +I+ D+
Sbjct: 698 MHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDS 757
Query: 376 VSRAREIFDELS 387
+ + E E+S
Sbjct: 758 LDKIVESPAEMS 769
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 147/310 (47%), Gaps = 18/310 (5%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
AM F EM+ SG PD Y+ L++A D + +A+A F M C P+I+TY
Sbjct: 160 AMEFFKEMKASGVEPDLESYHILLSA---LSDSGR-MAEAHALFSAMT----CSPDIMTY 211
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
N+L+ + + +L KE+ ++ P+++TY+ +++ Y K ++E V +M
Sbjct: 212 NVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIE 271
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG- 342
+ C P+ +TFN LI + K + ++F + K T+ T+N++I + K R G
Sbjct: 272 SNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKR-GGV 330
Query: 343 -KAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDM-KVSTL 398
A +F K+ TP+ +TY +I G+CD +S A + FDE+ GK V T
Sbjct: 331 YTAVDLFNKLEGAGLTPTIVTYNSLIQ--GFCDARRLSEAMQYFDEME--GKCAPNVITY 386
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
+ +++ C EA E+ G TP TY L + K + ++M+
Sbjct: 387 SILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKL 446
Query: 459 NGIVPNKRFF 468
G PN F
Sbjct: 447 AGCAPNTVIF 456
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 159/391 (40%), Gaps = 54/391 (13%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
+++ Q +E F+ M K D Y L++ + G+ A LFS M C PD
Sbjct: 154 ANRLEQAMEFFKEM-KASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIM 209
Query: 182 VYNALITAHLHTRD--KAKALAKAL---GYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
YN L+ + +A++L K + GY +PN+ TY+I++ + V
Sbjct: 210 TYNVLMDGYCKIGQTYEAQSLMKEILKAGY----------EPNVFTYSIIINCYCKLDKV 259
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
++ +F ++ ES P+ T+N ++ + K GM+++ + + M+ CK I+T+N L
Sbjct: 260 EEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTL 319
Query: 297 IDSYGK-RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR-----------LQGK- 343
IDS K R +F L + PT+ T+NS+I + AR ++GK
Sbjct: 320 IDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKC 379
Query: 344 ----------------------AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
A + M A YTP+ +TY +I + C + A
Sbjct: 380 APNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALL 439
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
F+++ G N +++ C + L + H G PD TY L
Sbjct: 440 FFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLC 499
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
AN E Q+L M V F + L
Sbjct: 500 SANRVEDAQRLFDGMACAPNVTTFNFLIRGL 530
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 161/368 (43%), Gaps = 47/368 (12%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L + K Q L +F+ + + + Y+ LI K GQ A+ +FS+M++S
Sbjct: 3 LLSGLVSARKHDQALRLFKEVLAG-LFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSS 61
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALA-------------------------------KA 203
G P+ S N L+ + AL A
Sbjct: 62 GLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDA 121
Query: 204 LGYFQKMKGMERCKPNIV--TYNILLRACA----QARNVDQVNALFKELHESILAPDIYT 257
L + Q M+ + ++ TYN++L+ A ++Q FKE+ S + PD+ +
Sbjct: 122 LAHLQDMR---KSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLES 178
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y+ ++ A +G + E ++ S M C PDI+T+N+L+D Y K + + + K ++
Sbjct: 179 YHILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEIL 235
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
+ +P + T++ +I Y K +A VF KM P+ +T+ +I + +
Sbjct: 236 KAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLE 295
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYC--MNGLPTEADLLFENSHNMGVTPDSSTYKL 435
A ++F E+ K+G + T N ++++ C G+ T D LF G+TP TY
Sbjct: 296 DAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVD-LFNKLEGAGLTPTIVTYNS 354
Query: 436 LYKAYTKA 443
L + + A
Sbjct: 355 LIQGFCDA 362
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 113/240 (47%), Gaps = 14/240 (5%)
Query: 148 YSKLIAVMGKK-GQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
Y+ LI + KK G A+ LF+++ +G P YN+LI A+ L++A+ Y
Sbjct: 316 YNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFC----DARRLSEAMQY 371
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F +M+G +C PN++TY+IL+ + R + + +++ P + TY G+++ +
Sbjct: 372 FDEMEG--KCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFC 429
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K G +K +MK C P+ + FN LID K + + ++ + KP +
Sbjct: 430 KCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVI 489
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFD 384
T+N +I A A+ +F M P+ T+ +I G C V AR I D
Sbjct: 490 TYNCLISGLCSANRVEDAQRLFDGMAC---APNVTTFNFLIR--GLCAQKKVEEARNILD 544
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 107/250 (42%), Gaps = 17/250 (6%)
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
N LL AR DQ LFKE+ + AP+ +TYN ++ + K G + + SV S MKS
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+ P+ T N L+ + +M K + P LPT S I + G+
Sbjct: 61 SGLLPNASTMNTLLLGLCE---IGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR 117
Query: 344 AEYVFQKMTAMKYTPSFI---TYECIITMYGYC------DNVSRAREIFDELSKLGKDMK 394
+ M+ + S + TY + + G C + + +A E F E+ G +
Sbjct: 118 VRDALAHLQDMRKSSSSVATGTYN--LVLKGLCWENKSANRLEQAMEFFKEMKASGVEPD 175
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
+ + + +L A +G EA LF M +PD TY +L Y K Q L+K
Sbjct: 176 LESYHILLSALSDSGRMAEAHALFS---AMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMK 232
Query: 455 RMEQNGIVPN 464
+ + G PN
Sbjct: 233 EILKAGYEPN 242
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 132/307 (42%), Gaps = 29/307 (9%)
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
NAL++ + R +AL + + + G+ PN TYN+L+R + + Q ++F
Sbjct: 1 NALLSGLVSARKHDQALRL---FKEVLAGLF--APNAHTYNVLIRGFCKGGQMHQAVSVF 55
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY--- 300
++ S L P+ T N ++ + G + + M++ P + N+L+ +
Sbjct: 56 SDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMA 115
Query: 301 GK-RQAFDKMEQVFKSLMHSKEKPTLPTFNSMII-----NYGKARLQGKAEYVFQKMTAM 354
G+ R A ++ + K S T+N ++ N RL+ E+ F++M A
Sbjct: 116 GRVRDALAHLQDMRK----SSSSVATGTYNLVLKGLCWENKSANRLEQAMEF-FKEMKAS 170
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P +Y +++ ++ A +F S + + T N +++ YC G EA
Sbjct: 171 GVEPDLESYHILLSALSDSGRMAEAHALF---SAMTCSPDIMTYNVLMDGYCKIGQTYEA 227
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
L + G P+ TY ++ Y K + E ++ +M ++ VPN T
Sbjct: 228 QSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAV-------T 280
Query: 475 FSSSLAG 481
F++ +AG
Sbjct: 281 FNTLIAG 287
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 8/142 (5%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K Y Y LI K G+ + A+ F +M+ +GC P+ ++N LI L ++
Sbjct: 410 KAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDG-LCKAER 468
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
A + L + E CKP+++TYN L+ A V+ LF + AP++
Sbjct: 469 ANDGLRLLCHMHA----EGCKPDVITYNCLISGLCSANRVEDAQRLFDGMA---CAPNVT 521
Query: 257 TYNGVMDAYGKNGMIKEMESVL 278
T+N ++ ++E ++L
Sbjct: 522 TFNFLIRGLCAQKKVEEARNIL 543
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 155/341 (45%), Gaps = 24/341 (7%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS L+ K+ + A+ L EMR+ GC PD YN LI A D +AL K L
Sbjct: 198 YSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEAL-KVLNSL 256
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
CKP+ VTY +L++ + ++ + L ++ + APD T+N V+ + +
Sbjct: 257 PSYG----CKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQ 312
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL---MHSKEK-P 323
G + VL++M + C PDIIT++ ++D K + D+ ++ K L M SK P
Sbjct: 313 KGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIP 372
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
TFN++I + + L +A V +M+ P TY CI+ G+ + E
Sbjct: 373 DQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVD--GFLCKSCKTEEAL 430
Query: 384 DELSKL---GKDMKVSTLNAMLEAYCMNGLPTEADL-----LFENSHNMGVTPDSSTYKL 435
D L+ + G +T ++ A+ GL E ++ +F MG++PD Y
Sbjct: 431 DLLNLMVSNGLCPDTTTYKSL--AF---GLSREDEMERAIGMFRRVQAMGLSPDKMLYNA 485
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+ K +L M NG +P++ ++ +E +
Sbjct: 486 ILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIA 526
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 135/300 (45%), Gaps = 26/300 (8%)
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQARNV 236
PD YN LI A L R + AL F M + R C P++VTY+ILL A +
Sbjct: 158 PDTFTYNPLIRA-LCVR---GCVLDALAVFDDM--LHRGCSPSVVTYSILLDATCKESGY 211
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
Q L E+ PDI TYN +++A G + E VL+ + S CKPD +T+ +
Sbjct: 212 KQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPV 271
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
+ S + +++ +++ + + P TFN++I + + G+A V +M+
Sbjct: 272 LKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGC 331
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS-----------TLNAMLEAY 405
TP ITY I+ D + + R + DE KL K++ T N ++ +
Sbjct: 332 TPDIITYSSIM------DGLCKERRV-DEAIKLLKELLAEMVSKNCIPDQVTFNTIITSL 384
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY-TKANMKELVQKLLKRMEQNGIVPN 464
C GL A + + G PD +TY + + K+ E LL M NG+ P+
Sbjct: 385 CQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPD 444
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 6/242 (2%)
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
LR Q +D L + S P + N ++ +G + + E V+ + +
Sbjct: 68 LRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALGPSA- 126
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
IIT+N +++ Y + D ++ S+ + P T+N +I A
Sbjct: 127 --TIITYNTMVNGYCRAGNIDAARRMIDSVPFA---PDTFTYNPLIRALCVRGCVLDALA 181
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
VF M +PS +TY ++ +A + DE+ G + + T N ++ A C
Sbjct: 182 VFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMC 241
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
G EA + + + G PD+ TY + K+ + E KLL +M N P++
Sbjct: 242 SQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEV 301
Query: 467 FF 468
F
Sbjct: 302 TF 303
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 6/191 (3%)
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P +I N+LI E+V ++L S T+ T+N+M+ Y +A G +
Sbjct: 94 PAVIPCNILIKKLCADGRVADAERVVEALGPSA---TIITYNTMVNGYCRA---GNIDAA 147
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
+ + ++ + P TY +I V A +FD++ G V T + +L+A C
Sbjct: 148 RRMIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCK 207
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
+A +L + + G PD TY +L A K+L + G P+
Sbjct: 208 ESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVT 267
Query: 468 FLEALETFSSS 478
+ L++ SS
Sbjct: 268 YTPVLKSLCSS 278
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 75/175 (42%), Gaps = 4/175 (2%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
I D ++ +I + +KG A+ + EM GC PD + YN ++ L K +
Sbjct: 371 IPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTE--- 427
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+AL M C P+ TY L ++ +++ +F+ + L+PD YN +
Sbjct: 428 EALDLLNLMVSNGLC-PDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAI 486
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+ K + M SN C PD T+ +L++ ++ +++ +L
Sbjct: 487 LLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELLGNL 541
>gi|356508736|ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 680
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 145/319 (45%), Gaps = 8/319 (2%)
Query: 149 SKLIAV---MGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALG 205
S L+AV +G G+T A LF E+R +G P YNAL+ ++ T +L A
Sbjct: 277 STLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRT----GSLKDAEF 332
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M+ KP+ TY++L+ A A + + KE+ S + P+ Y ++ ++ Y
Sbjct: 333 VVSEMEK-AGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANY 391
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
G ++ VL MKS+ +PD +N++ID++GK D F+ ++ P +
Sbjct: 392 RDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDI 451
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+N++I + K+ AE +F +M Y+P TY +I G + +
Sbjct: 452 VTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSK 511
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ G T +++ Y +G ++A E + G P S+ Y L AY + +
Sbjct: 512 MQSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGL 571
Query: 446 KELVQKLLKRMEQNGIVPN 464
EL + M G+ P+
Sbjct: 572 SELAVNAFRLMTTEGLTPS 590
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 169/400 (42%), Gaps = 44/400 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L LG+S+K E F Q+Q + Y+ LI + G A+ L S+MR
Sbjct: 144 ILINALGRSEK---LYEAFLLSQRQ---VLTPLTYNALIGACARNGDVEKALNLMSKMRR 197
Query: 174 SGCRPDPSVYNALIT-----------------AHLHT----------RDKAKALAKALGY 206
G +PD Y+++I A + T D +KA
Sbjct: 198 DGYQPDFVNYSSIIQYLTRSNKIDSPILQKLYAEIETDKIEIDGHLMNDIIVGFSKAGDP 257
Query: 207 FQKMKGMERCK-----PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+ M+ + + P T ++ A + + ALF+E+ E+ L P YN +
Sbjct: 258 TRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNAL 317
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ Y + G +K+ E V+S M+ KPD T++LLID Y ++ V K + S
Sbjct: 318 LKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNV 377
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT---PSFITYECIITMYGYCDNVSR 378
+P F+ ++ NY R +G+ + FQ + MK + P Y +I +G + +
Sbjct: 378 QPNSYVFSRILANY---RDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDH 434
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A F+ + G + T N +++ +C +G A+ LF G +P +TY ++
Sbjct: 435 AMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMIN 494
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ + E V L +M+ G+ PN + ++ + S
Sbjct: 495 SMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKS 534
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 145/325 (44%), Gaps = 9/325 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS LI V G+ A + EM S +P+ V++ ++ + RDK +
Sbjct: 345 DEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANY---RDKGEWQKS- 400
Query: 204 LGYFQKMKGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
FQ +K M+ +P+ YN+++ + +D A F+ + + PDI T+N +
Sbjct: 401 ---FQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTL 457
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+D + K+G E + S M+ P I T+N++I+S G++Q ++++ +
Sbjct: 458 IDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGL 517
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
+P T+ +++ YGK+ A + + + + P+ Y +I Y A
Sbjct: 518 QPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVN 577
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
F ++ G + LN+++ A+ + EA + + + PD TY L KA
Sbjct: 578 AFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALI 637
Query: 442 KANMKELVQKLLKRMEQNGIVPNKR 466
+ + V + + M +G P+++
Sbjct: 638 RVEKFQKVPAVYEEMVASGCTPDRK 662
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 112/255 (43%), Gaps = 7/255 (2%)
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y+IL+ A ++ + + F +L P TYN ++ A +NG +++ +++S+M+
Sbjct: 142 YSILINALGRSEKLYEA---FLLSQRQVLTP--LTYNALIGACARNGDVEKALNLMSKMR 196
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDK--MEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
+ +PD + ++ +I + D +++++ + K + N +I+ + KA
Sbjct: 197 RDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLYAEIETDKIEIDGHLMNDIIVGFSKAGD 256
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
+A + P T +I G A +F+E+ + G + + NA
Sbjct: 257 PTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNA 316
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+L+ Y G +A+ + GV PD TY LL Y A E + +LK ME +
Sbjct: 317 LLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASN 376
Query: 461 IVPNKRFFLEALETF 475
+ PN F L +
Sbjct: 377 VQPNSYVFSRILANY 391
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 136/336 (40%), Gaps = 12/336 (3%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
V W+QK + +YS LI +G+ + A L + P YNALI A
Sbjct: 125 VVSWLQKHNLCFSYELLYSILINALGRSEKLYEAFLLSQRQVLT-----PLTYNALIGAC 179
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ--VNALFKELHE 248
D + KAL KM+ + +P+ V Y+ +++ ++ +D + L+ E+
Sbjct: 180 ARNGD----VEKALNLMSKMR-RDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLYAEIET 234
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
+ D + N ++ + K G L+ +SN P T +I + G +
Sbjct: 235 DKIEIDGHLMNDIIVGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHE 294
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
E +F+ + + +P +N+++ Y + AE+V +M P TY +I
Sbjct: 295 AEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLID 354
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
+Y + AR + E+ + +L Y G ++ + ++ + GV P
Sbjct: 355 VYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQP 414
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
D Y ++ + K N + +RM GI P+
Sbjct: 415 DRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPD 450
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 100/205 (48%), Gaps = 10/205 (4%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
KS + E+F MQ QR Y Y+ +I MG++ + S+M++ G +P+
Sbjct: 463 KSGRHDMAEELFSEMQ-QRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNS 521
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ-- 238
Y L+ + K+ + A+ + +K KP YN L+ A AQ R + +
Sbjct: 522 ITYTTLVDVY----GKSGRFSDAIECLEVLKST-GFKPTSTMYNALINAYAQ-RGLSELA 575
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
VNA F+ + L P + N +++A+G++ E +VL MK N +PD++T+ L+
Sbjct: 576 VNA-FRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMK 634
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKP 323
+ + + F K+ V++ ++ S P
Sbjct: 635 ALIRVEKFQKVPAVYEEMVASGCTP 659
>gi|410110123|gb|AFV61141.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
macrophylla]
Length = 381
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 133/276 (48%), Gaps = 5/276 (1%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
D +YS LI + K A+ +FS ++ SG PD YNA+I KAK +
Sbjct: 2 GDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVF----GKAKLFRE 57
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A +MK PN +Y+ LL + + + ++F E+ E D+ T N ++
Sbjct: 58 ARSLISEMK-TAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMI 116
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D YG+ GM KE + + M+ +P+++++N L+ YG + F + +F+ + +
Sbjct: 117 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 176
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
+ T+NSMI+ YGK KA + Q+M + P+ ITY II+++G + RA +
Sbjct: 177 QNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAML 236
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
F +L G ++ M+ AY GL A L
Sbjct: 237 FQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLL 272
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 151/343 (44%), Gaps = 15/343 (4%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L SEM+ +G P+ + Y+ L+T ++
Sbjct: 31 KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVEN--- 87
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
K +AL F +M+ + +C ++ T NI++ Q + + LF + + + P++
Sbjct: 88 -KKFLEALSVFSEMREI-KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVV 145
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+YN ++ YG + E + M+ + +++T+N +I YGK +K + + +
Sbjct: 146 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEM 205
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P T++++I +GK +A +FQK+ + I ++ +I Y V
Sbjct: 206 QSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLV 265
Query: 377 SRAREIFDELSK---LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ A+ + EL + + +D + L G EA +F + + G D + +
Sbjct: 266 AHAKRLLHELKRPDNIPRDTAIHILAGA-------GRIEEATYVFRQAIDAGEVKDITVF 318
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+ + +K V ++ +M G P+ L +
Sbjct: 319 ERMIHLLSKXKKYSNVVEVFNKMRGLGYFPDSDVIAXVLNAYG 361
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 130/263 (49%), Gaps = 1/263 (0%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+KA+ F ++K P++V YN ++ +A+ + +L E+ + + P+ +Y+
Sbjct: 21 SKAISIFSRLK-RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYST 79
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ Y +N E SV S M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 80 LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 139
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P + ++N+++ YG A L G+A ++F+ M + +TY +I +YG +A
Sbjct: 140 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKAN 199
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ E+ G + T + ++ + G A +LF+ + GV D ++ + AY
Sbjct: 200 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY 259
Query: 441 TKANMKELVQKLLKRMEQNGIVP 463
+A + ++LL +++ +P
Sbjct: 260 ERAGLVAHAKRLLHELKRPDNIP 282
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 119/250 (47%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
++V Y+ L+ + + + ++F L S PD+ YN +++ +GK + +E S++
Sbjct: 3 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 62
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
S MK+ P+ +++ L+ Y + + F + VF + K L T N MI YG+
Sbjct: 63 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 122
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
+ +A+ +F M M P+ ++Y ++ +YG + A +F + + + V T
Sbjct: 123 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 182
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N+M+ Y +A+ L + + G+ P+S TY + + K + L +++
Sbjct: 183 NSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 242
Query: 459 NGIVPNKRFF 468
+G+ ++ F
Sbjct: 243 SGVEIDQILF 252
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 129/301 (42%), Gaps = 37/301 (12%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
++ K+L+ L VF M++ + + D + +I V G+ G + A LF MR G P+
Sbjct: 86 ENKKFLEALSVFSEMREIKCLL-DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 144
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
YN L L A+ +A+ F+ M+ + + N+VTYN ++ + ++ N
Sbjct: 145 VSYNTL----LRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVTYNSMIMIYGKTLEHEKAN 199
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
L +E+ + P+ TY+ ++ +GK G + + +++S+ + D I F +I +Y
Sbjct: 200 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY 259
Query: 301 --------GKRQAFD--------------------KMEQ---VFKSLMHSKEKPTLPTFN 329
KR + ++E+ VF+ + + E + F
Sbjct: 260 ERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFE 319
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
MI K + VF KM + Y P ++ YG +A +++ E+ ++
Sbjct: 320 RMIHLLSKXKKYSNVVEVFNKMRGLGYFPDSDVIAXVLNAYGKLQEFDKANDVYMEMQEV 379
Query: 390 G 390
G
Sbjct: 380 G 380
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 141/321 (43%), Gaps = 6/321 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT + L+ + G R A WL M GCR + Y LI TR +AL
Sbjct: 217 DTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLL 276
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L Q + C PN+ TY +L+R + + L E+ + P ++TYN ++D
Sbjct: 277 LMMLQ-----DGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMID 331
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
Y K+G +K+ + + M+ N C PD T+N LI + D+ E++ + P
Sbjct: 332 GYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCGGKP-DEAEELLNGAIARGFSP 390
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T+ TF ++I Y KA A V M + K Y +I++ + A++
Sbjct: 391 TVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTL 450
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+E+ G V ++++AYC G A +F+ + + G P++ TY L +
Sbjct: 451 NEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQD 510
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
L+ +M+++GI P
Sbjct: 511 QKLHKAMALITKMQEDGITPG 531
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 133/317 (41%), Gaps = 24/317 (7%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ K G T A L +M N GC+ D Y+ L+ A K K L +AL
Sbjct: 602 YTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALC----KQKKLNEALSIL 657
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M + K NIV Y I++ + D ++F E+ S P TY + +Y K
Sbjct: 658 DQMT-LRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCK 716
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G I+E ++ M+ N PD++T+N+ I+ G D K ++ + +P T
Sbjct: 717 IGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWT 776
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ ++ ++ K L A YV T + + T++ ++ + +
Sbjct: 777 YWLLLKHFLKMSL-ANAHYVD--------TSGMWNWIKLDTVW----------QLLERMV 817
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
K G + T ++++ +C EA +L ++ ++P+ Y +L K + E
Sbjct: 818 KHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFE 877
Query: 448 LVQKLLKRMEQNGIVPN 464
+ M + G P+
Sbjct: 878 KAASFVTNMIECGFQPH 894
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 140/332 (42%), Gaps = 27/332 (8%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR-DK 196
+R + Y+ +I K G+ + A+ + + M +GC PD YN+LI + D+
Sbjct: 316 RRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCGGKPDE 375
Query: 197 AKAL---AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP 253
A+ L A A G+ P ++T+ ++ +A +D + + S
Sbjct: 376 AEELLNGAIARGF----------SPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKL 425
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
D+ Y ++ K +KE + L+ + +N P+++ + +ID+Y K +VF
Sbjct: 426 DLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVF 485
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
K H +P T++S+I + + KA + KM TP ITY +I G C
Sbjct: 486 KLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQ--GQC 543
Query: 374 -----DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
DN R +F+ + + G N + +A C +G EA + GV
Sbjct: 544 KKHEFDNAFR---LFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEA---YSFLVKKGVVL 597
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
TY L ++KA E L+++M G
Sbjct: 598 TKVTYTSLVDGFSKAGNTEFAAALIEKMVNEG 629
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 138/350 (39%), Gaps = 66/350 (18%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI KK + A LF M +G PD YN L A + +A + F
Sbjct: 535 YTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYS-----F 589
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
KG+ K VTY L+ ++A N + AL +++ D +TY+ ++ A K
Sbjct: 590 LVKKGVVLTK---VTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCK 646
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ E S+L +M K +I+ + ++I K D + +F ++ S KP+ T
Sbjct: 647 QKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAIT 706
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ I +Y K +A ++ +M P +TY I G+ +
Sbjct: 707 YTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYM----------- 755
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK- 446
D STL M++A C P+ TY LL K + K ++
Sbjct: 756 ----DCAFSTLKRMIDASC--------------------EPNYWTYWLLLKHFLKMSLAN 791
Query: 447 ---------------ELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
+ V +LL+RM ++G+ P T+SS +AG
Sbjct: 792 AHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTA-------VTYSSIIAG 834
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 5/228 (2%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+ VTYN ++ A + ++ + F+ L ES + D YT N ++ Y + G +++ +
Sbjct: 181 PDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWL 240
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L M C+ + ++ +LI + + + + ++ P L T+ +I K
Sbjct: 241 LMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCK 300
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKV 395
A + +M PS TY +I GYC + + A I + G +
Sbjct: 301 EGRIHDARVLLDEMPRRGVVPSVWTYNAMID--GYCKSGRLKDALGIKTLMEGNGCNPDD 358
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
T N+++ C G P EA+ L + G +P T+ + Y KA
Sbjct: 359 WTYNSLIHGLC-GGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKA 405
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 49/118 (41%)
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
++ ++ P +TY +I Y +++ A F L + G +M T NA+L YC
Sbjct: 170 LYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYC 229
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G +A L MG + +Y +L + + LL M Q+G PN
Sbjct: 230 RTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPN 287
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 159/359 (44%), Gaps = 32/359 (8%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L++ R M++ I + IYS +I + K G+ A LF+EM+ G PD YN++I
Sbjct: 239 LDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV 298
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELH 247
+ + A Q+M +ER P++VTYN L+ A + + L+ E+
Sbjct: 299 GFC----SSGRWSDAEQLLQEM--LERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY-GKRQAF 306
+ P+ TY+ ++D + K + E + M + C P++ITFN LID Y G ++
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412
Query: 307 DKMEQVFKSLMHSKEKPTL----PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
D ME L+H + L T+N++I + A + Q+M + P +T
Sbjct: 413 DGME-----LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVT 467
Query: 363 YECIITMYGYCDN--VSRAREIFDELSKLGKDM-----------KVSTLNAMLEAYCMNG 409
C + G CDN + A E+F + K KD+ V T N ++ G
Sbjct: 468 --CDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEG 525
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
EA+ L+E + G+ PD+ TY + K + + ++ M PN F
Sbjct: 526 KFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTF 584
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 150/329 (45%), Gaps = 17/329 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ L+ + ++G+ A+ L M G +P Y ++ D AL
Sbjct: 187 FTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALD----LL 242
Query: 208 QKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+KM+ + PN+V Y+ ++ + C R+ D N LF E+ E + PD++TYN ++ +
Sbjct: 243 RKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQN-LFTEMQEKGIFPDLFTYNSMIVGFC 301
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+G + E +L M + PD++T+N LI+++ K F + E+++ ++ P
Sbjct: 302 SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T++SMI + K AE++F M +P+ IT+ +I Y + E+ E+
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN-- 444
++ G +T N ++ + + G A L + + G+ PD T L
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481
Query: 445 -----MKELVQKLLKRMEQ----NGIVPN 464
M +++QK K ++ NG+ P+
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPD 510
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 154/359 (42%), Gaps = 27/359 (7%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
S +W ++ + M +R D Y+ LI K+G+ A L+ EM G P+
Sbjct: 303 SGRWSDAEQLLQEML-ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
Y+++I +++ A A+ + Y KG C PN++T+N L+ A+ +D
Sbjct: 362 TYSSMIDGFCK-QNRLDA-AEHMFYLMATKG---CSPNLITFNTLIDGYCGAKRIDDGME 416
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
L E+ E+ L D TYN ++ + G + +L M S+ PDI+T + L+D
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476
Query: 302 KRQAFDKMEQVFKSLMHSKE-----------KPTLPTFNSMI---INYGKARLQGKAEYV 347
++FK + SK+ +P + T+N +I IN GK +AE +
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL---EAEEL 533
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+++M P ITY +I G C + A ++FD + V T ++ Y
Sbjct: 534 YEEMPHRGIVPDTITYSSMID--GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 591
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
C G + LF G+ ++ TY L + K + + M +G+ P+
Sbjct: 592 CKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 143/314 (45%), Gaps = 8/314 (2%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME-RCKPNIVT 222
A+ LFS+M S RP PSV + + R + L +L +QKM+ + RC +I +
Sbjct: 63 AIDLFSDMLRS--RPLPSVVDFCKLMGVVVRMERPDLVISL--YQKMERKQIRC--DIYS 116
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
+ IL++ + + F ++ + L PD+ T+N ++ + E ++ +M
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
C+P+++TF L++ + + + +M +PT T+ +++ K
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTV 236
Query: 343 KAEYVFQKMTAMKYT-PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
A + +KM + + P+ + Y II S A+ +F E+ + G + T N+M
Sbjct: 237 SALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ +C +G ++A+ L + ++PD TY L A+ K ++L M GI
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356
Query: 462 VPNKRFFLEALETF 475
+PN + ++ F
Sbjct: 357 IPNTITYSSMIDGF 370
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 113/280 (40%), Gaps = 22/280 (7%)
Query: 140 WYIADTGIYSKLIA----VMGKKGQTRL--AMWLFSEMRNSGCRPDPSVYNALITAHLHT 193
+ +A G LI + G G R+ M L EM +G D + YN LI
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443
Query: 194 RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES---- 249
D L AL Q+M C P+IVT + LL + +FK + +S
Sbjct: 444 GD----LNAALDLLQEMISSGLC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDL 498
Query: 250 -------ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
+ PD+ TYN ++ G E E + M PD IT++ +ID K
Sbjct: 499 DASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCK 558
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ D+ Q+F S+ P + TF ++I Y KA +F +M + IT
Sbjct: 559 QSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAIT 618
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
Y +I + N++ A +IF E+ G T+ ML
Sbjct: 619 YITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 88/204 (43%), Gaps = 16/204 (7%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYI----------ADTGIYSKLIAVMGKKGQT 161
C L + L + K LE+F+ MQK + + D Y+ LI+ + +G+
Sbjct: 468 CDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKF 527
Query: 162 RLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV 221
A L+ EM + G PD Y+++I K L +A F M G + PN+V
Sbjct: 528 LEAEELYEEMPHRGIVPDTITYSSMIDGLC----KQSRLDEATQMFDSM-GSKSFSPNVV 582
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
T+ L+ +A VD LF E+ + + TY ++ + K G I + M
Sbjct: 583 TFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEM 642
Query: 282 KSNQCKPDIITF-NLLIDSYGKRQ 304
S+ PD IT N+L + K +
Sbjct: 643 ISSGVYPDTITIRNMLTGLWSKEE 666
>gi|42570531|ref|NP_850859.2| SNF1-like protein kinase [Arabidopsis thaliana]
gi|75160582|sp|Q8S9D1.1|PP395_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g21222; AltName: Full=SNF1-like protein kinase AtC401
gi|19071860|dbj|BAB85674.1| SNF1-like protein kinase [Arabidopsis thaliana]
gi|332005563|gb|AED92946.1| SNF1-like protein kinase [Arabidopsis thaliana]
Length = 831
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 163/333 (48%), Gaps = 7/333 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + ++ + L S++ +G +PD ++NA+I A ++ L +A+ F
Sbjct: 357 YTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINAS----SESGNLDQAMKIF 412
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE-LHESILAPDIYTYNGVMDAYG 266
+KMK CKP T+N L++ + +++ + L L + +L P+ T N ++ A+
Sbjct: 413 EKMK-ESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWC 471
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ-VFKSLMHSKEKPTL 325
I+E +++ +M+S KPD++TFN L +Y + + E + ++H+K KP +
Sbjct: 472 NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNV 531
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T +++ Y + +A F +M + P+ + +I + +++ E+ D
Sbjct: 532 RTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDL 591
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ + G V T + ++ A+ G + ++ + G+ PD + +L K Y +A
Sbjct: 592 MEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGE 651
Query: 446 KELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
E +++L +M + G+ PN + + + + S+
Sbjct: 652 PEKAEQILNQMRKFGVRPNVVIYTQIISGWCSA 684
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 143/326 (43%), Gaps = 12/326 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT +++ +I + G AM +F +M+ SGC+P S +N LI + K L ++
Sbjct: 388 DTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGY----GKIGKLEES 443
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
M E +PN T NIL++A R +++ + ++ + PD+ T+N +
Sbjct: 444 SRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAK 503
Query: 264 AYGKNGMIKEMES-VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE- 321
AY + G E ++ RM N+ KP++ T +++ Y + KME+ + KE
Sbjct: 504 AYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEE---GKMEEALRFFYRMKEL 560
Query: 322 --KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
P L FNS+I + V M P +T+ ++ + ++ R
Sbjct: 561 GVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRC 620
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
EI+ ++ + G D + + + + Y G P +A+ + GV P+ Y +
Sbjct: 621 EEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISG 680
Query: 440 YTKAN-MKELVQKLLKRMEQNGIVPN 464
+ A MK+ +Q K G+ PN
Sbjct: 681 WCSAGEMKKAMQVYKKMCGIVGLSPN 706
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 120/266 (45%), Gaps = 2/266 (0%)
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
E KP+++TY L+ A + ++ + +L ++ ++ L PD +N +++A ++G + +
Sbjct: 348 EGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQ 407
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-KPTLPTFNSMI 332
+ +MK + CKP TFN LI YGK ++ ++ ++ + +P T N ++
Sbjct: 408 AMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILV 467
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE-IFDELSKLGK 391
+ R +A + KM + P +T+ + Y + A + I +
Sbjct: 468 QAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKV 527
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
V T ++ YC G EA F +GV P+ + L K + N + V +
Sbjct: 528 KPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGE 587
Query: 452 LLKRMEQNGIVPNKRFFLEALETFSS 477
++ ME+ G+ P+ F + +SS
Sbjct: 588 VVDLMEEFGVKPDVVTFSTLMNAWSS 613
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/329 (18%), Positives = 142/329 (43%), Gaps = 40/329 (12%)
Query: 170 EMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA 229
+M++ G +PD +N L A + R + A+ + + + + KPN+ T ++
Sbjct: 485 KMQSYGVKPDVVTFNTL--AKAYARIGSTCTAEDMIIPRMLH--NKVKPNVRTCGTIVNG 540
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
+ +++ F + E + P+++ +N ++ + + + V+ M+ KPD
Sbjct: 541 YCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPD 600
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
++TF+ L++++ + E+++ ++ P + F+ + Y +A KAE +
Sbjct: 601 VVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILN 660
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
+M P+ + Y II+ + + +A +++ ++ +
Sbjct: 661 QMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGI-------------------- 700
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFL 469
+G++P+ +TY+ L + +A ++LLK ME +VP ++ +
Sbjct: 701 --------------VGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRK-TM 745
Query: 470 EALETFSSSLAGSQSGSAKTDLTRSLSTA 498
+ + S+ S S A T L S ST+
Sbjct: 746 QLIADGWKSIGVSNSNDANT-LGSSFSTS 773
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 6/242 (2%)
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ +++F L E P + TY ++ A + + S++S+++ N KPD I FN +I
Sbjct: 337 EAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAII 396
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK-ARLQGKAEYVFQKMTAMKY 356
++ + D+ ++F+ + S KPT TFN++I YGK +L+ + + +
Sbjct: 397 NASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEML 456
Query: 357 TPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG-LPTE 413
P+ T C I + +C+ + A I ++ G V T N + +AY G T
Sbjct: 457 QPNDRT--CNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTA 514
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
D++ + V P+ T + Y + E + RM++ G+ PN F ++
Sbjct: 515 EDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIK 574
Query: 474 TF 475
F
Sbjct: 575 GF 576
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 96/217 (44%), Gaps = 6/217 (2%)
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
D+ + +M+ + G +E S+ + + KP +IT+ L+ + +++ F + +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
+ + KP FN++I ++ +A +F+KM P+ T+ +I YG
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 374 DNVSRAREIFDELSKLGKDM---KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
+ + + D + L +M T N +++A+C EA + + GV PD
Sbjct: 438 GKLEESSRLLDMM--LRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDV 495
Query: 431 STYKLLYKAYTKANMKELVQK-LLKRMEQNGIVPNKR 466
T+ L KAY + + ++ RM N + PN R
Sbjct: 496 VTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVR 532
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 4/127 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +S L + G+ A + ++MR G RP+ +Y +I+ A + KA
Sbjct: 635 DIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWC----SAGEMKKA 690
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ ++KM G+ PN+ TY L+ +A+ + L K++ + P T + D
Sbjct: 691 MQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIAD 750
Query: 264 AYGKNGM 270
+ G+
Sbjct: 751 GWKSIGV 757
>gi|410110107|gb|AFV61133.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
brasiliensis]
Length = 382
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 133/276 (48%), Gaps = 5/276 (1%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
D +YS LI + K A+ +FS ++ SG PD YNA+I KAK +
Sbjct: 3 GDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVF----GKAKLFRE 58
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A +MK PN +Y+ LL + + + ++F E+ E D+ T N ++
Sbjct: 59 ARSLISEMK-TAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMI 117
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D YG+ GM KE + + M+ +P+++++N L+ YG + F + +F+ + +
Sbjct: 118 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 177
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
+ T+NSMI+ YGK KA + Q+M + P+ ITY II+++G + RA +
Sbjct: 178 QNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAML 237
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
F +L G ++ M+ AY GL A L
Sbjct: 238 FQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLL 273
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 130/263 (49%), Gaps = 1/263 (0%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+KA+ F ++K P++V YN ++ +A+ + +L E+ + + P+ +Y+
Sbjct: 22 SKAISIFSRLK-RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYST 80
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ Y +N E SV S M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 81 LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 140
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P + ++N+++ YG A L G+A ++F+ M + +TY +I +YG +A
Sbjct: 141 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKAN 200
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ E+ G + T + ++ + G A +LF+ + GV D ++ + AY
Sbjct: 201 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY 260
Query: 441 TKANMKELVQKLLKRMEQNGIVP 463
+A + ++LL +++ +P
Sbjct: 261 ERAGLVAHAKRLLHELKRPDNIP 283
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 151/343 (44%), Gaps = 15/343 (4%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L SEM+ +G P+ + Y+ L+T ++
Sbjct: 32 KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVEN--- 88
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
K +AL F +M+ + +C ++ T NI++ Q + + LF + + + P++
Sbjct: 89 -KKFLEALSVFSEMREI-KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVV 146
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+YN ++ YG + E + M+ + +++T+N +I YGK +K + + +
Sbjct: 147 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEM 206
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P T++++I +GK +A +FQK+ + I ++ +I Y V
Sbjct: 207 QSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLV 266
Query: 377 SRAREIFDELSK---LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ A+ + EL + + +D + L G EA +F + + G D + +
Sbjct: 267 AHAKRLLHELKRPDNIPRDTAIHILAGA-------GRIEEATYVFRQAIDAGEVKDITVF 319
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+ + +K V ++ +M G P+ L +
Sbjct: 320 ERMIHLLSKYKKYXNVVEVFDKMRGLGYFPDSNVIAVVLNAYG 362
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 119/250 (47%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
++V Y+ L+ + + + ++F L S PD+ YN +++ +GK + +E S++
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
S MK+ P+ +++ L+ Y + + F + VF + K L T N MI YG+
Sbjct: 64 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
+ +A+ +F M M P+ ++Y ++ +YG + A +F + + + V T
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 183
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N+M+ Y +A+ L + + G+ P+S TY + + K + L +++
Sbjct: 184 NSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 243
Query: 459 NGIVPNKRFF 468
+G+ ++ F
Sbjct: 244 SGVEIDQILF 253
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 129/301 (42%), Gaps = 37/301 (12%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
++ K+L+ L VF M++ + + D + +I V G+ G + A LF MR G P+
Sbjct: 87 ENKKFLEALSVFSEMREIKCLL-DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 145
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
YN L L A+ +A+ F+ M+ + + N+VTYN ++ + ++ N
Sbjct: 146 VSYNTL----LRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVTYNSMIMIYGKTLEHEKAN 200
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
L +E+ + P+ TY+ ++ +GK G + + +++S+ + D I F +I +Y
Sbjct: 201 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY 260
Query: 301 --------GKRQAFD--------------------KMEQ---VFKSLMHSKEKPTLPTFN 329
KR + ++E+ VF+ + + E + F
Sbjct: 261 ERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFE 320
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
MI K + VF KM + Y P ++ YG +A +++ E+ ++
Sbjct: 321 RMIHLLSKYKKYXNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQEV 380
Query: 390 G 390
G
Sbjct: 381 G 381
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 155/327 (47%), Gaps = 15/327 (4%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT---AHLHTRDKAKA 199
AD I++ +I + K A+ LF EM G RP+ Y++LI+ ++ D ++
Sbjct: 258 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 317
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L+ + ++ PN+VT+N L+ A + + L+ ++ + + PDI+TYN
Sbjct: 318 LSDMIE--------KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN 369
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
+++ + + + + + + M S C PD++T+N LI + K + + ++F+ + H
Sbjct: 370 SLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR 429
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VS 377
T+ ++I A+ VF++M + P +TY I + G C+N +
Sbjct: 430 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS--ILLDGLCNNGKLE 487
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
+A E+FD + K + + M+E C G + LF + GV P+ TY +
Sbjct: 488 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 547
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPN 464
+ + LLK+M+++G +PN
Sbjct: 548 SGLCSKRLLQEAYALLKKMKEDGPLPN 574
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 146/323 (45%), Gaps = 9/323 (2%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
Y DT ++ LI + + A+ L M GC+P+ Y ++ D AL
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
KM+ + + ++V +N ++ + + R+VD LFKE+ + P++ TY+
Sbjct: 246 ----NLLNKMEA-AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ G + +LS M + P+++TFN LID++ K F + E+++ ++
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSR 378
P + T+NS++ + KA+ +F+ M + P +TY +I G+C + V
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIK--GFCKSKRVED 418
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
E+F E+S G T +++ +G A +F+ + GV PD TY +L
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478
Query: 439 AYTKANMKELVQKLLKRMEQNGI 461
E ++ M+++ I
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSEI 501
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 148/307 (48%), Gaps = 17/307 (5%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVT 222
A+ L +M G RPD + LI L +KA ++A+ +M ++R C+PN+VT
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHG-LFLHNKA---SEAVALVDRM--VQRGCQPNLVT 227
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y +++ + + D L ++ + + D+ +N ++D+ K + + ++ M+
Sbjct: 228 YGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 287
Query: 283 SNQCKPDIITFNLLID---SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
+ +P+++T++ LI SYG+ + Q+ ++ K P L TFN++I + K
Sbjct: 288 TKGIRPNVVTYSSLISCLCSYGR---WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 344
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM--KVST 397
+AE ++ M P TY ++ + D + +A+++F+ + + KD V T
Sbjct: 345 KFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFM--VSKDCFPDVVT 402
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
N +++ +C + + LF + G+ D+ TY L + + QK+ K+M
Sbjct: 403 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462
Query: 458 QNGIVPN 464
+G+ P+
Sbjct: 463 SDGVPPD 469
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 44/311 (14%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH-LHTR-DKAKALAKALG 205
++ LI K+G+ A L+ +M PD YN+L+ +H R DKAK +
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM----- 387
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
F+ M + C P++VTYN L++ +++ V+ LF+E+ L D TY ++
Sbjct: 388 -FEFMVSKD-CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+G + V +M S+ PDI+T+++L+D +K +VF + S+ K +
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
+ +MI KA GK V ++F
Sbjct: 506 YIYTTMIEGMCKA---GK--------------------------------VDDGWDLFCS 530
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
LS G V T N M+ C L EA L + G P+S TY L +A+ +
Sbjct: 531 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 590
Query: 446 KELVQKLLKRM 456
K +L++ M
Sbjct: 591 KAASAELIREM 601
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 145/355 (40%), Gaps = 46/355 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++KL++ + K + + + L +M+ YN LI + ALA LG
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALA-LLGKM 146
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K+ G E P+IVT + LL + + AL ++ E PD T+ ++
Sbjct: 147 MKL-GYE---PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 268 NGMIKEMESVLSRMKSNQCKPDIIT----------------------------------- 292
+ E +++ RM C+P+++T
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI---INYGKARLQGKAEYVFQ 349
FN +IDS K + D +FK + +P + T++S+I +YG+ A +
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR---WSDASQLLS 319
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
M K P+ +T+ +I + A +++D++ K D + T N+++ +CM+
Sbjct: 320 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 379
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+A +FE + PD TY L K + K+ E +L + M G+V +
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 434
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 116/278 (41%), Gaps = 5/278 (1%)
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L A+G F M R P+IV +N LL A A+ + D V +L +++ + +YTYN
Sbjct: 66 LDDAIGLFGGMV-KSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
+++ + + I ++L +M +P I+T + L++ Y + + ++
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVS 377
+P TF ++I +A + +M P+ +TY ++ G C +
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN--GLCKRGDTD 242
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
A + +++ + V N ++++ C +A LF+ G+ P+ TY L
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+LL M + I PN F ++ F
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 340
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 6/171 (3%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E+FR M R + DT Y+ LI + G A +F +M + G PD Y+ L+
Sbjct: 421 ELFREMS-HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ KAL + Y QK K +I Y ++ +A VD LF L
Sbjct: 480 LCNNGKLEKAL-EVFDYMQK----SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 534
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
+ P++ TYN ++ +++E ++L +MK + P+ T+N LI ++
Sbjct: 535 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAH 585
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 98/245 (40%), Gaps = 6/245 (2%)
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS--- 279
Y +LR +D LF + +S P I +N ++ A K +K+ + V+S
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAK---MKKFDVVISLGE 109
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
+M+ + + T+N+LI+ + +R + +M +P++ T +S++ Y +
Sbjct: 110 KMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 169
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLN 399
A + +M M Y P IT+ +I + S A + D + + G + T
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
++ C G A L + D + + + K + L K ME
Sbjct: 230 VVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 289
Query: 460 GIVPN 464
GI PN
Sbjct: 290 GIRPN 294
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L + K + LEVF +MQK + D IY+ +I M K G+ LF +
Sbjct: 475 ILLDGLCNNGKLEKALEVFDYMQKSEIKL-DIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 533
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA 229
G +P+ YN +I+ R L +A +KMK + PN TYN L+RA
Sbjct: 534 KGVKPNVVTYNTMISGLCSKR----LLQEAYALLKKMK-EDGPLPNSGTYNTLIRA 584
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 166/386 (43%), Gaps = 9/386 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L + K + + +F M Q A+ Y+ LI + G + A FS+M
Sbjct: 120 LINGLCRVGKLREAVNLFDEMVSQGIK-ANVITYNSLIHASCRFGLWKEATRTFSQMVGE 178
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G PD + LI HL + K + +A F+ M PNIVTYN LL
Sbjct: 179 GILPDVVTFTTLID-HLSKKGKVQ---EAYKIFELMIKQGEA-PNIVTYNSLLNGLCLHH 233
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+D LF+ + E + D+ +YN +++ Y +G +E ++ +M+ + P I T+
Sbjct: 234 QMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYT 293
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+L+ + + +++F ++ + P+L T+ ++ K +A VF+ + ++
Sbjct: 294 ILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSI 353
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
KY PS Y +I A EIFDE+ +G + T N M+ C G EA
Sbjct: 354 KYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEA 413
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
+ LF G D ++ + + + + N + + LKRM + PN L +
Sbjct: 414 ERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNL 473
Query: 475 FSSSLAGSQSGSAKTDLTRSLSTAKS 500
++ A +QS + L K+
Sbjct: 474 YA---ADAQSSELPNNFLHELVQKKT 496
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 143/317 (45%), Gaps = 5/317 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y +I + K G + +F EM N G P+ VY++LI + L +A+ F
Sbjct: 82 YGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLC----RVGKLREAVNLF 137
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M + K N++TYN L+ A + + F ++ + PD+ T+ ++D K
Sbjct: 138 DEMVS-QGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSK 196
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G ++E + M P+I+T+N L++ D ++F+ ++ K + +
Sbjct: 197 KGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVIS 256
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N++I Y + +A +F+KM + TPS TY ++ + A+E+F+ +
Sbjct: 257 YNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQ 316
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G+ + T +L+ C NG EA +F + ++ P Y +L +A E
Sbjct: 317 ICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWE 376
Query: 448 LVQKLLKRMEQNGIVPN 464
++ + G+VPN
Sbjct: 377 SAMEIFDEIPTVGLVPN 393
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 118/283 (41%), Gaps = 35/283 (12%)
Query: 217 KPNIVTYNILLRA-CAQARNVDQ----------------------VNALFK--------E 245
+PN+VT + L++ C + + +D +NAL K E
Sbjct: 6 QPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVE 65
Query: 246 LHESILAP----DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
LH +L+ + +TY V+D+ K+G+ + + M + P++I ++ LI+
Sbjct: 66 LHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLC 125
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
+ + +F ++ K + T+NS+I + L +A F +M P +
Sbjct: 126 RVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVV 185
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
T+ +I V A +IF+ + K G+ + T N++L C++ A LFE
Sbjct: 186 TFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVM 245
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G+ D +Y L Y + E L ++M+ + P+
Sbjct: 246 VERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPS 288
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 142/324 (43%), Gaps = 15/324 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS LI + G F + +G R D N L+ H + +A+ L
Sbjct: 93 YSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLL--- 149
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL---HESILAPDIYTYNGVMDA 264
Q+M + C P+ V+Y ILL+ + ++ L + H P++ +Y+ V++
Sbjct: 150 QRMPELG-CMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVING 208
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ G + + ++ M PD++T+ +ID K Q FD+ E VF+ ++ + KP
Sbjct: 209 FFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPN 268
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
T+N +I Y + + ++M+A P TY ++ AR FD
Sbjct: 269 NYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFD 328
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEA----DLLFENSHNMGVTPDSSTYKLLYKAY 440
+ + G KVST ++ Y G +E DL+ EN G++PD + + + AY
Sbjct: 329 SMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVEN----GLSPDHHIFNIFFSAY 384
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
K M + + +M Q+G+ PN
Sbjct: 385 AKCGMIDKAMDIFNKMRQHGLSPN 408
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 143/319 (44%), Gaps = 9/319 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI G+ + + + EM G +PD Y +L+ +L + + +A +F
Sbjct: 272 YNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLN-YLCKNGRCR---EARFFF 327
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
M KG+ KP + TY IL+ A + ++++ + E+ L+PD + +N AY
Sbjct: 328 DSMIRKGI---KPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAY 384
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K GMI + + ++M+ + P+++ + LID+ K D E F +++ P +
Sbjct: 385 AKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNI 444
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
FNS++ +AE + +M P+ + + +I V R + D
Sbjct: 445 VVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDL 504
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ +G + ++ YC+ G EA+ +F+ ++G++P TY L Y A+
Sbjct: 505 MEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR 564
Query: 446 KELVQKLLKRMEQNGIVPN 464
+ L + M + G+ P
Sbjct: 565 IDDAYCLFREMLRKGVTPG 583
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 147/376 (39%), Gaps = 45/376 (11%)
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
F + K W + I L + K L M GC PD Y L+
Sbjct: 113 FGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLC 172
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
+ + +AL L + RC PN+V+Y+I++ VD+ LF E+ + +
Sbjct: 173 NEKRAEEALE--LLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGI 230
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
PD+ TY V+D K + E V +M N KP+ T+N LI Y + ++ Q
Sbjct: 231 PPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQ 290
Query: 312 VFKSLMHSKEKPTLPTFNSMIINY----GKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
+ + + KP T+ S++ NY G+ R +A + F M P TY +I
Sbjct: 291 MLEEMSARGLKPDCYTYGSLL-NYLCKNGRCR---EARFFFDSMIRKGIKPKVSTYGILI 346
Query: 368 -----------------------------------TMYGYCDNVSRAREIFDELSKLGKD 392
+ Y C + +A +IF+++ + G
Sbjct: 347 HGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLS 406
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
V A+++A C G +A++ F N GVTP+ + L + E ++L
Sbjct: 407 PNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEEL 466
Query: 453 LKRMEQNGIVPNKRFF 468
+ M GI PN FF
Sbjct: 467 VYEMLDQGICPNAVFF 482
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 139/323 (43%), Gaps = 9/323 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA--HLHTRDKAKALA 201
D I++ + K G AM +F++MR G P+ Y ALI A L D A+
Sbjct: 373 DHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEV-- 430
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
F +M E PNIV +N L+ ++ L E+ + + P+ +N +
Sbjct: 431 ----KFNQMIN-EGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTL 485
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ G + E ++ M+ +PD ++ LI Y D+ E+VF ++
Sbjct: 486 ICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGL 545
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
PT T+N+++ Y A A +F++M TP +TY I+ S A+E
Sbjct: 546 SPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKE 605
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
++ + G + T N +L C + EA +F++ + G+ + T+ ++ A
Sbjct: 606 LYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALL 665
Query: 442 KANMKELVQKLLKRMEQNGIVPN 464
K KE L + NG+VPN
Sbjct: 666 KGGRKEDAMDLFAAIPANGLVPN 688
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 149/404 (36%), Gaps = 46/404 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMG--KKGQTRLAMWLFSEM 171
+L + L + + LE+ M + S I + G +GQ LF EM
Sbjct: 166 ILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEM 225
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRA 229
+ G PD Y +I KA+ +A G FQ+M G KPN TYN L+
Sbjct: 226 IDRGIPPDVVTYTTVIDGLC----KAQLFDRAEGVFQQMIDNGF---KPNNYTYNCLIHG 278
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
+V + +E+ L PD YTY +++ KNG +E M KP
Sbjct: 279 YLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPK 338
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
+ T+ +LI Y + A +M ++ + P FN Y K + KA +F
Sbjct: 339 VSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFN 398
Query: 350 KMTAMKYTPSFITYECIIT---------------------------------MYGYC--D 374
KM +P+ + Y +I +YG C D
Sbjct: 399 KMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVD 458
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
RA E+ E+ G N ++ C G E L + ++GV PD+ +Y
Sbjct: 459 KWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYT 518
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
L Y + +K+ M G+ P + + L + S+
Sbjct: 519 PLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSA 562
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 149/361 (41%), Gaps = 7/361 (1%)
Query: 109 SEHCF-LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWL 167
H F + F K + +++F M +Q + Y LI + K G+ A
Sbjct: 373 DHHIFNIFFSAYAKCGMIDKAMDIFNKM-RQHGLSPNVVNYGALIDALCKLGRVDDAEVK 431
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
F++M N G P+ V+N+L+ L T DK + A+ L Y +G+ C PN V +N L+
Sbjct: 432 FNQMINEGVTPNIVVFNSLVYG-LCTVDKWER-AEELVYEMLDQGI--C-PNAVFFNTLI 486
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
V + L + + PD ++Y ++ Y G E E V M S
Sbjct: 487 CNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLS 546
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P +T+N L+ Y D +F+ ++ P + T+N+++ + + +A+ +
Sbjct: 547 PTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKEL 606
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
+ M TY I+ + V A ++F L G + + T M+ A
Sbjct: 607 YLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLK 666
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
G +A LF G+ P+ TY+L+ + + E L ME+NG PN +
Sbjct: 667 GGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQM 726
Query: 468 F 468
Sbjct: 727 L 727
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 116/277 (41%), Gaps = 9/277 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI+ G+T A +F M + G P YN L LH A + A F
Sbjct: 517 YTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTL----LHGYCSASRIDDAYCLF 572
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
++M KG+ P +VTYN +L Q + + L+ + S DIYTYN +++
Sbjct: 573 REMLRKGV---TPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGL 629
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K+ + E + + S + +IITF ++I + K + +F ++ + P +
Sbjct: 630 CKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNV 689
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+ + N + + + +F M P+ ++ + ++SRA +
Sbjct: 690 VTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSK 749
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
L + ++ ST + ++ + + A L E H
Sbjct: 750 LDERNFSVEASTTSLLMSIFTSDEYQHHAKSLPEKYH 786
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 62/162 (38%), Gaps = 7/162 (4%)
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM------KYTP 358
D ++F L+H ++ FN ++ +AR +E M K P
Sbjct: 29 GLDDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAP 88
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA-DLL 417
+ TY +I + ++ F + K G M +N +L+ C EA D+L
Sbjct: 89 NLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVL 148
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
+ +G PD+ +Y +L K E +LL M +
Sbjct: 149 LQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADD 190
>gi|224144580|ref|XP_002325338.1| predicted protein [Populus trichocarpa]
gi|222862213|gb|EEE99719.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 167/371 (45%), Gaps = 22/371 (5%)
Query: 89 SFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIY 148
S S P V T N ++RS LF+ GK D Q +E +R Q +R + Y
Sbjct: 119 SLSGCPPDVITYNT---IIRS-----LFDN-GKFD---QAVEFWRG-QLRRGCLPYLIPY 165
Query: 149 SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQ 208
+ LI ++ K T A+ + +M GC PD YN+L+ + +++ A + Y
Sbjct: 166 TILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNSLV--NFASKEGKYEDAALIIYNI 223
Query: 209 KMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
GME PN +TYN LL + D+V+ + + ++ P + TYN +++ K
Sbjct: 224 LSHGME---PNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSHPPTVVTYNILINGLCKC 280
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
G+++ + +M S C PDIIT+N L+ + K D+ QVF L S P L T+
Sbjct: 281 GLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDEALQVFVLLSDSNCSPGLITY 340
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
N++I + +A ++ +M P IT+ ++ + + D V A EI E+ K
Sbjct: 341 NTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGITHRSLVWGFCWIDQVEDAVEILREMGK 400
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM--- 445
+ S ++ C N A + E + PD Y L K+ A M
Sbjct: 401 RDHRINSSAYRLVINGLCRNKRVDIAIQVLEMMISGRYKPDEEIYSTLIKSVADAGMVEE 460
Query: 446 -KELVQKLLKR 455
EL QKL++R
Sbjct: 461 ADELHQKLIER 471
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 157/358 (43%), Gaps = 28/358 (7%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ D Y+ ++ K+ Q R A+ L +M SGC PD YN +I + +A+
Sbjct: 89 VPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKFDQAVE 148
Query: 202 KALGYFQKMKGMERCKPNIVTYNILL----RACAQARNVDQVNALFKELHESILAPDIYT 257
G ++ C P ++ Y IL+ + C R ++ + +++ PD+ T
Sbjct: 149 FWRGQLRR-----GCLPYLIPYTILIELVWKHCGTVRALE----VLEDMAIEGCYPDLVT 199
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN +++ K G ++ ++ + S+ +P+ IT+N L+ S +D+++++ +
Sbjct: 200 YNSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMK 259
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
+ PT+ T+N +I K L +A F +M + +P ITY ++T V
Sbjct: 260 KTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVD 319
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
A ++F LS + T N +++ G EA L+ G+ PD T++ L
Sbjct: 320 EALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGITHRSLV 379
Query: 438 KAYTKANMKELVQKLLKRMEQ--------------NGIVPNKRFFLEALETFSSSLAG 481
+ + E ++L+ M + NG+ NKR + A++ ++G
Sbjct: 380 WGFCWIDQVEDAVEILREMGKRDHRINSSAYRLVINGLCRNKRVDI-AIQVLEMMISG 436
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 139/324 (42%), Gaps = 7/324 (2%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
I ++ + LI + + G+ A + M SG PD YN ++ K + L
Sbjct: 54 IPNSTCSTNLIRGLVRIGRIERASRVLKTMVMSGLVPDVITYNMMVGGFC----KRRQLR 109
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
A+ + M + C P+++TYN ++R+ DQ ++ P + Y +
Sbjct: 110 SAIDLLEDMS-LSGCPPDVITYNTIIRSLFDNGKFDQAVEFWRGQLRRGCLPYLIPYTIL 168
Query: 262 MDAYGKN-GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ K+ G ++ +E VL M C PD++T+N L++ K ++ + +++
Sbjct: 169 IELVWKHCGTVRALE-VLEDMAIEGCYPDLVTYNSLVNFASKEGKYEDAALIIYNILSHG 227
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P T+NS++ + L + + + M + P+ +TY +I C V RA
Sbjct: 228 MEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSHPPTVVTYNILINGLCKCGLVERAI 287
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
F ++ + T N +L A C G+ EA +F + +P TY +
Sbjct: 288 NFFVQMVSENCSPDIITYNTLLTALCKEGMVDEALQVFVLLSDSNCSPGLITYNTVIDGL 347
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
T+ + KL +M + GI P+
Sbjct: 348 TRRGYMDEALKLYNQMIEKGIAPD 371
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 105/274 (38%), Gaps = 1/274 (0%)
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
LH K +L +A M + + PN L+R + +++ + + K + S
Sbjct: 29 LHNLCKKGSLMEATKLIDIMSRVNQI-PNSTCSTNLIRGLVRIGRIERASRVLKTMVMSG 87
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
L PD+ TYN ++ + K ++ +L M + C PD+IT+N +I S FD+
Sbjct: 88 LVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKFDQAV 147
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+ ++ + P L + +I K +A V + M P +TY ++
Sbjct: 148 EFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNSLVNFA 207
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
A I + G + T N++L + C GL E D + P
Sbjct: 208 SKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSHPPTV 267
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
TY +L K + E +M P+
Sbjct: 268 VTYNILINGLCKCGLVERAINFFVQMVSENCSPD 301
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 106/241 (43%), Gaps = 6/241 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L W + E+ M+K + Y+ LI + K G A+ F +M +
Sbjct: 238 LLHSLCSCGLWDEVDEILAIMKKTS-HPPTVVTYNILINGLCKCGLVERAINFFVQMVSE 296
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
C PD YN L+TA K + +AL F + C P ++TYN ++ +
Sbjct: 297 NCSPDIITYNTLLTALC----KEGMVDEALQVFVLLSD-SNCSPGLITYNTVIDGLTRRG 351
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+D+ L+ ++ E +APD T+ ++ + +++ +L M + + +
Sbjct: 352 YMDEALKLYNQMIEKGIAPDGITHRSLVWGFCWIDQVEDAVEILREMGKRDHRINSSAYR 411
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
L+I+ + + D QV + ++ + KP ++++I + A + +A+ + QK+
Sbjct: 412 LVINGLCRNKRVDIAIQVLEMMISGRYKPDEEIYSTLIKSVADAGMVEEADELHQKLIER 471
Query: 355 K 355
K
Sbjct: 472 K 472
>gi|302822703|ref|XP_002993008.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
gi|300139208|gb|EFJ05954.1| hypothetical protein SELMODRAFT_136281 [Selaginella moellendorffii]
Length = 431
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 139/317 (43%), Gaps = 5/317 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y +I + K G LAM +M +G PD +YN + L KA + +A F
Sbjct: 52 YKCVIQSLVKAGNVVLAMDFLDKMIKTGLEPDTLLYNVV----LDGLGKANMIDEACKLF 107
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
MK M C + TY IL+R+ + + ++ LF E+ E P Y V+D Y K
Sbjct: 108 ASMKSM-GCPADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCK 166
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G I+ VL +M PD T N LI + + + ++F+ + S +
Sbjct: 167 AGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVS 226
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
FN+M+ GKA G A +M A P+ IT+ +I G S A ++ E+
Sbjct: 227 FNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMR 286
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G V T M+EA+ G +A +F + G + + TY LL A KA +
Sbjct: 287 SAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRYQ 346
Query: 448 LVQKLLKRMEQNGIVPN 464
+ + M++ GI+P+
Sbjct: 347 DARDIYFDMKKKGILPD 363
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 138/294 (46%), Gaps = 7/294 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT +Y+ ++ +GK A LF+ M++ GC D Y LI + + K +A
Sbjct: 83 DTLLYNVVLDGLGKANMIDEACKLFASMKSMGCPADDYTYAILI----RSLGRCKRDEEA 138
Query: 204 LGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
F +M+ ER C P+ Y ++ +A ++ + K++ + LAPD YT N ++
Sbjct: 139 TLLFDEME--ERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLI 196
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
A + G + + RMK + + ++FN ++D GK Q + K
Sbjct: 197 TAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIK 256
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P TFN++I G+A+ +A V Q+M + TP TY C+I + N+ +A E+
Sbjct: 257 PNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEM 316
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
F ++ K G V T N +++A G +A ++ + G+ PD+ T +L
Sbjct: 317 FGDMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPDAITATVL 370
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 138/312 (44%), Gaps = 5/312 (1%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
+ + ++++ CR V NA+I A+ ++ + K + FQ++ KPN TY +
Sbjct: 1 MLAAIQDTPCRYHVLVSNAVIAAY----GRSSRIHKVMDEFQELD-KHGSKPNAYTYKCV 55
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+++ +A NV ++ ++ L PD YN V+D GK MI E + + MKS C
Sbjct: 56 IQSLVKAGNVVLAMDFLDKMIKTGLEPDTLLYNVVLDGLGKANMIDEACKLFASMKSMGC 115
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
D T+ +LI S G+ + ++ +F + P+ P + ++I Y KA A
Sbjct: 116 PADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMV 175
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
V +KM P T +IT A EIF+ + K G + + NAML+
Sbjct: 176 VLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCG 235
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
G A + G+ P+S T+ L +A K+L+ M G+ P+
Sbjct: 236 KAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVF 295
Query: 467 FFLEALETFSSS 478
+ +E F+ +
Sbjct: 296 TYTCMIEAFAKA 307
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 173/407 (42%), Gaps = 29/407 (7%)
Query: 74 SEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFR 133
+E+L S +++ + +++ + LNK V V C L + K+ + + R
Sbjct: 417 NEKLPSLDVLELAEKAYGEMLDAHVVLNK-VNVSNLARC------LCGAGKFEKAYSIIR 469
Query: 134 WMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT 193
M + +I DT YSK+I ++ + A LF EM+++ PD Y LI +
Sbjct: 470 EMM-SKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFC-- 526
Query: 194 RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP 253
K L +A +F +M + C PN+VTY L+ A +AR + N LF+ + P
Sbjct: 527 --KVGLLQQARKWFDEMV-RDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIP 583
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD----------------IITFNLLI 297
++ TY ++D + K+G I++ + +RM+ N PD I T+ L+
Sbjct: 584 NVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALV 643
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
D K + + + +P ++++I + K +A+ VF KM+ Y
Sbjct: 644 DGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYG 703
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P+ TY +I + A ++ + + V M++ C G EA L
Sbjct: 704 PNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRL 763
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G P+ TY + + KA + +L+++M G PN
Sbjct: 764 MSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPN 810
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 159/370 (42%), Gaps = 44/370 (11%)
Query: 108 RSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWL 167
+ ++ FLLFEE+ K + D Y+ LI K G + A
Sbjct: 495 KVDNAFLLFEEM-----------------KSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
F EM GC P+ Y ALI A+L KA+ ++ A F+ M E C PN+VTY L+
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYL----KARKMSSANELFEMMLS-EGCIPNVVTYTALI 592
Query: 228 ----------RAC---AQAR---NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMI 271
+AC A+ R ++ V+ FK +I P+I+TY ++D K +
Sbjct: 593 DGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKV 652
Query: 272 KEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM 331
KE +L M C+P+ I ++ LID + K D+ + VF + P + T++S+
Sbjct: 653 KEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSL 712
Query: 332 IINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL-- 389
I K + A V +M P+ I Y +I G C V + E + +S +
Sbjct: 713 IDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMID--GLC-KVGKTDEAYRLMSMMEE 769
Query: 390 -GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
G V T AM++ + G + L G P+ TY++L A + +
Sbjct: 770 KGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDD 829
Query: 449 VQKLLKRMEQ 458
+LL M+Q
Sbjct: 830 AHQLLDEMKQ 839
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 160/380 (42%), Gaps = 54/380 (14%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI------------------- 187
I++ LI + G A L +M + GC+P VYN LI
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAE 430
Query: 188 -------TAHL-----HTRDKAKALAKALGYFQKMKGMER------CKPNIVTYNILLRA 229
AH+ + + A+ L A G F+K + R P+ TY+ ++
Sbjct: 431 KAYGEMLDAHVVLNKVNVSNLARCLCGA-GKFEKAYSIIREMMSKGFIPDTSTYSKVIGL 489
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
A VD LF+E+ + + PD++TY ++D++ K G++++ M + C P+
Sbjct: 490 LCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPN 549
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK-----------A 338
++T+ LI +Y K + ++F+ ++ P + T+ ++I + K A
Sbjct: 550 VVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYA 609
Query: 339 RLQGKAEY-----VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
R++G A+ F+ P+ TY ++ V AR++ D +S G +
Sbjct: 610 RMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEP 669
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
+A+++ +C G EA ++F G P+ TY L K +L K+L
Sbjct: 670 NHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVL 729
Query: 454 KRMEQNGIVPNKRFFLEALE 473
RM +N PN + E ++
Sbjct: 730 SRMLENSCAPNVIIYTEMID 749
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 150/338 (44%), Gaps = 14/338 (4%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E+F M + I + Y+ LI K GQ A +++ MR + PD +Y +
Sbjct: 571 ELFEMMLSEGC-IPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDG 629
Query: 190 HLHTRD--KAKALAKALGYFQKMK---------GMERCKPNIVTYNILLRACAQARNVDQ 238
++ + AL L K+K +E C+PN + Y+ L+ + +D+
Sbjct: 630 NIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDE 689
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+F ++ E P++YTY+ ++D K+ + VLSRM N C P++I + +ID
Sbjct: 690 AQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMID 749
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
K D+ ++ + P + T+ +MI +GKA K + ++M A P
Sbjct: 750 GLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAP 809
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+F+TY +I + A ++ DE+ + ++ ++E + LL
Sbjct: 810 NFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF-NREFIISLGLLD 868
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
E + N+ V P Y++L ++ KA EL +L K M
Sbjct: 869 EIAENVAV-PIIPAYRILIDSFCKAGRLELALELHKXM 905
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 143/361 (39%), Gaps = 49/361 (13%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
+ ++ K G+ R A+ L + + D +Y +I+ +A +A+ + +M
Sbjct: 273 FVHLLCKAGRWREALALIEKEEF---KLDTVIYTQMISGLC----EASLFEEAMDFLSRM 325
Query: 211 KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
+ C PN+VTY ILL C + R + + + + P +N ++ AY ++G
Sbjct: 326 RS-SSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGD 384
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLID-------------------SYGK--------- 302
+L +M C+P + +N+LI +YG+
Sbjct: 385 YSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLN 444
Query: 303 -------------RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
F+K + + +M P T++ +I A A +F+
Sbjct: 445 KVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFE 504
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
+M + P TY +I + + +AR+ FDE+ + G V T A++ AY
Sbjct: 505 EMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKAR 564
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFL 469
+ A+ LFE + G P+ TY L + K+ E ++ RM N +P+ +
Sbjct: 565 KMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYF 624
Query: 470 E 470
+
Sbjct: 625 K 625
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/387 (19%), Positives = 154/387 (39%), Gaps = 47/387 (12%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
++ F W +Q Y +Y L+ V+G G R+ E+R+ D + L+
Sbjct: 146 VKFFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREIRDE----DKEILGKLLN 201
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
+ + AL ++K + KP+ +TYN L+R +A +D + +E+ +
Sbjct: 202 VLIRKCCRNGLWNVALEELGRLKDLGY-KPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260
Query: 249 SILAPDIYT--------------------------------YNGVMDAYGKNGMIKEMES 276
S D YT Y ++ + + +E
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMD 320
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
LSRM+S+ C P+++T+ +L+ +++ + +++ ++ P+ FNS+I Y
Sbjct: 321 FLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYC 380
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--------VSRAREIFDELSK 388
++ A + +KM P ++ Y +I G C N + A + + E+
Sbjct: 381 RSGDYSYAYKLLKKMGDCGCQPGYVVYNILIG--GICGNEKLPSLDVLELAEKAYGEMLD 438
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
+ ++ + C G +A + + G PD+STY + A+ +
Sbjct: 439 AHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDN 498
Query: 449 VQKLLKRMEQNGIVPNKRFFLEALETF 475
L + M+ N +VP+ + +++F
Sbjct: 499 AFLLFEEMKSNHVVPDVFTYTILIDSF 525
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 173/407 (42%), Gaps = 29/407 (7%)
Query: 74 SEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFR 133
+E+L S +++ + +++ + LNK V V C L + K+ + + R
Sbjct: 417 NEKLPSLDVLELAEKAYGEMLDAHVVLNK-VNVSNLARC------LCGAGKFEKAYSIIR 469
Query: 134 WMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT 193
M + +I DT YSK+I ++ + A LF EM+++ PD Y LI +
Sbjct: 470 EMM-SKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFC-- 526
Query: 194 RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP 253
K L +A +F +M + C PN+VTY L+ A +AR + N LF+ + P
Sbjct: 527 --KVGLLQQARKWFDEMV-RDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIP 583
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD----------------IITFNLLI 297
++ TY ++D + K+G I++ + +RM+ N PD I T+ L+
Sbjct: 584 NVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALV 643
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
D K + + + +P ++++I + K +A+ VF KM+ Y
Sbjct: 644 DGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYG 703
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P+ TY +I + A ++ + + V M++ C G EA L
Sbjct: 704 PNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRL 763
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G P+ TY + + KA + +L+++M G PN
Sbjct: 764 MSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPN 810
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 159/370 (42%), Gaps = 44/370 (11%)
Query: 108 RSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWL 167
+ ++ FLLFEE+ K + D Y+ LI K G + A
Sbjct: 495 KVDNAFLLFEEM-----------------KSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
F EM GC P+ Y ALI A+L KA+ ++ A F+ M E C PN+VTY L+
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYL----KARKMSSANELFEMMLS-EGCIPNVVTYTALI 592
Query: 228 ----------RAC---AQAR---NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMI 271
+AC A+ R ++ V+ FK +I P+I+TY ++D K +
Sbjct: 593 DGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKV 652
Query: 272 KEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM 331
KE +L M C+P+ I ++ LID + K D+ + VF + P + T++S+
Sbjct: 653 KEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSL 712
Query: 332 IINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL-- 389
I K + A V +M P+ I Y +I G C V + E + +S +
Sbjct: 713 IDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMID--GLC-KVGKTDEAYRLMSMMEE 769
Query: 390 -GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
G V T AM++ + G + L G P+ TY++L A + +
Sbjct: 770 KGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDD 829
Query: 449 VQKLLKRMEQ 458
+LL M+Q
Sbjct: 830 AHQLLDEMKQ 839
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 160/380 (42%), Gaps = 54/380 (14%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI------------------- 187
I++ LI + G A L +M + GC+P VYN LI
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAE 430
Query: 188 -------TAHL-----HTRDKAKALAKALGYFQKMKGMER------CKPNIVTYNILLRA 229
AH+ + + A+ L A G F+K + R P+ TY+ ++
Sbjct: 431 KAYGEMLDAHVVLNKVNVSNLARCLCGA-GKFEKAYSIIREMMSKGFIPDTSTYSKVIGL 489
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
A VD LF+E+ + + PD++TY ++D++ K G++++ M + C P+
Sbjct: 490 LCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPN 549
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK-----------A 338
++T+ LI +Y K + ++F+ ++ P + T+ ++I + K A
Sbjct: 550 VVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYA 609
Query: 339 RLQGKAEY-----VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
R++G A+ F+ P+ TY ++ V AR++ D +S G +
Sbjct: 610 RMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEP 669
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
+A+++ +C G EA ++F G P+ TY L K +L K+L
Sbjct: 670 NHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVL 729
Query: 454 KRMEQNGIVPNKRFFLEALE 473
RM +N PN + E ++
Sbjct: 730 SRMLENSCAPNVIIYTEMID 749
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 150/338 (44%), Gaps = 14/338 (4%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E+F M + I + Y+ LI K GQ A +++ MR + PD +Y +
Sbjct: 571 ELFEMMLSEGC-IPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDG 629
Query: 190 HLHTRD--KAKALAKALGYFQKMK---------GMERCKPNIVTYNILLRACAQARNVDQ 238
++ + AL L K+K +E C+PN + Y+ L+ + +D+
Sbjct: 630 NIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDE 689
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+F ++ E P++YTY+ ++D K+ + VLSRM N C P++I + +ID
Sbjct: 690 AQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMID 749
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
K D+ ++ + P + T+ +MI +GKA K + ++M A P
Sbjct: 750 GLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAP 809
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+F+TY +I + A ++ DE+ + ++ ++E + LL
Sbjct: 810 NFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF-NREFIISLGLLD 868
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
E + N+ V P Y++L ++ KA EL +L K M
Sbjct: 869 EIAENVAV-PIIPAYRILIDSFCKAGRLELALELHKEM 905
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 143/361 (39%), Gaps = 49/361 (13%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
+ ++ K G+ R A+ L + + D +Y +I+ +A +A+ + +M
Sbjct: 273 FVHLLCKAGRWREALALIEKEEF---KLDTVIYTQMISGLC----EASLFEEAMDFLSRM 325
Query: 211 KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
+ C PN+VTY ILL C + R + + + + P +N ++ AY ++G
Sbjct: 326 RS-SSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGD 384
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLID-------------------SYGK--------- 302
+L +M C+P + +N+LI +YG+
Sbjct: 385 YSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLN 444
Query: 303 -------------RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
F+K + + +M P T++ +I A A +F+
Sbjct: 445 KVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFE 504
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
+M + P TY +I + + +AR+ FDE+ + G V T A++ AY
Sbjct: 505 EMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKAR 564
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFL 469
+ A+ LFE + G P+ TY L + K+ E ++ RM N +P+ +
Sbjct: 565 KMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYF 624
Query: 470 E 470
+
Sbjct: 625 K 625
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/387 (19%), Positives = 154/387 (39%), Gaps = 47/387 (12%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
++ F W +Q Y +Y L+ V+G G R+ E+R+ D + L+
Sbjct: 146 VKFFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREIRDE----DKEILGKLLN 201
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
+ + AL ++K + KP+ +TYN L+R +A +D + +E+ +
Sbjct: 202 VLIRKCCRNGLWNVALEELGRLKDLGY-KPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260
Query: 249 SILAPDIYT--------------------------------YNGVMDAYGKNGMIKEMES 276
S D YT Y ++ + + +E
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMD 320
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
LSRM+S+ C P+++T+ +L+ +++ + +++ ++ P+ FNS+I Y
Sbjct: 321 FLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYC 380
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--------VSRAREIFDELSK 388
++ A + +KM P ++ Y +I G C N + A + + E+
Sbjct: 381 RSGDYSYAYKLLKKMGDCGCQPGYVVYNILIG--GICGNEKLPSLDVLELAEKAYGEMLD 438
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
+ ++ + C G +A + + G PD+STY + A+ +
Sbjct: 439 AHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDN 498
Query: 449 VQKLLKRMEQNGIVPNKRFFLEALETF 475
L + M+ N +VP+ + +++F
Sbjct: 499 AFLLFEEMKSNHVVPDVFTYTILIDSF 525
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 161/363 (44%), Gaps = 11/363 (3%)
Query: 109 SEHCF-LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWL 167
H F ++F K + + +F M +Q+W Y LI + K G+ A+
Sbjct: 341 DHHIFNIMFNAYAKKAMIDEAMHIFDKM-RQQWLSPGVVNYGALIDALCKLGRVDDAVLK 399
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
F++M N G PD V+++L+ L T DK + K +F+ + + + N +NIL+
Sbjct: 400 FNQMINEGVTPDIFVFSSLVYG-LCTVDKWEKAEKL--FFEVLD--QGIRLNAAFFNILM 454
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
+ V + L + + PD+ +YN ++D + G I E +L M S K
Sbjct: 455 CNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLK 514
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
PD T+N L+ Y K + D +F+ ++ P + T+N+++ + +A+ +
Sbjct: 515 PDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKEL 574
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+ M + TY I+ G C N V A ++F L + + T+N M+ A
Sbjct: 575 YLNMINNRRKCDIYTYTIILN--GLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGAL 632
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
G +A LF G+ PD TY+L+ + K E + +L ME+NG PN
Sbjct: 633 LKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNS 692
Query: 466 RFF 468
R
Sbjct: 693 RML 695
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 133/326 (40%), Gaps = 21/326 (6%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I + K A +F M + G RP+ Y LI +L T K K + + L
Sbjct: 205 YTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLST-GKWKEVVQML--- 260
Query: 208 QKMKGMERCKPNIVTYNILLR------ACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
Q+M +P+ V Y +LL C +ARN+ F L + P + Y +
Sbjct: 261 QEMS-THGLQPDCVIYAVLLDYLCKNGRCTEARNI------FDSLIRKGIKPHVTIYGIL 313
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ Y G + EM S L M N PD FN++ ++Y K+ D+ +F +
Sbjct: 314 LHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWL 373
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRA 379
P + + ++I K A F +M TP + ++ YG C D +A
Sbjct: 374 SPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLV--YGLCTVDKWEKA 431
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
++F E+ G + + N ++ C G EA L + + V PD +Y L
Sbjct: 432 EKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDG 491
Query: 440 YTKANMKELVQKLLKRMEQNGIVPNK 465
+ + KLL M G+ P++
Sbjct: 492 HCLTGRIDEAAKLLDVMVSIGLKPDE 517
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 137/338 (40%), Gaps = 3/338 (0%)
Query: 132 FRWMQKQRWYIADTGIYSKLI-AVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
F + K W + +T I+ +L+ + K L M GC + YN L+
Sbjct: 115 FGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGL 174
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
+ + +AL L + G PN+VTY ++ +A+ VD+ +F+ + +
Sbjct: 175 CNEKRAEEALE--LMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKG 232
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
+ P+ +TY ++ Y G KE+ +L M ++ +PD + + +L+D K +
Sbjct: 233 VRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEAR 292
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+F SL+ KP + + ++ Y + M +P + + Y
Sbjct: 293 NIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAY 352
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
+ A IFD++ + V A+++A C G +A L F N GVTPD
Sbjct: 353 AKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDI 412
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+ L + E +KL + GI N FF
Sbjct: 413 FVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFF 450
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 144/330 (43%), Gaps = 6/330 (1%)
Query: 123 DKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSV 182
DKW + ++F + Q + + ++ L+ + ++G+ A L M RPD
Sbjct: 426 DKWEKAEKLFFEVLDQGIRL-NAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVIS 484
Query: 183 YNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL 242
YN L+ H T +A AK L + G+ KP+ TYN LL +AR +D +L
Sbjct: 485 YNTLVDGHCLTGRIDEA-AKLLDVMVSI-GL---KPDEFTYNTLLHGYCKARRIDDAYSL 539
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
F+E+ L P + TYN ++ + G E + + M +N+ K DI T+ ++++ +
Sbjct: 540 FREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCR 599
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
D+ ++F+SL + + T N MI K + A +F ++A P T
Sbjct: 600 NNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVET 659
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y I ++ E+F + + G LNA++ G A +
Sbjct: 660 YRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLD 719
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
+ ++ST +L Y++A ++L + L
Sbjct: 720 EKNFSLEASTTSMLISIYSRAEYQQLAKSL 749
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 132/312 (42%), Gaps = 6/312 (1%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
+ KW + +++ + M D IY+ L+ + K G+ A +F + G +P +
Sbjct: 250 TGKWKEVVQMLQEMSTHGLQ-PDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVT 308
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
+Y L LH AL++ + M P+ +NI+ A A+ +D+
Sbjct: 309 IYGIL----LHGYATEGALSEMHSFLDLMV-RNGVSPDHHIFNIMFNAYAKKAMIDEAMH 363
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
+F ++ + L+P + Y ++DA K G + + ++M + PDI F+ L+
Sbjct: 364 IFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLC 423
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
++K E++F ++ + FN ++ N + +A+ + M + P I
Sbjct: 424 TVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVI 483
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
+Y ++ + + A ++ D + +G T N +L YC +A LF
Sbjct: 484 SYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREM 543
Query: 422 HNMGVTPDSSTY 433
G+TP TY
Sbjct: 544 LMKGLTPGVVTY 555
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 119/324 (36%), Gaps = 53/324 (16%)
Query: 194 RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN-------VDQVNALFKEL 246
R + L AL F +M R ++ T+N LL ++AR V N + +E
Sbjct: 26 RSGSLGLDDALKLFDEMLTYAR-PASVRTFNRLLTVVSRARCSSASELVVSLFNRMIREC 84
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSR-MKSNQCKPDIITFNLLIDSYGKRQA 305
+ AP TY ++ + + G +K + +K+ + + F L+ +
Sbjct: 85 SVKV-APSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKR 143
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM------KYTPS 359
D+ + M + TL + I+ G + +AE + M M +TP+
Sbjct: 144 VDEATDILLRRM-PEFGCTLNVISYNILLKGLCN-EKRAEEALELMHMMADDGDGSHTPN 201
Query: 360 FITYECIITMYGYCDNVSRAREIFD----------------------------ELSKLGK 391
+TY +I V RA+ +F E+ ++ +
Sbjct: 202 VVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQ 261
Query: 392 DMKVSTLN-------AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+M L +L+ C NG TEA +F++ G+ P + Y +L Y
Sbjct: 262 EMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEG 321
Query: 445 MKELVQKLLKRMEQNGIVPNKRFF 468
+ L M +NG+ P+ F
Sbjct: 322 ALSEMHSFLDLMVRNGVSPDHHIF 345
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 125/270 (46%), Gaps = 5/270 (1%)
Query: 211 KGMERCK-----PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
K M+RC P I TYNIL+ +AR D +F L + L PD+++YN ++D +
Sbjct: 104 KRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGF 163
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G + + + +M+ P+++T++ LI+ K + DK E+V + ++ + +P
Sbjct: 164 SKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNN 223
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+N +I Y + + ++ VF++M++ P +T + AR+IFD
Sbjct: 224 MTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDS 283
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ G V + A+L Y G D LF GV PD + L AY + M
Sbjct: 284 MVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGM 343
Query: 446 KELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ + + M + G+ P+ F + F
Sbjct: 344 MDKSLLMFEDMTKQGVNPDIITFSTVISAF 373
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 165/375 (44%), Gaps = 20/375 (5%)
Query: 106 VVRSEHCF--LL--FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQT 161
VV H F L+ + LG DK L +F M KQ D +S +I+ + G+
Sbjct: 324 VVPDRHVFNTLINAYARLGMMDKSLL---MFEDMTKQ-GVNPDIITFSTVISAFCRLGRL 379
Query: 162 RLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV 221
AM F+ M ++G PD +VY+ LI + RD KA K L KG+ P +
Sbjct: 380 DDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKA--KELISDMLSKGI---PPPCI 434
Query: 222 TY--NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+ +I+ C + R + + + +H P++ T+N ++D Y G +KE +L
Sbjct: 435 KFFTSIINNLCKEGRVAEGKDVVDLIIHTG-QRPNLITFNSLVDGYCLVGNMKEAVGLLD 493
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
M+S +PDI T+N L+D Y K D +F+ ++H + T ++N ++ +AR
Sbjct: 494 SMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQAR 553
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVST 397
A+ +F +M S TY ++ G C N A + ++L + + T
Sbjct: 554 RTIVAKEMFHEMIESGMAVSIHTYATVLG--GLCRNNCTDEANMLLEKLFSMNVKFDILT 611
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
N ++ A G EA LF G+ P TY+++ K E L ME
Sbjct: 612 FNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSME 671
Query: 458 QNGIVPNKRFFLEAL 472
++ P+ R E +
Sbjct: 672 KSSCTPDSRILNEII 686
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 156/339 (46%), Gaps = 11/339 (3%)
Query: 129 LEVFRWMQKQRWYIADTGIYSK--LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+E+F+ M + A IY+ LI + + L + +F + +G PD YNAL
Sbjct: 100 VELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNAL 159
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I K + KA F KM+ + PN+VTY+ L+ + + +D+ + +++
Sbjct: 160 IDGF----SKEGEVDKAHDLFYKMEE-QGIMPNVVTYSSLINGLCKTKEMDKAERVLRQM 214
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
+ + P+ TYN ++ Y +GM KE V M S+ PD+ N + + K
Sbjct: 215 VGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRI 274
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ +F S++ KP + ++ +++ Y A + +F M P + +
Sbjct: 275 KEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTL 334
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I Y + ++ +F++++K G + + T + ++ A+C G +A F + + GV
Sbjct: 335 INAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGV 394
Query: 427 TPDSSTYKLLYKAYTKANMKELV--QKLLKRMEQNGIVP 463
PD++ Y L + + N ++LV ++L+ M GI P
Sbjct: 395 PPDTAVYSCLIQG--QCNRRDLVKAKELISDMLSKGIPP 431
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 157/361 (43%), Gaps = 14/361 (3%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
S W + + VF+ M + D G + + + K G+ + A +F M G +PD
Sbjct: 236 SGMWKESVRVFKEMSSS-LLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVI 294
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
Y AL LH A +A F M E P+ +N L+ A A+ +D+
Sbjct: 295 SYGAL----LHGYATAGCIAGMDNLFNVMV-CEGVVPDRHVFNTLINAYARLGMMDKSLL 349
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
+F+++ + + PDI T++ V+ A+ + G + + + M PD ++ LI
Sbjct: 350 MFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQC 409
Query: 302 KRQAFDKMEQVFKSLMHSK-EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
R+ K +++ ++ P + F S+I N K + + V + P+
Sbjct: 410 NRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNL 469
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
IT+ ++ Y N+ A + D + +G + + T N +++ YC +G +A LF +
Sbjct: 470 ITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRD 529
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLA 480
+ VT S +Y ++ +A + +++ M ++G+ ++ T+++ L
Sbjct: 530 MLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMA-------VSIHTYATVLG 582
Query: 481 G 481
G
Sbjct: 583 G 583
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 136/297 (45%), Gaps = 8/297 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL-HTRDKAKALAKALGY 206
Y+ LI G + ++ +F EM +S PD N+ +TA H R K +A
Sbjct: 226 YNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIK-----EARDI 280
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F M ++ KP++++Y LL A A + ++ LF + + PD + +N +++AY
Sbjct: 281 FDSMV-LKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYA 339
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+ GM+ + + M PDIITF+ +I ++ + D + F ++ + P
Sbjct: 340 RLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTA 399
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT-YECIITMYGYCDNVSRAREIFDE 385
++ +I R KA+ + M + P I + II V+ +++ D
Sbjct: 400 VYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDL 459
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+ G+ + T N++++ YC+ G EA L ++ ++GV PD TY L Y K
Sbjct: 460 IIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCK 516
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 137/310 (44%), Gaps = 10/310 (3%)
Query: 163 LAMWLFSEMRNSGCRPD--PSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKP 218
LA+ LF M C P+ P++Y I + + R + L L F ++ G+ P
Sbjct: 98 LAVELFKRMDRCAC-PEAAPTIYTYNILINCYRRARRPDLG--LPVFGRLLRTGL---GP 151
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
++ +YN L+ ++ VD+ + LF ++ E + P++ TY+ +++ K + + E VL
Sbjct: 152 DVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVL 211
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
+M +P+ +T+N LI Y + + +VFK + S P + NS + K
Sbjct: 212 RQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKH 271
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
+A +F M P I+Y ++ Y ++ +F+ + G
Sbjct: 272 GRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVF 331
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N ++ AY G+ ++ L+FE+ GV PD T+ + A+ + + + M
Sbjct: 332 NTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMID 391
Query: 459 NGIVPNKRFF 468
G+ P+ +
Sbjct: 392 TGVPPDTAVY 401
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 116/255 (45%), Gaps = 13/255 (5%)
Query: 159 GQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL-HTRDKAKALAKALGYFQKMKGMERCK 217
G + A+ L M + G PD YN L+ + H R + AL F+ M +R
Sbjct: 483 GNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGR-----IDDALTLFRDML-HKRVT 536
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
V+YNI+L QAR +F E+ ES +A I+TY V+ +N E +
Sbjct: 537 LTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANML 596
Query: 278 LSRMKSNQCKPDIITFNLLIDS---YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
L ++ S K DI+TFN++I + G+RQ + +++F ++ PT+ T+ MI N
Sbjct: 597 LEKLFSMNVKFDILTFNIVIRAMFKVGRRQ---EAKELFAAISTYGLVPTILTYRVMITN 653
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
K A+ +F M TP II M V++A ++ K G +
Sbjct: 654 LIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPE 713
Query: 395 VSTLNAMLEAYCMNG 409
+T + ++ + +NG
Sbjct: 714 ATTTSLLIYLFSVNG 728
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 51/121 (42%)
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P+ TY +I Y +F L + G V + NA+++ + G +A L
Sbjct: 116 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 175
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
F G+ P+ TY L K + +++L++M G+ PN + + +S+
Sbjct: 176 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 235
Query: 478 S 478
S
Sbjct: 236 S 236
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 163/373 (43%), Gaps = 32/373 (8%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ + + K + L + R M++ I + IYS +I + K G+ A LF+EM+
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQA 233
G PD YN++I + + A Q+M +ER P++VTYN L+ A +
Sbjct: 285 GIFPDLFTYNSMIVGFC----SSGRWSDAEQLLQEM--LERKISPDVVTYNALINAFVKE 338
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ L+ E+ + P+ TY+ ++D + K + E + M + C P++ITF
Sbjct: 339 GKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398
Query: 294 NLLIDSY-GKRQAFDKMEQVFKSLMHSKEKPTL----PTFNSMIINYGKARLQGKAEYVF 348
N LID Y G ++ D ME L+H + L T+N++I + A +
Sbjct: 399 NTLIDGYCGAKRIDDGME-----LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDM-----------KV 395
Q+M + P +T C + G CDN + A E+F + K KD+ V
Sbjct: 454 QEMISSGLCPDIVT--CDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDV 511
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
T N ++ G EA+ L+E + G+ PD+ TY + K + + ++
Sbjct: 512 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDS 571
Query: 456 MEQNGIVPNKRFF 468
M PN F
Sbjct: 572 MGSKSFSPNVVTF 584
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 161/362 (44%), Gaps = 18/362 (4%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L D+ + L+ F M + + ++ L+ + ++G+ A+ L M
Sbjct: 155 LLHGLCVEDRVSEALDFFHQMFETTCR-PNVVTFTTLMNGLCREGRIVEAVALLDRMMED 213
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQA 233
G +P Y ++ D AL +KM+ + PN+V Y+ ++ + C
Sbjct: 214 GLQPTQITYGTIVDGMCKKGDTVSAL----NLLRKMEEVSHIIPNVVIYSAIIDSLCKDG 269
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
R+ D N LF E+ E + PD++TYN ++ + +G + E +L M + PD++T+
Sbjct: 270 RHSDAQN-LFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTY 328
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N LI+++ K F + E+++ ++ P T++SMI + K AE++F M
Sbjct: 329 NALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT 388
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
+P+ IT+ +I Y + E+ E+++ G +T N ++ + + G
Sbjct: 389 KGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNA 448
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKAN-------MKELVQKLLKRMEQ----NGIV 462
A L + + G+ PD T L M +++QK K ++ NG+
Sbjct: 449 ALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVE 508
Query: 463 PN 464
P+
Sbjct: 509 PD 510
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 154/359 (42%), Gaps = 27/359 (7%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
S +W ++ + M +R D Y+ LI K+G+ A L+ EM G P+
Sbjct: 303 SGRWSDAEQLLQEML-ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
Y+++I +++ A A+ + Y KG C PN++T+N L+ A+ +D
Sbjct: 362 TYSSMIDGFCK-QNRLDA-AEHMFYLMATKG---CSPNLITFNTLIDGYCGAKRIDDGME 416
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
L E+ E+ L D TYN ++ + G + +L M S+ PDI+T + L+D
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476
Query: 302 KRQAFDKMEQVFKSLMHSKE-----------KPTLPTFNSMI---INYGKARLQGKAEYV 347
++FK + SK+ +P + T+N +I IN GK +AE +
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL---EAEEL 533
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+++M P ITY +I G C + A ++FD + V T ++ Y
Sbjct: 534 YEEMPHRGIVPDTITYSSMID--GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 591
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
C G + LF G+ ++ TY L + K + + M +G+ P+
Sbjct: 592 CKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 141/314 (44%), Gaps = 8/314 (2%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME-RCKPNIVT 222
A+ LFS+M S RP PSV + + R + L +L +QKM+ + RC +I +
Sbjct: 63 AIDLFSDMLRS--RPLPSVVDFCKLMGVVVRMERPDLVISL--YQKMERKQIRC--DIYS 116
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
+NIL++ + + F ++ + L PD+ T+ ++ + E +M
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF 176
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
C+P+++TF L++ + + + +M +PT T+ +++ K
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236
Query: 343 KAEYVFQKMTAMKYT-PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
A + +KM + + P+ + Y II S A+ +F E+ + G + T N+M
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ +C +G ++A+ L + ++PD TY L A+ K ++L M GI
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356
Query: 462 VPNKRFFLEALETF 475
+PN + ++ F
Sbjct: 357 IPNTITYSSMIDGF 370
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 113/280 (40%), Gaps = 22/280 (7%)
Query: 140 WYIADTGIYSKLIA----VMGKKGQTRL--AMWLFSEMRNSGCRPDPSVYNALITAHLHT 193
+ +A G LI + G G R+ M L EM +G D + YN LI
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443
Query: 194 RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES---- 249
D L AL Q+M C P+IVT + LL + +FK + +S
Sbjct: 444 GD----LNAALDLLQEMISSGLC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDL 498
Query: 250 -------ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
+ PD+ TYN ++ G E E + M PD IT++ +ID K
Sbjct: 499 DASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCK 558
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ D+ Q+F S+ P + TF ++I Y KA +F +M + IT
Sbjct: 559 QSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAIT 618
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
Y +I + N++ A +IF E+ G T+ ML
Sbjct: 619 YITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 88/204 (43%), Gaps = 16/204 (7%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYI----------ADTGIYSKLIAVMGKKGQT 161
C L + L + K LE+F+ MQK + + D Y+ LI+ + +G+
Sbjct: 468 CDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKF 527
Query: 162 RLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV 221
A L+ EM + G PD Y+++I K L +A F M G + PN+V
Sbjct: 528 LEAEELYEEMPHRGIVPDTITYSSMIDGLC----KQSRLDEATQMFDSM-GSKSFSPNVV 582
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
T+ L+ +A VD LF E+ + + TY ++ + K G I + M
Sbjct: 583 TFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEM 642
Query: 282 KSNQCKPDIITF-NLLIDSYGKRQ 304
S+ PD IT N+L + K +
Sbjct: 643 ISSGVYPDTITIRNMLTGLWSKEE 666
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 166/398 (41%), Gaps = 53/398 (13%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K K ++ E+ M QR I D YS LI + K + A LF M+
Sbjct: 196 MLIDILCKEGKVIEANELLEVMI-QRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQK 254
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK------GMERCKPNIVTYNILL 227
GCRPD Y L+ T + + AL Q+M G+ +CKP +++Y+I++
Sbjct: 255 LGCRPDAIAYGTLMKGLCQTGN----INTALQLHQEMLNDTGRYGI-KCKPTLISYSIII 309
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
+ R D+ LFKE+ + PD+ +Y ++ + +G ++ + + + M +
Sbjct: 310 DGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQ 369
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
PD+ T ++LID K+ + ++ + ++ P + T +++ KA +
Sbjct: 370 PDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQL 429
Query: 348 FQKMTAMKYTPSFIT-----------------------------------------YECI 366
F KM + P+ +T Y I
Sbjct: 430 FLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSII 489
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I C ARE+F E+ LG V + +++ +C +G +A LF ++GV
Sbjct: 490 IDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGV 549
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
PD +T+ +L K +LL+ M Q G +PN
Sbjct: 550 QPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPN 587
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 162/400 (40%), Gaps = 57/400 (14%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + K K ++ E+ M QR I D YS LI + K + A LF M+
Sbjct: 15 VLIDMFCKEGKVIEANELLEVMV-QRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKK 73
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK------GMERCKPNIVTYNILL 227
GCRPD Y L+ T + AL Q+M G+ +CKP +V+Y+I++
Sbjct: 74 LGCRPDAIAYGTLMKGLCQT----GKINIALHLHQEMLNDTSQYGI-KCKPTLVSYSIII 128
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNG--------------------------- 260
+ R D+ LFKE+ + PD+ +Y
Sbjct: 129 DGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIR 188
Query: 261 --------VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
++D K G + E +L M C DI+T++ LI + + ++
Sbjct: 189 SDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRL 248
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT------AMKYTPSFITYECI 366
F S+ +P + +++ + A + Q+M +K P+ I+Y I
Sbjct: 249 FMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSII 308
Query: 367 ITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
I G C + ARE+F E+ G V + ++ +C++G +A LF ++
Sbjct: 309 ID--GLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDV 366
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G+ PD +T +L K KLL+ + Q G +P+
Sbjct: 367 GIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPD 406
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 158/357 (44%), Gaps = 16/357 (4%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ + L K + + E+F+ M+ Q + D Y+ LI G+ A LF+EM +
Sbjct: 307 IIIDGLCKDRREDEARELFKEMKAQ-GIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLD 365
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G +PD + + LI L + K K L + C P++VT L++
Sbjct: 366 VGIQPDVTTSSVLIDM-LCKKGKVIEANKLLEVVIQ----RGCIPDVVTCTTLVKGLCMK 420
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN------QCK 287
+ + LF ++ + P++ T +M ++G IK + M S+ CK
Sbjct: 421 HRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCK 480
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P+ I+++++ID K D+ ++FK + P + ++ S+I + ++ A+Y+
Sbjct: 481 PNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYL 540
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F +M + P T+ +I M V A E+ + + + G T +++ CM
Sbjct: 541 FNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCM 600
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK-ANMK---ELVQKLLKRMEQNG 460
N +EA LF +G PD TY L K + N+K EL +K+L Q G
Sbjct: 601 NDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYG 657
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 146/337 (43%), Gaps = 13/337 (3%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
QR I D + L+ + K + A LF +M+ GC P+ L+ + +
Sbjct: 400 QRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIK 459
Query: 198 KALAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
AL G+ CKPN ++Y+I++ + D+ LFKE+ + PD+
Sbjct: 460 IALELHKNMLSDTSPYGI-NCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDV 518
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
+Y ++ + ++G K+ + + + M +PD+ TF++LID K + ++ +
Sbjct: 519 ISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEV 578
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD- 374
++ P T+ +++ +A +F KM + P +TY + M G C
Sbjct: 579 MIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTL--MKGLCQT 636
Query: 375 -NVSRAREI----FDELSKLGKDMK--VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
N+ A E+ + + G + K V + + +++ C +G EA LF+ +GV
Sbjct: 637 GNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVI 696
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
P+ +Y L + ++ E + L M G+ N
Sbjct: 697 PNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLN 733
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 158/353 (44%), Gaps = 29/353 (8%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D S LI ++ KKG+ A L + GC PD L+ L + + ++KA
Sbjct: 371 DVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKG-LCMKHR---ISKA 426
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILA----------P 253
F KM+ + C PN+VT L++ Q+ N+ + ELH+++L+ P
Sbjct: 427 TQLFLKMQKL-GCMPNVVTCATLMKGLCQSGNI----KIALELHKNMLSDTSPYGINCKP 481
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
+ +Y+ ++D K G E + MK+ PD+I++ LI + + + + +F
Sbjct: 482 NAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLF 541
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
++ +P + TF+ +I K +A + + M P+ +TY ++ G C
Sbjct: 542 NEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVK--GLC 599
Query: 374 --DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG-LPTEADL---LFENSHNMGVT 427
D +S A ++F ++ KLG V T +++ C G + T +L + ++ G
Sbjct: 600 MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTN 659
Query: 428 --PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
PD +Y ++ K ++ ++L K M+ G++PN + + F S
Sbjct: 660 FKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRS 712
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 132/304 (43%), Gaps = 51/304 (16%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ + L K + + E+F+ M K I D Y+ LI + G+ + A +LF+EM +
Sbjct: 488 IIIDGLCKCGREDEARELFKEM-KALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVD 546
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G +PD + ++ LI + ++ A L +G C PN VTY L++
Sbjct: 547 IGVQPDVTTFSVLI--DMLCKEGKVIEANELLEVMIQRG---CIPNTVTYTTLVKGLCMN 601
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN------QCK 287
+ + LF ++ + PD+ TY +M + G IK + +M S+ K
Sbjct: 602 DRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFK 661
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
PD+I+++++ID K H +E +A +
Sbjct: 662 PDVISYSIIIDGLCK---------------HGRED--------------------EAREL 686
Query: 348 FQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
F++M A+ P+ I+Y +I +G+C + A+ +F+E+ G + T + M+ +
Sbjct: 687 FKEMKALGVIPNVISYTSLI--HGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGF 744
Query: 406 CMNG 409
C G
Sbjct: 745 CKEG 748
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 114/256 (44%), Gaps = 10/256 (3%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+P++ T +L+ + V + N L + + + DI TY+ ++ I E
Sbjct: 7 QPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQ 66
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS------KEKPTLPTFNS 330
+ MK C+PD I + L+ + + + + +++ K KPTL +++
Sbjct: 67 LFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSI 126
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV--SRAREIFDELSK 388
+I K R + +A +F++M A P I+Y +I +G+C + +A+ +F+E+
Sbjct: 127 IIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLI--HGFCRSGKWEKAKCLFNEMLD 184
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
+G V+T + +++ C G EA+ L E G D TY L K +
Sbjct: 185 VGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISE 244
Query: 449 VQKLLKRMEQNGIVPN 464
+L M++ G P+
Sbjct: 245 ATRLFMSMQKLGCRPD 260
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 11/225 (4%)
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
LH I PD+ T ++D + K G + E +L M C DI+T++ LI +
Sbjct: 2 LHVGI-QPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT------AMKYTPS 359
+ Q+F S+ +P + +++ + A ++ Q+M +K P+
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 360 FITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
++Y II G C + ARE+F E+ G V + +++ +C +G +A L
Sbjct: 121 LVSYSIIID--GLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCL 178
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
F ++G+ D +T +L K +LL+ M Q G +
Sbjct: 179 FNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCI 223
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 95/200 (47%), Gaps = 10/200 (5%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K K ++ E+ M QR I +T Y+ L+ + + A LF +M+
Sbjct: 558 VLIDMLCKEGKVIEANELLEVMI-QRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQK 616
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM-----KGMERCKPNIVTYNILLR 228
GC PD Y L+ T + + AL +KM + KP++++Y+I++
Sbjct: 617 LGCLPDVVTYGTLMKGLCQTGN----IKTALELHKKMLSDTGQYGTNFKPDVISYSIIID 672
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
+ D+ LFKE+ + P++ +Y ++ + ++G +++ + + + M +
Sbjct: 673 GLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQL 732
Query: 289 DIITFNLLIDSYGKRQAFDK 308
+ +T++++I + K DK
Sbjct: 733 NAVTYSVMIHGFCKEGQIDK 752
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 159/369 (43%), Gaps = 39/369 (10%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI- 187
+E+F M R Y + YS +I + + G+T + L M+ GC PD +YN ++
Sbjct: 181 IELFDVMV-ARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVD 239
Query: 188 ----------TAHLHTRDKAKAL--------------------AKALGYFQKMKGMERCK 217
H+ + K + +A G +MKG
Sbjct: 240 RLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKG-GNIM 298
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P++V +++L+ + V + + K + E + PD+ TYN +M+ Y + E V
Sbjct: 299 PDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKV 358
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
M S PD+ +F++L++ Y K + D+ +Q+F + H P ++N++I +
Sbjct: 359 FEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQ 418
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECI---ITMYGYCDNVSRAREIFDELSKLGKDMK 394
AR +AE +F+ M + Y P+ +TY + ++ GY D +A +F + G
Sbjct: 419 ARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLD---QAMGLFRAMENSGLKPD 475
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
+ T N M++ C G +A LF G+ P++ K + + K +
Sbjct: 476 LVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFR 535
Query: 455 RMEQNGIVP 463
+ME++ P
Sbjct: 536 QMEKDDCSP 544
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 147/317 (46%), Gaps = 5/317 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+S LI +G+ A+ LF M G +P+ Y+ +I L K + K L +
Sbjct: 164 FSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKG-LCRVGKTTEVIKLLEHM 222
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ + C+P++V YN ++ + R V++ +F ++ + + P + TY ++
Sbjct: 223 KVVG----CEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRN 278
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G KE +L+ MK PD++ F++LID K + + K++ +P + T
Sbjct: 279 LGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVAT 338
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N+++ Y +A VF+ M + P ++ ++ Y + A+++FDE++
Sbjct: 339 YNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMT 398
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G + N ++ C P EA+ LF++ H+ G P+ TY +L +K +
Sbjct: 399 HRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLD 458
Query: 448 LVQKLLKRMEQNGIVPN 464
L + ME +G+ P+
Sbjct: 459 QAMGLFRAMENSGLKPD 475
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 121/251 (48%), Gaps = 6/251 (2%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+PN++T++ L+ + + LF + P++++Y+ ++ + G E+
Sbjct: 158 EPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIK 217
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+L MK C+PD++ +N ++D K + ++ +F + + PT+ T+ S+I +G
Sbjct: 218 LLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLI--HG 275
Query: 337 KARLQGKAEYVFQKMTAMK---YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
L G+ + F + MK P + + +I + VS AR I ++++G +
Sbjct: 276 LRNL-GRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEP 334
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
V+T N ++ YC+ EA +FE + G PD ++ +L Y KA + ++L
Sbjct: 335 DVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLF 394
Query: 454 KRMEQNGIVPN 464
M G++P+
Sbjct: 395 DEMTHRGLIPD 405
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 115/278 (41%), Gaps = 37/278 (13%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L +W + + M+ + D +S LI +M K+G+ A + M
Sbjct: 272 LIHGLRNLGRWKEAFGLLNEMKGGN-IMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEM 330
Query: 175 GCRPDPSVYNALITAH-------------------------------LHTRDKAKALAKA 203
G PD + YN L+ + ++ KAK + +A
Sbjct: 331 GVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEA 390
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
F +M +G+ P+ V+YN L+ QAR + LFK++H + P++ TY+ +
Sbjct: 391 KQLFDEMTHRGL---IPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSIL 447
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+D K G + + + M+++ KPD++T+N++ID K F ++F L
Sbjct: 448 LDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGL 507
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
+P I K L +A F++M +P+
Sbjct: 508 QPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPA 545
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 94/231 (40%)
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
RN++ + F + + P I + + A + K + S+ +M+ D+++
Sbjct: 70 RNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSL 129
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+LI+ + + D V ++ +P + TF+++I + G+A +F M A
Sbjct: 130 TILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVA 189
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
Y P+ +Y II + ++ + + +G + V N +++ C + L E
Sbjct: 190 RGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNE 249
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A +F G+ P TY L + LL M+ I+P+
Sbjct: 250 AVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPD 300
>gi|19071826|dbj|BAB85657.1| PnC401 homologue [Arabidopsis thaliana]
Length = 831
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 163/333 (48%), Gaps = 7/333 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + ++ + L S++ +G +PD ++NA+I A + + L +A+ F
Sbjct: 357 YTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN----LDQAMKIF 412
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE-LHESILAPDIYTYNGVMDAYG 266
+KMK CKP T+N L++ + +++ + L L + +L P+ T N ++ A+
Sbjct: 413 EKMK-ESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWC 471
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ-VFKSLMHSKEKPTL 325
I+E +++ +M+S KPD++TFN L +Y + + E + ++H+K KP +
Sbjct: 472 NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNV 531
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T +++ Y + +A F +M + P+ + +I + +++ E+ D
Sbjct: 532 RTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDL 591
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ + G V T + ++ A+ G + ++ + G+ PD + +L K Y +A
Sbjct: 592 MEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGE 651
Query: 446 KELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
E +++L +M + G+ PN + + + + S+
Sbjct: 652 PEKAKQILNQMRKFGVRPNVVIYTQIISGWCSA 684
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 142/326 (43%), Gaps = 12/326 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT +++ +I + G AM +F +M+ SGC+P S +N LI + K L ++
Sbjct: 388 DTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGY----GKIGKLEES 443
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
M E +PN T NIL++A R +++ + ++ + PD+ T+N +
Sbjct: 444 SRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAK 503
Query: 264 AYGKNGMIKEMES-VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE- 321
AY + G E ++ RM N+ KP++ T +++ Y + KME+ + KE
Sbjct: 504 AYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEE---GKMEEALRFFYRMKEL 560
Query: 322 --KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
P L FNS+I + V M P +T+ ++ + ++ R
Sbjct: 561 GVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRC 620
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
EI+ ++ + G D + + + + Y G P +A + GV P+ Y +
Sbjct: 621 EEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAKQILNQMRKFGVRPNVVIYTQIISG 680
Query: 440 YTKAN-MKELVQKLLKRMEQNGIVPN 464
+ A MK+ +Q K G+ PN
Sbjct: 681 WCSAGEMKKAMQVYKKMCGIVGLSPN 706
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 120/266 (45%), Gaps = 2/266 (0%)
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
E KP+++TY L+ A + ++ + +L ++ ++ L PD +N +++A ++G + +
Sbjct: 348 EGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQ 407
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-KPTLPTFNSMI 332
+ +MK + CKP TFN LI YGK ++ ++ ++ + +P T N ++
Sbjct: 408 AMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILV 467
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE-IFDELSKLGK 391
+ R +A + KM + P +T+ + Y + A + I +
Sbjct: 468 QAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKV 527
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
V T ++ YC G EA F +GV P+ + L K + N + V +
Sbjct: 528 KPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGE 587
Query: 452 LLKRMEQNGIVPNKRFFLEALETFSS 477
++ ME+ G+ P+ F + +SS
Sbjct: 588 VVDLMEEFGVKPDVVTFSTLMNAWSS 613
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 110/242 (45%), Gaps = 6/242 (2%)
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ +++F L E P + TY ++ A + + S++S+++ N KPD I FN +I
Sbjct: 337 EAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAII 396
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK-ARLQGKAEYVFQKMTAMKY 356
++ + D+ ++F+ + S KPT TFN++I YGK +L+ + + +
Sbjct: 397 NASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEML 456
Query: 357 TPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG-LPTE 413
P+ T C I + +C+ + A I ++ G V T N + +AY G T
Sbjct: 457 QPNDRT--CNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTA 514
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
D++ + V P+ T + Y + E + RM++ G+ PN F ++
Sbjct: 515 EDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIK 574
Query: 474 TF 475
F
Sbjct: 575 GF 576
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/329 (18%), Positives = 142/329 (43%), Gaps = 40/329 (12%)
Query: 170 EMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA 229
+M++ G +PD +N L A + R + A+ + + + + KPN+ T ++
Sbjct: 485 KMQSYGVKPDVVTFNTL--AKAYARIGSTCTAEDMIIPRMLH--NKVKPNVRTCGTIVNG 540
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
+ +++ F + E + P+++ +N ++ + + + V+ M+ KPD
Sbjct: 541 YCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPD 600
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
++TF+ L++++ + E+++ ++ P + F+ + Y +A KA+ +
Sbjct: 601 VVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAKQILN 660
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
+M P+ + Y II+ + + +A +++ ++ +
Sbjct: 661 QMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGI-------------------- 700
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFL 469
+G++P+ +TY+ L + +A ++LLK ME +VP ++ +
Sbjct: 701 --------------VGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRK-TM 745
Query: 470 EALETFSSSLAGSQSGSAKTDLTRSLSTA 498
+ + S+ S S A T L S ST+
Sbjct: 746 QLIADGWKSIGVSNSNDANT-LGSSFSTS 773
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 96/217 (44%), Gaps = 6/217 (2%)
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
D+ + +M+ + G +E S+ + + KP +IT+ L+ + +++ F + +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
+ + KP FN++I ++ +A +F+KM P+ T+ +I YG
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 374 DNVSRAREIFDELSKLGKDM---KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
+ + + D + L +M T N +++A+C EA + + GV PD
Sbjct: 438 GKLEESSRLLDMM--LRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDV 495
Query: 431 STYKLLYKAYTKANMKELVQK-LLKRMEQNGIVPNKR 466
T+ L KAY + + ++ RM N + PN R
Sbjct: 496 VTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVR 532
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 4/127 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +S L + G+ A + ++MR G RP+ +Y +I+ A + KA
Sbjct: 635 DIHAFSILAKGYARAGEPEKAKQILNQMRKFGVRPNVVIYTQIISGWC----SAGEMKKA 690
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ ++KM G+ PN+ TY L+ +A+ + L K++ + P T + D
Sbjct: 691 MQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIAD 750
Query: 264 AYGKNGM 270
+ G+
Sbjct: 751 GWKSIGV 757
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 141/302 (46%), Gaps = 5/302 (1%)
Query: 163 LAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVT 222
A ++ EM SG + YN LI A L L +F++M+ RC PN+VT
Sbjct: 186 FAEKVYREMIASGVSLNVFSYNILIRGFC----AAGNLEMGLRFFEEME-RNRCLPNVVT 240
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
YN ++ A + + +D+ L + + L P++ TYN V++ + G I+E VL+ M
Sbjct: 241 YNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMD 300
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
PD +T+N L++ Y K F + + ++ + P + T+ S+I KA
Sbjct: 301 RKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLN 360
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
+A F +M P+ +TY +I + + A I+DE+ + G + T NA+L
Sbjct: 361 RAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALL 420
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+C++G EA L G++PD +Y + + + + ++ M + G+
Sbjct: 421 NGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVS 480
Query: 463 PN 464
P+
Sbjct: 481 PD 482
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 171/409 (41%), Gaps = 59/409 (14%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
++ + D Y+ L+ K G A+ L SEM +G PD Y +LI +T KA
Sbjct: 301 RKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLI----NTMCKA 356
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
L +A+ +F +M + +PN VTY L+ +Q +D+ ++ E+ S P I T
Sbjct: 357 GNLNRAMEFFDQMH-VRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVT 415
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN +++ + +G ++E +L M+ PD+++++ +I + + Q D+ Q+ ++
Sbjct: 416 YNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMV 475
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DN 375
P T++S+I + R +A +FQ+M P TY +I GYC +
Sbjct: 476 EKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLIN--GYCKEGD 533
Query: 376 VSRAREIFDELSKLG--------------------------------------------- 390
++ A + DE+ K G
Sbjct: 534 LNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDT 593
Query: 391 -----KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
D++ ++ A+++ +CM GL EAD +FE+ P+ + Y ++ + +
Sbjct: 594 LIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGN 653
Query: 446 KELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTRS 494
KL K M G +P+ + ++ S Q D+ RS
Sbjct: 654 VHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRS 702
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 143/321 (44%), Gaps = 11/321 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI G + + F EM + C P+ YN +I A+ K K + +A
Sbjct: 206 YNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYC----KLKRIDEAFKLL 261
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ M G+E +PN++TYN+++ + +++ + + E+ APD TYN +++ Y K
Sbjct: 262 RSM-GLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCK 320
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + + S M N PD++T+ LI++ K ++ + F + +P T
Sbjct: 321 VGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVT 380
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ S+I + + +A ++ +M + P+ +TY ++ + + A + +
Sbjct: 381 YTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGME 440
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM---GVTPDSSTYKLLYKAYTKAN 444
G V + + ++ +C E D F+ + M GV+PD+ TY L + +
Sbjct: 441 GKGLSPDVVSYSTIIAGFCRY---QELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQR 497
Query: 445 MKELVQKLLKRMEQNGIVPNK 465
L + M ++P++
Sbjct: 498 RLNEACDLFQEMLNKSLLPDE 518
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 117/276 (42%), Gaps = 8/276 (2%)
Query: 206 YFQKMKGME-RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
+FQ +K C + +++++++C+ +++ + + P + +YN ++D+
Sbjct: 117 FFQCLKDTYFMCNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDS 176
Query: 265 YGK-NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ + E V M ++ ++ ++N+LI + + + F+ + ++ P
Sbjct: 177 IVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLP 236
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE-- 381
+ T+N++I Y K + +A + + M P+ +TY +I G C V R E
Sbjct: 237 NVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVIN--GLC-RVGRIEETS 293
Query: 382 -IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ E+ + G T N ++ YC G +A +L G+ PD TY L
Sbjct: 294 GVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTM 353
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
KA + +M G+ PN + + FS
Sbjct: 354 CKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFS 389
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 158/352 (44%), Gaps = 40/352 (11%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + K G+TR A+ + ++ D +YN +I ++ K KA++ A +
Sbjct: 167 YRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIII----NSLCKDKAVSDAYQLY 222
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M +R P++VT+N L+ + + LF E+ + PD+YT++ ++DA K
Sbjct: 223 SEMI-TKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCK 281
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+G I +++L+ M PD++T++ L+D Y +K + VF ++ P +
Sbjct: 282 DGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHS 341
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N MI GK ++ +A +F++M P +TY +I +S A ++ DE+
Sbjct: 342 YNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMH 401
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA---- 443
G + T N++++ C N +A L + + G+ P TY +L K
Sbjct: 402 NNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLK 461
Query: 444 NMKELVQK-------------------------------LLKRMEQNGIVPN 464
N +++ Q LL +ME NGI+P+
Sbjct: 462 NAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPD 513
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 145/322 (45%), Gaps = 11/322 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++ LI GQ + A LF EM PD ++ L+ A +D AK
Sbjct: 233 DVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDAL--CKDGNITRAKN 290
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ +G+ P++VTY+ L+ V++ +F + +AP ++YN +++
Sbjct: 291 MLAVMMKQGV---IPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMIN 347
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
GK M+ E S+ M PD +T+N LID K Q+ MH+ P
Sbjct: 348 GLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDE-MHNNGIP 406
Query: 324 T-LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAR 380
+ T+NS+I K KA + +K+ PS TY +I G C + A+
Sbjct: 407 ADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILID--GLCKGGRLKNAQ 464
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
++F +L G + T N M+ C GL EA++L N G+ PD+ TY+ + +A
Sbjct: 465 DVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRAL 524
Query: 441 TKANMKELVQKLLKRMEQNGIV 462
+ + E +KLL+ M G++
Sbjct: 525 FRKDENEKAEKLLREMIIRGLL 546
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 140/336 (41%), Gaps = 32/336 (9%)
Query: 159 GQTRLAMWLFSEMRNSGCRPDPSVYNALITA---------HLHTRDKAKALA-------- 201
G+ A +F+++ G P +N LI LH D AL
Sbjct: 108 GEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSY 167
Query: 202 --------------KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
AL +K++G + ++V YNI++ + + + V L+ E+
Sbjct: 168 RTLINGLCKIGETRAALQMLKKIEG-KLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMI 226
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
++PD+ T+N ++ + G +KE + M PD+ TF++L+D+ K
Sbjct: 227 TKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNIT 286
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
+ + + +M P + T++S++ Y KA++VF M+ + P +Y +I
Sbjct: 287 RAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMI 346
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
G V A +F E+ G T N++++ C G + A L + HN G+
Sbjct: 347 NGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIP 406
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
D TY L K + + L+K+++ GI P
Sbjct: 407 ADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQP 442
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 119/275 (43%), Gaps = 10/275 (3%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K + + M KQ I D YS L+ + A +FS M
Sbjct: 274 ILVDALCKDGNITRAKNMLAVMMKQ-GVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSR 332
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACA 231
G P YN +I K K + +AL F++M KG+ P+ VTYN L+
Sbjct: 333 LGVAPHAHSYNIMING----LGKIKMVDEALSLFKEMCCKGIA---PDTVTYNSLIDGLC 385
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ + L E+H + + DI TYN ++D KN I + +++ ++K +P +
Sbjct: 386 KLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMY 445
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
T+N+LID K + VF+ L+ T+N MI K L +AE + KM
Sbjct: 446 TYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKM 505
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
P +TYE II D +A ++ E+
Sbjct: 506 ENNGIIPDAVTYETIIRALFRKDENEKAEKLLREM 540
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 139/325 (42%), Gaps = 40/325 (12%)
Query: 177 RPDPSV--YNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
RP PS+ +N ++ + + + A +L + ++KG+ P IVT+NIL+
Sbjct: 52 RPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGIT---PTIVTFNILVNCYCHLG 108
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE--------------MESV--- 277
+ ++F ++ + P T+N +++ NG +KE ++ V
Sbjct: 109 EMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYR 168
Query: 278 ------------------LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
L +++ D++ +N++I+S K +A Q++ ++
Sbjct: 169 TLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITK 228
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
+ P + TFNS+I+ + +A +F +M P T+ ++ N++RA
Sbjct: 229 RISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRA 288
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+ + + K G V T +++++ YC+ +A +F +GV P + +Y ++
Sbjct: 289 KNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMING 348
Query: 440 YTKANMKELVQKLLKRMEQNGIVPN 464
K M + L K M GI P+
Sbjct: 349 LGKIKMVDEALSLFKEMCCKGIAPD 373
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 4/160 (2%)
Query: 302 KRQAFDKMEQV--FKSLMHSKEKPTLPTFNSMIINYGKARLQG--KAEYVFQKMTAMKYT 357
K FD V F ++ + P++ FN ++ + KA A + ++ T
Sbjct: 32 KSNDFDVNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGIT 91
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P+ +T+ ++ Y + ++ A IF ++ KLG T N ++ C+NG EA
Sbjct: 92 PTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHF 151
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
++ +G D +Y+ L K ++LK++E
Sbjct: 152 HDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIE 191
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 154/346 (44%), Gaps = 16/346 (4%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K + + D Y+ +++ M +G+ A + EM+ G PD YN LI + D
Sbjct: 288 KSKGFQPDLQTYNPILSWMCNEGR---ASEVLREMKGIGLVPDSVSYNILIRGCSNNGD- 343
Query: 197 AKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
L A Y +M +GM P TYN L+ ++ L +E+ E + D
Sbjct: 344 ---LETAFAYRDEMVKQGM---VPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLD 397
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
TYN V++ Y ++G K+ ++ M ++ KP T+ LI +R + +++F+
Sbjct: 398 SVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFE 457
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
++ KP L N+++ + +A + ++M M P +TY C+ M G C
Sbjct: 458 KVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCL--MRGLCG 515
Query: 375 N--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
ARE+ E+ + G + N ++ Y G A ++ + ++G P T
Sbjct: 516 EGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLT 575
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
Y L K +K EL ++LL+ M+ GIVPN F +E S S
Sbjct: 576 YNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSKS 621
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 111/253 (43%), Gaps = 11/253 (4%)
Query: 126 LQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
++ E+ +++ + D+ Y+ +I + G + A L EM G +P Y +
Sbjct: 379 IEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTS 438
Query: 186 LITAHLH---TRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL 242
LI TR+ + K +G KGM KP++V N L+ N+D+ +L
Sbjct: 439 LIYVLCRRNKTREADELFEKVVG-----KGM---KPDLVMMNTLMDGHCATGNMDRAFSL 490
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
KE+ + PD TYN +M G +E ++ MK KPD I++N LI Y K
Sbjct: 491 LKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSK 550
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ V ++ PTL T+N+++ K + AE + ++M + P+ +
Sbjct: 551 KGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSS 610
Query: 363 YECIITMYGYCDN 375
+ +I DN
Sbjct: 611 FCSVIEAMSKSDN 623
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 133/330 (40%), Gaps = 22/330 (6%)
Query: 152 IAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL----------- 200
IAV+ K + L E+ ++ +++ L+ AH + K+ L
Sbjct: 110 IAVVSKLSSPKSVTQLLKEVVSTRKNSVRDLFDELVLAHDRLQTKSTILFDFMVRFYCQL 169
Query: 201 -----AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
A Y K KG + P T N +L ++ ++ + +++ + ++
Sbjct: 170 RMVDEAIECFYLMKEKGFD---PKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNV 226
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
YT+N +++ K G +K+ + L M+S KP I+T+N L+ Y R + +
Sbjct: 227 YTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISE 286
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
+ +P L T+N ++ +G+A V ++M + P ++Y +I +
Sbjct: 287 MKSKGFQPDLQTYNPILSWMCN---EGRASEVLREMKGIGLVPDSVSYNILIRGCSNNGD 343
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+ A DE+ K G T N ++ M A++L G+ DS TY +
Sbjct: 344 LETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 403
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+ Y + + L M +GI P +
Sbjct: 404 VINGYCQHGDAKKAFALHDEMMTDGIKPTQ 433
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 163/373 (43%), Gaps = 32/373 (8%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ + + K + L + R M++ I + IYS +I + K G+ A LF+EM+
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQA 233
G PD YN++I + + A Q+M +ER P++VTYN L+ A +
Sbjct: 285 GIFPDLFTYNSMIVGFC----SSGRWSDAEQLLQEM--LERKISPDVVTYNALINAFVKE 338
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ L+ E+ + P+ TY+ ++D + K + E + M + C P++ITF
Sbjct: 339 GKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398
Query: 294 NLLIDSY-GKRQAFDKMEQVFKSLMHSKEKPTL----PTFNSMIINYGKARLQGKAEYVF 348
N LID Y G ++ D ME L+H + L T+N++I + A +
Sbjct: 399 NTLIDGYCGAKRIDDGME-----LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDM-----------KV 395
Q+M + P +T C + G CDN + A E+F + K KD+ V
Sbjct: 454 QEMISSGLCPDIVT--CDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDV 511
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
T N ++ G EA+ L+E + G+ PD+ TY + K + + ++
Sbjct: 512 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDS 571
Query: 456 MEQNGIVPNKRFF 468
M PN F
Sbjct: 572 MGSKSFSPNVVTF 584
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 151/329 (45%), Gaps = 17/329 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ L+ + ++G+ A+ L M G +P Y ++ D AL
Sbjct: 187 FTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL----NLL 242
Query: 208 QKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+KM+ + PN+V Y+ ++ + C R+ D N LF E+ E + PD++TYN ++ +
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQN-LFTEMQEKGIFPDLFTYNSMIVGFC 301
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+G + E +L M + PD++T+N LI+++ K F + E+++ ++ P
Sbjct: 302 SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T++SMI + K AE++F M +P+ IT+ +I Y + E+ E+
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY-------KA 439
++ G +T N ++ + + G A L + + G+ PD T L K
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481
Query: 440 YTKANMKELVQKLLKRMEQ----NGIVPN 464
M +++QK K ++ NG+ P+
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPD 510
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 154/359 (42%), Gaps = 27/359 (7%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
S +W ++ + M +R D Y+ LI K+G+ A L+ EM G P+
Sbjct: 303 SGRWSDAEQLLQEML-ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
Y+++I +++ A A+ + Y KG C PN++T+N L+ A+ +D
Sbjct: 362 TYSSMIDGFCK-QNRLDA-AEHMFYLMATKG---CSPNLITFNTLIDGYCGAKRIDDGME 416
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
L E+ E+ L D TYN ++ + G + +L M S+ PDI+T + L+D
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476
Query: 302 KRQAFDKMEQVFKSLMHSKE-----------KPTLPTFNSMI---INYGKARLQGKAEYV 347
++FK + SK+ +P + T+N +I IN GK +AE +
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL---EAEEL 533
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+++M P ITY +I G C + A ++FD + V T ++ Y
Sbjct: 534 YEEMPHRGIVPDTITYSSMID--GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 591
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
C G + LF G+ ++ TY L + K + + M +G+ P+
Sbjct: 592 CKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 143/314 (45%), Gaps = 8/314 (2%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME-RCKPNIVT 222
A+ LFS+M S RP PSV + + R + L +L +QKM+ + RC +I +
Sbjct: 63 AIDLFSDMLRS--RPLPSVVDFCKLMGVVVRMERPDLVISL--YQKMERKQIRC--DIYS 116
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
+ IL++ + + F ++ + L PD+ T+N ++ + E ++ +M
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
C+P+++TF L++ + + + +M +PT T+ +++ K
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236
Query: 343 KAEYVFQKMTAMKYT-PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
A + +KM + + P+ + Y II S A+ +F E+ + G + T N+M
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ +C +G ++A+ L + ++PD TY L A+ K ++L M GI
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356
Query: 462 VPNKRFFLEALETF 475
+PN + ++ F
Sbjct: 357 IPNTITYSSMIDGF 370
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 113/280 (40%), Gaps = 22/280 (7%)
Query: 140 WYIADTGIYSKLIA----VMGKKGQTRL--AMWLFSEMRNSGCRPDPSVYNALITAHLHT 193
+ +A G LI + G G R+ M L EM +G D + YN LI
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443
Query: 194 RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES---- 249
D L AL Q+M C P+IVT + LL + +FK + +S
Sbjct: 444 GD----LNAALDLLQEMISSGLC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDL 498
Query: 250 -------ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
+ PD+ TYN ++ G E E + M PD IT++ +ID K
Sbjct: 499 DASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCK 558
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ D+ Q+F S+ P + TF ++I Y KA +F +M + IT
Sbjct: 559 QSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAIT 618
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
Y +I + N++ A +IF E+ G T+ ML
Sbjct: 619 YITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 88/204 (43%), Gaps = 16/204 (7%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYI----------ADTGIYSKLIAVMGKKGQT 161
C L + L + K LE+F+ MQK + + D Y+ LI+ + +G+
Sbjct: 468 CDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKF 527
Query: 162 RLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV 221
A L+ EM + G PD Y+++I K L +A F M G + PN+V
Sbjct: 528 LEAEELYEEMPHRGIVPDTITYSSMIDGLC----KQSRLDEATQMFDSM-GSKSFSPNVV 582
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
T+ L+ +A VD LF E+ + + TY ++ + K G I + M
Sbjct: 583 TFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEM 642
Query: 282 KSNQCKPDIITF-NLLIDSYGKRQ 304
S+ PD IT N+L + K +
Sbjct: 643 ISSGVYPDTITIRNMLTGLWSKEE 666
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 163/373 (43%), Gaps = 32/373 (8%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ + + K + L + R M++ I + IYS +I + K G+ A LF+EM+
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQA 233
G PD YN++I + + A Q+M +ER P++VTYN L+ A +
Sbjct: 285 GIFPDLFTYNSMIVGFC----SSGRWSDAEQLLQEM--LERKISPDVVTYNALINAFVKE 338
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ L+ E+ + P+ TY+ ++D + K + E + M + C P++ITF
Sbjct: 339 GKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398
Query: 294 NLLIDSY-GKRQAFDKMEQVFKSLMHSKEKPTL----PTFNSMIINYGKARLQGKAEYVF 348
N LID Y G ++ D ME L+H + L T+N++I + A +
Sbjct: 399 NTLIDGYCGAKRIDDGME-----LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDM-----------KV 395
Q+M + P +T C + G CDN + A E+F + K KD+ V
Sbjct: 454 QEMISSGLCPDIVT--CDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDV 511
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
T N ++ G EA+ L+E + G+ PD+ TY + K + + ++
Sbjct: 512 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDS 571
Query: 456 MEQNGIVPNKRFF 468
M PN F
Sbjct: 572 MGSKSFSPNVVTF 584
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 151/329 (45%), Gaps = 17/329 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ L+ + ++G+ A+ L M G +P Y ++ D AL
Sbjct: 187 FTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL----NLL 242
Query: 208 QKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+KM+ + PN+V Y+ ++ + C R+ D N LF E+ E + PD++TYN ++ +
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQN-LFTEMQEKGIFPDLFTYNSMIVGFC 301
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+G + E +L M + PD++T+N LI+++ K F + E+++ ++ P
Sbjct: 302 SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T++SMI + K AE++F M +P+ IT+ +I Y + E+ E+
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY-------KA 439
++ G +T N ++ + + G A L + + G+ PD T L K
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481
Query: 440 YTKANMKELVQKLLKRMEQ----NGIVPN 464
M +++QK K ++ NG+ P+
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPD 510
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 154/359 (42%), Gaps = 27/359 (7%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
S +W ++ + M +R D Y+ LI K+G+ A L+ EM G P+
Sbjct: 303 SGRWSDAEQLLQEML-ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
Y+++I +++ A A+ + Y KG C PN++T+N L+ A+ +D
Sbjct: 362 TYSSMIDGFCK-QNRLDA-AEHMFYLMATKG---CSPNLITFNTLIDGYCGAKRIDDGME 416
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
L E+ E+ L D TYN ++ + G + +L M S+ PDI+T + L+D
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476
Query: 302 KRQAFDKMEQVFKSLMHSKE-----------KPTLPTFNSMI---INYGKARLQGKAEYV 347
++FK + SK+ +P + T+N +I IN GK +AE +
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL---EAEEL 533
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+++M P ITY +I G C + A ++FD + V T ++ Y
Sbjct: 534 YEEMPHRGIVPDTITYSSMID--GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 591
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
C G + LF G+ ++ TY L + K + + M +G+ P+
Sbjct: 592 CKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 143/314 (45%), Gaps = 8/314 (2%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME-RCKPNIVT 222
A+ LFS+M S RP PSV + + R + L +L +QKM+ + RC +I +
Sbjct: 63 AIDLFSDMLRS--RPLPSVVDFCKLMGVVVRMERPDLVISL--YQKMERKQIRC--DIYS 116
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
+NIL++ + + F ++ + L PD+ T+ ++ + E ++ +M
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMF 176
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
C+P+++TF L++ + + + +M +PT T+ +++ K
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236
Query: 343 KAEYVFQKMTAMKYT-PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
A + +KM + + P+ + Y II S A+ +F E+ + G + T N+M
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ +C +G ++A+ L + ++PD TY L A+ K ++L M GI
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356
Query: 462 VPNKRFFLEALETF 475
+PN + ++ F
Sbjct: 357 IPNTITYSSMIDGF 370
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 113/280 (40%), Gaps = 22/280 (7%)
Query: 140 WYIADTGIYSKLIA----VMGKKGQTRL--AMWLFSEMRNSGCRPDPSVYNALITAHLHT 193
+ +A G LI + G G R+ M L EM +G D + YN LI
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443
Query: 194 RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES---- 249
D L AL Q+M C P+IVT + LL + +FK + +S
Sbjct: 444 GD----LNAALDLLQEMISSGLC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDL 498
Query: 250 -------ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
+ PD+ TYN ++ G E E + M PD IT++ +ID K
Sbjct: 499 DASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCK 558
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ D+ Q+F S+ P + TF ++I Y KA +F +M + IT
Sbjct: 559 QSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAIT 618
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
Y +I + N++ A +IF E+ G T+ ML
Sbjct: 619 YITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 88/204 (43%), Gaps = 16/204 (7%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYI----------ADTGIYSKLIAVMGKKGQT 161
C L + L + K LE+F+ MQK + + D Y+ LI+ + +G+
Sbjct: 468 CDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKF 527
Query: 162 RLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV 221
A L+ EM + G PD Y+++I K L +A F M G + PN+V
Sbjct: 528 LEAEELYEEMPHRGIVPDTITYSSMIDGLC----KQSRLDEATQMFDSM-GSKSFSPNVV 582
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
T+ L+ +A VD LF E+ + + TY ++ + K G I + M
Sbjct: 583 TFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEM 642
Query: 282 KSNQCKPDIITF-NLLIDSYGKRQ 304
S+ PD IT N+L + K +
Sbjct: 643 ISSGVYPDTITIRNMLTGLWSKEE 666
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 173/407 (42%), Gaps = 29/407 (7%)
Query: 74 SEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFR 133
+E+L S +++ + +++ + LNK V V C L + K+ + + R
Sbjct: 417 NEKLPSLDVLELAEKAYGEMLDAHVVLNK-VNVSNLARC------LCGAGKFEKAYSIIR 469
Query: 134 WMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT 193
M + +I DT YSK+I ++ + A LF EM+++ PD Y LI +
Sbjct: 470 EMM-SKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFC-- 526
Query: 194 RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP 253
K L +A +F +M + C PN+VTY L+ A +AR + N LF+ + P
Sbjct: 527 --KVGLLQQARKWFDEMV-RDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIP 583
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD----------------IITFNLLI 297
++ TY ++D + K+G I++ + +RM+ N PD I T+ L+
Sbjct: 584 NVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALV 643
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
D K + + + +P ++++I + K +A+ VF KM+ Y
Sbjct: 644 DGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYG 703
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P+ TY +I + A ++ + + V M++ C G EA L
Sbjct: 704 PNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRL 763
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G P+ TY + + KA + +L+++M G PN
Sbjct: 764 MSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPN 810
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 159/370 (42%), Gaps = 44/370 (11%)
Query: 108 RSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWL 167
+ ++ FLLFEE+ K + D Y+ LI K G + A
Sbjct: 495 KVDNAFLLFEEM-----------------KSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
F EM GC P+ Y ALI A+L KA+ ++ A F+ M E C PN+VTY L+
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYL----KARKMSSANELFEMMLS-EGCIPNVVTYTALI 592
Query: 228 ----------RAC---AQAR---NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMI 271
+AC A+ R ++ V+ FK +I P+I+TY ++D K +
Sbjct: 593 DGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKV 652
Query: 272 KEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM 331
KE +L M C+P+ I ++ LID + K D+ + VF + P + T++S+
Sbjct: 653 KEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSL 712
Query: 332 IINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL-- 389
I K + A V +M P+ I Y +I G C V + E + +S +
Sbjct: 713 IDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMID--GLC-KVGKTDEAYRLMSMMEE 769
Query: 390 -GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
G V T AM++ + G + L G P+ TY++L A + +
Sbjct: 770 KGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDD 829
Query: 449 VQKLLKRMEQ 458
+LL M+Q
Sbjct: 830 AHQLLDEMKQ 839
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 160/380 (42%), Gaps = 54/380 (14%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI------------------- 187
I++ LI + G A L +M + GC+P VYN LI
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAE 430
Query: 188 -------TAHL-----HTRDKAKALAKALGYFQKMKGMER------CKPNIVTYNILLRA 229
AH+ + + A+ L A G F+K + R P+ TY+ ++
Sbjct: 431 KAYGEMLDAHVVLNKVNVSNLARCLCGA-GKFEKAYSIIREMMSKGFIPDTSTYSKVIGL 489
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
A VD LF+E+ + + PD++TY ++D++ K G++++ M + C P+
Sbjct: 490 LCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPN 549
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK-----------A 338
++T+ LI +Y K + ++F+ ++ P + T+ ++I + K A
Sbjct: 550 VVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYA 609
Query: 339 RLQGKAEY-----VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
R++G A+ F+ P+ TY ++ V AR++ D +S G +
Sbjct: 610 RMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEP 669
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
+A+++ +C G EA ++F G P+ TY L K +L K+L
Sbjct: 670 NHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVL 729
Query: 454 KRMEQNGIVPNKRFFLEALE 473
RM +N PN + E ++
Sbjct: 730 SRMLENSCAPNVIIYTEMID 749
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 150/338 (44%), Gaps = 14/338 (4%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E+F M + I + Y+ LI K GQ A +++ MR + PD +Y +
Sbjct: 571 ELFEMMLSEGC-IPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDG 629
Query: 190 HLHTRD--KAKALAKALGYFQKMK---------GMERCKPNIVTYNILLRACAQARNVDQ 238
++ + AL L K+K +E C+PN + Y+ L+ + +D+
Sbjct: 630 NIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDE 689
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+F ++ E P++YTY+ ++D K+ + VLSRM N C P++I + +ID
Sbjct: 690 AQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMID 749
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
K D+ ++ + P + T+ +MI +GKA K + ++M A P
Sbjct: 750 GLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAP 809
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+F+TY +I + A ++ DE+ + ++ ++E + LL
Sbjct: 810 NFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGF-NREFIISLGLLD 868
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
E + N+ V P Y++L ++ KA EL +L K M
Sbjct: 869 EIAENVAV-PIIPAYRILIDSFCKAGRLELALELHKEM 905
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 143/361 (39%), Gaps = 49/361 (13%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
+ ++ K G+ R A+ L + + D +Y +I+ +A +A+ + +M
Sbjct: 273 FVHLLCKAGRWREALALIEKEEF---KLDTVIYTQMISGLC----EASLFEEAMDFLSRM 325
Query: 211 KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
+ C PN+VTY ILL C + R + + + + P +N ++ AY ++G
Sbjct: 326 RS-SSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGD 384
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLID-------------------SYGK--------- 302
+L +M C+P + +N+LI +YG+
Sbjct: 385 YSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLN 444
Query: 303 -------------RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
F+K + + +M P T++ +I A A +F+
Sbjct: 445 KVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFE 504
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
+M + P TY +I + + +AR+ FDE+ + G V T A++ AY
Sbjct: 505 EMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKAR 564
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFL 469
+ A+ LFE + G P+ TY L + K+ E ++ RM N +P+ +
Sbjct: 565 KMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYF 624
Query: 470 E 470
+
Sbjct: 625 K 625
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/387 (19%), Positives = 154/387 (39%), Gaps = 47/387 (12%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
++ F W +Q Y +Y L+ V+G G R+ E+R+ D + L+
Sbjct: 146 VKFFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREIRDE----DKEILGKLLN 201
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
+ + AL ++K + KP+ +TYN L+R +A +D + +E+ +
Sbjct: 202 VLIRKCCRNGLWNVALEELGRLKDLGY-KPSRLTYNALVRVFLEADRLDTAYLVHREMSD 260
Query: 249 SILAPDIYT--------------------------------YNGVMDAYGKNGMIKEMES 276
S D YT Y ++ + + +E
Sbjct: 261 SGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLFEEAMD 320
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
LSRM+S+ C P+++T+ +L+ +++ + +++ ++ P+ FNS+I Y
Sbjct: 321 FLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYC 380
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--------VSRAREIFDELSK 388
++ A + +KM P ++ Y +I G C N + A + + E+
Sbjct: 381 RSGDYSYAYKLLKKMGDCGCQPGYVVYNILIG--GICGNEKLPSLDVLELAEKAYGEMLD 438
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
+ ++ + C G +A + + G PD+STY + A+ +
Sbjct: 439 AHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDN 498
Query: 449 VQKLLKRMEQNGIVPNKRFFLEALETF 475
L + M+ N +VP+ + +++F
Sbjct: 499 AFLLFEEMKSNHVVPDVFTYTILIDSF 525
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 163/387 (42%), Gaps = 12/387 (3%)
Query: 85 VLMRSFS-----DKEPLVRTLNKYVKVVRSEHCFL-LFEELGKSDKWLQCLEVFRWMQKQ 138
+L+RSF+ D + K + H FL L + L K+ + EVF M
Sbjct: 159 ILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAM 218
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
+ D +++ ++ + K + + A +F +M G PD YN +I KA
Sbjct: 219 GFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDG----LAKAG 274
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
+AL M + C P VTY IL+ + +A +++ LF+ + S P+ Y
Sbjct: 275 HAQEALKVLDNMLA-KACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIY 333
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
++ + K+G +KE S+ M +PD+IT ++ID K F++ + F+ +M
Sbjct: 334 TSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMR 393
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
KP + T+ ++I K A + + M A P +TY C++ + +
Sbjct: 394 GGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDE 453
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNG-LPTEADLLFENSHNMGVTPDSSTYKLLY 437
A ++ DEL K + ++++ C G + D LFE S T D +
Sbjct: 454 AAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSII 513
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPN 464
K + ++ +RM G P+
Sbjct: 514 VGLCKTGRLDEACRIFQRMVSEGCKPD 540
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 149/371 (40%), Gaps = 31/371 (8%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
+ FRW +Q + D Y+ L+ ++ + + EM +G P+ +N LI
Sbjct: 103 ISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIR 162
Query: 189 AHLHTRDKAKALA-------------------------------KALGYFQKMKGMERCK 217
+ TR A+ KA F +M M
Sbjct: 163 SFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVP 222
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+ + ++R +A+ V + +F ++ + PD YN ++D K G +E V
Sbjct: 223 PDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKV 282
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L M + C P +T+ +L++S K ++ E++F+ + S +P + S+I + K
Sbjct: 283 LDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAK 342
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
+ +A +F +M Y P IT+ +I N +A + F+E+ + G V T
Sbjct: 343 SGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVT 402
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
+++ G A + + G PDS TY L + K + +LL ++
Sbjct: 403 YTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELD 462
Query: 458 QNGIVPNKRFF 468
+ PN + +
Sbjct: 463 KCSSSPNLQLY 473
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 137/337 (40%), Gaps = 11/337 (3%)
Query: 147 IYSKLIAVMGKKGQTRLAMW-LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALG 205
+YS L+ + G + LF + + + DP + ++I K L +A
Sbjct: 472 LYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLC----KTGRLDEACR 527
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARN--VDQVNALFKELHESILAPDIYTYNGVMD 263
FQ+M E CKP+ TYNIL+ ++R V++ AL +L + PD TY +
Sbjct: 528 IFQRMVS-EGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCI 586
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K G + +L S D++ + L + D+ +F+ ++ P
Sbjct: 587 GLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAP 646
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ +I K + A F +M P+ TY ++ + NV A F
Sbjct: 647 DAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRF 706
Query: 384 DELSKLGKDM-KVSTLNAMLEAYCMNGLPTEADL-LFENSHNMGVTPDSSTYKLLYKAYT 441
+ + G+ + V +A++ +C L +A L LFE+ + G P + T L+
Sbjct: 707 ESMLARGELVGSVMIYDALIHGFC-KALKVDAALKLFEDMISRGNVPTAVTSASLFDGLV 765
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
++ E Q+LL+ M G P+ F L+ S
Sbjct: 766 RSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKS 802
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 131/320 (40%), Gaps = 37/320 (11%)
Query: 182 VYNALITAHLHTRDKA-KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
V+ ++ +H+ ++ K A+ +F+ + ++ TYN L+ +N Q
Sbjct: 80 VHGQVLGSHVAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCY 139
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
A+ +E+ ++ +AP+ +++N ++ ++ + + + MK +CKPD+ TF +L+D
Sbjct: 140 AIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCL 199
Query: 301 GKRQAFDKMEQVFKSLM-----------HSK---------------------EKPTLP-- 326
K +K +VF +M H+ EK P
Sbjct: 200 CKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPD 259
Query: 327 --TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+N+MI KA +A V M A P+ +TY ++ + RA E+F
Sbjct: 260 AIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFR 319
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
++ G +++ + +G EA LF+ G PD T+ ++ K+
Sbjct: 320 VMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSG 379
Query: 445 MKELVQKLLKRMEQNGIVPN 464
E K + M + G PN
Sbjct: 380 NFEQAAKSFEEMMRGGCKPN 399
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 134/320 (41%), Gaps = 15/320 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D G+ +I + K G+ A +F M + GC+PD + YN LI +R+ A A
Sbjct: 505 DPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFA 564
Query: 204 LGYFQKMKGMERCK--PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
L + +E+ P+ VTY L + VD+ + +E D+ Y +
Sbjct: 565 L-----LHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTAL 619
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
G + S+ M PD + +I+ K + + + F ++ +
Sbjct: 620 CTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQ 679
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM-KYTPSFITYECIITMYGYCD--NVSR 378
KPT+ T+ +++ A +A + F+ M A + S + Y+ +I +G+C V
Sbjct: 680 KPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALI--HGFCKALKVDA 737
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A ++F+++ G T ++ + +G +A L + G P ++T+ +
Sbjct: 738 ALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILD 797
Query: 439 AYTKANMKELVQKLLKRMEQ 458
K++ KLLK +++
Sbjct: 798 GLRKSDES---GKLLKLVQE 814
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 120/316 (37%), Gaps = 45/316 (14%)
Query: 58 GICCVWTRPRSKRGRKSEELESKELVRVLMRSFSDK-EPLVRTLNKYVKVV------RSE 110
G+CC K GR E R+ R S+ +P T N + + R E
Sbjct: 507 GLCCSIIVGLCKTGRLDEA------CRIFQRMVSEGCKPDATTYNILINGLCRSRENRVE 560
Query: 111 HCFLLFEEL----------------------GKSDKWLQCLEVFRWMQKQRWYIADTGIY 148
F L +L G+ D+ ++ LE R + AD Y
Sbjct: 561 RAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLE----EASSRGWNADVVAY 616
Query: 149 SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQ 208
+ L + +GQ A+ LF EM G PD + Y +I + K K L A +F
Sbjct: 617 TALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLI----KVKKLEDACKFFD 672
Query: 209 KMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE-LHESILAPDIYTYNGVMDAYGK 267
+M G + KP + TY L++A A NVD+ F+ L L + Y+ ++ + K
Sbjct: 673 EMIGKGQ-KPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCK 731
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ + M S P +T L D + +K +++ + + P T
Sbjct: 732 ALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAAT 791
Query: 328 FNSMIINYGKARLQGK 343
F +++ K+ GK
Sbjct: 792 FTAILDGLRKSDESGK 807
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 157/360 (43%), Gaps = 13/360 (3%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI-YSKLIAVMGKKGQTRLAMWLFSEMR 172
++ + L ++ + + LE+FR + R +A T + Y+ +I + K + M LF E+
Sbjct: 50 IVLQSLCRAGETARALEIFRG-EMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELV 108
Query: 173 NSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
G PD YN LI + D + A+ L +G C PN+VTY++L+ +
Sbjct: 109 KRGHHPDVVTYNTLIDSLCKAGDLEE--ARRLHGGMSSRG---CVPNVVTYSVLINGLCK 163
Query: 233 ARNVDQVNALFKEL--HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK--P 288
+D+ L +E+ + P+I TYN +D K M E ++ ++ + P
Sbjct: 164 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP 223
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
D +TF+ LID K D E ++ P + T+N+++ KA +A +
Sbjct: 224 DTVTFSTLIDGLCKCGQTD--EACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMI 281
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
+ M TP ITY ++ + V A E+ ++ G V T N++++ C +
Sbjct: 282 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKS 341
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
EA + +N + PD T+ +L KA E L + M + P+ F
Sbjct: 342 DRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTF 401
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 160/361 (44%), Gaps = 24/361 (6%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI-YSKLIAVMGKKGQTRLAMWLFSEMR 172
+L L K + + E+ + M ++ + I Y+ + + K+ T A L +R
Sbjct: 156 VLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLR 215
Query: 173 NSGCR--PDPSVYNALITAHLHTRDKAKALAK---ALGYFQKMKGMERCKPNIVTYNILL 227
+ R PD ++ LI +A A GY PN+VTYN L+
Sbjct: 216 DGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYV----------PNVVTYNALV 265
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
+A +++ +A+ + + + + PD+ TY+ ++DA+ K + E +L M S C
Sbjct: 266 NGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCT 325
Query: 288 PDIITFNLLIDSYGKR----QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
P+++TFN +ID K +AF QV+ ++ P TFN +I KA +
Sbjct: 326 PNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRML----VPDKVTFNILIAGACKAGNFEQ 381
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A +F++M A P +T+ +I V AR+I D + LG V T N ++
Sbjct: 382 ASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVH 441
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
C +G E E + G P+S TY L A +A+ + +L+ +++ G P
Sbjct: 442 GLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDP 501
Query: 464 N 464
+
Sbjct: 502 D 502
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 177/412 (42%), Gaps = 30/412 (7%)
Query: 78 ESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQK 137
E++EL++ + R D P + T N + + L K + E+ R ++
Sbjct: 169 EARELIQEMTRKSCDVLPNIITYNSF------------LDGLCKQSMTAEACELMRSLRD 216
Query: 138 QRWYIA-DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
++ DT +S LI + K GQT A +M G P+ YNAL+ K
Sbjct: 217 GSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLC----K 270
Query: 197 AKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
A + +A + M KG+ P+++TY++L+ A +A VD+ L + P+
Sbjct: 271 ADKMERAHAMIESMVDKGV---TPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPN 327
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
+ T+N ++D K+ E + ++ + PD +TFN+LI K F++ +F+
Sbjct: 328 VVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFE 387
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
++ +P + TF ++I KA A + M + P+ +TY ++ +G C
Sbjct: 388 EMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLV--HGLCK 445
Query: 375 N--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
+ + E +E+ G + T +++ A C +A L + G PD+ T
Sbjct: 446 SGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVT 505
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF--SSSLAGS 482
Y +L K+ E +L+ M G P+ F S +LAG+
Sbjct: 506 YNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGT 557
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 137/301 (45%), Gaps = 9/301 (2%)
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
L + +A A+AL F+ + P IVTYN ++ ++ + LF+EL +
Sbjct: 52 LQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRG 111
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
PD+ TYN ++D+ K G ++E + M S C P+++T+++LI+ K D+
Sbjct: 112 HHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEAR 171
Query: 311 QVFKSLMHSKEK--PTLPTFNSMIINYGKARLQGKAEYVFQKM--TAMKYTPSFITYECI 366
++ + + P + T+NS + K + +A + + + +++ +P +T+ +
Sbjct: 172 ELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTL 231
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I C A D++ G V T NA++ C A + E+ + GV
Sbjct: 232 IDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGV 289
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGS 486
TPD TY +L A+ KA+ + +LL M G PN F ++ S +SG
Sbjct: 290 TPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKS---DRSGE 346
Query: 487 A 487
A
Sbjct: 347 A 347
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 149/321 (46%), Gaps = 10/321 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL-HTRDKAKALAKALGY 206
Y+ L+ + + LA+ F ++ +G R D A+I +HL +AK +AL
Sbjct: 116 YAILMDCCTRAHRPELALAFFGQLLRTGLRVD-----AIIASHLLKGFCEAKRTDEALDI 170
Query: 207 FQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHE--SILAPDIYTYNGVMD 263
C P++ +YNILL++ C Q ++ Q + L + + E ++ +PD+ YN V+D
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKS-GQADDLLRMMAEGGTVCSPDVVAYNTVID 229
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ K G + + + M PD++T++ ++ + K +A DK E + +++ P
Sbjct: 230 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP 289
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T+N++I Y +A VF++M P + ++ + AR++F
Sbjct: 290 DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVF 349
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
D ++ G++ V + ML Y G + LF+ G+ PD T+ +L KAY
Sbjct: 350 DTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANC 409
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
M + + M +G+ P+
Sbjct: 410 GMLDKAMIIFNEMRDHGVKPH 430
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 160/389 (41%), Gaps = 45/389 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIA-DTGIYSKLIAVMGKKGQTRLAMWLFSEMR 172
+L + L K Q ++ R M + + D Y+ +I K+G A LF EM
Sbjct: 189 ILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMV 248
Query: 173 NSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRAC 230
G PD Y++++ H KA+A+ KA + ++M KG+ P+ TYN L+
Sbjct: 249 QRGIPPDLVTYSSVV----HALCKARAMDKAEAFLRQMVNKGV---LPDNWTYNNLIYGY 301
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
+ + +FKE+ + PD+ N +M + K G IKE V M PD+
Sbjct: 302 SSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDV 361
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
++ ++++ Y + M +F ++ P + TFN +I Y + KA +F +
Sbjct: 362 FSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNE 421
Query: 351 MTAMKYTPSFITYECIIT---------------------------------MYGYCDNVS 377
M P +TY +I + G+C + S
Sbjct: 422 MRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGS 481
Query: 378 --RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+A+E+ E+ G + + +++ C G +A +F+ + N+G+ PD+ Y +
Sbjct: 482 LLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNM 541
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L Y E ++ M GI PN
Sbjct: 542 LMDGYCLVGKMEKALRVFDAMVSAGIEPN 570
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 138/308 (44%), Gaps = 13/308 (4%)
Query: 175 GCRPDPSVYNALITAHLHTRDKAKA--LAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
GC PD YN L+ + + +A L + + +G C P++V YN ++ +
Sbjct: 179 GCVPDVFSYNILLKSLCNQGKSGQADDLLRMMA-----EGGTVCSPDVVAYNTVIDGFFK 233
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+V++ LFKE+ + + PD+ TY+ V+ A K + + E+ L +M + PD T
Sbjct: 234 EGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWT 293
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM---IINYGKARLQGKAEYVFQ 349
+N LI Y + + +VFK + P + N++ + YGK + +A VF
Sbjct: 294 YNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIK---EARDVFD 350
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
M P +Y ++ Y + ++FD + G + T N +++AY G
Sbjct: 351 TMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCG 410
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFL 469
+ +A ++F + GV P TY + A + + + +M G+VP+K +
Sbjct: 411 MLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYH 470
Query: 470 EALETFSS 477
++ F +
Sbjct: 471 CLIQGFCT 478
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 143/344 (41%), Gaps = 6/344 (1%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
+ +W + + VF+ M++Q + D + L+ + K G+ + A +F M G PD
Sbjct: 304 TGQWKEAVRVFKEMRRQSI-LPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 362
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
Y ++ + L F M G + P+I T+N+L++A A +D+
Sbjct: 363 SYTIMLNGYA----TKGCLVDMTDLFDLMLG-DGIAPDIYTFNVLIKAYANCGMLDKAMI 417
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
+F E+ + + P + TY V+ A + G + + ++M PD ++ LI +
Sbjct: 418 IFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFC 477
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
+ K +++ +M++ + + F S+I N K A+ +F + P +
Sbjct: 478 THGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 537
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
Y ++ Y + +A +FD + G + V ++ YC G E LF
Sbjct: 538 VYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREM 597
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
G+ P + Y ++ +A + M ++GI NK
Sbjct: 598 LQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNK 641
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 139/335 (41%), Gaps = 5/335 (1%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E F + + D Y+ LI GQ + A+ +F EMR PD N L+ +
Sbjct: 276 EAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGS 335
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
K + +A F M M+ P++ +Y I+L A + + LF +
Sbjct: 336 LC----KYGKIKEARDVFDTM-AMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGD 390
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+APDIYT+N ++ AY GM+ + + + M+ + KP ++T+ +I + + D
Sbjct: 391 GIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDA 450
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
+ F ++ P ++ +I + KA+ + ++ + + II
Sbjct: 451 MEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINN 510
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
V A+ IFD +G N +++ YC+ G +A +F+ + G+ P+
Sbjct: 511 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 570
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y L Y K + L + M Q GI P+
Sbjct: 571 VVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS 605
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 135/324 (41%), Gaps = 11/324 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y +IA + + G+ AM F++M + G PD Y+ LI KA K L
Sbjct: 434 YMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKA--KELISE 491
Query: 208 QKMKGMERCKPNIVTYN-ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
GM + +IV + I+ C R +D N +F L PD YN +MD Y
Sbjct: 492 IMNNGM---RLDIVFFGSIINNLCKLGRVMDAQN-IFDLTVNVGLHPDAVVYNMLMDGYC 547
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
G +++ V M S +P+++ + L++ Y K D+ +F+ ++ KP+
Sbjct: 548 LVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTI 607
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFD 384
+N +I +A A+ F +MT + TY I + G N A +F
Sbjct: 608 LYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYS--IVLRGLFKNRCFDEAIFLFK 665
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
EL + + + TLN M+ EA LF + G+ P + TY ++ K
Sbjct: 666 ELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEG 725
Query: 445 MKELVQKLLKRMEQNGIVPNKRFF 468
+ E + + M+ G P+ R
Sbjct: 726 LVEEAEDMFSSMQNAGCEPDSRLL 749
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 135/332 (40%), Gaps = 40/332 (12%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
LF M G PD +N LI A+ + L KA+ F +M+ KP++VTY +
Sbjct: 383 LFDLMLGDGIAPDIYTFNVLIKAYAN----CGMLDKAMIIFNEMRD-HGVKPHVVTYMTV 437
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ- 285
+ A + +D F ++ + + PD Y Y+ ++ + +G + + + ++S + +N
Sbjct: 438 IAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGM 497
Query: 286 --------------CK--------------------PDIITFNLLIDSYGKRQAFDKMEQ 311
CK PD + +N+L+D Y +K +
Sbjct: 498 RLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALR 557
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
VF +++ + +P + + +++ Y K + +F++M PS I Y II
Sbjct: 558 VFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLF 617
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
A+ F E+++ G M T + +L N EA LF+ M V D
Sbjct: 618 EAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDII 677
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
T + + E + L + ++G+VP
Sbjct: 678 TLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 709
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 113/263 (42%), Gaps = 19/263 (7%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D + +I + K G+ A +F N G PD VYN L+ + + KA
Sbjct: 500 DIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLV----GKMEKA 555
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
L F M G+E PN+V Y L+ + +D+ +LF+E+ + + P YN +
Sbjct: 556 LRVFDAMVSAGIE---PNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 612
Query: 262 MDAYGKNGM-----IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+D + G +K E S + N+C T+++++ K + FD+ +FK L
Sbjct: 613 IDGLFEAGRTVPAKVKFHEMTESGIAMNKC-----TYSIVLRGLFKNRCFDEAIFLFKEL 667
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
K + T N+MI + R +A+ +F ++ P +TY +IT V
Sbjct: 668 RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLV 727
Query: 377 SRAREIFDELSKLGKDMKVSTLN 399
A ++F + G + LN
Sbjct: 728 EEAEDMFSSMQNAGCEPDSRLLN 750
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
++G+ D+ L +FR M Q+ T +Y+ +I + + G+T A F EM SG
Sbjct: 583 KIGRIDEGLS---LFREML-QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIA 638
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
+ Y+ ++ K + +A+ F++++ M K +I+T N ++ Q R V+
Sbjct: 639 MNKCTYSIVLRGLF----KNRCFDEAIFLFKELRAMN-VKIDIITLNTMIAGMFQTRRVE 693
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
+ LF + S L P TY+ ++ K G+++E E + S M++ C+PD
Sbjct: 694 EAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPD 745
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 10/200 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y L+ K G+ + LF EM G +P +YN +I A K
Sbjct: 574 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT 633
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ M +C TY+I+LR + R D+ LFKEL + DI T N ++ +
Sbjct: 634 ESGIAMNKC-----TYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQ 688
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
++E + + + + + P +T++++I + K ++ E +F S+ ++ +P
Sbjct: 689 TRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEP---- 744
Query: 328 FNSMIINYGKARLQGKAEYV 347
+S ++N+ L K E V
Sbjct: 745 -DSRLLNHVVRELLKKNEIV 763
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 163/373 (43%), Gaps = 32/373 (8%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ + + K + L + R M++ I + IYS +I + K G+ A LF+EM+
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQA 233
G PD YN++I + + A Q+M +ER P++VTYN L+ A +
Sbjct: 285 GIFPDLFTYNSMIVGFC----SSGRWSDAEQLLQEM--LERKISPDVVTYNALINAFVKE 338
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ L+ E+ + P+ TY+ ++D + K + E + M + C P++ITF
Sbjct: 339 GKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITF 398
Query: 294 NLLIDSY-GKRQAFDKMEQVFKSLMHSKEKPTL----PTFNSMIINYGKARLQGKAEYVF 348
N LID Y G ++ D ME L+H + L T+N++I + A +
Sbjct: 399 NTLIDGYCGAKRIDDGME-----LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLL 453
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDM-----------KV 395
Q+M + P +T C + G CDN + A E+F + K KD+ V
Sbjct: 454 QEMISSGLCPDIVT--CDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDV 511
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
T N ++ G EA+ L+E + G+ PD+ TY + K + + ++
Sbjct: 512 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDS 571
Query: 456 MEQNGIVPNKRFF 468
M PN F
Sbjct: 572 MGSKSFSPNVVTF 584
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 151/329 (45%), Gaps = 17/329 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ L+ + ++G+ A+ L M G +P Y ++ D AL
Sbjct: 187 FTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL----NLL 242
Query: 208 QKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+KM+ + PN+V Y+ ++ + C R+ D N LF E+ E + PD++TYN ++ +
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQN-LFTEMQEKGIFPDLFTYNSMIVGFC 301
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+G + E +L M + PD++T+N LI+++ K F + E+++ ++ P
Sbjct: 302 SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T++SMI + K AE++F M +P+ IT+ +I Y + E+ E+
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY-------KA 439
++ G +T N ++ + + G A L + + G+ PD T L K
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481
Query: 440 YTKANMKELVQKLLKRMEQ----NGIVPN 464
M +++QK K ++ NG+ P+
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPD 510
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 154/359 (42%), Gaps = 27/359 (7%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
S +W ++ + M +R D Y+ LI K+G+ A L+ EM G P+
Sbjct: 303 SGRWSDAEQLLQEML-ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
Y+++I +++ A A+ + Y KG C PN++T+N L+ A+ +D
Sbjct: 362 TYSSMIDGFCK-QNRLDA-AEHMFYLMATKG---CSPNLITFNTLIDGYCGAKRIDDGME 416
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
L E+ E+ L D TYN ++ + G + +L M S+ PDI+T + L+D
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLC 476
Query: 302 KRQAFDKMEQVFKSLMHSKE-----------KPTLPTFNSMI---INYGKARLQGKAEYV 347
++FK + SK+ +P + T+N +I IN GK +AE +
Sbjct: 477 DNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL---EAEEL 533
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+++M P ITY +I G C + A ++FD + V T ++ Y
Sbjct: 534 YEEMPHRGIVPDTITYSSMID--GLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 591
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
C G + LF G+ ++ TY L + K + + M +G+ P+
Sbjct: 592 CKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 143/314 (45%), Gaps = 8/314 (2%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME-RCKPNIVT 222
A+ LFS+M S RP PSV + + R + L +L +QKM+ + RC +I +
Sbjct: 63 AIDLFSDMLRS--RPLPSVVDFCKLMGVVVRMERPDLVISL--YQKMERKQIRC--DIYS 116
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
+ IL++ + + F +L + L PD+ T+N ++ + E ++ +M
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
C+P+++TF L++ + + + +M +PT T+ +++ K
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236
Query: 343 KAEYVFQKMTAMKYT-PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
A + +KM + + P+ + Y II S A+ +F E+ + G + T N+M
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ +C +G ++A+ L + ++PD TY L A+ K ++L M GI
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356
Query: 462 VPNKRFFLEALETF 475
+PN + ++ F
Sbjct: 357 IPNTITYSSMIDGF 370
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 113/280 (40%), Gaps = 22/280 (7%)
Query: 140 WYIADTGIYSKLIA----VMGKKGQTRL--AMWLFSEMRNSGCRPDPSVYNALITAHLHT 193
+ +A G LI + G G R+ M L EM +G D + YN LI
Sbjct: 384 YLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLV 443
Query: 194 RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES---- 249
D L AL Q+M C P+IVT + LL + +FK + +S
Sbjct: 444 GD----LNAALDLLQEMISSGLC-PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDL 498
Query: 250 -------ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
+ PD+ TYN ++ G E E + M PD IT++ +ID K
Sbjct: 499 DASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCK 558
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ D+ Q+F S+ P + TF ++I Y KA +F +M + IT
Sbjct: 559 QSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAIT 618
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
Y +I + N++ A +IF E+ G T+ ML
Sbjct: 619 YITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 658
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 88/204 (43%), Gaps = 16/204 (7%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYI----------ADTGIYSKLIAVMGKKGQT 161
C L + L + K LE+F+ MQK + + D Y+ LI+ + +G+
Sbjct: 468 CDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKF 527
Query: 162 RLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV 221
A L+ EM + G PD Y+++I K L +A F M G + PN+V
Sbjct: 528 LEAEELYEEMPHRGIVPDTITYSSMIDGLC----KQSRLDEATQMFDSM-GSKSFSPNVV 582
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
T+ L+ +A VD LF E+ + + TY ++ + K G I + M
Sbjct: 583 TFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEM 642
Query: 282 KSNQCKPDIITF-NLLIDSYGKRQ 304
S+ PD IT N+L + K +
Sbjct: 643 ISSGVYPDTITIRNMLTGLWSKEE 666
>gi|167998294|ref|XP_001751853.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696951|gb|EDQ83288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 657
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 177/412 (42%), Gaps = 36/412 (8%)
Query: 87 MRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTG 146
MR++ + R + C L LG + + L++FRWM+KQ +
Sbjct: 186 MRNWDAASRVFRAFRSASVEPNAHVCTTLIAVLGYGRRLPEALKLFRWMEKQG---IERP 242
Query: 147 IYS--KLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRD--------- 195
IY+ L+ G+ G A+ LF EM+ G PD + L++A
Sbjct: 243 IYTFNALMVACGRCGAGDTAVELFEEMKELGLAPDNITFRGLVSATTAAGKWKAAQSFIN 302
Query: 196 --KAKALAKALGYFQKMK-------------GM------ERCKPNIVTYNILLRACAQAR 234
+A + A+G F +M+ G+ + C+P + YN LL A +
Sbjct: 303 LMQAGGFSFAIGEFTEMQWACARARNSRESLGLLQAMIEQGCEPRLENYNALLCAYEKTA 362
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
N ++ + E PD T++ ++ A G ++ +V+ +MK N P+++++
Sbjct: 363 NWEEAVRTVVWIQEKGFTPDFITWSSLLGACANAGQAEKAVAVMEKMKENNFTPNVVSWC 422
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
L+ +Y K ++K E++F S+++S P +NS++ Y K R + Y +K +
Sbjct: 423 YLLKAYQKTGNWEKTEEIFHSMLNSGCPPNEVAWNSLLSAYEKGRQWKRVLYTIEKQEEL 482
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ + I+ A + ++ + G + T +++++AY GL +A
Sbjct: 483 GVKLDVVAWSTTISALAKAGQWQLAEKKIRQMKQSGCQPNIVTYSSLIKAYGDVGLWNKA 542
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR-MEQNGIVPNK 465
+ +F++ G+ PDS L +AY K + V M + GI P+K
Sbjct: 543 ESVFKSMLLEGIRPDSKACCALLRAYAKGRQLDKVMFFFDSMMPRYGIKPDK 594
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 6/174 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +S I+ + K GQ +LA +M+ SGC+P+ Y++LI A+ KA
Sbjct: 487 DVVAWSTTISALAKAGQWQLAEKKIRQMKQSGCQPNIVTYSSLIKAY----GDVGLWNKA 542
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI-LAPDIYTYNGVM 262
F+ M +E +P+ LLRA A+ R +D+V F + + PD Y Y +
Sbjct: 543 ESVFKSML-LEGIRPDSKACCALLRAYAKGRQLDKVMFFFDSMMPRYGIKPDKYAYAAIF 601
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
A G + + M++ C PD + + LI Y DK ++ K +
Sbjct: 602 WACWTCGEWQRAADYMENMEAAGCTPDTMIYTTLITMYEAHGQVDKAMEILKKM 655
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 99/249 (39%), Gaps = 6/249 (2%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
++ + N+++ Q RN D + +F+ + + P+ + ++ G + E +
Sbjct: 172 DVRSMNVVVWQLGQMRNWDAASRVFRAFRSASVEPNAHVCTTLIAVLGYGRRLPEALKLF 231
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
M+ + I TFN L+ + G+ A D ++F+ + P TF ++ A
Sbjct: 232 RWMEKQGIERPIYTFNALMVACGRCGAGDTAVELFEEMKELGLAPDNITFRGLVSATTAA 291
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE---IFDELSKLGKDMKV 395
A+ M A + SF E M C +RE + + + G + ++
Sbjct: 292 GKWKAAQSFINLMQAGGF--SFAIGE-FTEMQWACARARNSRESLGLLQAMIEQGCEPRL 348
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
NA+L AY EA G TPD T+ L A A E ++++
Sbjct: 349 ENYNALLCAYEKTANWEEAVRTVVWIQEKGFTPDFITWSSLLGACANAGQAEKAVAVMEK 408
Query: 456 MEQNGIVPN 464
M++N PN
Sbjct: 409 MKENNFTPN 417
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 65/152 (42%)
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
E + + + + + + N ++ G+ R A VF+ + P+ +I +
Sbjct: 158 EDIMGVVHETGLRVDVRSMNVVVWQLGQMRNWDAASRVFRAFRSASVEPNAHVCTTLIAV 217
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
GY + A ++F + K G + + T NA++ A G A LFE +G+ PD
Sbjct: 218 LGYGRRLPEALKLFRWMEKQGIERPIYTFNALMVACGRCGAGDTAVELFEEMKELGLAPD 277
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ T++ L A T A + Q + M+ G
Sbjct: 278 NITFRGLVSATTAAGKWKAAQSFINLMQAGGF 309
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 146/318 (45%), Gaps = 9/318 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I + K G T A+ L +M GC+PD YN +I + R +A+ +F
Sbjct: 179 YTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMY----FF 234
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M + PN+VTY+ +L +++ +LFK++ + P+ T+ ++D K
Sbjct: 235 SEMVD-QGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCK 293
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
GMI E V M N +PD T++ L+D Y + D+ +++F ++ P++
Sbjct: 294 EGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRV 353
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRAREIFDE 385
+N +I + K+R +A+ + +M TP +TY + M G+C A+++F E
Sbjct: 354 YNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTL--MQGFCQAGRPQVAQKLFKE 411
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ G T + +L+ C +G EA L + + P Y +L +
Sbjct: 412 MCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGK 471
Query: 446 KELVQKLLKRMEQNGIVP 463
E ++L + GI P
Sbjct: 472 LEAARELFSNLFVKGIQP 489
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 104/464 (22%), Positives = 193/464 (41%), Gaps = 43/464 (9%)
Query: 16 LSSSSASSSSSSSSSSFNQSSSQNYNFTHRHIP--------LSLRTRPRTGICCVWTRPR 67
++S+AS+++ S SS N NYN H L +R P V+ +
Sbjct: 20 FTTSTASTTNISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPV---VVFNKLL 76
Query: 68 SKRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVV---RSEHCFLLFEELGKSDK 124
+K L + + S+ P V TL + + +H F LGK K
Sbjct: 77 GSLVKKKHYSTVISLCKQM--DLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFK 134
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
+ Q ++ + L+ + K + A+ LF E+ G P Y
Sbjct: 135 ----------LGLQPTHVT----FGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYT 180
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMER--CKPNIVTYNILLRACAQARNVDQVNAL 242
+I AL Q +K ME CKP++V YN ++ + + R ++
Sbjct: 181 TIIKGLCKIGHTTNAL-------QLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYF 233
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
F E+ + + P++ TY+ ++ + G + E S+ +M P+ +TF +L+D K
Sbjct: 234 FSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCK 293
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ +VF+ + + +P T+++++ Y +A+ +F M + PS
Sbjct: 294 EGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRV 353
Query: 363 YECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
Y +I G+C + ++ A+ + E+ T + +++ +C G P A LF+
Sbjct: 354 YNILIN--GHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKE 411
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ G+ PDS TY +L K + +LLK M+++ I P+
Sbjct: 412 MCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPH 455
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 163/361 (45%), Gaps = 15/361 (4%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
++G + LQ L+ +++ D Y+ +I + K + AM+ FSEM + G
Sbjct: 188 KIGHTTNALQLLK----KMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIP 243
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
P+ Y+++ LH L +A F++M G PN VT+ IL+ + +
Sbjct: 244 PNVVTYSSI----LHGFCNLGQLNEATSLFKQMIG-RNVMPNTVTFTILVDGLCKEGMIL 298
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ +F+ + E+ + PD YTY+ +MD Y + E + + M P + +N+LI
Sbjct: 299 EARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILI 358
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+ + K + ++ + + + P T+++++ + +A A+ +F++M +
Sbjct: 359 NGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLL 418
Query: 358 PSFITYECI---ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P ITY + + +G+ D R + E SK+ + + N +++ C G A
Sbjct: 419 PDSITYSILLDGLCKHGHLDEAFRLLKAMQE-SKI--EPHICIYNILIQGMCNFGKLEAA 475
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
LF N G+ P TY ++ K + ++ ++M NG +PN + A++
Sbjct: 476 RELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQG 535
Query: 475 F 475
F
Sbjct: 536 F 536
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 119/295 (40%), Gaps = 31/295 (10%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K L+ VF M + D YS L+ + Q A LF M
Sbjct: 286 ILVDGLCKEGMILEARRVFEMM-TENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVG 344
Query: 174 SGCRPDPSVYNALITAHLHTR--DKAKAL----------AKALGYFQKMKGM-------- 213
G P VYN LI H +R ++AK L + Y M+G
Sbjct: 345 KGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQV 404
Query: 214 ------ERCK----PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
E C P+ +TY+ILL + ++D+ L K + ES + P I YN ++
Sbjct: 405 AQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQ 464
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
G ++ + S + +P ++T+ ++I K ++ ++F+ ++ + P
Sbjct: 465 GMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLP 524
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
T+N I + + A + ++M ++ T++ ++ + + +SR
Sbjct: 525 NSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLDLESNDEIISR 579
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 95/236 (40%), Gaps = 15/236 (6%)
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
++P T G Y + + + +++ + P ++ FN L+ S K++ + +
Sbjct: 30 ISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVI 89
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ---KMTAMKYTPSFITYECII 367
+ K + S +P + T +++IN + + F KM + P+ +T+ ++
Sbjct: 90 SLCKQMDLSNIRPNVYTL-TILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLL 148
Query: 368 TMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
G C + A ++FDE+ K+G + T +++ C G T A L + G
Sbjct: 149 N--GLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKG 206
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
PD Y + + K M GI PN + T+SS L G
Sbjct: 207 CKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPN-------VVTYSSILHG 255
>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
Length = 609
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 151/328 (46%), Gaps = 10/328 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D+ + + +I + G + AM +F +M SGC+P S +N LI + R +++
Sbjct: 126 DSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMK-- 183
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ M KPN TYNIL+ A + +++ + + ++ S + PD+ TYN +
Sbjct: 184 --LLELMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLAR 241
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
AY ++G + ES++ M + + P+ T +++ Y ++ + +V + P
Sbjct: 242 AYAQDGETNKAESIIVDMLNKKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHP 301
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT---PSFITYECIITMYGYCDNVSRAR 380
L FNS+I + G ++ V + +T M+ + P IT+ I+ + + + +
Sbjct: 302 NLVIFNSLIKGFLDI---GDSDGVDKALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQ 358
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
EIFD++ K G + + + + + + G P +A+ L GV P+ + + +
Sbjct: 359 EIFDDMLKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNFMSKYGVRPNVVIFTTIISGW 418
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFF 468
A E K+ + M + PN + F
Sbjct: 419 CTAGKMEKAWKVFEHMCDMDVSPNLKTF 446
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 154/328 (46%), Gaps = 12/328 (3%)
Query: 145 TGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKAL 204
T Y+ L+A + ++ + + L SEM +G +PD + NA+I A ++ + +A+
Sbjct: 92 TVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILLNAIINAF----SESGNVKEAM 147
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI-LAPDIYTYNGVMD 263
FQKM+ CKP T+N L++ R ++ L + + + L P+ TYN ++
Sbjct: 148 EIFQKME-ESGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTTNLKPNNRTYNILVG 206
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
A K IKE +V+ +M ++ +PD++T+N L +Y + +K E + +++ K P
Sbjct: 207 ALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLNKKVNP 266
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY---GYCDNVSRAR 380
T ++ Y + +A V +M + P+ + + +I + G D V +A
Sbjct: 267 NERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKAL 326
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ +E G V T + ++ + G + +F++ G+ PD + +L K +
Sbjct: 327 TMMEE---SGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAKGF 383
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFF 468
+A + LL M + G+ PN F
Sbjct: 384 VRAGEPVKAESLLNFMSKYGVRPNVVIF 411
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 155/323 (47%), Gaps = 10/323 (3%)
Query: 149 SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQ 208
+KL+ ++ ++G+ + A ++F+ + G RP Y AL+ A L + + KA++ L +
Sbjct: 61 TKLMNILVERGKPQEAQFIFNSLVEQGHRPTTVTYTALVAA-LTRQKRFKAISGLLSEME 119
Query: 209 KMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
+ KP+ + N ++ A +++ NV + +F+++ ES P T+N ++ YG
Sbjct: 120 ETG----IKPDSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGII 175
Query: 269 GMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+E +L M ++ KP+ T+N+L+ + K+++ + V ++ S +P + T
Sbjct: 176 RKPEESMKLLELMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASGVQPDVVT 235
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRAREIFDE 385
+N++ Y + KAE + M K P+ T C I + GYC+ N++ A +
Sbjct: 236 YNTLARAYAQDGETNKAESIIVDMLNKKVNPNERT--CGIIVGGYCEQGNLAEALRVVYR 293
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ LG + N++++ + G D GV PD T+ + ++ A
Sbjct: 294 MRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALTMMEESGVKPDVITFSTIMNGWSSAGR 353
Query: 446 KELVQKLLKRMEQNGIVPNKRFF 468
+ Q++ M ++GI P+ F
Sbjct: 354 MDKCQEIFDDMLKSGIEPDIHVF 376
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 143/314 (45%), Gaps = 7/314 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + KK + A + +M SG +PD YN L A+ + KA + +
Sbjct: 201 YNILVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDML 260
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K + PN T I++ + N+ + + + + + P++ +N ++ +
Sbjct: 261 NK-----KVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLD 315
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G ++ L+ M+ + KPD+ITF+ +++ + DK +++F ++ S +P +
Sbjct: 316 IGDSDGVDKALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHV 375
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
F+ + + +A KAE + M+ P+ + + II+ + + +A ++F+ +
Sbjct: 376 FSILAKGFVRAGEPVKAESLLNFMSKYGVRPNVVIFTTIISGWCTAGKMEKAWKVFEHMC 435
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ + T ++ Y P A+ + + M V P++ST KL+ +A+ M
Sbjct: 436 DMDVSPNLKTFETLIWGYGEAKQPWRAEEILQMMEEMNVVPENSTLKLVSEAWRSIGMVN 495
Query: 448 LVQKLLKRMEQNGI 461
+ +R E+N I
Sbjct: 496 DAKA--ERTEENEI 507
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 119/263 (45%), Gaps = 1/263 (0%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+P VTY L+ A + + ++ L E+ E+ + PD N +++A+ ++G +KE
Sbjct: 89 RPTTVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILLNAIINAFSESGNVKEAME 148
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYG-KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
+ +M+ + CKP TFN LI YG R+ + M+ + + KP T+N ++
Sbjct: 149 IFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTTNLKPNNRTYNILVGAL 208
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
K + +A V +M A P +TY + Y ++A I ++ +
Sbjct: 209 CKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLNKKVNPNE 268
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
T ++ YC G EA + ++G+ P+ + L K + + V K L
Sbjct: 269 RTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALTM 328
Query: 456 MEQNGIVPNKRFFLEALETFSSS 478
ME++G+ P+ F + +SS+
Sbjct: 329 MEESGVKPDVITFSTIMNGWSSA 351
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 31/70 (44%)
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G P EA +F + G P + TY L A T+ + + LL ME+ GI P+
Sbjct: 71 GKPQEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILL 130
Query: 469 LEALETFSSS 478
+ FS S
Sbjct: 131 NAIINAFSES 140
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 150/315 (47%), Gaps = 9/315 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y L+ + K G+TR A+ L + + RPD +YN +I K K + +A ++
Sbjct: 240 YGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLC----KDKLVNEAYDFY 295
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M P+++TY+ L+ A + +L E+ + PD+YTY ++DA K
Sbjct: 296 TEMNS-RGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCK 354
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G +KE +++L M KP+++T++ L+D Y +Q+F +++ ++ P++ +
Sbjct: 355 EGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCS 414
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDE 385
+N MI K + +A + ++M P+ +TY +I G C + ++ A ++ E
Sbjct: 415 YNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLID--GLCKSGRITSALDLMKE 472
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
L G+ V T ++L+ C N +A LF G+ P+ TY L K
Sbjct: 473 LHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGAR 532
Query: 446 KELVQKLLKRMEQNG 460
+ QKL + + G
Sbjct: 533 LKNAQKLFQHILVKG 547
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 141/334 (42%), Gaps = 9/334 (2%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
R D YS LI GQ A L +EM PD Y LI A L K K
Sbjct: 301 RGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDA-LCKEGKLK 359
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
LG K E KPN+VTY+ L+ V +F + ++ + P + +Y
Sbjct: 360 EAKNLLGVMTK----EGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSY 415
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N +++ K + E ++L M P+ +T+N LID K + K L H
Sbjct: 416 NIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHH 475
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--V 376
+ + T+ S++ K + KA +F KM P+ TY +I G C +
Sbjct: 476 RGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALID--GLCKGARL 533
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
A+++F + G + V T N M+ C G+ EA + + G PD+ T++++
Sbjct: 534 KNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEII 593
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
++ + + + +KLL M G++ + F E
Sbjct: 594 IRSLFEKDENDKAEKLLHEMIAKGLLHFRNFHGE 627
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 141/327 (43%), Gaps = 9/327 (2%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
Y +T I + L+ + KG+ + ++ ++ G + + Y L+ L + +
Sbjct: 198 YQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNG-LCKIGETRCA 256
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
K L +M +P++V YN ++ + + V++ + E++ + PD+ TY+
Sbjct: 257 IKLL----RMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYST 312
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ + G + S+L+ M PD+ T+ +LID+ K + + + +
Sbjct: 313 LICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEG 372
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSR 378
KP + T+++++ Y A+ +F M + PS +Y +I G C +V
Sbjct: 373 VKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMIN--GLCKGKSVDE 430
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A + E+ T N++++ C +G T A L + H+ G D TY L
Sbjct: 431 AMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLD 490
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNK 465
K + L +M++ GI PNK
Sbjct: 491 GLCKNQNLDKAIALFMKMKERGIQPNK 517
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 132/317 (41%), Gaps = 25/317 (7%)
Query: 161 TRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA--KALAKALGYFQKMKGMERCKP 218
TR MWL S + +S P + N + H++ + + A+ F M M R P
Sbjct: 72 TRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQFNGMLLM-RNTP 130
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
+I+ + +L + + ++ +L K++ + PD+ T + +++ + G + SVL
Sbjct: 131 SIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVL 190
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
++ +P+ I L+ + +V KSL H +K F ++YG
Sbjct: 191 GKILKLGYQPNTIILTTLMKGLCLKG------EVKKSL-HFHDKVVAQGFQMNQVSYG-T 242
Query: 339 RLQGKAEYVFQKMTAMKYT---------PSFITYECIITMYGYCDN--VSRAREIFDELS 387
L G + + + A+K P + Y II G C + V+ A + + E++
Sbjct: 243 LLNGLCK-IGETRCAIKLLRMIEDRSTRPDVVMYNTIID--GLCKDKLVNEAYDFYTEMN 299
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G V T + ++ +C+ G A L + PD TY +L A K +
Sbjct: 300 SRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLK 359
Query: 448 LVQKLLKRMEQNGIVPN 464
+ LL M + G+ PN
Sbjct: 360 EAKNLLGVMTKEGVKPN 376
>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 529
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 156/339 (46%), Gaps = 31/339 (9%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + K GQTR A+ + +PD +YN +I K K + A +
Sbjct: 120 YGTLINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLC----KDKLVNDAFNLY 175
Query: 208 QKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+M C P++VTYN L+ C A+ D + L K + E I P +YT++ ++DA+
Sbjct: 176 FEMVAKRIC-PSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDI-NPTVYTFSILIDAFC 233
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL---------- 316
K G +KE ++V + M KP+I+T+N L+D + K + +F ++
Sbjct: 234 KEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNL 293
Query: 317 ---MHSKE-KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY---TPSFITYECIITM 369
MH K+ P + +NS+I K+ G+ Y + + M Y P TY ++
Sbjct: 294 FEEMHFKQIYPDMVIYNSLIDGLCKS---GRTPYALKFIGEMHYRGQPPDIFTYNSLLD- 349
Query: 370 YGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
C N V +A E+ +L G V T N ++ C +G +A+ +FE+ G
Sbjct: 350 -ALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKGYN 408
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
D TY + K + K + + ++ +M+ +G P+ +
Sbjct: 409 TDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAK 447
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 145/339 (42%), Gaps = 23/339 (6%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
++ Y +D ++ LI + KG+ A+ ++ G + + Y LI K
Sbjct: 75 KKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLC----KV 130
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
AL + +++ G + +P++V YN ++ + + V+ L+ E+ + P + T
Sbjct: 131 GQTRAALEFLRRIDG-KLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVT 189
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN ++ +K+ +L +M P + TF++LID++ K + + VF +M
Sbjct: 190 YNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMM 249
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM--------------KYTPSFITY 363
KP + T+NS++ + + KA+ +F M M + P + Y
Sbjct: 250 KEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIY 309
Query: 364 ECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
+I G C + A + E+ G+ + T N++L+A C N +A L
Sbjct: 310 NSLID--GLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKL 367
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+ G+ P TY +L K+ + +K+ + + G
Sbjct: 368 KDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLLVKG 406
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 110/230 (47%), Gaps = 11/230 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH--LHTRDKAKAL----- 200
+S LI K+G+ + A +F+ M +P+ YN+L+ H ++ KAK++
Sbjct: 225 FSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMI 284
Query: 201 ---AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+A+ F++M ++ P++V YN L+ ++ E+H PDI+T
Sbjct: 285 KMVDEAMNLFEEMH-FKQIYPDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFT 343
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN ++DA KN + + +L+++K +P + T+N+LI+ K E+VF+ L+
Sbjct: 344 YNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILINGLCKSGRLKDAEKVFEDLL 403
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
+ T+N+MI + K L + + KM +P E II
Sbjct: 404 VKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIII 453
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 11/185 (5%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ + +F M ++ Y D IY+ LI + K G+T A+ EM G PD YN+L
Sbjct: 289 EAMNLFEEMHFKQIY-PDMVIYNSLIDGLCKSGRTPYALKFIGEMHYRGQPPDIFTYNSL 347
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
+ A K + KA+ K+K + +P++ TYNIL+ ++ + +F++L
Sbjct: 348 LDALC----KNYHVDKAIELLTKLKD-QGIQPSVCTYNILINGLCKSGRLKDAEKVFEDL 402
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
D+YTYN ++ + K G+ E +++S+MK + C PD ++I R F
Sbjct: 403 LVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMKDSGCSPDAKNCEIII-----RSLF 457
Query: 307 DKMEQ 311
DK E
Sbjct: 458 DKGEN 462
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 171/380 (45%), Gaps = 19/380 (5%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ + L K+ K+ E+F QR ++ Y LI +GKKG A LF M +
Sbjct: 431 IMVDRLCKAKKFEPAYEMFE-TASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLD 489
Query: 174 SGCRPDPSVYNALI-TAHLHTRDKAKALAKALGYFQKMKGMER--CKPNIVTYNILLRAC 230
+G +P VY +LI +H R K G+ + K M R C+P++ N +
Sbjct: 490 TGHNANPVVYTSLIRNFFMHGR-------KEDGH-KIFKEMNRRGCQPDLTLLNTYMDCV 541
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
+A +V++ A+F+++ PD+ +Y+ ++ K G +E S+ MK D
Sbjct: 542 FKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDA 601
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
+N ++D + K DK +V + + + PT+ T+ S+I K +A +F++
Sbjct: 602 RAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEE 661
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
+ + I Y +I +G + A I +E+ K G V T N++++A
Sbjct: 662 AKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEE 721
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
EA + F++ M +P++ TY +L + + M++ G+VPN
Sbjct: 722 INEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPN------ 775
Query: 471 ALETFSSSLAGSQSGSAKTD 490
+ T+++ +AG TD
Sbjct: 776 -VVTYTTMIAGLAKVGNITD 794
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 140/313 (44%), Gaps = 9/313 (2%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K ++ D YS LI + K GQ R +F M+ G D YNA++ K
Sbjct: 558 KGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFC----K 613
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+ L KA ++MK ++R P + TY ++ A+ +D+ LF+E + ++
Sbjct: 614 SGKLDKAYEVLEEMK-VKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVI 672
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
Y+ ++D +GK G I E +L M P++ T+N L+D+ K + ++ F+S+
Sbjct: 673 VYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSM 732
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQ--GKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
K P T+ S++IN G R+Q KA +Q+M P+ +TY +I
Sbjct: 733 KEMKCSPNTYTY-SILIN-GLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVG 790
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
N++ A +F+ G ++ NA++E EA +FE + G +
Sbjct: 791 NITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACI 850
Query: 435 LLYKAYTKANMKE 447
L A KA E
Sbjct: 851 SLLDALNKAECLE 863
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 153/341 (44%), Gaps = 13/341 (3%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ LE+ R MQ+ + + +++ L+ + ++G+ A+ L E++ S PD +YN
Sbjct: 200 RALELLRQMQEVGYEVG-VPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVC 258
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I KA + A +F ++K + KP+ V+Y ++ +A + + LF ++
Sbjct: 259 IDCF----GKAGNVDMAWKFFHELKS-QGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQM 313
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
P Y YN ++ YG G + +L ++K C P +++FN ++ GK++
Sbjct: 314 ETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKV 373
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT---PSFITY 363
D+ +F++ M +P T+N +I A GK E + M++ P+ +T
Sbjct: 374 DEALTLFEA-MKKDAEPNSSTYNIIIDMLCMA---GKVEEAYMIRDEMEHAGLFPNLLTV 429
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
++ A E+F+ S+ G + T ++++ G +A LFEN +
Sbjct: 430 NIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLD 489
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G + Y L + + KE K+ K M + G P+
Sbjct: 490 TGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPD 530
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 157/375 (41%), Gaps = 14/375 (3%)
Query: 106 VVRSEHCFLLFEELGKSD-KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLA 164
+V C F + G D W + F ++ Q D Y+ +I V+ K G+ A
Sbjct: 252 IVLYNVCIDCFGKAGNVDMAW----KFFHELKSQGLKPDDVS-YTSMIWVLCKAGRLSEA 306
Query: 165 MWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTY 223
LF +M P YN +I + A A ++K ER C P++V++
Sbjct: 307 EELFGQMETERAVPCAYAYNTMIMGY----GSAGQFENAYKLLDQLK--ERGCIPSVVSF 360
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
N +L + R VD+ LF+ + + P+ TYN ++D G ++E + M+
Sbjct: 361 NSILTCLGKKRKVDEALTLFEAMKKDA-EPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEH 419
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
P+++T N+++D K + F+ ++F++ P T+ S+I GK
Sbjct: 420 AGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDD 479
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A +F+ M + + + Y +I + +IF E+++ G ++ LN ++
Sbjct: 480 AYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMD 539
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
G + +FE+ G PD +Y +L TKA + M+Q G
Sbjct: 540 CVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFAL 599
Query: 464 NKRFFLEALETFSSS 478
+ R + ++ F S
Sbjct: 600 DARAYNAVVDGFCKS 614
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 132/289 (45%), Gaps = 11/289 (3%)
Query: 178 PDPSVYNALITAHLHTR--DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
P+P+ + L++A + TR D A+ + A+ +++K +P Y +L+ A A+AR
Sbjct: 146 PNPACAD-LVSALVRTRRLDDAERVIAAM---RRLK----FRPAFSAYTVLIGAMAEARQ 197
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
++ L +++ E + + ++ A + G ++ +++ +K + +PDI+ +N+
Sbjct: 198 PERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNV 257
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
ID +GK D + F L KP ++ SMI KA +AE +F +M +
Sbjct: 258 CIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETER 317
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
P Y +I YG A ++ D+L + G V + N++L EA
Sbjct: 318 AVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEAL 377
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
LFE + P+SSTY ++ A E + ME G+ PN
Sbjct: 378 TLFE-AMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPN 425
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 161/393 (40%), Gaps = 42/393 (10%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L K+ + + E+F M+ +R + Y+ +I G GQ A L +++ GC P
Sbjct: 297 LCKAGRLSEAEELFGQMETER-AVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIP 355
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
+N+++T K + + +AL F+ MK + +PN TYNI++ A V++
Sbjct: 356 SVVSFNSILTC----LGKKRKVDEALTLFEAMK--KDAEPNSSTYNIIIDMLCMAGKVEE 409
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+ E+ + L P++ T N ++D K + + C P+ +T+ LID
Sbjct: 410 AYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLID 469
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
GK+ D ++F++++ + + S+I N+ + +F++M P
Sbjct: 470 GLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQP 529
Query: 359 SFI---TY-ECI---------------ITMYGYCDNV-------------SRARE---IF 383
TY +C+ I YG+ +V +ARE IF
Sbjct: 530 DLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIF 589
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ + G + NA+++ +C +G +A + E V P +TY + K
Sbjct: 590 HAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKI 649
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+ + L + + GI N + ++ F
Sbjct: 650 DRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFG 682
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 128/348 (36%), Gaps = 80/348 (22%)
Query: 3 LTNLSPYSLRLSTLSSSSASSSSSSSSSSFNQSSSQNYNFTHRHIPLSLRTRPRTGICCV 62
L ++ YS+ + L+ + + +SS F+ Q + R + G C
Sbjct: 563 LPDVRSYSILIHGLTKAG---QARETSSIFHAMKQQGFALDARAYNAVV-----DGFC-- 612
Query: 63 WTRPRSKRGRKSEELESKELVRVLMRSFSDKEPLVRT----LNKYVKVVRSEHCFLLFEE 118
K + E LE ++ RV P V T ++ K+ R + ++LFEE
Sbjct: 613 ---KSGKLDKAYEVLEEMKVKRV--------PPTVATYGSIIDGLAKIDRLDEAYMLFEE 661
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
K + + +YS LI GK G+ A + EM G P
Sbjct: 662 -----------------AKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTP 704
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME--------------RCK------- 217
+ +N+L+ A + KA+ + +AL FQ MK M+ C+
Sbjct: 705 NVYTWNSLMDALV----KAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKA 760
Query: 218 -------------PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
PN+VTY ++ A+ N+ +LF+ + PD ++N +++
Sbjct: 761 FVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEG 820
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
E V + C+ ++ L+D+ K + ++ V
Sbjct: 821 MSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQAAVV 868
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 154/333 (46%), Gaps = 16/333 (4%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L EL ++ L++F WM+ +A+T Y+++I + G AM LF +M
Sbjct: 379 LINELCVGGRFSTALKIFHWMEGH-GSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKM 437
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P YN LI +L T+ A+ L ++ C+P+ TYN L+ ++
Sbjct: 438 GPLPTVVTYNTLINGYL-TKGNVNNAARLLDLMKE----NGCEPDEWTYNELVSGFSKWG 492
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
++ + F+E+ E L P+ +Y ++D + K+G + S+L RM+ C P++ ++N
Sbjct: 493 KLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYN 552
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY---VFQKM 351
+I+ K F + E++ ++ P + T+ ++I G R G+ ++ +F M
Sbjct: 553 AVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLI--DGLCR-NGRTQFAFKIFHDM 609
Query: 352 TAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
K P+ TY +I YG C A + E+ + G T ++++ + + G
Sbjct: 610 EKRKCLPNLYTYSSLI--YGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLG 667
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
A LL +MG P+ TY +L K K
Sbjct: 668 RIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQK 700
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 146/352 (41%), Gaps = 40/352 (11%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ LI ++ KKG+ R A + S++ PD Y +LI H R+ L A G F
Sbjct: 201 FNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRN----LDLAFGVF 256
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M E C PN VTY+ L+ VD+ + +E+ E + P +YTY + A
Sbjct: 257 DRMVK-EGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCA 315
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+E +++RMK C+P++ T+ LI + + ++ ++ P T
Sbjct: 316 IEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVT 375
Query: 328 FNSMIINY-----------------GKARLQG------------------KAEYVFQKMT 352
+N++I G L KA +F+KM
Sbjct: 376 YNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML 435
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
M P+ +TY +I Y NV+ A + D + + G + T N ++ + G
Sbjct: 436 KMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLE 495
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A F+ G+ P+ +Y L ++K ++ LLKRME+ G PN
Sbjct: 496 SASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPN 547
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 149/339 (43%), Gaps = 5/339 (1%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+R + Y+ LI+ + + G+ +A+ L+ +M G P+ YNALI
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC----V 385
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+ AL F M+G N TYN +++ ++++ LF+++ + P +
Sbjct: 386 GGRFSTALKIFHWMEG-HGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVV 444
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TYN +++ Y G + +L MK N C+PD T+N L+ + K + F+ +
Sbjct: 445 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM 504
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+ P ++ ++I + K A + ++M M P+ +Y +I +
Sbjct: 505 VECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRF 564
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
S A +I D++ + G V T +++ C NG A +F + P+ TY L
Sbjct: 565 SEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL 624
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ + + LLK ME+ G+ P++ F ++ F
Sbjct: 625 IYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGF 663
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 125/297 (42%), Gaps = 39/297 (13%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+P+++T+N L+ ++ V + + ++ + L+PD++TY ++ + +N +
Sbjct: 195 QPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFG 254
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI---- 332
V RM C P+ +T++ LI+ D+ + + ++ +PT+ T+ I
Sbjct: 255 VFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 314
Query: 333 -----------------------------INYGKARLQGKAEY---VFQKMTAMKYTPSF 360
+ G +RL GK E ++ KM P+
Sbjct: 315 AIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRL-GKLEVAIGLYHKMLKEGLVPNT 373
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
+TY +I S A +IF + G T N +++ C+ G +A +LFE
Sbjct: 374 VTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEK 433
Query: 421 SHNMGVTPDSSTYKLLYKAY-TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
MG P TY L Y TK N+ +LL M++NG P++ + E + FS
Sbjct: 434 MLKMGPLPTVVTYNTLINGYLTKGNVNN-AARLLDLMKENGCEPDEWTYNELVSGFS 489
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 106/242 (43%), Gaps = 4/242 (1%)
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
++++AC + +V E+ +Y+ N ++ K M++ ++ +M ++
Sbjct: 133 LMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 192
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
+P ++TFN LI+ K+ + E + + P + T+ S+I+ + + R A
Sbjct: 193 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 252
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAML 402
VF +M P+ +TY +I G C+ V A ++ +E+ + G + V T +
Sbjct: 253 FGVFDRMVKEGCDPNSVTYSTLIN--GLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPI 310
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
A C EA L G P+ TY L ++ E+ L +M + G+V
Sbjct: 311 TALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLV 370
Query: 463 PN 464
PN
Sbjct: 371 PN 372
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 105/250 (42%)
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
N LL A+ V+ L+K++ S + P + T+N +++ K G ++E E +LS++
Sbjct: 167 NTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ 226
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
PD+ T+ LI + + + D VF ++ P T++++I +
Sbjct: 227 YDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDE 286
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A + ++M P+ TY IT ++ A E+ + K G V T A++
Sbjct: 287 ALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALIS 346
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
G A L+ G+ P++ TY L K+ ME +G +
Sbjct: 347 GLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLA 406
Query: 464 NKRFFLEALE 473
N + + E ++
Sbjct: 407 NTQTYNEIIK 416
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N L+ K + + ++K +++S +P+L TFN++I K +AE + ++
Sbjct: 167 NTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ 226
Query: 354 MKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+P TY +I G+C N+ A +FD + K G D T + ++ C G
Sbjct: 227 YDLSPDVFTYTSLI--LGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRV 284
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
EA + E G+ P TY L A +E +L+ RM++ G PN
Sbjct: 285 DEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPN------- 337
Query: 472 LETFSSSLAG 481
++T+++ ++G
Sbjct: 338 VQTYTALISG 347
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 145/324 (44%), Gaps = 14/324 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++ L+ + + Q A L M+ GC PD ++YNALI+ + KAK +A
Sbjct: 9 DAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGY----SKAKDFGQA 64
Query: 204 LGYFQKMKGMERCKPNIVTY-NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
+ +M C P +VTY NI+ C R D V L E+ + +P+IYTYN ++
Sbjct: 65 FKFLAEMV-KNHCLPTVVTYTNIVDGLCKAGRTKDAVK-LLDEMRDKGCSPNIYTYNVIV 122
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+ + + E + +L M PD++T+N I K D++++ K L
Sbjct: 123 EGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCK---CDRVDEARKFLARMPVT 179
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAR 380
P + ++ ++I K+ A + +MT TP +TY +I G+C V RA
Sbjct: 180 PDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLID--GFCKGGEVERAM 237
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ D + KLG + N++L A G +A+ + G TPD +Y
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 297
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
KA + + + RM + G PN
Sbjct: 298 CKAERVKKAKAVFDRMVERGCTPN 321
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 146/326 (44%), Gaps = 18/326 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKAL- 204
Y+ ++ + K G+T+ A+ L EMR+ GC P+ YN ++ R D+AK + + +
Sbjct: 83 YTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMA 142
Query: 205 --GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
GYF P++VTYN ++ + VD+ K L + PD+ +Y V+
Sbjct: 143 VRGYF----------PDVVTYNSFIKGLCKCDRVDEAR---KFLARMPVTPDVVSYTTVI 189
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+ K+G + +L +M + C PD++T++ LID + K ++ + S++ +
Sbjct: 190 NGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCR 249
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P + +NS++ + GKAE + +M +TP ++Y I + V +A+ +
Sbjct: 250 PNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAV 309
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
FD + + G S+ + ++E C +A L E + D Y +L K
Sbjct: 310 FDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCK 369
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFF 468
+ L ++ I FF
Sbjct: 370 GGRFDEACALFSKVLDEKICEPDVFF 395
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 143/352 (40%), Gaps = 46/352 (13%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ +I + K G A + +M N GC PD Y++LI K + +A
Sbjct: 181 DVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFC----KGGEVERA 236
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+G M + C+PN+V YN LL A + ++ + + E+ PD+ +YN +D
Sbjct: 237 MGLLDSMLKL-GCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACID 295
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKP----------------------------------- 288
K +K+ ++V RM C P
Sbjct: 296 GLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIV 355
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-KPTLPTFNSMIINYGKARLQGKAEYV 347
DI+ + +L+D K FD+ +F ++ K +P + +N M+ ++ K R KA +
Sbjct: 356 DILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQI 415
Query: 348 FQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
++M + + +T+ I ++G C D +S A + + G T +++A
Sbjct: 416 HKQMLE-RNCCNVVTWN--ILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAM 472
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
C G A LFE + G PD TY L NM E L +++
Sbjct: 473 CKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLD 524
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 129/294 (43%), Gaps = 8/294 (2%)
Query: 171 MRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRAC 230
M + C+PD + L+ ++ L KA +MK M C P+ YN L+
Sbjct: 1 MIDKSCQPDAFTFAILLRGLC----RSNQLEKARQLLGRMKEM-GCVPDDAIYNALISGY 55
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
++A++ Q E+ ++ P + TY ++D K G K+ +L M+ C P+I
Sbjct: 56 SKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNI 115
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
T+N++++ + + D+ +++ + + P + T+NS I K +A +
Sbjct: 116 YTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLAR 175
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M TP ++Y +I ++ A + D+++ G V T +++++ +C G
Sbjct: 176 MPV---TPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGE 232
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A L ++ +G P+ Y L A + + +L ME+ G P+
Sbjct: 233 VERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPD 286
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 125/301 (41%), Gaps = 39/301 (12%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L EEL K + + + ++++ I D +Y+ L+ + K G+ A LFS++ +
Sbjct: 327 MLVEELCKKKELDDAITLVEQ-AREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLD 385
Query: 174 SG-CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CA 231
C PD YN ++ +H K + + KAL ++M +ER N+VT+NIL+ C
Sbjct: 386 EKICEPDVFFYNVMLDSHC----KRRQIDKALQIHKQM--LERNCCNVVTWNILVHGLCV 439
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
R D L + E + PD TY ++DA K G + C PD++
Sbjct: 440 DDRLSDAETMLLTMVDEGFI-PDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVV 498
Query: 292 TF----------------------------NLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
T+ N +I Y + + D ++F L+ S +P
Sbjct: 499 TYSALITGLVHENMAEEAYLLFTKLDVALWNAMILGYAENGSGDLGLKLFVELIESDVEP 558
Query: 324 TLPTFNSMIIN-YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
TF I KA GKA +F + + P +I ++ C ++ AR I
Sbjct: 559 NARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRI 618
Query: 383 F 383
F
Sbjct: 619 F 619
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 13/177 (7%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
+I D Y L+ M K G++ A+ LF E GC PD Y+ALIT +H +A
Sbjct: 458 FIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAY 517
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
F K+ ++ +N ++ A+ + D LF EL ES + P+ T+
Sbjct: 518 L----LFTKL--------DVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGK 565
Query: 261 -VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+ K + + + R PD+ N LID + K ++ ++F S+
Sbjct: 566 EISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSM 622
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 183/386 (47%), Gaps = 24/386 (6%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
K+ +W +VF M R D +Y+ LI + + G+ + A + M G P+
Sbjct: 176 KTGRWESVGKVFEEMSG-RGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQ 238
YN LI + K ++ +AL + M KG++ P++VTYN L+ + +D+
Sbjct: 235 VTYNVLINSMC----KEGSVREALDLRKNMSEKGVQ---PDVVTYNTLITGLSSVLEMDE 287
Query: 239 VNALFKEL--HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
AL +E+ E+ + PD+ T+N V+ K G +++ V + M N C+ +++ FNLL
Sbjct: 288 AMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLL 347
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
I + K ++ + S +P T++ +I + K R +AE +M
Sbjct: 348 IGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGM 407
Query: 357 TPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P + Y I + CD + +AR++F+E+ + K + + + M+ +G A
Sbjct: 408 EPEPVHY--IPLLKAMCDQGMMGQARDLFNEMDRNCK-LDAAAYSTMIHGAFKSGEKKIA 464
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
+ ++ + G+ PD+ TY + + K+ +++LK+M +G VP+ F ++
Sbjct: 465 EEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQG 524
Query: 475 FSSSLAGSQSGSAKT-DLTRSLSTAK 499
+ G++ + K +LTR + TAK
Sbjct: 525 Y-----GAKGDTEKILELTREM-TAK 544
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 154/378 (40%), Gaps = 53/378 (14%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS---GCRPDPSVYNALITAHLHTRDKAK 198
+ D Y+ ++A + ++G A++L M + RP+ Y L+ A R A+
Sbjct: 53 VRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQ 112
Query: 199 ALAKALGYFQKMKGMERC--KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
A+ ++ M+ C +P++VTY L+R A +VD L E+ ES + P++
Sbjct: 113 AVGL-------LRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVV 165
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
Y+ ++ Y K G + + V M +PD++ + LIDS + K +V +
Sbjct: 166 VYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMM 225
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P + T+N +I + K +A + + M+ P +TY +IT +
Sbjct: 226 TERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEM 285
Query: 377 SRAREIFDEL----SKLGKDMKVSTLNAMLEAYCMNGLPTEA----DLLFENS------- 421
A + +E+ +++ D+ T N+++ C G +A ++ EN
Sbjct: 286 DEAMALLEEMMQGETRVRPDLM--TFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVA 343
Query: 422 -----------HNM-------------GVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
H + G+ PDS TY +L + K E + L M
Sbjct: 344 FNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMR 403
Query: 458 QNGIVPNKRFFLEALETF 475
G+ P ++ L+
Sbjct: 404 HQGMEPEPVHYIPLLKAM 421
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 78/185 (42%), Gaps = 18/185 (9%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y L+ M +G A LF+EM + C+ D + Y+ +I + +K K F
Sbjct: 414 YIPLLKAMCDQGMMGQARDLFNEM-DRNCKLDAAAYSTMIHGAFKSGEK-----KIAEEF 467
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K E P+ VTY+I + A++ ++ + K++ S PD+ ++ ++ YG
Sbjct: 468 LKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGA 527
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G +++ + M + D + ++ S G K+ Q +LP
Sbjct: 528 KGDTEKILELTREMTAKDVALDPKIISTIVTSLGASIEGQKLLQ------------SLPG 575
Query: 328 FNSMI 332
F++ I
Sbjct: 576 FDTEI 580
>gi|242032435|ref|XP_002463612.1| hypothetical protein SORBIDRAFT_01g002930 [Sorghum bicolor]
gi|241917466|gb|EER90610.1| hypothetical protein SORBIDRAFT_01g002930 [Sorghum bicolor]
Length = 638
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 139/313 (44%), Gaps = 10/313 (3%)
Query: 167 LFSEMRNSG---CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
LF+EMR+ RPD + YN L+ A ++LA + P+ V+Y
Sbjct: 5 LFAEMRHDASPSVRPDLTTYNTLLAAA-----AVRSLADQSEMLLRTMLEAGVSPDTVSY 59
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
++ A A A N+ +V LF E+ D Y G+M+A+ + G E +VL +M++
Sbjct: 60 RYIVDAFASAGNLSRVAELFSEMAVMGNTADASAYLGLMEAHTRVGATAEAVAVLRQMQA 119
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+ C P T+ +L+D YG++ FD + ++F+ M + P T+N + YG +
Sbjct: 120 DGCAPTAATYRVLLDLYGRQGRFDGVRELFRE-MRTAVPPDTATYNVLFRVYGDGGFFKE 178
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
+F M P +T E ++ G ARE+ + +++ G ++E
Sbjct: 179 VVELFHDMLETGVEPDMVTCENVMAACGRGGLHEDAREVLEYMTREGMVPTADAYTGLVE 238
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN-GIV 462
A + EA + F +G P TY L AY + + + + + RM N GI
Sbjct: 239 ALGHAAMYEEAYVAFNMMTEIGSLPTLETYNTLAFAYARGGLFQEAEAIFSRMSNNAGIQ 298
Query: 463 PNKRFFLEALETF 475
NK F +E +
Sbjct: 299 KNKDSFDALIEAY 311
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 134/322 (41%), Gaps = 7/322 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT Y ++ G LFSEM G D S Y L+ AH + A A+A
Sbjct: 55 DTVSYRYIVDAFASAGNLSRVAELFSEMAVMGNTADASAYLGLMEAHT----RVGATAEA 110
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ ++M+ + C P TY +LL + D V LF+E+ ++ PD TYN +
Sbjct: 111 VAVLRQMQA-DGCAPTAATYRVLLDLYGRQGRFDGVRELFREMRTAV-PPDTATYNVLFR 168
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
YG G KE+ + M +PD++T ++ + G+ + +V + + P
Sbjct: 169 VYGDGGFFKEVVELFHDMLETGVEPDMVTCENVMAACGRGGLHEDAREVLEYMTREGMVP 228
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T + ++ G A + +A F MT + P+ TY + Y A IF
Sbjct: 229 TADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNTLAFAYARGGLFQEAEAIF 288
Query: 384 DELS-KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+S G + +A++EAYC +A + PD + + + AY
Sbjct: 289 SRMSNNAGIQKNKDSFDALIEAYCQGAQLDDAVKAYMEMRKSRFNPDERSLEGVLNAYCI 348
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
A + + ++ + ++ + +P+
Sbjct: 349 AGVIDESKEQFEELQSSVTLPS 370
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 138/321 (42%), Gaps = 13/321 (4%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
AD Y L+ + G T A+ + +M+ GC P + Y L+ L+ R +
Sbjct: 89 ADASAYLGLMEAHTRVGATAEAVAVLRQMQADGCAPTAATYRVLL--DLYGRQGRFDGVR 146
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
L F++M+ P+ TYN+L R +V LF ++ E+ + PD+ T VM
Sbjct: 147 EL--FREMR--TAVPPDTATYNVLFRVYGDGGFFKEVVELFHDMLETGVEPDMVTCENVM 202
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
A G+ G+ ++ VL M P + L+++ G +++ F +
Sbjct: 203 AACGRGGLHEDAREVLEYMTREGMVPTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSL 262
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMT----AMKYTPSFITYECIITMYGYCDNVSR 378
PTL T+N++ Y + L +AE +F +M+ K SF + +I Y +
Sbjct: 263 PTLETYNTLAFAYARGGLFQEAEAIFSRMSNNAGIQKNKDSF---DALIEAYCQGAQLDD 319
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A + + E+ K + +L +L AYC+ G+ E+ FE + P Y ++
Sbjct: 320 AVKAYMEMRKSRFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTLPSIIAYCMMLS 379
Query: 439 AYTKANMKELVQKLLKRMEQN 459
Y + + +L+ M+ N
Sbjct: 380 LYARNDRWADAYDMLEEMKTN 400
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/262 (19%), Positives = 102/262 (38%), Gaps = 6/262 (2%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
EV +M ++ + Y+ L+ +G A F+ M G P YN L A
Sbjct: 216 EVLEYMTREG-MVPTADAYTGLVEALGHAAMYEEAYVAFNMMTEIGSLPTLETYNTLAFA 274
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ + +A F +M + N +++ L+ A Q +D + E+ +S
Sbjct: 275 YA----RGGLFQEAEAIFSRMSNNAGIQKNKDSFDALIEAYCQGAQLDDAVKAYMEMRKS 330
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
PD + GV++AY G+I E + ++S+ P II + +++ Y + +
Sbjct: 331 RFNPDERSLEGVLNAYCIAGVIDESKEQFEELQSSVTLPSIIAYCMMLSLYARNDRWADA 390
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIIN-YGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+ + + ++ T S+I Y + EY + T S + ++
Sbjct: 391 YDMLEEMKTNRASSTHQVIASLIKGEYDDSSNWQMVEYALENSTMEGCDYSLRFFNALLD 450
Query: 369 MYGYCDNVSRAREIFDELSKLG 390
+ + RA + D+ + G
Sbjct: 451 VLWWFGQKGRAARVLDQAVQFG 472
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 138/318 (43%), Gaps = 4/318 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + +G+ A+ + +MR +GC P+ YN L+ A +A L A
Sbjct: 155 YNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFC----RAGELDGAERVV 210
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
M+ KPN+VT+N ++ +A ++ +F E+ LAPD+ +YN ++ Y K
Sbjct: 211 SLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCK 270
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + E +V S M PD++TF LI + K ++ + + + T
Sbjct: 271 VGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVT 330
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
F ++I + K A ++M PS + Y +I Y + ARE+ E+
Sbjct: 331 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREME 390
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
V T + ++ YC G A L + GV PD+ TY L + +
Sbjct: 391 AKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLN 450
Query: 448 LVQKLLKRMEQNGIVPNK 465
+L + M Q G+ P++
Sbjct: 451 DACELFENMLQLGVQPDE 468
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 152/321 (47%), Gaps = 13/321 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ ++ + K G+ A +F EM G PD YN L++ + K L ++L F
Sbjct: 226 FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC----KVGCLHESLAVF 281
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M +G+ P++VT+ L+ A +A N++Q AL ++ E L + T+ ++D +
Sbjct: 282 SEMTQRGL---VPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGF 338
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G + + + M+ +P ++ +N LI+ Y K D ++ + + + KP +
Sbjct: 339 CKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDV 398
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIF 383
T++++I Y K A + QKM P ITY +I G C+ ++ A E+F
Sbjct: 399 VTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIR--GLCEEKRLNDACELF 456
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ + +LG T +++ +C G +A L + GV PD TY +L +K+
Sbjct: 457 ENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKS 516
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+ +LL ++ VP+
Sbjct: 517 ARTKEAHRLLFKLYHEDPVPD 537
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 175/394 (44%), Gaps = 27/394 (6%)
Query: 73 KSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVF 132
++ EL+ E V LMR + +P + T N V L K+ + +VF
Sbjct: 199 RAGELDGAERVVSLMREEGNAKPNLVTFNSMVN------------GLCKAGRMEGARKVF 246
Query: 133 RWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH 192
M ++ D Y+ L++ K G ++ +FSEM G PD + +LI H
Sbjct: 247 DEMVRE-GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLI----H 301
Query: 193 TRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KA L +A+ +M+ ER + N VT+ L+ + +D +E+ + +
Sbjct: 302 ATCKAGNLEQAVALVAQMR--ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGI 359
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
P + YN +++ Y K G + ++ M++ + KPD++T++ +I Y K D Q
Sbjct: 360 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 419
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+ + ++ P T++S+I + + A +F+ M + P TY +I G
Sbjct: 420 LNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLID--G 477
Query: 372 YC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD-LLFENSHNMGVTP 428
+C NV +A + DE+ + G V T + ++ + EA LLF+ H V P
Sbjct: 478 HCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPV-P 536
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
D+ Y L +KA K +V LLK G++
Sbjct: 537 DNIKYDALMLCCSKAEFKSVV-ALLKGFCMKGLM 569
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 132/304 (43%), Gaps = 52/304 (17%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P++ YN +L A + A ++ + +AP++YTYN ++ A G ++E V
Sbjct: 116 PSVPAYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK--EKPTLPTFNSMIINY 335
+ M+ C P+ +T+N L+ ++ + D E+V SLM + KP L TFNSM+
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVV-SLMREEGNAKPNLVTFNSMVNGL 233
Query: 336 GKA-RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--------------------- 373
KA R++G A VF +M P ++Y +++ GYC
Sbjct: 234 CKAGRMEG-ARKVFDEMVREGLAPDVVSYNTLLS--GYCKVGCLHESLAVFSEMTQRGLV 290
Query: 374 ----------------DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
N+ +A + ++ + G M T A+++ +C G +A L
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
E G+ P Y L Y K +L ++L++ ME + P+ + T+S+
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPD-------VVTYST 403
Query: 478 SLAG 481
++G
Sbjct: 404 IISG 407
>gi|388499386|gb|AFK37759.1| unknown [Lotus japonicus]
Length = 500
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 138/307 (44%), Gaps = 40/307 (13%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ I + K G A +F M+ GC+P Y LI +L+ +D +A L
Sbjct: 234 VYNSYINGLMKGGNPNKAEEIFLRMKRDGCKPSTETYTMLI--NLYGKDGKSFMA--LKV 289
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F +M +CKPNI TY L+ A A+ ++ +F+++ E+ L PD+Y+YN +M+AY
Sbjct: 290 FNEMLS-HKCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYSYNALMEAYS 348
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+ G + S M+ C+PD ++N+L+D+YG+ + E V
Sbjct: 349 RAGFPYGAAEIFSLMQHMGCEPDRASYNILVDAYGRAGFLNDAEAV-------------- 394
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
F+ M + TP+ ++ +++ + NVS+ +I +++
Sbjct: 395 ---------------------FEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQM 433
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
K G + LN+ML Y G + + + N D STY +L Y +A
Sbjct: 434 CKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGFI 493
Query: 447 ELVQKLL 453
+ ++ L
Sbjct: 494 DKMEGLF 500
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 132/265 (49%), Gaps = 6/265 (2%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
K +++ YN+L+ A Q + + + +L E+ P+ TY ++ AY +G++++ E+
Sbjct: 159 KQDVICYNLLIDAFGQKFLYKEAESTYLQLLEARCIPNEDTYALLIKAYCLSGLLEKAEA 218
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
V MK+ + +N I+ K +K E++F + KP+ T+ +I YG
Sbjct: 219 VFVEMKNYGLPSSAVVYNSYINGLMKGGNPNKAEEIFLRMKRDGCKPSTETYTMLINLYG 278
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMY---GYCDNVSRAREIFDELSKLGKDM 393
K A VF +M + K P+ TY ++ + G C+ +A E+F+++ + G +
Sbjct: 279 KDGKSFMALKVFNEMLSHKCKPNICTYTALVNAFAREGLCE---KAEEVFEQMQEAGLEP 335
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
V + NA++EAY G P A +F +MG PD ++Y +L AY +A + +
Sbjct: 336 DVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNILVDAYGRAGFLNDAEAVF 395
Query: 454 KRMEQNGIVPNKRFFLEALETFSSS 478
+ M++ GI P + + L FS +
Sbjct: 396 EDMKRVGITPTMKSHMVLLSAFSKT 420
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 137/285 (48%), Gaps = 5/285 (1%)
Query: 177 RPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
+ D YN LI A +A + Y Q ++ RC PN TY +L++A + +
Sbjct: 159 KQDVICYNLLIDAFGQKFLYKEAEST---YLQLLEA--RCIPNEDTYALLIKAYCLSGLL 213
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
++ A+F E+ L YN ++ K G + E + RMK + CKP T+ +L
Sbjct: 214 EKAEAVFVEMKNYGLPSSAVVYNSYINGLMKGGNPNKAEEIFLRMKRDGCKPSTETYTML 273
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
I+ YGK +VF ++ K KP + T+ +++ + + L KAE VF++M
Sbjct: 274 INLYGKDGKSFMALKVFNEMLSHKCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGL 333
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
P +Y ++ Y A EIF + +G + ++ N +++AY G +A+
Sbjct: 334 EPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNILVDAYGRAGFLNDAEA 393
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+FE+ +G+TP ++ +L A++K + +L +M ++G+
Sbjct: 394 VFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGL 438
>gi|115440859|ref|NP_001044709.1| Os01g0833000 [Oryza sativa Japonica Group]
gi|20805252|dbj|BAB92918.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113534240|dbj|BAF06623.1| Os01g0833000 [Oryza sativa Japonica Group]
Length = 665
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 154/341 (45%), Gaps = 16/341 (4%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
+ R D YS L+A + + G A+ M + PD +++ LI L D
Sbjct: 155 RDRGVAPDAFSYSTLLAALTRAGHLDHALTFLPLMEDDAVAPDLVLFSNLIHLALRGGDA 214
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDI 255
KALA F +++G KP++ YN + A C D L ++ +APD
Sbjct: 215 PKALA----LFSRLRGAAGIKPDLKAYNAAIAAYCKSDLLRDANRLLLHDMPSDGVAPDA 270
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKS-NQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
+Y+ ++ A + G S+ + M++ + KPD+ FN+++++YG+ + +++F
Sbjct: 271 ESYSPILAALARRGRHLAAVSLFTHMRAVARVKPDLSVFNIVLNAYGQLDLAREADRLFW 330
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK----------YTPSFITYE 364
S+ + P++ T+N+M+ YG A L G+A ++F M + P+ +TY
Sbjct: 331 SMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRSAASDGSDRGGSVIKPNVVTYN 390
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
+I +YG +A + ++ G T + +L + G A LFE
Sbjct: 391 TMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKAGKLDRAGKLFEKLREA 450
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
G D Y+ + AY +A + ++LL ++ + VP +
Sbjct: 451 GTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLKDSEDVPKE 491
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 165/369 (44%), Gaps = 57/369 (15%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS-GCRPDPSVYNALITAHLHT---RDKAKA 199
D ++S LI + + G A+ LFS +R + G +PD YNA I A+ + RD +
Sbjct: 197 DLVLFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKSDLLRDANRL 256
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQ-ARNVDQVNALFKELHE-SILAPDIYT 257
L M + P+ +Y+ +L A A+ R++ V+ LF + + + PD+
Sbjct: 257 L------LHDMPS-DGVAPDAESYSPILAALARRGRHLAAVS-LFTHMRAVARVKPDLSV 308
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
+N V++AYG+ + +E + + M+ P ++T+N ++ YG F + +F LM
Sbjct: 309 FNIVLNAYGQLDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLF-GLM 367
Query: 318 HSKE-----------KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
S KP + T+N+MI YGK+ KA + Q M A P+ ITY I
Sbjct: 368 RSAASDGSDRGGSVIKPNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTI 427
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT-------------- 412
++++ + RA ++F++L + G ++ M+ AY GL +
Sbjct: 428 LSIWVKAGKLDRAGKLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLKDSED 487
Query: 413 -----------------EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
EA LF + + G D+S Y+++ + K+ V ++
Sbjct: 488 VPKETAIKILANAGRVEEAAWLFRRAADAGDVRDTSVYRMMIDLFAKSRRHRSVIEVFDE 547
Query: 456 MEQNGIVPN 464
M + G +P+
Sbjct: 548 MRKAGSLPD 556
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 119/293 (40%), Gaps = 48/293 (16%)
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
++ YN+LLR+ +A + + L E+ + +APD ++Y+ ++ A + G + + L
Sbjct: 128 LIPYNLLLRSACRAGMLRLASGLLLEMRDRGVAPDAFSYSTLLAALTRAGHLDHALTFLP 187
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-KPTLPTFNSMIINYGKA 338
M+ + PD++ F+ LI + K +F L + KP L +N+ I Y K+
Sbjct: 188 LMEDDAVAPDLVLFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKS 247
Query: 339 RL---------------------------------QGK---AEYVFQKMTAM-KYTPSFI 361
L +G+ A +F M A+ + P
Sbjct: 248 DLLRDANRLLLHDMPSDGVAPDAESYSPILAALARRGRHLAAVSLFTHMRAVARVKPDLS 307
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF--- 418
+ ++ YG D A +F + + G V T N ML Y GL EA LF
Sbjct: 308 VFNIVLNAYGQLDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLM 367
Query: 419 -----ENSHNMG--VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ S G + P+ TY + Y K+ E L++ M+ NGI PN
Sbjct: 368 RSAASDGSDRGGSVIKPNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPN 420
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 80/169 (47%), Gaps = 9/169 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS ++++ K G+ A LF ++R +G DP +Y ++ A+ ++A ++++
Sbjct: 424 YSTILSIWVKAGKLDRAGKLFEKLREAGTEIDPVLYQTMVVAY----ERAGLVSQSKRLL 479
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+K E P IL A A V++ LF+ ++ D Y ++D + K
Sbjct: 480 HDLKDSEDV-PKETAIKIL----ANAGRVEEAAWLFRRAADAGDVRDTSVYRMMIDLFAK 534
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+ + + V M+ PD T + ++++GK + FDK +++++
Sbjct: 535 SRRHRSVIEVFDEMRKAGSLPDSETIAITMNAHGKLKEFDKAAALYRAM 583
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 108/270 (40%), Gaps = 52/270 (19%)
Query: 129 LEVFRWMQKQRWYIADTGI------YSKLIAVMGKKGQTRLAMWLFSEMRNSG------- 175
L++ R + W + G+ Y+ ++ V G G A+ LF MR++
Sbjct: 319 LDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRSAASDGSDRG 378
Query: 176 ---CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
+P+ YN +I + + + KA + Q M+ +PN +TY+ +L +
Sbjct: 379 GSVIKPNVVTYNTMIAIYGKSLEDEKAGS----LVQDMQA-NGIQPNAITYSTILSIWVK 433
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP---- 288
A +D+ LF++L E+ D Y ++ AY + G++ + + +L +K ++ P
Sbjct: 434 AGKLDRAGKLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLKDSEDVPKETA 493
Query: 289 ---------------------------DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
D + ++ID + K + + +VF + +
Sbjct: 494 IKILANAGRVEEAAWLFRRAADAGDVRDTSVYRMMIDLFAKSRRHRSVIEVFDEMRKAGS 553
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
P T + +GK + KA +++ M
Sbjct: 554 LPDSETIAITMNAHGKLKEFDKAAALYRAM 583
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 146/326 (44%), Gaps = 19/326 (5%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH--LHTRDKAKALA 201
D IYS +I + K G A +LFSEM G P+ YN +I A+ L
Sbjct: 290 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 349
Query: 202 KALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+ + +ER P+++T+N L+ A + + + L E+ + PD TYN
Sbjct: 350 RDM--------IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNS 401
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ + K+ + + + M S PD++TFN +ID Y + + D+ Q+ + +
Sbjct: 402 MIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG 457
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSR 378
T+N++I + + A+ +FQ+M + P IT C I +YG+C+N +
Sbjct: 458 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT--CNILLYGFCENEKLEE 515
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A E+F+ + D+ N ++ C EA LF + GV PD TY ++
Sbjct: 516 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 575
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPN 464
+ + L +M+ NG P+
Sbjct: 576 GFCGKSAISDANVLFHKMKDNGHEPD 601
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 168/352 (47%), Gaps = 26/352 (7%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y ++ M K G T+ A+ L S+M + +PD +Y+A+I +D + A+
Sbjct: 255 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL--CKDGHHSDAQY 312
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNG 260
L F +M KG+ PN+ TYN ++ C+ R D L +++ E + PD+ T+N
Sbjct: 313 L--FSEMLEKGI---APNVFTYNCMIDGFCSFGRWSD-AQRLLRDMIEREINPDVLTFNA 366
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ A K G + E E + M PD +T+N +I + K FD + +F LM S
Sbjct: 367 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMAS- 424
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSR 378
P + TFN++I Y +A+ + + ++++ + TY +I +G+C DN++
Sbjct: 425 --PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI--HGFCEVDNLNA 480
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A+++F E+ G T N +L +C N EA LFE + D+ Y ++
Sbjct: 481 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 540
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTD 490
K + + L + +G+ P+ ++T++ ++G SA +D
Sbjct: 541 GMCKGSKVDEAWDLFCSLPIHGVEPD-------VQTYNVMISGFCGKSAISD 585
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 142/315 (45%), Gaps = 11/315 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ LI + +G+ A L ++M G D Y ++ D AL
Sbjct: 224 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL----NLL 279
Query: 208 QKMKGMERCKPNIVTYN-ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
KM+ KP++V Y+ I+ R C + D LF E+ E +AP+++TYN ++D +
Sbjct: 280 SKMEE-THIKPDVVIYSAIIDRLCKDGHHSD-AQYLFSEMLEKGIAPNVFTYNCMIDGFC 337
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
G + + +L M + PD++TFN LI + K + E++ ++H P
Sbjct: 338 SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 397
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T+NSMI + K A+++F M +P +T+ II +Y V ++ E+
Sbjct: 398 TYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREI 453
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
S+ G +T N ++ +C A LF+ + GV PD+ T +L + +
Sbjct: 454 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 513
Query: 447 ELVQKLLKRMEQNGI 461
E +L + ++ + I
Sbjct: 514 EEALELFEVIQMSKI 528
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 138/341 (40%), Gaps = 53/341 (15%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W + R M +R D ++ LI+ K+G+ A L EM + PD Y
Sbjct: 341 RWSDAQRLLRDMI-EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 399
Query: 184 NALITAHL-HTR-DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
N++I H R D AK + + P++VT+N ++ +A+ VD+
Sbjct: 400 NSMIYGFCKHNRFDDAKHMFDLMA-----------SPDVVTFNTIIDVYCRAKRVDEGMQ 448
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
L +E+ L + TYN ++ + + + + + M S+ PD IT N+L+ +
Sbjct: 449 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 508
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
+ + ++ ++F+ + SK +N
Sbjct: 509 ENEKLEEALELFEVIQMSKIDLDTVAYN-------------------------------- 536
Query: 362 TYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
I ++G C V A ++F L G + V T N M+ +C ++A++LF
Sbjct: 537 -----IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 591
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+ G PD+STY L + KA + +L+ M NG
Sbjct: 592 KMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 632
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 150/346 (43%), Gaps = 20/346 (5%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
++ F +M + R + +K+I V + + +A+ L+ +M + +N LI
Sbjct: 91 IDFFDYMVRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIK 149
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVD---------Q 238
L+ +L F K+ + +P++VT+N LL C + R + +
Sbjct: 150 CFC----DCHKLSFSLSTFGKLTKLGF-QPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+LF ++ E L P + T+N +++ G + E +++++M D++T+ +++
Sbjct: 205 TGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 264
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
K + + + KP + ++++I K A+Y+F +M P
Sbjct: 265 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 324
Query: 359 SFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
+ TY C+I G+C S A+ + ++ + + V T NA++ A G EA+
Sbjct: 325 NVFTYNCMID--GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 382
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
L + + + PD+ TY + + K N + + + M +V
Sbjct: 383 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVV 428
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 6/168 (3%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM 171
C +L +++K + LE+F +Q + + DT Y+ +I M K + A LF +
Sbjct: 500 CNILLYGFCENEKLEEALELFEVIQMSKIDL-DTVAYNIIIHGMCKGSKVDEAWDLFCSL 558
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
G PD YN +I+ A++ A F KMK +P+ TYN L+R C
Sbjct: 559 PIHGVEPDVQTYNVMISGFC----GKSAISDANVLFHKMKDNGH-EPDNSTYNTLIRGCL 613
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+A +D+ L E+ + + D +T V D + K +LS
Sbjct: 614 KAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRLDKSFSDMLS 661
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 116/282 (41%), Gaps = 21/282 (7%)
Query: 198 KALAKALGYFQKMKGMERCKP--NIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
K+L A+ +F M R +P V N ++ + D +L++++ + +I
Sbjct: 85 KSLDDAIDFFDYMV---RSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNI 141
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI------DSYGKRQA-FDK 308
Y++N ++ + + S ++ +PD++TFN L+ D + A F
Sbjct: 142 YSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGY 201
Query: 309 MEQ---VFKSLMHSKEKPTLPTFNSMIINYGKARLQGK---AEYVFQKMTAMKYTPSFIT 362
M + +F ++ P + TFN++I L+G+ A + KM +T
Sbjct: 202 MVETGSLFDQMVEIGLTPVVITFNTLI---NGLCLEGRVLEAAALVNKMVGKGLHIDVVT 258
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y I+ + A + ++ + V +A+++ C +G ++A LF
Sbjct: 259 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 318
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G+ P+ TY + + Q+LL+ M + I P+
Sbjct: 319 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 360
>gi|125528270|gb|EAY76384.1| hypothetical protein OsI_04314 [Oryza sativa Indica Group]
Length = 665
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 154/341 (45%), Gaps = 16/341 (4%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
+ R D YS L+A + + G A+ M + PD +++ LI L D
Sbjct: 155 RDRGVAPDAFSYSTLLAALTRAGHLDHALTFLPLMEDDAVAPDLVLFSNLIHLALRGGDA 214
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDI 255
KALA F +++G KP++ YN + A C D L ++ +APD
Sbjct: 215 PKALA----LFSRLRGAAGIKPDLKAYNAAIAAYCKSDLLRDANRLLLHDMPSDGVAPDA 270
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKS-NQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
+Y+ ++ A + G S+ + M++ + KPD+ FN+++++YG+ + +++F
Sbjct: 271 ESYSPILAALARRGRHLAAVSLFTHMRTVARVKPDLSVFNIVLNAYGQLDLAREADRLFW 330
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK----------YTPSFITYE 364
S+ + P++ T+N+M+ YG A L G+A ++F M + P+ +TY
Sbjct: 331 SMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRSAASDGSDRGGSVIKPNVVTYN 390
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
+I +YG +A + ++ G T + +L + G A LFE
Sbjct: 391 TMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKAGKLDRAGKLFEKLREA 450
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
G D Y+ + AY +A + ++LL ++ + VP +
Sbjct: 451 GTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLKDSEDVPKE 491
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 165/369 (44%), Gaps = 57/369 (15%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS-GCRPDPSVYNALITAHLHT---RDKAKA 199
D ++S LI + + G A+ LFS +R + G +PD YNA I A+ + RD +
Sbjct: 197 DLVLFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKSDLLRDANRL 256
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQ-ARNVDQVNALFKELHE-SILAPDIYT 257
L M + P+ +Y+ +L A A+ R++ V+ LF + + + PD+
Sbjct: 257 L------LHDMPS-DGVAPDAESYSPILAALARRGRHLAAVS-LFTHMRTVARVKPDLSV 308
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
+N V++AYG+ + +E + + M+ P ++T+N ++ YG F + +F LM
Sbjct: 309 FNIVLNAYGQLDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLF-GLM 367
Query: 318 HSKE-----------KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
S KP + T+N+MI YGK+ KA + Q M A P+ ITY I
Sbjct: 368 RSAASDGSDRGGSVIKPNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTI 427
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT-------------- 412
++++ + RA ++F++L + G ++ M+ AY GL +
Sbjct: 428 LSIWVKAGKLDRAGKLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLKDSED 487
Query: 413 -----------------EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
EA LF + + G D+S Y+++ + K+ V ++
Sbjct: 488 VPKETAIKILANAGRVEEAAWLFRRAADAGDVRDTSVYRMMIDLFAKSRRHRSVIEVFDE 547
Query: 456 MEQNGIVPN 464
M + G +P+
Sbjct: 548 MRKAGSLPD 556
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 118/293 (40%), Gaps = 48/293 (16%)
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
++ YN+LLR+ +A + + L E+ + +APD ++Y+ ++ A + G + + L
Sbjct: 128 LIPYNLLLRSACRAGMLRLASGLLLEMRDRGVAPDAFSYSTLLAALTRAGHLDHALTFLP 187
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-KPTLPTFNSMIINYGKA 338
M+ + PD++ F+ LI + K +F L + KP L +N+ I Y K+
Sbjct: 188 LMEDDAVAPDLVLFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKS 247
Query: 339 RL---------------------------------QGK---AEYVFQKM-TAMKYTPSFI 361
L +G+ A +F M T + P
Sbjct: 248 DLLRDANRLLLHDMPSDGVAPDAESYSPILAALARRGRHLAAVSLFTHMRTVARVKPDLS 307
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF--- 418
+ ++ YG D A +F + + G V T N ML Y GL EA LF
Sbjct: 308 VFNIVLNAYGQLDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLM 367
Query: 419 -----ENSHNMG--VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ S G + P+ TY + Y K+ E L++ M+ NGI PN
Sbjct: 368 RSAASDGSDRGGSVIKPNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPN 420
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 80/169 (47%), Gaps = 9/169 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS ++++ K G+ A LF ++R +G DP +Y ++ A+ ++A ++++
Sbjct: 424 YSTILSIWVKAGKLDRAGKLFEKLREAGTEIDPVLYQTMVVAY----ERAGLVSQSKRLL 479
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+K E P IL A A V++ LF+ ++ D Y ++D + K
Sbjct: 480 HDLKDSEDV-PKETAIKIL----ANAGRVEEAAWLFRRAADAGDVRDTSVYRMMIDLFAK 534
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+ + + V M+ PD T + ++++GK + FDK +++++
Sbjct: 535 SRRHRSVIEVFDEMRKAGSLPDSETIAITMNAHGKLKEFDKAAALYRAM 583
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 107/270 (39%), Gaps = 52/270 (19%)
Query: 129 LEVFRWMQKQRWYIADTGI------YSKLIAVMGKKGQTRLAMWLFSEMRNSG------- 175
L++ R + W + G+ Y+ ++ V G G A+ LF MR++
Sbjct: 319 LDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRSAASDGSDRG 378
Query: 176 ---CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
+P+ YN +I + K+ KA Q M+ +PN +TY+ +L +
Sbjct: 379 GSVIKPNVVTYNTMIAIY----GKSLEDEKAGSLVQDMQA-NGIQPNAITYSTILSIWVK 433
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP---- 288
A +D+ LF++L E+ D Y ++ AY + G++ + + +L +K ++ P
Sbjct: 434 AGKLDRAGKLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLKDSEDVPKETA 493
Query: 289 ---------------------------DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
D + ++ID + K + + +VF + +
Sbjct: 494 IKILANAGRVEEAAWLFRRAADAGDVRDTSVYRMMIDLFAKSRRHRSVIEVFDEMRKAGS 553
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
P T + +GK + KA +++ M
Sbjct: 554 LPDSETIAITMNAHGKLKEFDKAAALYRAM 583
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 193/435 (44%), Gaps = 22/435 (5%)
Query: 10 SLRLSTLSSSSASSSSSSSSSSFNQSSSQNYNFTHRHIPLSLRTRPRTGICCVWTRPRS- 68
+L +T SS+ + + + + FN+ + R +PL++ T CC R
Sbjct: 118 ALARATSSSACITDGPALALALFNRVCREQAG--PRVVPLTVHTYSILMDCCCRARRPDL 175
Query: 69 ---------KRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCF---LLF 116
+ G K ++ + L++ L + +E + L++ ++ + F ++
Sbjct: 176 GLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIIL 235
Query: 117 EELGKSDKWLQCLEVFRWMQKQRWYIADTGI-YSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
+ L + + L++F+ M K+ + + Y+ +I K+G+T A LF EM G
Sbjct: 236 KGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQG 295
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
+PD YN +I A KA+A+ KA ++M +P+ VTYN ++ A
Sbjct: 296 VKPDVVTYNLIIDALC----KARAMDKAELVLRQMT-TNGAQPDTVTYNCMIHGYATLGR 350
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
+ + +F+++ L P+I N + + K+G KE + M + KPDI+++
Sbjct: 351 LKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCT 410
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
L+ Y F M +F S+ + FN +I Y K + A +F +M
Sbjct: 411 LLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQG 470
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
+P +TY +I+ + ++ A E F+++ G + +++++ +CM+G +A
Sbjct: 471 VSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAK 530
Query: 416 LLFENSHNMGVT-PD 429
L N G+ PD
Sbjct: 531 ELVSEMINKGIPRPD 545
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 139/312 (44%), Gaps = 9/312 (2%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM-KGMERCKPNIVTYNI 225
L M GC P+ Y+ ++ D + + +AL FQ M K C PN+V YN
Sbjct: 215 LLHRMSELGCVPNVFSYSIILKGLC---DNSMS-QRALDLFQMMAKEGGACSPNVVAYNT 270
Query: 226 LLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ 285
++ + + +LF E+ + PD+ TYN ++DA K + + E VL +M +N
Sbjct: 271 VIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNG 330
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
+PD +T+N +I Y + ++F+ + P + NS + + K +A
Sbjct: 331 AQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAA 390
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI--FDELSKLGKDMKVSTLNAMLE 403
+F MTA + P ++Y C + ++GY A I F+ + G N ++
Sbjct: 391 EIFDSMTAKGHKPDIVSY-CTL-LHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIH 448
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
AY G+ +A L+F GV+PD TY + A+++ + +M GI P
Sbjct: 449 AYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQP 508
Query: 464 NKRFFLEALETF 475
N + ++ F
Sbjct: 509 NTAVYHSIIQGF 520
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 156/348 (44%), Gaps = 12/348 (3%)
Query: 122 SDKWL-QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
S+ W + +F M K AD +++ LI K+G AM +F+EM+ G PD
Sbjct: 417 SEGWFADMIGLFNSM-KSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDV 475
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQ 238
Y+ +I+A + L A+ F +M +G++ PN Y+ +++ + +
Sbjct: 476 VTYSTVISAF----SRMGRLTDAMEKFNQMVARGIQ---PNTAVYHSIIQGFCMHGGLVK 528
Query: 239 VNALFKE-LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
L E +++ I PDI +N V+++ K+G + + + + +PD+ITF LI
Sbjct: 529 AKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLI 588
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
D Y DK ++ ++ + + T+++++ Y K +F++M
Sbjct: 589 DGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVK 648
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P+ +TY ++ AR+ F E+ + G + VS +L C N EA +L
Sbjct: 649 PNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIIL 708
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
F+ M V + + A K KE ++L + +G++PN+
Sbjct: 709 FQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNE 756
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 119/265 (44%), Gaps = 6/265 (2%)
Query: 216 CKPNIVTYNILLRA-CAQA---RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMI 271
C PN+ +Y+I+L+ C + R +D + KE +P++ YN V+ + K G
Sbjct: 224 CVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKE--GGACSPNVVAYNTVIHGFFKEGET 281
Query: 272 KEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM 331
+ S+ M KPD++T+NL+ID+ K +A DK E V + + + +P T+N M
Sbjct: 282 GKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCM 341
Query: 332 IINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGK 391
I Y +A +F+KM + P+ + + A EIFD ++ G
Sbjct: 342 IHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGH 401
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
+ + +L Y G + LF + + G+ D + +L AY K M +
Sbjct: 402 KPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAML 461
Query: 452 LLKRMEQNGIVPNKRFFLEALETFS 476
+ M+Q G+ P+ + + FS
Sbjct: 462 IFTEMQQQGVSPDVVTYSTVISAFS 486
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 120/313 (38%), Gaps = 48/313 (15%)
Query: 201 AKALGYFQKMKGMERCKPNIV-----TYNILLRACAQARNVDQVNALFKELHESILAPDI 255
A AL F ++ E+ P +V TY+IL+ C +AR D LF + + L
Sbjct: 134 ALALALFNRV-CREQAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQ 192
Query: 256 YTYNGVMDAYGKNGMIKEMESVL-SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
T + ++ +E +VL RM C P++ ++++++ + +F+
Sbjct: 193 ITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQ 252
Query: 315 SLMHSKE----KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF---------- 360
M +KE P + +N++I + K GKA +F +MT P
Sbjct: 253 --MMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDAL 310
Query: 361 -------------------------ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
+TY C+I Y + A ++F ++ G +
Sbjct: 311 CKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNI 370
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
N+ L + C +G EA +F++ G PD +Y L Y + L
Sbjct: 371 VICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNS 430
Query: 456 MEQNGIVPNKRFF 468
M+ NGI + R F
Sbjct: 431 MKSNGIAADCRVF 443
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 96/246 (39%), Gaps = 30/246 (12%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH--LHTRDKAKALA 201
D ++ +I + K G+ A +F + + G RPD + +LI + + DKA +
Sbjct: 545 DIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKIL 604
Query: 202 KAL-----------------GYFQK---------MKGMER--CKPNIVTYNILLRACAQA 233
A+ GYF+ + M+R KPN VTY I+L +A
Sbjct: 605 DAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRA 664
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
F E+ ES + Y ++ +N E + ++ + K I
Sbjct: 665 GRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITIL 724
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N +I++ K Q ++ +++F ++ S P T+ MIIN K A +F M
Sbjct: 725 NTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEK 784
Query: 354 MKYTPS 359
P
Sbjct: 785 SGIVPG 790
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 143/323 (44%), Gaps = 10/323 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI K + L E+ G PD Y+ +I KA L A
Sbjct: 178 DIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLC----KAGRLRDA 233
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ F++M C P +TYN L+ +A ++D+ L ++ + APD+ TY +M
Sbjct: 234 VDIFEEMS----CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMS 289
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
A+ K G + + + +M +N+ PD++TF L+D + ++ + + P
Sbjct: 290 AFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPP 349
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T+ T+N ++ Y KA KAE + + + P+ +TY ++ +A +
Sbjct: 350 TIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYL 409
Query: 384 DELSKLGKDM--KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
D+L+ G V+ +L+A C +G +A +E G P ++T+ + A
Sbjct: 410 DQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALC 469
Query: 442 KANMKELVQKLLKRMEQNGIVPN 464
KA+ + +LL+ M + G P
Sbjct: 470 KAHQPQQAHELLEEMIKYGHTPG 492
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 155/353 (43%), Gaps = 15/353 (4%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L K+ + ++V + M R ++ D + ++ + + A L EM +
Sbjct: 45 LVHGLSKARRLRDAVQVLQEMVSAR-HVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHR 103
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQA 233
G + Y+AL+ K + L +A+ + M ER C P +VTYN ++ +A
Sbjct: 104 GMAANAITYSALVDGLC----KCERLDEAVALVETMA--ERGCAPTVVTYNSIITGFCRA 157
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
R VD+ + +++ PDI TY ++ + K+ + +L + PDI+T+
Sbjct: 158 RRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTY 217
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+ +ID K +F+ + + PT T+NS+I Y +A +A + KM
Sbjct: 218 STVIDGLCKAGRLRDAVDIFEEMSCA---PTAITYNSLIGGYCRAGDMDEAIRLLGKMVD 274
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDEL--SKLGKDMKVSTLNAMLEAYCMNGLP 411
K P +TY +++ + + A E+F ++ +KL D V T ++++ C G
Sbjct: 275 DKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPD--VVTFTSLVDGLCGEGRM 332
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+A L E G P TY + Y KAN ++L+ G VPN
Sbjct: 333 EDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPN 385
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 143/318 (44%), Gaps = 12/318 (3%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+R + D YS +I + K G+ R A+ +F EM C P YN+LI + D
Sbjct: 207 RRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMD 263
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+A+ + LG KM ++C P++VTY L+ A + +D LF+++ + L+PD+ T
Sbjct: 264 EAI-RLLG---KMVD-DKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVT 318
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
+ ++D G +++ +L + C P I T+N ++D Y K K E++
Sbjct: 319 FTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFR 378
Query: 318 HSKEKPTLPTFNSMIINYGKA-RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN- 375
P T+N ++ +A R +Y+ Q + P+ + II + C +
Sbjct: 379 SRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAII-LDALCRDG 437
Query: 376 -VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
A + ++E+ + G +T ++ A C P +A L E G TP T
Sbjct: 438 RTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCD 497
Query: 435 LLYKAYTKANMKELVQKL 452
+ AY +A M + +L
Sbjct: 498 AVVSAYCRAGMIQKADEL 515
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 151/337 (44%), Gaps = 16/337 (4%)
Query: 145 TGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKAL 204
T +++ +I + + G+ R A+ ++ +M N PD Y L+ H KA+ L A+
Sbjct: 5 TLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLV----HGLSKARRLRDAV 59
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
Q+M R P+ T +++++ VD L +E+ +A + TY+ ++D
Sbjct: 60 QVLQEMVS-ARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDG 118
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
K + E +++ M C P ++T+N +I + + + D+ + ++ P
Sbjct: 119 LCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPD 178
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ T+ ++I + K+R G+ + ++T +TP +TY +I G C R R+ D
Sbjct: 179 IITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVID--GLC-KAGRLRDAVD 235
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
++ T N+++ YC G EA L + PD TY L A+ K
Sbjct: 236 IFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMG 295
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
+ +L ++M N + P+ + TF+S + G
Sbjct: 296 RLDDAYELFQQMVANKLSPD-------VVTFTSLVDG 325
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 151/357 (42%), Gaps = 50/357 (14%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + +G + A+ + +MR +GC P+ YN L+ A + A
Sbjct: 153 YNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGA-------- 204
Query: 208 QKMKGM---ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
+++ GM KPN+VT+N ++ +A ++ +F E+ LAPD +YN ++
Sbjct: 205 ERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGG 264
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITF-----------NL------------------ 295
Y K G E SV + M PD++TF NL
Sbjct: 265 YCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMN 324
Query: 296 ------LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
LID + K+ D + + + KP++ +N++I Y +A +
Sbjct: 325 EVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLH 384
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVS--RAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
+M A P +TY II+ YC N A E+ ++ + G T ++++ C
Sbjct: 385 EMEAKGLKPDVVTYSTIIS--AYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCE 442
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
++A +LF+N +G+ PD TY L + K E L +M + G++P+
Sbjct: 443 EKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPD 499
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 154/357 (43%), Gaps = 29/357 (8%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ L VF M Q+ + D ++ LI VM K G A+ L +MR G + + + AL
Sbjct: 273 EALSVFAEMT-QKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTAL 331
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERC--KPNIVTYNILLRACAQARNVDQVNALFK 244
I K L AL ++GM +C KP++V YN L+ +D+ L
Sbjct: 332 IDGFC----KKGFLDDAL---LAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLH 384
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
E+ L PD+ TY+ ++ AY KN + +M PD IT++ LI + +
Sbjct: 385 EMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEK 444
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
+FK+++ +P T+ S+I + K +A + KM P +TY
Sbjct: 445 RLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYS 504
Query: 365 CIITMYGYCDNVSRAREI---------------FDELSKLGKDMKVSTLNAMLEAYCMNG 409
+I A+++ +D L + ++ ++ A+L+ +CM G
Sbjct: 505 VLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKG 564
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN--MKELVQKLLKRMEQNGIVPN 464
L EAD ++++ + D S Y +L + +A MK L K+M Q G PN
Sbjct: 565 LMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKAL--SFHKQMLQRGFAPN 619
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 130/287 (45%), Gaps = 8/287 (2%)
Query: 180 PSV--YNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
PSV YNA++ A +L A +F M + PN+ TYNIL+RA +
Sbjct: 114 PSVLAYNAVLLAL-----SDASLTSARRFFDSMLS-DGVAPNVYTYNILIRALCGRGHRK 167
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ ++ +++ + P++ TYN ++ A+ + G + E ++ M KP+++TFN ++
Sbjct: 168 EALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMV 227
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+ K + +VF +M P ++N+++ Y KA +A VF +MT
Sbjct: 228 NGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIM 287
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P +T+ +I + N+ A + ++ + G M T A+++ +C G +A L
Sbjct: 288 PDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLA 347
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ P Y L Y + ++LL ME G+ P+
Sbjct: 348 VRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPD 394
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 143/318 (44%), Gaps = 9/318 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ ++ M K G+ A +F EM G PD YN L+ + KA +AL F
Sbjct: 223 FNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYC----KAGCSHEALSVF 278
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M KG+ P++VT+ L+ +A N++ L +++ E L + T+ ++D +
Sbjct: 279 AEMTQKGI---MPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGF 335
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G + + + M+ + KP ++ +N LI+ Y D+ ++ + KP +
Sbjct: 336 CKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDV 395
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T++++I Y K A + Q+M P ITY +I + +S A +F
Sbjct: 396 VTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKN 455
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ KLG T ++++ +C G A L + GV PD TY +L +K+
Sbjct: 456 MIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSAR 515
Query: 446 KELVQKLLKRMEQNGIVP 463
Q+LL ++ +P
Sbjct: 516 AMEAQQLLFKLYHEEPIP 533
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 113/258 (43%), Gaps = 36/258 (13%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+++ YN +L A + A ++ F + +AP++YTYN ++ A G KE S+
Sbjct: 114 PSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSI 172
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L M+ C P+++T+N L+ ++ + D E++ ++ KP L TFNSM+ K
Sbjct: 173 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCK 232
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
A GK E AR++FDE+ + G +
Sbjct: 233 A---GKME--------------------------------DARKVFDEMMREGLAPDGVS 257
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
N ++ YC G EA +F G+ PD T+ L KA E L+++M
Sbjct: 258 YNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMR 317
Query: 458 QNGIVPNKRFFLEALETF 475
+ G+ N+ F ++ F
Sbjct: 318 ERGLQMNEVTFTALIDGF 335
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 150/338 (44%), Gaps = 28/338 (8%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI G+ A L EM G +PD Y+ +I+A+ D A
Sbjct: 363 YNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFE----LN 418
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
Q+M KG+ P+ +TY+ L+R + + + + LFK + + L PD +TY ++D +
Sbjct: 419 QQMLEKGV---LPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGH 475
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR-QAFDKMEQVFK---------- 314
K G ++ S+ +M PD++T+++LI+ K +A + + +FK
Sbjct: 476 CKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPAN 535
Query: 315 ----SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+LMH K L + +++ + L +A+ V+Q M + Y +I +
Sbjct: 536 TKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLI--H 593
Query: 371 GYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
G+C NV +A ++ + G ++ +++ NG+ EAD + + N
Sbjct: 594 GHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLA 653
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
D+ K L + V +L M ++G++P+ R
Sbjct: 654 DAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPSPR 691
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 149/354 (42%), Gaps = 48/354 (13%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K R + + +Y+ L K G+ + A+ +F + + PD YNA+I H D
Sbjct: 187 KVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----PDAIAYNAIIHGHCRKNDC 242
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
AL F K + P++ TYNIL+ +A D+ + + E+ + + PD
Sbjct: 243 DGALE-----FLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTV 297
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCK----------------------------- 287
T+N +MD K G + S+L+ M C+
Sbjct: 298 TFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEF 357
Query: 288 ------PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
PD++T+++L D KR D+ ++ K + P L T+N++I KA
Sbjct: 358 VSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKT 417
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLN 399
KA + + + + + P +TY I+ G C + +A ++ + + K G V T
Sbjct: 418 EKAYELLESLVSSGFVPDVVTYTIIVD--GLCKEGRLDKALKMVEGMLKRGCTPSVITYT 475
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
A++E C G EA +F+ + T D+ Y L Y K++ + QK++
Sbjct: 476 ALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVV 529
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 157/356 (44%), Gaps = 19/356 (5%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K+ K + E+ M R DT ++ ++ + K G+ A L + M
Sbjct: 266 ILIDGLCKASKTDKASEMLHEMV-DRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAE 324
Query: 174 SGCRPDPSVYNALITAHLHTR--DKAKALAKAL---GYFQKMKGMERCKPNIVTYNILLR 228
CRP YN LI+ + D+AK L G+ P++VTY+IL
Sbjct: 325 RNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFV----------PDVVTYSILAD 374
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
+ +D+ L KE+ P++ TYN ++D K ++ +L + S+ P
Sbjct: 375 GLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVP 434
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
D++T+ +++D K DK ++ + ++ P++ T+ +++ + +A ++F
Sbjct: 435 DVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIF 494
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
++M + T + Y ++ GYC + SR +E + + + NA+++ YC
Sbjct: 495 KEMVSKDCTADALAYVSLVN--GYCKS-SRTKEAQKVVDGIRGTPYIDVYNALMDGYCKE 551
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G E +FE+ G P+ TY ++ K + L+ M G VP+
Sbjct: 552 GRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPD 607
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 150/345 (43%), Gaps = 10/345 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ + L K + + L++ M K R Y+ L+ + + G+ A +F EM +
Sbjct: 441 IIVDGLCKEGRLDKALKMVEGMLK-RGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVS 499
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
C D Y +L+ + + +A QK+ R P I YN L+ +
Sbjct: 500 KDCTADALAYVSLVNGYCKSSRTKEA--------QKVVDGIRGTPYIDVYNALMDGYCKE 551
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+D++ +F+++ P+I TYN VMD K+G + E L M S C PD++++
Sbjct: 552 GRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSY 611
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N++ID K + QV ++ + P T+N+++ + K A + + M
Sbjct: 612 NIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIK 671
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV-STLNAMLEAYCMNGLPT 412
P +TY +I+ + + A E+ E+ + G + +T N +++ C G
Sbjct: 672 AGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLK 731
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
+A LL ++ GV ++ TY + K + LL M+
Sbjct: 732 QALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD 776
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 153/359 (42%), Gaps = 18/359 (5%)
Query: 109 SEHCFL-LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWL 167
+ +CFL E G SD+ E R + Y D+ Y +I + + Q A +
Sbjct: 127 TRNCFLQTLLENGSSDRIPAMFE--RMLDA--GYAPDSYTYHLVIKSLCQMNQIDKAFTM 182
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
+ + G +P+ SVY L A K L AL F+ + P+ + YN ++
Sbjct: 183 LDKAKVRGFKPEVSVYTILTRAFC----KTGRLKDALEIFRNIP-----SPDAIAYNAII 233
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
+ + D KE++E +APD++TYN ++D K + +L M
Sbjct: 234 HGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVT 293
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
PD +TFN ++D K F++ + + +P+ T+N++I K + +A+ +
Sbjct: 294 PDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDL 353
Query: 348 FQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+ + + P +TY I G C + A E+ E+S G + T N +++
Sbjct: 354 VDEFVSSGFVPDVVTYS--ILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGL 411
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
C +A L E+ + G PD TY ++ K + K+++ M + G P+
Sbjct: 412 CKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPS 470
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 144/357 (40%), Gaps = 43/357 (12%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKA- 199
++ D YS L + K+G+ A L EM GC P+ YN LI KA
Sbjct: 362 FVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAY 421
Query: 200 ------------------------------LAKALGYFQKMKGMER-CKPNIVTYNILLR 228
L KAL + M ++R C P+++TY L+
Sbjct: 422 ELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGM--LKRGCTPSVITYTALME 479
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
+ VD+ + +FKE+ D Y +++ Y K+ KE + V+ ++ P
Sbjct: 480 GLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT---P 536
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
I +N L+D Y K D++ VF+ + P + T+N ++ K GK + F
Sbjct: 537 YIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCK---HGKVDEAF 593
Query: 349 ---QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+ M + P ++Y II AR++ D++ + G T N ++ +
Sbjct: 594 PFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQF 653
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
C +A + +N GV PD+ TY L ++ N +L+ M +NG V
Sbjct: 654 CKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCV 710
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 150/384 (39%), Gaps = 43/384 (11%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L E L ++ + + +F+ M + AD Y L+ K +T+ A + +R +
Sbjct: 477 LMEGLCRTGRVDEAHHIFKEMVSKDC-TADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT 535
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
P VYNAL+ + K L + F+ M C PNI TYNI++ +
Sbjct: 536 ---PYIDVYNALMDGYC----KEGRLDEIPNVFEDM-ACRGCVPNIKTYNIVMDGLCKHG 587
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
VD+ + +H + PD+ +YN ++D K KE VL +M PD +T+N
Sbjct: 588 KVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYN 647
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA-EYVFQKMTA 353
L+ + K + FD + K+++ + P T+N++I + G A E + + +
Sbjct: 648 TLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRN 707
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
+ TY II + +A + D ++ G + T N ++ C G E
Sbjct: 708 GCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDE 767
Query: 414 ADLLFENSHNM---------------------------------GVTPDSSTYKLLYKAY 440
A L + G+ S T+ LL A+
Sbjct: 768 ASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAF 827
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
TK + LL M Q G P+
Sbjct: 828 TKTKRLDEALTLLGLMVQRGCSPS 851
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 125/314 (39%), Gaps = 43/314 (13%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ D Y+ +I + K + + A + +M +G PD YN L+ K +
Sbjct: 605 VPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFC----KEERFD 660
Query: 202 KALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKE-LHESILAPDIYTY 258
A+G + M G++ P+ VTYN L+ +Q + L E L + TY
Sbjct: 661 DAVGILKNMIKAGVD---PDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTY 717
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD----------- 307
N ++D K G +K+ ++ M + + + +T+N+ ID K D
Sbjct: 718 NTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDT 777
Query: 308 ---------------KMEQVFKSLMHSKEKPTLP-------TFNSMIINYGKARLQGKAE 345
K EQ+ ++ ++E + TFN +I + K + +A
Sbjct: 778 LRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEAL 837
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+ M +PS ITY +IT D V +A E+FDE++ G + ++
Sbjct: 838 TLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGL 897
Query: 406 CMNGLPTEADLLFE 419
C G EA + E
Sbjct: 898 CGQGRGKEALQVLE 911
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 118/318 (37%), Gaps = 74/318 (23%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD------------- 263
K + T N L+ + + D++ A+F+ + ++ APD YTY+ V+
Sbjct: 122 KHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFT 181
Query: 264 ----------------------AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
A+ K G +K+ + + S PD I +N +I +
Sbjct: 182 MLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----PDAIAYNAIIHGHC 237
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
++ D + K + K P + T+N +I KA KA + +M TP +
Sbjct: 238 RKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTV 297
Query: 362 TYECIIT---------------------------------MYGYC--DNVSRAREIFDEL 386
T+ I+ + G C NV RA+++ DE
Sbjct: 298 TFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEF 357
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
G V T + + + C G EA L + G TP+ TY L KA+
Sbjct: 358 VSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKT 417
Query: 447 ELVQKLLKRMEQNGIVPN 464
E +LL+ + +G VP+
Sbjct: 418 EKAYELLESLVSSGFVPD 435
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 87/203 (42%), Gaps = 9/203 (4%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L ++++ E+ M + ++ Y+ +I + K+G + A+ L M
Sbjct: 684 LISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGH 743
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G + YN I K L +A +M + + V+Y ++ +A
Sbjct: 744 GVEANTVTYNIFIDRLC----KEGRLDEASSLLSEMDTLR----DEVSYTTVIIGLCKAE 795
Query: 235 NVDQVNALFKELHE-SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+D+ + L +E+ L +T+N ++DA+ K + E ++L M C P +IT+
Sbjct: 796 QLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITY 855
Query: 294 NLLIDSYGKRQAFDKMEQVFKSL 316
N++I K DK ++F +
Sbjct: 856 NMVITCLCKLDKVDKAWELFDEM 878
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 183 YNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNA 241
+N LI A K K L +AL M ++R C P+++TYN+++ + VD+
Sbjct: 820 FNLLIDAFT----KTKRLDEALTLLGLM--VQRGCSPSVITYNMVITCLCKLDKVDKAWE 873
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
LF E+ + +Y ++ G KE VL M S+ C+ D
Sbjct: 874 LFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEID 921
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 148/330 (44%), Gaps = 10/330 (3%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
IY+ LI KKG+ A LF EM G + Y LI K +
Sbjct: 200 IYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFE----M 255
Query: 207 FQKMKGMERCKPNIVTYNILL-RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
++KM+ + PN+ TYN ++ + C R D +F E+ E ++ +I TYN ++
Sbjct: 256 YEKMQ-EDGVFPNLYTYNCVMNQLCKDGRTKDAFQ-VFDEMRERGVSCNIVTYNTLIGGL 313
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ + E V+ +MKS+ P++IT+N LID + K + + L P+L
Sbjct: 314 CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+N ++ + + A + ++M PS +TY +I + DN+ +A ++
Sbjct: 374 VTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS 433
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ +LG V T + ++ +C+ G EA LF++ P+ Y + Y K
Sbjct: 434 MEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGS 493
Query: 446 KELVQKLLKRMEQNGIVPNK---RFFLEAL 472
KLLK ME+ + PN R+ +E L
Sbjct: 494 SYRALKLLKEMEEKELAPNVASYRYMIEVL 523
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 142/315 (45%), Gaps = 10/315 (3%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
Q E++ MQ+ + + Y+ ++ + K G+T+ A +F EMR G + YN L
Sbjct: 251 QGFEMYEKMQEDGVF-PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTL 309
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I + L +A +MK + PN++TYN L+ + + +L ++L
Sbjct: 310 IGGLC----REMKLNEANKVVDQMKS-DGINPNLITYNTLIDGFCGVGKLGKALSLCRDL 364
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
L+P + TYN ++ + + G ++ M+ KP +T+ +LID++ +
Sbjct: 365 KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNM 424
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+K Q+ S+ P + T++ +I + +A +F+ M P+ + Y +
Sbjct: 425 EKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTM 484
Query: 367 ITMYGYCDNVS--RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
I GYC S RA ++ E+ + V++ M+E C EA+ L E +
Sbjct: 485 I--LGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDS 542
Query: 425 GVTPDSSTYKLLYKA 439
G+ P +S L+ +A
Sbjct: 543 GIDPSTSILSLISRA 557
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 154/334 (46%), Gaps = 10/334 (2%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y +I + L++ F+EM ++G P + +N L+T + + + + +
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVV----GSSSFNQWWSF 151
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F + K + ++ ++ IL++ C +A +++ L EL E +P++ Y ++D
Sbjct: 152 FNENK--SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCC 209
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K G I++ + + M + T+ +LI+ K + ++++ + P L
Sbjct: 210 KKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFD 384
T+N ++ K A VF +M + + +TY +I G C ++ A ++ D
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIG--GLCREMKLNEANKVVD 327
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
++ G + + T N +++ +C G +A L + + G++P TY +L + +
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKG 387
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
K++K ME+ GI P+K + ++TF+ S
Sbjct: 388 DTSGAAKMVKEMEERGIKPSKVTYTILIDTFARS 421
>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 666
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 146/326 (44%), Gaps = 19/326 (5%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH--LHTRDKAKALA 201
D IYS +I + K G A +LFSEM G P+ YN +I A+ L
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Query: 202 KALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+ + +ER P+++T+N L+ A + + + L E+ + PD TYN
Sbjct: 355 RDM--------IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNS 406
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ + K+ + + + M S PD++TFN +ID Y + + D+ Q+ + +
Sbjct: 407 MIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG 462
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSR 378
T+N++I + + A+ +FQ+M + P IT C I +YG+C+N +
Sbjct: 463 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT--CNILLYGFCENEKLEE 520
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A E+F+ + D+ N ++ C EA LF + GV PD TY ++
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPN 464
+ + L +M+ NG P+
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPD 606
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 168/352 (47%), Gaps = 26/352 (7%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y ++ M K G T+ A+ L S+M + +PD +Y+A+I +D + A+
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL--CKDGHHSDAQY 317
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNG 260
L F +M KG+ PN+ TYN ++ C+ R D L +++ E + PD+ T+N
Sbjct: 318 L--FSEMLEKGI---APNVFTYNCMIDGFCSFGRWSD-AQRLLRDMIEREINPDVLTFNA 371
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ A K G + E E + M PD +T+N +I + K FD + +F LM S
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMAS- 429
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSR 378
P + TFN++I Y +A+ + + ++++ + TY +I +G+C DN++
Sbjct: 430 --PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI--HGFCEVDNLNA 485
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A+++F E+ G T N +L +C N EA LFE + D+ Y ++
Sbjct: 486 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTD 490
K + + L + +G+ P+ ++T++ ++G SA +D
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPD-------VQTYNVMISGFCGKSAISD 590
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 142/315 (45%), Gaps = 11/315 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ LI + +G+ A L ++M G D Y ++ D AL
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL----NLL 284
Query: 208 QKMKGMERCKPNIVTYN-ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
KM+ KP++V Y+ I+ R C + D LF E+ E +AP+++TYN ++D +
Sbjct: 285 SKMEE-THIKPDVVIYSAIIDRLCKDGHHSD-AQYLFSEMLEKGIAPNVFTYNCMIDGFC 342
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
G + + +L M + PD++TFN LI + K + E++ ++H P
Sbjct: 343 SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 402
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T+NSMI + K A+++F M +P +T+ II +Y V ++ E+
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREI 458
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
S+ G +T N ++ +C A LF+ + GV PD+ T +L + +
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Query: 447 ELVQKLLKRMEQNGI 461
E +L + ++ + I
Sbjct: 519 EEALELFEVIQMSKI 533
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 138/341 (40%), Gaps = 53/341 (15%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W + R M +R D ++ LI+ K+G+ A L EM + PD Y
Sbjct: 346 RWSDAQRLLRDMI-EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTY 404
Query: 184 NALITAHL-HTR-DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
N++I H R D AK + + P++VT+N ++ +A+ VD+
Sbjct: 405 NSMIYGFCKHNRFDDAKHMFDLMA-----------SPDVVTFNTIIDVYCRAKRVDEGMQ 453
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
L +E+ L + TYN ++ + + + + + M S+ PD IT N+L+ +
Sbjct: 454 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
+ + ++ ++F+ + SK +N
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAYN-------------------------------- 541
Query: 362 TYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
I ++G C V A ++F L G + V T N M+ +C ++A++LF
Sbjct: 542 -----IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 596
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+ G PD+STY L + KA + +L+ M NG
Sbjct: 597 KMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 150/351 (42%), Gaps = 25/351 (7%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
++ F +M + R + +K+I V + + +A+ L+ +M + +N LI
Sbjct: 91 IDFFDYMVRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIK 149
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVD---------- 237
L+ +L F K+ + +P++VT+N LL C + R +
Sbjct: 150 CFC----DCHKLSFSLSTFGKLTKLGF-QPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 238 ----QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ ALF ++ E L P + T+N +++ G + E +++++M D++T+
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+++ K + + + KP + ++++I K A+Y+F +M
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 354 MKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P+ TY C+I G+C S A+ + ++ + + V T NA++ A G
Sbjct: 325 KGIAPNVFTYNCMID--GFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 382
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
EA+ L + + + PD+ TY + + K N + + + M +V
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVV 433
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 6/168 (3%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM 171
C +L +++K + LE+F +Q + + DT Y+ +I M K + A LF +
Sbjct: 505 CNILLYGFCENEKLEEALELFEVIQMSKIDL-DTVAYNIIIHGMCKGSKVDEAWDLFCSL 563
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
G PD YN +I+ A++ A F KMK +P+ TYN L+R C
Sbjct: 564 PIHGVEPDVQTYNVMISGFC----GKSAISDANVLFHKMKDNGH-EPDNSTYNTLIRGCL 618
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+A +D+ L E+ + + D +T V D + K +LS
Sbjct: 619 KAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRLDKSFSDMLS 666
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 104/265 (39%), Gaps = 27/265 (10%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A+ ++KM+ + R NI ++NIL++ + + F +L + PD+ T+N ++
Sbjct: 125 AISLYRKME-IRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLL 183
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
C D I+ L + Y F + +F ++
Sbjct: 184 HGL--------------------CLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT 223
Query: 323 PTLPTFNSMIINYGKARLQGK---AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
P + TFN++I L+G+ A + KM +TY I+ + A
Sbjct: 224 PVVITFNTLI---NGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 280
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+ ++ + V +A+++ C +G ++A LF G+ P+ TY +
Sbjct: 281 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 340
Query: 440 YTKANMKELVQKLLKRMEQNGIVPN 464
+ Q+LL+ M + I P+
Sbjct: 341 FCSFGRWSDAQRLLRDMIEREINPD 365
>gi|255661188|gb|ACU25763.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
Length = 426
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 142/308 (46%), Gaps = 7/308 (2%)
Query: 134 WMQK--QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
W+QK Q D +YS LI + K A+ +FS ++ SG PD YNA+I
Sbjct: 31 WLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVF- 89
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KAK +A +M+ PN +Y+ LL + + + ++F E+ E
Sbjct: 90 ---GKAKLFREARSLISEMR-TAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIKC 145
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
D+ T N ++D YG+ GM KE + + M+ +P+++++N L+ YG + F +
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 205
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+F+ + + T+NSM++ YGK KA + Q+M P+ ITY II+++G
Sbjct: 206 LFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWG 265
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ RA +F +L G ++ M+ AY GL A L + P +
Sbjct: 266 KVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKSPDNIPRDT 325
Query: 432 TYKLLYKA 439
+L A
Sbjct: 326 AIHILAGA 333
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 153/327 (46%), Gaps = 5/327 (1%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
+QR D YS LI GK+G A+ +M D +Y+ LI D
Sbjct: 1 RQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+KA++ F ++K P++V YN ++ +A+ + +L E+ + + P+
Sbjct: 61 SKAIS----IFSRLK-RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTA 115
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+Y+ ++ Y +N E SV S M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 116 SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 175
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P + ++N+++ YG A L G+A ++F+ M + +TY ++ +YG
Sbjct: 176 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEH 235
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A + E+ G + T + ++ + G A +LF+ + GV D Y+ +
Sbjct: 236 EKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTM 295
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVP 463
AY +A + ++LL ++ +P
Sbjct: 296 IVAYERAGLVAHAKRLLHELKSPDNIP 322
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 107/214 (50%)
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
L+PD YTY+ ++ +GK G+ S L +M+ ++ D++ ++ LI+ K + K
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 64
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+F L S P L +N+MI +GKA+L +A + +M P+ +Y ++TMY
Sbjct: 65 SIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMY 124
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
A +F E+ ++ + ++T N M++ Y G+ EAD LF MG+ P+
Sbjct: 125 VENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+Y L + Y A + L + M++ IV N
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQN 218
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 151/360 (41%), Gaps = 42/360 (11%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L SEMR +G P+ + Y+ L+T ++
Sbjct: 71 KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVEN--- 127
Query: 197 AKALAKALGYFQKMK--------------------------------GMER--CKPNIVT 222
K +AL F +M+ GM + +PN+V+
Sbjct: 128 -KKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
YN LLR A + LF+ + + ++ TYN +M YGK ++ +++ M+
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQ 246
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
+ +P+ IT++ +I +GK D+ +F+ L S + + +MI+ Y +A L
Sbjct: 247 NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVA 306
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
A+ + ++ +P I + I + + A +F + G+ ++ M+
Sbjct: 307 HAKRLLHELK----SPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMI 362
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+ +F+ +G PDS+ L+ AY K + + + M++ G V
Sbjct: 363 HLFSKYKKYANLIEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANGVYMEMQEVGCV 422
>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 482
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 152/342 (44%), Gaps = 14/342 (4%)
Query: 146 GIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALG 205
I ++ A MGK + A+ +F M GC D S +N + L K+K + A
Sbjct: 131 AIIAERYAAMGKPHR---AVTVFMSMHEYGCFQDLSSFNTI----LDVLCKSKRVEMAYN 183
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
F+ +KG + K + V+YNI++ + + + KE+ E L P++ TYN +++ Y
Sbjct: 184 LFKALKG--KFKADCVSYNIIVNGWCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGY 241
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ G E MK +C D++T+ +I G + VF ++ P++
Sbjct: 242 FRAGQTNEAWGFFLEMKKRKCDIDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSV 301
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
TFN++I K A +F++M Y P+ ITY +I + + RA E+ +
Sbjct: 302 ATFNALIQILCKKDSVENAILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMER 361
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA-YTKAN 444
+ + V T N ++ +C G + LF+ N P+ TY +L + + + N
Sbjct: 362 MEDDDCEPNVQTYNILIRYFCDAGEIEKGLDLFQKMGNGDCLPNLDTYNILINSMFVRKN 421
Query: 445 MKELV--QKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQS 484
L+ KLL M G +P K F L+ L G+Q
Sbjct: 422 SDNLLVAGKLLVEMVDRGFLPRKLTFNRVLDGL--LLTGNQD 461
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 121/313 (38%), Gaps = 41/313 (13%)
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
KAL +F+ + +++ + CA+ R+ + L + L P T+ +
Sbjct: 74 KALHFFKILSHHPSYCHQASSFDHAIDICARLRDFRTLWFLVSRMRSCRLGPSPRTFAII 133
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL----- 316
+ Y G +V M C D+ +FN ++D K + + +FK+L
Sbjct: 134 AERYAAMGKPHRAVTVFMSMHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKALKGKFK 193
Query: 317 -----------------------------MHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
+ P L T+N M+ Y +A +A
Sbjct: 194 ADCVSYNIIVNGWCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGF 253
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F +M K +TY +I G + RAR +F+++ K G V+T NA+++ C
Sbjct: 254 FLEMKKRKCDIDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCK 313
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK-- 465
A L+FE G P+S TY L+ + + +L++RME + PN
Sbjct: 314 KDSVENAILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQT 373
Query: 466 -----RFFLEALE 473
R+F +A E
Sbjct: 374 YNILIRYFCDAGE 386
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 83/193 (43%), Gaps = 32/193 (16%)
Query: 95 PLVRTLNKYVKVV----RSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSK 150
P V T N ++++ E+ L+FEE+ K R Y+ ++ Y+
Sbjct: 299 PSVATFNALIQILCKKDSVENAILIFEEMVK-----------------RGYVPNSITYNL 341
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
+I + G+ + AM L M + C P+ YN LI A + K L FQKM
Sbjct: 342 VIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFC----DAGEIEKGLDLFQKM 397
Query: 211 KGMERCKPNIVTYNILLRACAQARNVDQV---NALFKELHESILAPDIYTYNGVMDAY-- 265
G C PN+ TYNIL+ + +N D + L E+ + P T+N V+D
Sbjct: 398 -GNGDCLPNLDTYNILINSMFVRKNSDNLLVAGKLLVEMVDRGFLPRKLTFNRVLDGLLL 456
Query: 266 -GKNGMIKEMESV 277
G KE+ S+
Sbjct: 457 TGNQDFAKEILSL 469
>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 143/317 (45%), Gaps = 5/317 (1%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
L+ + G+ LA L + G + + VYNALI KA+ + F
Sbjct: 195 LVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMK--IKAFMSR 252
Query: 211 KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
G C P++VTYNILL C + VD+ L + + S + PD+Y+YN ++ + K M
Sbjct: 253 TG---CVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANM 309
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
+ ++ + D++++N +I ++ K + K ++F+ + +P + TFN
Sbjct: 310 VDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNI 369
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
+I + + + + +MT M+ P I Y ++ V A +F ++ + G
Sbjct: 370 LIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENG 429
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
+ V + NA+L +C +A LF+ + G+ PD TYKL+ + L
Sbjct: 430 VNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLAC 489
Query: 451 KLLKRMEQNGIVPNKRF 467
++ +M + G N+
Sbjct: 490 RVWDQMMERGFTLNRHL 506
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 136/296 (45%), Gaps = 16/296 (5%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
F +G+ DK ++ + + + D Y+ L+ ++G A+ L M SG
Sbjct: 234 FCRMGRVDKAMK----IKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSG 289
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKA-LGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
PD YN L+ KA + +A L ++M+ C ++V+YN ++ A +AR
Sbjct: 290 VEPDLYSYNELLKGFC----KANMVDRAHLMMVERMQTKGMC--DVVSYNTVITAFCKAR 343
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ LF+E+ + PD+ T+N ++DA+ + G ++ +L M + PD I +
Sbjct: 344 RTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYT 403
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++D K D VF+ ++ + P + ++N+++ + K A ++F +M +
Sbjct: 404 AVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSK 463
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
P +TY+ I+ +S A ++D++ + G TLN L +N +
Sbjct: 464 GLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERG-----FTLNRHLSETLVNAI 514
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 139/320 (43%), Gaps = 12/320 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL-HTRDKAKALAKALGY 206
Y I+ + K G A++LF +M S CR YN I L H+R L A Y
Sbjct: 13 YRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSR-----LHLAHHY 67
Query: 207 FQKMKGMERCKPNIVTYNILLRA-CAQARNVDQ--VNALFKELHESILAPDIYTYNGVMD 263
+++ TY+ + A C+ N++ +++L ++ PDI+ +N ++
Sbjct: 68 YRRHVIPRGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLN 127
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ ++ + M S PD++++ ++ID+ + FD+ +V++ L+ P
Sbjct: 128 LLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSP 187
Query: 324 TLPTFNSMIINY-GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
++++ R+ E V + S + Y +I + V +A +I
Sbjct: 188 DYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLV-YNALIDGFCRMGRVDKAMKI 246
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+S+ G + T N +L C G+ EA L E GV PD +Y L K + K
Sbjct: 247 KAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCK 306
Query: 443 ANMKELVQ-KLLKRMEQNGI 461
ANM + +++RM+ G+
Sbjct: 307 ANMVDRAHLMMVERMQTKGM 326
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 152/340 (44%), Gaps = 33/340 (9%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ +I M K A L+SEM + G P+ Y+ALI+ L A+
Sbjct: 197 MYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFF----VVGKLKDAIDL 252
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F K+ +E KP+ T+NIL+ + R + + +F + + + PD+ TYN +MD Y
Sbjct: 253 FNKII-LENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYC 311
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK-PTL 325
+ +S+ + M PDI ++N+LI+ + K + DK +F MH K P +
Sbjct: 312 LVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNE-MHCKNIIPNV 370
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECIITMYGYCDNVSRAREI 382
T+NS+I K+ G+ Y Q + M P+ +TY II V +A +
Sbjct: 371 VTYNSLIDGLSKS---GRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIAL 427
Query: 383 F-------------------DELSKL-GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
D L K+ G D+ V+T N M+ +C GL EA L
Sbjct: 428 ITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMK 487
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+ P++ TY++ ++ N + +KL + M G++
Sbjct: 488 DSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLL 527
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 135/298 (45%), Gaps = 9/298 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + K G+TR A+ L + + + +YN +I K K + A +
Sbjct: 163 YGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMC----KDKHVNDAFDLY 218
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M KG+ PN+VTY+ L+ + LF ++ + PD YT+N ++D +
Sbjct: 219 SEMVSKGIS---PNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGF 275
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K+ +KE ++V + M PD++T+N L+D Y + + + +F ++ P +
Sbjct: 276 CKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDI 335
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
++N +I + K + KA +F +M P+ +TY +I +S A ++ D+
Sbjct: 336 RSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQ 395
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ G + T N++++A +A L + G+ P TY +L K
Sbjct: 396 MHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKV 453
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 134/304 (44%), Gaps = 5/304 (1%)
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
Q A ++ G D Y LI H K AL Q++ G + + N
Sbjct: 140 QIHQAFLFHDKLVALGFHLDQVSYGTLI----HGLCKVGETRAALDLLQRVDG-KLVQLN 194
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
V YN ++ + ++V+ L+ E+ ++P++ TY+ ++ + G +K+ + +
Sbjct: 195 AVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFN 254
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
++ KPD TFN+L+D + K + + + VF +M P + T+NS++ Y +
Sbjct: 255 KIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVK 314
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLN 399
A+ +F M P +Y +I + V +A +F+E+ V T N
Sbjct: 315 EVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYN 374
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
++++ +G + A L + H+ GV P+ TY + A K + + L+ + +
Sbjct: 375 SLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQ 434
Query: 460 GIVP 463
GI P
Sbjct: 435 GIQP 438
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 114/275 (41%), Gaps = 32/275 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + K K + VF M KQ I D Y+ L+ + A +F+ M
Sbjct: 270 ILVDGFCKDRKMKEGKTVFAMMMKQ-GIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQ 328
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCK---PNIVTYNILLRAC 230
G PD YN LI K K + KA+ F +M CK PN+VTYN L+
Sbjct: 329 GGVNPDIRSYNILINGFC----KIKKVDKAMNLFNEM----HCKNIIPNVVTYNSLIDGL 380
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP-- 288
+++ + L ++H+ + P+I TYN ++DA K + + +++++ K +P
Sbjct: 381 SKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSM 440
Query: 289 ----------------DII--TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
DI T+N++I + K+ FD+ + + S P T+
Sbjct: 441 YTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEI 500
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
I + KAE +F++M +Y C
Sbjct: 501 TIRSLLDNNENDKAEKLFREMITRGLLNRSASYPC 535
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 137/330 (41%), Gaps = 23/330 (6%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ LF+ + P +N ++ + + K+K L QKM+ KPN+
Sbjct: 70 AVSLFNRLLRQNPTPPAFEFNKILGSLV----KSKHYHTVLSLSQKME-FRGIKPNLFNC 124
Query: 224 NILLRACAQARNVD-QVNALFKELHESILAP----DIYTYNGVMDAYGKNGMIKEMESVL 278
NIL+ Q + Q++ F H+ ++A D +Y ++ K G + +L
Sbjct: 125 NILIYCFCQLGLIPCQIHQAFL-FHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLL 183
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
R+ + + + +N +I K + + ++ ++ P + T++++I +
Sbjct: 184 QRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVV 243
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVS 396
A +F K+ P T+ ++ G+C + + + +F + K G V
Sbjct: 244 GKLKDAIDLFNKIILENIKPDGYTFNILVD--GFCKDRKMKEGKTVFAMMMKQGIIPDVV 301
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
T N++++ YC+ A +F GV PD +Y +L + K + L M
Sbjct: 302 TYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEM 361
Query: 457 EQNGIVPNKRFFLEALETFSSSLAG-SQSG 485
I+PN + T++S + G S+SG
Sbjct: 362 HCKNIIPN-------VVTYNSLIDGLSKSG 384
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/289 (20%), Positives = 115/289 (39%), Gaps = 39/289 (13%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
K N ++Y+ +VD +LF L P + +N ++ + K+ + S
Sbjct: 48 KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLS 107
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGK--------RQAF---DK-------MEQV-FKSLM 317
+ +M+ KP++ N+LI + + QAF DK ++QV + +L+
Sbjct: 108 LSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLI 167
Query: 318 HS---------------KEKPTLPTFNSMIIN---YG--KARLQGKAEYVFQKMTAMKYT 357
H + L N+++ N YG K + A ++ +M + +
Sbjct: 168 HGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGIS 227
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P+ +TY +I+ + + A ++F+++ T N +++ +C + E +
Sbjct: 228 PNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTV 287
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
F G+ PD TY L Y + + M Q G+ P+ R
Sbjct: 288 FAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIR 336
>gi|255661192|gb|ACU25765.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 426
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 142/308 (46%), Gaps = 7/308 (2%)
Query: 134 WMQK--QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
W+QK Q D +YS LI + K A+ +FS ++ SG PD YN++I
Sbjct: 31 WLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFAPDLVAYNSMINVF- 89
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KAK +A +M+ P+ V+Y LL + + + ++F E+ E
Sbjct: 90 ---GKAKLFREARSLINEMR-TAGVMPDTVSYTTLLTMHVENKRFLEALSVFAEMREIKC 145
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
D+ T N ++D YG+ GM KE + + M+ +P+++++N L+ YG + F +
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPNVVSYNTLLRVYGDAELFGEAIH 205
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+F+ + + + T+NSM++ YGK KA + Q+M P+ ITY II+++G
Sbjct: 206 LFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWG 265
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ RA +F +L G ++ M+ AY GL A L P +
Sbjct: 266 KVGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDT 325
Query: 432 TYKLLYKA 439
+L A
Sbjct: 326 AIHILAAA 333
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 150/320 (46%), Gaps = 5/320 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS LI GK+G A+ +M D +Y+ LI D +KA++
Sbjct: 8 DRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS-- 65
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F ++K P++V YN ++ +A+ + +L E+ + + PD +Y ++
Sbjct: 66 --IFSRLK-RSGFAPDLVAYNSMINVFGKAKLFREARSLINEMRTAGVMPDTVSYTTLLT 122
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ +N E SV + M+ +C D+ T N++ID YG+ + +++F + +P
Sbjct: 123 MHVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEP 182
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ ++N+++ YG A L G+A ++F+ M + +TY ++ +YG +A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
E+ G + T + ++ + G A +LF+ N GV D Y+ + AY +A
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVAYERA 302
Query: 444 NMKELVQKLLKRMEQNGIVP 463
+ ++LL +++ +P
Sbjct: 303 GLVAHAKRLLHELKRPDNIP 322
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 106/214 (49%)
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
L+PD YTY+ ++ +GK G+ S L +M+ ++ D++ ++ LI+ K + K
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 64
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+F L S P L +NSMI +GKA+L +A + +M P ++Y ++TM+
Sbjct: 65 SIFSRLKRSGFAPDLVAYNSMINVFGKAKLFREARSLINEMRTAGVMPDTVSYTTLLTMH 124
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
A +F E+ ++ + ++T N M++ Y G+ EAD LF +G+ P+
Sbjct: 125 VENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPNV 184
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+Y L + Y A + L + M++ I N
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 145/358 (40%), Gaps = 42/358 (11%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L +EMR +G PD Y L+T H+
Sbjct: 71 KRSGFAPDLVAYNSMINVFGKAKLFREARSLINEMRTAGVMPDTVSYTTLLTMHVEN--- 127
Query: 197 AKALAKALGYFQKMK--------------------------------GMERC--KPNIVT 222
K +AL F +M+ GM + +PN+V+
Sbjct: 128 -KRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPNVVS 186
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
YN LLR A + LF+ + + ++ TYN +M YGK ++ +++ M+
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQ 246
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
+ +P+ IT++ +I +GK D+ +F+ L +S + + +MI+ Y +A L
Sbjct: 247 NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVAYERAGLVA 306
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
A+ + ++ P I + I + + A +F + G+ ++ ++
Sbjct: 307 HAKRLLHELK----RPDNIPRDTAIHILAAAGRJEEATWVFRQAIDAGEVKDITVFERLI 362
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+ +F+ PDS+ L+ AY K + E + M+ G
Sbjct: 363 HLFSKYKKYXNVVEVFDKMRERRYFPDSNVIALVLNAYGKLHEFEKANSVYMEMQDEG 420
>gi|147771903|emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera]
Length = 1313
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 164/367 (44%), Gaps = 41/367 (11%)
Query: 145 TGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKAL 204
T Y+ LI + GK G+ + A +F+EM G D +N +I +T L++A
Sbjct: 650 TATYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMI----YTCGSHGHLSEAE 705
Query: 205 GYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+M+ ER P+ TYNI L A N+D ++++ E L PD+ T+ V+
Sbjct: 706 TLLTEME--ERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIREVGLFPDVVTHRAVLH 763
Query: 264 AYGKNGMIKEMESVLSRMKSNQCK------PDIITFNL---------------------- 295
+ M+ E+E+V++ MK ++ + P +I +
Sbjct: 764 VLCERNMVGEVETVIAEMKRSRVRVDEHSIPVVIKMYVNEGLLDKAKIFLEEHLLEDELS 823
Query: 296 ------LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
+ID+Y ++ + + E VF +K + +N M+ YGKA+L KA +F+
Sbjct: 824 SRTRVAIIDAYAEKGLWAEAENVFIGKRDLGQKKDVVEYNVMVKAYGKAKLYDKAFSLFK 883
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
M P+ TY +I M+ D V AR+I E+ K+G + T +A++ Y G
Sbjct: 884 GMRNHGTWPNESTYNSLIQMFSGGDLVDEARDILAEMQKMGFKPQCLTFSAVIACYARLG 943
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFL 469
+A ++E +GV P+ Y L +++ E ++M++ GI N+
Sbjct: 944 RLPDAVGVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEALCYFRKMDEFGISANQIVLT 1003
Query: 470 EALETFS 476
++ +S
Sbjct: 1004 SLIKAYS 1010
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 155/378 (41%), Gaps = 40/378 (10%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + GK+ + +VF M K DT ++ +I G G A L +EM
Sbjct: 656 LIDLYGKAGRLKDAADVFAEMLKLG-VAMDTITFNTMIYTCGSHGHLSEAETLLTEMEER 714
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G PD YN ++ + + + AL ++K++ + P++VT+ +L +
Sbjct: 715 GISPDTKTYNIFLSLYADGGN----IDAALKCYRKIREV-GLFPDVVTHRAVLHVLCERN 769
Query: 235 NVDQVNALFKELHESILAPD---------IYTYNG------------------------- 260
V +V + E+ S + D +Y G
Sbjct: 770 MVGEVETVIAEMKRSRVRVDEHSIPVVIKMYVNEGLLDKAKIFLEEHLLEDELSSRTRVA 829
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++DAY + G+ E E+V + K D++ +N+++ +YGK + +DK +FK + +
Sbjct: 830 IIDAYAEKGLWAEAENVFIGKRDLGQKKDVVEYNVMVKAYGKAKLYDKAFSLFKGMRNHG 889
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P T+NS+I + L +A + +M M + P +T+ +I Y + A
Sbjct: 890 TWPNESTYNSLIQMFSGGDLVDEARDILAEMQKMGFKPQCLTFSAVIACYARLGRLPDAV 949
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+++E+ +LG +++ + G EA F G++ + L KAY
Sbjct: 950 GVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEALCYFRKMDEFGISANQIVLTSLIKAY 1009
Query: 441 TKANMKELVQKLLKRMEQ 458
+K E + L + M+
Sbjct: 1010 SKVGCLEGAKTLYEGMKD 1027
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 121/284 (42%), Gaps = 21/284 (7%)
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+ L F+ +K E PN++ YN++LR +A+ D++ + E+ ++ + P TY +
Sbjct: 471 RVLRVFEWIKSQEDYVPNVIHYNVVLRVLGRAQKWDELRLCWIEMAKNGVLPTNNTYGML 530
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK- 320
+D YGK G++KE + MK PD +T N ++ FD ++ ++ K
Sbjct: 531 VDVYGKAGLVKEALLWIKHMKLRGVFPDEVTMNTVVRVLKDAGEFDWADRFYRDWCVGKV 590
Query: 321 ---------------EKPTLPTFNSMIINYGKARLQGKAEYV----FQKMTAMKYTPSFI 361
E + P ++ ++ G+ ++ P
Sbjct: 591 ELGDFDLESVADSDDEIGSAPVSLKHFLSTELFKIGGRRPISNIMDSSNTDGSRHKPRLT 650
Query: 362 -TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
TY +I +YG + A ++F E+ KLG M T N M+ +G +EA+ L
Sbjct: 651 ATYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIYTCGSHGHLSEAETLLTE 710
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G++PD+ TY + Y + K +++ + G+ P+
Sbjct: 711 MEERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIREVGLFPD 754
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 121/265 (45%), Gaps = 2/265 (0%)
Query: 215 RCKPNI-VTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
R KP + TYN L+ +A + +F E+ + +A D T+N ++ G +G + E
Sbjct: 644 RHKPRLTATYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIYTCGSHGHLSE 703
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
E++L+ M+ PD T+N+ + Y D + ++ + P + T +++
Sbjct: 704 AETLLTEMEERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIREVGLFPDVVTHRAVLH 763
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
+ + G+ E V +M + + +I MY + +A+ IF E L ++
Sbjct: 764 VLCERNMVGEVETVIAEMKRSRVRVDEHSIPVVIKMYVNEGLLDKAK-IFLEEHLLEDEL 822
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
T A+++AY GL EA+ +F ++G D Y ++ KAY KA + + L
Sbjct: 823 SSRTRVAIIDAYAEKGLWAEAENVFIGKRDLGQKKDVVEYNVMVKAYGKAKLYDKAFSLF 882
Query: 454 KRMEQNGIVPNKRFFLEALETFSSS 478
K M +G PN+ + ++ FS
Sbjct: 883 KGMRNHGTWPNESTYNSLIQMFSGG 907
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 120/262 (45%), Gaps = 1/262 (0%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
K ++V YN++++A +A+ D+ +LFK + P+ TYN ++ + ++ E
Sbjct: 856 KKDVVEYNVMVKAYGKAKLYDKAFSLFKGMRNHGTWPNESTYNSLIQMFSGGDLVDEARD 915
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+L+ M+ KP +TF+ +I Y + V++ ++ KP + S+I +
Sbjct: 916 ILAEMQKMGFKPQCLTFSAVIACYARLGRLPDAVGVYEEMVRLGVKPNEVVYGSLINGFS 975
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
+ +A F+KM + + I +I Y + A+ +++ + L +
Sbjct: 976 ETGNVEEALCYFRKMDEFGISANQIVLTSLIKAYSKVGCLEGAKTLYEGMKDLEGGPDIV 1035
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
N+M+ Y GL +EA L+F++ G + D ++ + Y M + + M
Sbjct: 1036 ASNSMINLYADLGLVSEAKLIFDDLRQKG-SADGVSFATMMYLYKNLGMLDEAIDVADEM 1094
Query: 457 EQNGIVPNKRFFLEALETFSSS 478
+Q+G + + F + + ++++
Sbjct: 1095 KQSGFLRDCASFNKVMACYATN 1116
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 155/386 (40%), Gaps = 40/386 (10%)
Query: 86 LMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADT 145
++R+ + + TL+ K+ E +L E+ W + L VF W++ Q Y+ +
Sbjct: 434 ILRALESEXNIEDTLSSCGKLSPKEQTVILKEQ----SSWERVLRVFEWIKSQEDYVPNV 489
Query: 146 GIYSKLIAVMG---KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
Y+ ++ V+G K + RL W+ EM +G P + Y L+ + KA + +
Sbjct: 490 IHYNVVLRVLGRAQKWDELRLC-WI--EMAKNGVLPTNNTYGMLVDVY----GKAGLVKE 542
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
AL + + MK + P+ VT N ++R A D + +++ + + V
Sbjct: 543 ALLWIKHMK-LRGVFPDEVTMNTVVRVLKDAGEFDWADRFYRDWCVGKVELGDFDLESVA 601
Query: 263 DA----------------------YGKNGMIKEMESVLSRMKSNQCKPDII-TFNLLIDS 299
D+ G+ + M+S S ++ KP + T+N LID
Sbjct: 602 DSDDEIGSAPVSLKHFLSTELFKIGGRRPISNIMDS--SNTDGSRHKPRLTATYNTLIDL 659
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
YGK VF ++ TFN+MI G +AE + +M +P
Sbjct: 660 YGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIYTCGSHGHLSEAETLLTEMEERGISPD 719
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
TY +++Y N+ A + + ++ ++G V T A+L C + E + +
Sbjct: 720 TKTYNIFLSLYADGGNIDAALKCYRKIREVGLFPDVVTHRAVLHVLCERNMVGEVETVIA 779
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANM 445
V D + ++ K Y +
Sbjct: 780 EMKRSRVRVDEHSIPVVIKMYVNEGL 805
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 134/332 (40%), Gaps = 8/332 (2%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y LI + G A+ F +M G + V +LI A+ K L A
Sbjct: 966 VYGSLINGFSETGNVEEALCYFRKMDEFGISANQIVLTSLIKAY----SKVGCLEGAKTL 1021
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
++ MK +E P+IV N ++ A V + +F +L + A D ++ +M Y
Sbjct: 1022 YEGMKDLE-GGPDIVASNSMINLYADLGLVSEAKLIFDDLRQKGSA-DGVSFATMMYLYK 1079
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
GM+ E V MK + D +FN ++ Y ++ ++ + P
Sbjct: 1080 NLGMLDEAIDVADEMKQSGFLRDCASFNKVMACYATNGQLSACGELLHEMISRRILPDTG 1139
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
TF M K L E V Q ++ + + I +++ + A E +
Sbjct: 1140 TFKVMFTVLKKGGL--PTEAVTQLESSYQEGKPYARQAVITSVFSTVGLHAFALESCETF 1197
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
D+ S N + AY +G +A +F + G+ PD TY L Y KA M
Sbjct: 1198 LNAEVDLDSSFYNVAIYAYGASGSIDKALKMFMKMQDEGLEPDLVTYINLAGCYGKAGML 1257
Query: 447 ELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
E ++++ +++ I PN+ F ++ + S+
Sbjct: 1258 EGLKRIYSQLKYREIEPNESLFKAIIDAYRSA 1289
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 102/240 (42%), Gaps = 32/240 (13%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L++ LG D + ++V M KQ ++ D ++K++A GQ L EM +
Sbjct: 1077 LYKNLGMLD---EAIDVADEM-KQSGFLRDCASFNKVMACYATNGQLSACGELLHEMISR 1132
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK--------------------GME 214
PD + + T +A+ + +Q+ K +E
Sbjct: 1133 RILPDTGTFKVMFTVLKKGGLPTEAVTQLESSYQEGKPYARQAVITSVFSTVGLHAFALE 1192
Query: 215 RCKPNIVT--------YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
C+ + YN+ + A + ++D+ +F ++ + L PD+ TY + YG
Sbjct: 1193 SCETFLNAEVDLDSSFYNVAIYAYGASGSIDKALKMFMKMQDEGLEPDLVTYINLAGCYG 1252
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K GM++ ++ + S++K + +P+ F +ID+Y + D E V + + + + LP
Sbjct: 1253 KAGMLEGLKRIYSQLKYREIEPNESLFKAIIDAYRSAKRHDLAELVSQEMKFAFDTTMLP 1312
>gi|222618027|gb|EEE54159.1| hypothetical protein OsJ_00969 [Oryza sativa Japonica Group]
Length = 610
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 162/341 (47%), Gaps = 19/341 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+A + + WL +E+ ++G RPD +NALI A + +A+ + +A F
Sbjct: 117 YTTLLAALTSQRAFDTIPWLLAEVEDAGLRPDSIFFNALINALV----EARRMGEATNTF 172
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI------LAPDIYTYNGV 261
+M G C+P T+N L++ A ++ +F + + P++ TYN +
Sbjct: 173 LRM-GHSGCRPTASTFNTLIKGYGIAGRPEESQRVFDMMASGGAGGEAAVRPNLTTYNIL 231
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR-QAFDKMEQVFKSLMHSK 320
+ A+ G ++E V++RM+++ PD++T+N L +Y K + + E V + +
Sbjct: 232 VKAWCDAGRLEEAWRVVARMRASGADPDVVTYNTLASAYAKNDETWRAEELVVEMAQQAG 291
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+ + T+ ++ Y + G+A ++M P+ I + ++ + ++++
Sbjct: 292 LRTSERTWGIIVGGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAVD 351
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
++ + + G + T + L A G + +F+ G+ PD Y +L K Y
Sbjct: 352 DVLGLMEQFGIKPDIVTYSHQLNALSSMGHMAKCMKVFDKMIEAGIEPDPQVYSILAKGY 411
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
+A E ++LL++M + G+ PN + TF++ ++G
Sbjct: 412 VRAQQPEKAEELLRQMGRLGVRPN-------VVTFTTVISG 445
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 117/268 (43%), Gaps = 7/268 (2%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+P++VTY LL A R D + L E+ ++ L PD +N +++A + + E +
Sbjct: 111 RPSLVTYTTLLAALTSQRAFDTIPWLLAEVEDAGLRPDSIFFNALINALVEARRMGEATN 170
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE------KPTLPTFNS 330
RM + C+P TFN LI YG ++ ++VF + +P L T+N
Sbjct: 171 TFLRMGHSGCRPTASTFNTLIKGYGIAGRPEESQRVFDMMASGGAGGEAAVRPNLTTYNI 230
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS-KL 389
++ + A +A V +M A P +TY + + Y D RA E+ E++ +
Sbjct: 231 LVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNTLASAYAKNDETWRAEELVVEMAQQA 290
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
G T ++ YC G EA + GV P+ + L K + AN V
Sbjct: 291 GLRTSERTWGIIVGGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAV 350
Query: 450 QKLLKRMEQNGIVPNKRFFLEALETFSS 477
+L MEQ GI P+ + L SS
Sbjct: 351 DDVLGLMEQFGIKPDIVTYSHQLNALSS 378
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 7/256 (2%)
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+RA AR Q ++ F+ L + P + TY ++ A + +L+ ++
Sbjct: 86 MRAMIDARRPHQAHSAFRHLVDDGHRPSLVTYTTLLAALTSQRAFDTIPWLLAEVEDAGL 145
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
+PD I FN LI++ + + + F + HS +PT TFN++I YG A +++
Sbjct: 146 RPDSIFFNALINALVEARRMGEATNTFLRMGHSGCRPTASTFNTLIKGYGIAGRPEESQR 205
Query: 347 VFQKMTAMKYT------PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
VF M + P+ TY ++ + + A + + G D V T N
Sbjct: 206 VFDMMASGGAGGEAAVRPNLTTYNILVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNT 265
Query: 401 MLEAYCMNGLPTEA-DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
+ AY N A +L+ E + G+ T+ ++ Y + + +++M+ +
Sbjct: 266 LASAYAKNDETWRAEELVVEMAQQAGLRTSERTWGIIVGGYCREGRLGEALRCVRQMKDS 325
Query: 460 GIVPNKRFFLEALETF 475
G++PN F L+ F
Sbjct: 326 GVLPNVIVFNTLLKGF 341
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 111/277 (40%), Gaps = 47/277 (16%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKA-------- 199
Y+ L+ G+ A + + MR SG PD YN L +A+ + +A
Sbjct: 228 YNILVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNTLASAYAKNDETWRAEELVVEMA 287
Query: 200 ------------------------LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
L +AL ++MK PN++ +N LL+ A +
Sbjct: 288 QQAGLRTSERTWGIIVGGYCREGRLGEALRCVRQMKD-SGVLPNVIVFNTLLKGFLDAND 346
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
+ V+ + + + + PDI TY+ ++A G + + V +M +PD +++
Sbjct: 347 MAAVDDVLGLMEQFGIKPDIVTYSHQLNALSSMGHMAKCMKVFDKMIEAGIEPDPQVYSI 406
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFN---------SMIINYGKARLQGKAEY 346
L Y + Q +K E++ + + +P + TF ++I Y + + KAE
Sbjct: 407 LAKGYVRAQQPEKAEELLRQMGRLGVRPNVVTFTTVISGWTFETLIWGYSELKQPWKAEE 466
Query: 347 VFQKMTAMKYTPSFITYECIIT----MYGYCDNVSRA 379
V Q M P TY C++ G +N +RA
Sbjct: 467 VLQMMQDAGVRPKQTTY-CLVADAWKAVGLVENANRA 502
>gi|125525011|gb|EAY73125.1| hypothetical protein OsI_00999 [Oryza sativa Indica Group]
Length = 634
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 160/337 (47%), Gaps = 12/337 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+A + + WL +E+ ++G RPD +NALI A + +A+ + +A F
Sbjct: 117 YTTLLAALTSQRAFDTIPWLLAEVEDAGLRPDSIFFNALINALV----EARRMGEATNTF 172
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL------HESILAPDIYTYNGV 261
+M G C+P T+N L++ A ++ +F + E+ + P++ TYN +
Sbjct: 173 LRM-GHSGCRPTASTFNTLIKGYGIAGRPEESQRVFDMMASGGAGGEAAVRPNLTTYNIL 231
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR-QAFDKMEQVFKSLMHSK 320
+ A+ G ++E V++RM+++ PD++T+N L +Y K + + E V + +
Sbjct: 232 VKAWCDAGRLEEAWRVVARMRASGADPDVVTYNTLASAYAKNDETWRAEELVVEMAQQAG 291
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+ + T+ ++ Y + G+A ++M P+ I + ++ + ++++
Sbjct: 292 LRTSERTWGIIVGGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAVD 351
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
++ + + G + T + L A G + +F+ G+ PD Y +L K Y
Sbjct: 352 DVLGLMEQFGIKPDIVTYSHQLNALSSMGHMAKCMKVFDKMIEAGIEPDPQVYSILAKGY 411
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
+A E ++LL++M + G+ PN F + + S
Sbjct: 412 VRAQQPEKAEELLRQMGRLGVRPNVVTFTTVISGWCS 448
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 117/268 (43%), Gaps = 7/268 (2%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+P++VTY LL A R D + L E+ ++ L PD +N +++A + + E +
Sbjct: 111 RPSLVTYTTLLAALTSQRAFDTIPWLLAEVEDAGLRPDSIFFNALINALVEARRMGEATN 170
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE------KPTLPTFNS 330
RM + C+P TFN LI YG ++ ++VF + +P L T+N
Sbjct: 171 TFLRMGHSGCRPTASTFNTLIKGYGIAGRPEESQRVFDMMASGGAGGEAAVRPNLTTYNI 230
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS-KL 389
++ + A +A V +M A P +TY + + Y D RA E+ E++ +
Sbjct: 231 LVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNTLASAYAKNDETWRAEELVVEMAQQA 290
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
G T ++ YC G EA + GV P+ + L K + AN V
Sbjct: 291 GLRTSERTWGIIVGGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAV 350
Query: 450 QKLLKRMEQNGIVPNKRFFLEALETFSS 477
+L MEQ GI P+ + L SS
Sbjct: 351 DDVLGLMEQFGIKPDIVTYSHQLNALSS 378
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 7/256 (2%)
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+RA AR Q ++ F+ L + P + TY ++ A + +L+ ++
Sbjct: 86 MRAMIDARRPHQAHSAFRHLVDDGHRPSLVTYTTLLAALTSQRAFDTIPWLLAEVEDAGL 145
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
+PD I FN LI++ + + + F + HS +PT TFN++I YG A +++
Sbjct: 146 RPDSIFFNALINALVEARRMGEATNTFLRMGHSGCRPTASTFNTLIKGYGIAGRPEESQR 205
Query: 347 VFQKMTAMKYT------PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
VF M + P+ TY ++ + + A + + G D V T N
Sbjct: 206 VFDMMASGGAGGEAAVRPNLTTYNILVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNT 265
Query: 401 MLEAYCMNGLPTEA-DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
+ AY N A +L+ E + G+ T+ ++ Y + + +++M+ +
Sbjct: 266 LASAYAKNDETWRAEELVVEMAQQAGLRTSERTWGIIVGGYCREGRLGEALRCVRQMKDS 325
Query: 460 GIVPNKRFFLEALETF 475
G++PN F L+ F
Sbjct: 326 GVLPNVIVFNTLLKGF 341
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/302 (19%), Positives = 135/302 (44%), Gaps = 8/302 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRD--KAKALAKALG 205
Y+ L+ G+ A + + MR SG PD YN L +A+ + +A+ L +
Sbjct: 228 YNILVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNTLASAYAKNDETWRAEELVVEMA 287
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
++ ER T+ I++ + + + +++ +S + P++ +N ++ +
Sbjct: 288 QQAGLRTSER------TWGIIVGGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGF 341
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ ++ VL M+ KPDI+T++ +++ K +VF ++ + +P
Sbjct: 342 LDANDMAAVDDVLGLMEQFGIKPDIVTYSHQLNALSSMGHMAKCMKVFDKMIEAGIEPDP 401
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
++ + Y +A+ KAE + ++M + P+ +T+ +I+ + ++ A ++
Sbjct: 402 QVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPNVVTFTTVISGWCSVADMGNAVRVYAA 461
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ G + T ++ Y P +A+ + + + GV P +TY L+ A+ +
Sbjct: 462 MRDAGVRPNLRTFETLIWGYSELKQPWKAEEVLQMMQDAGVRPKQTTYCLVADAWKAVGL 521
Query: 446 KE 447
E
Sbjct: 522 VE 523
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 121/263 (46%), Gaps = 10/263 (3%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
K+D+ + E+ M +Q + ++ ++G+ A+ +M++SG P+
Sbjct: 272 KNDETWRAEELVVEMAQQAGLRTSERTWGIIVGGYCREGRLGEALRCVRQMKDSGVLPNV 331
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
V+N L+ L D A A+ LG ++ KP+IVTY+ L A + ++ +
Sbjct: 332 IVFNTLLKGFLDANDMA-AVDDVLGLMEQFG----IKPDIVTYSHQLNALSSMGHMAKCM 386
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
+F ++ E+ + PD Y+ + Y + ++ E +L +M +P+++TF +I +
Sbjct: 387 KVFDKMIEAGIEPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPNVVTFTTVISGW 446
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
+V+ ++ + +P L TF ++I Y + + KAE V Q M P
Sbjct: 447 CSVADMGNAVRVYAAMRDAGVRPNLRTFETLIWGYSELKQPWKAEEVLQMMQDAGVRPKQ 506
Query: 361 ITYECIIT----MYGYCDNVSRA 379
TY C++ G +N +RA
Sbjct: 507 TTY-CLVADAWKAVGLVENANRA 528
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 150/336 (44%), Gaps = 6/336 (1%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E++ M + DT YS LI+ K G+ A+ L +EM+++G +P +Y L+
Sbjct: 215 ELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVAL 274
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
D + AL F++M+ + C+P++ TY L+R +A +D+ F E+
Sbjct: 275 FFKLND----VHGALSLFEEMRH-QYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQRE 329
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS-YGKRQAFDK 308
PD N +++ GK G + + + M + +C P ++T+N +I + + + +
Sbjct: 330 GCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASE 389
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+ F+ + S P+ T++ +I + K KA + ++M + P Y +I
Sbjct: 390 VPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLID 449
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
G A E+F EL + M++ G +A +F+ + +G P
Sbjct: 450 ALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAP 509
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
D Y L + M + ++RM+++G +P+
Sbjct: 510 DVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPD 545
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 144/328 (43%), Gaps = 10/328 (3%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
F +LG+ D +Q L + Q T IY+ L+A+ K A+ LF EMR+
Sbjct: 240 FCKLGRRDSAIQLLNEMKDNGMQ----PTTKIYTMLVALFFKLNDVHGALSLFEEMRHQY 295
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
CRPD Y LI KA + +A +F +M+ E C+P+ + N ++ +A
Sbjct: 296 CRPDVFTYTELIRG----LGKAGRIDEAYHFFYEMQ-REGCRPDTIVMNNMINFLGKAGR 350
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDA-YGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+D LF+E+ P + TYN ++ A + E+ S RMK + P T++
Sbjct: 351 LDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYS 410
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+LID + K +K + + + P + S+I GKA+ A +FQ++
Sbjct: 411 ILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKEN 470
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ S Y +I G + A +FDE++KLG V NA++ G+ EA
Sbjct: 471 CGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEA 530
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTK 442
G PD ++Y ++ K
Sbjct: 531 LSTMRRMQEHGCIPDINSYNIILNGLQK 558
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 165/368 (44%), Gaps = 19/368 (5%)
Query: 104 VKVVRSEHCFLLFEELGKSDKWLQC-LEVFRWMQKQRWYIADTGIYSKLI---AVMGKKG 159
V ++R +H L E+ K+D + ++ FRW K+R Y DT Y LI V+ + G
Sbjct: 83 VLMLRVDH--WLVREIMKTDIGVNVKMQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYG 140
Query: 160 QTRLAMW-LFSEM-RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCK 217
+ MW + EM RN C P+ + ++ AK ++KA+ F ++K +C+
Sbjct: 141 E----MWKMIQEMVRNPICVVTPTELSEVV----RMLGNAKMVSKAIAIFYQIK-TRKCQ 191
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELH-ESILAPDIYTYNGVMDAYGKNGMIKEMES 276
P YN ++ ++V+ L+ E+ E PD TY+ ++ A+ K G
Sbjct: 192 PTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSAIQ 251
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+L+ MK N +P + +L+ + K +F+ + H +P + T+ +I G
Sbjct: 252 LLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRGLG 311
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
KA +A + F +M P I +I G + A ++F E+ L V
Sbjct: 312 KAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVV 371
Query: 397 TLNAMLEA-YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
T N +++A + +E FE G++P S TY +L + K N E LL+
Sbjct: 372 TYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEE 431
Query: 456 MEQNGIVP 463
M++ G P
Sbjct: 432 MDEKGFPP 439
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Query: 130 EVFRWMQKQRWYIADTGI------YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
EV W ++ + ++GI YS LI K + AM L EM G P P+ Y
Sbjct: 389 EVPSWFERMK----ESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAY 444
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV-TYNILLRACAQARNVDQVNAL 242
+LI A KAK A FQ++K E C + Y ++++ +A +D +
Sbjct: 445 CSLIDA----LGKAKRYDLACELFQELK--ENCGSSSSRVYAVMIKHLGKAGRLDDAINM 498
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
F E+++ APD+Y YN +M + GM+ E S + RM+ + C PDI ++N++++ K
Sbjct: 499 FDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLQK 558
Query: 303 RQ 304
++
Sbjct: 559 QE 560
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 73/188 (38%), Gaps = 35/188 (18%)
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN-YGKARLQGKAEYV 347
D T+ LI + + +M ++ + ++ + PT S ++ G A++ KA +
Sbjct: 122 DTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAI 181
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F ++ K P+ Y +I M + + E+++E+S E +C
Sbjct: 182 FYQIKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMST--------------EGHCF 227
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
PD+ TY L A+ K ++ +LL M+ NG+ P +
Sbjct: 228 --------------------PDTMTYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKI 267
Query: 468 FLEALETF 475
+ + F
Sbjct: 268 YTMLVALF 275
>gi|125572530|gb|EAZ14045.1| hypothetical protein OsJ_03970 [Oryza sativa Japonica Group]
Length = 665
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 154/341 (45%), Gaps = 16/341 (4%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
+ R D YS L+A + + G A+ M + PD +++ LI L D
Sbjct: 155 RDRGVAPDAFSYSTLLAALTRAGHLDHALTFLPLMEDDAVAPDLVLFSNLIHLALRGGDA 214
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDI 255
KALA F +++G KP++ YN + A C D L ++ +APD
Sbjct: 215 PKALA----LFSRLRGAAGIKPDLKAYNAAIAAYCKSDLLRDANRLLLHDMPSDGVAPDA 270
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKS-NQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
+Y+ ++ A + G S+ + M++ + KPD+ FN+++++YG+ + +++F
Sbjct: 271 ESYSPILAALARRGRHLAAVSLFTHMRAVARVKPDLSVFNIVLNAYGQLDLAREADRLFW 330
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK----------YTPSFITYE 364
S+ + P++ T+N+M+ YG A L G+A ++F M + P+ +TY
Sbjct: 331 SMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRSAASDGSDRGGSVIKPNVVTYN 390
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
+I +YG +A + ++ G T + +L + G A LFE
Sbjct: 391 TMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTILSIWVKAGKLDRAGKLFEKLREA 450
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
G D Y+ + AY +A + ++LL ++ + VP +
Sbjct: 451 GTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLKDSEDVPKE 491
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 165/369 (44%), Gaps = 57/369 (15%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS-GCRPDPSVYNALITAHLHT---RDKAKA 199
D ++S LI + + G A+ LFS +R + G +PD YNA I A+ + RD +
Sbjct: 197 DLVLFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKSDLLRDANRL 256
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQ-ARNVDQVNALFKELHE-SILAPDIYT 257
L M + P+ +Y+ +L A A+ R++ V+ LF + + + PD+
Sbjct: 257 L------LHDMPS-DGVAPDAESYSPILAALARRGRHLAAVS-LFTHMRAVARVKPDLSV 308
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
+N V++AYG+ + +E + + M+ P ++T+N ++ YG F + +F LM
Sbjct: 309 FNIVLNAYGQLDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLF-GLM 367
Query: 318 HSKE-----------KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
S KP + T+N+MI YGK+ KA + Q M A P+ ITY I
Sbjct: 368 RSAASDGSDRGGSVIKPNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPNAITYSTI 427
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT-------------- 412
++++ + RA ++F++L + G ++ M+ AY GL +
Sbjct: 428 LSIWVKAGKLDRAGKLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLKDSED 487
Query: 413 -----------------EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
EA LF + + G D+S Y+++ + K+ V ++
Sbjct: 488 VPKETAIKILANAGRVEEAAWLFRRAADAGDVRDTSVYRMMIDLFAKSRRHRSVIEVFDE 547
Query: 456 MEQNGIVPN 464
M + G +P+
Sbjct: 548 MRKAGSLPD 556
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 118/293 (40%), Gaps = 48/293 (16%)
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
++ YN+LLR+ + + + L E+ + +APD ++Y+ ++ A + G + + L
Sbjct: 128 LIPYNLLLRSACRPGMLRLASGLLLEMRDRGVAPDAFSYSTLLAALTRAGHLDHALTFLP 187
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-KPTLPTFNSMIINYGKA 338
M+ + PD++ F+ LI + K +F L + KP L +N+ I Y K+
Sbjct: 188 LMEDDAVAPDLVLFSNLIHLALRGGDAPKALALFSRLRGAAGIKPDLKAYNAAIAAYCKS 247
Query: 339 RL---------------------------------QGK---AEYVFQKMTAM-KYTPSFI 361
L +G+ A +F M A+ + P
Sbjct: 248 DLLRDANRLLLHDMPSDGVAPDAESYSPILAALARRGRHLAAVSLFTHMRAVARVKPDLS 307
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF--- 418
+ ++ YG D A +F + + G V T N ML Y GL EA LF
Sbjct: 308 VFNIVLNAYGQLDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLM 367
Query: 419 -----ENSHNMG--VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ S G + P+ TY + Y K+ E L++ M+ NGI PN
Sbjct: 368 RSAASDGSDRGGSVIKPNVVTYNTMIAIYGKSLEDEKAGSLVQDMQANGIQPN 420
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 80/169 (47%), Gaps = 9/169 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS ++++ K G+ A LF ++R +G DP +Y ++ A+ ++A ++++
Sbjct: 424 YSTILSIWVKAGKLDRAGKLFEKLREAGTEIDPVLYQTMVVAY----ERAGLVSQSKRLL 479
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+K E P IL A A V++ LF+ ++ D Y ++D + K
Sbjct: 480 HDLKDSEDV-PKETAIKIL----ANAGRVEEAAWLFRRAADAGDVRDTSVYRMMIDLFAK 534
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+ + + V M+ PD T + ++++GK + FDK +++++
Sbjct: 535 SRRHRSVIEVFDEMRKAGSLPDSETIAITMNAHGKLKEFDKAAALYRAM 583
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 108/270 (40%), Gaps = 52/270 (19%)
Query: 129 LEVFRWMQKQRWYIADTGI------YSKLIAVMGKKGQTRLAMWLFSEMRNSG------- 175
L++ R + W + G+ Y+ ++ V G G A+ LF MR++
Sbjct: 319 LDLAREADRLFWSMRRAGVAPSVVTYNTMLRVYGDAGLFGEAVHLFGLMRSAASDGSDRG 378
Query: 176 ---CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
+P+ YN +I + + + KA + Q M+ +PN +TY+ +L +
Sbjct: 379 GSVIKPNVVTYNTMIAIYGKSLEDEKAGS----LVQDMQA-NGIQPNAITYSTILSIWVK 433
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP---- 288
A +D+ LF++L E+ D Y ++ AY + G++ + + +L +K ++ P
Sbjct: 434 AGKLDRAGKLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQSKRLLHDLKDSEDVPKETA 493
Query: 289 ---------------------------DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
D + ++ID + K + + +VF + +
Sbjct: 494 IKILANAGRVEEAAWLFRRAADAGDVRDTSVYRMMIDLFAKSRRHRSVIEVFDEMRKAGS 553
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
P T + +GK + KA +++ M
Sbjct: 554 LPDSETIAITMNAHGKLKEFDKAAALYRAM 583
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 150/316 (47%), Gaps = 13/316 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ +I + K G+ A + +M+ GC P+ YN LI + K + KA
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGK-MYKADAVL 284
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M + PN+ T+NIL+ + N+ +FKE+ + + P++ +YN +++
Sbjct: 285 KEMVEND-VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCN 343
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G I E S+ +M S +P++IT+N LI+ + K + +F S+ PT
Sbjct: 344 GGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRM 403
Query: 328 FNSMIINYGKARLQGKAEYVF---QKMTAMKYTPSFITYECIITMYGYC--DNVSRAREI 382
+N +I Y K GK + F ++M P TY C+I G C N+ A+++
Sbjct: 404 YNMLIDAYCKL---GKIDDGFALKEEMEREGIVPDVGTYNCLIA--GLCRNGNIEAAKKL 458
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
FD+L+ G + T + ++E YC G +A +L + MG+ P TY ++ K Y K
Sbjct: 459 FDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCK 517
Query: 443 ANMKELVQKLLKRMEQ 458
+ + +ME+
Sbjct: 518 EGNLKAATNMRTQMEK 533
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 128/265 (48%), Gaps = 14/265 (5%)
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
GY+ CKP +++ + R+ D V ++KE+ + P+++T+N V++A
Sbjct: 180 GYYGYKLSALSCKP------LMIALLKENRSAD-VEYVYKEMIRRKIQPNVFTFNVVINA 232
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM---EQVFKSLMHSKE 321
K G + + V+ MK C P+++++N LID Y K KM + V K ++ +
Sbjct: 233 LCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDV 292
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRA 379
P L TFN +I + K + VF++M P+ I+Y +I G C+ +S A
Sbjct: 293 SPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLIN--GLCNGGKISEA 350
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+ D++ G + T NA++ +C N + EA +F + G P + Y +L A
Sbjct: 351 ISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDA 410
Query: 440 YTKANMKELVQKLLKRMEQNGIVPN 464
Y K + L + ME+ GIVP+
Sbjct: 411 YCKLGKIDDGFALKEEMEREGIVPD 435
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 120/252 (47%), Gaps = 7/252 (2%)
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY---GKNGMI 271
+ +PN+ T+N+++ A + +++ + +++ +P++ +YN ++D Y G NG +
Sbjct: 218 KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKM 277
Query: 272 KEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM 331
+ ++VL M N P++ TFN+LID + K +VFK ++ KP + ++NS+
Sbjct: 278 YKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSL 337
Query: 332 IINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKL 389
I +A + KM + P+ ITY +I G+C N + A ++F +
Sbjct: 338 INGLCNGGKISEAISMRDKMVSAGVQPNLITYNALIN--GFCKNDMLKEALDMFGSVKGQ 395
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
G N +++AYC G + L E G+ PD TY L + E
Sbjct: 396 GAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455
Query: 450 QKLLKRMEQNGI 461
+KL ++ G+
Sbjct: 456 KKLFDQLTSKGL 467
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 8/215 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L K+D + L++F ++ Q + T +Y+ LI K G+ L EM
Sbjct: 372 LINGFCKNDMLKEALDMFGSVKGQ-GAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMERE 430
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G PD YN LI R+ AK L KG+ P++VT++IL+ +
Sbjct: 431 GIVPDVGTYNCLIAGL--CRNGNIEAAKKLFDQLTSKGL----PDLVTFHILMEGYCRKG 484
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITF 293
+ L KE+ + L P TYN VM Y K G +K ++ ++M K + + ++ ++
Sbjct: 485 ESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASY 544
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
N+L+ Y ++ + + ++ P T+
Sbjct: 545 NVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 157 KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERC 216
+KG++R A L EM G +P YN ++ + K L A +M+ R
Sbjct: 482 RKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC----KEGNLKAATNMRTQMEKERRL 537
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+ N+ +YN+LL+ +Q ++ N L E+ E L P+ TY V + G + ++E
Sbjct: 538 RMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEG 597
Query: 277 VL 278
L
Sbjct: 598 HL 599
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 11/180 (6%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
+LGK D + ++ + D G Y+ LIA + + G A LF ++ + G
Sbjct: 413 KLGKIDDGF----ALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL- 467
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
PD ++ L+ + + KA A L KM G+ KP +TYNI+++ + N+
Sbjct: 468 PDLVTFHILMEGYCRKGESRKA-AMLLKEMSKM-GL---KPRHLTYNIVMKGYCKEGNLK 522
Query: 238 QVNALFKELH-ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
+ ++ E L ++ +YN ++ Y + G +++ +L+ M P+ IT+ ++
Sbjct: 523 AATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 155/327 (47%), Gaps = 23/327 (7%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI G+ + + F EM +GC P+ YN LI A+ K + +A G
Sbjct: 13 YNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYC----KMGRIDEAFGLL 68
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+ M KGM+ PN+++YN+++ + ++ + + +E+ PD TYN +++ Y
Sbjct: 69 KSMSSKGMQ---PNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G + + + M N P ++T+ LI+S K + ++ + F + +P
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIF 383
T+ ++I + + L +A + +MT ++PS +TY I +G+C + + A +
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFI--HGHCVLERMEEALGVV 243
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM---GVTPDSSTYKLLYKAY 440
E+ + G V + + ++ +C G E D F+ M GV+PD+ TY L +
Sbjct: 244 QEMVEKGLAPDVVSYSTIISGFCRKG---ELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 300
Query: 441 TKANMKELVQ--KLLKRMEQNGIVPNK 465
+ M+ L + L + M G+ P++
Sbjct: 301 CE--MRRLTEACDLSQEMLDMGLPPDE 325
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 133/287 (46%), Gaps = 5/287 (1%)
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
P+ YN LI + L K LG F +M+ C PN+VTYN L+ A + +D
Sbjct: 8 PNVYTYNILIRGFCSVGE----LQKGLGCFGEME-RNGCLPNVVTYNTLIDAYCKMGRID 62
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ L K + + P++ +YN +++ + G +KE +L M PD +T+N L+
Sbjct: 63 EAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLL 122
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+ Y K F + + ++ + P++ T+ ++I + KAR +A F +M
Sbjct: 123 NGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLR 182
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P+ TY +I + ++ A I +E+++ G V T NA + +C+ EA +
Sbjct: 183 PNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGV 242
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ G+ PD +Y + + + + ++ + M + G+ P+
Sbjct: 243 VQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPD 289
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 115/250 (46%)
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
R PN+ TYNIL+R + + F E+ + P++ TYN ++DAY K G I E
Sbjct: 5 RVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEA 64
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
+L M S +P++I++N++I+ + + + ++ + + + P T+N+++
Sbjct: 65 FGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNG 124
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
Y K +A + +M +PS +TY +I N++RA E FD++ G
Sbjct: 125 YCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPN 184
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
T +++ + GL EA + G +P TY + E +++
Sbjct: 185 ERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQ 244
Query: 455 RMEQNGIVPN 464
M + G+ P+
Sbjct: 245 EMVEKGLAPD 254
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 151/332 (45%), Gaps = 9/332 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I + ++G + A + EM G PD YN L+ + K +AL
Sbjct: 83 YNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYC----KEGNFHQALVIH 138
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M P++VTY L+ + +ARN+++ F ++ L P+ TY ++D + +
Sbjct: 139 AEMV-RNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSR 197
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G++ E +L+ M + P ++T+N I + + ++ V + ++ P + +
Sbjct: 198 QGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVS 257
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRAREIFDE 385
++++I + + +A + Q+M +P +TY +I G C+ ++ A ++ E
Sbjct: 258 YSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQ--GLCEMRRLTEACDLSQE 315
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ +G T ++ AYC+ G +A L + + G PD+ TY +L K
Sbjct: 316 MLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQAR 375
Query: 446 KELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
++LL ++ VP+ + +E S+
Sbjct: 376 TREAKRLLFKLIYEESVPSDVTYDTLIENCSN 407
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 155/376 (41%), Gaps = 55/376 (14%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
+ + D Y+ L+ K+G A+ + +EM +G P Y ALI + KA+
Sbjct: 109 KGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMC----KAR 164
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
L +A+ +F +M+ + +PN TY L+ ++ +++ + E+ ES +P + TY
Sbjct: 165 NLNRAMEFFDQMR-IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTY 223
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N + + ++E V+ M PD+++++ +I + ++ D+ Q+ + ++
Sbjct: 224 NAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVE 283
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
P T++S+I + R +A + Q+M M P TY +I Y ++++
Sbjct: 284 KGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNK 343
Query: 379 AREIFDELSKLG------------------------------------------------ 390
A + DE+ G
Sbjct: 344 ALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIE 403
Query: 391 --KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
+++ ++ A+++ +CM GL EAD +FE+ P + Y ++ + +
Sbjct: 404 NCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPK 463
Query: 449 VQKLLKRMEQNGIVPN 464
L K M +G VP+
Sbjct: 464 AFNLYKEMIHSGFVPH 479
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 4/198 (2%)
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
M ++ P++ T+N+LI + K F + + P + T+N++I Y K
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTL 398
+A + + M++ P+ I+Y II G C ++ A EI +E+ G T
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIIN--GLCREGSMKEAWEILEEMGYKGFTPDEVTY 118
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N +L YC G +A ++ GV+P TY L + KA + +M
Sbjct: 119 NTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRI 178
Query: 459 NGIVPNKRFFLEALETFS 476
G+ PN+R + ++ FS
Sbjct: 179 RGLRPNERTYTTLIDGFS 196
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 133/321 (41%), Gaps = 42/321 (13%)
Query: 95 PLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAV 154
P V T N ++ HC L ++ + L V + M ++ D YS +I+
Sbjct: 218 PSVVTYNAFIH----GHCVL--------ERMEEALGVVQEMV-EKGLAPDVVSYSTIISG 264
Query: 155 MGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME 214
+KG+ A + EM G PD Y++LI R L +A Q+M M
Sbjct: 265 FCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMR----RLTEACDLSQEMLDM- 319
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
P+ TY L+ A ++++ L E+ PD TY+ +++ K +E
Sbjct: 320 GLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREA 379
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
+ +L ++ + P +T++ LI++ + FKS++ ++I
Sbjct: 380 KRLLFKLIYEESVPSDVTYDTLIENCSNIE--------FKSVV------------ALIKG 419
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKD 392
+ L +A+ VF+ M + P Y II +G+C N+ +A ++ E+ G
Sbjct: 420 FCMKGLMHEADRVFESMVERNHKPGEAVYNVII--HGHCRGGNLPKAFNLYKEMIHSGFV 477
Query: 393 MKVSTLNAMLEAYCMNGLPTE 413
T+ +++A G+ E
Sbjct: 478 PHTVTVITLIKALFKEGMNEE 498
>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
Length = 665
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 161/367 (43%), Gaps = 41/367 (11%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I G G + A+ L +M +G PD +N +++A ++ A+ +KA+ YF
Sbjct: 84 YNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSA---LKNGAQ-YSKAISYF 139
Query: 208 QKMKGME------------------------------------RCKPNIVTYNILLRACA 231
+ MKG +C P++VTY ++ +
Sbjct: 140 EIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYC 199
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
V+ A+F + + P+I YN ++ AY GM +E ++ + +K N +PDI+
Sbjct: 200 IYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIV 259
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
++ L+++YG+ +K +VF + + KP ++N++I YG A + +A + +M
Sbjct: 260 SYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEM 319
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P ++ ++ G C ++R I + G D+ N+ +++Y G
Sbjct: 320 EKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDY 379
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFL-E 470
+A L+ + V PD+ TY +L +K + + M + + K L E
Sbjct: 380 EKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEGKLSE 439
Query: 471 ALETFSS 477
A TFSS
Sbjct: 440 AESTFSS 446
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 144/334 (43%), Gaps = 11/334 (3%)
Query: 135 MQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR 194
M+ Q Y A IY +I + + Q A LF EM+ C+PD +YN+LI H H+R
Sbjct: 1 MKNQDNYCARNDIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLI--HAHSR 58
Query: 195 DKAKALAKALGYFQKMKGMERCK--PNIVTYNILLRACAQARNVDQVNALFKELHESILA 252
A M+ M R P TYN ++ AC A N + L K++ E+ +
Sbjct: 59 AGQWRWA-----INIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVG 113
Query: 253 PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
PD+ T+N V+ A + S MK D T N++I K + ++
Sbjct: 114 PDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIEL 173
Query: 313 FKSLMHSKEK--PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
F S+ + K P + T+ S++ +Y + +F M A P+ + Y ++ Y
Sbjct: 174 FNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAY 233
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
A IF+ + K G + + ++L AY + P +A +F P+
Sbjct: 234 ASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNK 293
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+Y L AY A M + LL ME++GI P+
Sbjct: 294 VSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPD 327
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 158/364 (43%), Gaps = 40/364 (10%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN--SGCRPDPSVYNALITAHLHTRDKAKAL 200
+DT + +I + K GQ A+ LF+ MR + C PD Y T+ +H+ +
Sbjct: 149 SDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTY----TSIMHSYCIYGQV 204
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
F M E KPNIV YN LL A A + A+F + ++ L PDI +Y
Sbjct: 205 ENCKAIFDLMVA-EGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTS 263
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
+++AYG++ ++ V ++MK N CKP+ +++N LID+YG + + +
Sbjct: 264 LLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDG 323
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P + + ++++ G+ R + E + + + + + Y I Y + +A
Sbjct: 324 IQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKAL 383
Query: 381 EIFDEL-------------------SKLGK---------DMKVSTLNAMLEAYCMNGLPT 412
E++ + SKLGK DM S +++ E G +
Sbjct: 384 ELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKE-----GKLS 438
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
EA+ F + G PD TY L +AY + L K ME NGI P+ +
Sbjct: 439 EAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLM 498
Query: 473 ETFS 476
E F+
Sbjct: 499 EAFN 502
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 153/333 (45%), Gaps = 29/333 (8%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ +G R A+ +F+ ++ +G RPD Y +L+ A+ ++ KA F
Sbjct: 226 YNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAY----GRSAQPEKAREVF 281
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
KMK CKPN V+YN L+ A A + + L E+ + + PD+ + + ++ A G+
Sbjct: 282 NKMK-KNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGR 340
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
I +E++L +S + + +N I SY ++K +++ S+ S KP T
Sbjct: 341 CRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVT 400
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII------TMYGYCDNVSRARE 381
+N +I G ++L KYT S +E ++ T G +S A
Sbjct: 401 YNILI--SGSSKLG-------------KYTESLRFFEDMVDSKVSSTKEG---KLSEAES 442
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
F + K G V T +++AY G A LF+ G+ PD+ L +A+
Sbjct: 443 TFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFN 502
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
K E V +L++ M++ I N++ + E + +
Sbjct: 503 KGGEPERVLQLMEFMKKKSIPLNQKSYFEIIAS 535
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 126/279 (45%), Gaps = 3/279 (1%)
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+A G F +M+ RCKP+ YN L+ A ++A + +++ + + P TYN V
Sbjct: 29 QARGLFFEMQEW-RCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNV 87
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
++A G G K+ + +M N PD++T N+++ + + K F+ + +
Sbjct: 88 INACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANV 147
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTA--MKYTPSFITYECIITMYGYCDNVSRA 379
T N +I K G+A +F M K P +TY I+ Y V
Sbjct: 148 TSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENC 207
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+ IFD + G + N++L AY G+ EA +F G+ PD +Y L A
Sbjct: 208 KAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNA 267
Query: 440 YTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
Y ++ E +++ +M++N PNK + ++ + S+
Sbjct: 268 YGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSA 306
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 26/231 (11%)
Query: 159 GQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH-------------------TRDKAKA 199
G A+ L++ MR S +PD YN LI+ + K
Sbjct: 377 GDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEGK 436
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L++A F MK C P+++TY L++A + LFKE+ + + PD +
Sbjct: 437 LSEAESTFSSMK-KSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICS 495
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
+M+A+ K G + + ++ MK + ++ +I S + + ++ + L S
Sbjct: 496 SLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYLDSS 555
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEY---VFQKMTAMKYTPSFITYECII 367
++ T N ++ GK GK E +F KM T TY ++
Sbjct: 556 LSSISVGTLNHVLNFLGKC---GKTENMMKLFYKMVTSCSTVGLSTYAVVL 603
>gi|115435438|ref|NP_001042477.1| Os01g0228400 [Oryza sativa Japonica Group]
gi|17385740|dbj|BAB78680.1| putative leaf protein [Oryza sativa Japonica Group]
gi|113532008|dbj|BAF04391.1| Os01g0228400 [Oryza sativa Japonica Group]
gi|215740499|dbj|BAG97155.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 636
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 160/337 (47%), Gaps = 12/337 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+A + + WL +E+ ++G RPD +NALI A + +A+ + +A F
Sbjct: 117 YTTLLAALTSQRAFDTIPWLLAEVEDAGLRPDSIFFNALINALV----EARRMGEATNTF 172
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL------HESILAPDIYTYNGV 261
+M G C+P T+N L++ A ++ +F + E+ + P++ TYN +
Sbjct: 173 LRM-GHSGCRPTASTFNTLIKGYGIAGRPEESQRVFDMMASGGAGGEAAVRPNLTTYNIL 231
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR-QAFDKMEQVFKSLMHSK 320
+ A+ G ++E V++RM+++ PD++T+N L +Y K + + E V + +
Sbjct: 232 VKAWCDAGRLEEAWRVVARMRASGADPDVVTYNTLASAYAKNDETWRAEELVVEMAQQAG 291
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+ + T+ ++ Y + G+A ++M P+ I + ++ + ++++
Sbjct: 292 LRTSERTWGIIVGGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAVD 351
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
++ + + G + T + L A G + +F+ G+ PD Y +L K Y
Sbjct: 352 DVLGLMEQFGIKPDIVTYSHQLNALSSMGHMAKCMKVFDKMIEAGIEPDPQVYSILAKGY 411
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
+A E ++LL++M + G+ PN F + + S
Sbjct: 412 VRAQQPEKAEELLRQMGRLGVRPNVVTFTTVISGWCS 448
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 117/268 (43%), Gaps = 7/268 (2%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+P++VTY LL A R D + L E+ ++ L PD +N +++A + + E +
Sbjct: 111 RPSLVTYTTLLAALTSQRAFDTIPWLLAEVEDAGLRPDSIFFNALINALVEARRMGEATN 170
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE------KPTLPTFNS 330
RM + C+P TFN LI YG ++ ++VF + +P L T+N
Sbjct: 171 TFLRMGHSGCRPTASTFNTLIKGYGIAGRPEESQRVFDMMASGGAGGEAAVRPNLTTYNI 230
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS-KL 389
++ + A +A V +M A P +TY + + Y D RA E+ E++ +
Sbjct: 231 LVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNTLASAYAKNDETWRAEELVVEMAQQA 290
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
G T ++ YC G EA + GV P+ + L K + AN V
Sbjct: 291 GLRTSERTWGIIVGGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAV 350
Query: 450 QKLLKRMEQNGIVPNKRFFLEALETFSS 477
+L MEQ GI P+ + L SS
Sbjct: 351 DDVLGLMEQFGIKPDIVTYSHQLNALSS 378
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 111/256 (43%), Gaps = 7/256 (2%)
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+RA AR Q ++ F+ L + P + TY ++ A + +L+ ++
Sbjct: 86 MRAMIDARRPHQAHSAFRHLVDDGHRPSLVTYTTLLAALTSQRAFDTIPWLLAEVEDAGL 145
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
+PD I FN LI++ + + + F + HS +PT TFN++I YG A +++
Sbjct: 146 RPDSIFFNALINALVEARRMGEATNTFLRMGHSGCRPTASTFNTLIKGYGIAGRPEESQR 205
Query: 347 VFQKMTAMKYT------PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
VF M + P+ TY ++ + + A + + G D V T N
Sbjct: 206 VFDMMASGGAGGEAAVRPNLTTYNILVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNT 265
Query: 401 MLEAYCMNGLPTEA-DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
+ AY N A +L+ E + G+ T+ ++ Y + + +++M+ +
Sbjct: 266 LASAYAKNDETWRAEELVVEMAQQAGLRTSERTWGIIVGGYCREGRLGEALRCVRQMKDS 325
Query: 460 GIVPNKRFFLEALETF 475
G++PN F L+ F
Sbjct: 326 GVLPNVIVFNTLLKGF 341
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/302 (19%), Positives = 135/302 (44%), Gaps = 8/302 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRD--KAKALAKALG 205
Y+ L+ G+ A + + MR SG PD YN L +A+ + +A+ L +
Sbjct: 228 YNILVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNTLASAYAKNDETWRAEELVVEMA 287
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
++ ER T+ I++ + + + +++ +S + P++ +N ++ +
Sbjct: 288 QQAGLRTSER------TWGIIVGGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGF 341
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ ++ VL M+ KPDI+T++ +++ K +VF ++ + +P
Sbjct: 342 LDANDMAAVDDVLGLMEQFGIKPDIVTYSHQLNALSSMGHMAKCMKVFDKMIEAGIEPDP 401
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
++ + Y +A+ KAE + ++M + P+ +T+ +I+ + ++ A ++
Sbjct: 402 QVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPNVVTFTTVISGWCSVADMGNAVRVYAA 461
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ G + T ++ Y P +A+ + + + GV P +TY L+ A+ +
Sbjct: 462 MRDAGVRPNLRTFETLIWGYSELKQPWKAEEVLQMMQDAGVRPKQTTYCLVADAWKAVGL 521
Query: 446 KE 447
E
Sbjct: 522 VE 523
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 121/263 (46%), Gaps = 10/263 (3%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
K+D+ + E+ M +Q + ++ ++G+ A+ +M++SG P+
Sbjct: 272 KNDETWRAEELVVEMAQQAGLRTSERTWGIIVGGYCREGRLGEALRCVRQMKDSGVLPNV 331
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
V+N L+ L D A A+ LG ++ KP+IVTY+ L A + ++ +
Sbjct: 332 IVFNTLLKGFLDANDMA-AVDDVLGLMEQFG----IKPDIVTYSHQLNALSSMGHMAKCM 386
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
+F ++ E+ + PD Y+ + Y + ++ E +L +M +P+++TF +I +
Sbjct: 387 KVFDKMIEAGIEPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPNVVTFTTVISGW 446
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
+V+ ++ + +P L TF ++I Y + + KAE V Q M P
Sbjct: 447 CSVADMGNAVRVYAAMRDAGVRPNLRTFETLIWGYSELKQPWKAEEVLQMMQDAGVRPKQ 506
Query: 361 ITYECIIT----MYGYCDNVSRA 379
TY C++ G +N +RA
Sbjct: 507 TTY-CLVADAWKAVGLVENANRA 528
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 147/322 (45%), Gaps = 5/322 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ +I+ K Q A +F MR+ G PD YN +I L +R K + +
Sbjct: 130 DVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMI-GSLCSRGKLELAFEV 188
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ K + CKP+++TY IL+ A +++ LF EL L PD+YTYN ++
Sbjct: 189 MDELLK----DGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIR 244
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K GM + + + C PD++++N+L+ S+ + ++ E++ K ++ S +P
Sbjct: 245 GICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEP 304
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T + +I ++ + +A V + M TP +Y+ +I+ + + A E
Sbjct: 305 NVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYL 364
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+++ G + N +L C G A +FE +G P Y ++ A
Sbjct: 365 EKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSC 424
Query: 444 NMKELVQKLLKRMEQNGIVPNK 465
K +++ M + GI P++
Sbjct: 425 GNKIKALEMISEMIRKGIDPDE 446
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 150/329 (45%), Gaps = 5/329 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI +G+ A+ LF E+ + G RPD YNA+I + +AL F
Sbjct: 204 YTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALD-----F 258
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ C P++V+YNILLR+ + L K++ S P++ T++ ++ ++ +
Sbjct: 259 VRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCR 318
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G ++E +VL MK PD +++ LI ++ K D + + ++ P +
Sbjct: 319 EGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVN 378
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N+++ K A VF+K+ + P+ Y + + C N +A E+ E+
Sbjct: 379 YNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMI 438
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ G D T N+++ C +GL EA L + P ++ ++ KA+
Sbjct: 439 RKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVF 498
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+LL M + G +PN+ ++ +E +
Sbjct: 499 EGIELLITMVEKGCLPNETSYVLLIEGIA 527
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 158/323 (48%), Gaps = 22/323 (6%)
Query: 150 KLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQK 209
KL+ + G+ +++ + + G +PD + LI ++R+ KA+ +
Sbjct: 67 KLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAM-------RV 119
Query: 210 MKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
M+ +E P++ +YN ++ ++A +D N +F + +PD+ TYN ++ +
Sbjct: 120 MEILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSR 179
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
G ++ V+ + + CKP +IT+ +LI++ ++ ++F L+ +P L T+
Sbjct: 180 GKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTY 239
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
N++I K ++ +A + ++A P ++Y ++ + ++++R +++ +
Sbjct: 240 NAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSF-----LNKSR--WEDGER 292
Query: 389 LGKDM-------KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
L KDM V T + ++ ++C G EA + E G+TPDS +Y L A+
Sbjct: 293 LMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFC 352
Query: 442 KANMKELVQKLLKRMEQNGIVPN 464
K +L + L++M +G +P+
Sbjct: 353 KEGRLDLAIEYLEKMVSDGCLPD 375
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 14/215 (6%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
G+ + + LEV K++ D+ Y LI+ K+G+ LA+ +M + GC PD
Sbjct: 320 GRVREAVNVLEVM----KEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPD 375
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQV 239
YN + L T K AL F+K+ + C P + YN + A N +
Sbjct: 376 IVNYNTI----LATLCKFGCADLALDVFEKLDEV-GCPPTVRAYNTMFSALWSCGNKIKA 430
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
+ E+ + PD TYN ++ ++G++ E +L M++ + +P +I+FN+++
Sbjct: 431 LEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLG 490
Query: 300 YGK-RQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
K + F+ +E L+ EK LP S ++
Sbjct: 491 MCKAHRVFEGIEL----LITMVEKGCLPNETSYVL 521
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 157/339 (46%), Gaps = 8/339 (2%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ LEV+R M + YS L+ GK+ +WL EM G +P+ Y
Sbjct: 303 EALEVYRVMMVDG-VVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSY--- 358
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
T + +AK +A KM+ E CKP+++T+ +L++ A + +F ++
Sbjct: 359 -TICIRVLGQAKRFDEAYRILAKMEN-EGCKPDVITHTVLIQVLCDAGRISDAKDVFWKM 416
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK-RQA 305
+S PD TY ++D +G NG + + + + MK++ +++ + +ID+ + +
Sbjct: 417 KKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRV 476
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
F+ +E +F + P ++NS+I + KA G A +F+ M P+ T+
Sbjct: 477 FEALE-MFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVL 535
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
I YG +A + ++ + G V NA+L +G A +F MG
Sbjct: 536 FINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMG 595
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
V+PD+ TY ++ K +KA+ + K+ M +N VP+
Sbjct: 596 VSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPD 634
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 145/322 (45%), Gaps = 9/322 (2%)
Query: 145 TGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKAL 204
TG+Y+ LI + + +A LF+EM+ GC PD YN L+ A K+ + + L
Sbjct: 880 TGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAM----GKSMRIEEML 935
Query: 205 GYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
++M KG E VTYN ++ ++R ++Q L+ L +P TY ++
Sbjct: 936 KVQEEMHRKGYES---TYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLL 992
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D K G I++ E++ + M CK + +N+L++ + +K+ +F+ ++
Sbjct: 993 DGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGIN 1052
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P + ++ +I KA F+++ M P ITY +I G + A +
Sbjct: 1053 PDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSL 1112
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
F+E+ K G + T N+++ G EA ++E G P+ TY L + Y+
Sbjct: 1113 FNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSV 1172
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
+ + RM G +PN
Sbjct: 1173 SGSTDSAYAAYGRMIVGGCLPN 1194
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 130/258 (50%), Gaps = 8/258 (3%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
LL + +GKS + + L+V M + + Y + Y+ +I+ + K + A+ L+ + +
Sbjct: 920 LLLDAMGKSMRIEEMLKVQEEMHR-KGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMS 978
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME-RCKPNIVTYNILLRACAQ 232
G P P Y L+ L KA + A F +M +E CK N YNILL
Sbjct: 979 QGFSPTPCTYGPLLDGLL----KAGRIEDAENLFNEM--LEYGCKANCTIYNILLNGHRI 1032
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
A N ++V LF+++ + + PDI +Y ++D K G + + + ++ +PD+IT
Sbjct: 1033 AGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLIT 1092
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+NLLID GK + ++ +F + P L T+NS+I++ GKA +A +++++
Sbjct: 1093 YNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELL 1152
Query: 353 AMKYTPSFITYECIITMY 370
+ P+ TY +I Y
Sbjct: 1153 TKGWKPNVFTYNALIRGY 1170
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 157/338 (46%), Gaps = 12/338 (3%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
EVF MQ+Q A+ G ++ + +G +G R A M+ +G + YN L+
Sbjct: 236 EVFDVMQRQ-IVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLV-- 292
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ K+ +AL ++ M ++ P++ TY++L+ A + R+V+ V L +E+
Sbjct: 293 --YFLVKSGFDREALEVYRVMM-VDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAH 349
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+ P++Y+Y + G+ E +L++M++ CKPD+IT +LI
Sbjct: 350 GVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDA 409
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECI 366
+ VF + S +KP T+ +++ +G G ++ V + AMK Y + + Y +
Sbjct: 410 KDVFWKMKKSDQKPDRVTYITLLDKFGD---NGDSQSVMEIWNAMKADGYNDNVVAYTAV 466
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I V A E+FDE+ + G + + N+++ + +A LF++ G
Sbjct: 467 IDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGP 526
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
P+ T+ L Y K+ + + M+ GIVP+
Sbjct: 527 KPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPD 564
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 144/329 (43%), Gaps = 8/329 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L ++ G + +E++ M K Y + Y+ +I + + G+ A+ +F EM+
Sbjct: 431 LLDKFGDNGDSQSVMEIWNAM-KADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQK 489
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P+ YN+LI+ L KA AL F+ M + KPN T+ + + ++
Sbjct: 490 GIVPEQYSYNSLISGFL----KADRFGDALELFKHMD-IHGPKPNGYTHVLFINYYGKSG 544
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ ++ + + PD+ N V+ K+G + + V +K+ PD IT+
Sbjct: 545 ESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYT 604
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++I K FD+ ++F ++ + P + NS+I KA +A +F ++ M
Sbjct: 605 MMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEM 664
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P+ TY ++ G V + +E+ + T N +L+ C NG +A
Sbjct: 665 NLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDA 724
Query: 415 -DLLFENSHNMGVTPDSSTYKLLYKAYTK 442
D+L+ + G PD S+Y + K
Sbjct: 725 LDMLYSMT-TKGCIPDLSSYNTVIYGLVK 752
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 168/429 (39%), Gaps = 61/429 (14%)
Query: 82 LVRVLMRSFSDKEPL----VRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQK 137
LV L++S D+E L V ++ V VR+ ++ GK L + R M+
Sbjct: 291 LVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMV--AFGKRRDVETVLWLLREMEA 348
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+ Y+ I V+G+ + A + ++M N GC+PD + LI A
Sbjct: 349 HG-VKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLC----DA 403
Query: 198 KALAKALGYFQKMKGMERCKP-----------------------------------NIVT 222
++ A F KMK ++ KP N+V
Sbjct: 404 GRISDAKDVFWKMKKSDQ-KPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVA 462
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y ++ A Q V + +F E+ + + P+ Y+YN ++ + K + + M
Sbjct: 463 YTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMD 522
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
+ KP+ T L I+ YGK K Q ++ + P + N+++ K+ G
Sbjct: 523 IHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLG 582
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM-------KV 395
A+ VF ++ AM +P ITY +I C S+ FDE K+ DM V
Sbjct: 583 MAKRVFHELKAMGVSPDTITYTMMIKC---CSKASK----FDEAVKIFYDMIENNCVPDV 635
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+N++++ G EA +F M + P TY L + + V LL+
Sbjct: 636 LAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEE 695
Query: 456 MEQNGIVPN 464
M + PN
Sbjct: 696 MYHSNYPPN 704
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 131/300 (43%), Gaps = 19/300 (6%)
Query: 121 KSDKWLQCLEVFRWMQ----KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGC 176
K+D++ LE+F+ M K Y + I GK G++ A+ + M++ G
Sbjct: 507 KADRFGDALELFKHMDIHGPKPNGYT-----HVLFINYYGKSGESIKAIQRYELMKSKGI 561
Query: 177 RPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
PD NA+ L K+ L A F ++K M P+ +TY ++++ C++A
Sbjct: 562 VPDVVAGNAV----LFGLAKSGRLGMAKRVFHELKAMG-VSPDTITYTMMIKCCSKASKF 616
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
D+ +F ++ E+ PD+ N ++D K G E + ++K +P T+N L
Sbjct: 617 DEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTL 676
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
+ G+ ++ + + + HS P L T+N+++ K A + MT
Sbjct: 677 LAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGC 736
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM--KVSTLNAMLEAYCMNGLPTEA 414
P +Y +I YG R E F ++ K + +TL +L ++ GL EA
Sbjct: 737 IPDLSSYNTVI--YGLVKE-ERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEA 793
>gi|302820365|ref|XP_002991850.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
gi|300140388|gb|EFJ07112.1| hypothetical protein SELMODRAFT_134282 [Selaginella moellendorffii]
Length = 425
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 151/345 (43%), Gaps = 6/345 (1%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
G+S + + ++ F+ + K + Y +I + K G LAM L +M +G PD
Sbjct: 25 GRSSRIHKVMDEFQELDKHGSK-PNAYTYKCVIQSLVKAGNVVLAMELLDKMIKTGLEPD 83
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQV 239
+ N + L KA + +A F MK M C + TY IL+R+ + + ++
Sbjct: 84 TLLCNVV----LDGLGKANMMDEACKLFASMKSMG-CPADDYTYAILIRSLGRCKRDEEA 138
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
LF E+ E P Y V+D Y K G I+ VL +M PD T N LI +
Sbjct: 139 TLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMVVLKKMLDKNLAPDDYTLNSLITA 198
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
+ + ++F+ + S +FN+M+ GKA G A +M A P+
Sbjct: 199 VSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPN 258
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
IT+ +I G S A ++ E+ G V T M+EA+ G +A +F
Sbjct: 259 SITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFG 318
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ G + + TY LL A KA + + + M++ GI+P+
Sbjct: 319 DMEKAGCSANVVTYNLLIDALVKAGRYQDARDIYFDMKKKGILPD 363
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 139/334 (41%), Gaps = 41/334 (12%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM 171
C ++ + LGK++ + ++F M K AD Y+ LI +G+ + A LF EM
Sbjct: 87 CNVVLDGLGKANMMDEACKLFASM-KSMGCPADDYTYAILIRSLGRCKRDEEATLLFDEM 145
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
GC P Y +I + CK
Sbjct: 146 EERGCTPSAPAYTNVIDIY-------------------------CK-------------- 166
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
A ++ + K++ + LAPD YT N ++ A + G + + RMK + + +
Sbjct: 167 -AGRIESAMVVLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTV 225
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
+FN ++D GK Q + KP TFN++I G+A+ +A V Q+M
Sbjct: 226 SFNAMLDCCGKAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEM 285
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+ TP TY C+I + N+ +A E+F ++ K G V T N +++A G
Sbjct: 286 RSAGLTPDVFTYTCMIEAFAKAGNMGKAFEMFGDMEKAGCSANVVTYNLLIDALVKAGRY 345
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+A ++ + G+ PD+ T +L + K +
Sbjct: 346 QDARDIYFDMKKKGILPDAITATVLQQLAGKCKL 379
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 138/312 (44%), Gaps = 5/312 (1%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
+ + ++++ CR V NA+I A+ ++ + K + FQ++ KPN TY +
Sbjct: 1 MLAAIQDTPCRYHVLVSNAVIAAY----GRSSRIHKVMDEFQELD-KHGSKPNAYTYKCV 55
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+++ +A NV L ++ ++ L PD N V+D GK M+ E + + MKS C
Sbjct: 56 IQSLVKAGNVVLAMELLDKMIKTGLEPDTLLCNVVLDGLGKANMMDEACKLFASMKSMGC 115
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
D T+ +LI S G+ + ++ +F + P+ P + ++I Y KA A
Sbjct: 116 PADDYTYAILIRSLGRCKRDEEATLLFDEMEERGCTPSAPAYTNVIDIYCKAGRIESAMV 175
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
V +KM P T +IT A EIF+ + K G + + NAML+
Sbjct: 176 VLKKMLDKNLAPDDYTLNSLITAVSRTGRTELACEIFERMKKSGVAVNTVSFNAMLDCCG 235
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
G A + G+ P+S T+ L +A K+L+ M G+ P+
Sbjct: 236 KAGKVGLAYQFMDEMEARGIKPNSITFNTLINCLGRAKYASEAYKVLQEMRSAGLTPDVF 295
Query: 467 FFLEALETFSSS 478
+ +E F+ +
Sbjct: 296 TYTCMIEAFAKA 307
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 172/408 (42%), Gaps = 68/408 (16%)
Query: 75 EELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCL-EVFR 133
E+L S +L+ + + + + LNK V V C +GK DK Q + E+ R
Sbjct: 395 EKLPSPDLLDLAEKIYGEMLAANCVLNK-VNVANFARCLC---GVGKFDKAFQLIKEMMR 450
Query: 134 WMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT 193
+ ++ DT YSK+I + + A LF EM+ G PD Y LI +
Sbjct: 451 -----KGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFC-- 503
Query: 194 RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP 253
KA + +A F++M+ + C P +VTY L+ A +A+ V Q N +F + ++ P
Sbjct: 504 --KAGLIEQAQWLFEEMRSVG-CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRP 560
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ----------CK------PDIITFNLLI 297
+ TY ++D K G I + V +++ C+ P+++T+ L+
Sbjct: 561 NDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALV 620
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
D K D ++ +++ S +P ++++I + KA A+ VF +MT Y
Sbjct: 621 DGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYL 680
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGK-DMKVSTLNAMLEAYCMNGLPTEADL 416
PS TY +I D + K G+ D+ + L+ ML+ C
Sbjct: 681 PSVHTYTSLI----------------DRMFKDGRLDLAMKVLSQMLKDSC---------- 714
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
TP+ TY + + E KLL ME+ G PN
Sbjct: 715 ----------TPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPN 752
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 141/342 (41%), Gaps = 40/342 (11%)
Query: 81 ELVRVLMRS--FSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQ 138
+L++ +MR D + + + E FLLF+E+ K
Sbjct: 443 QLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM-----------------KM 485
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
D Y+ LI K G A WLF EMR+ GC P Y ALI A+L KAK
Sbjct: 486 VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYL----KAK 541
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL------------ 246
+ +A F +M C+PN VTY L+ +A N+ + ++ +L
Sbjct: 542 QVPQANDIFHRMVD-AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFY 600
Query: 247 ----HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
LAP++ TY ++D K + +L M S+ C+P+ I ++ LID + K
Sbjct: 601 FPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCK 660
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
D ++VF + P++ T+ S+I K A V +M TP+ +T
Sbjct: 661 AGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVT 720
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
Y +I +A ++ + + G V T A+++
Sbjct: 721 YTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDG 762
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 152/380 (40%), Gaps = 69/380 (18%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
I + Y L++ KK Q + + M GC P+PS++N+L+ ++ + +D A A
Sbjct: 308 IPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYA-- 365
Query: 202 KALGYFQKMKGMERCK--PNIVTYNILLRA-CAQAR------------------------ 234
++ + M C P V YNI + + C Q +
Sbjct: 366 -----YKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVL 420
Query: 235 ---NV-------------DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
NV D+ L KE+ PD TY+ V+ +++ +
Sbjct: 421 NKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLF 480
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
MK PD+ T+ +LIDS+ K ++ + +F+ + PT+ T+ ++I Y KA
Sbjct: 481 QEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKA 540
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
+ +A +F +M P+ +TY ++ N+S+A E++ +L + T
Sbjct: 541 KQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKL--------IGTS 592
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
++ ++D F + P+ TY L KA+ + +LL M
Sbjct: 593 DS-----------ADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 641
Query: 459 NGIVPNKRFFLEALETFSSS 478
+G PN + ++ F +
Sbjct: 642 SGCEPNHIVYDALIDGFCKA 661
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 149/410 (36%), Gaps = 78/410 (19%)
Query: 128 CLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
C F W ++Q Y Y L +G G+ R A L E+ D V L+
Sbjct: 122 CARFFLWAERQVGYSHTGACYDALADALGFDGRARDAERLLREIGEE----DREVLGRLL 177
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
+ + +AL ++K +P+ VTYN L++ + A VD + KE+
Sbjct: 178 NVLVRRCCRGGMWNEALEELGRLKDFGY-RPSKVTYNALVQVLSSAGQVDLGFRVQKEMS 236
Query: 248 ESILAPDIYTYNGVMDAYGKNG-------MIK-------------------------EME 275
ES D +T A K G MI+ E
Sbjct: 237 ESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAM 296
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
S L RM+ N C P+++T+ L+ + K++ +++ +M P FNS++ +Y
Sbjct: 297 SFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSY 356
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIIT-------------------MYG----- 371
+ A + +MT P ++ Y I +YG
Sbjct: 357 CNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAA 416
Query: 372 ---------------YC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
C +A ++ E+ + G ST + ++ C +A
Sbjct: 417 NCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKA 476
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
LLF+ +GVTPD TY +L ++ KA + E Q L + M G P
Sbjct: 477 FLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPT 526
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 99/238 (41%), Gaps = 48/238 (20%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL---AKAL 204
Y+ LI K Q A +F M ++GCRP+ Y AL+ + +KA AK +
Sbjct: 530 YTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLI 589
Query: 205 G-------------------------YFQKMKGMER------------------CKPNIV 221
G Y + G+ + C+PN +
Sbjct: 590 GTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHI 649
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
Y+ L+ +A +D +F ++ + P ++TY ++D K+G + VLS+M
Sbjct: 650 VYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 709
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-KPTLPTFNSMIINYGKA 338
+ C P+++T+ +ID + +K ++ SLM K P + T+ ++I G++
Sbjct: 710 LKDSCTPNVVTYTAMIDGLCRIGESEKALKLL-SLMEEKGCSPNVVTYTALIDGLGQS 766
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 5/122 (4%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y LI K G+ A +F +M G P Y +LI K L A+
Sbjct: 650 VYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF----KDGRLDLAMKV 705
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+M + C PN+VTY ++ + ++ L + E +P++ TY ++D G
Sbjct: 706 LSQML-KDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLG 764
Query: 267 KN 268
++
Sbjct: 765 QS 766
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 175/392 (44%), Gaps = 13/392 (3%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI--YSKLIAVMGKKGQTRLAMWLFSEM 171
+L + L + K + VFR M K GI ++ LI K+G A L S M
Sbjct: 340 ILIDRLCREGKIEEANGVFRKMLKHGLC---PGIITFNALINGYCKEGWVVSAFQLLSVM 396
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
C+P+ YN L+ KA G+ P+ VTYNIL+
Sbjct: 397 EKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDN--GL---LPDRVTYNILVDGFC 451
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ ++ +F ++ + L PD +T+ ++D K G +++ +L M D +
Sbjct: 452 KEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEV 511
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
TF LID + K + +F++++ ++ T TFN + GK +A + KM
Sbjct: 512 TFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKM 571
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
PS +T+ +I + + + ++ + + + G V T ++ C NG
Sbjct: 572 MKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRV 631
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
EA+ + + + GV+P+ TY +L KA+ KA + +++ M +NG PN +
Sbjct: 632 EEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSAL 691
Query: 472 LETF--SSSLAGSQSGSAKTDL-TRSLSTAKS 500
L F S++ G+++ S+ DL RSLS+ ++
Sbjct: 692 LSGFVLSNTAIGARALSSTGDLDARSLSSEEN 723
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 160/382 (41%), Gaps = 46/382 (12%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
+ D + VF M K+ ++ YS LI + + G+ A L EM GC+P
Sbjct: 241 RRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPST 300
Query: 181 SVYNALITA--HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL-RACAQARNVD 237
Y LI A + DKA + + + C PN+ TY IL+ R C + + ++
Sbjct: 301 RTYTVLIKAKCDIGMTDKAMKMLDEMA-------TKACVPNVHTYTILIDRLCREGK-IE 352
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ N +F+++ + L P I T+N +++ Y K G + +LS M+ CKP+I T+N L+
Sbjct: 353 EANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELM 412
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+ + K + + ++ + P T+N ++ + K A +F M +
Sbjct: 413 EGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLE 472
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P T+ +I + +A I + K G + T A+++ +C G + L
Sbjct: 473 PDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFL 532
Query: 418 FEN---------SHNM--------------------------GVTPDSSTYKLLYKAYTK 442
FEN +H G+ P T+ +L + + +
Sbjct: 533 FENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCR 592
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
A L K+L+RM+Q G PN
Sbjct: 593 AGETALSLKMLERMKQAGCSPN 614
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 154/338 (45%), Gaps = 19/338 (5%)
Query: 131 VFRWMQKQRWYIADTGI-YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
V+R M + + + GI Y ++ + K G + A ++ G D V +L+ A
Sbjct: 181 VYRRMVNEGFVLG--GIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLA 238
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ D L +A F+KM E C+PN VTY+IL+ +A +++ L +E+ E
Sbjct: 239 NCRRDD----LGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK 294
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
P TY ++ A GM + +L M + C P++ T+ +LID + ++
Sbjct: 295 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 354
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECI 366
VF+ ++ P + TFN++I Y K +G FQ ++ M+ P+ TY +
Sbjct: 355 NGVFRKMLKHGLCPGIITFNALINGYCK---EGWVVSAFQLLSVMEKGNCKPNIRTYNEL 411
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVS---TLNAMLEAYCMNGLPTEADLLFENSHN 423
M G C VS++ + F L ++ + + T N +++ +C G A +F + ++
Sbjct: 412 --MEGLC-RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNS 468
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
G+ PD T+ L K E +L M + GI
Sbjct: 469 AGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGI 506
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/341 (20%), Positives = 133/341 (39%), Gaps = 28/341 (8%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++ LI + K G+ A + M G D + ALI H KAK +
Sbjct: 474 DGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKI-GKAKDVCF- 531
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F+ M RC T+N L A + +++ NA+ ++ + L P + T+ +++
Sbjct: 532 --LFENMV-ENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIE 588
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ + G +L RMK C P++ T+ ++I+ ++ E + S+ P
Sbjct: 589 GHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSP 648
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T+ ++ + KA +A + M P+ Y +++ + + AR +
Sbjct: 649 NHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALS 708
Query: 384 ---------------------DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
+E+ K G + N ++ C G EAD L ++
Sbjct: 709 STGDLDARSLSSEENDNNCLSNEIKKCGVPTE-DLYNFLVVGLCKEGRIIEADQLTQDMV 767
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
G+ PD + ++ + Y K + + +K + N VP
Sbjct: 768 KHGLFPDKAISSII-EHYCKTCKYDNCLEFMKLVLDNKFVP 807
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 78/184 (42%)
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
K C+P+ +T+++LI + ++ Q+ + ++ +P+ T+ +I +
Sbjct: 257 KEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMT 316
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
KA + +M P+ TY +I + A +F ++ K G + T NA+
Sbjct: 317 DKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNAL 376
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ YC G A L P+ TY L + + + LL+R+ NG+
Sbjct: 377 INGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGL 436
Query: 462 VPNK 465
+P++
Sbjct: 437 LPDR 440
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 91/222 (40%), Gaps = 11/222 (4%)
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y V++A KNG ++ E ++ D L+ + +R + +VF+ +
Sbjct: 197 YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKM- 255
Query: 318 HSKE---KPTLPTFNSMIINYGKARLQGKAEYVFQ---KMTAMKYTPSFITYECIITMYG 371
SKE +P T++ +I +A G+ E FQ +M PS TY +I
Sbjct: 256 -SKEENCRPNSVTYSILIHGLCEA---GRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKC 311
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+A ++ DE++ V T +++ C G EA+ +F G+ P
Sbjct: 312 DIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGII 371
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
T+ L Y K +LL ME+ PN R + E +E
Sbjct: 372 TFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELME 413
>gi|326520353|dbj|BAK07435.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 652
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 150/306 (49%), Gaps = 16/306 (5%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++S LI + + G A+ LFS +R +G RPD YNA I A+ K+ L A
Sbjct: 188 DLVLFSNLIHLALRAGDAPKALALFSRLRAAGIRPDLKAYNAAIAAYC----KSDLLRDA 243
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQ-ARNVDQVNALFKELHE-SILAPDIYTYNGV 261
+ P+ +Y +L A A+ R++ V+ LF + + + PD+ +N V
Sbjct: 244 KRLLLHDVPADGVAPDAESYAPVLAALARRGRHLAAVS-LFSHMRAVARVKPDLSVFNIV 302
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
++AYG+ + ++ + + M+ P ++T+N ++ YG F + +F LM+S
Sbjct: 303 LNAYGQLDLARDADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLF-GLMYSTA 361
Query: 322 -------KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
+P + T+N+MI +GKA KA + Q+M A P+ +TY +++++
Sbjct: 362 SDGGTVVRPNVVTYNTMIAIHGKALEDDKAGSLVQQMQASGIQPNAVTYSTVLSIWVKAG 421
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD-LLFENSHNMGVTPDSSTY 433
+ RA ++FD+L + G +M M+ AY GL +++ LL E H P +
Sbjct: 422 KLDRAAKLFDKLRESGTEMDPVLYQTMVVAYERAGLVSQSKRLLRELRHPDQAIPKETAM 481
Query: 434 KLLYKA 439
K+L A
Sbjct: 482 KILASA 487
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 147/330 (44%), Gaps = 13/330 (3%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
+ R AD YS L+A + + G A+ M PD +++ LI L D
Sbjct: 146 RARGVAADGFSYSTLLAALTRAGHLDHALTFLPLMEADAVAPDLVLFSNLIHLALRAGDA 205
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDI 255
KALA F +++ +P++ YN + A C D L ++ +APD
Sbjct: 206 PKALA----LFSRLRAAG-IRPDLKAYNAAIAAYCKSDLLRDAKRLLLHDVPADGVAPDA 260
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKS-NQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
+Y V+ A + G S+ S M++ + KPD+ FN+++++YG+ +++F
Sbjct: 261 ESYAPVLAALARRGRHLAAVSLFSHMRAVARVKPDLSVFNIVLNAYGQLDLARDADRLFW 320
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK------YTPSFITYECIIT 368
S+ + P++ T+N+M+ YG A L G+A ++F M + P+ +TY +I
Sbjct: 321 SMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFGLMYSTASDGGTVVRPNVVTYNTMIA 380
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
++G +A + ++ G T + +L + G A LF+ G
Sbjct: 381 IHGKALEDDKAGSLVQQMQASGIQPNAVTYSTVLSIWVKAGKLDRAAKLFDKLRESGTEM 440
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
D Y+ + AY +A + ++LL+ +
Sbjct: 441 DPVLYQTMVVAYERAGLVSQSKRLLRELRH 470
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 121/288 (42%), Gaps = 43/288 (14%)
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+V YN+LLRA ++A + + L E+ +A D ++Y+ ++ A + G + + L
Sbjct: 119 LVPYNLLLRAASRAGQLRLASGLLLEMRARGVAADGFSYSTLLAALTRAGHLDHALTFLP 178
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
M+++ PD++ F+ LI + K +F L + +P L +N+ I Y K+
Sbjct: 179 LMEADAVAPDLVLFSNLIHLALRAGDAPKALALFSRLRAAGIRPDLKAYNAAIAAYCKSD 238
Query: 340 L---------------------------------QGK---AEYVFQKMTAM-KYTPSFIT 362
L +G+ A +F M A+ + P
Sbjct: 239 LLRDAKRLLLHDVPADGVAPDAESYAPVLAALARRGRHLAAVSLFSHMRAVARVKPDLSV 298
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA----DLLF 418
+ ++ YG D A +F + + G V T N ML Y GL EA L++
Sbjct: 299 FNIVLNAYGQLDLARDADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFGLMY 358
Query: 419 ENSHNMG--VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ + G V P+ TY + + KA + L+++M+ +GI PN
Sbjct: 359 STASDGGTVVRPNVVTYNTMIAIHGKALEDDKAGSLVQQMQASGIQPN 406
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/296 (19%), Positives = 127/296 (42%), Gaps = 12/296 (4%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ L + + L + +F M+ D +++ ++ G+ R A LF MR +
Sbjct: 266 VLAALARRGRHLAAVSLFSHMRAVARVKPDLSVFNIVLNAYGQLDLARDADRLFWSMRRA 325
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM-----KGMERCKPNIVTYNILLRA 229
G P YN ++ + A +A+ F M G +PN+VTYN ++
Sbjct: 326 GVPPSVVTYNTMLRVY----GDAGLFGEAVHLFGLMYSTASDGGTVVRPNVVTYNTMIAI 381
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
+A D+ +L +++ S + P+ TY+ V+ + K G + + +++ + + D
Sbjct: 382 HGKALEDDKAGSLVQQMQASGIQPNAVTYSTVLSIWVKAGKLDRAAKLFDKLRESGTEMD 441
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
+ + ++ +Y + + +++ + L H + +P +M I R++ +A ++F+
Sbjct: 442 PVLYQTMVVAYERAGLVSQSKRLLRELRHPDQ--AIPKETAMKILASAGRVE-EAAWLFR 498
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+ + ++ ++ E+FDE+ KLG T+ + AY
Sbjct: 499 RAVHTGEVKDPSVHRAMMALFAKNRRHRSVVEVFDEMRKLGHLPDSETIAVTMNAY 554
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 81/169 (47%), Gaps = 8/169 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS ++++ K G+ A LF ++R SG DP +Y ++ A+ ++A ++++
Sbjct: 410 YSTVLSIWVKAGKLDRAAKLFDKLRESGTEMDPVLYQTMVVAY----ERAGLVSQSKRLL 465
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++++ ++ P IL A A V++ LF+ + D + +M + K
Sbjct: 466 RELRHPDQAIPKETAMKIL----ASAGRVEEAAWLFRRAVHTGEVKDPSVHRAMMALFAK 521
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
N + + V M+ PD T + +++YGK + FDK ++++L
Sbjct: 522 NRRHRSVVEVFDEMRKLGHLPDSETIAVTMNAYGKLKEFDKAAGLYRAL 570
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 161/336 (47%), Gaps = 7/336 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG-QTRLAMWLFSEMRN 173
L G+S + ++VF M K + + Y+ +I GK G + + + +F M +
Sbjct: 231 LISAYGRSGYCNEAIKVFDSM-KSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLS 289
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
+G +PD +N+L+ + +R A+ L KG+++ +I TYN LL A +
Sbjct: 290 NGVQPDRITFNSLLA--VCSRGGLWEAARRLFSAMVDKGIDQ---DIFTYNTLLDAVCKG 344
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+D + E+ + P++ TY+ ++D Y K G + + ++ + MK D +++
Sbjct: 345 GQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSY 404
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N L+ Y K F++ V K + ++ + + T+N+++ YGK + VF++M
Sbjct: 405 NTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKR 464
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
+ +P+ +TY +I +Y A E+F E + G V +A+++A C NGL
Sbjct: 465 GRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVES 524
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
+ L + G+ P+ TY + A+ ++ + V
Sbjct: 525 SVTLLDEMTKEGIRPNVVTYNSIIDAFGRSASAQCV 560
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 144/331 (43%), Gaps = 4/331 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+S LI+ G+ G A+ +F M+++G P+ YNA+I A K + F
Sbjct: 228 FSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDA---CGKGGVEFKKVVEIF 284
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
M +P+ +T+N LL C++ + LF + + + DI+TYN ++DA K
Sbjct: 285 DGMLS-NGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCK 343
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + ++S M + P+++T++ +ID Y K D +F + +
Sbjct: 344 GGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVS 403
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N+++ Y K +A V ++M +TY ++ YG R +F+E+
Sbjct: 404 YNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMK 463
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ + T + +++ Y GL EA +F G+ D Y L A K + E
Sbjct: 464 RGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVE 523
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
LL M + GI PN + ++ F S
Sbjct: 524 SSVTLLDEMTKEGIRPNVVTYNSIIDAFGRS 554
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 172/402 (42%), Gaps = 10/402 (2%)
Query: 63 WTRPRSKRGRK-SEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGK 121
+ RP++ R S LE+ L +V+ DK LN ++ + L ELG
Sbjct: 108 FGRPKTNMNRHTSVALEA--LQQVIQYGKDDKALENVLLNFESRLCGPDDYTFLLRELGN 165
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTG-IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
+ + F + ++ + G + S +I+ +G+ G+ LA +F G
Sbjct: 166 RGDSAKAVRCFEFAVRRESGKNEQGKLASAMISTLGRLGKVELAKAVFDTALKEGYGKTV 225
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR-NVDQV 239
++ALI+A+ ++ +A+ F MK PN+VTYN ++ AC + +V
Sbjct: 226 YAFSALISAY----GRSGYCNEAIKVFDSMKS-NGLMPNLVTYNAVIDACGKGGVEFKKV 280
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
+F + + + PD T+N ++ + G+ + + S M DI T+N L+D+
Sbjct: 281 VEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDA 340
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
K D ++ + P + T+++MI Y K A +F +M +
Sbjct: 341 VCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLD 400
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
++Y ++++Y +A ++ E+ G V T NA+L Y E +FE
Sbjct: 401 RVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFE 460
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
V+P+ TY L Y+K + + ++ + +Q G+
Sbjct: 461 EMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGL 502
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 151/329 (45%), Gaps = 54/329 (16%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH--LHTRDKAKALAKALG 205
Y+ L++V K G+ A+ + EM N+G R D YNAL+ + + D+ + +
Sbjct: 404 YNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRV----- 458
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
F++MK R PN++TY+ L+ ++ + +F+E ++ L D+ Y+ ++DA
Sbjct: 459 -FEEMK-RGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDAL 516
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD------------------ 307
KNG+++ ++L M +P+++T+N +ID++G+ +
Sbjct: 517 CKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSASAQCVVDDSGETTALQVESLS 576
Query: 308 --KMEQVFKSLMHSKEKPTLPTFNSMIINYGK--------ARLQGKAEY-----VFQKMT 352
+++ +S KE N +I +GK A+ GK E VFQKM
Sbjct: 577 SIVVQEAIESQAADKED------NRIIEIFGKLAAEKACEAKNSGKQEILCILGVFQKMH 630
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+K P+ +T+ I+ CD+ A + +EL +L + + +L Y N +
Sbjct: 631 ELKIKPNVVTFSAILNACSRCDSFEDASMLLEEL-RLFDNQVYGVAHGLLMGYREN-VWL 688
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+A LF+ M DSST Y A T
Sbjct: 689 QAQSLFDEVKLM----DSSTASAFYNALT 713
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 159/335 (47%), Gaps = 14/335 (4%)
Query: 148 YSKLIAVMGKKGQTRLAM--WLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALG 205
Y+ L+ +G +G + A+ + F+ R SG + +A+I+ L K + LAKA+
Sbjct: 156 YTFLLRELGNRGDSAKAVRCFEFAVRRESGKNEQGKLASAMIST-LGRLGKVE-LAKAV- 212
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+ +K E + ++ L+ A ++ ++ +F + + L P++ TYN V+DA
Sbjct: 213 FDTALK--EGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDAC 270
Query: 266 GKNGM-IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
GK G+ K++ + M SN +PD ITFN L+ + ++ ++F +++
Sbjct: 271 GKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQD 330
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAM---KYTPSFITYECIITMYGYCDNVSRARE 381
+ T+N+++ K G+ + F+ M+ M P+ +TY +I Y + A
Sbjct: 331 IFTYNTLLDAVCKG---GQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALN 387
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+F+E+ LG + + N +L Y G +A + + N G+ D TY L Y
Sbjct: 388 MFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYG 447
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
K + V+++ + M++ + PN + ++ +S
Sbjct: 448 KQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYS 482
>gi|255661186|gb|ACU25762.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 426
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 141/308 (45%), Gaps = 7/308 (2%)
Query: 134 WMQK--QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
W+QK Q D +YS LI + K A+ +FS ++ SG PD YNA+I
Sbjct: 31 WLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVF- 89
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KAK +A +M+ PN +Y LL + + + ++F E+ E
Sbjct: 90 ---GKAKLFREARSLISEMR-TAGVMPNTASYTTLLTMYVENKKFLEALSVFSEMREIKC 145
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
D+ T N ++D YG+ GM KE + + M+ +P+++++N L+ YG + F +
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 205
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+F+ + + T+NSM++ YGK KA + Q+M P+ ITY II+++G
Sbjct: 206 LFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWG 265
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ RA +F +L G ++ M+ AY GL A L + P +
Sbjct: 266 KAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYEKAGLVAHAKRLLHELKSPDNIPRDT 325
Query: 432 TYKLLYKA 439
+L A
Sbjct: 326 AIHILAGA 333
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 152/327 (46%), Gaps = 5/327 (1%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
++R D YS LI GK+G A+ +M D +Y+ LI D
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+KA++ F ++K P++V YN ++ +A+ + +L E+ + + P+
Sbjct: 61 SKAIS----IFSRLK-RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTA 115
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+Y ++ Y +N E SV S M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 116 SYTTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 175
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P + ++N+++ YG A L G+A ++F+ M + +TY ++ +YG
Sbjct: 176 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEH 235
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A + E+ G + T + ++ + G A +LF+ + GV D Y+ +
Sbjct: 236 EKANNLIQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTM 295
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVP 463
AY KA + ++LL ++ +P
Sbjct: 296 IVAYEKAGLVAHAKRLLHELKSPDNIP 322
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 108/217 (49%)
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
E L+PD YTY+ ++ +GK G+ S L +M+ ++ D++ ++ LI+ K +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
K +F L S P L +N+MI +GKA+L +A + +M P+ +Y ++
Sbjct: 62 KAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTTLL 121
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
TMY A +F E+ ++ + ++T N M++ Y G+ EAD LF MG+
Sbjct: 122 TMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
P+ +Y L + Y A + L + M++ IV N
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQN 218
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 150/360 (41%), Gaps = 42/360 (11%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L SEMR +G P+ + Y L+T ++
Sbjct: 71 KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTTLLTMYVEN--- 127
Query: 197 AKALAKALGYFQKMK--------------------------------GMER--CKPNIVT 222
K +AL F +M+ GM + +PN+V+
Sbjct: 128 -KKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 186
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
YN LLR A + LF+ + + ++ TYN +M YGK ++ +++ M+
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQ 246
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
+ +P+ IT++ +I +GK D+ +F+ L S + + +MI+ Y KA L
Sbjct: 247 NRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYEKAGLVA 306
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
A+ + ++ +P I + I + + A +F + G+ ++ M+
Sbjct: 307 HAKRLLHELK----SPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVRDITVFERMI 362
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+ +F+ +G PDS+ L+ AY K + + + M++ G V
Sbjct: 363 HLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANGVYMEMQEVGCV 422
>gi|242057231|ref|XP_002457761.1| hypothetical protein SORBIDRAFT_03g013016 [Sorghum bicolor]
gi|241929736|gb|EES02881.1| hypothetical protein SORBIDRAFT_03g013016 [Sorghum bicolor]
Length = 267
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 114/226 (50%), Gaps = 15/226 (6%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W LE+F ++KQ WY + Y++L+ ++GK Q A LF M + RP VY
Sbjct: 53 RWESALEIFELLRKQHWYEPRSQTYARLLMMLGKCRQPGPAAALFKAMLSERLRPTADVY 112
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
AL+ A+ ++ L +AL ++MKG CKP+ T++ +R D + A+
Sbjct: 113 TALVGAYGYS----GFLDEALAAVEQMKGAADCKPDGYTFS--------SRRFDLIPAVL 160
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGK 302
E+ + + +N ++D YGK M +EME LS M +S PDI T N +I +YG
Sbjct: 161 DEMSYLGIECNSVIHNAIIDGYGKAAMFEEMEGALSAMLESGSNVPDIYTMNSVIGAYGN 220
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
D+ME+ + +P TFN I +YGKA + K +F
Sbjct: 221 HGRTDEMEKSYSEFQLMGVEPDTKTFN--IKSYGKAGMYDKMMSIF 264
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 100/244 (40%), Gaps = 45/244 (18%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
AL F+ ++ +P TY LL + R ALFK + L P Y ++
Sbjct: 57 ALEIFELLRKQHWYEPRSQTYARLLMMLGKCRQPGPAAALFKAMLSERLRPTADVYTALV 116
Query: 263 DAYGKNGMIKEMESVLSRMK-SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
AYG +G + E + + +MK + CKPD TF+ + FD + V + +
Sbjct: 117 GAYGYSGFLDEALAAVEQMKGAADCKPDGYTFS--------SRRFDLIPAVLDEMSYLGI 168
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
+ N++I YGKA + F++M + ++ S +
Sbjct: 169 ECNSVIHNAIIDGYGKAAM-------FEEMEG--------------ALSAMLESGSNVPD 207
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
I+ T+N+++ AY +G E + + MGV PD+ T+ + K+Y
Sbjct: 208 IY-------------TMNSVIGAYGNHGRTDEMEKSYSEFQLMGVEPDTKTFNI--KSYG 252
Query: 442 KANM 445
KA M
Sbjct: 253 KAGM 256
>gi|410110069|gb|AFV61114.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
lycioides]
Length = 429
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 142/308 (46%), Gaps = 7/308 (2%)
Query: 134 WMQK--QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
W+QK Q D +YS LI + K A+ +FS ++ SG PD YNA+I
Sbjct: 33 WLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVF- 91
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KAK +A +M+ PN +Y+ LL + + + ++F E+ E
Sbjct: 92 ---GKAKLFREARSLISEMR-TAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIKC 147
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
D+ T N ++D YG+ GM KE + + M+ +P+++++N L+ YG + F +
Sbjct: 148 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 207
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+F+ + + T+NSM++ YGK KA + Q+M P+ ITY II+++G
Sbjct: 208 LFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWG 267
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ RA +F +L G ++ M+ AY GL A L + P +
Sbjct: 268 KVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKSPDNIPRDT 327
Query: 432 TYKLLYKA 439
+L A
Sbjct: 328 AIHILAGA 335
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 153/327 (46%), Gaps = 5/327 (1%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
+QR D YS LI GK+G A+ +M D +Y+ LI D
Sbjct: 3 RQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 62
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+KA++ F ++K P++V YN ++ +A+ + +L E+ + + P+
Sbjct: 63 SKAIS----IFSRLK-RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTA 117
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+Y+ ++ Y +N E SV S M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 118 SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 177
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P + ++N+++ YG A L G+A ++F+ M + +TY ++ +YG
Sbjct: 178 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEH 237
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A + E+ G + T + ++ + G A +LF+ + GV D Y+ +
Sbjct: 238 EKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTM 297
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVP 463
AY +A + ++LL ++ +P
Sbjct: 298 IVAYERAGLVAHAKRLLHELKSPDNIP 324
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 136/292 (46%), Gaps = 5/292 (1%)
Query: 170 EMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA 229
EMR PD Y+ LIT H K AL + QKM+ +R ++V Y+ L+
Sbjct: 1 EMRQRALSPDRYTYSTLIT-HF---GKEGLFDAALSWLQKME-QDRVPGDLVLYSNLIEL 55
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
+ + + ++F L S PD+ YN +++ +GK + +E S++S M++ P+
Sbjct: 56 SRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPN 115
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
+++ L+ Y + + F + VF + K L T N MI YG+ + +A+ +F
Sbjct: 116 TASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFW 175
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
M M P+ ++Y ++ +YG + A +F + + V T N+M+ Y
Sbjct: 176 GMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTL 235
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+A+ L + N G+ P+S TY + + K + L +++ +G+
Sbjct: 236 EHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 287
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 110/220 (50%)
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
E+ + L+PD YTY+ ++ +GK G+ S L +M+ ++ D++ ++ LI+ K
Sbjct: 1 EMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLC 60
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
+ K +F L S P L +N+MI +GKA+L +A + +M P+ +Y
Sbjct: 61 DYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYS 120
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
++TMY A +F E+ ++ + ++T N M++ Y G+ EAD LF M
Sbjct: 121 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 180
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G+ P+ +Y L + Y A + L + M++ IV N
Sbjct: 181 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQN 220
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 151/360 (41%), Gaps = 42/360 (11%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L SEMR +G P+ + Y+ L+T ++
Sbjct: 73 KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVEN--- 129
Query: 197 AKALAKALGYFQKMK--------------------------------GMER--CKPNIVT 222
K +AL F +M+ GM + +PN+V+
Sbjct: 130 -KKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 188
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
YN LLR A + LF+ + + ++ TYN +M YGK ++ +++ M+
Sbjct: 189 YNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQ 248
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
+ +P+ IT++ +I +GK D+ +F+ L S + + +MI+ Y +A L
Sbjct: 249 NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVA 308
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
A+ + ++ +P I + I + + A +F + G+ ++ M+
Sbjct: 309 HAKRLLHELK----SPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMI 364
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+ +F+ +G PDS+ L+ AY K + + + M++ G V
Sbjct: 365 HLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANGVYMEMQEVGCV 424
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 167/369 (45%), Gaps = 16/369 (4%)
Query: 106 VVRSEHCF-LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLA 164
+V HCF +L K + L +F M+ Q + Y+ +IA + + G+ A
Sbjct: 443 IVADSHCFNILINAHAKRGMMDEALLIFTEMRGQ-GVSPNVVTYATVIAALCRMGRLADA 501
Query: 165 MWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYN 224
M S+M + G +P+ VY++LI D KA K L +G+ R PNI ++
Sbjct: 502 MEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKA--KELVSEMMDQGIPR--PNITFFS 557
Query: 225 ILLRA-CAQAR--NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
++ + C + R N V L + + PDI+T+N ++D Y G + + VL M
Sbjct: 558 SIIHSLCNEGRVMNAQDVFNLVIHIGDR---PDIFTFNSLIDGYCLVGKMDKAFGVLDAM 614
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
S +PD++T++ LI+ Y K D +F+ ++ + KPT T++ ++ +A
Sbjct: 615 VSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRT 674
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLN 399
A+ +F +M S TY I + G C N A +F +L + +++ LN
Sbjct: 675 SAAKKMFHEMIESGTAMSISTYT--IILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILN 732
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
M+ A EA LF + G+ P++STY ++ K E + ME+
Sbjct: 733 TMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKT 792
Query: 460 GIVPNKRFF 468
G P+ R
Sbjct: 793 GCAPSSRLL 801
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 139/322 (43%), Gaps = 5/322 (1%)
Query: 156 GKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER 215
K+ L+M L M GC PD YN +I + +AL L +M +
Sbjct: 213 AKRTDEALSM-LLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLL----RMTKGDG 267
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
C P++V+Y +++ + + LF E+ + + P++ TYN ++ A K + + E
Sbjct: 268 CSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAE 327
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
VL +M N +PD +T+ +I Y + + ++FK + P + TFNS++ +
Sbjct: 328 LVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSL 387
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
K + +A +F + + P I+Y ++ Y +F ++ G
Sbjct: 388 CKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADS 447
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
N ++ A+ G+ EA L+F GV+P+ TY + A + + L +
Sbjct: 448 HCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQ 507
Query: 456 MEQNGIVPNKRFFLEALETFSS 477
M G+ PN + ++ F +
Sbjct: 508 MISIGLKPNTVVYHSLIQGFCT 529
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 175/405 (43%), Gaps = 24/405 (5%)
Query: 45 RHIPLSLRTRPRTGI----CCVWTRPRS---------KRGRKSEELESKELVRVLMRSFS 91
R +PL++ T GI CC RP + G +++ + + ++ L +
Sbjct: 159 RVVPLTVHTY---GILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKR 215
Query: 92 DKEPLVRTLNKYVKVVRSEHCF---LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIY 148
E L L++ ++ F + + L + + L++ M K D Y
Sbjct: 216 TDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSY 275
Query: 149 SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQ 208
+ +I + +G+ A LF+EM G P+ YN+++ H KA+A+ KA +
Sbjct: 276 TMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIV----HALCKARAMDKAELVLR 331
Query: 209 KMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
+M +P+ VTY ++ + + +FKE+ L PDI T+N +MD+ K+
Sbjct: 332 QMFD-NSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKH 390
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
KE + + + KPDII++++L+ Y F M +F S+ + F
Sbjct: 391 KRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCF 450
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
N +I + K + +A +F +M +P+ +TY +I ++ A E ++
Sbjct: 451 NILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMIS 510
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+G +++++ +C +G +A L + G+ + T+
Sbjct: 511 IGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITF 555
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 110/251 (43%), Gaps = 1/251 (0%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
IVT L C R + ++ L + E PD ++YN V+ + +E +L
Sbjct: 200 GIVTNTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDML 259
Query: 279 SRM-KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
RM K + C PD++++ ++I K +F ++ P + T+NS++ K
Sbjct: 260 LRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCK 319
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
AR KAE V ++M P +TY +I Y A ++F E+++ G + T
Sbjct: 320 ARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVT 379
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
N+++++ C + EA +F + G PD +Y +L Y + L M
Sbjct: 380 FNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMT 439
Query: 458 QNGIVPNKRFF 468
NGIV + F
Sbjct: 440 DNGIVADSHCF 450
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 133/326 (40%), Gaps = 10/326 (3%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E+ M Q + +S +I + +G+ A +F+ + + G RPD +N+LI
Sbjct: 538 ELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDG 597
Query: 190 HLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
+ + KA G M G E P++VTY+ L+ ++ +D LF+E+
Sbjct: 598 YC----LVGKMDKAFGVLDAMVSAGTE---PDVVTYSTLINGYFKSGRIDDGLILFREML 650
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
+ P TY+ V+D + G + + M + I T+ +++ + D
Sbjct: 651 CKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTD 710
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
+ +F L K + N+MI K + + +A +F ++A P+ TY +I
Sbjct: 711 EAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMI 770
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
+V A +F + K G LN ++ G +A ++
Sbjct: 771 INLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIIS 830
Query: 428 PDSSTYKLLYKAY-TKANMKELVQKL 452
++ST LL + +K +E ++ L
Sbjct: 831 LEASTTSLLISLFASKGRYREQIKFL 856
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 88/212 (41%), Gaps = 15/212 (7%)
Query: 276 SVLSRMKSNQCKPDII-----TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
++ +R+ + P ++ T+ +L+D + + D F L+ + + N+
Sbjct: 146 ALFNRICREEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNT 205
Query: 331 MI--INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
+ + Y K R + +M+ + P +Y +I C SR++E D L +
Sbjct: 206 FLKCLCYAK-RTDEALSMLLHRMSELGCVPDAFSYNTVIK--SLCGG-SRSQEALDMLLR 261
Query: 389 L----GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ G V + ++ M G ++A LF GV P+ TY + A KA
Sbjct: 262 MTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKAR 321
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+ + +L++M N I P++ + + +S
Sbjct: 322 AMDKAELVLRQMFDNSIQPDEVTYTAMIHGYS 353
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 154/316 (48%), Gaps = 17/316 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + K G TR A+ L ++ +P+ +Y+ +I A K + +++A G F
Sbjct: 167 YATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALC----KYQLVSEAYGLF 222
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M KG+ ++VTY+ L+ + + L E+ + P++YTYN ++DA
Sbjct: 223 SEMTVKGIS---ADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G +KE +SVL+ M KPD+IT++ L+D Y K + VF ++ P +
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIF 383
T+ +I + K ++ +A +F++M P +TY +I G C + + ++
Sbjct: 340 HTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID--GLCKSGRIPYVWDLI 397
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
DE+ G+ V T +++++ C NG A LF + + P+ T+ +L K
Sbjct: 398 DEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKG 457
Query: 444 ----NMKELVQKLLKR 455
+ +E+ Q LL +
Sbjct: 458 GRLKDAQEVFQDLLTK 473
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 144/322 (44%), Gaps = 9/322 (2%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
AD YS LI +G+ + A+ L +EM P+ YN L+ A L K K
Sbjct: 232 ADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDA-LCKEGKVKEAKS 290
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
L K KP+++TY+ L+ V + +F + + PD++TY ++
Sbjct: 291 VLAVMLK----ACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILI 346
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+ + KN M+ E ++ M P I+T++ LID K + + + +
Sbjct: 347 NGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQP 406
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAR 380
+ T++S+I K +A +F KM + P+ T+ I + G C + A+
Sbjct: 407 ADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFT--ILLDGLCKGGRLKDAQ 464
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
E+F +L G + V T N M+ +C GL EA + + G P++ T++ + A
Sbjct: 465 EVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIAL 524
Query: 441 TKANMKELVQKLLKRMEQNGIV 462
K + + +KLL++M G++
Sbjct: 525 FKKDENDKAEKLLRQMIARGLL 546
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 125/331 (37%), Gaps = 47/331 (14%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
LI GQ + +++ G PD N LI L + + K KAL + K+
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKG-LCLKGQVK---KALHFHDKL 155
Query: 211 KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
+ + N V+Y L+ + + L +++ + P++ Y+ ++DA K +
Sbjct: 156 LA-QGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQL 214
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
+ E + S M D++T++ LI + + + ++ P + T+N
Sbjct: 215 VSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNI 274
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
++ K +A+ V M P ITY ++ Y V +A+ +F+ +S
Sbjct: 275 LVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSL-- 332
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
MGVTPD TY +L + K M +
Sbjct: 333 ---------------------------------MGVTPDVHTYTILINGFCKNKMVDEAL 359
Query: 451 KLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
L K M Q +VP + T+SS + G
Sbjct: 360 NLFKEMHQKNMVP-------GIVTYSSLIDG 383
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 40/181 (22%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
+ R AD YS LI + K G A+ LF++M++ R
Sbjct: 401 RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIR------------------- 441
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
PNI T+ ILL + + +F++L ++Y
Sbjct: 442 ---------------------PNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVY 480
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TYN +++ + K G+++E ++LS+M+ N C P+ TF +I + K+ DK E++ + +
Sbjct: 481 TYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQM 540
Query: 317 M 317
+
Sbjct: 541 I 541
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 151/344 (43%), Gaps = 14/344 (4%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
+++ R M++Q +Y+ + + K G+ AM + M++ C+PD +N LI
Sbjct: 38 MDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIA 97
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERC--KPNIVTYNILLRACAQARNVDQVNALFKEL 246
KA L +A Q + MER N+VTYN L+ + A + + + +
Sbjct: 98 GLC----KAGRLDEAQ---QVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGM 150
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ-CKPDIITFNLLIDSYGKRQA 305
+ PD TYN ++ + K+G I L MK C PD T+++LI+ K
Sbjct: 151 TTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSN 207
Query: 306 FDKMEQVFKSLMHSKEK-PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
K +++ + ++ K+ ++ FN+++ Y KA+ +A + M P +TY
Sbjct: 208 LRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYS 267
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
II C +V + + +++ G V T ++ C G EA L +
Sbjct: 268 TIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLED 327
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G TP++ TY L++ K + ++ LL + G V + F
Sbjct: 328 GCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAF 371
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 11/324 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEM-RNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
D Y L+ G+ + AM L EM + G P PS+YN + H K+ + +
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFV----HALCKSGKVPE 72
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A+ + MK CKP++VT+N L+ +A +D+ + E+ S A ++ TYN ++
Sbjct: 73 AMEVVKNMKD-GACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLI 131
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL-MHSKE 321
+ G E V+ M + PD T+N +I + K D+ + + +
Sbjct: 132 NGLSSAGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGC 188
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK-YTPSFITYECIITMYGYCDNVSRAR 380
P T++ +I K+ KA+ + Q+M K S + + ++ Y ++ RAR
Sbjct: 189 SPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRAR 248
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
E+ + + G V T + +++ C G + L E + G PD TY +L
Sbjct: 249 ELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGL 308
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
KA +L+KRM ++G PN
Sbjct: 309 CKAGKMVEACRLVKRMLEDGCTPN 332
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 130/289 (44%), Gaps = 9/289 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L K+ + + +V M++ + A+ Y+ LI + G++ A+ + M +
Sbjct: 95 LIAGLCKAGRLDEAQQVLDEMERS-GFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTT 153
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
PD YNA+I H K+ + +A G+ ++MK C P+ TY+IL+ ++
Sbjct: 154 ---PDTQTYNAII----HGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSS 206
Query: 235 NVDQVNALFKE-LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
N+ + + L +E + + +N ++D Y K + +LS M + C PD++T+
Sbjct: 207 NLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTY 266
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+ +ID + DK + + ++ KP + T+ ++ KA +A + ++M
Sbjct: 267 STIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLE 326
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
TP+ +TY + D + A ++ + G+ V +L
Sbjct: 327 DGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 102/239 (42%), Gaps = 35/239 (14%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRN-SGCRPDPSVYNALITAHLHTRDKAKA--- 199
DT Y+ +I K G+ A EM+ +GC PD Y+ LI + + KA
Sbjct: 155 DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADEL 214
Query: 200 LAKALGY----------------FQKMKGMER------------CKPNIVTYNILLRACA 231
L + +G + K + ++R C P++VTY+ ++
Sbjct: 215 LQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLC 274
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ +VD+ AL +++ PD+ TY ++ K G + E ++ RM + C P+ +
Sbjct: 275 RCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAV 334
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
T++L+ D K D + S+ + F +++++ K RL +A FQK
Sbjct: 335 TYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLLSV-KKRLLDRA--AFQK 390
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 78/190 (41%), Gaps = 5/190 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L L KS + E+ + M ++ A ++ L+ K A L S M
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE 256
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
GC PD Y+ +I D K A +KM CKP++VTY +L+ +A
Sbjct: 257 HGCAPDVVTYSTIIDGLCRCGDVDKGFA----LLEKMVS-RGCKPDVVTYTVLVTGLCKA 311
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ + L K + E P+ TY+ V D K + +L+ ++ D++ F
Sbjct: 312 GKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAF 371
Query: 294 NLLIDSYGKR 303
L+ S KR
Sbjct: 372 ETLLLSVKKR 381
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 154/348 (44%), Gaps = 15/348 (4%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
+++ R M++Q +Y+ + + K G+ AM + M++ C+PD +N LI
Sbjct: 38 MDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIA 97
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERC--KPNIVTYNILLRACAQARNVDQVNALFKEL 246
KA L +A Q + MER N+VTYN L+ + A + + + +
Sbjct: 98 GLC----KAGRLDEAQ---QVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGM 150
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ-CKPDIITFNLLIDSYGKRQA 305
+ PD TYN ++ + K+G I L MK C PD T+++LI+ K
Sbjct: 151 TTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSN 207
Query: 306 FDKMEQVFKSLMHSKEK-PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
K +++ + ++ K+ ++ FN+++ Y KA+ +A + M P +TY
Sbjct: 208 LRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYS 267
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
II C +V + + +++ G V T ++ C G EA L +
Sbjct: 268 TIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLED 327
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
G TP++ TY L++ K + ++ LL + G + + F EAL
Sbjct: 328 GCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAF-EAL 374
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 11/324 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEM-RNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
D Y L+ G+ + AM L EM + G P PS+YN + H K+ + +
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFV----HALCKSGKVPE 72
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A+ + MK CKP++VT+N L+ +A +D+ + E+ S A ++ TYN ++
Sbjct: 73 AMEVVKNMKD-GACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLI 131
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL-MHSKE 321
+ G E V+ M + PD T+N +I + K D+ + + +
Sbjct: 132 NGLSSAGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGC 188
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK-YTPSFITYECIITMYGYCDNVSRAR 380
P T++ +I K+ KA+ + Q+M K S + + ++ Y ++ RAR
Sbjct: 189 SPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRAR 248
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
E+ + + G V T + +++ C G + L E + G PD TY +L
Sbjct: 249 ELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGL 308
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
KA +L+KRM ++G PN
Sbjct: 309 CKAGKMVEACRLVKRMLEDGCTPN 332
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 131/289 (45%), Gaps = 9/289 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L K+ + + +V M++ + A+ Y+ LI + G++ A+ + M +
Sbjct: 95 LIAGLCKAGRLDEAQQVLDEMERS-GFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTT 153
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
PD YNA+I H K+ + +A G+ ++MK C P+ TY+IL+ ++
Sbjct: 154 ---PDTQTYNAII----HGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSS 206
Query: 235 NVDQVNALFKE-LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
N+ + + L +E + + +N ++D Y K + +LS M + C PD++T+
Sbjct: 207 NLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTY 266
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+ +ID + DK + + ++ KP + T+ ++ KA +A + ++M
Sbjct: 267 STIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLE 326
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
TP+ +TY + D + A ++ + G+ V A+L
Sbjct: 327 DGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALL 375
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 102/239 (42%), Gaps = 35/239 (14%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRN-SGCRPDPSVYNALITAHLHTRDKAKA--- 199
DT Y+ +I K G+ A EM+ +GC PD Y+ LI + + KA
Sbjct: 155 DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADEL 214
Query: 200 LAKALGY----------------FQKMKGMER------------CKPNIVTYNILLRACA 231
L + +G + K + ++R C P++VTY+ ++
Sbjct: 215 LQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLC 274
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ +VD+ AL +++ PD+ TY ++ K G + E ++ RM + C P+ +
Sbjct: 275 RCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAV 334
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
T++L+ D K D + S+ + F +++++ K RL +A FQK
Sbjct: 335 TYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALLLSV-KKRLLDRA--AFQK 390
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 78/190 (41%), Gaps = 5/190 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L L KS + E+ + M ++ A ++ L+ K A L S M
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE 256
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
GC PD Y+ +I D K A +KM CKP++VTY +L+ +A
Sbjct: 257 HGCAPDVVTYSTIIDGLCRCGDVDKGFA----LLEKMVS-RGCKPDVVTYTVLVTGLCKA 311
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ + L K + E P+ TY+ V D K + +L+ ++ D++ F
Sbjct: 312 GKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAF 371
Query: 294 NLLIDSYGKR 303
L+ S KR
Sbjct: 372 EALLLSVKKR 381
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 138/318 (43%), Gaps = 4/318 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + +G+ A+ + +MR +GC P+ YN L+ A +A L A
Sbjct: 155 YNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFC----RAGELDGAERVV 210
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
M+ KPN+VT+N ++ +A ++ +F E+ LAPD+ +YN ++ Y K
Sbjct: 211 SLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCK 270
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + E +V S M PD++TF LI + K ++ + + + T
Sbjct: 271 VGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVT 330
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
F ++I + K A ++M PS + Y +I Y + ARE+ E+
Sbjct: 331 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREME 390
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
V T + ++ YC G A L + GV PD+ TY L + +
Sbjct: 391 AKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLN 450
Query: 448 LVQKLLKRMEQNGIVPNK 465
+L + M Q G+ P++
Sbjct: 451 DACELFENMLQLGVQPDE 468
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 152/321 (47%), Gaps = 13/321 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ ++ + K G+ A +F EM G PD YN L++ + K L ++L F
Sbjct: 226 FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC----KVGCLHESLAVF 281
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M +G+ P++VT+ L+ A +A N++Q AL ++ E L + T+ ++D +
Sbjct: 282 SEMTQRGL---VPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGF 338
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G + + + M+ +P ++ +N LI+ Y K D ++ + + + KP +
Sbjct: 339 CKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDV 398
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIF 383
T++++I Y K A + QKM P ITY +I G C+ ++ A E+F
Sbjct: 399 VTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIR--GLCEEKRLNDACELF 456
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ + +LG T +++ +C G +A L + GV PD TY +L +K+
Sbjct: 457 ENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKS 516
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+ +LL ++ VP+
Sbjct: 517 ARTKEAHRLLFKLYHEDPVPD 537
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 175/394 (44%), Gaps = 27/394 (6%)
Query: 73 KSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVF 132
++ EL+ E V LMR + +P + T N V L K+ + +VF
Sbjct: 199 RAGELDGAERVVSLMREEGNAKPNLVTFNSMVN------------GLCKAGRMEGARKVF 246
Query: 133 RWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH 192
M ++ D Y+ L++ K G ++ +FSEM G PD + +LI H
Sbjct: 247 DEMVRE-GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLI----H 301
Query: 193 TRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KA L +A+ +M+ ER + N VT+ L+ + +D +E+ + +
Sbjct: 302 ATCKAGNLEQAVALVAQMR--ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGI 359
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
P + YN +++ Y K G + ++ M++ + KPD++T++ +I Y K D Q
Sbjct: 360 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 419
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+ + ++ P T++S+I + + A +F+ M + P TY +I G
Sbjct: 420 LNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLID--G 477
Query: 372 YC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD-LLFENSHNMGVTP 428
+C NV +A + DE+ + G V T + ++ + EA LLF+ H V P
Sbjct: 478 HCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPV-P 536
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
D+ Y L +KA K +V LLK G++
Sbjct: 537 DNIKYDALMLCCSKAEFKSVVA-LLKGFCMKGLM 569
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 132/304 (43%), Gaps = 52/304 (17%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P++ YN +L A + A ++ + +AP++YTYN ++ A G ++E V
Sbjct: 116 PSVPAYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK--EKPTLPTFNSMIINY 335
+ M+ C P+ +T+N L+ ++ + D E+V SLM + KP L TFNSM+
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVV-SLMREEGNAKPNLVTFNSMVNGL 233
Query: 336 GKA-RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--------------------- 373
KA R++G A VF +M P ++Y +++ GYC
Sbjct: 234 CKAGRMEG-ARKVFDEMVREGLAPDVVSYNTLLS--GYCKVGCLHESLAVFSEMTQRGLV 290
Query: 374 ----------------DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
N+ +A + ++ + G M T A+++ +C G +A L
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
E G+ P Y L Y K +L ++L++ ME + P+ + T+S+
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPD-------VVTYST 403
Query: 478 SLAG 481
++G
Sbjct: 404 IISG 407
>gi|410110143|gb|AFV61151.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
velutina]
Length = 382
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 133/276 (48%), Gaps = 5/276 (1%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
D +YS LI + K A+ +FS ++ SG PD YNA+I KAK +
Sbjct: 3 GDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVF----GKAKLFRE 58
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A +MK PN +Y+ LL + + + ++F E+ E D+ T N ++
Sbjct: 59 ARSLISEMK-TAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMI 117
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D YG+ GM KE + + M+ +P+++++N L+ YG + F + +F+ + +
Sbjct: 118 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 177
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
+ T+NSM++ YGK KA + Q+M + P+ ITY II+++G + RA +
Sbjct: 178 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAML 237
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
F +L G ++ M+ AY GL A L
Sbjct: 238 FQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLL 273
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 130/263 (49%), Gaps = 1/263 (0%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+KA+ F ++K P++V YN ++ +A+ + +L E+ + + P+ +Y+
Sbjct: 22 SKAISIFSRLK-RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYST 80
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ Y +N E SV S M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 81 LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 140
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P + ++N+++ YG A L G+A ++F+ M + +TY ++ +YG +A
Sbjct: 141 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 200
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ E+ G + T + ++ + G A +LF+ + GV D ++ + AY
Sbjct: 201 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY 260
Query: 441 TKANMKELVQKLLKRMEQNGIVP 463
+A + ++LL +++ +P
Sbjct: 261 ERAGLVAHAKRLLHELKRPDNIP 283
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 149/331 (45%), Gaps = 15/331 (4%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L SEM+ +G P+ + Y+ L+T ++
Sbjct: 32 KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVEN--- 88
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
K +AL F +M+ + +C ++ T NI++ Q + + LF + + + P++
Sbjct: 89 -KKFLEALSVFSEMREI-KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVV 146
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+YN ++ YG + E + M+ + +++T+N ++ YGK +K + + +
Sbjct: 147 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEM 206
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P T++++I +GK +A +FQK+ + I ++ +I Y V
Sbjct: 207 QSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLV 266
Query: 377 SRAREIFDELSK---LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ A+ + EL + + +D + L G EA +F + + G D + +
Sbjct: 267 AHAKRLLHELKRPDNIPRDTAIHILAGA-------GRIEEATYVFRQAVDAGEVKDITVF 319
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ + +K V ++ +M G P+
Sbjct: 320 ERMVHLLSKYKKYSNVVEVFDKMRGLGYFPD 350
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 119/250 (47%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
++V Y+ L+ + + + ++F L S PD+ YN +++ +GK + +E S++
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
S MK+ P+ +++ L+ Y + + F + VF + K L T N MI YG+
Sbjct: 64 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
+ +A+ +F M M P+ ++Y ++ +YG + A +F + + + V T
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 183
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N+M+ Y +A+ L + + G+ P+S TY + + K + L +++
Sbjct: 184 NSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 243
Query: 459 NGIVPNKRFF 468
+G+ ++ F
Sbjct: 244 SGVEIDQILF 253
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 128/298 (42%), Gaps = 37/298 (12%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
K+L+ L VF M++ + + D + +I V G+ G + A LF MR G P+ Y
Sbjct: 90 KFLEALSVFSEMREIKCLL-DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSY 148
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
N L+ + A+ +A+ F+ M+ + + N+VTYN ++ + ++ N L
Sbjct: 149 NTLLRVY----GDAELFGEAIHLFRLMQ-RKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 203
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY--- 300
+E+ + P+ TY+ ++ +GK G + + +++S+ + D I F +I +Y
Sbjct: 204 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERA 263
Query: 301 -----GKRQAFD--------------------KMEQ---VFKSLMHSKEKPTLPTFNSMI 332
KR + ++E+ VF+ + + E + F M+
Sbjct: 264 GLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAVDAGEVKDITVFERMV 323
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
K + VF KM + Y P ++ YG +A +++ E+ ++G
Sbjct: 324 HLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVG 381
>gi|410110085|gb|AFV61122.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
fucata]
Length = 382
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 141/294 (47%), Gaps = 6/294 (2%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
D +YS LI + K A+ +FS ++ SG PD YNA+I KAK +
Sbjct: 3 GDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVF----GKAKLFRE 58
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A +MK PN +Y+ LL + + + ++F E+ E D+ T N ++
Sbjct: 59 ARSLIGEMKA-AGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMI 117
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D YG+ GM KE + + M+ +P+++++N L+ YG + F + +F+ + +
Sbjct: 118 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 177
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
+ T+NSM++ YGK KA + Q+M + P+ ITY II+++G + RA +
Sbjct: 178 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAML 237
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD-LLFENSHNMGVTPDSSTYKL 435
F +L G ++ M+ AY GL A LL E + D++ + L
Sbjct: 238 FQKLRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL 291
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 130/263 (49%), Gaps = 1/263 (0%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+KA+ F ++K P++V YN ++ +A+ + +L E+ + + P+ +Y+
Sbjct: 22 SKAISIFSRLK-RSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTTSYST 80
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ Y +N E SV S M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 81 LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 140
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P + ++N+++ YG A L G+A ++F+ M + +TY ++ +YG +A
Sbjct: 141 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 200
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ E+ G + T + ++ + G A +LF+ + G+ D ++ + AY
Sbjct: 201 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTMIVAY 260
Query: 441 TKANMKELVQKLLKRMEQNGIVP 463
+A + ++LL +++ +P
Sbjct: 261 ERAGLVAHAKRLLHELKRPDNIP 283
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 148/331 (44%), Gaps = 15/331 (4%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L EM+ +G P+ + Y+ L+T ++
Sbjct: 32 KRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTTSYSTLLTMYVEN--- 88
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
K +AL F +M+ + +C ++ T NI++ Q + + LF + + + P++
Sbjct: 89 -KKFLEALSVFSEMREI-KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVV 146
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+YN ++ YG + E + M+ + +++T+N ++ YGK +K + + +
Sbjct: 147 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEM 206
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P T++++I +GK +A +FQK+ + I ++ +I Y V
Sbjct: 207 QSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTMIVAYERAGLV 266
Query: 377 SRAREIFDELSK---LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ A+ + EL + + +D + L G EA +F + + G D + +
Sbjct: 267 AHAKRLLHELKRPDNIPRDTAIHILAG-------AGRIEEATYVFRQAIDAGEVKDITVF 319
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ + +K V ++ +M G P+
Sbjct: 320 ERMIHLLSKYKKYSNVVEVFDKMRGLGYFPD 350
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 118/250 (47%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
++V Y+ L+ + + + ++F L S PD+ YN +++ +GK + +E S++
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
MK+ P+ +++ L+ Y + + F + VF + K L T N MI YG+
Sbjct: 64 GEMKAAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
+ +A+ +F M M P+ ++Y ++ +YG + A +F + + + V T
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 183
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N+M+ Y +A+ L + + G+ P+S TY + + K + L +++
Sbjct: 184 NSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 243
Query: 459 NGIVPNKRFF 468
+GI ++ F
Sbjct: 244 SGIEIDQILF 253
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 132/286 (46%), Gaps = 12/286 (4%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
++ K+L+ L VF M++ + + D + +I V G+ G + A LF MR G P+
Sbjct: 87 ENKKFLEALSVFSEMREIKCLL-DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 145
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
YN L L A+ +A+ F+ M+ + + N+VTYN ++ + ++ N
Sbjct: 146 VSYNTL----LRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVTYNSMMMIYGKTLEHEKAN 200
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
L +E+ + P+ TY+ ++ +GK G + + +++S+ + D I F +I +Y
Sbjct: 201 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTMIVAY 260
Query: 301 GKRQAFDKMEQVFKSLMHSKEKP-TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
+ K L+H ++P +P ++ I G R++ +A YVF++
Sbjct: 261 ERAGLVAHA----KRLLHELKRPDNIPRDTAIHILAGAGRIE-EATYVFRQAIDAGEVKD 315
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+E +I + S E+FD++ LG + +L AY
Sbjct: 316 ITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAY 361
>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
Length = 973
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 157/339 (46%), Gaps = 8/339 (2%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ LEV+R M + YS L+ GK+ +WL EM G +P+ Y
Sbjct: 213 EALEVYRVMMVD-GVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSY--- 268
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
T + +AK +A KM+ E CKP+++T+ +L++ A + +F ++
Sbjct: 269 -TICIRVLGQAKRFDEAYRILAKMEN-EGCKPDVITHTVLIQVLCDAGRISDAKDVFWKM 326
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK-RQA 305
+S PD TY ++D +G NG + + + + MK++ +++ + +ID+ + +
Sbjct: 327 KKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRV 386
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
F+ +E +F + P ++NS+I + KA G A +F+ M P+ T+
Sbjct: 387 FEALE-MFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVL 445
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
I YG +A + ++ + G V NA+L +G A +F MG
Sbjct: 446 FINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMG 505
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
V+PD+ TY ++ K +KA+ + K+ M +N VP+
Sbjct: 506 VSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPD 544
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 157/338 (46%), Gaps = 12/338 (3%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
EVF MQ+Q A+ G ++ + +G +G R A M+ +G + YN L+
Sbjct: 146 EVFDVMQRQ-IVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLV-- 202
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ K+ +AL ++ M ++ P++ TY++L+ A + R+V+ V L +E+
Sbjct: 203 --YFLVKSGFDREALEVYRVMM-VDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAH 259
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+ P++Y+Y + G+ E +L++M++ CKPD+IT +LI
Sbjct: 260 GVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDA 319
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECI 366
+ VF + S +KP T+ +++ +G G ++ V + AMK Y + + Y +
Sbjct: 320 KDVFWKMKKSDQKPDRVTYITLLDKFGD---NGDSQSVMEIWNAMKADGYNDNVVAYTAV 376
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I V A E+FDE+ + G + + N+++ + +A LF++ G
Sbjct: 377 IDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGP 436
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
P+ T+ L Y K+ + + M+ GIVP+
Sbjct: 437 KPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPD 474
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 144/329 (43%), Gaps = 8/329 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L ++ G + +E++ M K Y + Y+ +I + + G+ A+ +F EM+
Sbjct: 341 LLDKFGDNGDSQSVMEIWNAM-KADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQK 399
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P+ YN+LI+ L KA AL F+ M + KPN T+ + + ++
Sbjct: 400 GIVPEQYSYNSLISGFL----KADRFGDALELFKHMD-IHGPKPNGYTHVLFINYYGKSG 454
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ ++ + + PD+ N V+ K+G + + V +K+ PD IT+
Sbjct: 455 ESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYT 514
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++I K FD+ ++F ++ + P + NS+I KA +A +F ++ M
Sbjct: 515 MMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEM 574
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P+ TY ++ G V + +E+ + T N +L+ C NG +A
Sbjct: 575 NLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDA 634
Query: 415 -DLLFENSHNMGVTPDSSTYKLLYKAYTK 442
D+L+ + G PD S+Y + K
Sbjct: 635 LDMLYSMT-TKGCIPDLSSYNTVIYGLVK 662
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 168/429 (39%), Gaps = 61/429 (14%)
Query: 82 LVRVLMRSFSDKEPL----VRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQK 137
LV L++S D+E L V ++ V VR+ +L GK L + R M+
Sbjct: 201 LVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYS--VLMVAFGKRRDVETVLWLLREMEA 258
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+ Y+ I V+G+ + A + ++M N GC+PD + LI A
Sbjct: 259 H-GVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLC----DA 313
Query: 198 KALAKALGYFQKMKGMERCKP-----------------------------------NIVT 222
++ A F KMK ++ KP N+V
Sbjct: 314 GRISDAKDVFWKMKKSDQ-KPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVA 372
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y ++ A Q V + +F E+ + + P+ Y+YN ++ + K + + M
Sbjct: 373 YTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMD 432
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
+ KP+ T L I+ YGK K Q ++ + P + N+++ K+ G
Sbjct: 433 IHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLG 492
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM-------KV 395
A+ VF ++ AM +P ITY +I C S+ FDE K+ DM V
Sbjct: 493 MAKRVFHELKAMGVSPDTITYTMMIKC---CSKASK----FDEAVKIFYDMIENNCVPDV 545
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+N++++ G EA +F M + P TY L + + V LL+
Sbjct: 546 LAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEE 605
Query: 456 MEQNGIVPN 464
M + PN
Sbjct: 606 MYHSNYPPN 614
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 131/300 (43%), Gaps = 19/300 (6%)
Query: 121 KSDKWLQCLEVFRWMQ----KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGC 176
K+D++ LE+F+ M K Y + I GK G++ A+ + M++ G
Sbjct: 417 KADRFGDALELFKHMDIHGPKPNGYT-----HVLFINYYGKSGESIKAIQRYELMKSKGI 471
Query: 177 RPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
PD NA+ L K+ L A F ++K M P+ +TY ++++ C++A
Sbjct: 472 VPDVVAGNAV----LFGLAKSGRLGMAKRVFHELKAM-GVSPDTITYTMMIKCCSKASKF 526
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
D+ +F ++ E+ PD+ N ++D K G E + ++K +P T+N L
Sbjct: 527 DEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTL 586
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
+ G+ ++ + + + HS P L T+N+++ K A + MT
Sbjct: 587 LAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGC 646
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM--KVSTLNAMLEAYCMNGLPTEA 414
P +Y +I YG R E F ++ K + +TL +L ++ GL EA
Sbjct: 647 IPDLSSYNTVI--YGLVKE-ERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEA 703
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 86/179 (48%)
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN ++ +I E + + MK C PD T+NLL+D+ GK ++M +V + +
Sbjct: 793 YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 852
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
+ T T+N++I K+R +A ++ + + ++P+ TY ++ +
Sbjct: 853 RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIE 912
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
A +F+E+ + G + N +L + + G + LF++ + G+ PD +Y ++
Sbjct: 913 DAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTII 971
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 78/181 (43%)
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
YN L+ +D LF E+ E PD +TYN ++DA GK+ I+EM V M
Sbjct: 793 YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 852
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
+ +T+N +I K + ++ ++ +LM PT T+ ++ KA
Sbjct: 853 RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIE 912
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
AE +F +M + Y ++ + N + +F ++ G + + + ++
Sbjct: 913 DAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 972
Query: 403 E 403
+
Sbjct: 973 D 973
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 44/191 (23%)
Query: 145 TGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKAL 204
TG+Y+ LI + + +A LF+EM+ GC PD YN L+ A K+ + + L
Sbjct: 790 TGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDA----MGKSMRIEEML 845
Query: 205 GYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
++M KG E VTYN ++ ++R ++Q L+ L +P TY ++
Sbjct: 846 KVQEEMHRKGYES---TYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLL 902
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCK----------------------------------- 287
D K G I++ E++ + M CK
Sbjct: 903 DGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGIN 962
Query: 288 PDIITFNLLID 298
PDI ++ ++ID
Sbjct: 963 PDIKSYTIIID 973
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
LL + +GKS + + L+V M + + Y + Y+ +I+ + K + A+ L+ + +
Sbjct: 830 LLLDAMGKSMRIEEMLKVQEEMHR-KGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMS 888
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME-RCKPNIVTYNILLRACAQ 232
G P P Y L+ L KA + A F +M +E CK N YNILL
Sbjct: 889 QGFSPTPCTYGPLLDGLL----KAGRIEDAENLFNEM--LEYGCKANCTIYNILLNGHRI 942
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMD 263
A N ++V LF+++ + + PDI +Y ++D
Sbjct: 943 AGNTEKVCHLFQDMVDQGINPDIKSYTIIID 973
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 97/232 (41%), Gaps = 11/232 (4%)
Query: 142 IADTGI------YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRD 195
IA +GI LI + K+ + A L + ++ G +YN+LI +
Sbjct: 746 IASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLV---- 801
Query: 196 KAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
+ A G F +MK + C P+ TYN+LL A ++ ++++ + +E+H
Sbjct: 802 DENLIDIAEGLFAEMKEL-GCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTY 860
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
TYN ++ K+ +++ + + S P T+ L+D K + E +F
Sbjct: 861 VTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNE 920
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
++ K +N ++ + A K ++FQ M P +Y II
Sbjct: 921 MLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 972
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 158/357 (44%), Gaps = 23/357 (6%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L + K + ++F+ M K+ D +Y+ LI K G A F EM GC P
Sbjct: 232 LCNASKVEKAFQLFQEM-KRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAP 290
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
+ Y ALI A+L +R +KA +M + C PNIVTY L+ +A +++
Sbjct: 291 NVVTYTALIHAYLKSRKVSKA-----NEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEK 345
Query: 239 VNALFK------------ELHESIL-----APDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
+ ++K ++H ++ P+++TY ++D K +KE +L M
Sbjct: 346 ASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSM 405
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
C+P+ + ++ LID K D+ ++VF +++ P + T++S+I K +
Sbjct: 406 SVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRL 465
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
A V KM P+ + Y +I A ++ + + G + V T AM
Sbjct: 466 DLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAM 525
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
++ + +G + L + + G P+ TY++L + + KLL+ M+Q
Sbjct: 526 IDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQ 582
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 152/358 (42%), Gaps = 23/358 (6%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
K+ + V R M + +I DT YSK+I + + A LF EM+ +G PD VY
Sbjct: 202 KFEKAYNVIREMM-SKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVY 260
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
LI + KA + +A +F +M+ + C PN+VTY L+ A ++R V + N ++
Sbjct: 261 TTLIDSFC----KAGFIEQARNWFDEME-RDGCAPNVVTYTALIHAYLKSRKVSKANEVY 315
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC----------------- 286
+ + P+I TY ++D K G I++ + MK
Sbjct: 316 EMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASN 375
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
+P++ T+ L+D K + + KS+ +P ++++I KA +A+
Sbjct: 376 EPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQE 435
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
VF M Y P+ TY +I + A ++ ++ + V M++ C
Sbjct: 436 VFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLC 495
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G EA L G P+ TY + + K+ E +LL++M G PN
Sbjct: 496 KVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPN 553
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 156/381 (40%), Gaps = 56/381 (14%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK---- 202
I++ L+ + G A L +M GC+P VYN LI + + K +
Sbjct: 114 IFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEK 173
Query: 203 -------------------------ALGYFQKMKGMER------CKPNIVTYNILLRACA 231
+G F+K + R P+ TY+ ++
Sbjct: 174 AYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLC 233
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
A V++ LF+E+ + +APD+Y Y ++D++ K G I++ + M+ + C P+++
Sbjct: 234 NASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVV 293
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
T+ LI +Y K + K +V++ ++ P + T+ ++I KA KA +++ M
Sbjct: 294 TYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIM 353
Query: 352 ---------TAMKY--------TPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKD 392
M + P+ TY ++ G C V AR++ +S G +
Sbjct: 354 KKENVEIPDVDMHFRVVDGASNEPNVFTYGALVD--GLCKAYQVKEARDLLKSMSVEGCE 411
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
+A+++ C G EA +F G P+ TY L K +L K+
Sbjct: 412 PNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKV 471
Query: 453 LKRMEQNGIVPNKRFFLEALE 473
L +M +N PN + E ++
Sbjct: 472 LSKMLENSCAPNVVIYTEMID 492
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 160/349 (45%), Gaps = 48/349 (13%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + L K+ K + ++++ M+K+ I D ++ +++
Sbjct: 333 LIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVV---------------------D 371
Query: 175 GCRPDPSV--YNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
G +P+V Y AL+ KA + +A + M +E C+PN V Y+ L+ C +
Sbjct: 372 GASNEPNVFTYGALVDGLC----KAYQVKEARDLLKSMS-VEGCEPNHVVYDALIDGCCK 426
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
A +D+ +F + E P++YTY+ ++D K+ + VLS+M N C P+++
Sbjct: 427 AGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVI 486
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEK---PTLPTFNSMIINYGKARLQGKAEYVFQ 349
+ +ID K K ++ +K ++ +EK P + T+ +MI +GK+ K + Q
Sbjct: 487 YTEMIDGLCK---VGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQ 543
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY--CM 407
+M++ P+F+TY +I N + + DE KL ++MK + + Y +
Sbjct: 544 QMSSKGCAPNFVTYRVLI-------NHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVI 596
Query: 408 NGLPTE----ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
G E L FE S N V P + Y++L + KA E+ +L
Sbjct: 597 EGFNREFIASLYLSFEISENDSV-PVAPVYRVLIDNFIKAGRLEIALEL 644
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/440 (20%), Positives = 162/440 (36%), Gaps = 105/440 (23%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS---- 174
L KS KW + L + ++ ++ DT +Y+K+I+ + + AM + MR S
Sbjct: 20 LCKSGKWREALSLL----EKEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLP 75
Query: 175 -------------------------------GCRPDPSVYNALITAHLHTRDKAKALAKA 203
GC P P ++N+L+ A+ + D A A
Sbjct: 76 NVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYA---- 131
Query: 204 LGYFQKMKGMER--CKPNIVTYNILLRACAQARN----------------------VDQV 239
++ +K M + C+P V YNIL+ + +++V
Sbjct: 132 ---YKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKV 188
Query: 240 NA------------------LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
N + +E+ PD TY+ V+ +++ + M
Sbjct: 189 NISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEM 248
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
K N PD+ + LIDS+ K ++ F + P + T+ ++I Y K+R
Sbjct: 249 KRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKV 308
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM-------- 393
KA V++ M + TP+ +TY +I + +A +I+ + K ++
Sbjct: 309 SKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFR 368
Query: 394 ---------KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
V T A+++ C EA L ++ G P+ Y L KA
Sbjct: 369 VVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAG 428
Query: 445 MKELVQKLLKRMEQNGIVPN 464
+ Q++ M + G PN
Sbjct: 429 KLDEAQEVFTTMLECGYDPN 448
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 110/245 (44%), Gaps = 19/245 (7%)
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
L + PD Y ++ + + +E L+RM+++ C P+++T+ +L+ ++
Sbjct: 33 LEKEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEK 92
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+ +++ ++ P+ FNS++ Y ++ A + +KM P ++ Y
Sbjct: 93 LGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNI 152
Query: 366 IITMYGYCDNVSRAREIFDELSK-----LGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
+I G C + +++ D K L + ++ +N + C+ G+ FE
Sbjct: 153 LIG--GICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGK-----FEK 205
Query: 421 SHNM-------GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
++N+ G PD+STY + A+ E +L + M++NGI P+ + ++
Sbjct: 206 AYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLID 265
Query: 474 TFSSS 478
+F +
Sbjct: 266 SFCKA 270
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 143/311 (45%), Gaps = 9/311 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + G+ A+ LF +M+ GC PD Y L+ A + +AL +F
Sbjct: 263 YTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALK----FF 318
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
++M G+E PN+ TY +L+ + +D+ + + E L + +N ++D Y
Sbjct: 319 EEMVENGIE---PNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGY 375
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K GM+++ VL MK N+ P+ T+N LI + ++++ D+ + + +K P L
Sbjct: 376 CKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNL 435
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+N++I KAR+ A + M + P T+ I V +A ++F+
Sbjct: 436 VTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFES 495
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
L + + A+++ YC ++A LLF+ G P+S T+ +L K
Sbjct: 496 LKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGK 555
Query: 446 KELVQKLLKRM 456
E L+ M
Sbjct: 556 VEDAMSLVDVM 566
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 147/354 (41%), Gaps = 15/354 (4%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
F ++GK D+ ++ L ++ ++ ++ LI K+G A+ + M+ +
Sbjct: 340 FCKVGKMDEGMEMLSTML----EKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNK 395
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
P+ YN LI + K++ +A+ KM + PN+VTYN L+ +AR
Sbjct: 396 VCPNSRTYNELICGFC----RKKSMDRAMALLNKMYE-NKLSPNLVTYNTLIHGLCKARV 450
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
VD L + + PD T+ +D K G +++ V +K + + +
Sbjct: 451 VDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTA 510
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM- 354
LID Y K + F +FK ++ P TFN ++ R +GK E + M
Sbjct: 511 LIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLL---DGLRKEGKVEDAMSLVDVMG 567
Query: 355 --KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
P+ TY +I + RA D++ G V T A ++AYC G
Sbjct: 568 KFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLL 627
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
EA+ + G+ DS Y +L AY + +L RM G P+++
Sbjct: 628 EAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQ 681
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 148/355 (41%), Gaps = 20/355 (5%)
Query: 126 LQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
L L F+W+ Q +I Y L+ ++ + G R A +RNS + S + A
Sbjct: 84 LTALNFFKWIHYQHGFIHTVHSYQPLLFILVRNGFLRAA----ENVRNSMIKSCVSSHEA 139
Query: 186 -----LITAH-----LHTRDKAKALAKALGYFQKMKGM------ERCKPNIVTYNILLRA 229
L+T H + + ++ + G ++ + + +PN++++N ++ A
Sbjct: 140 RFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNA 199
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
+ NV A F L + D +TY ++ Y K + + V M C +
Sbjct: 200 HCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRN 259
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
+++ LI + + D+ ++F + P +PT+ ++ + + + +A F+
Sbjct: 260 EVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFE 319
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
+M P+ TY +I + + E+ + + G V NA+++ YC G
Sbjct: 320 EMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRG 379
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ +A + ++ V P+S TY L + + + LL +M +N + PN
Sbjct: 380 MMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPN 434
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 137/389 (35%), Gaps = 71/389 (18%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRD------------ 195
Y++L V+ + G LF +M N G P+ +N ++ AH +
Sbjct: 158 YNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLM 217
Query: 196 -------------------KAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
K L A F+ M E C N V+Y L+ + +
Sbjct: 218 KFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMP-QEGCLRNEVSYTNLIHGFCEVGKI 276
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF--- 293
D+ LF ++ E PD+ TY ++ A+ + G E M N +P++ T+
Sbjct: 277 DEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVL 336
Query: 294 --------------------------------NLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
N LID Y KR + V S+ +K
Sbjct: 337 IDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKV 396
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRA 379
P T+N +I + + + +A + KM K +P+ +TY +I +G C V A
Sbjct: 397 CPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLI--HGLCKARVVDSA 454
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+ + K G T A ++ C G +A +FE+ + Y L
Sbjct: 455 WRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDG 514
Query: 440 YTKANMKELVQKLLKRMEQNGIVPNKRFF 468
Y KA L KRM G PN F
Sbjct: 515 YCKAEKFSDAHLLFKRMLFEGCFPNSITF 543
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 152/371 (40%), Gaps = 38/371 (10%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L K K Q +VF + K++ A+ +Y+ LI K + A LF M GC P
Sbjct: 480 LCKMGKVEQAHQVFESL-KEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFP 538
Query: 179 DPSVYNALITAHLHTRDK---AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
+ +N L+ L K A +L +G F KP + TY IL+ + +
Sbjct: 539 NSITFNVLLDG-LRKEGKVEDAMSLVDVMGKFDA-------KPTVHTYTILIEEILRESD 590
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
D+ N ++ S P++ TY + AY + G + E E ++ ++K D +++
Sbjct: 591 FDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDV 650
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF---------------------NSMIIN 334
L+++YG D V + + +P+ T+ NS I+
Sbjct: 651 LVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNIS 710
Query: 335 YGKARLQGKAEY-----VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
A + A++ +F+KM P+ TY +I +++S A +F+ + +
Sbjct: 711 VDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKES 770
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
G + N++L + C G+ EA L ++ +YKLL + +E
Sbjct: 771 GISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKA 830
Query: 450 QKLLKRMEQNG 460
+++ + + G
Sbjct: 831 EEIFRSLLSCG 841
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 142/376 (37%), Gaps = 60/376 (15%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA--------------HLHT 193
Y++LI +K AM L ++M + P+ YN LI HL
Sbjct: 403 YNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMI 462
Query: 194 RD-----------------KAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
+D K + +A F+ +K + + N Y L+ +A
Sbjct: 463 KDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKE-KHAEANEFLYTALIDGYCKAEKF 521
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
+ LFK + P+ T+N ++D K G +++ S++ M KP + T+ +L
Sbjct: 522 SDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTIL 581
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK-ARLQGKAEYVFQKMTAMK 355
I+ + FD+ ++ S +P + T+ + I Y + RL E V +
Sbjct: 582 IEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGI 641
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML-----EAYCMNGL 410
SFI Y+ ++ YG + A + + G + T + +L E Y G+
Sbjct: 642 LLDSFI-YDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGM 700
Query: 411 PTEAD---------------------LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
+ + +LFE G P+ +TY L K K L
Sbjct: 701 GLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLA 760
Query: 450 QKLLKRMEQNGIVPNK 465
+L M+++GI P++
Sbjct: 761 FRLFNHMKESGISPSE 776
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 105/252 (41%), Gaps = 17/252 (6%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D+ IY L+ G GQ A + M ++GC P Y+ L+ + +
Sbjct: 637 KEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEK-- 694
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
Y ++ G++ NI N + A + + + LF+++ E P++
Sbjct: 695 ---------YNKEGMGLDLNSTNISVDNANIWKIA---DFEIITMLFEKMVEQGCVPNVN 742
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TY+ ++ K + + + MK + P N L+ S K ++ ++ S+
Sbjct: 743 TYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSM 802
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI---ITMYGYC 373
M L ++ ++ + Q KAE +F+ + + Y + ++ + + GY
Sbjct: 803 MEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYV 862
Query: 374 DNVSRAREIFDE 385
D S+ R+I ++
Sbjct: 863 DECSQLRDIMEK 874
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 159/334 (47%), Gaps = 10/334 (2%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
R + +T Y+ LI+ + K+ Q A L + + G PD +N+LI T +
Sbjct: 380 RDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRL 439
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYT 257
A+ F++MK + C P+ TYN+L+ + C++ R +++ +L KE+ S + ++ T
Sbjct: 440 AME----LFEEMK-TKGCHPDEFTYNMLIDSLCSRGR-LEEALSLLKEMESSGCSRNVVT 493
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN ++D + KN I+E E + M+ +++T+N LID K + ++ Q+ ++
Sbjct: 494 YNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQML 553
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
KP T+NS++ + +A KA + Q MT+ P +TY +I V
Sbjct: 554 MEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVE 613
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
A + + G + T N +++A +EA LF G PD+ TYK+++
Sbjct: 614 LASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVF 673
Query: 438 KAYTKAN--MKELVQKLLKRMEQNGIVPNKRFFL 469
+ + E V L++ M G +P+ FL
Sbjct: 674 RGLCSGGGPIGEAVDFLVE-MTDKGFLPDFSSFL 706
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 145/321 (45%), Gaps = 9/321 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++ L+ + + G + A+ + M G PD YN+LI K + +A
Sbjct: 315 DRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLC----KLGEVEEA 370
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ +M + PN VTYN L+ + V++ L + L + PD+ T+N ++
Sbjct: 371 VEILNQMI-LRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQ 429
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ + MK+ C PD T+N+LIDS R ++ + K + S
Sbjct: 430 GLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSR 489
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRARE 381
+ T+N++I + K + +AE +F +M + + +TY +I G C N V A +
Sbjct: 490 NVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLID--GLCKNRRVEEAAQ 547
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ D++ G T N++L +C G +A + + + G PDS TY L +
Sbjct: 548 LMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLS 607
Query: 442 KANMKELVQKLLKRMEQNGIV 462
KA EL +LL+ ++ G+V
Sbjct: 608 KAGRVELASRLLRTVQLKGMV 628
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 155/398 (38%), Gaps = 66/398 (16%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L++ W KQ ++ + IY +++ +GK G + EM+++GC + LI
Sbjct: 89 LDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIE 148
Query: 189 --AHLHTRDKAKA--------------------LAKALGYFQKMKGME---------RCK 217
A D+A A L L K+K +E K
Sbjct: 149 SYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIK 208
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY------------------- 258
P++ T+NIL++A +A + + +E+ L+PD T+
Sbjct: 209 PDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRI 268
Query: 259 ----------------NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
N ++ Y K G I+E+ S + M + +PD TFN L++ +
Sbjct: 269 REQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCR 328
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
++ ++ P + T+NS+I K +A + +M ++P+ +T
Sbjct: 329 IGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVT 388
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y +I+ + V A E+ L+ G V T N++++ C+ A LFE
Sbjct: 389 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMK 448
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
G PD TY +L + E LLK ME +G
Sbjct: 449 TKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSG 486
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 140/339 (41%), Gaps = 5/339 (1%)
Query: 126 LQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
L+ +E+ R D ++ LI + + Q R A+ + EM + G PD +
Sbjct: 192 LKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTT 251
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
L+ + + AL ++ C + VT N+L+ + +++V + E
Sbjct: 252 LMQGFIEEGNMNGALR-----IREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDE 306
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ PD +T+N +++ + G +K +L M PDI T+N LI K
Sbjct: 307 MSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGE 366
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
++ ++ ++ P T+N++I K +A + + +T+ P T+
Sbjct: 367 VEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 426
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+I +N A E+F+E+ G T N ++++ C G EA L + + G
Sbjct: 427 LIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSG 486
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ + TY L + K E +++ ME GI N
Sbjct: 487 CSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRN 525
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 94/250 (37%), Gaps = 36/250 (14%)
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD--- 307
P Y V+ GK+G M VL MK C+ TF +LI+SY K + FD
Sbjct: 101 FVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAV 160
Query: 308 --------------------------------KMEQVFKSLMHSKE-KPTLPTFNSMIIN 334
K+ ++ S M S+ KP + TFN +I
Sbjct: 161 AVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKA 220
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
+A A + ++M + +P T+ ++ + N++ A I +++ G
Sbjct: 221 LCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSS 280
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
T+N ++ YC G E + N G PD T+ L + + ++L
Sbjct: 281 NVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILD 340
Query: 455 RMEQNGIVPN 464
M Q G P+
Sbjct: 341 VMLQEGFDPD 350
>gi|218199303|gb|EEC81730.1| hypothetical protein OsI_25362 [Oryza sativa Indica Group]
Length = 583
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 162/377 (42%), Gaps = 41/377 (10%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I G G + A+ L +M +G PD +N +++A ++ A+ +KA+ YF
Sbjct: 84 YNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSA---LKNGAQ-YSKAISYF 139
Query: 208 QKMKGME------------------------------------RCKPNIVTYNILLRACA 231
+ MKG +C P++VTY ++ +
Sbjct: 140 EIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYC 199
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
V+ A+F + + P+I YN ++ AY GM +E ++ + +K N +PDI+
Sbjct: 200 IYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIV 259
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
++ L+++YG+ +K +VF + + KP ++N++I YG A + +A + +M
Sbjct: 260 SYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEM 319
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P ++ ++ G C ++R I + G D+ N+ +++Y G
Sbjct: 320 EKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDY 379
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
+A L+ + V PD+ TY +L +K + + M + + K FL
Sbjct: 380 EKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKE-FLWT 438
Query: 472 LETFSSSLAGSQSGSAK 488
+ SL Q +K
Sbjct: 439 IRWLEESLGPVQRDGSK 455
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 144/334 (43%), Gaps = 11/334 (3%)
Query: 135 MQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR 194
M+ Q Y A IY +I + + Q A LF EM+ C+PD +YN+LI H H+R
Sbjct: 1 MKNQDNYCARNDIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLI--HAHSR 58
Query: 195 DKAKALAKALGYFQKMKGMERCK--PNIVTYNILLRACAQARNVDQVNALFKELHESILA 252
A M+ M R P TYN ++ AC A N + L K++ E+ +
Sbjct: 59 AGQWRWA-----INIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVG 113
Query: 253 PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
PD+ T+N V+ A + S MK D T N++I K + ++
Sbjct: 114 PDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIEL 173
Query: 313 FKSLMHSKEK--PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
F S+ + K P + T+ S++ +Y + +F M A P+ + Y ++ Y
Sbjct: 174 FNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAY 233
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
A IF+ + K G + + ++L AY + P +A +F P+
Sbjct: 234 ASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNK 293
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+Y L AY A M + LL ME++GI P+
Sbjct: 294 VSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPD 327
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 126/279 (45%), Gaps = 3/279 (1%)
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+A G F +M+ RCKP+ YN L+ A ++A + +++ + + P TYN V
Sbjct: 29 QARGLFFEMQEW-RCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNV 87
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
++A G G K+ + +M N PD++T N+++ + + K F+ + +
Sbjct: 88 INACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANV 147
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTA--MKYTPSFITYECIITMYGYCDNVSRA 379
T N +I K G+A +F M K P +TY I+ Y V
Sbjct: 148 TSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENC 207
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+ IFD + G + N++L AY G+ EA +F G+ PD +Y L A
Sbjct: 208 KAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNA 267
Query: 440 YTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
Y ++ E +++ +M++N PNK + ++ + S+
Sbjct: 268 YGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSA 306
>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
Length = 695
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 153/344 (44%), Gaps = 42/344 (12%)
Query: 171 MRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRAC 230
M +G P+ +YN LI+ KA LA+A Y ++M + C PN+V+YNI++
Sbjct: 1 MLEAGLFPNAILYNNLISCLC----KAGMLAEAESYLKRMP--QHCAPNVVSYNIIIDGY 54
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
+ARN+++ A +E+ E P + Y+ ++ ++ K G + + V + M + C+PDI
Sbjct: 55 CKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDI 114
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
+ FN+L+ + + + ++F+S+ KP + T+N+MI K + +A ++ ++
Sbjct: 115 VNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLER 174
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS----------------KLGKDMK 394
M +P+F+TY +I + +A E+F++++ KL + K
Sbjct: 175 MKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGK 234
Query: 395 VSTLNAMLEAYC--------------------MNGLPTEADLLFENSHNMGVTPDSSTYK 434
+ + + C M+G EA L + PD Y
Sbjct: 235 LVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYS 294
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+L KA +++ + M GI P + LE S+
Sbjct: 295 ILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLST 338
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 157/371 (42%), Gaps = 45/371 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS ++ K G AM +F+EM GC PD +N L++ +A+ + +A F
Sbjct: 82 YSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW----RARKIHEARELF 137
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD---- 263
+ M CKP++VTYN ++ + + +D+ L + + + ++P TY ++D
Sbjct: 138 RSMNS-RGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCK 196
Query: 264 --------------AYGKNGMIKEMESVL-------------SRMKSNQCKPDII----T 292
A G + SVL SR+ S+ C+ ++ T
Sbjct: 197 FTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNT 256
Query: 293 FNLLIDSYGKRQAFD-KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
++L++ K + + ++ +M K P ++ +I KAR G+A+ +FQ+M
Sbjct: 257 YSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEM 316
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+P+ +TY ++ + A E+ + G+ + N M+ +C NG
Sbjct: 317 RGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDT 376
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME--QNGIVPNKRFFL 469
EA LF++ G+ ++ TY + + K L KRM+ +N VP F
Sbjct: 377 NEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMF- 435
Query: 470 EALETFSSSLA 480
E SSL
Sbjct: 436 -TYEILISSLC 445
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 142/356 (39%), Gaps = 47/356 (13%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I K A+ EM G P P Y++++ + T + ++KA+ F
Sbjct: 47 YNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGN----VSKAMDVF 102
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M + C+P+IV +N+LL +AR + + LF+ ++ PD+ TYN ++ K
Sbjct: 103 AEMPA-KGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCK 161
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ E +L RMK P +T+ LID K F +++Q ++ E P T
Sbjct: 162 WKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCK---FTRLQQAYEVFEKMAEGPCACT 218
Query: 328 -------FNSM-----------------------------IINYGKARLQG---KAEYVF 348
FN + ++ G +++ G +A +
Sbjct: 219 EPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLV 278
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
+M K P F Y +I A+E+F E+ G V T N +LE
Sbjct: 279 TEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLST 338
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+A L + G PD+ +Y L+ + + L + M ++GIV N
Sbjct: 339 AKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLN 394
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 158/362 (43%), Gaps = 19/362 (5%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGK-KGQTRLAMWLFSEMR 172
+LF +L ++ K ++ V+ M ++ + D YS ++ + K G A L +EM
Sbjct: 224 VLFNKLQRAGKLVEASRVYSDMCRKNVCMTDN-TYSLVVLGLSKMDGGNVEAAKLVTEMM 282
Query: 173 NSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRAC-A 231
PD Y+ LI KA+ +A FQ+M+G P +VTYN LL +
Sbjct: 283 GKKIAPDFYAYSILINGLC----KARRPGEAKEMFQEMRG-RGISPTVVTYNTLLEGLLS 337
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
A+ D + + L + L PD +YN ++ + NG E + M + +
Sbjct: 338 TAKLQDAMELTYFMLDQGRL-PDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTW 396
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK----PTLPTFNSMIINYGKARLQGKAEYV 347
T+N +I + K +A+ +FK + K P + T+ +I + K + E
Sbjct: 397 TYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKT---DQVEEA 453
Query: 348 FQKMTAMK---YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
F+ ++AM+ + PS +E +++ + A E++ E+S++ V + N +L+
Sbjct: 454 FKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDG 513
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G EA + + G+ PD TY L + +KL++ + ++G P
Sbjct: 514 ILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPE 573
Query: 465 KR 466
+
Sbjct: 574 NQ 575
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 152/385 (39%), Gaps = 78/385 (20%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS LI + K + A +F EMR G P YN L+ L T A+ L YF
Sbjct: 293 YSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAME--LTYF 350
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+G P+ +YN+++R + ++ LF+++ + + + +TYN ++ + K
Sbjct: 351 MLDQGR---LPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIK 407
Query: 268 NGMIKEMESVLSRMKSNQCK----PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK- 322
+ + RM+S + P++ T+ +LI S K D++E+ FK L ++K
Sbjct: 408 DEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKT---DQVEEAFKLLSAMRDKG 464
Query: 323 --PTLPTFNSMIINYGKA-------------------RLQG----------------KAE 345
P+L + ++ +A +L G +A+
Sbjct: 465 FVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAK 524
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
++MT P TY+ ++ + +AR++ +EL + GK + L +L A
Sbjct: 525 DFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLLGAL 584
Query: 406 CMNG-----------LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
C G LP+ + HN VT KL Y L
Sbjct: 585 CAQGDFQGAYEFYCWLPSVGVEVTLGMHNTLVTSCCLARKLDY---------------LD 629
Query: 455 RMEQNGIVPNKRFFLEALETFSSSL 479
+EQ VP+ +E +E F + L
Sbjct: 630 MIEQREGVPD--VIVERIEKFRAEL 652
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 178/408 (43%), Gaps = 30/408 (7%)
Query: 74 SEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFR 133
+E+L S E++ + R++++ + LNK V V C +GK +K V R
Sbjct: 59 TEDLPSMEVIGLAERAYNEMLEMGVVLNK-VNVCNFTRCLCC---IGKFEKAYN---VIR 111
Query: 134 WMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT 193
M + +I D+ YSK+I + + A LF EM+ +G PD Y L+
Sbjct: 112 EMM-SKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFC-- 168
Query: 194 RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP 253
K + +A +F +M+ + C PN+VTY L+ A + R + + N +F+ + + P
Sbjct: 169 --KVGLIEQARNWFDEMQ-QDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVP 225
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC-----------------KPDIITFNLL 296
+I TY ++D + K G ++ + +RMK+++ +P+++T+ L
Sbjct: 226 NIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGAL 285
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
+D K + + +++ +P ++++I + K +A+ VF KM
Sbjct: 286 VDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGC 345
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
+P+ TY +I + A ++ ++ + V M++ C G EA
Sbjct: 346 SPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYR 405
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L G P+ TY + + KA + +LL+ M G PN
Sbjct: 406 LMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPN 453
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 163/381 (42%), Gaps = 23/381 (6%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L + K + ++F+ M K+ D Y+ L+ K G A F EM+ GC P
Sbjct: 132 LCNASKVEKAFQLFQEM-KRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAP 190
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL----------R 228
+ Y ALI A+L TR L++A F+ M C PNIVTY L+ +
Sbjct: 191 NVVTYTALIHAYLKTR----KLSRANEIFEMMLS-NGCVPNIVTYTALIDGHCKAGETEK 245
Query: 229 AC---AQARN----VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
AC A+ +N + V+ F+ + + P++ TY ++D K +KE +L M
Sbjct: 246 ACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETM 305
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
C+P+ I ++ LID + K D+ ++VF ++ P + T++S+I K +
Sbjct: 306 SLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRL 365
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
A V KM P+ + Y ++ A + + + G V T AM
Sbjct: 366 DLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAM 425
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
++ + G L + + G P+ TY++L A + + KLL+ M+Q
Sbjct: 426 IDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYW 485
Query: 462 VPNKRFFLEALETFSSSLAGS 482
+ + + +E FS S
Sbjct: 486 PKHIGMYRKVIEGFSHEFVAS 506
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 160/380 (42%), Gaps = 53/380 (13%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRD----KAKALAK 202
I++ L+ + G A L +M G +P VYN LI T D + LA+
Sbjct: 13 IFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVIGLAE 72
Query: 203 --------------------------ALGYFQKMKGMER------CKPNIVTYNILLRAC 230
+G F+K + R P+ TY+ ++
Sbjct: 73 RAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYL 132
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
A V++ LF+E+ + + PD+YTY ++D + K G+I++ + M+ + C P++
Sbjct: 133 CNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNV 192
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
+T+ LI +Y K + + ++F+ ++ + P + T+ ++I + KA KA ++ +
Sbjct: 193 VTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYAR 252
Query: 351 MTAMKYT-----------------PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
M K P+ +TY ++ V AR++ + +S G +
Sbjct: 253 MKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEP 312
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
+A+++ +C G EA +F G +P+ TY L K +L K+L
Sbjct: 313 NQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVL 372
Query: 454 KRMEQNGIVPNKRFFLEALE 473
+M +N PN + E ++
Sbjct: 373 TKMLENSCAPNVVIYTEMVD 392
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 155/344 (45%), Gaps = 33/344 (9%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR-PDPSVYNALIT 188
E+F M + + Y+ LI K G+T A +++ M+N PD +Y ++
Sbjct: 213 EIFEMMLSNGC-VPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVD 271
Query: 189 AHLHTRDKAK--ALAKALGYFQKMK---------GMERCKPNIVTYNILLRACAQARNVD 237
+ L + AL L K+K +E C+PN + Y+ L+ + +D
Sbjct: 272 SELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLD 331
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ +F ++ +P++YTY+ ++D K+ + VL++M N C P+++ + ++
Sbjct: 332 EAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMV 391
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEK---PTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
D K K ++ ++ ++ +EK P + T+ +MI +GKA + + Q MT+
Sbjct: 392 DGLCK---VGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSK 448
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY--CMNGLPT 412
P+FITY +I N A + D+ KL ++MK + + Y + G
Sbjct: 449 GCAPNFITYRVLI-------NHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSH 501
Query: 413 E----ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
E LL E S + G P YKLL + KA E+ +L
Sbjct: 502 EFVASLGLLAELSED-GSVPILPVYKLLIDNFIKAGRLEMALEL 544
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 129/307 (42%), Gaps = 39/307 (12%)
Query: 171 MRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERC--KPNIVTYNILLR 228
M GC P P ++N+L+ A+ + D A ++ +K M C +P V YNIL+
Sbjct: 2 MITEGCYPSPMIFNSLVHAYCRSGDYFYA-------YKLLKKMVICGYQPGYVVYNILIG 54
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
++ + + LA Y N M+ EM VL+++
Sbjct: 55 GICSTEDLPSMEVIG-------LAERAY-----------NEML-EMGVVLNKV------- 88
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
++ F + GK F+K V + +M P T++ +I A KA +F
Sbjct: 89 NVCNFTRCLCCIGK---FEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLF 145
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
Q+M TP TY ++ + + +AR FDE+ + G V T A++ AY
Sbjct: 146 QEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKT 205
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI-VPNKRF 467
+ A+ +FE + G P+ TY L + KA E ++ RM+ + + +P+
Sbjct: 206 RKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDI 265
Query: 468 FLEALET 474
+ +++
Sbjct: 266 YFRIVDS 272
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 68/161 (42%), Gaps = 10/161 (6%)
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--------D 374
P+ FNS++ Y ++ A + +KM Y P ++ Y +I G C +
Sbjct: 9 PSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIG--GICSTEDLPSME 66
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
+ A ++E+ ++G + + C G +A + + G PDSSTY
Sbjct: 67 VIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYS 126
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ A+ E +L + M++NGI P+ + L+ F
Sbjct: 127 KVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRF 167
>gi|410110149|gb|AFV61154.1| pentatricopeptide repeat-containing protein 123, partial
[Xeroaloysia ovatifolia]
Length = 431
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 141/308 (45%), Gaps = 7/308 (2%)
Query: 134 WMQK--QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
W+QK Q D +YS LI + K A+ +FS ++ SG PD YNA+I
Sbjct: 34 WLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVF- 92
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KAK +A +M+ PN +Y LL + + + ++F E+ E
Sbjct: 93 ---GKAKLFREARSLISEMR-TAGVMPNTASYTTLLTMYVENKKFLEALSVFSEMREIKC 148
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
D+ T N ++D YG+ GM KE + + M+ +P+++++N L+ YG + F +
Sbjct: 149 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 208
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+F+ + + T+NSM++ YGK KA + Q+M P+ ITY II+++G
Sbjct: 209 LFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWG 268
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ RA +F +L G ++ M+ AY GL A L + P +
Sbjct: 269 KAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYEKAGLVAHAKRLLHELKSPDNIPRDT 328
Query: 432 TYKLLYKA 439
+L A
Sbjct: 329 AIHILAGA 336
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 152/327 (46%), Gaps = 5/327 (1%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
++R D YS LI GK+G A+ +M D +Y+ LI D
Sbjct: 4 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 63
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+KA++ F ++K P++V YN ++ +A+ + +L E+ + + P+
Sbjct: 64 SKAIS----IFSRLK-RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTA 118
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+Y ++ Y +N E SV S M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 119 SYTTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 178
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P + ++N+++ YG A L G+A ++F+ M + +TY ++ +YG
Sbjct: 179 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEH 238
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A + E+ G + T + ++ + G A +LF+ + GV D Y+ +
Sbjct: 239 EKANNLIQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTM 298
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVP 463
AY KA + ++LL ++ +P
Sbjct: 299 IVAYEKAGLVAHAKRLLHELKSPDNIP 325
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 136/293 (46%), Gaps = 5/293 (1%)
Query: 169 SEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLR 228
EMR PD Y+ LIT H K AL + QKM+ +R ++V Y+ L+
Sbjct: 1 DEMRERALSPDRYTYSTLIT-HF---GKEGLFDAALSWLQKME-QDRVPGDLVLYSNLIE 55
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
+ + + ++F L S PD+ YN +++ +GK + +E S++S M++ P
Sbjct: 56 LSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMP 115
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
+ ++ L+ Y + + F + VF + K L T N MI YG+ + +A+ +F
Sbjct: 116 NTASYTTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 175
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
M M P+ ++Y ++ +YG + A +F + + V T N+M+ Y
Sbjct: 176 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKT 235
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+A+ L + N G+ P+S TY + + KA + L +++ +G+
Sbjct: 236 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGV 288
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 110/220 (50%)
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
E+ E L+PD YTY+ ++ +GK G+ S L +M+ ++ D++ ++ LI+ K
Sbjct: 2 EMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLC 61
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
+ K +F L S P L +N+MI +GKA+L +A + +M P+ +Y
Sbjct: 62 DYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYT 121
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
++TMY A +F E+ ++ + ++T N M++ Y G+ EAD LF M
Sbjct: 122 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 181
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G+ P+ +Y L + Y A + L + M++ IV N
Sbjct: 182 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQN 221
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 150/360 (41%), Gaps = 42/360 (11%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L SEMR +G P+ + Y L+T ++
Sbjct: 74 KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTTLLTMYVEN--- 130
Query: 197 AKALAKALGYFQKMK--------------------------------GMER--CKPNIVT 222
K +AL F +M+ GM + +PN+V+
Sbjct: 131 -KKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 189
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
YN LLR A + LF+ + + ++ TYN +M YGK ++ +++ M+
Sbjct: 190 YNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQ 249
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
+ +P+ IT++ +I +GK D+ +F+ L S + + +MI+ Y KA L
Sbjct: 250 NRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYEKAGLVA 309
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
A+ + ++ +P I + I + + A +F + G+ ++ M+
Sbjct: 310 HAKRLLHELK----SPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVRDITVFERMI 365
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+ +F+ +G PDS+ L+ AY K + + + M++ G V
Sbjct: 366 HLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANGVYMEMQEVGCV 425
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 150/333 (45%), Gaps = 5/333 (1%)
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
F+ + Y +T ++ LI + KGQ A+ + G + D Y LI
Sbjct: 114 FQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLI---- 169
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
H K AL +++ G +PN+V Y+ ++ + ++V+ L+ E+ +
Sbjct: 170 HGLCKVGETRAALDLLRRVDG-NLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGI 228
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
+P++ TY+ ++ + G +K+ + ++M KPD+ TFN+L+D + K + +
Sbjct: 229 SPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKT 288
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
VF +M KP + T+ S++ Y + KA+ + M+ P +Y +I +
Sbjct: 289 VFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFC 348
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
V A +F E+ V T N++++ C G + A L + H+ GV PD
Sbjct: 349 KIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDII 408
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
TY + A K + + LL +++ GI PN
Sbjct: 409 TYSSILDALCKNHQVDKAIALLTKLKDQGIRPN 441
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 146/321 (45%), Gaps = 11/321 (3%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+YS +I M K A L+SEM + G P+ Y+ALI+ L A+
Sbjct: 199 MYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFF----TVGQLKDAIDL 254
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F KM +E KP++ T+NIL+ + + + +F + + + P++ TY +MD Y
Sbjct: 255 FNKMI-LENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYC 313
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+ + +S+L M PDI ++N+LID + K + D+ +FK + H P +
Sbjct: 314 LVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVV 373
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECIITMYGYCDNVSRAREIF 383
T+NS+I G +L GK Y + + M P ITY I+ V +A +
Sbjct: 374 TYNSLI--DGLCKL-GKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALL 430
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+L G + T +++ C G +A +FE+ G +TY ++ +
Sbjct: 431 TKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNK 490
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+ + LL +M+ N +P+
Sbjct: 491 GLFDEALALLSKMKDNSCIPD 511
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 147/315 (46%), Gaps = 9/315 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + K G+TR A+ L + + +P+ +Y+ +I K K + A +
Sbjct: 165 YGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMC----KDKHVNDAFDLY 220
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M KG+ PN+VTY+ L+ + LF ++ + PD+YT+N ++D +
Sbjct: 221 SEMVSKGIS---PNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGF 277
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K+G +KE ++V + M KP+++T+ L+D Y + +K + + ++ P +
Sbjct: 278 CKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDI 337
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
++N +I + K + +A +F++M P +TY +I +S A ++ DE
Sbjct: 338 QSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDE 397
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ G + T +++L+A C N +A L + G+ P+ TY +L K
Sbjct: 398 MHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGR 457
Query: 446 KELVQKLLKRMEQNG 460
E + + + G
Sbjct: 458 LEDAHNIFEDLLVKG 472
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 112/254 (44%), Gaps = 6/254 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + K K + VF M KQ + Y L+ + A + M
Sbjct: 272 ILVDGFCKDGKMKEGKTVFAMMMKQGIK-PNVVTYCSLMDGYCLVKEVNKAKSILYTMSQ 330
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G PD YN LI K K + +A+ F++M + P++VTYN L+ +
Sbjct: 331 RGVNPDIQSYNILIDGFC----KIKKVDEAMNLFKEMH-HKHIIPDVVTYNSLIDGLCKL 385
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ L E+H+ + PDI TY+ ++DA KN + + ++L+++K +P++ T+
Sbjct: 386 GKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTY 445
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+LID K + +F+ L+ T+ T+ MI + L +A + KM
Sbjct: 446 TILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKD 505
Query: 354 MKYTPSFITYECII 367
P +TYE II
Sbjct: 506 NSCIPDAVTYEIII 519
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 88/214 (41%), Gaps = 40/214 (18%)
Query: 134 WMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT 193
+ QR D Y+ LI K + AM LF EM + PD YN+LI
Sbjct: 326 YTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLC-- 383
Query: 194 RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP 253
K ++ AL +M P+I+TY+ +L A + VD+ AL +L + + P
Sbjct: 384 --KLGKISYALKLVDEMHD-RGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRP 440
Query: 254 DIYTYNGVMDAYGKN-----------------------------------GMIKEMESVL 278
++YTY ++D K G+ E ++L
Sbjct: 441 NMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALL 500
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
S+MK N C PD +T+ ++I S + DK E++
Sbjct: 501 SKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKL 534
>gi|440800754|gb|ELR21789.1| pentatricopeptide repeat domain/PPR repeatcontaining protein
[Acanthamoeba castellanii str. Neff]
Length = 559
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 153/334 (45%), Gaps = 9/334 (2%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
++ L+ G+ G + + +MR G RP S Y LI A KA L +
Sbjct: 100 VFDVLLQGYGRAGDRQRLAQVQRDMREVGVRPGMSTYTILIDAW----GKAGDLRRMWQA 155
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI---LAPDIYTYNGVMD 263
++ M+ + +PN+V Y ++ + +V + F E+ S + P+ TYN ++
Sbjct: 156 WEDMR-EQGLRPNVVVYTSVIATLGKLGDVAAMERTFAEMQRSSGDGVEPNRTTYNAMVH 214
Query: 264 AYGKNGMIKEMESVLSRMKSNQ-CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+YG+ M+ +ME+++ RM+++ D T + ++ ++ + DK + F S+ + +
Sbjct: 215 SYGQQQMMDKMEALVERMRADPGLGLDNFTHSAVVAAWSRAGRVDKALEAFDSIAATGGQ 274
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P+L + +++ G A + KM + PS Y II +G N+ +
Sbjct: 275 PSLHAWTAILHMLGTAGRSDEMLRTLDKMKRLGVKPSTAVYNTIINAFGKARNIHSMMDT 334
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
F + + G V T N +++ + G EA+ + G+ P T L AYT+
Sbjct: 335 FKAMRRDGVAADVKTYNTLIDTWAKTGKAVEAEKFYVLMKREGLQPTMYTIASLMDAYTR 394
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
A+ E V +L+ RM++ G P+ F ++T+
Sbjct: 395 ADQFEKVLRLISRMKKEGRAPDNVVFNLLIDTYG 428
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 123/266 (46%), Gaps = 10/266 (3%)
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+ +++LL+ +A + ++ + +++ E + P + TY ++DA+GK G ++ M
Sbjct: 98 LAVFDVLLQGYGRAGDRQRLAQVQRDMREVGVRPGMSTYTILIDAWGKAGDLRRMWQAWE 157
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE---KPTLPTFNSMIINYG 336
M+ +P+++ + +I + GK ME+ F + S +P T+N+M+ +YG
Sbjct: 158 DMREQGLRPNVVVYTSVIATLGKLGDVAAMERTFAEMQRSSGDGVEPNRTTYNAMVHSYG 217
Query: 337 KARLQGKAEYVFQKMTAMKYTPSF----ITYECIITMYGYCDNVSRAREIFDELSKLGKD 392
+ ++ K E + ++M A P T+ ++ + V +A E FD ++ G
Sbjct: 218 QQQMMDKMEALVERMRA---DPGLGLDNFTHSAVVAAWSRAGRVDKALEAFDSIAATGGQ 274
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
+ A+L G E + +GV P ++ Y + A+ KA +
Sbjct: 275 PSLHAWTAILHMLGTAGRSDEMLRTLDKMKRLGVKPSTAVYNTIINAFGKARNIHSMMDT 334
Query: 453 LKRMEQNGIVPNKRFFLEALETFSSS 478
K M ++G+ + + + ++T++ +
Sbjct: 335 FKAMRRDGVAADVKTYNTLIDTWAKT 360
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 138/314 (43%), Gaps = 8/314 (2%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNS---GCRPDPSVYNALITAHLHTRDKAKALAKA 203
+Y+ +IA +GK G F+EM+ S G P+ + YNA++ H+ + + + K
Sbjct: 170 VYTSVIATLGKLGDVAAMERTFAEMQRSSGDGVEPNRTTYNAMV----HSYGQQQMMDKM 225
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
++M+ + T++ ++ A ++A VD+ F + + P ++ + ++
Sbjct: 226 EALVERMRADPGLGLDNFTHSAVVAAWSRAGRVDKALEAFDSIAATGGQPSLHAWTAILH 285
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
G G EM L +MK KP +N +I+++GK + M FK++
Sbjct: 286 MLGTAGRSDEMLRTLDKMKRLGVKPSTAVYNTIINAFGKARNIHSMMDTFKAMRRDGVAA 345
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T+N++I + K +AE + M P+ T ++ Y D + +
Sbjct: 346 DVKTYNTLIDTWAKTGKAVEAEKFYVLMKREGLQPTMYTIASLMDAYTRADQFEKVLRLI 405
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD-LLFENSHNMGVTPDSSTYKLLYKAYTK 442
+ K G+ N +++ Y G P EA+ +L G+ +++ + + +A+ +
Sbjct: 406 SRMKKEGRAPDNVVFNLLIDTYGRMGKPEEAEKVLCGAMKEYGIALETNNFTSVIEAWAR 465
Query: 443 ANMKELVQKLLKRM 456
+ ++ L RM
Sbjct: 466 NGNLDKAEEWLHRM 479
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 123/294 (41%), Gaps = 41/294 (13%)
Query: 41 NFTHRHIPLSLRTRPRTGICCVWTRPRSKRGRKSEELESKELVRVLMRSFSDKEPLVRTL 100
NFTH + + W+R GR + LE+ + + + + +P +L
Sbjct: 242 NFTH------------SAVVAAWSRA----GRVDKALEAFDSI-----AATGGQP---SL 277
Query: 101 NKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQ 160
+ + ++ + G+SD+ L+ L+ + + + T +Y+ +I GK
Sbjct: 278 HAWTAILH------MLGTAGRSDEMLRTLDKMKRLGVK----PSTAVYNTIINAFGKARN 327
Query: 161 TRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNI 220
M F MR G D YN LI T KA+ +A ++ MK E +P +
Sbjct: 328 IHSMMDTFKAMRRDGVAADVKTYNTLIDTWAKT---GKAV-EAEKFYVLMK-REGLQPTM 382
Query: 221 VTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL-S 279
T L+ A +A ++V L + + APD +N ++D YG+ G +E E VL
Sbjct: 383 YTIASLMDAYTRADQFEKVLRLISRMKKEGRAPDNVVFNLLIDTYGRMGKPEEAEKVLCG 442
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL-MHSKEKPTLPTFNSMI 332
MK + F +I+++ + DK E+ + KP + T +++
Sbjct: 443 AMKEYGIALETNNFTSVIEAWARNGNLDKAEEWLHRMNTDYATKPDIKTLTTLL 496
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 149/325 (45%), Gaps = 5/325 (1%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+R Y D + LI + G+ + A++ ++ G + D Y LI L +
Sbjct: 156 KRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLING-LCKAGET 214
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
KA+A+ L +K++G KP++V Y ++ + + V L+ E+ ++P+++T
Sbjct: 215 KAVARLL---RKLEG-HSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFT 270
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN ++ + G +KE S+L+ MK PD+ TFN+LID+ GK D+ +F+ +
Sbjct: 271 YNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMK 330
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
H P + T+ S+I K +A + +KM P +Y ++ +
Sbjct: 331 HKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLE 390
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
A++ F L G + V T N M+ C GL + L G PD+ T+K +
Sbjct: 391 NAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTII 450
Query: 438 KAYTKANMKELVQKLLKRMEQNGIV 462
A + + + +K L+ M G++
Sbjct: 451 CALFEKDENDKAEKFLREMIARGLL 475
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 142/359 (39%), Gaps = 16/359 (4%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ L K+ +L + +F+ Q + + LI A +F+ +
Sbjct: 99 ILSSLVKNKHYLTVISLFKQFQ-SNGVTPNLCTLNILINCFCHLAHITFAFSVFANILKR 157
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G PD N LI + +AL YF + + + V+Y L+ +A
Sbjct: 158 GYHPDAITLNTLIKGLCFCGEIKRAL-----YFHDKVVAQGFQLDQVSYGTLINGLCKAG 212
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
V L ++L + PD+ Y ++ KN + + + S M P++ T+N
Sbjct: 213 ETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYN 272
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEK---PTLPTFNSMIINYGKARLQGKAEYVFQKM 351
LI + +++ F L K K P + TFN +I GK +A +F++M
Sbjct: 273 TLIYGFC---IMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEM 329
Query: 352 TAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
P+ +TY +I G C N + RA + ++ + G V + +L+A C G
Sbjct: 330 KHKNMFPNIVTYTSLID--GLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGG 387
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
A F++ G + TY ++ KA + V L +ME G +P+ F
Sbjct: 388 RLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITF 446
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/319 (19%), Positives = 130/319 (40%), Gaps = 23/319 (7%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+ +++ + K + LF + +++G P+ N LI H A +
Sbjct: 96 FDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANIL 155
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP----DIYTYNGVMD 263
++ P+ +T N L++ + + AL+ H+ ++A D +Y +++
Sbjct: 156 KRGY-----HPDAITLNTLIKGLCFCGEIKR--ALY--FHDKVVAQGFQLDQVSYGTLIN 206
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K G K + +L +++ + KPD++ + +I K + ++ ++ P
Sbjct: 207 GLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISP 266
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECIITMYGYCDNVSRAR 380
+ T+N++I YG + G + F + MK P T+ +I G + A
Sbjct: 267 NVFTYNTLI--YGFC-IMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAI 323
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+F+E+ + T ++++ C N A L + G+ PD +Y +L A
Sbjct: 324 SLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDAL 383
Query: 441 TKA----NMKELVQKLLKR 455
K N K+ Q LL +
Sbjct: 384 CKGGRLENAKQFFQHLLVK 402
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 121/299 (40%), Gaps = 40/299 (13%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A+ F +M M R P ++ +L + + ++ V +LFK+ + + P++ T N ++
Sbjct: 77 AVASFNRMLLM-RPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILI 135
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID------------------------ 298
+ + I SV + + PD IT N LI
Sbjct: 136 NCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQ 195
Query: 299 ----SYG-------KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
SYG K + ++ + L KP + + ++I K + G A +
Sbjct: 196 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDL 255
Query: 348 FQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+ +M +P+ TY +I YG+C N+ A + +E+ + V T N +++A
Sbjct: 256 YSEMIVKGISPNVFTYNTLI--YGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDAL 313
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G EA LFE + + P+ TY L K + E L K+M++ GI P+
Sbjct: 314 GKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPD 372
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 175/392 (44%), Gaps = 13/392 (3%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI--YSKLIAVMGKKGQTRLAMWLFSEM 171
+L + L + K + VFR M K GI ++ LI K+G A L S M
Sbjct: 317 ILIDRLCREGKIEEANGVFRKMLKHGLC---PGIITFNALINGYCKEGWVVSAFQLLSVM 373
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
C+P+ YN L+ KA G+ P+ VTYNIL+
Sbjct: 374 EKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDN--GL---LPDRVTYNILVDGFC 428
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ ++ +F ++ + L PD +T+ ++D K G +++ +L M D +
Sbjct: 429 KEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEV 488
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
TF LID + K + +F++++ ++ T TFN + GK +A + KM
Sbjct: 489 TFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKM 548
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
PS +T+ +I + + + ++ + + + G V T ++ C NG
Sbjct: 549 MKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRV 608
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
EA+ + + + GV+P+ TY +L KA+ KA + +++ M +NG PN +
Sbjct: 609 EEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSAL 668
Query: 472 LETF--SSSLAGSQSGSAKTDL-TRSLSTAKS 500
L F S++ G+++ S+ DL RSLS+ ++
Sbjct: 669 LSGFVLSNTAIGARALSSTGDLDARSLSSEEN 700
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 160/382 (41%), Gaps = 46/382 (12%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
+ D + VF M K+ ++ YS LI + + G+ A L EM GC+P
Sbjct: 218 RRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPST 277
Query: 181 SVYNALITA--HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL-RACAQARNVD 237
Y LI A + DKA + + + C PN+ TY IL+ R C + + ++
Sbjct: 278 RTYTVLIKAKCDIGMTDKAMKMLDEMA-------TKACVPNVHTYTILIDRLCREGK-IE 329
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ N +F+++ + L P I T+N +++ Y K G + +LS M+ CKP+I T+N L+
Sbjct: 330 EANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELM 389
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+ + K + + ++ + P T+N ++ + K A +F M +
Sbjct: 390 EGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLE 449
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P T+ +I + +A I + K G + T A+++ +C G + L
Sbjct: 450 PDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFL 509
Query: 418 FEN---------SHNM--------------------------GVTPDSSTYKLLYKAYTK 442
FEN +H G+ P T+ +L + + +
Sbjct: 510 FENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCR 569
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
A L K+L+RM+Q G PN
Sbjct: 570 AGETALSLKMLERMKQAGCSPN 591
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 154/338 (45%), Gaps = 19/338 (5%)
Query: 131 VFRWMQKQRWYIADTGI-YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
V+R M + + + GI Y ++ + K G + A ++ G D V +L+ A
Sbjct: 158 VYRRMVNEGFVLG--GIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLA 215
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ D L +A F+KM E C+PN VTY+IL+ +A +++ L +E+ E
Sbjct: 216 NCRRDD----LGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK 271
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
P TY ++ A GM + +L M + C P++ T+ +LID + ++
Sbjct: 272 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 331
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECI 366
VF+ ++ P + TFN++I Y K +G FQ ++ M+ P+ TY +
Sbjct: 332 NGVFRKMLKHGLCPGIITFNALINGYCK---EGWVVSAFQLLSVMEKGNCKPNIRTYNEL 388
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVS---TLNAMLEAYCMNGLPTEADLLFENSHN 423
M G C VS++ + F L ++ + + T N +++ +C G A +F + ++
Sbjct: 389 --MEGLC-RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNS 445
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
G+ PD T+ L K E +L M + GI
Sbjct: 446 AGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGI 483
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 137/322 (42%), Gaps = 9/322 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++ LI K G+ + +LF M + C +N + A L K
Sbjct: 486 DEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDA-LGKDYKLNEANAM 544
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
LG K + P++VT+ IL+ +A + + + ++ +P++YTY +++
Sbjct: 545 LGKMMKYGLV----PSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIIN 600
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
NG ++E E++L M S P+ T+ +L+ ++ K D+ Q+ +++ + +P
Sbjct: 601 GLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQP 660
Query: 324 TLPTFNSMIINY--GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
+++++ + + +A + A + C+ + +V A +
Sbjct: 661 NSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALK 720
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
I DE+ K G + N ++ C G EAD L ++ G+ PD + ++ + Y
Sbjct: 721 IRDEIKKCGVPTE-DLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSII-EHYC 778
Query: 442 KANMKELVQKLLKRMEQNGIVP 463
K + + +K + N VP
Sbjct: 779 KTCKYDNCLEFMKLVLDNKFVP 800
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 78/184 (42%)
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
K C+P+ +T+++LI + ++ Q+ + ++ +P+ T+ +I +
Sbjct: 234 KEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMT 293
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
KA + +M P+ TY +I + A +F ++ K G + T NA+
Sbjct: 294 DKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNAL 353
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ YC G A L P+ TY L + + + LL+R+ NG+
Sbjct: 354 INGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGL 413
Query: 462 VPNK 465
+P++
Sbjct: 414 LPDR 417
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 91/222 (40%), Gaps = 11/222 (4%)
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y V++A KNG ++ E ++ D L+ + +R + +VF+ +
Sbjct: 174 YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKM- 232
Query: 318 HSKE---KPTLPTFNSMIINYGKARLQGKAEYVFQ---KMTAMKYTPSFITYECIITMYG 371
SKE +P T++ +I +A G+ E FQ +M PS TY +I
Sbjct: 233 -SKEENCRPNSVTYSILIHGLCEA---GRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKC 288
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+A ++ DE++ V T +++ C G EA+ +F G+ P
Sbjct: 289 DIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGII 348
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
T+ L Y K +LL ME+ PN R + E +E
Sbjct: 349 TFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELME 390
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 150/340 (44%), Gaps = 16/340 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI G+ + + + EM G +PD Y +L+ +L + + +A
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLN-YLCNNGRCR---EA 327
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+F M KG+ KPN+ Y IL+ A + +++ L + E+ L+PD + +N +
Sbjct: 328 RFFFDSMIRKGI---KPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNII 384
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
AY K MI E + ++MK PD++ F LID+ K D F +M+
Sbjct: 385 FTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGV 444
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P + FNS++ KA+ + +M P + + I+ V +A+
Sbjct: 445 APNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQR 504
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ D + ++G V + ++ +C+ G EA + ++G+ PD TY L Y
Sbjct: 505 LIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYC 564
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
+A + + + M +NGI P + T+S+ L G
Sbjct: 565 RAGRIDDAYGVFREMLRNGITP-------GVVTYSTILHG 597
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 116/254 (45%), Gaps = 5/254 (1%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
NIV +L C R + ++ L K + E PD+ +YN ++ + +E +L
Sbjct: 129 NIVINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELL 188
Query: 279 SRMKSNQ---CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
M +Q C P+++++ +I+ + DK +F +M +P + T+ ++I
Sbjct: 189 HMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGL 248
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
KA++ +AE VFQ+M P TY C+I Y + +E+S G
Sbjct: 249 CKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDC 308
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY-TKANMKELVQKLLK 454
T ++L C NG EA F++ G+ P+ + Y +L Y TK + E+ LL
Sbjct: 309 YTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEM-HDLLN 367
Query: 455 RMEQNGIVPNKRFF 468
M +NG+ P+ F
Sbjct: 368 LMVENGLSPDHHIF 381
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 156/361 (43%), Gaps = 7/361 (1%)
Query: 109 SEHCF-LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWL 167
H F ++F K + + +F M KQ+ D + LI + K G+ A+
Sbjct: 377 DHHIFNIIFTAYAKKAMIDEAMHIFNKM-KQQGLSPDVVNFGALIDALCKLGRVDDAVLK 435
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
F++M N G P+ V+N+L+ L T DK + AK YF+ + + +P++V +N +L
Sbjct: 436 FNQMMNEGVAPNIFVFNSLVYG-LCTVDKWEK-AKEF-YFEMLN--QGIRPDVVFFNTIL 490
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
V + L + PD+ +Y ++ + G I E L M S K
Sbjct: 491 CNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLK 550
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
PD T+N L+ Y + D VF+ ++ + P + T+++++ R +A+ +
Sbjct: 551 PDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKEL 610
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
+ M + Y I+ + V A ++F L ++++T N M+ A
Sbjct: 611 YLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFK 670
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
+G +A LF + G+ PD TY L+ + + E L ME++G PN R
Sbjct: 671 SGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRM 730
Query: 468 F 468
Sbjct: 731 L 731
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 140/341 (41%), Gaps = 10/341 (2%)
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAM-WLFSEMRNSGCRPDPSVYNALITAH 190
F + K W + + + ++L+ + + R AM L M GC PD YN L+
Sbjct: 117 FGLILKSGWRVNNI-VINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGF 175
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
+ + +AL + L +G C PN+V+Y ++ VD+ LF E+ +
Sbjct: 176 CNEKRAEEAL-ELLHMMADSQG-RSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRG 233
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
+ P++ TY V+D K ++ E V +M KPD T+N LI Y + ++
Sbjct: 234 IQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVV 293
Query: 311 QVFKSLMHSKEKPTLPTFNSM---IINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
++ + + KP T+ S+ + N G+ R +A + F M P+ Y +I
Sbjct: 294 RMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCR---EARFFFDSMIRKGIKPNVAIYGILI 350
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
Y +S ++ + + + G N + AY + EA +F G++
Sbjct: 351 HGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLS 410
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
PD + L A K + +M G+ PN F
Sbjct: 411 PDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVF 451
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 137/357 (38%), Gaps = 48/357 (13%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I +GQ A LF EM + G +P+ Y +I KA+ + +A G F
Sbjct: 206 YATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLC----KAQVVDRAEGVF 261
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD-- 263
Q+M KG+ KP+ TYN L+ +V + +E+ L PD YTY +++
Sbjct: 262 QQMIDKGV---KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYL 318
Query: 264 ---------------------------------AYGKNGMIKEMESVLSRMKSNQCKPDI 290
Y G + EM +L+ M N PD
Sbjct: 319 CNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDH 378
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
FN++ +Y K+ D+ +F + P + F ++I K A F +
Sbjct: 379 HIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQ 438
Query: 351 MTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
M P+ + ++ YG C D +A+E + E+ G V N +L C
Sbjct: 439 MMNEGVAPNIFVFNSLV--YGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTK 496
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
G +A L + +G PD +Y L + + K L M G+ P++
Sbjct: 497 GQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDE 553
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 97/224 (43%), Gaps = 18/224 (8%)
Query: 111 HCFLLFEELGKSDKWLQCLEVFR--WMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLF 168
HC + G+ D+ + L+V ++ W Y+ L+ + G+ A +F
Sbjct: 528 HCLV-----GRIDEAAKSLDVMLSVGLKPDEW------TYNTLLHGYCRAGRIDDAYGVF 576
Query: 169 SEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLR 228
EM +G P Y+ ++ TR ++A L K + NI YNI+L
Sbjct: 577 REMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGK-----QWNIWIYNIILN 631
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
++ VD+ LF+ L +I T+N ++ A K+G ++ + + + S P
Sbjct: 632 GLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVP 691
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
D+ T+ L+ ++ + ++ + +F ++ S P N+++
Sbjct: 692 DVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALV 735
>gi|115482518|ref|NP_001064852.1| Os10g0476900 [Oryza sativa Japonica Group]
gi|110289255|gb|AAP54273.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|110289256|gb|ABG66138.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113639461|dbj|BAF26766.1| Os10g0476900 [Oryza sativa Japonica Group]
gi|215737151|dbj|BAG96080.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 599
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 133/261 (50%), Gaps = 9/261 (3%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
L+ ++ K + A+ + E+ GC+PD YNALI+A KA L A ++
Sbjct: 283 LVDLVCKNCGPQKALEVLDELSLEGCQPDVVTYNALISASC----KAGRLNDAKFILTRL 338
Query: 211 KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
E +PN TY ILL A R D+V L +++++ PD+ TYN ++ + K G
Sbjct: 339 AA-EGLEPNGTTYCILLHALCNMRRWDEVCDLLEDMNQVNRDPDVTTYNIFINYFCKYGH 397
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
+ + VL RM N C PDI+T N L+++ K+ ++ + + + + K L T+N+
Sbjct: 398 LDQAIDVLERMVINNCSPDIVTCNTLLNAISKKGMVEEALGIARCIRENGYKLVLITYNT 457
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSK 388
+I K KA +F +M + +P ITY ++ G+C D A ++ +++
Sbjct: 458 LIDALAKKAEVKKAMVLFDEMLSDGISPDDITYGSLV--MGFCKKDMADEALDLLNQMLT 515
Query: 389 LGKDMKVSTLNAMLEAYCMNG 409
LG ++K +T +++A C +G
Sbjct: 516 LGFEVKTTTFVMVIQALCRDG 536
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 138/350 (39%), Gaps = 40/350 (11%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
I +T ++I + K G+ A + M SG PD N LI A L + L+
Sbjct: 169 IPETKCCVRIIRGLVKTGKANKARHVLEVMVLSGGVPDTISCNMLI-AQLC---RGGQLS 224
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
AL + M+ C P+ +T+N L+R R D+ + +KE P T +
Sbjct: 225 SALQVLEDMR-FSGCSPSGITFNTLIRCMFNQRMYDRAISFWKEQLRLGWPPYEMTSTLL 283
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR------------------ 303
+D KN ++ VL + C+PD++T+N LI + K
Sbjct: 284 VDLVCKNCGPQKALEVLDELSLEGCQPDVVTYNALISASCKAGRLNDAKFILTRLAAEGL 343
Query: 304 -----------------QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
+ +D++ + + + P + T+N I + K +A
Sbjct: 344 EPNGTTYCILLHALCNMRRWDEVCDLLEDMNQVNRDPDVTTYNIFINYFCKYGHLDQAID 403
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
V ++M +P +T ++ V A I + + G + + T N +++A
Sbjct: 404 VLERMVINNCSPDIVTCNTLLNAISKKGMVEEALGIARCIRENGYKLVLITYNTLIDALA 463
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
+A +LF+ + G++PD TY L + K +M + LL +M
Sbjct: 464 KKAEVKKAMVLFDEMLSDGISPDDITYGSLVMGFCKKDMADEALDLLNQM 513
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 6/215 (2%)
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
LH I P+ ++ K G + VL M + PD I+ N+LI +
Sbjct: 165 LHGQI--PETKCCVRIIRGLVKTGKANKARHVLEVMVLSGGVPDTISCNMLIAQLCRGGQ 222
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
QV + + S P+ TFN++I R+ +A +++ + + P +T
Sbjct: 223 LSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMYDRAISFWKEQLRLGWPPYEMTSTL 282
Query: 366 IITMYGYCDNVS--RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
++ + C N +A E+ DELS G V T NA++ A C G +A +
Sbjct: 283 LVDLV--CKNCGPQKALEVLDELSLEGCQPDVVTYNALISASCKAGRLNDAKFILTRLAA 340
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
G+ P+ +TY +L A + V LL+ M Q
Sbjct: 341 EGLEPNGTTYCILLHALCNMRRWDEVCDLLEDMNQ 375
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 160/389 (41%), Gaps = 45/389 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIA-DTGIYSKLIAVMGKKGQTRLAMWLFSEMR 172
+L + L K Q ++ R M + + D Y+ +I K+G A LF EM
Sbjct: 189 ILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMV 248
Query: 173 NSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRAC 230
G PD Y++++ H KA+A+ KA + ++M KG+ P+ TYN L+
Sbjct: 249 QRGIPPDLVTYSSVV----HALCKARAMDKAEAFLRQMVNKGV---LPDNWTYNNLIYGY 301
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
+ + +FKE+ + PD+ N +M + K G IKE V M PD+
Sbjct: 302 SSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDV 361
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
++ ++++ Y + M +F ++ P + TFN +I Y + KA +F +
Sbjct: 362 FSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNE 421
Query: 351 MTAMKYTPSFITYECIIT---------------------------------MYGYCDNVS 377
M P +TY +I + G+C + S
Sbjct: 422 MRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGS 481
Query: 378 --RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+A+E+ E+ G + + +++ C G +A +F+ + N+G+ PD+ Y +
Sbjct: 482 LLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNM 541
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L Y E ++ M GI PN
Sbjct: 542 LMDGYCLVGKMEKALRVFDAMVSAGIEPN 570
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 148/321 (46%), Gaps = 10/321 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL-HTRDKAKALAKALGY 206
Y+ L+ + + LA+ F ++ +G R D A+I +HL +AK +AL
Sbjct: 116 YAILMDCCTRAHRPELALAFFGQLLRTGLRVD-----AIIASHLLKGFCEAKRTDEALDI 170
Query: 207 FQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHE--SILAPDIYTYNGVMD 263
C P++ +YNILL++ C Q ++ Q + L + + E ++ +PD+ YN V+D
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKS-GQADDLLRMMAEGGTVCSPDVVAYNTVID 229
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ K G + + + M PD++T++ ++ + K +A DK E + +++ P
Sbjct: 230 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP 289
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T+N++I Y +A VF++M P + ++ + AR++F
Sbjct: 290 DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVF 349
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
D ++ G++ V + ML Y G + LF+ G+ P T+ +L KAY
Sbjct: 350 DTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANC 409
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
M + + M +G+ P+
Sbjct: 410 GMLDKAMIIFNEMRDHGVKPH 430
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 138/308 (44%), Gaps = 13/308 (4%)
Query: 175 GCRPDPSVYNALITAHLHTRDKAKA--LAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
GC PD YN L+ + + +A L + + +G C P++V YN ++ +
Sbjct: 179 GCVPDVFSYNILLKSLCNQGKSGQADDLLRMMA-----EGGTVCSPDVVAYNTVIDGFFK 233
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+V++ LFKE+ + + PD+ TY+ V+ A K + + E+ L +M + PD T
Sbjct: 234 EGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWT 293
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM---IINYGKARLQGKAEYVFQ 349
+N LI Y + + +VFK + P + N++ + YGK + +A VF
Sbjct: 294 YNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIK---EARDVFD 350
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
M P +Y ++ Y + ++FD + G + T N +++AY G
Sbjct: 351 TMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCG 410
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFL 469
+ +A ++F + GV P TY + A + + + +M G+VP+K +
Sbjct: 411 MLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYH 470
Query: 470 EALETFSS 477
++ F +
Sbjct: 471 CLIQGFCT 478
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 144/346 (41%), Gaps = 10/346 (2%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
+ +W + + VF+ M++Q + D + L+ + K G+ + A +F M G PD
Sbjct: 304 TGQWKEAVRVFKEMRRQSI-LPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 362
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
Y ++ + L F M G + P I T+N+L++A A +D+
Sbjct: 363 SYTIMLNGYA----TKGCLVDMTDLFDLMLG-DGIAPVICTFNVLIKAYANCGMLDKAMI 417
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
+F E+ + + P + TY V+ A + G + + ++M PD ++ LI +
Sbjct: 418 IFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFC 477
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
+ K +++ +M++ + + F S+I N K A+ +F + P +
Sbjct: 478 THGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 537
Query: 362 TYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
Y + M GYC + +A +FD + G + V ++ YC G E LF
Sbjct: 538 VYN--MLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFR 595
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
G+ P + Y ++ +A + M ++GI NK
Sbjct: 596 EMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNK 641
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 135/324 (41%), Gaps = 11/324 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y +IA + + G+ AM F++M + G PD Y+ LI KA K L
Sbjct: 434 YMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKA--KELISE 491
Query: 208 QKMKGMERCKPNIVTYN-ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
GM + +IV + I+ C R +D N +F L PD YN +MD Y
Sbjct: 492 IMNNGM---RLDIVFFGSIINNLCKLGRVMDAQN-IFDLTVNVGLHPDAVVYNMLMDGYC 547
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
G +++ V M S +P+++ + L++ Y K D+ +F+ ++ KP+
Sbjct: 548 LVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTI 607
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFD 384
+N +I +A A+ F +MT + TY I + G N A +F
Sbjct: 608 LYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYS--IVLRGLFKNRCFDEAIFLFK 665
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
EL + + + TLN M+ EA LF + G+ P + TY ++ K
Sbjct: 666 ELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEG 725
Query: 445 MKELVQKLLKRMEQNGIVPNKRFF 468
+ E + + M+ G P+ R
Sbjct: 726 LVEEAEDMFSSMQNAGCEPDSRLL 749
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 132/316 (41%), Gaps = 5/316 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ LI G AM +F+EMR+ G +P Y +I A A+ K F
Sbjct: 399 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK----F 454
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M + P+ Y+ L++ ++ + L E+ + + DI + +++ K
Sbjct: 455 NQMID-QGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCK 513
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + + +++ + PD + +N+L+D Y +K +VF +++ + +P +
Sbjct: 514 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG 573
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ +++ Y K + +F++M PS I Y II A+ F E++
Sbjct: 574 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT 633
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ G M T + +L N EA LF+ M V D T + + E
Sbjct: 634 ESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVE 693
Query: 448 LVQKLLKRMEQNGIVP 463
+ L + ++G+VP
Sbjct: 694 EAKDLFASISRSGLVP 709
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 113/263 (42%), Gaps = 19/263 (7%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D + +I + K G+ A +F N G PD VYN L+ + + KA
Sbjct: 500 DIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLV----GKMEKA 555
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
L F M G+E PN+V Y L+ + +D+ +LF+E+ + + P YN +
Sbjct: 556 LRVFDAMVSAGIE---PNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 612
Query: 262 MDAYGKNGM-----IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+D + G +K E S + N+C T+++++ K + FD+ +FK L
Sbjct: 613 IDGLFEAGRTVPAKVKFHEMTESGIAMNKC-----TYSIVLRGLFKNRCFDEAIFLFKEL 667
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
K + T N+MI + R +A+ +F ++ P +TY +IT V
Sbjct: 668 RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLV 727
Query: 377 SRAREIFDELSKLGKDMKVSTLN 399
A ++F + G + LN
Sbjct: 728 EEAEDMFSSMQNAGCEPDSRLLN 750
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
++G+ D+ L +FR M Q+ T +Y+ +I + + G+T A F EM SG
Sbjct: 583 KIGRIDEGLS---LFREML-QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIA 638
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
+ Y+ ++ K + +A+ F++++ M K +I+T N ++ Q R V+
Sbjct: 639 MNKCTYSIVLRGLF----KNRCFDEAIFLFKELRAMN-VKIDIITLNTMIAGMFQTRRVE 693
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
+ LF + S L P TY+ ++ K G+++E E + S M++ C+PD
Sbjct: 694 EAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPD 745
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 10/200 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y L+ K G+ + LF EM G +P +YN +I A K
Sbjct: 574 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT 633
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ M +C TY+I+LR + R D+ LFKEL + DI T N ++ +
Sbjct: 634 ESGIAMNKC-----TYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQ 688
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
++E + + + + + P +T++++I + K ++ E +F S+ ++ +P
Sbjct: 689 TRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEP---- 744
Query: 328 FNSMIINYGKARLQGKAEYV 347
+S ++N+ L K E V
Sbjct: 745 -DSRLLNHVVRELLKKNEIV 763
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 160/382 (41%), Gaps = 46/382 (12%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
+ D + VF M K+ ++ YS LI + + G+ A L EM GC+P
Sbjct: 175 RRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPST 234
Query: 181 SVYNALITA--HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL-RACAQARNVD 237
Y LI A + DKA + + + C PN+ TY IL+ R C + + ++
Sbjct: 235 RTYTVLIKAKCDIGMTDKAMKMLDEMA-------TKACVPNVHTYTILIDRLCREGK-IE 286
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ N +F+++ + L P I T+N +++ Y K G + +LS M+ CKP+I T+N L+
Sbjct: 287 EANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELM 346
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+ + K + + ++ + P T+N ++ + K A +F M +
Sbjct: 347 EGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLE 406
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P T+ +I + +A I + K G + T A+++ +C G + L
Sbjct: 407 PDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFL 466
Query: 418 FEN---------SHNM--------------------------GVTPDSSTYKLLYKAYTK 442
FEN +H G+ P T+ +L + + +
Sbjct: 467 FENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCR 526
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
A L K+L+RM+Q G PN
Sbjct: 527 AGETALSLKMLERMKQAGCSPN 548
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 175/392 (44%), Gaps = 13/392 (3%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI--YSKLIAVMGKKGQTRLAMWLFSEM 171
+L + L + K + VFR M K GI ++ LI K+G A L S M
Sbjct: 274 ILIDRLCREGKIEEANGVFRKMLKHGLC---PGIITFNALINGYCKEGWVVSAFQLLSVM 330
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
C+P+ YN L+ KA G+ P+ VTYNIL+
Sbjct: 331 EKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDN--GL---LPDRVTYNILVDGFC 385
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ ++ +F ++ + L PD +T+ ++D K G +++ +L M D +
Sbjct: 386 KEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEV 445
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
TF LID + K + +F++++ ++ T TFN + GK +A + KM
Sbjct: 446 TFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKM 505
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
PS +T+ +I + + + ++ + + + G V T ++ C NG
Sbjct: 506 MKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRV 565
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
EA+ + + + GV+P+ TY +L KA+ KA + +++ M +NG PN +
Sbjct: 566 EEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSAL 625
Query: 472 LETF--SSSLAGSQSGSAKTDL-TRSLSTAKS 500
L F S++ G+++ S+ DL RSLS+ ++
Sbjct: 626 LSGFVLSNTAIGARALSSTGDLDARSLSSEEN 657
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 154/338 (45%), Gaps = 19/338 (5%)
Query: 131 VFRWMQKQRWYIADTGI-YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
V+R M + + + GI Y ++ + K G + A ++ G D V +L+ A
Sbjct: 115 VYRRMVNEGFVLG--GIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLA 172
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ D L +A F+KM E C+PN VTY+IL+ +A +++ L +E+ E
Sbjct: 173 NCRRDD----LGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK 228
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
P TY ++ A GM + +L M + C P++ T+ +LID + ++
Sbjct: 229 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 288
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECI 366
VF+ ++ P + TFN++I Y K +G FQ ++ M+ P+ TY +
Sbjct: 289 NGVFRKMLKHGLCPGIITFNALINGYCK---EGWVVSAFQLLSVMEKGNCKPNIRTYNEL 345
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVS---TLNAMLEAYCMNGLPTEADLLFENSHN 423
M G C VS++ + F L ++ + + T N +++ +C G A +F + ++
Sbjct: 346 --MEGLC-RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNS 402
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
G+ PD T+ L K E +L M + GI
Sbjct: 403 AGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGI 440
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 138/323 (42%), Gaps = 9/323 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++ LI K G+ + +LF M + C +N + A L K
Sbjct: 443 DEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDA-LGKDYKLNEANAM 501
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
LG K + P++VT+ IL+ +A + + + ++ +P++YTY +++
Sbjct: 502 LGKMMKYGLV----PSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIIN 557
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
NG ++E E++L M S P+ T+ +L+ ++ K D+ Q+ +++ + +P
Sbjct: 558 GLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQP 617
Query: 324 TLPTFNSMIINY--GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
+++++ + + +A + A + C+ + +V A +
Sbjct: 618 NSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALK 677
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
I DE+ K G + N ++ C G EAD L ++ G+ PD + ++ + Y
Sbjct: 678 IRDEIKKCGVPTE-DLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISSII-EHYC 735
Query: 442 KANMKELVQKLLKRMEQNGIVPN 464
K + + +K + N VP+
Sbjct: 736 KTCKYDNCLEFMKLVLDNKFVPS 758
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 78/184 (42%)
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
K C+P+ +T+++LI + ++ Q+ + ++ +P+ T+ +I +
Sbjct: 191 KEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMT 250
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
KA + +M P+ TY +I + A +F ++ K G + T NA+
Sbjct: 251 DKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNAL 310
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ YC G A L P+ TY L + + + LL+R+ NG+
Sbjct: 311 INGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGL 370
Query: 462 VPNK 465
+P++
Sbjct: 371 LPDR 374
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 91/222 (40%), Gaps = 11/222 (4%)
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y V++A KNG ++ E ++ D L+ + +R + +VF+ +
Sbjct: 131 YRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKM- 189
Query: 318 HSKEKPTLP---TFNSMIINYGKARLQGKAEYVFQ---KMTAMKYTPSFITYECIITMYG 371
SKE+ P T++ +I +A G+ E FQ +M PS TY +I
Sbjct: 190 -SKEESCRPNSVTYSILIHGLCEA---GRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKC 245
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+A ++ DE++ V T +++ C G EA+ +F G+ P
Sbjct: 246 DIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGII 305
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
T+ L Y K +LL ME+ PN R + E +E
Sbjct: 306 TFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELME 347
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 144/319 (45%), Gaps = 5/319 (1%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
R+ D Y ++ + K + A+ EM G +PD +YN +++ L +K +
Sbjct: 3 RYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSG-LCQEEKVE 61
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
+A F+KM +R PN+VTYN L+ +A ++ LFKE+ P +Y
Sbjct: 62 ---EARLLFEKMV-KQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSY 117
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N ++D + K + + V +M + C P+++T+ LID K +V ++
Sbjct: 118 NTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVK 177
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
P + T++ +I + K R +A + ++M P+ +TY ++ D +
Sbjct: 178 KGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLED 237
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A ++F +++ V T N +L A C + A L+ G PD+ TY L
Sbjct: 238 AFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAW 297
Query: 439 AYTKANMKELVQKLLKRME 457
T+A Q+L+++M+
Sbjct: 298 GLTRAGKVHEAQELMEKMK 316
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 111/246 (45%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+ +TY ++ + + +D A +E+ + PD + YN V+ + ++E +
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
+M + P+++T+N LI+ K + ++FK + PT ++N++I + K
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
+ A+ VF KM P+ +TY +I V A E+ D + K G V+T
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
+ +++ +C EA L E G+ P TY +L + +A+ E KL + M
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246
Query: 458 QNGIVP 463
Q P
Sbjct: 247 QRRCHP 252
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 119/288 (41%), Gaps = 7/288 (2%)
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
PD Y ++ K K + AL ++M KP+ YN +L Q V+
Sbjct: 7 PDALTYGPIVERLC----KTKRIDDALATVEEM-ATRGIKPDAFIYNFVLSGLCQEEKVE 61
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ LF+++ + + P++ TYN +++ K I+ + M P +++N LI
Sbjct: 62 EARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLI 121
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK-ARLQGKAEYVFQKMTAMKY 356
D + K++ + VF ++ S P + T+ ++I K ++Q AE V M
Sbjct: 122 DGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAE-VLDGMVKKGV 180
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
TP+ TY C+I + V A ++ +++ G V T N +L + C +A
Sbjct: 181 TPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFK 240
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
LF P TY L +A + +L M G P+
Sbjct: 241 LFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPD 288
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 107/229 (46%), Gaps = 6/229 (2%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E+F+ M + Y+ Y+ LI KK A +F +M S C P+ Y LI
Sbjct: 100 ELFKEMA-GKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDG 158
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
L K +A A+ L K KG+ PN+ TY+ L+ + R VD+ + L +++
Sbjct: 159 -LSKSGKVQAAAEVLDGMVK-KGV---TPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQ 213
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+AP + TYN ++++ + +++ + M +C P ++T+N L+ + + D
Sbjct: 214 GIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGA 273
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
+++ ++ P T++++ +A +A+ + +KM K P
Sbjct: 274 HRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 322
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 44/118 (37%)
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P +TY I+ + A +E++ G N +L C EA LL
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
FE + P+ TY L KA E +L K M G VP + + ++ F
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGF 124
>gi|326499175|dbj|BAK06078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 566
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 140/322 (43%), Gaps = 6/322 (1%)
Query: 134 WMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT 193
W+Q Y D ++ +I + K G + A+ L M GC PD +N L+
Sbjct: 224 WIQGGV-YSPDVWSFNVVIKGVCKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLC-- 280
Query: 194 RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP 253
+AK ++K ++++ C PN+VTY ++ +A ++ A++ ++ +P
Sbjct: 281 --RAKEVSKGREVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSP 338
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
++ TYN +++ YGK G + +V +M +C PD++TF+ LID Y + D +++
Sbjct: 339 NVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIW 398
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA-MKYTPSFITYECIITMYGY 372
+ +P TF +I + K G+A + +KM P Y +I +
Sbjct: 399 TEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKMNMRTDIAPQAFIYNPVIDVLCK 458
Query: 373 CDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
V A I E+ + G T ++ +CM G EA F G +PDS
Sbjct: 459 GGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGRIAEAVTFFHKMVETGCSPDSIV 518
Query: 433 YKLLYKAYTKANMKELVQKLLK 454
K+ M V +++
Sbjct: 519 VNSFISCLLKSGMPGEVDHIMR 540
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 149/348 (42%), Gaps = 8/348 (2%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
+S + L++F M Q Y + S L G A L S+ GC +
Sbjct: 139 QSGRHTDALQLFDQMTDQSGYFPNARFLSFLSGSCAAAGLLDAAAALLSKASQFGCSIEA 198
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
YN L+ + A+A G+ Q G+ P++ ++N++++ + +V +
Sbjct: 199 YAYNKLMDLFIGHGRVQDAVALFEGWIQ--GGVY--SPDVWSFNVVIKGVCKVGDVQKAL 254
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ-CKPDIITFNLLIDS 299
L + + E +PD T+N +++ + + + VL R++ + C P+++T+ +I
Sbjct: 255 ELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTSVISG 314
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
Y K + V+ ++ P + T+N +I YGKA G A V+Q+M + P
Sbjct: 315 YCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPD 374
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
+T+ +I Y C + A +I+ E+++ T ++ +C EA L F
Sbjct: 375 VVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEA-LHFL 433
Query: 420 NSHNM--GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
NM + P + Y + K + +L ME+ G P+K
Sbjct: 434 KKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDK 481
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 125/330 (37%), Gaps = 41/330 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRN-SGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
Y +I++M + G+ A+ LF +M + SG P NA + L A L A
Sbjct: 130 YRYVISLMCQSGRHTDALQLFDQMTDQSGYFP-----NARFLSFLSGSCAAAGLLDAAAA 184
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE-LHESILAPDIYTYNGVMDAY 265
C YN L+ V ALF+ + + +PD++++N V+
Sbjct: 185 LLSKASQFGCSIEAYAYNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGV 244
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G +++ ++ RM C PD +T N+L++ + + K +V +
Sbjct: 245 CKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLR----------- 293
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
RLQ + P+ +TY +I+ Y + A ++++
Sbjct: 294 -------------RLQRDGVCM----------PNVVTYTSVISGYCKAGRMEDAMAVYND 330
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ +G V T N ++ Y G A +++ PD T+ L Y +
Sbjct: 331 MVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVVTFSSLIDGYCRCGQ 390
Query: 446 KELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ K+ M Q I PN F + TF
Sbjct: 391 LDDAMKIWTEMAQYHIQPNAHTFCIIIHTF 420
>gi|125563733|gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
Length = 618
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 134/303 (44%), Gaps = 10/303 (3%)
Query: 165 MW-LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
+W LF EM G P YN LI A H D +AKA + +M R PN+VTY
Sbjct: 157 VWELFDEMLGRGMVPSVVTYNTLINACRHQGD----VAKAWEVWDQMVA-RRIDPNVVTY 211
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
++ A + + LF E+ E+ + P++YTYN +M ++ K IK +
Sbjct: 212 TTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLK 271
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
P+ + F LID K + + +F + + PT+P +NS+I ++ +
Sbjct: 272 CGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQE 331
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAM 401
A FQ++ + P + C I + G CD + A + + + G + + N +
Sbjct: 332 ALAFFQEIIRKELRPD--EFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVL 389
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
++ YC +G EA + +GV P+ TY L ++K E+ + M G+
Sbjct: 390 IDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGV 449
Query: 462 VPN 464
PN
Sbjct: 450 EPN 452
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 127/299 (42%), Gaps = 9/299 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I + ++ A LF EM+ +G RP+ YNAL+++H RD K AL ++
Sbjct: 211 YTTMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHF-KRDNIK---HALVFY 266
Query: 208 QKMKGMERCK--PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+ +C PN V + L+ +A + + +F ++ +AP + YN ++
Sbjct: 267 YDLL---KCGLVPNDVIFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGA 323
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
++G +E + + + +PD T ++++ + + + S
Sbjct: 324 FRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNA 383
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
+N +I Y K+ +A +M+ + P+ +TY +I + + A I+ E
Sbjct: 384 AAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTE 443
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ G + V T A++ + NG A L + G+ ++ T +L + N
Sbjct: 444 MVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCREN 502
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/263 (19%), Positives = 116/263 (44%), Gaps = 4/263 (1%)
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+AL F +++ + P + N +L +A + +V LF E+ + P + TYN +
Sbjct: 124 EALSVFGRLREL----PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTL 179
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
++A G + + V +M + + P+++T+ +I + + E +F + +
Sbjct: 180 INACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEMKEAGM 239
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
+P L T+N+++ ++ K A + + P+ + + +I + ++ A+
Sbjct: 240 RPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRITEAKN 299
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
IF ++ + V N+++ +G EA F+ + PD T ++ +
Sbjct: 300 IFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLC 359
Query: 442 KANMKELVQKLLKRMEQNGIVPN 464
++ + L+ M+Q+GI N
Sbjct: 360 DGGQMQVATRFLEVMQQSGIALN 382
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 138/327 (42%), Gaps = 15/327 (4%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
I++ LI + K + A +F +M P VYN+LI H ++ +AL +
Sbjct: 280 IFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLI----HGAFRSGYAQEALAF 335
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
FQ++ E +P+ T +I++R + + + +S +A + YN ++D Y
Sbjct: 336 FQEIIRKE-LRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYC 394
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K+G + E +RM +P+++T++ LID + K + ++ ++ +P +
Sbjct: 395 KSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVV 454
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFD 384
T+ ++I + K A ++ ++M + IT ++ G C + V A
Sbjct: 455 TYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVD--GLCRENRVQDAVRFIM 512
Query: 385 ELSKLGKDMKVSTLN------AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
E S K K ++ ++ ++G EA F + G+ PD TY L+ +
Sbjct: 513 EYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIR 572
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNK 465
L M + G+ P K
Sbjct: 573 GLCMLGYVLNAMMLYADMVKVGVKPTK 599
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 101/236 (42%), Gaps = 7/236 (2%)
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
+L+ A +Q D+ ++F L E P + N ++D K M+ + + M
Sbjct: 110 GVLVIALSQMALPDEALSVFGRLRE---LPALPACNAILDGLVKAHMLARVWELFDEMLG 166
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
P ++T+N LI++ + K +V+ ++ + P + T+ +MI + G
Sbjct: 167 RGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGD 226
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
AE +F +M P+ TY +++ + DN+ A + +L K G +++
Sbjct: 227 AEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLID 286
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYK-LLYKAYTKANMKE---LVQKLLKR 455
C TEA +F + V P Y L++ A+ +E Q+++++
Sbjct: 287 GLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRK 342
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 144/319 (45%), Gaps = 5/319 (1%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
R+ D Y ++ + K + A+ EM G +PD +YN +++ L +K +
Sbjct: 108 RYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSG-LCQEEKVE 166
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
+A F+KM +R PN+VTYN L+ +A ++ LFKE+ P +Y
Sbjct: 167 ---EARLLFEKMV-KQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSY 222
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N ++D + K + + V +M + C P+++T+ LID K +V ++
Sbjct: 223 NTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVK 282
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
P + T++ +I + K R +A + ++M P+ +TY ++ D +
Sbjct: 283 KGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLED 342
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A ++F +++ V T N +L A C + A L+ G PD+ TY L
Sbjct: 343 AFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAW 402
Query: 439 AYTKANMKELVQKLLKRME 457
T+A Q+L+++M+
Sbjct: 403 GLTRAGKVHEAQELMEKMK 421
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 152/349 (43%), Gaps = 11/349 (3%)
Query: 117 EELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGC 176
+ K+ + Q EV++ M + + + +G Y LI+ + K G A L MR
Sbjct: 18 DGFAKAGRLEQVKEVYQGMVEAGYTLRASG-YGILISCLCKVGNFDEAYKLLHTMRLKRF 76
Query: 177 RPDPSVYNALIT--AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
+ Y+ +I L+ ++A+ L + + + P+ +TY ++ + +
Sbjct: 77 KRKAIAYSTIINWLCKLNRVEEARELIEKMARYAP--------PDALTYGPIVERLCKTK 128
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+D A +E+ + PD + YN V+ + ++E + +M + P+++T+N
Sbjct: 129 RIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYN 188
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
LI+ K + ++FK + PT ++N++I + K + A+ VF KM
Sbjct: 189 TLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRS 248
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P+ +TY +I V A E+ D + K G V+T + +++ +C EA
Sbjct: 249 NCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEA 308
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
L E G+ P TY +L + +A+ E KL + M Q P
Sbjct: 309 HKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHP 357
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 146/350 (41%), Gaps = 16/350 (4%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
++G D+ + L R + +R IA YS +I + K + A L +M
Sbjct: 57 KVGNFDEAYKLLHTMRLKRFKRKAIA----YSTIINWLCKLNRVEEARELIEKMARYA-P 111
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARN 235
PD Y ++ T K + AL ++M +G+ KP+ YN +L Q
Sbjct: 112 PDALTYGPIVERLCKT----KRIDDALATVEEMATRGI---KPDAFIYNFVLSGLCQEEK 164
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
V++ LF+++ + + P++ TYN +++ K I+ + M P +++N
Sbjct: 165 VEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNT 224
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK-ARLQGKAEYVFQKMTAM 354
LID + K++ + VF ++ S P + T+ ++I K ++Q AE V M
Sbjct: 225 LIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAE-VLDGMVKK 283
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
TP+ TY C+I + V A ++ +++ G V T N +L + C +A
Sbjct: 284 GVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDA 343
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
LF P TY L +A + +L M G P+
Sbjct: 344 FKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPD 393
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 107/229 (46%), Gaps = 6/229 (2%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E+F+ M + Y+ Y+ LI KK A +F +M S C P+ Y LI
Sbjct: 205 ELFKEMA-GKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDG 263
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
L K +A A+ L K KG+ PN+ TY+ L+ + R VD+ + L +++
Sbjct: 264 -LSKSGKVQAAAEVLDGMVK-KGV---TPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQ 318
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+AP + TYN ++++ + +++ + M +C P ++T+N L+ + + D
Sbjct: 319 GIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGA 378
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
+++ ++ P T++++ +A +A+ + +KM K P
Sbjct: 379 HRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/289 (18%), Positives = 108/289 (37%), Gaps = 38/289 (13%)
Query: 212 GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMI 271
+ R P T+N + A+A ++QV +++ + E+ Y ++ K G
Sbjct: 2 ALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNF 61
Query: 272 KEMESVLSRMKSNQ---------------CK-------------------PDIITFNLLI 297
E +L M+ + CK PD +T+ ++
Sbjct: 62 DEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIV 121
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+ K + D + + KP +N ++ + +A +F+KM +
Sbjct: 122 ERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRIN 181
Query: 358 PSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
P+ +TY +I G C + A E+F E++ G + N +++ +C A
Sbjct: 182 PNVVTYNTLIN--GLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+F+ P+ TY L +K+ + ++L M + G+ PN
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPN 288
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 87/223 (39%), Gaps = 1/223 (0%)
Query: 253 PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
P T+N V D + K G +++++ V M + +LI K FD+ ++
Sbjct: 8 PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGY 372
++ + K ++++I K +A + +KM A P +TY I+
Sbjct: 68 LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGPIVERLCK 126
Query: 373 CDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
+ A +E++ G N +L C EA LLFE + P+ T
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVT 186
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
Y L KA E +L K M G VP + + ++ F
Sbjct: 187 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGF 229
>gi|255580475|ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529358|gb|EEF31324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 156/341 (45%), Gaps = 7/341 (2%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L F+W +KQ+ ++ +T Y+ LI +GK Q + L ++M+ G + ALI+
Sbjct: 131 LSFFKWAEKQKGFMYNTESYNALIDSLGKIKQFNMIWNLVNDMKRKGVLTKETF--ALIS 188
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
K K +A+ F+KM+ K +N LL ++R V +F ++
Sbjct: 189 RRYARSGKVK---EAMNTFEKMEKFG-LKIESTDFNRLLDTLIKSRQVLSAQNVFDKMKI 244
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
PDI +Y +++ +G+ + +++ V MK +PD++T+ +LI++Y K + +D
Sbjct: 245 RRFVPDIKSYTILLEGWGQEKNLLKLDEVYREMKDEGFEPDVVTYGILINAYCKVRKYDD 304
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
++F+ + +P+ F ++I G R +A F++ A + P TY ++
Sbjct: 305 AIELFREMESKNCQPSPHIFCTLINGLGSVRRLSEALEFFRRSKASGFAPETPTYNAVVG 364
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN-SHNMGVT 427
Y + + A + DE+ K G T + +L TEA +FE S
Sbjct: 365 AYCWSMRIDDAYRMVDEMRKSGVGPNSRTYDIILHHLIKAEKTTEAFSVFEKMSSEEECE 424
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
P STY ++ + + + E K+ RM+ G+ P F
Sbjct: 425 PTVSTYDIIVRMFCNMDKVESAIKVWDRMKAKGVHPGMHMF 465
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 116/279 (41%), Gaps = 38/279 (13%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L E G+ L+ EV+R M K + D Y LI K + A+ LF EM +
Sbjct: 256 ILLEGWGQEKNLLKLDEVYREM-KDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMES 314
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKAL-----AKALGY---------------------- 206
C+P P ++ LI R ++AL +KA G+
Sbjct: 315 KNCQPSPHIFCTLINGLGSVRRLSEALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDD 374
Query: 207 -FQKMKGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELH-ESILAPDIYTYNGVM 262
++ + M + PN TY+I+L +A + ++F+++ E P + TY+ ++
Sbjct: 375 AYRMVDEMRKSGVGPNSRTYDIILHHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIV 434
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+ ++ V RMK+ P + F++LI+S D + F+ ++ +
Sbjct: 435 RMFCNMDKVESAIKVWDRMKAKGVHPGMHMFSILINSLCHENKLDIACKYFQEMLDVGIR 494
Query: 323 PTLPTFNSM---IINYGKARLQGKAEYVFQKMTAMKYTP 358
P F+ + +I G+ + + QK+ ++ TP
Sbjct: 495 PPAALFSHLKQALIEDGR---KDTVVLLAQKIDKLRKTP 530
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 81/204 (39%), Gaps = 18/204 (8%)
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
++N LIDS GK + F+ + + M K T TF + Y ++ +A F+KM
Sbjct: 149 SYNALIDSLGKIKQFNMIWNLVND-MKRKGVLTKETFALISRRYARSGKVKEAMNTFEKM 207
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS--KLGKDMKVSTLNAMLEAYCMNG 409
+ ++ V A+ +FD++ + D+K T+ +LE +
Sbjct: 208 EKFGLKIESTDFNRLLDTLIKSRQVLSAQNVFDKMKIRRFVPDIKSYTI--LLEGWGQEK 265
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFL 469
+ D ++ + G PD TY +L AY K + +L + ME P+ F
Sbjct: 266 NLLKLDEVYREMKDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNCQPSPHIFC 325
Query: 470 -------------EALETFSSSLA 480
EALE F S A
Sbjct: 326 TLINGLGSVRRLSEALEFFRRSKA 349
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 168/400 (42%), Gaps = 48/400 (12%)
Query: 107 VRSEHCF-------LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG 159
+R + CF +L L +S + L+ L +F M ++R + Y+ LI + K+G
Sbjct: 281 MREDGCFPTVRTYTVLVCALCESGRELEALSLFGEM-RERGCEPNVYTYTVLIDYLCKEG 339
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
+ A+ + +EM G P +NALI ++ K + A+G M+ + C PN
Sbjct: 340 RMDEALKMLNEMVEKGVAPSVVPFNALIGSYC----KRGMMEDAVGVLGLMESKKVC-PN 394
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN---------GVMDAYGK--- 267
+ TYN L+ + +++D+ AL ++ ES L+PD+ TYN GV+D+ +
Sbjct: 395 VRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFR 454
Query: 268 -----------------------NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
G + E +L +K K + + LID Y K
Sbjct: 455 LMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAG 514
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
+ +FK ++ + P TFN MI K A + + M P+ TY
Sbjct: 515 KIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYN 574
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
++ + RA EI + L G V T A ++AYC G EA+ + N
Sbjct: 575 ILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNE 634
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
GV DS Y LL AY + + +L+RM G P+
Sbjct: 635 GVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPS 674
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 147/317 (46%), Gaps = 7/317 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + + G+ A+ ++ MR GC P Y L+ A + + +AL+ F
Sbjct: 258 YTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALS----LF 313
Query: 208 QKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+M+ ER C+PN+ TY +L+ + +D+ + E+ E +AP + +N ++ +Y
Sbjct: 314 GEMR--ERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYC 371
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K GM+++ VL M+S + P++ T+N LI + + ++ D+ + ++ SK P +
Sbjct: 372 KRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVV 431
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T+N++I + + A +F+ M ++P T+ + V A +I + L
Sbjct: 432 TYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESL 491
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
+ A+++ YC G A LF+ P+S T+ ++ K
Sbjct: 492 KEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKV 551
Query: 447 ELVQKLLKRMEQNGIVP 463
+ L++ M + + P
Sbjct: 552 QDAMLLVEDMAKFDVKP 568
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 128/284 (45%), Gaps = 7/284 (2%)
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKEL 246
T +H +A L +AL ++ +M+ + C P + TY +L+ A C R ++ + +LF E+
Sbjct: 259 TNLIHGLCEAGKLHEALEFWARMRE-DGCFPTVRTYTVLVCALCESGRELEAL-SLFGEM 316
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
E P++YTY ++D K G + E +L+ M P ++ FN LI SY KR
Sbjct: 317 RERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMM 376
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ V + K P + T+N +I + + + +A + KM K +P +TY +
Sbjct: 377 EDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTL 436
Query: 367 ITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
I +G C+ V A +F + + G T NA + C G EA + E+
Sbjct: 437 I--HGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEK 494
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
V + Y L Y KA E L KRM +PN F
Sbjct: 495 HVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITF 538
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 166/401 (41%), Gaps = 33/401 (8%)
Query: 96 LVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQ----RWYIADTG--IYS 149
L+R +N +H L ++ L CL F + + + + D G ++
Sbjct: 128 LLRRMNTAAAAADHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFP 187
Query: 150 KLIAV------MGKKGQTRLAMWLFSEMRNSGCRPDPSV--YNALITAHLHTRDKAKALA 201
LI + K G +A F +R C P P + Y +L+ + D +
Sbjct: 188 NLITLNTMLNSYCKLGNMAVARLFF--VRILRCEPGPDLFTYTSLVLGYCRNDD----VE 241
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+A G F M + N V+Y L+ +A + + + + E P + TY +
Sbjct: 242 RACGVFCVMP-----RRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVL 296
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ A ++G E S+ M+ C+P++ T+ +LID K D+ ++ ++
Sbjct: 297 VCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGV 356
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRA 379
P++ FN++I +Y K + A V M + K P+ TY +I G+C ++ RA
Sbjct: 357 APSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELIC--GFCRGKSMDRA 414
Query: 380 REIFDEL--SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
+ +++ SKL D V T N ++ C G+ A LF G +PD T+
Sbjct: 415 MALLNKMVESKLSPD--VVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFM 472
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ ++L+ +++ + N+ + ++ + +
Sbjct: 473 VCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKA 513
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 148/340 (43%), Gaps = 22/340 (6%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
+FR M + + D ++ + + + G+ A + ++ + + Y ALI +
Sbjct: 452 LFRLMIRD-GFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGY 510
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
KA + A F++M E C PN +T+N+++ + V L +++ +
Sbjct: 511 C----KAGKIEHAASLFKRMLA-EECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFD 565
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
+ P ++TYN +++ K +L+R+ S+ +P+++T+ I +Y + ++ E
Sbjct: 566 VKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAE 625
Query: 311 QVFKSLMHSKEKPTLPTF--NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
++ + E L +F N +I YG L A V ++M PS++TY ++
Sbjct: 626 EMVIKI--KNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILM- 682
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTL---NAMLEAYCMNGLPTEADLLFENSHNMG 425
++ + + + +G D+ ++ + N + + G+ T +LFE G
Sbjct: 683 -----KHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITT---VLFEKMAECG 734
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
P+ +TY L K + L M + GI P++
Sbjct: 735 CVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSE 774
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/413 (20%), Positives = 156/413 (37%), Gaps = 76/413 (18%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM 171
C +G++ + L+ L K++ A+ Y+ LI K G+ A LF M
Sbjct: 474 CLCRMGRVGEAHQILESL-------KEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRM 526
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
C P+ +N +I R + K + A+ + M + KP + TYNIL+
Sbjct: 527 LAEECLPNSITFNVMIDG---LRKEGK-VQDAMLLVEDMAKFD-VKPTLHTYNILVEEVL 581
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ + D+ N + L S P++ TY + AY G ++E E ++ ++K+ D
Sbjct: 582 KEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSF 641
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI------------------- 332
+NLLI++YG D V + + + +P+ T++ ++
Sbjct: 642 IYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLD 701
Query: 333 -----INYGKARLQGKAEY-----VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
I+ + K ++ +F+KM P+ TY +I ++ A +
Sbjct: 702 VSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSL 761
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA----DLLFENSH---------------- 422
+ + + G N++L + C G+ EA D + E SH
Sbjct: 762 YHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFE 821
Query: 423 ---------------NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
G D +K+L K + +LL ME+NG
Sbjct: 822 QMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNG 874
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 115/292 (39%), Gaps = 34/292 (11%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
Y + Y+ I +G+ A + +++N G D +YN LI A+ L
Sbjct: 601 YQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAY----GCMGLL 656
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARN------------------VDQVN-- 240
A G ++M G C+P+ +TY+IL++ ++ VD +
Sbjct: 657 DSAFGVLRRMFG-TGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIW 715
Query: 241 ---------ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
LF+++ E P++ TY+ +++ K G + S+ M+ P I
Sbjct: 716 SKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEI 775
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
N L+ S K F + + S+M L ++ +I + + KAE VF +
Sbjct: 776 IHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSL 835
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
Y + ++ +I V + E+ + + K G + T + +++
Sbjct: 836 LRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQ 887
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 73/167 (43%), Gaps = 17/167 (10%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ + YSKLI + K G+ +A L+ MR G P ++N+L+++
Sbjct: 736 VPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSS-----------C 784
Query: 202 KALGYFQK----MKGMERCK--PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
LG F + + M C ++ +Y +L+ + N ++ A+F L D
Sbjct: 785 CKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDE 844
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
+ ++D K G + + +L+ M+ N C+ T+++L+ +
Sbjct: 845 VAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLMQELNR 891
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 142/307 (46%), Gaps = 5/307 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS LI + GQ LA L ++M GC P+ ++L+ AL +
Sbjct: 283 YSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDM---WN 339
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
Q ++G +PN+V YN L++ N+D+ ++F + E +P+I TY +++ + K
Sbjct: 340 QMIRGFGL-QPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTK 398
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G ++ + ++M ++ C P+++ + ++++ + F + E + + + P++PT
Sbjct: 399 RGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPT 458
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAM-KYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
FN+ I A AE VF++M + P+ +TY ++ + + A + E+
Sbjct: 459 FNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREI 518
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
G + ST N +L C GLP A L G +PD T ++ AY K
Sbjct: 519 FMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKA 578
Query: 447 ELVQKLL 453
E ++L
Sbjct: 579 ERAVQML 585
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 146/331 (44%), Gaps = 16/331 (4%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA- 189
V+R M K+ + + Y+ L+ + K + A L EM N GC P+ Y +I++
Sbjct: 167 VYRDM-KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSM 225
Query: 190 -HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
+ + + LA ER +P + YN L+ + R+ L E+ E
Sbjct: 226 CEVGMVKEGRQLA------------ERFEPVVSVYNALINGLCKERDYKGGVELMSEMVE 273
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS-YGKRQAFD 307
++P++ +Y+ +++ +G I+ S+L++M C P+I T + L+ + + FD
Sbjct: 274 KGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFD 333
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
++ + + +P + +N+++ + KA VF M + +P+ TY +I
Sbjct: 334 ALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLI 393
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
+ ++ A I++++ G V +M+EA C + EA+ L E
Sbjct: 394 NGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCA 453
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
P T+ K A + +K+ ++MEQ
Sbjct: 454 PSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQ 484
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/351 (19%), Positives = 150/351 (42%), Gaps = 22/351 (6%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
+ + M+ Q ++ ++ ++ +I+V + G A+ +F ++ GC P +YN
Sbjct: 97 LLQQMKLQGFHCSED-LFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYN------ 149
Query: 191 LHTRDKAKALAKALGYFQKMKGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
H D + + + M+R +PN+ TYN+LL+A + VD L E+
Sbjct: 150 -HVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSN 208
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
P+ +Y V+ + + GM+KE + R + P + +N LI+ K + +
Sbjct: 209 KGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFE-----PVVSVYNALINGLCKERDYKG 263
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM---KYTPSFITYEC 365
++ ++ P + +++++I + G+ E F + M P+ T
Sbjct: 264 GVELMSEMVEKGISPNVISYSTLINELSNS---GQIELAFSLLAQMLKRGCHPNIHTLSS 320
Query: 366 IITMYGYCDNVSRAREIFDELSK-LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
++ A ++++++ + G V N +++ +C +G +A +F + +
Sbjct: 321 LVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEI 380
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
G +P+ TY L +TK E + +M +G PN + +E
Sbjct: 381 GCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEAL 431
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 121/295 (41%), Gaps = 18/295 (6%)
Query: 94 EPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIA 153
P + TL+ VK CF+ D W Q + R Q +A Y+ L+
Sbjct: 312 HPNIHTLSSLVK-----GCFVRGTTFDALDMWNQ---MIRGFGLQPNVVA----YNTLVQ 359
Query: 154 VMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGM 213
G A+ +F M GC P+ Y +LI K +L A+ + KM
Sbjct: 360 GFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGF----TKRGSLEGAVYIWNKML-T 414
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
C PN+V Y ++ A + + +L + + + AP + T+N + G +
Sbjct: 415 SGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDW 474
Query: 274 MESVLSRMKSN-QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
E V +M+ +C P+I+T+N L+D K ++ + + + + + T+N+++
Sbjct: 475 AEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLL 534
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
A L G A + KM +P IT II Y RA ++ D +S
Sbjct: 535 HGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVS 589
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/340 (19%), Positives = 148/340 (43%), Gaps = 17/340 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA-KALGY 206
+ +I + GQ +L +M+ G ++ ++I+ + + LA +A+
Sbjct: 78 FEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVY-----RQVGLAERAVEM 132
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F ++K C P++ YN +L + + +++++ P+++TYN ++ A
Sbjct: 133 FYRIKEFG-CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALC 191
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
KN + + +L M + C P+ +++ +I S + + Q + + +P +
Sbjct: 192 KNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQ-----LAERFEPVVS 246
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
+N++I K R + +M +P+ I+Y +I + A + ++
Sbjct: 247 VYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQM 306
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEA-DLLFENSHNMGVTPDSSTYKLLYKAY-TKAN 444
K G + TL+++++ + G +A D+ + G+ P+ Y L + + + N
Sbjct: 307 LKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGN 366
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETFS--SSLAGS 482
+ + V L ME+ G PN R + + F+ SL G+
Sbjct: 367 IDKAVSVFL-HMEEIGCSPNIRTYGSLINGFTKRGSLEGA 405
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 108/244 (44%), Gaps = 33/244 (13%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL-HTRDK---------- 196
Y LI K+G A++++++M SGC P+ VY +++ A H++ K
Sbjct: 389 YGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMS 448
Query: 197 --------------------AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
A L A F++M+ RC PNIVTYN LL A+A +
Sbjct: 449 KENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRI 508
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
++ L +E+ + TYN ++ G+ ++ +M N PD IT N++
Sbjct: 509 EEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMI 568
Query: 297 IDSYGKRQAFDKMEQVFK--SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
I +Y K+ ++ Q+ S K +P + ++ ++I ++ + +F++M +
Sbjct: 569 ILAYCKQGKAERAVQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERMISE 628
Query: 355 KYTP 358
+ P
Sbjct: 629 RIIP 632
>gi|410110105|gb|AFV61132.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
aristata]
Length = 382
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 141/294 (47%), Gaps = 6/294 (2%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
D +YS LI + K A+ +FS ++ SG PD YNA+I KAK +
Sbjct: 3 GDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVF----GKAKLFRE 58
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A +MK PN +Y+ LL + + + ++F E+ E D+ T N ++
Sbjct: 59 ARSLIGEMKA-AGVMPNTXSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMI 117
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D YG+ GM KE + + M+ +P+++++N L+ YG + F + +F+ + +
Sbjct: 118 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 177
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
+ T+NSM++ YGK KA + Q+M + P+ ITY II+++G + RA +
Sbjct: 178 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAML 237
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD-LLFENSHNMGVTPDSSTYKL 435
F +L G ++ M+ AY GL A LL E + D++ + L
Sbjct: 238 FQKLRSSGIEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL 291
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 130/263 (49%), Gaps = 1/263 (0%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+KA+ F ++K P++V YN ++ +A+ + +L E+ + + P+ +Y+
Sbjct: 22 SKAISIFSRLK-RSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYST 80
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ Y +N E SV S M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 81 LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 140
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P + ++N+++ YG A L G+A ++F+ M + +TY ++ +YG +A
Sbjct: 141 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 200
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ E+ G + T + ++ + G A +LF+ + G+ D ++ + AY
Sbjct: 201 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTMIVAY 260
Query: 441 TKANMKELVQKLLKRMEQNGIVP 463
+A + ++LL +++ +P
Sbjct: 261 ERAGLVAHAKRLLHELKRPDNIP 283
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 147/331 (44%), Gaps = 15/331 (4%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L EM+ +G P+ Y+ L+T ++
Sbjct: 32 KRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLLTMYVEN--- 88
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
K +AL F +M+ + +C ++ T NI++ Q + + LF + + + P++
Sbjct: 89 -KKFLEALSVFSEMREI-KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVV 146
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+YN ++ YG + E + M+ + +++T+N ++ YGK +K + + +
Sbjct: 147 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEM 206
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P T++++I +GK +A +FQK+ + I ++ +I Y V
Sbjct: 207 QSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTMIVAYERAGLV 266
Query: 377 SRAREIFDELSK---LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ A+ + EL + + +D + L G EA +F + + G D + +
Sbjct: 267 AHAKRLLHELKRPDNIPRDTAIHILAGA-------GRIEEATYVFRQAIDAGEVKDITVF 319
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ + +K V ++ +M G P+
Sbjct: 320 ERMIHLLSKYKKYSNVVEVFDKMRGLGYFPD 350
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 118/250 (47%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
++V Y+ L+ + + + ++F L S PD+ YN +++ +GK + +E S++
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
MK+ P+ +++ L+ Y + + F + VF + K L T N MI YG+
Sbjct: 64 GEMKAAGVMPNTXSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
+ +A+ +F M M P+ ++Y ++ +YG + A +F + + + V T
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 183
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N+M+ Y +A+ L + + G+ P+S TY + + K + L +++
Sbjct: 184 NSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 243
Query: 459 NGIVPNKRFF 468
+GI ++ F
Sbjct: 244 SGIEIDQILF 253
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 132/286 (46%), Gaps = 12/286 (4%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
++ K+L+ L VF M++ + + D + +I V G+ G + A LF MR G P+
Sbjct: 87 ENKKFLEALSVFSEMREIKCLL-DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 145
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
YN L L A+ +A+ F+ M+ + + N+VTYN ++ + ++ N
Sbjct: 146 VSYNTL----LRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVTYNSMMMIYGKTLEHEKAN 200
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
L +E+ + P+ TY+ ++ +GK G + + +++S+ + D I F +I +Y
Sbjct: 201 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTMIVAY 260
Query: 301 GKRQAFDKMEQVFKSLMHSKEKP-TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
+ K L+H ++P +P ++ I G R++ +A YVF++
Sbjct: 261 ERAGLVAHA----KRLLHELKRPDNIPRDTAIHILAGAGRIE-EATYVFRQAIDAGEVKD 315
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+E +I + S E+FD++ LG + +L AY
Sbjct: 316 ITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAY 361
>gi|302757495|ref|XP_002962171.1| hypothetical protein SELMODRAFT_77736 [Selaginella moellendorffii]
gi|300170830|gb|EFJ37431.1| hypothetical protein SELMODRAFT_77736 [Selaginella moellendorffii]
Length = 731
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 166/389 (42%), Gaps = 42/389 (10%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGI------------------------------- 147
L + W + +EVF W Q+Q Y A+ +
Sbjct: 91 LSEQRDWRKAIEVFSWFQRQDNYEANVFLYNILLRTLGRAAKWELLQKYWSEMLGERVPP 150
Query: 148 ----YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
YS L+ V G+ G A+ + M SG PD + + + D +A
Sbjct: 151 TIFTYSILVDVHGRAGMKDEAIRFYRHMIESGVEPDEVMVSTYMNLQRRFGDLEEAEKAF 210
Query: 204 LGYFQK--MKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
G F + + G + N T+N ++ + + + +F E+ ++ + T+N +
Sbjct: 211 WGLFSENLVDGTTKRPENPETFNTMISFYGEHAKFAEASKVFAEMMKAGVELTTVTFNAM 270
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQ-CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
+ YGK G +E E ++++MK + C PD+ T+N LI+ Y K + + + + S
Sbjct: 271 IHVYGKAGRTREAELLVTKMKQRKDCCPDVATYNSLIEMYVKNDKLELVSGCLERMRDSG 330
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P TF ++I Y + KAE + Q+M + Y +I MY +VS+A
Sbjct: 331 VSPDQVTFRTLISAYAANNVVWKAEALVQEMEGSGFFIDQAMYTVMIAMYVRARDVSKAE 390
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV-TPDSSTYKLLYKA 439
+F L G ++VST +++ Y + +A +FE + N G+ TP S Y ++ KA
Sbjct: 391 SVFRFLHSRG-GLEVSTYVGVMDVYAEHKCLDQAREVFELAKNAGLKTP--SLYNVMMKA 447
Query: 440 YTKANMKELVQKLLKRMEQNGIVPNKRFF 468
Y + + + ME++G PN+ F
Sbjct: 448 YGACDRFTDAVTVFEAMEKDGASPNEASF 476
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 144/323 (44%), Gaps = 9/323 (2%)
Query: 135 MQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR 194
M++++ D Y+ LI + K + L MR+SG PD + LI+A+
Sbjct: 290 MKQRKDCCPDVATYNSLIEMYVKNDKLELVSGCLERMRDSGVSPDQVTFRTLISAYAAN- 348
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
+ KA Q+M+G + Y +++ +AR+V + ++F+ LH S +
Sbjct: 349 ---NVVWKAEALVQEMEG-SGFFIDQAMYTVMIAMYVRARDVSKAESVFRFLH-SRGGLE 403
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK-PDIITFNLLIDSYGKRQAFDKMEQVF 313
+ TY GVMD Y ++ + + V K+ K P + +N+++ +YG F VF
Sbjct: 404 VSTYVGVMDVYAEHKCLDQAREVFELAKNAGLKTPSL--YNVMMKAYGACDRFTDAVTVF 461
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
+++ P +FNS+I K RL + V + A + PS + +++ YG
Sbjct: 462 EAMEKDGASPNEASFNSLIQLLCKGRLLEILQRVLVLVKAAGFKPSLASCSSVVSFYGDM 521
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
V A +F E+ G + V +A+L AY G EA ++ G PD+ Y
Sbjct: 522 GRVREAERVFKEMLASGVEADVICYSALLNAYAEAGFAREAQQTLDSLKAAGFVPDTIVY 581
Query: 434 KLLYKAYTKANMKELVQKLLKRM 456
+ K Y+ + +K+ + +
Sbjct: 582 TSMMKLYSNLGLTAEAEKIYEEI 604
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 159/367 (43%), Gaps = 45/367 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ +I+ G+ + A +F+EM +G +NA+I H KA +A
Sbjct: 232 FNTMISFYGEHAKFAEASKVFAEMMKAGVELTTVTFNAMI----HVYGKAGRTREAELLV 287
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
KMK + C P++ TYN L+ + ++ V+ + + +S ++PD T+ ++ AY
Sbjct: 288 TKMKQRKDCCPDVATYNSLIEMYVKNDKLELVSGCLERMRDSGVSPDQVTFRTLISAYAA 347
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
N ++ + E+++ M+ + D + ++I Y + + K E VF+ +HS+ + T
Sbjct: 348 NNVVWKAEALVQEMEGSGFFIDQAMYTVMIAMYVRARDVSKAESVFR-FLHSRGGLEVST 406
Query: 328 FNSMIINYGKARLQGKAEYVFQ--KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
+ ++ Y + + +A VF+ K +K TPS Y ++ YG CD + A +F+
Sbjct: 407 YVGVMDVYAEHKCLDQAREVFELAKNAGLK-TPSL--YNVMMKAYGACDRFTDAVTVFEA 463
Query: 386 LSKLGKDMKVSTLNAMLEAYCMN-----------------------------------GL 410
+ K G ++ N++++ C G
Sbjct: 464 MEKDGASPNEASFNSLIQLLCKGRLLEILQRVLVLVKAAGFKPSLASCSSVVSFYGDMGR 523
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
EA+ +F+ GV D Y L AY +A Q+ L ++ G VP+ +
Sbjct: 524 VREAERVFKEMLASGVEADVICYSALLNAYAEAGFAREAQQTLDSLKAAGFVPDTIVYTS 583
Query: 471 ALETFSS 477
++ +S+
Sbjct: 584 MMKLYSN 590
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 148/355 (41%), Gaps = 34/355 (9%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKA---- 199
D + LI+ A L EM SG D ++Y +I ++ RD +KA
Sbjct: 334 DQVTFRTLISAYAANNVVWKAEALVQEMEGSGFFIDQAMYTVMIAMYVRARDVSKAESVF 393
Query: 200 --------------------------LAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
L +A F+ K P++ YN++++A
Sbjct: 394 RFLHSRGGLEVSTYVGVMDVYAEHKCLDQAREVFELAKNAGLKTPSL--YNVMMKAYGAC 451
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+F+ + + +P+ ++N ++ K +++ ++ VL +K+ KP + +
Sbjct: 452 DRFTDAVTVFEAMEKDGASPNEASFNSLIQLLCKGRLLEILQRVLVLVKAAGFKPSLASC 511
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+ ++ YG + E+VFK ++ S + + +++++ Y +A +A+ + A
Sbjct: 512 SSVVSFYGDMGRVREAERVFKEMLASGVEADVICYSALLNAYAEAGFAREAQQTLDSLKA 571
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
+ P I Y ++ +Y + A +I++E+S+L D V N ML Y +G+ TE
Sbjct: 572 AGFVPDTIVYTSMMKLYSNLGLTAEAEKIYEEISRLSPD--VFAANTMLNLYIKSGMFTE 629
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
A+ LF + ++ K Y +A E + + M + ++ + R F
Sbjct: 630 AEQLFRAMQRGKPGLNEVACTMMLKLYREAGKIEQGLDVARVMSRRFLITDARAF 684
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 109/235 (46%), Gaps = 12/235 (5%)
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
+++ YN ++ G+ + ++ S M + P I T+++L+D +G+ D+ + +
Sbjct: 116 NVFLYNILLRTLGRAAKWELLQKYWSEMLGERVPPTIFTYSILVDVHGRAGMKDEAIRFY 175
Query: 314 KSLMHSKEKPT---LPTFNSMIINYGKARLQGKA------EYVFQKMTAMKYTPSFITYE 364
+ ++ S +P + T+ ++ +G KA E + T P T+
Sbjct: 176 RHMIESGVEPDEVMVSTYMNLQRRFGDLEEAEKAFWGLFSENLVDGTTKRPENPE--TFN 233
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN-SHN 423
+I+ YG + A ++F E+ K G ++ T NAM+ Y G EA+LL
Sbjct: 234 TMISFYGEHAKFAEASKVFAEMMKAGVELTTVTFNAMIHVYGKAGRTREAELLVTKMKQR 293
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
PD +TY L + Y K + ELV L+RM +G+ P++ F + ++++
Sbjct: 294 KDCCPDVATYNSLIEMYVKNDKLELVSGCLERMRDSGVSPDQVTFRTLISAYAAN 348
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 100/227 (44%), Gaps = 25/227 (11%)
Query: 149 SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT---RDKAKAL--AKA 203
S +++ G G+ R A +F EM SG D Y+AL+ A+ R+ + L KA
Sbjct: 512 SSVVSFYGDMGRVREAERVFKEMLASGVEADVICYSALLNAYAEAGFAREAQQTLDSLKA 571
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
G+ P+ + Y +++ + + +++E+ S L+PD++ N +++
Sbjct: 572 AGFV----------PDTIVYTSMMKLYSNLGLTAEAEKIYEEI--SRLSPDVFAANTMLN 619
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY---GK-RQAFDKMEQVFKSLMHS 319
Y K+GM E E + M+ + + + +++ Y GK Q D + + + +
Sbjct: 620 LYIKSGMFTEAEQLFRAMQRGKPGLNEVACTMMLKLYREAGKIEQGLDVARVMSRRFLIT 679
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ FN +I Y KA L +A ++M PS T+ C
Sbjct: 680 DAR----AFNGVIAMYVKAGLMREALEALKEMRRAGLVPSRSTFSCF 722
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 11/156 (7%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
++ DT +Y+ ++ + G T A ++ E+ R P V+ A +L+ +
Sbjct: 574 FVPDTIVYTSMMKLYSNLGLTAEAEKIYEEI----SRLSPDVFAANTMLNLYIKSGMFTE 629
Query: 201 AKALGYFQKMKGMERCKP--NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
A+ L + M+R KP N V ++L+ +A ++Q + + + L D +
Sbjct: 630 AEQL-----FRAMQRGKPGLNEVACTMMLKLYREAGKIEQGLDVARVMSRRFLITDARAF 684
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
NGV+ Y K G+++E L M+ P TF+
Sbjct: 685 NGVIAMYVKAGLMREALEALKEMRRAGLVPSRSTFS 720
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 144/334 (43%), Gaps = 11/334 (3%)
Query: 135 MQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR 194
M+ Q Y A IY +I + + Q A LF EM+ C+PD +YN+LI H H+R
Sbjct: 1 MKNQDNYCARNDIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLI--HAHSR 58
Query: 195 DKAKALAKALGYFQKMKGMERCK--PNIVTYNILLRACAQARNVDQVNALFKELHESILA 252
A M+ M R P TYN ++ AC A N + L K++ E+ +
Sbjct: 59 AGQWRWA-----INIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVG 113
Query: 253 PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
PD+ T+N V+ A + S MK D T N++I K + ++
Sbjct: 114 PDLVTHNIVLSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIEL 173
Query: 313 FKSLMHSKEK--PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
F S+ + K P + T+ S++ +Y + +F M A P+ + Y ++ Y
Sbjct: 174 FNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAY 233
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
A IF+ + K G + + ++L AY + P +A +F P+
Sbjct: 234 ASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNK 293
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+Y L AY A M + LL ME++GI P+
Sbjct: 294 VSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPD 327
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 148/331 (44%), Gaps = 40/331 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I G G + A+ L +M +G PD +N +++A ++ A+ +KA+ YF
Sbjct: 84 YNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSA---LKNGAQ-YSKAISYF 139
Query: 208 QKMKGME------------------------------------RCKPNIVTYNILLRACA 231
+ MKG +C P++VTY ++ +
Sbjct: 140 EIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYC 199
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
V+ A+F + + P+I YN ++ AY GM +E ++ + +K N +PDI+
Sbjct: 200 IYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIV 259
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
++ L+++YG+ +K +VF + + KP ++N++I YG A + +A + +M
Sbjct: 260 SYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEM 319
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P ++ ++ G C ++R I + G D+ N+ +++Y G
Sbjct: 320 EKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDY 379
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+A L+ + V PD+ TY +L +K
Sbjct: 380 EKALELYTSMRESNVKPDAVTYNILISGSSK 410
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 162/371 (43%), Gaps = 42/371 (11%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN--SGCRPDPSVYNALITAHLHTRDKAKAL 200
+DT + +I + K GQ A+ LF+ MR + C PD Y T+ +H+ +
Sbjct: 149 SDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTY----TSIMHSYCIYGQV 204
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
F M E KPNIV YN LL A A + A+F + ++ L PDI +Y
Sbjct: 205 ENCKAIFDLMVA-EGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTS 263
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
+++AYG++ ++ V ++MK N CKP+ +++N LID+YG + + +
Sbjct: 264 LLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDG 323
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P + + ++++ G+ R + E + + + + + Y I Y + +A
Sbjct: 324 IQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKAL 383
Query: 381 EIFDEL-------------------SKLGK------------DMKVST----LNAMLEAY 405
E++ + SKLGK D KVS+ ++++ +Y
Sbjct: 384 ELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSY 443
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
G +EA+ F + G PD TY L +AY + L K ME NGI P+
Sbjct: 444 IKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDA 503
Query: 466 RFFLEALETFS 476
+E F+
Sbjct: 504 IICSSLMEAFN 514
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 152/327 (46%), Gaps = 5/327 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ +G R A+ +F+ ++ +G RPD Y +L+ A+ ++ KA F
Sbjct: 226 YNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAY----GRSAQPEKAREVF 281
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
KMK CKPN V+YN L+ A A + + L E+ + + PD+ + + ++ A G+
Sbjct: 282 NKMK-KNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGR 340
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
I +E++L +S + + +N I SY ++K +++ S+ S KP T
Sbjct: 341 CRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVT 400
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N +I K ++ F+ M K + + Y +I Y +S A F +
Sbjct: 401 YNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGKLSEAESTFSSMK 460
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
K G V T +++AY G A LF+ G+ PD+ L +A+ K E
Sbjct: 461 KSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPE 520
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALET 474
V +L++ M++ I N++ + E + +
Sbjct: 521 RVLQLMEFMKKKSIPLNQKSYFEIIAS 547
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 126/279 (45%), Gaps = 3/279 (1%)
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+A G F +M+ RCKP+ YN L+ A ++A + +++ + + P TYN V
Sbjct: 29 QARGLFFEMQEW-RCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNV 87
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
++A G G K+ + +M N PD++T N+++ + + K F+ + +
Sbjct: 88 INACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGANV 147
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTA--MKYTPSFITYECIITMYGYCDNVSRA 379
T N +I K G+A +F M K P +TY I+ Y V
Sbjct: 148 TSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENC 207
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+ IFD + G + N++L AY G+ EA +F G+ PD +Y L A
Sbjct: 208 KAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNA 267
Query: 440 YTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
Y ++ E +++ +M++N PNK + ++ + S+
Sbjct: 268 YGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSA 306
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 101/227 (44%), Gaps = 11/227 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI+ K G+ ++ F +M +S VY++LI +++ K L++A
Sbjct: 397 DAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYI----KQGKLSEA 452
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F MK C P+++TY L++A + LFKE+ + + PD + +M+
Sbjct: 453 ESTFSSMK-KSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLME 511
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
A+ K G + + ++ MK + ++ +I S + + ++ + L S
Sbjct: 512 AFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYLDSSLSSI 571
Query: 324 TLPTFNSMIINYGKARLQGKAEY---VFQKMTAMKYTPSFITYECII 367
++ T N ++ GK GK E +F KM T TY ++
Sbjct: 572 SVGTLNHVLNFLGKC---GKTENMMKLFYKMVTSCSTVGLSTYAVVL 615
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 173/383 (45%), Gaps = 15/383 (3%)
Query: 104 VKVVRSEHCF-LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTR 162
V VV + H F +L KS + ++ M+ R+ D Y+ LI++ KKG
Sbjct: 191 VGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEME-SRFIFPDLFTYNTLISLYCKKGMHY 249
Query: 163 LAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVT 222
A+ + M G PD YN+LI + + +AL F+++ G PN VT
Sbjct: 250 EALGIQDRMERGGVSPDIVTYNSLIYGFC----REGRMREALRLFREING---ATPNHVT 302
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y L+ + ++++ L + + L P + TYN ++ + G IK+ +L+ M
Sbjct: 303 YTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMS 362
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR-LQ 341
+ +PD +T N LI++Y K +V K ++ + KP TF ++I + K +
Sbjct: 363 ERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVD 422
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
E++F+ + A ++PS+ TY ++ Y DN + DELS+ G + +S A+
Sbjct: 423 SAKEFLFEMLDA-GFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRAL 481
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ C A+ +F G+ DS Y L AY KA +L M++ +
Sbjct: 482 IRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRL 541
Query: 462 VPNKRFFLEALETFSSSLAGSQS 484
+ + + FS+S AG S
Sbjct: 542 MITLKIY----RCFSASYAGDGS 560
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 144/322 (44%), Gaps = 7/322 (2%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
+++ I S L+ T+ A+ +F MR G +P L L++ KA+
Sbjct: 125 SNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVL----LNSLAKARLTNM 180
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
++KM + PNI +N+L+ AC ++ +V++ L E+ + PD++TYN ++
Sbjct: 181 VWKVYKKMVRVG-VVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLI 239
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
Y K GM E + RM+ PDI+T+N LI + + + ++F+ + +
Sbjct: 240 SLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGAT 297
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P T+ ++I Y + +A + + M P +TY I+ + A +
Sbjct: 298 PNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRL 357
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+E+S+ + T N ++ AYC G A + + G+ PD T+K L + K
Sbjct: 358 LNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCK 417
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
+ + ++ L M G P+
Sbjct: 418 LHEVDSAKEFLFEMLDAGFSPS 439
>gi|125575133|gb|EAZ16417.1| hypothetical protein OsJ_31886 [Oryza sativa Japonica Group]
Length = 678
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 133/261 (50%), Gaps = 9/261 (3%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
L+ ++ K + A+ + E+ GC+PD YNALI+A KA L A ++
Sbjct: 362 LVDLVCKNCGPQKALEVLDELSLEGCQPDVVTYNALISASC----KAGRLNDAKFILTRL 417
Query: 211 KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
E +PN TY ILL A R D+V L +++++ PD+ TYN ++ + K G
Sbjct: 418 AA-EGLEPNGTTYCILLHALCNMRRWDEVCDLLEDMNQVNRDPDVTTYNIFINYFCKYGH 476
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
+ + VL RM N C PDI+T N L+++ K+ ++ + + + + K L T+N+
Sbjct: 477 LDQAIDVLERMVINNCSPDIVTCNTLLNAISKKGMVEEALGIARCIRENGYKLVLITYNT 536
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSK 388
+I K KA +F +M + +P ITY ++ G+C D A ++ +++
Sbjct: 537 LIDALAKKAEVKKAMVLFDEMLSDGISPDDITYGSLV--MGFCKKDMADEALDLLNQMLT 594
Query: 389 LGKDMKVSTLNAMLEAYCMNG 409
LG ++K +T +++A C +G
Sbjct: 595 LGFEVKTTTFVMVIQALCRDG 615
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 138/350 (39%), Gaps = 40/350 (11%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
I +T ++I + K G+ A + M SG PD N LI A L + L+
Sbjct: 248 IPETKCCVRIIRGLVKTGKANKARHVLEVMVLSGGVPDTISCNMLI-AQLC---RGGQLS 303
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
AL + M+ C P+ +T+N L+R R D+ + +KE P T +
Sbjct: 304 SALQVLEDMR-FSGCSPSGITFNTLIRCMFNQRMYDRAISFWKEQLRLGWPPYEMTSTLL 362
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR------------------ 303
+D KN ++ VL + C+PD++T+N LI + K
Sbjct: 363 VDLVCKNCGPQKALEVLDELSLEGCQPDVVTYNALISASCKAGRLNDAKFILTRLAAEGL 422
Query: 304 -----------------QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
+ +D++ + + + P + T+N I + K +A
Sbjct: 423 EPNGTTYCILLHALCNMRRWDEVCDLLEDMNQVNRDPDVTTYNIFINYFCKYGHLDQAID 482
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
V ++M +P +T ++ V A I + + G + + T N +++A
Sbjct: 483 VLERMVINNCSPDIVTCNTLLNAISKKGMVEEALGIARCIRENGYKLVLITYNTLIDALA 542
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
+A +LF+ + G++PD TY L + K +M + LL +M
Sbjct: 543 KKAEVKKAMVLFDEMLSDGISPDDITYGSLVMGFCKKDMADEALDLLNQM 592
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 6/215 (2%)
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
LH I P+ ++ K G + VL M + PD I+ N+LI +
Sbjct: 244 LHGQI--PETKCCVRIIRGLVKTGKANKARHVLEVMVLSGGVPDTISCNMLIAQLCRGGQ 301
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
QV + + S P+ TFN++I R+ +A +++ + + P +T
Sbjct: 302 LSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMYDRAISFWKEQLRLGWPPYEMTSTL 361
Query: 366 IITMYGYCDNVS--RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
++ + C N +A E+ DELS G V T NA++ A C G +A +
Sbjct: 362 LVDLV--CKNCGPQKALEVLDELSLEGCQPDVVTYNALISASCKAGRLNDAKFILTRLAA 419
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
G+ P+ +TY +L A + V LL+ M Q
Sbjct: 420 EGLEPNGTTYCILLHALCNMRRWDEVCDLLEDMNQ 454
>gi|357140426|ref|XP_003571769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Brachypodium distachyon]
Length = 637
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 171/402 (42%), Gaps = 42/402 (10%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K+ Q +VF M KQ++ + D Y+ LI + GK GQT + F EM +
Sbjct: 226 MLLDALAKAGMVDQAYQVFEDM-KQKYCVPDAYTYTILIRMSGKTGQTYKFLSFFDEMVS 284
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
GC + YN +I A K K + K + KM + C+PN TY++ L A
Sbjct: 285 RGCALNLIAYNTVIEA----LGKNKMVDKVIFVLSKMIESD-CQPNQFTYSLTLDILATE 339
Query: 234 RNVDQVNALFKELHESILAPDIYTY--------------------------NGVMDAY-- 265
+ ++N + ++ + L IY+Y +G DA+
Sbjct: 340 GQLHRLNEVL-DICDRYLNKSIYSYLVKSLCKSGHASEAHNVFCRMWNSHESGDRDAFIS 398
Query: 266 -----GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
+G E +L M DI +N++ + GK + + +F + S
Sbjct: 399 MLEVLCNSGKTLEAIDLLHMMPEKGIDTDIGMYNMVFSALGKLKQVSFISTLFDKMKASG 458
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P L T+N MI +YG+ L KA +F++M A P ITY +I G ++ A
Sbjct: 459 IAPDLFTYNIMISSYGRVGLVDKASGLFEEMEASSCKPDVITYNTLINCLGKNGDLDEAH 518
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+F E+ + G D V T + ++E + + A LF+ G P+ TY +L
Sbjct: 519 ILFKEMQEKGYDPDVFTYSTLIECFGKSNKVDMACSLFDEMIAEGCIPNIVTYNILLDCL 578
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFF--LEALETFSSSLA 480
+ K + M+Q G+ P+ + LE LE+ S A
Sbjct: 579 ERRGKTAEAHKHYETMKQQGLTPDSITYSILERLESRSQRTA 620
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 139/354 (39%), Gaps = 41/354 (11%)
Query: 144 DTGIYSKLIAVMGK-KGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
D Y++++A++ + K A+ L ++M G + S N L+ + A+ L
Sbjct: 117 DAFSYNRILALLFRSKADPGEALRLVAQMERDGVAGNISTVNLLVGMGGGGVEVARCLEL 176
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A + ++ G TY +++A ++R V + +++E+H DI+ YN ++
Sbjct: 177 AKKWGLRLNG--------YTYKCIVQAHLRSREVSKGFEVYEEMHRKGYKLDIFAYNMLL 228
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
DA K GM+ + V MK C PD T+ +LI GK K F ++
Sbjct: 229 DALAKAGMVDQAYQVFEDMKQKYCVPDAYTYTILIRMSGKTGQTYKFLSFFDEMVSRGCA 288
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
L +N++I GK ++ K +V KM P+ TY + + + R E+
Sbjct: 289 LNLIAYNTVIEALGKNKMVDKVIFVLSKMIESDCQPNQFTYSLTLDILATEGQLHRLNEV 348
Query: 383 FD----------------ELSKLGKDMKV----------------STLNAMLEAYCMNGL 410
D L K G + +MLE C +G
Sbjct: 349 LDICDRYLNKSIYSYLVKSLCKSGHASEAHNVFCRMWNSHESGDRDAFISMLEVLCNSGK 408
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA L G+ D Y +++ A K + L +M+ +GI P+
Sbjct: 409 TLEAIDLLHMMPEKGIDTDIGMYNMVFSALGKLKQVSFISTLFDKMKASGIAPD 462
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 181/412 (43%), Gaps = 39/412 (9%)
Query: 74 SEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFR 133
+EE S +++ ++ +++S+ L LNK V V C L + K+ Q ++
Sbjct: 397 NEEQPSSDILDLVEKAYSEMLDLGVVLNK-VNVSNFARC------LCGAGKFDQAFKIIC 449
Query: 134 WMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT 193
M + ++ D YSK+I + + A LF EM+ +G P Y LI +
Sbjct: 450 EMMG-KGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFC-- 506
Query: 194 RDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KA + +A +F +M KG C PN+VTY L+ A +A+ + + LF+ +
Sbjct: 507 --KAGLIQQARKWFDEMLHKG---CTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGC 561
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKS---------------NQCK-PDIITFNL 295
P++ TY ++D + K G I++ + +RM+ N C+ P++IT+
Sbjct: 562 KPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGA 621
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
L+D K + ++ +++ +P ++++I + K A+ VF KM+
Sbjct: 622 LVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERG 681
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM---KVSTLNAMLEAYCMNGLPT 412
Y+P+ TY I + DN R + LSK+ ++ V M++ C G
Sbjct: 682 YSPNLYTYSSFIDCL-FKDN--RLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTD 738
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA L G P+ TY + + K+ E +L + M G PN
Sbjct: 739 EAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPN 790
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 160/381 (41%), Gaps = 56/381 (14%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA----------------- 189
I++ LI K A LF +M GC+P VYN I +
Sbjct: 351 IFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVE 410
Query: 190 --------------HLHTRDKAKALAKALGYFQKMKGMERCK-------PNIVTYNILLR 228
++ + A+ L A + Q K + C+ P+ TY+ ++
Sbjct: 411 KAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKII--CEMMGKGFVPDDSTYSKVIG 468
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
A V++ +LF+E+ + + P +YTY ++D++ K G+I++ M C P
Sbjct: 469 FLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTP 528
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
+++T+ LI +Y K + +++F+ ++ KP + T+ ++I + KA KA ++
Sbjct: 529 NVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIY 588
Query: 349 QKMTA-------MKY---------TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKD 392
+M KY P+ ITY ++ + V A E+ D + G +
Sbjct: 589 ARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCE 648
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
+A+++ +C G +A +F G +P+ TY K N +LV K+
Sbjct: 649 PNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKV 708
Query: 453 LKRMEQNGIVPNKRFFLEALE 473
L +M +N PN + E ++
Sbjct: 709 LSKMLENSCTPNVVIYTEMVD 729
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 167/388 (43%), Gaps = 68/388 (17%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI K Q +A LF M GC+P+ Y ALI H KA + KA +
Sbjct: 533 YTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHC----KAGQIEKACQIY 588
Query: 208 QKMKG------MER--------CK-PNIVTYNILLRACAQARNVDQVNAL---------- 242
+M+G M++ C+ PN++TY L+ +A V + + L
Sbjct: 589 ARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCE 648
Query: 243 -------------------------FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
F ++ E +P++YTY+ +D K+ + + V
Sbjct: 649 PNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKV 708
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK---PTLPTFNSMIIN 334
LS+M N C P+++ + ++D K K ++ +K ++ +EK P + T+ +MI
Sbjct: 709 LSKMLENSCTPNVVIYTEMVDGLCK---IGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDG 765
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKD 392
+GK+ + +F+ M + P+FITY +I C N + A ++ DE+ +
Sbjct: 766 FGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHC--CSNGLLDEAYKLLDEMKQTYWP 823
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
+ + ++E + + T LL E S N V P S Y++L Y KA E+ L
Sbjct: 824 KHILSHRKIIEGFSQEFI-TSIGLLDELSENESV-PVDSLYRILIDNYIKAGRLEVALDL 881
Query: 453 LKRMEQ--NGIVPNKRFFLEALETFSSS 478
L+ + + V NK + +E S +
Sbjct: 882 LEEISSSPSHAVSNKYLYASLIENLSHA 909
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/425 (20%), Positives = 159/425 (37%), Gaps = 100/425 (23%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS------------ 174
+C E F + + ++ DT Y+++++ + + AM + MR+S
Sbjct: 261 KCREAFDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRIL 320
Query: 175 -----------------------GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK 211
GC P+ ++N+LI A+ +RD + A F+KM
Sbjct: 321 LSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYK----LFKKMI 376
Query: 212 GMERCKPNIVTYNILL-----------------------------------------RAC 230
C+P + YNI + R
Sbjct: 377 KC-GCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCL 435
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
A DQ + E+ PD TY+ V+ +++ S+ MK N P +
Sbjct: 436 CGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSV 495
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
T+ +LIDS+ K + + F ++H P + T+ ++I Y KA+ A+ +F+
Sbjct: 496 YTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEM 555
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M P+ +TY +I + + +A +I+ +++ D++ S +
Sbjct: 556 MLLEGCKPNVVTYTALIDGHCKAGQIEKACQIY---ARMRGDIESSDM------------ 600
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
D F+ HN P+ TY L KAN + +LL M +G PN+ +
Sbjct: 601 ----DKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDA 656
Query: 471 ALETF 475
++ F
Sbjct: 657 VIDGF 661
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/399 (20%), Positives = 157/399 (39%), Gaps = 60/399 (15%)
Query: 128 CLEVFRWMQKQRWYIADTGIYSKLIAVMG------------------------------- 156
C++ F W +Q Y ++ KL+ ++G
Sbjct: 122 CVKFFLWAGRQIGYSHTPQVFDKLLDLLGCNVNADDRVPLKFLMEIKDDDHELLRRLLNF 181
Query: 157 ------KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALGYFQ 208
+ G +A+ +++ G +P + YNALI L D A + + + +
Sbjct: 182 LVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYA 241
Query: 209 KMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ M+R + Y++ C +A + L E + PD YN ++ +
Sbjct: 242 FV--MDRYTLSCFAYSLCKGGKCREAFD------LIDEAED--FVPDTVFYNRMVSGLCE 291
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ +E +L RM+S+ C P+++T+ +L+ ++ + +++ ++ P
Sbjct: 292 ASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREI 351
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR-AREIFD-- 384
FNS+I Y K+R A +F+KM P ++ Y I C N + + +I D
Sbjct: 352 FNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIG--SVCSNEEQPSSDILDLV 409
Query: 385 -----ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
E+ LG + ++ C G +A + G PD STY +
Sbjct: 410 EKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGF 469
Query: 440 YTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
A+ E L + M++NGIVP+ + +++F +
Sbjct: 470 LCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKA 508
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 17/220 (7%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
IY++++ + K G+T A L +M GC P+ Y A+I K+ + + L
Sbjct: 723 IYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGF----GKSGKIEQCLEL 778
Query: 207 FQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
F+ M KG C PN +TY +L+ C +D+ L E+ ++ I ++ +++
Sbjct: 779 FRDMCSKG---CAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEG 835
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK----RQAFDKMEQVFKSLMHSK 320
+ + + +L + N+ P + +LID+Y K A D +E++ S H+
Sbjct: 836 FSQEFITS--IGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAV 893
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
L + S+I N A KA ++ M + P
Sbjct: 894 SNKYL--YASLIENLSHASKVDKALELYASMISKNVVPEL 931
>gi|225447241|ref|XP_002272784.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Vitis vinifera]
Length = 1008
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 163/367 (44%), Gaps = 41/367 (11%)
Query: 145 TGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKAL 204
T Y+ LI + GK G+ + A +F+EM G D +N +I +T L++A
Sbjct: 345 TATYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMI----YTCGSHGHLSEAE 400
Query: 205 GYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+M+ ER P+ TYNI L A N+D ++++ E L PD+ T+ V+
Sbjct: 401 TLLTEME--ERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIREVGLFPDVVTHRAVLH 458
Query: 264 AYGKNGMIKEMESVLSRMKSNQCK------PDIITFNL---------------------- 295
+ M+ E+E+V++ MK ++ + P +I +
Sbjct: 459 VLCERNMVGEVETVIAEMKRSRVRVDEHSIPVVIKMYVNEGLLDKAKIFLEEHLLEDELS 518
Query: 296 ------LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
+ID+Y ++ + + E VF +K + +N M+ YGKA+L KA +F+
Sbjct: 519 SRTRVAIIDAYAEKGLWAEAENVFIGKRDLGQKKDVVEYNVMVKAYGKAKLYDKAFSLFK 578
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
M P+ TY +I M+ D V AR I E+ K+G + T +A++ Y G
Sbjct: 579 GMRNHGTWPNESTYNSLIQMFSGGDLVDEARGILAEMQKMGFKPQCLTFSAVIACYARLG 638
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFL 469
+A ++E +GV P+ Y L +++ E ++M++ GI N+
Sbjct: 639 RLPDAVGVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEALCYFRKMDEFGISANQIVLT 698
Query: 470 EALETFS 476
++ +S
Sbjct: 699 SLIKAYS 705
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 156/378 (41%), Gaps = 40/378 (10%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + GK+ + +VF M K + DT ++ +I G G A L +EM
Sbjct: 351 LIDLYGKAGRLKDAADVFAEMLKLGVAM-DTITFNTMIYTCGSHGHLSEAETLLTEMEER 409
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G PD YN ++ + + + AL ++K++ + P++VT+ +L +
Sbjct: 410 GISPDTKTYNIFLSLYADGGN----IDAALKCYRKIREV-GLFPDVVTHRAVLHVLCERN 464
Query: 235 NVDQVNALFKELHESILAPD---------IYTYNG------------------------- 260
V +V + E+ S + D +Y G
Sbjct: 465 MVGEVETVIAEMKRSRVRVDEHSIPVVIKMYVNEGLLDKAKIFLEEHLLEDELSSRTRVA 524
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++DAY + G+ E E+V + K D++ +N+++ +YGK + +DK +FK + +
Sbjct: 525 IIDAYAEKGLWAEAENVFIGKRDLGQKKDVVEYNVMVKAYGKAKLYDKAFSLFKGMRNHG 584
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P T+NS+I + L +A + +M M + P +T+ +I Y + A
Sbjct: 585 TWPNESTYNSLIQMFSGGDLVDEARGILAEMQKMGFKPQCLTFSAVIACYARLGRLPDAV 644
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+++E+ +LG +++ + G EA F G++ + L KAY
Sbjct: 645 GVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEALCYFRKMDEFGISANQIVLTSLIKAY 704
Query: 441 TKANMKELVQKLLKRMEQ 458
+K E + L + M+
Sbjct: 705 SKVGCLEGAKTLYEGMKD 722
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 119/284 (41%), Gaps = 21/284 (7%)
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+ L F+ +K E PN++ YN++LR +A+ D++ + E+ ++ + P TY +
Sbjct: 166 RVLRVFEWIKSQEDYVPNVIHYNVVLRVLGRAQKWDELRLCWIEMAKNGVLPTNNTYGML 225
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK- 320
+D YGK G++KE + MK PD + N ++ FD ++ ++ K
Sbjct: 226 VDVYGKAGLVKEALLWIKHMKLRGVFPDEVAMNTVVRVLKDAGEFDWADRFYRDWCVGKV 285
Query: 321 ---------------EKPTLPTFNSMIINYGKARLQGKAEYV----FQKMTAMKYTPSFI 361
E + P ++ ++ G+ + P
Sbjct: 286 ELGDFDLESVADSDDEIGSAPVSLKHFLSTELFKIGGRRPISNIMDSSNTDGSRRKPRLT 345
Query: 362 -TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
TY +I +YG + A ++F E+ KLG M T N M+ +G +EA+ L
Sbjct: 346 ATYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIYTCGSHGHLSEAETLLTE 405
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G++PD+ TY + Y + K +++ + G+ P+
Sbjct: 406 MEERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIREVGLFPD 449
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 121/265 (45%), Gaps = 2/265 (0%)
Query: 215 RCKPNI-VTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
R KP + TYN L+ +A + +F E+ + +A D T+N ++ G +G + E
Sbjct: 339 RRKPRLTATYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIYTCGSHGHLSE 398
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
E++L+ M+ PD T+N+ + Y D + ++ + P + T +++
Sbjct: 399 AETLLTEMEERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIREVGLFPDVVTHRAVLH 458
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
+ + G+ E V +M + + +I MY + +A+ IF E L ++
Sbjct: 459 VLCERNMVGEVETVIAEMKRSRVRVDEHSIPVVIKMYVNEGLLDKAK-IFLEEHLLEDEL 517
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
T A+++AY GL EA+ +F ++G D Y ++ KAY KA + + L
Sbjct: 518 SSRTRVAIIDAYAEKGLWAEAENVFIGKRDLGQKKDVVEYNVMVKAYGKAKLYDKAFSLF 577
Query: 454 KRMEQNGIVPNKRFFLEALETFSSS 478
K M +G PN+ + ++ FS
Sbjct: 578 KGMRNHGTWPNESTYNSLIQMFSGG 602
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 121/262 (46%), Gaps = 1/262 (0%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
K ++V YN++++A +A+ D+ +LFK + P+ TYN ++ + ++ E
Sbjct: 551 KKDVVEYNVMVKAYGKAKLYDKAFSLFKGMRNHGTWPNESTYNSLIQMFSGGDLVDEARG 610
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+L+ M+ KP +TF+ +I Y + V++ ++ KP + S+I +
Sbjct: 611 ILAEMQKMGFKPQCLTFSAVIACYARLGRLPDAVGVYEEMVRLGVKPNEVVYGSLINGFS 670
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
+ +A F+KM + + I +I Y + A+ +++ + L +
Sbjct: 671 ETGNVEEALCYFRKMDEFGISANQIVLTSLIKAYSKVGCLEGAKTLYEGMKDLEGGPDIV 730
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
N+M+ Y GL +EA L+F++ G + D ++ + Y M + + M
Sbjct: 731 ASNSMINLYADLGLVSEAKLIFDDLRQKG-SADGVSFATMMYLYKNLGMLDEAIDVADEM 789
Query: 457 EQNGIVPNKRFFLEALETFSSS 478
+Q+G++ + F + + ++++
Sbjct: 790 KQSGLLRDCASFNKVMACYATN 811
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 100/455 (21%), Positives = 177/455 (38%), Gaps = 42/455 (9%)
Query: 15 TLSSSSASSSSSSSSSSFNQSSSQNYNFTHRHIPLSLRTRPRTGICCVWTRPRSKRGRKS 74
TLSSS S ++ S Q N L+ RT T ++ + S
Sbjct: 64 TLSSSKIDKSLGRNAYSHTQKQRLNPRGARVFPGFKLQCHSRTVALPTKTSISRRKKKYS 123
Query: 75 EELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRW 134
L S ++R+ + + TL+ K+ E +L E+ W + L VF W
Sbjct: 124 GVLPS------ILRALESENNIEDTLSSCGKLSPKEQTVILKEQ----SSWERVLRVFEW 173
Query: 135 MQKQRWYIADTGIYSKLIAVMG---KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
++ Q Y+ + Y+ ++ V+G K + RL W+ EM +G P + Y L+ +
Sbjct: 174 IKSQEDYVPNVIHYNVVLRVLGRAQKWDELRLC-WI--EMAKNGVLPTNNTYGMLVDVY- 229
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KA + +AL + + MK + P+ V N ++R A D + +++ +
Sbjct: 230 ---GKAGLVKEALLWIKHMK-LRGVFPDEVAMNTVVRVLKDAGEFDWADRFYRDWCVGKV 285
Query: 252 APDIYTYNGVMDAYGKNG---------MIKEMESVLSR------MKSNQC-----KPDII 291
+ V D+ + G + E+ + R M S+ KP +
Sbjct: 286 ELGDFDLESVADSDDEIGSAPVSLKHFLSTELFKIGGRRPISNIMDSSNTDGSRRKPRLT 345
Query: 292 -TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
T+N LID YGK VF ++ TFN+MI G +AE + +
Sbjct: 346 ATYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIYTCGSHGHLSEAETLLTE 405
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M +P TY +++Y N+ A + + ++ ++G V T A+L C +
Sbjct: 406 MEERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIREVGLFPDVVTHRAVLHVLCERNM 465
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
E + + V D + ++ K Y +
Sbjct: 466 VGEVETVIAEMKRSRVRVDEHSIPVVIKMYVNEGL 500
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 134/332 (40%), Gaps = 8/332 (2%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y LI + G A+ F +M G + V +LI A+ K L A
Sbjct: 661 VYGSLINGFSETGNVEEALCYFRKMDEFGISANQIVLTSLIKAY----SKVGCLEGAKTL 716
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
++ MK +E P+IV N ++ A V + +F +L + A D ++ +M Y
Sbjct: 717 YEGMKDLE-GGPDIVASNSMINLYADLGLVSEAKLIFDDLRQKGSA-DGVSFATMMYLYK 774
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
GM+ E V MK + D +FN ++ Y ++ ++ + P
Sbjct: 775 NLGMLDEAIDVADEMKQSGLLRDCASFNKVMACYATNGQLSACGELLHEMISRRILPDTG 834
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
TF M K L E V Q ++ + + I +++ + A E +
Sbjct: 835 TFKVMFTVLKKGGL--PTEAVTQLESSYQEGKPYARQAVITSVFSTVGLHAFALESCETF 892
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
D+ S N + AY +G +A +F + G+ PD TY L Y KA M
Sbjct: 893 LNAEVDLDSSFYNVAIYAYGASGSIDKALKMFMKMQDEGLEPDLVTYINLAGCYGKAGML 952
Query: 447 ELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
E ++++ +++ I PN+ F ++ + S+
Sbjct: 953 EGLKRIYSQLKYREIEPNESLFKAIIDAYRSA 984
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 10/200 (5%)
Query: 128 CLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
C E+ M +R + DTG + + V+ K G A+ +++ +S P A+I
Sbjct: 817 CGELLHEMISRR-ILPDTGTFKVMFTVLKKGGLPTEAV---TQLESSYQEGKPYARQAVI 872
Query: 188 TAHLHTRD-KAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
T+ T A AL + ++ YN+ + A + ++D+ +F ++
Sbjct: 873 TSVFSTVGLHAFALESCETFLNAEVDLDSS-----FYNVAIYAYGASGSIDKALKMFMKM 927
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
+ L PD+ TY + YGK GM++ ++ + S++K + +P+ F +ID+Y +
Sbjct: 928 QDEGLEPDLVTYINLAGCYGKAGMLEGLKRIYSQLKYREIEPNESLFKAIIDAYRSAKRH 987
Query: 307 DKMEQVFKSLMHSKEKPTLP 326
D E V + + + + LP
Sbjct: 988 DLAELVSQEMKFAFDTTMLP 1007
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 99/243 (40%), Gaps = 23/243 (9%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L++ LG D + ++V M KQ + D ++K++A GQ L EM +
Sbjct: 772 LYKNLGMLD---EAIDVADEM-KQSGLLRDCASFNKVMACYATNGQLSACGELLHEMISR 827
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER------CKPNIVTYNILLR 228
PD + + T +A+ + +Q+ K R + + L
Sbjct: 828 RILPDTGTFKVMFTVLKKGGLPTEAVTQLESSYQEGKPYARQAVITSVFSTVGLHAFALE 887
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
+C N + + D YN + AYG +G I + + +M+ +P
Sbjct: 888 SCETFLNAE-------------VDLDSSFYNVAIYAYGASGSIDKALKMFMKMQDEGLEP 934
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
D++T+ L YGK + +++++ L + + +P F ++I Y A+ AE V
Sbjct: 935 DLVTYINLAGCYGKAGMLEGLKRIYSQLKYREIEPNESLFKAIIDAYRSAKRHDLAELVS 994
Query: 349 QKM 351
Q+M
Sbjct: 995 QEM 997
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 148/317 (46%), Gaps = 17/317 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + K G+TR A+ L + + + +YN +I K K + A +
Sbjct: 176 YGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDG----MSKDKHVNDAFDLY 231
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M +R P++VTY+ L+R + LF ++ + PD+YT+N ++D + K
Sbjct: 232 SEMVA-KRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCK 290
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G +K+ ++VL M KP++ TFN L+D + K + + + VF +M KP + T
Sbjct: 291 EGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVT 350
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ S++ Y + KA+ +F M+ T + +Y +I + V +A ++F E+
Sbjct: 351 YCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMH 410
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
V T N++++ C +G + A L H+ G P+ TY
Sbjct: 411 HKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITY------------NS 458
Query: 448 LVQKLLKRMEQNGIVPN 464
++ LL +++ GI PN
Sbjct: 459 ILNALLTKLKDQGIQPN 475
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 140/307 (45%), Gaps = 5/307 (1%)
Query: 158 KGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCK 217
KGQ A+ ++ G D Y LI K AL +++ G + +
Sbjct: 151 KGQIHQALNFHDKLVALGFHLDQVSYGTLINGLC----KVGETRAALQLLRRVDG-KLVQ 205
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
N V YN ++ ++ ++V+ L+ E+ ++PD+ TY+ ++ + G +K+ +
Sbjct: 206 LNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDL 265
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
++M KPD+ TFN+L+D + K K + V +M KP + TFN+++ + K
Sbjct: 266 FNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCK 325
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
R + + VF M P+ +TY ++ Y V++A++IF+ +S+ G V +
Sbjct: 326 DRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHS 385
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
N M+ +C +A LF H+ + PD TY L K+ +L+ M
Sbjct: 386 YNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMH 445
Query: 458 QNGIVPN 464
G PN
Sbjct: 446 DRGQPPN 452
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 145/313 (46%), Gaps = 23/313 (7%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ +I M K A L+SEM PD Y+ALI L A+
Sbjct: 210 MYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFF----IVGKLKDAIDL 265
Query: 207 FQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
F KM +E KP++ T+NIL+ C + R N L + + I P++ T+N ++D +
Sbjct: 266 FNKMI-LENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDI-KPNVSTFNTLVDGF 323
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K+ +KE ++V + M KP+++T+ L+D Y + +K +++F ++ +
Sbjct: 324 CKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANV 383
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIF 383
++N MI + K + KA +F +M P +TY +I G C + +S A ++
Sbjct: 384 HSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLID--GLCKSGKISYAFQLV 441
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+E+ G+ + T N++L A L + G+ P+ T +L K ++
Sbjct: 442 NEMHDRGQPPNIITYNSILNA------------LLTKLKDQGIQPNMHTDTILIKGLCQS 489
Query: 444 NMKELVQKLLKRM 456
E +K+ + +
Sbjct: 490 GKLEAARKVFEDL 502
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 105/227 (46%), Gaps = 11/227 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS LI G+ + A+ LF++M +PD +N L+ K L KA
Sbjct: 242 DVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFC----KEGRLKKA 297
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
M ++ KPN+ T+N L+ + R + + +F + + + P++ TY +MD
Sbjct: 298 KNVLDMMM-IQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMD 356
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
Y + + + + + M ++ ++N++I+ + K + DK ++F + H P
Sbjct: 357 GYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIP 416
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECII 367
+ T+NS+I K+ GK Y FQ + M P+ ITY I+
Sbjct: 417 DVVTYNSLIDGLCKS---GKISYAFQLVNEMHDRGQPPNIITYNSIL 460
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 123/308 (39%), Gaps = 44/308 (14%)
Query: 196 KAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
K+K L Q+M+ E PN VT+NIL+ Q + ++ ++ + PDI
Sbjct: 80 KSKHYHTVLSLSQQME-FEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDI 138
Query: 256 YTYNGVMD----------------------------AYGK--NGMIKEMES-----VLSR 280
T N + +YG NG+ K E+ +L R
Sbjct: 139 ITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRR 198
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
+ + + + +N +ID K + + ++ ++ + P + T++++I +
Sbjct: 199 VDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGK 258
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMK--VS 396
A +F KM P T+ ++ G+C + +A+ + D + + +D+K VS
Sbjct: 259 LKDAIDLFNKMILENIKPDVYTFNILVD--GFCKEGRLKKAKNVLDMM--MIQDIKPNVS 314
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
T N +++ +C + E +F G+ P+ TY L Y +K+ M
Sbjct: 315 TFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTM 374
Query: 457 EQNGIVPN 464
Q G+ N
Sbjct: 375 SQRGVTAN 382
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/277 (19%), Positives = 120/277 (43%), Gaps = 35/277 (12%)
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
+N +L + ++++ V +L +++ + P+ T+N +++ + + G+I SVL+++
Sbjct: 71 FNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKIL 130
Query: 283 SNQCKPDIITFNLLIDSY---GK-RQAFD----------KMEQV-FKSLMHSKEKP---- 323
+PDIIT N I + G+ QA + ++QV + +L++ K
Sbjct: 131 KMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 190
Query: 324 ----------------TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
+N++I K + A ++ +M A + +P +TY +I
Sbjct: 191 AALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALI 250
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
+ + A ++F+++ V T N +++ +C G +A + + +
Sbjct: 251 RGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIK 310
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
P+ ST+ L + K + + + M + GI PN
Sbjct: 311 PNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPN 347
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 65/151 (43%)
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
D +F SL+H T FN ++ + K++ + Q+M P+F+T+ +
Sbjct: 50 DGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNIL 109
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I + + A + ++ K+G + + TLN ++ +C+ G +A + +G
Sbjct: 110 INCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGF 169
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
D +Y L K +LL+R++
Sbjct: 170 HLDQVSYGTLINGLCKVGETRAALQLLRRVD 200
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 89/214 (41%), Gaps = 10/214 (4%)
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ +VD +LF L + +N ++ + K+ + S+ +M+ P+ +
Sbjct: 45 HSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFV 104
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
TFN+LI+ + + V ++ +P + T N+ I + +A K+
Sbjct: 105 TFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKL 164
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
A+ + ++Y +I G C V R L ++ D K+ LNA++ ++G+
Sbjct: 165 VALGFHLDQVSYGTLIN--GLC-KVGETRAALQLLRRV--DGKLVQLNAVMYNTVIDGMS 219
Query: 412 TEADL-----LFENSHNMGVTPDSSTYKLLYKAY 440
+ + L+ ++PD TY L + +
Sbjct: 220 KDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGF 253
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 173/383 (45%), Gaps = 15/383 (3%)
Query: 104 VKVVRSEHCF-LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTR 162
V VV + H F +L KS + ++ M+ R+ D Y+ LI++ KKG
Sbjct: 191 VGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEME-SRFIFPDLFTYNTLISLYCKKGMHY 249
Query: 163 LAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVT 222
A+ + M G PD YN+LI + + +AL F+++ G PN VT
Sbjct: 250 EALGIQDRMERGGVSPDIVTYNSLIYGFC----REGRMREALRLFREING---ATPNHVT 302
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y L+ + ++++ L + + L P + TYN ++ + G IK+ +L+ M
Sbjct: 303 YTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMS 362
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR-LQ 341
+ +PD +T N LI++Y K +V K ++ + KP TF ++I + K +
Sbjct: 363 ERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVD 422
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
E++F+ + A ++PS+ TY ++ Y DN + DELS+ G + +S A+
Sbjct: 423 SAKEFLFEMLDA-GFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRAL 481
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ C A+ +F G+ DS Y L AY KA +L M++ +
Sbjct: 482 IRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRL 541
Query: 462 VPNKRFFLEALETFSSSLAGSQS 484
+ + + FS+S AG S
Sbjct: 542 MITLKIY----RCFSASYAGDGS 560
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 144/322 (44%), Gaps = 7/322 (2%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
+++ I S L+ T+ A+ +F MR G +P L L++ KA+
Sbjct: 125 SNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVL----LNSLAKARLTNM 180
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
++KM + PNI +N+L+ AC ++ +V++ L E+ + PD++TYN ++
Sbjct: 181 VWKVYKKMVRVG-VVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLI 239
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
Y K GM E + RM+ PDI+T+N LI + + + ++F+ + +
Sbjct: 240 SLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGAT 297
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P T+ ++I Y + +A + + M P +TY I+ + A +
Sbjct: 298 PNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRL 357
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+E+S+ + T N ++ AYC G A + + G+ PD T+K L + K
Sbjct: 358 LNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCK 417
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
+ + ++ L M G P+
Sbjct: 418 LHEVDSAKEFLFEMLDAGFSPS 439
>gi|449530353|ref|XP_004172160.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like, partial [Cucumis sativus]
Length = 312
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 137/265 (51%), Gaps = 9/265 (3%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E+F MQ + Y D Y+ L+ + G A +FS M++ GC PD + YN ++ A
Sbjct: 52 EIFEQMQ-EAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDA 110
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ +A A F++MK + P + ++ +LL A + A NV + + ++H+S
Sbjct: 111 Y----GRAGLHEDAQAVFEEMKRI-GITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKS 165
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
L PD + N +++ YG+ G +ME + S M+ C+ DI T+N+LI+ YG+ ++M
Sbjct: 166 GLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERM 225
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
E++F+ L +P + T+ S I Y + +L + +F+KM P T + +++
Sbjct: 226 EELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGGTAKVLLSA 285
Query: 370 YGYCDNVSRAREIFDELSKLGKDMK 394
C + + ++ + + + KD+K
Sbjct: 286 ---CSSEEQIEQVTNVVRTMHKDLK 307
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 125/288 (43%), Gaps = 36/288 (12%)
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F +M+ +RCKPNI T+ L+ A A+ ++ +F+++ E+ PD+Y YN +M++Y
Sbjct: 19 FDEMR-TQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYS 77
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL---------- 316
+ G + S M+ C+PD ++N+++D+YG+ + + VF+ +
Sbjct: 78 RAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMK 137
Query: 317 ------------------------MH-SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
MH S KP NSM+ YG+ GK E +F M
Sbjct: 138 SHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTM 197
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
TY +I +YG V R E+F L + V T + + AY L
Sbjct: 198 QKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLY 257
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
LFE + G PD T K+L A + E V +++ M ++
Sbjct: 258 KRCLELFEKMIDAGCYPDGGTAKVLLSACSSEEQIEQVTNVVRTMHKD 305
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 131/274 (47%), Gaps = 6/274 (2%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
+F M+ QR + ++ L+ + ++G A +F +M+ +G PD YNAL+ ++
Sbjct: 18 IFDEMRTQRCK-PNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESY 76
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
+A A F M+ M C+P+ +YNI++ A +A + A+F+E+
Sbjct: 77 ----SRAGFPYGAAEIFSLMQHM-GCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIG 131
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
+ P + ++ ++ AY G + + E ++ +M + KPD N +++ YG+ F KME
Sbjct: 132 ITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKME 191
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+F ++ + + T+N +I YG+A + E +FQ + A P +T+ I Y
Sbjct: 192 DLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAY 251
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
R E+F+++ G T +L A
Sbjct: 252 SRKKLYKRCLELFEKMIDAGCYPDGGTAKVLLSA 285
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 69/135 (51%)
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A+ +F +M + P+ T+ ++ +A EIF+++ + G + V NA++E
Sbjct: 15 AQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALME 74
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
+Y G P A +F +MG PD ++Y ++ AY +A + E Q + + M++ GI P
Sbjct: 75 SYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITP 134
Query: 464 NKRFFLEALETFSSS 478
+ + L +SS+
Sbjct: 135 TMKSHMLLLSAYSSA 149
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 79/214 (36%), Gaps = 42/214 (19%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
LL + +C ++ M K DT + + ++ + G+ GQ LFS M+
Sbjct: 141 LLLSAYSSAGNVAKCEDIIGQMHKSGLK-PDTFVMNSMLNLYGRLGQFGKMEDLFSTMQK 199
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
CR D S YN LI + +A
Sbjct: 200 GPCRADISTYNILINVY----------------------------------------GRA 219
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
V+++ LF+ L L PD+ T+ + AY + + K + +M C PD T
Sbjct: 220 GFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGGTA 279
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+L+ + + +++ V ++ MH K LP
Sbjct: 280 KVLLSACSSEEQIEQVTNVVRT-MHKDLKTLLPV 312
>gi|115445137|ref|NP_001046348.1| Os02g0226900 [Oryza sativa Japonica Group]
gi|49388538|dbj|BAD25660.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|49388672|dbj|BAD25856.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535879|dbj|BAF08262.1| Os02g0226900 [Oryza sativa Japonica Group]
Length = 637
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 177/400 (44%), Gaps = 46/400 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K+ Q +VF M KQ+ + D Y+ LI + GK G+T + F EM +
Sbjct: 226 MLLDALAKAGMVDQAFQVFEDM-KQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVS 284
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
GC + +N +I A K K + K + KM + C+PN TY+I L A
Sbjct: 285 KGCVLNLIAFNTIIEA----LGKNKMVDKVIFVLSKMVEND-CQPNQFTYSITLDILATE 339
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD---- 289
+ ++N + ++ + IY+Y ++ + K+G E +V RM ++ K D
Sbjct: 340 GQLHRLNEVL-DICSRFMNRSIYSY--LVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAF 396
Query: 290 ---------------------------IIT----FNLLIDSYGKRQAFDKMEQVFKSLMH 318
I+T +N++ + GK + + +F +
Sbjct: 397 VSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKT 456
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
+ P + T+N MI +YG+ L KA +F+ M A P +TY +I G ++
Sbjct: 457 NGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDE 516
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A +F E+ + G D V T + ++E + + A LF+ + G TP+ TY +L
Sbjct: 517 AHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLD 576
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNKRFF--LEALETFS 476
+ E KL + M+Q G++P+ + LE LE+ S
Sbjct: 577 CLERRGKTEEAHKLYETMKQQGLIPDSITYSILERLESRS 616
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 1/222 (0%)
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
C + ++ ++ L + E + D+ YN V A GK + + ++ +MK+N PD
Sbjct: 404 CNAEKTLEAID-LLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPD 462
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
+ T+N++I SYG+ DK ++F+ + S KP + T+NS+I GK +A +F+
Sbjct: 463 VFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLFK 522
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
+M Y P TY +I +G + V A +FDE+ G + T N +L+ G
Sbjct: 523 EMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLDCLERRG 582
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
EA L+E G+ PDS TY +L + +++ ++K
Sbjct: 583 KTEEAHKLYETMKQQGLIPDSITYSILERLESRSQRTVRIRK 624
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 150/385 (38%), Gaps = 43/385 (11%)
Query: 127 QCLEVFRWMQKQRWYIADTG-IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
+CLE+ +W + +G Y ++ + + ++ EMR G + D YN
Sbjct: 172 RCLEL-----ASKWGLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNM 226
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
L+ A KA + +A F+ MK + C P+ TY IL+R +A + + F E
Sbjct: 227 LLDA----LAKAGMVDQAFQVFEDMK-QKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDE 281
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ ++ +N +++A GKN M+ ++ VLS+M N C+P+ T+++ +D
Sbjct: 282 MVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQ 341
Query: 306 FDKMEQV--------------------------------FKSLMHSKEKPTLPTFNSMII 333
++ +V F + +S EK F SM+
Sbjct: 342 LHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLE 401
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
A +A + M Y + + G VS +FD++ G
Sbjct: 402 VLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIP 461
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
V T N M+ +Y GL +A LFE PD TY L K + L
Sbjct: 462 DVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLF 521
Query: 454 KRMEQNGIVPNKRFFLEALETFSSS 478
K M++ G P+ + +E F S
Sbjct: 522 KEMQEKGYDPDVFTYSILIECFGKS 546
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 144/357 (40%), Gaps = 47/357 (13%)
Query: 144 DTGIYSKLIAVMGK-KGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
D Y++++A++ + + A+ L ++M G + S N L+ + + L
Sbjct: 117 DAFSYNRILALLFRTRAGPSEALRLVADMERDGVAGNISTINLLVGMGGGGVEMERCLEL 176
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A + ++ G TY +++A ++R V + +++E+ DI+ YN ++
Sbjct: 177 ASKWGLRLSGY--------TYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLL 228
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
DA K GM+ + V MK C PD T+ +LI GK K F ++
Sbjct: 229 DALAKAGMVDQAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCV 288
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
L FN++I GK ++ K +V KM P+ TY + + + R E+
Sbjct: 289 LNLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEV 348
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF---ENSH----------------- 422
D S+ M S + ++++ C +G +EA +F NSH
Sbjct: 349 LDICSRF---MNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCN 405
Query: 423 ---------------NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G+ D Y +++ A K + L +M+ NGI+P+
Sbjct: 406 AEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPD 462
>gi|168011113|ref|XP_001758248.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690704|gb|EDQ77070.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 658
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 154/322 (47%), Gaps = 15/322 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + G+ A F M+ + +Y+ L+ A+ + R + G
Sbjct: 292 YGLLIDAYSRAGRLDQAKAAFHNMKVENVPANAFIYSRLMVAYRNAR-------QWDGTI 344
Query: 208 QKMKGM--ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+ +K M KPN +NIL+ + + Q F ++ + PD+ T+N +++A+
Sbjct: 345 RLLKDMYASNIKPNQFIFNILIDTYGKFGRLPQAMRTFAQMDKEGFKPDVVTWNSLIEAH 404
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ G+I E +L +M+ +C P + T+N+++++ G + +M + + P +
Sbjct: 405 CRAGLITEALDLLKQMQERECVPSLHTYNIILNALGWHNRWKEMALLLDEMRFKGLDPNV 464
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY---GYCDNVSRAREI 382
T+ +++ +YG ++ +A ++M + PS Y + Y G C+ +A E+
Sbjct: 465 VTYTTLVDSYGTSKRYREASEYLKQMKSQGLQPSTSVYCALANSYAKRGLCE---QAMEV 521
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
F + K G ++ +S LN ++ A+ + G EA +F+ +G++PD TY L KA K
Sbjct: 522 FKSMEKDGVELNLSMLNLLINAFGVAGKYVEAFSVFDYILEVGMSPDVVTYTTLMKALIK 581
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
A + V + ++M + G P+
Sbjct: 582 AEQLDQVPDVYEQMVRAGCTPD 603
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 136/312 (43%), Gaps = 9/312 (2%)
Query: 169 SEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCK--PNIVTYNIL 226
+ + G D +YN +I A+ D KA FQ M M+ C P++ +Y+ L
Sbjct: 173 ANIEQEGLEMDTKLYNDVINAYCRAGDPDKA-------FQYMGLMQACDLVPDVRSYSSL 225
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+ R +D A + E+ ++ T N ++ AY + +++++E ++ +
Sbjct: 226 IETLVVVRRLDDAEAAYAEMKSKSYKINLRTLNALLSAYTRKSLLEQVEKLMQDAEDAGL 285
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
K ++ LLID+Y + D+ + F ++ ++ +++ Y AR
Sbjct: 286 KLSTFSYGLLIDAYSRAGRLDQAKAAFHNMKVENVPANAFIYSRLMVAYRNARQWDGTIR 345
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+ + M A P+ + +I YG + +A F ++ K G V T N+++EA+C
Sbjct: 346 LLKDMYASNIKPNQFIFNILIDTYGKFGRLPQAMRTFAQMDKEGFKPDVVTWNSLIEAHC 405
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
GL TEA L + P TY ++ A N + + LL M G+ PN
Sbjct: 406 RAGLITEALDLLKQMQERECVPSLHTYNIILNALGWHNRWKEMALLLDEMRFKGLDPNVV 465
Query: 467 FFLEALETFSSS 478
+ ++++ +S
Sbjct: 466 TYTTLVDSYGTS 477
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 147/351 (41%), Gaps = 43/351 (12%)
Query: 152 IAVMGKKGQTRL--AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQK 209
IA+ G ++R+ AM LF +++ G P P YNA++ T + L AL +
Sbjct: 83 IAITGLSKESRVEEAMLLFDQLKQLGVSPGPMAYNAIV----GTCAREDRLETALELMNQ 138
Query: 210 MKGMERCKPNIVTYNILLRACAQAR-NVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
M+G +P+ V Y ++ +ACA+ R VD ++ + + + L D YN V++AY +
Sbjct: 139 MRG-SGFQPDNVNYTLVFQACAKKRVGVDVISRVCANIEQEGLEMDTKLYNDVINAYCRA 197
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
G + + M++ PD+ +++ LI++ + D E + + K L T
Sbjct: 198 GDPDKAFQYMGLMQACDLVPDVRSYSSLIETLVVVRRLDDAEAAYAEMKSKSYKINLRTL 257
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF----- 383
N+++ Y + L + E + Q S +Y +I Y + +A+ F
Sbjct: 258 NALLSAYTRKSLLEQVEKLMQDAEDAGLKLSTFSYGLLIDAYSRAGRLDQAKAAFHNMKV 317
Query: 384 -----------------------DELSKLGKDMKVSTL-------NAMLEAYCMNGLPTE 413
D +L KDM S + N +++ Y G +
Sbjct: 318 ENVPANAFIYSRLMVAYRNARQWDGTIRLLKDMYASNIKPNQFIFNILIDTYGKFGRLPQ 377
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A F G PD T+ L +A+ +A + LLK+M++ VP+
Sbjct: 378 AMRTFAQMDKEGFKPDVVTWNSLIEAHCRAGLITEALDLLKQMQERECVPS 428
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 140/325 (43%), Gaps = 5/325 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT +Y+ +I + G A M+ PD Y++LI + R L A
Sbjct: 183 DTKLYNDVINAYCRAGDPDKAFQYMGLMQACDLVPDVRSYSSLIETLVVVR----RLDDA 238
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ +MK + K N+ T N LL A + ++QV L ++ ++ L ++Y ++D
Sbjct: 239 EAAYAEMKS-KSYKINLRTLNALLSAYTRKSLLEQVEKLMQDAEDAGLKLSTFSYGLLID 297
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
AY + G + + ++ MK + ++ L+ +Y + +D ++ K + S KP
Sbjct: 298 AYSRAGRLDQAKAAFHNMKVENVPANAFIYSRLMVAYRNARQWDGTIRLLKDMYASNIKP 357
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
FN +I YGK +A F +M + P +T+ +I + ++ A ++
Sbjct: 358 NQFIFNILIDTYGKFGRLPQAMRTFAQMDKEGFKPDVVTWNSLIEAHCRAGLITEALDLL 417
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
++ + + T N +L A + E LL + G+ P+ TY L +Y +
Sbjct: 418 KQMQERECVPSLHTYNIILNALGWHNRWKEMALLLDEMRFKGLDPNVVTYTTLVDSYGTS 477
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFF 468
+ LK+M+ G+ P+ +
Sbjct: 478 KRYREASEYLKQMKSQGLQPSTSVY 502
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 15/195 (7%)
Query: 107 VRSEHCF-LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI--YSKLIAVMGKKGQTRL 163
V S H + ++ LG ++W E+ + + R+ D + Y+ L+ G + R
Sbjct: 426 VPSLHTYNIILNALGWHNRWK---EMALLLDEMRFKGLDPNVVTYTTLVDSYGTSKRYRE 482
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK--GMERCKPNIV 221
A +M++ G +P SVY AL ++ K +A+ F+ M+ G+E N+
Sbjct: 483 ASEYLKQMKSQGLQPSTSVYCALANSYA----KRGLCEQAMEVFKSMEKDGVEL---NLS 535
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
N+L+ A A + ++F + E ++PD+ TY +M A K + ++ V +M
Sbjct: 536 MLNLLINAFGVAGKYVEAFSVFDYILEVGMSPDVVTYTTLMKALIKAEQLDQVPDVYEQM 595
Query: 282 KSNQCKPDIITFNLL 296
C PD + ++L
Sbjct: 596 VRAGCTPDDMAKDML 610
>gi|410110117|gb|AFV61138.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
hermannioides]
Length = 382
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 133/276 (48%), Gaps = 5/276 (1%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
D +YS LI + K A+ +FS ++ SG PD YNA+I KAK +
Sbjct: 3 GDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVF----GKAKLFRE 58
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A +MK PN +Y+ LL + + + ++F E+ E D+ T N ++
Sbjct: 59 ARSLISEMK-TAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMI 117
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D YG+ GM KE + + M+ +P+++++N L+ YG + F + +F+ + +
Sbjct: 118 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 177
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
+ T+NSM++ YGK KA + Q+M + P+ ITY II+++G + RA +
Sbjct: 178 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAML 237
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
F +L G ++ M+ AY GL A L
Sbjct: 238 FQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLL 273
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 130/263 (49%), Gaps = 1/263 (0%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+KA+ F ++K P++V YN ++ +A+ + +L E+ + + P+ +Y+
Sbjct: 22 SKAISIFSRLK-RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYST 80
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ Y +N E SV S M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 81 LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 140
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P + ++N+++ YG A L G+A ++F+ M + +TY ++ +YG +A
Sbjct: 141 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 200
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ E+ G + T + ++ + G A +LF+ + GV D ++ + AY
Sbjct: 201 NLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY 260
Query: 441 TKANMKELVQKLLKRMEQNGIVP 463
+A + ++LL +++ +P
Sbjct: 261 ERAGLVAHAKRLLHELKRPDNIP 283
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 141/340 (41%), Gaps = 42/340 (12%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L SEM+ +G P+ + Y+ L+T ++
Sbjct: 32 KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVEN--- 88
Query: 197 AKALAKALGYFQKMK--------------------------------GMER--CKPNIVT 222
K +AL F +M+ GM + +PN+V+
Sbjct: 89 -KKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 147
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
YN LLR A + LF+ + + ++ TYN +M YGK ++ +++ M+
Sbjct: 148 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQ 207
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
S +P+ IT++ +I +GK D+ +F+ L S + F +MI+ Y +A L
Sbjct: 208 SRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVA 267
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
A+ + ++ P I + I + + A +F + G+ ++ M+
Sbjct: 268 HAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKXITVFERMI 323
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+ +F+ +G PDS ++ AY K
Sbjct: 324 HLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGK 363
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 119/250 (47%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
++V Y+ L+ + + + ++F L S PD+ YN +++ +GK + +E S++
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
S MK+ P+ +++ L+ Y + + F + VF + K L T N MI YG+
Sbjct: 64 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
+ +A+ +F M M P+ ++Y ++ +YG + A +F + + + V T
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 183
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N+M+ Y +A+ L + + G+ P+S TY + + K + L +++
Sbjct: 184 NSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRS 243
Query: 459 NGIVPNKRFF 468
+G+ ++ F
Sbjct: 244 SGVEIDQILF 253
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 130/301 (43%), Gaps = 37/301 (12%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
++ K+L+ L VF M++ + + D + +I V G+ G + A LF MR G P+
Sbjct: 87 ENKKFLEALSVFSEMREIKCLL-DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 145
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
YN L+ + A+ +A+ F+ M+ + + N+VTYN ++ + ++ N
Sbjct: 146 VSYNTLLRVY----GDAELFGEAIHLFRLMQ-RKNIEQNVVTYNSMMMIYGKTLEHEKAN 200
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
L +E+ + P+ TY+ ++ +GK G + + +++S+ + D I F +I +Y
Sbjct: 201 NLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY 260
Query: 301 --------GKRQAFD--------------------KMEQ---VFKSLMHSKEKPTLPTFN 329
KR + ++E+ VF+ + + E + F
Sbjct: 261 ERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKXITVFE 320
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
MI K + VF KM + Y P ++ YG +A +++ E+ ++
Sbjct: 321 RMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEV 380
Query: 390 G 390
G
Sbjct: 381 G 381
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 163/387 (42%), Gaps = 12/387 (3%)
Query: 85 VLMRSFS-----DKEPLVRTLNKYVKVVRSEHCFL-LFEELGKSDKWLQCLEVFRWMQKQ 138
+L+RSF+ D + K + H FL L + L K+ + EVF M
Sbjct: 159 ILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAM 218
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
+ D +++ ++ + K + + A +F +M G PD YN +I KA
Sbjct: 219 GFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDG----LAKAG 274
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
+AL M + C P VTY IL+ + +A +++ LF+ + S P+ Y
Sbjct: 275 HAQEALKVLDNMLA-KACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIY 333
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
++ + K+G +KE S+ M +PD+IT ++ID K F++ + F+ +M
Sbjct: 334 TSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMR 393
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
KP + T+ ++I K A + + M A P +TY C++ + +
Sbjct: 394 GGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDE 453
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNG-LPTEADLLFENSHNMGVTPDSSTYKLLY 437
A ++ DEL K + +++++ C G + D LFE S D +
Sbjct: 454 AAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSII 513
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPN 464
K + ++ +RM G P+
Sbjct: 514 VGLCKTGRLDEACRIFQRMVSEGCKPD 540
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 156/390 (40%), Gaps = 38/390 (9%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
+ FRW +Q + D Y+ L+ ++ + + EM +G P+ +N LI
Sbjct: 103 ISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIR 162
Query: 189 AHLHTRDKAKALA-------------------------------KALGYFQKMKGMERCK 217
+ TR A+ KA F +M M
Sbjct: 163 SFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVP 222
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+ + ++R +A+ V + +F ++ + PD YN ++D K G +E V
Sbjct: 223 PDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKV 282
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L M + C P +T+ +L++S K ++ E++F+ + S +P + S+I + K
Sbjct: 283 LDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAK 342
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
+ +A +F +M Y P IT+ +I N +A + F+E+ + G V T
Sbjct: 343 SGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVT 402
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
+++ G A + + G PDS TY L + K + +LL ++
Sbjct: 403 YTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELD 462
Query: 458 QNGIVPNKRFFLEALETFSSSLAGSQSGSA 487
+ PN L+ +SS + G G +
Sbjct: 463 KCSSSPN-------LQLYSSLVKGLCDGGS 485
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 154/394 (39%), Gaps = 54/394 (13%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L L K+ + E+FR M + ++ IY+ LI K G+ + A LF EM
Sbjct: 300 ILVNSLCKAGTLERAEELFRVMAAS-GFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVE 358
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
+G RPD + +I + + +A A + + M+G CKPN+VTY +++ ++
Sbjct: 359 AGYRPDVITHTVMIDGLCKSGNFEQA---AKSFEEMMRG--GCKPNVVTYTTIIQGLSKI 413
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
V + K + PD TY ++D + K G + E +L + P++ +
Sbjct: 414 GRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLY 473
Query: 294 --------------NLLIDSYGKRQA----------------------FDKMEQVFKSLM 317
N L D + + +A D+ ++F+ ++
Sbjct: 474 SSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMV 533
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVF---QKMTAMKYTPSFITYE--CIITMYGY 372
KP T+N +I ++R + + E F + + Y P +TY CI G
Sbjct: 534 SEGCKPDATTYNILINGLCRSR-ENRVERAFALLHDLEMVGYLPDAVTYTPLCI----GL 588
Query: 373 C--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
C V RA ++ +E S G + V A+ C G A LF+ G PD+
Sbjct: 589 CKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDA 648
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ Y + K E K M G P
Sbjct: 649 AAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPT 682
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 136/337 (40%), Gaps = 11/337 (3%)
Query: 147 IYSKLIAVMGKKGQTRLAMW-LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALG 205
+YS L+ + G + LF + + + DP + ++I K L +A
Sbjct: 472 LYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLC----KTGRLDEACR 527
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARN--VDQVNALFKELHESILAPDIYTYNGVMD 263
FQ+M E CKP+ TYNIL+ ++R V++ AL +L PD TY +
Sbjct: 528 IFQRMVS-EGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCI 586
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K G + +L S D++ + L + D+ +F+ ++ P
Sbjct: 587 GLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAP 646
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ +I K + A F +M P+ TY ++ + NV A F
Sbjct: 647 DAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRF 706
Query: 384 DELSKLGKDM-KVSTLNAMLEAYCMNGLPTEADL-LFENSHNMGVTPDSSTYKLLYKAYT 441
+ + G+ + V +A++ +C L +A L LFE+ + G P + T L+
Sbjct: 707 EGMLARGELVGSVMIYDALIHGFC-KALKVDAALKLFEDMISRGNVPTAVTSASLFDGLV 765
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
++ E Q+LL+ M G P+ F L+ S
Sbjct: 766 RSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKS 802
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 134/318 (42%), Gaps = 11/318 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D G+ +I + K G+ A +F M + GC+PD + YN LI +R+ A A
Sbjct: 505 DPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFA 564
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L + +M G P+ VTY L + VD+ + +E D+ Y +
Sbjct: 565 LLHDLEMVGY---LPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCT 621
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
G + S+ M PD + +I+ K + + + F ++ +KP
Sbjct: 622 GLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKP 681
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAM-KYTPSFITYECIITMYGYCD--NVSRAR 380
T+ T+ +++ A +A + F+ M A + S + Y+ +I +G+C V A
Sbjct: 682 TVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALI--HGFCKALKVDAAL 739
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
++F+++ G T ++ + +G +A L + G P ++T+ +
Sbjct: 740 KLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGL 799
Query: 441 TKANMKELVQKLLKRMEQ 458
K++ KLLK +++
Sbjct: 800 RKSDES---GKLLKLVQE 814
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 131/320 (40%), Gaps = 37/320 (11%)
Query: 182 VYNALITAHLHTRDKA-KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
V+ ++ +H+ ++ K A+ +F+ + ++ TYN L+ +N Q
Sbjct: 80 VHGQVLGSHVAAVLRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCY 139
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
A+ +E+ ++ +AP+ +++N ++ ++ + + + MK +CKPD+ TF +L+D
Sbjct: 140 AIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCL 199
Query: 301 GKRQAFDKMEQVFKSLM-----------HSK---------------------EKPTLP-- 326
K +K +VF +M H+ EK P
Sbjct: 200 CKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPD 259
Query: 327 --TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+N+MI KA +A V M A P+ +TY ++ + RA E+F
Sbjct: 260 AIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFR 319
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
++ G +++ + +G EA LF+ G PD T+ ++ K+
Sbjct: 320 VMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSG 379
Query: 445 MKELVQKLLKRMEQNGIVPN 464
E K + M + G PN
Sbjct: 380 NFEQAAKSFEEMMRGGCKPN 399
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 150/345 (43%), Gaps = 9/345 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y++LI + + G+ A+ LF M++ C P+ Y ALI K + KA+G
Sbjct: 261 YNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCR-----KNVHKAMGLL 315
Query: 208 QKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+M +ER P+++TYN L+ +A ++D L + E L PD TY +D
Sbjct: 316 DEM--LERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLC 373
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K+ ++E + + ++I +++LID Y K D+ +F+ ++ P
Sbjct: 374 KSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAY 433
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
TFN++I A +A +F +M M P+ T+ +I + A + ++
Sbjct: 434 TFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKM 493
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
G+ T NA +E YC G EA+ + GV PD TY L KAY K +
Sbjct: 494 MSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLT 553
Query: 447 ELVQKLLKRMEQNGIVPNKRFFLEAL-ETFSSSLAGSQSGSAKTD 490
+LK M P+ FL + + F +SG +
Sbjct: 554 YSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVE 598
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 152/368 (41%), Gaps = 50/368 (13%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+R + D Y+ LIA + G A L S M+ G PD Y I K+
Sbjct: 320 ERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLC----KS 375
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+ +A F + E N++ Y++L+ + VD+ LF+++ +P+ YT
Sbjct: 376 NRVEEARRLFDSLTE-EGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYT 434
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
+N ++ G +KE S+ +M KP + TFN+LI K+ FD + + +M
Sbjct: 435 FNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMM 494
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGY----- 372
S EKP T+N+ I Y A +AE + +M P TY +I YG
Sbjct: 495 SSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTY 554
Query: 373 -------------CDN-----VSRAREIFDE--------------LSKLGKDMKVSTLNA 400
C+ +S +++FD+ +S G D+ S +
Sbjct: 555 SAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFG-DVPGSNMWK 613
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
M+E + E LFE G TPDS Y+ L K + KLL +M++ G
Sbjct: 614 MMEF----DIVIE---LFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEG 666
Query: 461 IVPNKRFF 468
I P++ F
Sbjct: 667 ISPSEMVF 674
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 171/421 (40%), Gaps = 80/421 (19%)
Query: 108 RSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWL 167
R+ CF+ F L KS++ + +F + ++ A+ +YS LI K G+ A L
Sbjct: 363 RTYGCFIDF--LCKSNRVEEARRLFDSLTEE-GVSANVIMYSVLIDGYCKVGKVDEAGCL 419
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
F +M + C P+ +NALI H A L +AL F +M M KP + T+NIL+
Sbjct: 420 FEKMLSKNCSPNAYTFNALI----HGLCSAGNLKEALSLFDQMVKMGL-KPTVYTFNILI 474
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
+ + D + +++ S P TYN ++ Y G ++E E ++ +MK
Sbjct: 475 GRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVP 534
Query: 288 PDIITFNLLIDSYGK----RQAFDKMEQVFKSLMHSKEKPTLPTFNSMI----------- 332
PD T+ LI +YGK AFD V KS+ + +P+ TF S+I
Sbjct: 535 PDDFTYTSLIKAYGKLGLTYSAFD----VLKSMFDADCEPSHHTFLSLIKQLFDKRYVVE 590
Query: 333 ----------INYGK---ARLQGKAEY-----VFQKMTAMKYTPSFITYECIITMYGYCD 374
N+G + + E+ +F++M TP YE +I+ +
Sbjct: 591 KSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVE 650
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYC---------------------------- 406
N+ A ++ D++ K G NA++ C
Sbjct: 651 NLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCK 710
Query: 407 --MNGLPTEADL-----LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
+ GL E + +F+ G D +K+L K + E +L + ME+N
Sbjct: 711 TLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKN 770
Query: 460 G 460
G
Sbjct: 771 G 771
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 143/338 (42%), Gaps = 16/338 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++ +I V K G + A +M +G PD + I + ++D + A
Sbjct: 191 DIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKD----VDSA 246
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F++M N V+YN L+ +A +D+ +LF + + P++YTY ++
Sbjct: 247 FRVFEEMPNR-----NEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIK 301
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ + K M +L M PD+IT+N LI + D ++ SLM KE+
Sbjct: 302 GLCRKNVHKAM-GLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLL-SLM--KERG 357
Query: 324 TLP---TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P T+ I K+ +A +F +T + + I Y +I Y V A
Sbjct: 358 LVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAG 417
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+F+++ T NA++ C G EA LF+ MG+ P T+ +L
Sbjct: 418 CLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRM 477
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
K + K L++M +G P R + +E + S+
Sbjct: 478 LKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSA 515
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 117/258 (45%), Gaps = 7/258 (2%)
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+KM + K ++ YN LL A+ VD++N L+ E+ E ++ DIYT+N +++ Y K
Sbjct: 145 RKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCK 204
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G +KE + + +M PD T I Y + + D +VF+ + + E +
Sbjct: 205 MGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNEV----S 260
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC-DNVSRAREIFDEL 386
+N +I +A +A +F +M P+ TY +I G C NV +A + DE+
Sbjct: 261 YNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIK--GLCRKNVHKAMGLLDEM 318
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
+ + T N+++ C G A L G+ PD TY K+N
Sbjct: 319 LERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRV 378
Query: 447 ELVQKLLKRMEQNGIVPN 464
E ++L + + G+ N
Sbjct: 379 EEARRLFDSLTEEGVSAN 396
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 75/170 (44%), Gaps = 10/170 (5%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
+E+F M+K D+ Y KLI+ + K +A+ L +M+ G P V+NA+I+
Sbjct: 621 IELFEEMEKHGC-TPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVIS 679
Query: 189 --AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
L +A + + + +E CK L+ + ++ N++FK+L
Sbjct: 680 CCCKLQKYGEAANIVEDMICSGHSPQLEHCK-------TLICGLYEEGETERGNSVFKKL 732
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
D + ++D K G+++E + M+ N C T+++L
Sbjct: 733 RGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSIL 782
>gi|299473436|emb|CBN77833.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1139
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 120/253 (47%), Gaps = 8/253 (3%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+P IVT++ L+ R V F+E+ E+ + PD+ N +++A+ K G +
Sbjct: 126 RPTIVTFSTLISRAGACRRVRLAERFFREMLEAGITPDVQAINSLINAFAKAGSPDQALK 185
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
V +M P +ITFN LID+ G+ D+ QVF L + P TF+++I ++
Sbjct: 186 VFDQMSRYGVTPSVITFNTLIDACGRAGDIDRARQVFSRLSQAGLSPNDRTFSALIHSHA 245
Query: 337 KARLQGKAEYVF---QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
+QG+ + F Q+M A P+ +TY +I G ++RA + DE+ G +
Sbjct: 246 ---VQGQVDEAFSWLQEMRARGLEPNRVTYSALINACGRAGQLARAFQTLDEMFGTGIEP 302
Query: 394 KVSTLNAMLEAYCMNGLPTEADL-LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
V T +++A C G E LF+ G P+ T L A KA+ +L +
Sbjct: 303 NVVTWTTLIDA-CGKGKELEWSFKLFKEMRERGTVPNGVTCSALMDACLKADELDLAFAV 361
Query: 453 LKRMEQNGIVPNK 465
L+ M GI P +
Sbjct: 362 LEHMLDVGIEPTE 374
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 145/312 (46%), Gaps = 14/312 (4%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQ--KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFS 169
C + LG + + C+ + M + R I +S LI+ G + RLA F
Sbjct: 97 CNVFLRALGDAGRIDDCVAAYEAMLACQLRPTIV---TFSTLISRAGACRRVRLAERFFR 153
Query: 170 EMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK--GMERCKPNIVTYNILL 227
EM +G PD N+LI A KA + +AL F +M G+ P+++T+N L+
Sbjct: 154 EMLEAGITPDVQAINSLINAFA----KAGSPDQALKVFDQMSRYGV---TPSVITFNTLI 206
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
AC +A ++D+ +F L ++ L+P+ T++ ++ ++ G + E S L M++ +
Sbjct: 207 DACGRAGDIDRARQVFSRLSQAGLSPNDRTFSALIHSHAVQGQVDEAFSWLQEMRARGLE 266
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P+ +T++ LI++ G+ + Q + + +P + T+ ++I GK + + +
Sbjct: 267 PNRVTYSALINACGRAGQLARAFQTLDEMFGTGIEPNVVTWTTLIDACGKGKELEWSFKL 326
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F++M P+ +T ++ D + A + + + +G + T ++L
Sbjct: 327 FKEMRERGTVPNGVTCSALMDACLKADELDLAFAVLEHMLDVGIEPTEVTYTSLLTQCAR 386
Query: 408 NGLPTEADLLFE 419
G A ++ +
Sbjct: 387 LGQADRAGIVLD 398
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%)
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N + A G G I + + M + Q +P I+TF+ LI G + E+ F+ ++
Sbjct: 98 NVFLRALGDAGRIDDCVAAYEAMLACQLRPTIVTFSTLISRAGACRRVRLAERFFREMLE 157
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
+ P + NS+I + KA +A VF +M+ TPS IT+ +I G ++ R
Sbjct: 158 AGITPDVQAINSLINAFAKAGSPDQALKVFDQMSRYGVTPSVITFNTLIDACGRAGDIDR 217
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
AR++F LS+ G T +A++ ++ + G EA + G+ P+ TY L
Sbjct: 218 ARQVFSRLSQAGLSPNDRTFSALIHSHAVQGQVDEAFSWLQEMRARGLEPNRVTYSALIN 277
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPN 464
A +A + L M GI PN
Sbjct: 278 ACGRAGQLARAFQTLDEMFGTGIEPN 303
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%)
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
S ++ +P N + G A ++ M A + P+ +T+ +I+ G C V
Sbjct: 88 SPKQGGVPACNVFLRALGDAGRIDDCVAAYEAMLACQLRPTIVTFSTLISRAGACRRVRL 147
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A F E+ + G V +N+++ A+ G P +A +F+ GVTP T+ L
Sbjct: 148 AERFFREMLEAGITPDVQAINSLINAFAKAGSPDQALKVFDQMSRYGVTPSVITFNTLID 207
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
A +A + +++ R+ Q G+ PN R F
Sbjct: 208 ACGRAGDIDRARQVFSRLSQAGLSPNDRTF 237
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 167 LFSEMRNSGCRPDPSVYNALIT--AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYN 224
+F EMR+ G RPD YNAL+ A L D+A + + + + G++ P+ VTY
Sbjct: 881 VFQEMRSRGVRPDLRAYNALVNTCADLGEFDRALGVVRLMVDDGEGGGLQ---PDAVTYT 937
Query: 225 ILLRACAQA--RNVDQVNALFKELHE 248
L++A A+A V++ +F + +
Sbjct: 938 SLIKAAARAVPPRVEEAEEIFATMQQ 963
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 148/313 (47%), Gaps = 5/313 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + K G+TR A+ L + + RP+ +YN +I K K + +A +
Sbjct: 118 YATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLC----KDKLVNEAYDLY 173
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M PN++TY+ L+ A + + L E+ + P++YTY +MDA K
Sbjct: 174 SEMDA-RGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCK 232
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G +KE +++L+ M KP+++++N L+D Y +Q+F +++ P + +
Sbjct: 233 EGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYS 292
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N MI K++ +A + +++ P+ +TY +I + ++ A ++ E+
Sbjct: 293 YNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMY 352
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G+ V T ++L+A C N +A LF G+ P+ TY L K +
Sbjct: 353 HRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHK 412
Query: 448 LVQKLLKRMEQNG 460
QKL + + G
Sbjct: 413 NAQKLFQHLLVKG 425
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 141/322 (43%), Gaps = 5/322 (1%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ +I + K A L+SEM G P+ Y+ LI A L +A G
Sbjct: 152 MYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFC----LAGQLMEAFGL 207
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+M ++ PN+ TY IL+ A + V + L + + + P++ +YN +MD Y
Sbjct: 208 LNEMI-LKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYC 266
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
G ++ + + M P++ ++N++ID K + D+ + + ++H P
Sbjct: 267 LIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTV 326
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T++S+I + K A + ++M +TY ++ N+ +A +F ++
Sbjct: 327 TYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKM 386
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
+ G T A+++ C G A LF++ G + TY ++ K M
Sbjct: 387 KERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGML 446
Query: 447 ELVQKLLKRMEQNGIVPNKRFF 468
+ + +ME+NG +P+ F
Sbjct: 447 DEALAMKSKMEENGCIPDAVTF 468
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 135/320 (42%), Gaps = 9/320 (2%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
R + YS LI GQ A L +EM P+ Y L+ A L K K
Sbjct: 179 RGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDA-LCKEGKVK 237
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
L K E KPN+V+YN L+ V +F + + + P++Y+Y
Sbjct: 238 EAKNLLAVMTK----EGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSY 293
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N ++D K+ + E ++L + P+ +T++ LID + K + K + H
Sbjct: 294 NIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYH 353
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV-- 376
+ + T+ S++ K + KA +F KM P+ TY +I G C
Sbjct: 354 RGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALID--GLCKGGRH 411
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
A+++F L G + V T N M+ C G+ EA + G PD+ T++++
Sbjct: 412 KNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEII 471
Query: 437 YKAYTKANMKELVQKLLKRM 456
++ + + + +KLL M
Sbjct: 472 IRSLFEKDQNDKAEKLLHEM 491
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/332 (19%), Positives = 137/332 (41%), Gaps = 13/332 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++K++ + K A+ LF +M+ G PD N LI H + LG
Sbjct: 13 FNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFT-VLGKI 71
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP----DIYTYNGVMD 263
K+ +PN +T N L++ V + H+ ++A D +Y +++
Sbjct: 72 LKLG----YQPNTITLNTLMKGLCLKGEVKKS----LHFHDKVVAQGFQMDQVSYATLLN 123
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K G + +L ++ +P+++ +N +ID K + ++ ++ + P
Sbjct: 124 GLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFP 183
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T++++I + A +A + +M P+ TY ++ V A+ +
Sbjct: 184 NVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLL 243
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
++K G V + N +++ YC+ G A +F GV P+ +Y ++ K+
Sbjct: 244 AVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKS 303
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ LL+ + +VPN + ++ F
Sbjct: 304 KRVDEAMNLLREVLHKNMVPNTVTYSSLIDGF 335
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 117/281 (41%), Gaps = 42/281 (14%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + K+G+ + A L + M G +P+ YN L+ + + A K + +
Sbjct: 223 YTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNA--KQMFHT 280
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP-------------- 253
KG+ PN+ +YNI++ +++ VD+ L +E+ + P
Sbjct: 281 MVQKGVN---PNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCK 337
Query: 254 ---------------------DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
D+ TY ++DA KN + + ++ +MK +P+ T
Sbjct: 338 LGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYT 397
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+ LID K +++F+ L+ + + T+N MI K + +A + KM
Sbjct: 398 YTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKME 457
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
P +T+E II D +A ++ E+ + KD+
Sbjct: 458 ENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEM--IAKDL 496
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 122/288 (42%), Gaps = 41/288 (14%)
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
R P I+ +N ++ + + ++ +LFK++ + PD++T N +++ + G +
Sbjct: 5 RDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFS 64
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKR---------------QAFDKMEQV-FKSLMH 318
+VL ++ +P+ IT N L+ + Q F +M+QV + +L++
Sbjct: 65 FTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGF-QMDQVSYATLLN 123
Query: 319 S--------------------KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
+P + +N++I K +L +A ++ +M A P
Sbjct: 124 GLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFP 183
Query: 359 SFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
+ ITY +I YG+C + A + +E+ + V T +++A C G EA
Sbjct: 184 NVITYSTLI--YGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKN 241
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L GV P+ +Y L Y + +++ M Q G+ PN
Sbjct: 242 LLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPN 289
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 10/144 (6%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + L K+ + +F M K+R + Y+ LI + K G+ + A LF +
Sbjct: 366 LLDALCKNQNLDKATALFMKM-KERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVK 424
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GCR + YN +I+ K L +AL KM+ C P+ VT+ I++R+ +
Sbjct: 425 GCRINVWTYNVMISGLC----KEGMLDEALAMKSKMEE-NGCIPDAVTFEIIIRSLFEK- 478
Query: 235 NVDQVNALFKELHESILAPDIYTY 258
DQ + K LHE I A D+ +
Sbjct: 479 --DQNDKAEKLLHEMI-AKDLLRF 499
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 159/353 (45%), Gaps = 13/353 (3%)
Query: 113 FLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMR 172
F F+ + K+ + ++ LE D Y+ +I+ K Q A + + M+
Sbjct: 123 FFNFKNIEKASRVMEILESHTE--------PDVFAYNAVISGFCKVNQIEAATQVLNRMK 174
Query: 173 NSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
G PD YN +I + + R L AL ++ ++ C P ++TY IL+ A
Sbjct: 175 ARGFLPDIVTYNIMIGSLCNRR----KLGLALTVLDQLL-LDNCMPTVITYTILIEATIV 229
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+++ L +E+ L PD+YTYN ++ K GM++ +++ + S C+PD+I+
Sbjct: 230 EGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVIS 289
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N+L+ ++ + +D+ E++ + +P T++ +I + + +A V + M
Sbjct: 290 YNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMI 349
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ TP +Y+ +I+ + A I D + G + N +L A C NG
Sbjct: 350 EKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNAN 409
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+A +F MG P+ S+Y + A + ++ M GI P++
Sbjct: 410 QALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDE 462
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 144/323 (44%), Gaps = 13/323 (4%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DK 196
R + D Y+ +I M K+G A L + + + GC PD YN L+ A L+ D+
Sbjct: 246 RGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDE 305
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+ L + F + C+PN VTY+IL+ + + +D+ ++ K + E L PD Y
Sbjct: 306 GEKLVAEM--FSR-----GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTY 358
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+Y+ ++ A K G + ++ M SN C PDI+ +N ++ + K ++ ++F L
Sbjct: 359 SYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL 418
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
P + ++N+MI + +A + M + P ITY +I+ V
Sbjct: 419 RGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLV 478
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
A + D++ + G V + N +L C +A +F G P+ +TY LL
Sbjct: 479 EEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILL 538
Query: 437 YKAYTKANMK----ELVQKLLKR 455
+ A + EL L R
Sbjct: 539 IEGIGFAGWRTEAMELANSLFSR 561
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 141/328 (42%), Gaps = 9/328 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALG 205
Y+ LI +G AM L EM G PD YNA+I ++A L +L
Sbjct: 220 YTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSL- 278
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
KG C+P++++YNILLRA D+ L E+ P+ TY+ ++ +
Sbjct: 279 ---TSKG---CEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSL 332
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ G I E SVL M + PD +++ LI + K D + ++ + P +
Sbjct: 333 CRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDI 392
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
+N+++ K +A +F K+ M P+ +Y +I+ C + SRA +
Sbjct: 393 VNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPA 452
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ G D T N+++ C +GL EA L ++ G P +Y ++ K
Sbjct: 453 MISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRR 512
Query: 446 KELVQKLLKRMEQNGIVPNKRFFLEALE 473
+ + M + G PN+ ++ +E
Sbjct: 513 IDDAIGMFAEMIEKGCRPNETTYILLIE 540
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 113/249 (45%), Gaps = 5/249 (2%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+++ L++ +N+++ + + E+ ES PD++ YN V+ + K I+ V
Sbjct: 111 PDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDVFAYNAVISGFCKVNQIEAATQV 169
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L+RMK+ PDI+T+N++I S R+ V L+ PT+ T+ +I
Sbjct: 170 LNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIV 229
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKV 395
+A + ++M A P TY II G C V RA E+ L+ G + V
Sbjct: 230 EGGINEAMKLLEEMLARGLLPDMYTYNAIIR--GMCKEGMVERAAELITSLTSKGCEPDV 287
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+ N +L A+ G E + L + G P+ TY +L + + + +LK
Sbjct: 288 ISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKV 347
Query: 456 MEQNGIVPN 464
M + + P+
Sbjct: 348 MIEKELTPD 356
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/315 (18%), Positives = 133/315 (42%), Gaps = 6/315 (1%)
Query: 150 KLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQK 209
KL+ K G+ +++ + N G PD + LI + ++ KA ++ + +
Sbjct: 83 KLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKA-SRVMEILES 141
Query: 210 MKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG 269
+P++ YN ++ + ++ + + PDI TYN ++ +
Sbjct: 142 -----HTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRR 196
Query: 270 MIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFN 329
+ +VL ++ + C P +IT+ +LI++ ++ ++ + ++ P + T+N
Sbjct: 197 KLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYN 256
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
++I K + +A + +T+ P I+Y ++ + ++ E+
Sbjct: 257 AIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR 316
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
G + T + ++ + C G EA + + +TPD+ +Y L A K +L
Sbjct: 317 GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA 376
Query: 450 QKLLKRMEQNGIVPN 464
++ M NG +P+
Sbjct: 377 IGIMDYMISNGCLPD 391
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 1/213 (0%)
Query: 253 PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
PD+ ++ + I++ V+ ++S+ +PD+ +N +I + K + QV
Sbjct: 111 PDVILCTKLIKGFFNFKNIEKASRVMEILESHT-EPDVFAYNAVISGFCKVNQIEAATQV 169
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGY 372
+ P + T+N MI + R G A V ++ P+ ITY +I
Sbjct: 170 LNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIV 229
Query: 373 CDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
++ A ++ +E+ G + T NA++ C G+ A L + + G PD +
Sbjct: 230 EGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVIS 289
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
Y +L +A+ + +KL+ M G PNK
Sbjct: 290 YNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 322
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 154/361 (42%), Gaps = 53/361 (14%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT---RDKAKAL 200
D +Y+ +I + K G A+ LF +M N G RPD +Y +L+ ++ RD L
Sbjct: 176 DVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLL 235
Query: 201 AKALGYFQKMKGM--ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
+GM + KP+++T+N L+ A + L+ E+ +AP+I+TY
Sbjct: 236 ----------RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTY 285
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
+++ + G + E + M++ C PD++ + LI+ + K + D ++F +
Sbjct: 286 TSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ 345
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
T+ ++I +G+ A+ VF M + P+ TY ++ Y V +
Sbjct: 346 KGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKK 405
Query: 379 AREIFDELSKLGKDM---KVSTLNAMLEAYCMNGLPTEADLLFE---------------- 419
A IF+++ K D + T N +L C NG +A ++FE
Sbjct: 406 ALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTI 465
Query: 420 ------------NSHNM-------GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
N+ N+ GV P+ TY + + +K L ++M+++G
Sbjct: 466 IIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Query: 461 I 461
+
Sbjct: 526 V 526
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 139/308 (45%), Gaps = 8/308 (2%)
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
Q LA +M G PD + +LI + +A+ +M M KP+
Sbjct: 122 QPYLASSFLGKMMKLGFEPDIVTFTSLINGFC----LGNRMEEAMSMVNQMVEMG-IKPD 176
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+V Y ++ + + +V+ +LF ++ + PD+ Y +++ +G ++ +S+L
Sbjct: 177 VVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLR 236
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
M + KPD+ITFN LID++ K F E+++ ++ P + T+ S+I +
Sbjct: 237 GMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEG 296
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLN 399
+A +F M P + Y +I + C V A +IF E+S+ G T
Sbjct: 297 CVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYT 356
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT---KANMKELVQKLLKRM 456
+++ + G P A +F + + GV P+ TY +L K ++ + +++
Sbjct: 357 TLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKR 416
Query: 457 EQNGIVPN 464
E +G+ PN
Sbjct: 417 EMDGVAPN 424
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 164/374 (43%), Gaps = 23/374 (6%)
Query: 97 VRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWY--IADTGIYSKLIAV 154
VR Y +++R+ L F E L++F M + R I D ++KL+ V
Sbjct: 34 VRAFCNYREILRNGLHSLQFNE---------ALDLFTHMVESRPLPSIID---FTKLLNV 81
Query: 155 MGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME 214
+ K + + + L ++ G D N L+ + A + LG K+ G E
Sbjct: 82 IAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLA-SSFLGKMMKL-GFE 139
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
P+IVT+ L+ +++ ++ ++ E + PD+ Y ++D+ KNG +
Sbjct: 140 ---PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYA 196
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
S+ +M++ +PD++ + L++ + + + + + K KP + TFN++I
Sbjct: 197 LSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDA 256
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKD 392
+ K AE ++ +M M P+ TY +I G+C V AR++F + G
Sbjct: 257 FVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN--GFCMEGCVDEARQMFYLMETKGCF 314
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
V +++ +C +A +F G+T ++ TY L + + + + Q++
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Query: 453 LKRMEQNGIVPNKR 466
M G+ PN R
Sbjct: 375 FSHMVSRGVPPNIR 388
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 136/316 (43%), Gaps = 11/316 (3%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ LF+ M S RP PS+ + T L+ K K + ++ M ++ T
Sbjct: 56 ALDLFTHMVES--RPLPSIID--FTKLLNVIAKMKKFDVVINLCDHLQIMG-VSHDLYTC 110
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
N+L+ Q+ ++ ++ + PDI T+ +++ + ++E S++++M
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI---INYGKARL 340
KPD++ + +IDS K + +F + + +P + + S++ N G+ R
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR- 229
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
A+ + + MT K P IT+ +I + A E+++E+ ++ + T +
Sbjct: 230 --DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
++ +CM G EA +F G PD Y L + K + K+ M Q G
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Query: 461 IVPNKRFFLEALETFS 476
+ N + ++ F
Sbjct: 348 LTGNTITYTTLIQGFG 363
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 110/275 (40%), Gaps = 44/275 (16%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIA-DTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
L + K K+L E++ M R IA + Y+ LI +G A +F M
Sbjct: 253 LIDAFVKEGKFLDAEELYNEMI--RMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMET 310
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGM------------------ 213
GC PD Y +LI K K + A+ F +M KG+
Sbjct: 311 KGCFPDVVAYTSLINGFC----KCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVG 366
Query: 214 --------------ERCKPNIVTYNILLRACAQARNVDQVNALFKELHE---SILAPDIY 256
PNI TYN+LL V + +F+++ + +AP+I+
Sbjct: 367 KPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIW 426
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TYN ++ NG +++ V M+ + IIT+ ++I K +F SL
Sbjct: 427 TYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSL 486
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
KP + T+ +MI + L+ +A +F+KM
Sbjct: 487 PSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 163/344 (47%), Gaps = 14/344 (4%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
+LQ L F W + A Y++++ + GK Q LA + M++ G ++
Sbjct: 158 FLQSLAFFNWSSSLDGFPASPEPYNEMLDLAGKLRQFDLAWHVIDLMKSRGVEITVHTFS 217
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
AL+ ++ +A A+A+ F +M+ C P++V ++I++ + + R ++ + F
Sbjct: 218 ALVRRYV----RAGLAAEAVHAFNRMEDYG-CTPDMVAFSIVISSLCKKRRANEAQSFFD 272
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
L PD+ Y ++ + + G I + E V S MK KP++ T++++IDS +
Sbjct: 273 SLKHR-FEPDVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCG 331
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
+ VF ++ + P TFNS++ + KA K V+ +M + I+Y
Sbjct: 332 QITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYN 391
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML----EAYCMNGLPTEADLLFEN 420
II + +N+ A +I + + K G ST N + + + +NG A ++
Sbjct: 392 FIIESHCRDENLEEAAKILNLMVKKGVAPNASTFNFIFGCIAKLHDVNG----AHRMYAR 447
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ P++ TY +L + + ++ ++V K+ K M+++ + PN
Sbjct: 448 MKELNCQPNTLTYNILMRMFAESRSTDMVLKMKKEMDESQVEPN 491
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 121/267 (45%), Gaps = 1/267 (0%)
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
++L +F ++ + YN +L + R D + + + ++T++ +
Sbjct: 160 QSLAFFNWSSSLDGFPASPEPYNEMLDLAGKLRQFDLAWHVIDLMKSRGVEITVHTFSAL 219
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ Y + G+ E +RM+ C PD++ F+++I S K++ ++ + F SL H E
Sbjct: 220 VRRYVRAGLAAEAVHAFNRMEDYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLKHRFE 279
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P + + S++ + +A KAE VF M P+ TY +I C ++RA +
Sbjct: 280 -PDVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHD 338
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+F E+ G D T N+++ + G + ++ +G D+ +Y + +++
Sbjct: 339 VFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHC 398
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFF 468
+ E K+L M + G+ PN F
Sbjct: 399 RDENLEEAAKILNLMVKKGVAPNASTF 425
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 148/317 (46%), Gaps = 11/317 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +S +I+ + KK + A F +++ PD VY +L+ H +A ++KA
Sbjct: 247 DMVAFSIVISSLCKKRRANEAQSFFDSLKHR-FEPDVVVYTSLV----HGWCRAGDISKA 301
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F MK M KPN+ TY+I++ + + + + + +F E+ ++ P+ T+N +M
Sbjct: 302 EEVFSDMK-MAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMR 360
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ K G +++ V ++MK C D I++N +I+S+ + + ++ ++ ++ P
Sbjct: 361 VHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAP 420
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
TFN + K A ++ +M + P+ +TY ++ M+ + ++
Sbjct: 421 NASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRMFAESRSTDMVLKMK 480
Query: 384 DELSKLGKDMKVSTLNAMLEAYC-MNGLPTEADLLFENSHNMGVTPDSSTY----KLLYK 438
E+ + + V+T ++ +C M L+ E + P+ S Y +LL K
Sbjct: 481 KEMDESQVEPNVNTYRILISMFCDMKHWNNAYKLMMEMVEEKCLRPNLSVYETVLELLRK 540
Query: 439 AYTKANMKELVQKLLKR 455
A +ELV K++ R
Sbjct: 541 AGQLKKHEELVDKMVAR 557
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 144/300 (48%), Gaps = 8/300 (2%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
I++ L++ KG+ A + +EM GC PD +Y +LI T + +A
Sbjct: 285 IFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFST----GRVPEARHV 340
Query: 207 FQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
F M +E+ C P+ +TY +++ ++ NV+ + + + +S + PD + YN +MD Y
Sbjct: 341 FDSM--IEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGY 398
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-KPT 324
K + + V RM ++ KP+ +TFN+L+ K D+ +FK ++ +E PT
Sbjct: 399 VKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPT 458
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
L ++ +I GKA +A FQ+M P TY +I + A+++ +
Sbjct: 459 LVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVE 518
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
++ KLG + V +A++ + + A +F+ G P+ TYK+L + + A
Sbjct: 519 DMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAG 578
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 139/324 (42%), Gaps = 11/324 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I + + A LF E++ +GC P+ Y A+I L KA + L F
Sbjct: 111 YTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLL----KAGRIEDGLKNF 166
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M G C P TY +++ +A+ + +F+++ + PD TY ++D + K
Sbjct: 167 EEMSG-SSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSK 225
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ E +L M + +P +T+ ++ + K ++ ++V + +P L
Sbjct: 226 ASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFI 285
Query: 328 FNSMIINYGKARLQGKAEYVFQ---KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
F S++ Y +G+AE +Q +MTA P I Y +I + V AR +FD
Sbjct: 286 FTSLLSYY---LSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFD 342
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ + G T +++ + G A + E GV PD Y L Y K
Sbjct: 343 SMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLE 402
Query: 445 MKELVQKLLKRMEQNGIVPNKRFF 468
+ + RM +GI PN F
Sbjct: 403 RVDQAFGVYDRMVASGIKPNAVTF 426
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/331 (19%), Positives = 134/331 (40%), Gaps = 9/331 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I+ + + A F+ M ++GC PD + LI KA +G+
Sbjct: 10 YNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGF------CKAGQPQVGHK 63
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ ++R +P++ Y ++ +A ++D F+ + + D+ +Y V+
Sbjct: 64 LLNQALKRFRPDVFLYTSVIHGYCKAGDLD--TGYFRAVTPKA-SLDVISYTTVIKGLAD 120
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ I E + +K+ C P+++ + +ID K + + F+ + S PT T
Sbjct: 121 SKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTT 180
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ +I KA++ A VF++M P ITY +I + + AR++ D +
Sbjct: 181 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVML 240
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G + T +++ +C + EA + G P + L Y E
Sbjct: 241 TKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAE 300
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
++L M G P+ + ++ S+
Sbjct: 301 EAYQVLTEMTARGCAPDVILYTSLIDLLFST 331
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 122/320 (38%), Gaps = 10/320 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I + K A +F +M GC PD Y LI KA + +A
Sbjct: 181 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGF----SKASKMDEARKLL 236
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
M KG E P VTY ++ + +++ + ++ E P ++ + ++ Y
Sbjct: 237 DVMLTKGPE---PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYY 293
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
G +E VL+ M + C PD+I + LID + VF S++ P
Sbjct: 294 LSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDA 353
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+ ++I N+ K A + + M P Y ++ Y + V +A ++D
Sbjct: 354 LTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDR 413
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF-ENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ G T N ++ +G A LF E V P +Y +L KA
Sbjct: 414 MVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAG 473
Query: 445 MKELVQKLLKRMEQNGIVPN 464
+ M GI+P
Sbjct: 474 RVSEAFLQFQEMIDRGIIPE 493
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 6/224 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y +I K G A + M SG PD YN+L+ ++ K + + +A
Sbjct: 352 DALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYV----KLERVDQA 407
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE-LHESILAPDIYTYNGVM 262
G + +M KPN VT+N+L+ + D+ +LFKE L + + P + +Y ++
Sbjct: 408 FGVYDRMVA-SGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILI 466
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D GK G + E M P+ T+ LI S K + +++ + ++
Sbjct: 467 DGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVN 526
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
P + ++++I + + A VFQ+M P+ +TY+ +
Sbjct: 527 PDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 570
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/320 (20%), Positives = 136/320 (42%), Gaps = 13/320 (4%)
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC P YN +I+ L + DK + +A +F M C+P+++ + L+ +A
Sbjct: 2 GCEPTIVSYNTVISG-LASIDK---MDEAYKFFNSMID-NGCEPDVIAFTTLIHGFCKA- 55
Query: 235 NVDQVNALFKELHESI--LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
Q K L++++ PD++ Y V+ Y K G ++++ R + + D+I+
Sbjct: 56 --GQPQVGHKLLNQALKRFRPDVFLYTSVIHGYCKAG---DLDTGYFRAVTPKASLDVIS 110
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+ +I + D+ ++F+ L + P + + ++I KA F++M+
Sbjct: 111 YTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMS 170
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
P+ TY +I + A ++F+++ + G T +++ +
Sbjct: 171 GSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMD 230
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
EA L + G P + TY + + K +M ++++ +M + G P F L
Sbjct: 231 EARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLL 290
Query: 473 ETFSSSLAGSQSGSAKTDLT 492
+ S ++ T++T
Sbjct: 291 SYYLSKGRAEEAYQVLTEMT 310
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 74/164 (45%), Gaps = 20/164 (12%)
Query: 86 LMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADT 145
L + +KE + TL Y +L + LGK+ + + F+ M R I +
Sbjct: 445 LFKEMLEKEEVPPTLVSYT---------ILIDGLGKAGRVSEAFLQFQEM-IDRGIIPEC 494
Query: 146 GIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALG 205
Y+ LI + K G+ A L +M G PD Y+ALIT + + + A
Sbjct: 495 HTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDS----SMVDTAWD 550
Query: 206 YFQKMKGMER-CKPNIVTYNIL---LRACAQARNVDQVNALFKE 245
FQ+M M+R C PN VTY +L RA +A +++ V F +
Sbjct: 551 VFQEM--MKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHFSQ 592
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 9/163 (5%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
LF++ GK+D+ +F+ M ++ Y+ LI +GK G+ A F EM +
Sbjct: 433 LFKD-GKTDRAFS---LFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDR 488
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P+ Y +LI ++ KA + +A + M + P++ Y+ L+ +
Sbjct: 489 GIIPECHTYTSLI----YSLAKAGRIPEAKKLVEDMVKL-GVNPDVQAYSALITGLIDSS 543
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
VD +F+E+ + AP+ TY + + G ++E+V
Sbjct: 544 MVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAV 586
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 141/331 (42%), Gaps = 19/331 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + ++GQ R A+ + +M GC PD YN L+ +A K GY
Sbjct: 170 YNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILL----------EATCKGRGYR 219
Query: 208 QKMKGM-----ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
Q M+ + E C PN VTYN+L+ +VD L + L P YN V+
Sbjct: 220 QAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVL 279
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+ + +++ M C P+ TFN++I S ++ + Q+ + +
Sbjct: 280 KGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCT 339
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS--RAR 380
+ T+N++I + R A + KM + P +TY ++ G C A
Sbjct: 340 ANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLK--GLCSAAQWVDAE 397
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
E+ D +++ G T N ++ C GL +A +F+ + G TP+S TY +
Sbjct: 398 ELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGL 457
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
KA + +L M G P+K + L A
Sbjct: 458 AKATKLDQALELFNEMGHKGFNPDKIYQLLA 488
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 125/290 (43%), Gaps = 9/290 (3%)
Query: 177 RPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
+P+ YN LI HT + + AL M C P++VTYNILL A + R
Sbjct: 164 QPNAYTYNPLI----HTLCERGQVRDALSVLDDML-CRGCAPDVVTYNILLEATCKGRGY 218
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
Q L + P+ TYN +MD G + + +L + S+ CKP + +N +
Sbjct: 219 RQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTV 278
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
+ + + +++ ++ P TFN +I + + L +A + +KM+
Sbjct: 279 LKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGC 338
Query: 357 TPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
T + +TY II G C+ NV A + ++ G + T N +L+ C +A
Sbjct: 339 TANIVTYNAIIN--GLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDA 396
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ L +N G PD+ T+ L + + ++ K+M G PN
Sbjct: 397 EELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPN 446
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 151/370 (40%), Gaps = 35/370 (9%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
R D Y+ L+ K R AM L MR GC P+ YN L+ D
Sbjct: 196 RGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDD 255
Query: 199 AL------------AKALGYFQKMKGM------------------ERCKPNIVTYNILLR 228
AL + Y +KG+ E C PN T+N+++
Sbjct: 256 ALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIY 315
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
+ + + Q L +++ + +I TYN +++ + + +LS+MKS CKP
Sbjct: 316 SLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKP 375
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
DI+T+N L+ + E++ ++ + P TFN++I + L A VF
Sbjct: 376 DIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVF 435
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
++M TP+ ITY II+ + +A E+F+E+ K + +L A C+N
Sbjct: 436 KQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGH--KGFNPDKIYQLL-AECLN 492
Query: 409 GLPT--EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
T EA + G++P + Y + + E ++ M +G +P+
Sbjct: 493 DDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDL 552
Query: 467 FFLEALETFS 476
++ +E +
Sbjct: 553 TYVILIEGLA 562
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 124/294 (42%), Gaps = 12/294 (4%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
L +EM C P+ + +N +I ++ + L +A+ +KM C NIVTYN +
Sbjct: 294 LVTEMLRENCPPNEATFNVVI----YSLCRKGLLQQAIQLLEKMS-KHGCTANIVTYNAI 348
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+ + RNVD L ++ PDI TYN ++ + E ++ M N C
Sbjct: 349 INGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGC 408
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
PD +TFN LI ++ +VFK + P T++++I KA +A
Sbjct: 409 LPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALE 468
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+F +M + P I Y+ + D + A + +L G NA+L C
Sbjct: 469 LFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLC 527
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLL-----YKAYTKANMKELVQKLLKR 455
NG A + + G PD TY +L Y+ Y +EL+ KL R
Sbjct: 528 RNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLN-EARELLIKLCSR 580
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 142/329 (43%), Gaps = 19/329 (5%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSV--YNALITAHLHTRDKAKALA 201
D + ++L+ + ++G+ A E C P +V Y AL + A
Sbjct: 102 DAALANRLVRDLCRRGRPDDA-----ERVVGACGPAATVVAYGALTDGYCR--------A 148
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
LG +++ G +PN TYN L+ + V ++ ++ APD+ TYN +
Sbjct: 149 GRLGDARRVVGGMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNIL 208
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
++A K ++ ++ M++ C P+ +T+N+L+D D ++ ++L
Sbjct: 209 LEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGC 268
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRA 379
KP+ +N+++ A G A+ + +M P+ T+ +I Y C + +A
Sbjct: 269 KPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVI--YSLCRKGLLQQA 326
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
++ +++SK G + T NA++ C A L + G PD TY L K
Sbjct: 327 IQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKG 386
Query: 440 YTKANMKELVQKLLKRMEQNGIVPNKRFF 468
A ++L+ M QNG +P+ F
Sbjct: 387 LCSAAQWVDAEELMDNMTQNGCLPDNVTF 415
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 89/185 (48%), Gaps = 7/185 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + L + +W+ E+ M Q + D ++ LI + +KG A+ +F +M +
Sbjct: 383 LLKGLCSAAQWVDAEELMDNM-TQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDK 441
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC P+ Y+ +I+ KA L +AL F +M G + P+ + Y +L
Sbjct: 442 GCTPNSITYSTIISGLA----KATKLDQALELFNEM-GHKGFNPDKI-YQLLAECLNDDD 495
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+++ ++L +S ++P YN ++ +NG + +++ M S+ C PD +T+
Sbjct: 496 TIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYV 555
Query: 295 LLIDS 299
+LI+
Sbjct: 556 ILIEG 560
>gi|302798857|ref|XP_002981188.1| hypothetical protein SELMODRAFT_420654 [Selaginella moellendorffii]
gi|300151242|gb|EFJ17889.1| hypothetical protein SELMODRAFT_420654 [Selaginella moellendorffii]
Length = 796
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 155/331 (46%), Gaps = 7/331 (2%)
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
F+W+++Q+WY+ T +S L+ G+ + + S+++ C YN LI +
Sbjct: 122 FQWIRRQKWYVPSTYSFSILLNTYGRGKDFQAVQRVLSDLKADKCPMTTVAYNTLIKVY- 180
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KA L +A GY+++M+ RC P+I T+N L+ + A ++V ++ E+ +
Sbjct: 181 ---GKAHKLDEAWGYYKEMQD-SRCVPDIFTFNTLMSLYSYAGQSEKVLEVYDEMQKIGC 236
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
+ D Y V+ GK G + + RMK+ +P+ + ++ LI K + +
Sbjct: 237 SLDRVGYEVVVPHAGKVGRLDLACMLFERMKAEGHQPNAVAYSALIAGQLKSGRLEIGTK 296
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGK-ARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
F+ + + +P L TF S+I Y K RL+ ++ F+ M A Y P+ Y ++ +
Sbjct: 297 YFEEMRSLEIRPLLGTFASLIEAYCKSGRLETGLKF-FKDMEAFNYKPNLCIYAALVDAH 355
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
+ A E ++ + +G + ++E + G A L+ +G+ P
Sbjct: 356 AKAGMLDAALEFYERMRGVGLWLPPLIFAVLIEQHAQAGKAETAVRLYREMRGVGLRPSH 415
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
T +++ A K + V+++L M++ G+
Sbjct: 416 FTCRIVVGAVAKGGKYDDVERILFEMQEMGL 446
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 119/285 (41%), Gaps = 6/285 (2%)
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
G+FQ ++ + P+ +++ILL + ++ V + +L YN ++
Sbjct: 120 GFFQWIRRQKWYVPSTYSFSILLNTYGRGKDFQAVQRVLSDLKADKCPMTTVAYNTLIKV 179
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
YGK + E M+ ++C PDI TFN L+ Y +K+ +V+ +
Sbjct: 180 YGKAHKLDEAWGYYKEMQDSRCVPDIFTFNTLMSLYSYAGQSEKVLEVYDEMQKIGCSLD 239
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ ++ + GK A +F++M A + P+ + Y +I + + F+
Sbjct: 240 RVGYEVVVPHAGKVGRLDLACMLFERMKAEGHQPNAVAYSALIAGQLKSGRLEIGTKYFE 299
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E+ L + T +++EAYC +G F++ P+ Y L A+ KA
Sbjct: 300 EMRSLEIRPLLGTFASLIEAYCKSGRLETGLKFFKDMEAFNYKPNLCIYAALVDAHAKAG 359
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKT 489
M + + +RM G+ F +E +Q+G A+T
Sbjct: 360 MLDAALEFYERMRGVGLWLPPLIFAVLIEQH------AQAGKAET 398
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 130/326 (39%), Gaps = 45/326 (13%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L+ G+S+K LEV+ MQK + G Y ++ GK G+ LA LF M+
Sbjct: 214 LYSYAGQSEK---VLEVYDEMQKIGCSLDRVG-YEVVVPHAGKVGRLDLACMLFERMKAE 269
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G +P+ Y+ALI L K+ L YF++M+ +E +P + T+ L+ A ++
Sbjct: 270 GHQPNAVAYSALIAGQL----KSGRLEIGTKYFEEMRSLE-IRPLLGTFASLIEAYCKSG 324
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC-------- 286
++ FK++ P++ Y ++DA+ K GM+ RM+
Sbjct: 325 RLETGLKFFKDMEAFNYKPNLCIYAALVDAHAKAGMLDAALEFYERMRGVGLWLPPLIFA 384
Query: 287 ---------------------------KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
+P T +++ + K +D +E++ M
Sbjct: 385 VLIEQHAQAGKAETAVRLYREMRGVGLRPSHFTCRIVVGAVAKGGKYDDVERILFE-MQE 443
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
N I+ + A +F K+T +TP I+ + C ++ A
Sbjct: 444 MGLNVADAVNDSIVKLVDDKRISDAWELFLKVTGHGFTPHVSLCREILHGFLSCGDMEHA 503
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAY 405
R++ + + G + + T +LE +
Sbjct: 504 RQMLSFMQRPGSAVDLRTYCMLLEFF 529
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 138/318 (43%), Gaps = 4/318 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + +G+ A+ + +MR +GC P+ YN L+ A +A L A
Sbjct: 13 YNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFC----RAGELDGAERVV 68
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
M+ KPN+VT+N ++ +A ++ +F E+ LAPD+ +YN ++ Y K
Sbjct: 69 SLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCK 128
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + E +V S M PD++TF LI + K ++ + + + T
Sbjct: 129 VGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVT 188
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
F ++I + K A ++M PS + Y +I Y + ARE+ E+
Sbjct: 189 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREME 248
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
V T + ++ YC G A L + GV PD+ TY L + +
Sbjct: 249 AKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLN 308
Query: 448 LVQKLLKRMEQNGIVPNK 465
+L + M Q G+ P++
Sbjct: 309 DACELFENMLQLGVQPDE 326
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 152/321 (47%), Gaps = 13/321 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ ++ + K G+ A +F EM G PD YN L++ + K L ++L F
Sbjct: 84 FNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC----KVGCLHESLAVF 139
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M +G+ P++VT+ L+ A +A N++Q AL ++ E L + T+ ++D +
Sbjct: 140 SEMTQRGL---VPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGF 196
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G + + + M+ +P ++ +N LI+ Y K D ++ + + + KP +
Sbjct: 197 CKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDV 256
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIF 383
T++++I Y K A + QKM P ITY +I G C+ ++ A E+F
Sbjct: 257 VTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIR--GLCEEKRLNDACELF 314
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ + +LG T +++ +C G +A L + GV PD TY +L +K+
Sbjct: 315 ENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKS 374
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+ +LL ++ VP+
Sbjct: 375 ARTKEAHRLLFKLYHEDPVPD 395
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 131/266 (49%), Gaps = 10/266 (3%)
Query: 218 PNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
PN+ TYNIL+RA CA+ R +++ + ++ + AP+ TYN ++ A+ + G + E
Sbjct: 8 PNVYTYNILVRALCARGR-LEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAER 66
Query: 277 VLSRMK-SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
V+S M+ KP+++TFN +++ K + +VF ++ P + ++N+++ Y
Sbjct: 67 VVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGY 126
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
K ++ VF +MT P +T+ +I N+ +A + ++ + G M
Sbjct: 127 CKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNE 186
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
T A+++ +C G +A L E G+ P Y L Y K +L ++L++
Sbjct: 187 VTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIRE 246
Query: 456 MEQNGIVPNKRFFLEALETFSSSLAG 481
ME + P+ + T+S+ ++G
Sbjct: 247 MEAKRVKPD-------VVTYSTIISG 265
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 175/394 (44%), Gaps = 27/394 (6%)
Query: 73 KSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVF 132
++ EL+ E V LMR + +P + T N V L K+ + +VF
Sbjct: 57 RAGELDGAERVVSLMREEGNAKPNLVTFNSMVN------------GLCKAGRMEGARKVF 104
Query: 133 RWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH 192
M ++ D Y+ L++ K G ++ +FSEM G PD + +LI H
Sbjct: 105 DEMVRE-GLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLI----H 159
Query: 193 TRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KA L +A+ +M+ ER + N VT+ L+ + +D +E+ + +
Sbjct: 160 ATCKAGNLEQAVALVAQMR--ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGI 217
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
P + YN +++ Y K G + ++ M++ + KPD++T++ +I Y K D Q
Sbjct: 218 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 277
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+ + ++ P T++S+I + + A +F+ M + P TY +I G
Sbjct: 278 LNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLID--G 335
Query: 372 YC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD-LLFENSHNMGVTP 428
+C NV +A + DE+ + G V T + ++ + EA LLF+ H V P
Sbjct: 336 HCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPV-P 394
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
D+ Y L +KA K +V LLK G++
Sbjct: 395 DNIKYDALMLCCSKAEFKSVVA-LLKGFCMKGLM 427
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1080
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 157/339 (46%), Gaps = 8/339 (2%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ LEV+R M + YS L+ GK+ +WL EM G +P+ Y
Sbjct: 178 EALEVYRVMMVD-GVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSY--- 233
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
T + +AK +A KM+ E CKP+++T+ +L++ A + +F ++
Sbjct: 234 -TICIRVLGQAKRFDEAYRILAKMEN-EGCKPDVITHTVLIQVLCDAGRISDAKDVFWKM 291
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK-RQA 305
+S PD TY ++D +G NG + + + + MK++ +++ + +ID+ + +
Sbjct: 292 KKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRV 351
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
F+ +E +F + P ++NS+I + KA G A +F+ M P+ T+
Sbjct: 352 FEALE-MFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVL 410
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
I YG +A + ++ + G V NA+L +G A +F MG
Sbjct: 411 FINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMG 470
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
V+PD+ TY ++ K +KA+ + K+ M +N VP+
Sbjct: 471 VSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPD 509
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 159/358 (44%), Gaps = 10/358 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + L K K L+ E+ + K TG+Y+ LI + + +A LF+EM+
Sbjct: 726 LIKHLCKQKKALEAHELVKKF-KSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKEL 784
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQ 232
GC PD YN L+ A K+ + + L ++M KG E VTYN ++ +
Sbjct: 785 GCGPDEFTYNLLLDA----MGKSMRIEEMLKVQEEMHRKGYES---TYVTYNTIISGLVK 837
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+R ++Q L+ L +P TY ++D K G I++ E++ + M CK +
Sbjct: 838 SRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTI 897
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N+L++ + +K+ +F+ ++ P + ++ +I KA F+++
Sbjct: 898 YNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLL 957
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
M P ITY +I G + A +F+E+ K G + T N+++ G
Sbjct: 958 EMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAA 1017
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
EA ++E G P+ TY L + Y+ + + RM G +PN +++
Sbjct: 1018 EAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSSTYMQ 1075
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 130/258 (50%), Gaps = 8/258 (3%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
LL + +GKS + + L+V M + + Y + Y+ +I+ + K + A+ L+ + +
Sbjct: 795 LLLDAMGKSMRIEEMLKVQEEMHR-KGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMS 853
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME-RCKPNIVTYNILLRACAQ 232
G P P Y L+ L KA + A F +M +E CK N YNILL
Sbjct: 854 QGFSPTPCTYGPLLDGLL----KAGRIEDAENLFNEM--LEYGCKANCTIYNILLNGHRI 907
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
A N ++V LF+++ + + PDI +Y ++D K G + + + ++ +PD+IT
Sbjct: 908 AGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLIT 967
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+NLLID GK + ++ +F + P L T+NS+I++ GKA +A +++++
Sbjct: 968 YNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELL 1027
Query: 353 AMKYTPSFITYECIITMY 370
+ P+ TY +I Y
Sbjct: 1028 TKGWKPNVFTYNALIRGY 1045
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 157/338 (46%), Gaps = 12/338 (3%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
EVF MQ+Q A+ G ++ + +G +G R A M+ +G + YN L+
Sbjct: 111 EVFDVMQRQ-IVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLV-- 167
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ K+ +AL ++ M ++ P++ TY++L+ A + R+V+ V L +E+
Sbjct: 168 --YFLVKSGFDREALEVYRVMM-VDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAH 224
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+ P++Y+Y + G+ E +L++M++ CKPD+IT +LI
Sbjct: 225 GVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDA 284
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECI 366
+ VF + S +KP T+ +++ +G G ++ V + AMK Y + + Y +
Sbjct: 285 KDVFWKMKKSDQKPDRVTYITLLDKFGD---NGDSQSVMEIWNAMKADGYNDNVVAYTAV 341
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I V A E+FDE+ + G + + N+++ + +A LF++ G
Sbjct: 342 IDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGP 401
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
P+ T+ L Y K+ + + M+ GIVP+
Sbjct: 402 KPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPD 439
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 144/329 (43%), Gaps = 8/329 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L ++ G + +E++ M K Y + Y+ +I + + G+ A+ +F EM+
Sbjct: 306 LLDKFGDNGDSQSVMEIWNAM-KADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQK 364
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P+ YN+LI+ L KA AL F+ M + KPN T+ + + ++
Sbjct: 365 GIVPEQYSYNSLISGFL----KADRFGDALELFKHMD-IHGPKPNGYTHVLFINYYGKSG 419
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ ++ + + PD+ N V+ K+G + + V +K+ PD IT+
Sbjct: 420 ESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYT 479
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++I K FD+ ++F ++ + P + NS+I KA +A +F ++ M
Sbjct: 480 MMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEM 539
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P+ TY ++ G V + +E+ + T N +L+ C NG +A
Sbjct: 540 NLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDA 599
Query: 415 -DLLFENSHNMGVTPDSSTYKLLYKAYTK 442
D+L+ + G PD S+Y + K
Sbjct: 600 LDMLYSMTTK-GCIPDLSSYNTVIYGLVK 627
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 168/429 (39%), Gaps = 61/429 (14%)
Query: 82 LVRVLMRSFSDKEPL----VRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQK 137
LV L++S D+E L V ++ V VR+ ++ GK L + R M+
Sbjct: 166 LVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMV--AFGKRRDVETVLWLLREMEA 223
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+ Y+ I V+G+ + A + ++M N GC+PD + LI A
Sbjct: 224 H-GVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLC----DA 278
Query: 198 KALAKALGYFQKMKGMERCKP-----------------------------------NIVT 222
++ A F KMK ++ KP N+V
Sbjct: 279 GRISDAKDVFWKMKKSDQ-KPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVA 337
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y ++ A Q V + +F E+ + + P+ Y+YN ++ + K + + M
Sbjct: 338 YTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMD 397
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
+ KP+ T L I+ YGK K Q ++ + P + N+++ K+ G
Sbjct: 398 IHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLG 457
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM-------KV 395
A+ VF ++ AM +P ITY +I C S+ FDE K+ DM V
Sbjct: 458 MAKRVFHELKAMGVSPDTITYTMMIKC---CSKASK----FDEAVKIFYDMIENNCVPDV 510
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+N++++ G EA +F M + P TY L + + V LL+
Sbjct: 511 LAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEE 570
Query: 456 MEQNGIVPN 464
M + PN
Sbjct: 571 MYHSNYPPN 579
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 131/300 (43%), Gaps = 19/300 (6%)
Query: 121 KSDKWLQCLEVFRWMQ----KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGC 176
K+D++ LE+F+ M K Y + I GK G++ A+ + M++ G
Sbjct: 382 KADRFGDALELFKHMDIHGPKPNGYT-----HVLFINYYGKSGESIKAIQRYELMKSKGI 436
Query: 177 RPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
PD NA+ L K+ L A F ++K M P+ +TY ++++ C++A
Sbjct: 437 VPDVVAGNAV----LFGLAKSGRLGMAKRVFHELKAM-GVSPDTITYTMMIKCCSKASKF 491
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
D+ +F ++ E+ PD+ N ++D K G E + ++K +P T+N L
Sbjct: 492 DEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTL 551
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
+ G+ ++ + + + HS P L T+N+++ K A + MT
Sbjct: 552 LAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGC 611
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM--KVSTLNAMLEAYCMNGLPTEA 414
P +Y +I YG R E F ++ K + +TL +L ++ GL EA
Sbjct: 612 IPDLSSYNTVI--YGLVKE-ERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEA 668
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 83/221 (37%), Gaps = 35/221 (15%)
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN ++ +I E + + MK C PD T+NLL+D+ GK ++M +V + M
Sbjct: 758 YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKV-QEEM 816
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
H K Y +++TY II+ +
Sbjct: 817 HRK----------------------------------GYESTYVTYNTIISGLVKSRRLE 842
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
+A +++ L G T +L+ G +A+ LF G + + Y +L
Sbjct: 843 QAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILL 902
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ A E V L + M GI P+ + + ++T +
Sbjct: 903 NGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKA 943
>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 450
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 146/326 (44%), Gaps = 19/326 (5%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH--LHTRDKAKALA 201
D IYS +I + K G A +LFSEM G P+ YN +I A+ L
Sbjct: 79 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 138
Query: 202 KALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+ + +ER P+++T+N L+ A + + + L E+ + PD TYN
Sbjct: 139 RDM--------IEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNS 190
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ + K+ + + + M S PD++TFN +ID Y + + D+ Q+ + +
Sbjct: 191 MIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRG 246
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSR 378
T+N++I + + A+ +FQ+M + P IT C I +YG+C+N +
Sbjct: 247 LVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT--CNILLYGFCENEKLEE 304
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A E+F+ + D+ N ++ C EA LF + GV PD TY ++
Sbjct: 305 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 364
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPN 464
+ + L +M+ NG P+
Sbjct: 365 GFCGKSAISDANVLFHKMKDNGHEPD 390
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 168/352 (47%), Gaps = 26/352 (7%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y ++ M K G T+ A+ L S+M + +PD +Y+A+I +D + A+
Sbjct: 44 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL--CKDGHHSDAQY 101
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNG 260
L F +M KG+ PN+ TYN ++ C+ R D L +++ E + PD+ T+N
Sbjct: 102 L--FSEMLEKGI---APNVFTYNCMIDGFCSFGRWSD-AQRLLRDMIEREINPDVLTFNA 155
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ A K G + E E + M PD +T+N +I + K FD + +F LM S
Sbjct: 156 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF-DLMAS- 213
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSR 378
P + TFN++I Y +A+ + + ++++ + TY +I +G+C DN++
Sbjct: 214 --PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI--HGFCEVDNLNA 269
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A+++F E+ G T N +L +C N EA LFE + D+ Y ++
Sbjct: 270 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 329
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTD 490
K + + L + +G+ P+ ++T++ ++G SA +D
Sbjct: 330 GMCKGSKVDEAWDLFCSLPIHGVEPD-------VQTYNVMISGFCGKSAISD 374
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 142/315 (45%), Gaps = 11/315 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ LI + +G+ A L ++M G D Y ++ D AL
Sbjct: 13 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL----NLL 68
Query: 208 QKMKGMERCKPNIVTYN-ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
KM+ KP++V Y+ I+ R C + D LF E+ E +AP+++TYN ++D +
Sbjct: 69 SKMEE-THIKPDVVIYSAIIDRLCKDGHHSD-AQYLFSEMLEKGIAPNVFTYNCMIDGFC 126
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
G + + +L M + PD++TFN LI + K + E++ ++H P
Sbjct: 127 SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 186
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T+NSMI + K A+++F M +P +T+ II +Y V ++ E+
Sbjct: 187 TYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREI 242
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
S+ G +T N ++ +C A LF+ + GV PD+ T +L + +
Sbjct: 243 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 302
Query: 447 ELVQKLLKRMEQNGI 461
E +L + ++ + I
Sbjct: 303 EEALELFEVIQMSKI 317
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 136/340 (40%), Gaps = 60/340 (17%)
Query: 133 RWMQKQRW--------YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
RW QR D ++ LI+ K+G+ A L EM + PD YN
Sbjct: 130 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 189
Query: 185 ALITAHL-HTR-DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNAL 242
++I H R D AK + F M P++VT+N ++ +A+ VD+ L
Sbjct: 190 SMIYGFCKHNRFDDAKHM------FDLMA-----SPDVVTFNTIIDVYCRAKRVDEGMQL 238
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
+E+ L + TYN ++ + + + + + M S+ PD IT N+L+ + +
Sbjct: 239 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCE 298
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ ++ ++F+ + SK +N
Sbjct: 299 NEKLEEALELFEVIQMSKIDLDTVAYN--------------------------------- 325
Query: 363 YECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
I ++G C V A ++F L G + V T N M+ +C ++A++LF
Sbjct: 326 ----IIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 381
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+ G PD+STY L + KA + +L+ M NG
Sbjct: 382 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 421
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 113/248 (45%), Gaps = 6/248 (2%)
Query: 218 PNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
P ++T+N L+ C + R V + AL ++ L D+ TY +++ K G K +
Sbjct: 8 PVVITFNTLINGLCLEGR-VLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALN 66
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+LS+M+ KPD++ ++ +ID K + +F ++ P + T+N MI +
Sbjct: 67 LLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFC 126
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
A+ + + M + P +T+ +I+ + A ++ DE+
Sbjct: 127 SFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 186
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
T N+M+ +C + +A +F+ + +PD T+ + Y +A + +LL+ +
Sbjct: 187 TYNSMIYGFCKHNRFDDAKHMFD----LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREI 242
Query: 457 EQNGIVPN 464
+ G+V N
Sbjct: 243 SRRGLVAN 250
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 6/168 (3%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM 171
C +L +++K + LE+F +Q + + DT Y+ +I M K + A LF +
Sbjct: 289 CNILLYGFCENEKLEEALELFEVIQMSKIDL-DTVAYNIIIHGMCKGSKVDEAWDLFCSL 347
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
G PD YN +I+ A++ A F KMK +P+ TYN L+R C
Sbjct: 348 PIHGVEPDVQTYNVMISGFC----GKSAISDANVLFHKMKDNGH-EPDNSTYNTLIRGCL 402
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+A +D+ L E+ + + D +T V D + K +LS
Sbjct: 403 KAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRLDKSFSDMLS 450
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 170/353 (48%), Gaps = 14/353 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
++ ++G++ W LE+ M+ + D + +I+ G++G A F +++ +
Sbjct: 281 VYGKMGRA--WSMILELLDEMRSKGLEF-DEFTCTTVISACGREGILDEARRFFDDLKLN 337
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G +P + YN++ L KA +AL ++M+ C+P+ +TYN L+ A +A
Sbjct: 338 GYKPGTATYNSM----LQVFGKAGVYTEALNILKEMED-NNCEPDAITYNELVAAYVRAG 392
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
D+ A+ + + P+ TY V++AYGK G + V +MK C P++ T+N
Sbjct: 393 FHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYN 452
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++ GKR + M ++ + + P T+N+M+ G+ +GK ++V Q + M
Sbjct: 453 NVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGE---KGKQKFVSQVLREM 509
Query: 355 K---YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
K + P T+ +I+ YG C + +++ E+ G ++T NA+L A G
Sbjct: 510 KNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNW 569
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A+ + + G P+ ++Y LL Y+KA ++K+ + + P+
Sbjct: 570 KAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPS 622
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 172/365 (47%), Gaps = 14/365 (3%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
GK+ + LEVF M K+ + + Y+ ++ ++GK+ ++ + + +M+ +GC PD
Sbjct: 424 GKAGDADKALEVFGQM-KELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPD 482
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERC--KPNIVTYNILLRACAQARNVD 237
+N ++ A + K K +++ L + M+ C +P+ T+N L+ A + +
Sbjct: 483 RITWNTML-AVCGEKGKQKFVSQVL------REMKNCGFEPDKETFNTLISAYGRCGSEV 535
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
V ++ E+ + P I TYN +++A + G K ESV+ M+ KP+ +++LL+
Sbjct: 536 DVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLL 595
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
Y K +E+V + P+ ++++ K R E F ++ Y
Sbjct: 596 HCYSKAGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQNNGYK 655
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
+ +++M+ + +A E+ D + G + T N++++ Y G +A+ +
Sbjct: 656 LDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEM 715
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
++ N G++PD +Y + K + K + + ++L M NG+ P F TF S
Sbjct: 716 LKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITF----NTFMS 771
Query: 478 SLAGS 482
AG+
Sbjct: 772 CYAGN 776
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 141/318 (44%), Gaps = 5/318 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ ++AV G+KG+ + + EM+N G PD +N LI+A+ + +AK G
Sbjct: 486 WNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVD-VAKMYGEM 544
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
G C I TYN LL A A+ N ++ ++ + P+ +Y+ ++ Y K
Sbjct: 545 VA-AGFTPC---ITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLHCYSK 600
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G ++ +E V + P + L+ + K + ME+ F L ++ K +
Sbjct: 601 AGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQNNGYKLDMVV 660
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
NSM+ + + + KA + + P+ +TY +I +Y + +A E+ ++
Sbjct: 661 INSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQ 720
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G V + N +++ +C GL EA + GV P T+ Y +
Sbjct: 721 NSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCYAGNGLFA 780
Query: 448 LVQKLLKRMEQNGIVPNK 465
++++ M ++G +PN+
Sbjct: 781 EADEVIRYMIEHGCMPNE 798
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 110/244 (45%), Gaps = 7/244 (2%)
Query: 226 LLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG----MIKEMESVLSRM 281
+L A A+ + +F+++ E+ L P + TYN ++D YGK G MI E+ L M
Sbjct: 243 VLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMGRAWSMILEL---LDEM 299
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
+S + D T +I + G+ D+ + F L + KP T+NSM+ +GKA +
Sbjct: 300 RSKGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVY 359
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
+A + ++M P ITY ++ Y + D ++ G T +
Sbjct: 360 TEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTV 419
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ AY G +A +F +G P+ TY + K + E + K+L M+ NG
Sbjct: 420 INAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGC 479
Query: 462 VPNK 465
P++
Sbjct: 480 PPDR 483
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 1/212 (0%)
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR-QAFDKMEQV 312
D+ V+ AY + G K + +MK P ++T+N+++D YGK +A+ + ++
Sbjct: 236 DVKACTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMGRAWSMILEL 295
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGY 372
+ + T ++I G+ + +A F + Y P TY ++ ++G
Sbjct: 296 LDEMRSKGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGK 355
Query: 373 CDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
+ A I E+ + T N ++ AY G E + + + GV P++ T
Sbjct: 356 AGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAIT 415
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y + AY KA + ++ +M++ G VPN
Sbjct: 416 YTTVINAYGKAGDADKALEVFGQMKELGCVPN 447
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 143/317 (45%), Gaps = 5/317 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I ++ K G+ A + EM + G PD +Y LI K ++ A F
Sbjct: 326 YNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFC----KLGNVSSAYRLF 381
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M+ + P+ +TY ++ Q V + + LF E+ L PD TY ++D Y K
Sbjct: 382 DEMQK-RKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCK 440
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G +KE S+ ++M P+I+T+ L D K D ++ + + + T
Sbjct: 441 EGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYT 500
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+NS++ KA +A + + M + P +TY ++ Y + RA E+ ++
Sbjct: 501 YNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQML 560
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
V T N ++ +CM+G+ + + L + G+ P+++TY L K Y N
Sbjct: 561 DRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMR 620
Query: 448 LVQKLLKRMEQNGIVPN 464
++ + M G+VP+
Sbjct: 621 ATTEIYRGMCAKGVVPD 637
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 150/338 (44%), Gaps = 6/338 (1%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
+F MQK++ D Y+ +I + + G+ A LF EM PD Y ALI +
Sbjct: 380 LFDEMQKRK-ISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGY 438
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
K + +A +M M PNIVTY L + VD N L E+
Sbjct: 439 C----KEGKMKEAFSLHNQMLQMG-LTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 493
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
L +IYTYN +++ K G I + ++ M+ PD +T+ L+D+Y K + +
Sbjct: 494 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAH 553
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
++ + ++ + +PT+ TFN ++ + + + E + + M P+ TY +I Y
Sbjct: 554 ELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQY 613
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
+N+ EI+ + G +T N +++ +C EA L + G
Sbjct: 614 CIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTV 673
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
S+Y L K + K ++L ++M + G+V ++ +
Sbjct: 674 SSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIY 711
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 148/335 (44%), Gaps = 5/335 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
+T Y+ + + + G+ A L +M GC PD Y+ +I + + L +
Sbjct: 252 NTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGE----LQRV 307
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L ++M+ ++ KPN TYN ++ + V + + +E+ +APD Y ++D
Sbjct: 308 LKLIEEMQ-IKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLID 366
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ K G + + M+ + PD IT+ +I + + +++F ++ + +P
Sbjct: 367 GFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEP 426
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T+ ++I Y K +A + +M M TP+ +TY + C V A E+
Sbjct: 427 DEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELL 486
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
E+ + G ++ + T N+++ C G +A L ++ G PD+ TY L AY K+
Sbjct: 487 HEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKS 546
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+LL++M + P F + F S
Sbjct: 547 REMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMS 581
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 131/295 (44%), Gaps = 9/295 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI K+G+ + A L ++M G P+ Y AL K + A
Sbjct: 427 DEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLC----KCGEVDTA 482
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+M KG+E NI TYN L+ +A N+DQ L K++ + PD TY +
Sbjct: 483 NELLHEMCRKGLEL---NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTL 539
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
MDAY K+ + +L +M + +P ++TFN+L++ + + E++ K ++
Sbjct: 540 MDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGI 599
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P T+NS+I Y +++ M A P TY +I + N+ A
Sbjct: 600 MPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWF 659
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+ ++ G ++ VS+ NA+++ + EA LFE G+ D Y +
Sbjct: 660 LHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIF 714
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 40/91 (43%)
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
D + A ++F E ++G ++ N + + C G EA L G PD +Y
Sbjct: 232 DGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISY 291
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ Y + + V KL++ M+ G+ PN
Sbjct: 292 STVINGYCQVGELQRVLKLIEEMQIKGLKPN 322
>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 142/320 (44%), Gaps = 5/320 (1%)
Query: 145 TGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKAL 204
T Y+ L+ K G R A ++ SEM SG P+ Y+ LI A+ A+ A
Sbjct: 341 TRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAY----GNAERWESAR 396
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
++M+ +PN ++ +L + + + +E+ +S + PD YN ++D
Sbjct: 397 IVLKEMEA-SNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDT 455
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+GK + + RM S +PD IT+N L+D + K D+ E++F+ +M P
Sbjct: 456 FGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPC 515
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
TFN MI ++G + + M + P+ +TY +I +YG A E D
Sbjct: 516 NTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLD 575
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
++ G + NA+L AY GL +A F + G+ P L A+ K
Sbjct: 576 DMKAAGLKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALNSLINAFGKDR 635
Query: 445 MKELVQKLLKRMEQNGIVPN 464
+L+ M++N + P+
Sbjct: 636 RDVEAFVVLQYMKENDLKPD 655
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 162/347 (46%), Gaps = 13/347 (3%)
Query: 137 KQRWYIADTGIYSKLIAVMGK--KGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR 194
++ Y +D YS +I + K + + + ++ E+ D ++N +I
Sbjct: 226 REDGYPSDLVNYSLIIRSLMKNNRANSSILQKIYREIDRDKLEVDVQLWNDIIVGFAKAG 285
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
D KAL + LG Q G+ +VT L C + ++ A+F+E+ ++ L P
Sbjct: 286 DLDKAL-EFLGVVQG-SGLSVKTATLVTVIWGLGNCGR---TEEAEAIFEEMRDNGLQPR 340
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
YN ++ Y K G++++ E V+S M+ + P+ T++LLID+YG + ++ V K
Sbjct: 341 TRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLK 400
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT---PSFITYECIITMYG 371
+ S +P F+ ++ +Y R +G+ + FQ + M+ + P I Y +I +G
Sbjct: 401 EMEASNVQPNAYVFSRILASY---RDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFG 457
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ + A FD + G + T N +++ +C G A+ LFE G P ++
Sbjct: 458 KFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNT 517
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
T+ ++ ++ + V+ LL M G++PN + ++ + S
Sbjct: 518 TFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKS 564
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 138/321 (42%), Gaps = 9/321 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS LI G + A + EM S +P+ V++ ++ ++ RDK + F
Sbjct: 379 YSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASY---RDKGEWQKT----F 431
Query: 208 QKMKGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
Q ++ ME +P+ + YN+L+ + +D A F + + PD T+N ++D +
Sbjct: 432 QVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCH 491
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G E + M P TFN++I+S+G ++ +D ++ + ++ P
Sbjct: 492 CKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNA 551
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+ ++I YGK+ A M A PS Y ++ Y +A F
Sbjct: 552 VTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQAVSAFWA 611
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ G + LN+++ A+ + EA ++ + + PD TY L KA
Sbjct: 612 MRDDGLKPSLLALNSLINAFGKDRRDVEAFVVLQYMKENDLKPDVVTYTTLMKALILVEK 671
Query: 446 KELVQKLLKRMEQNGIVPNKR 466
+ V + + M +G P+++
Sbjct: 672 FDKVPSVYEEMILSGCTPDRK 692
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 117/255 (45%), Gaps = 7/255 (2%)
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y+IL+ A Q+ + + L ++ + L P TYN ++ A +N I++ +++ RM+
Sbjct: 172 YSILIHALGQSEKLYEAFLLSQKQN---LTP--LTYNALISACARNNDIEKALNLICRMR 226
Query: 283 SNQCKPDIITFNLLIDSYGK--RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
+ D++ ++L+I S K R ++++++ + K + + +N +I+ + KA
Sbjct: 227 EDGYPSDLVNYSLIIRSLMKNNRANSSILQKIYREIDRDKLEVDVQLWNDIIVGFAKAGD 286
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
KA + + T +I G C A IF+E+ G + NA
Sbjct: 287 LDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRAYNA 346
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+L Y GL +A+ + GV P+ TY LL AY A E + +LK ME +
Sbjct: 347 LLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEASN 406
Query: 461 IVPNKRFFLEALETF 475
+ PN F L ++
Sbjct: 407 VQPNAYVFSRILASY 421
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 143/317 (45%), Gaps = 5/317 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I ++ K G+ A + EM + G PD +Y LI K ++ A F
Sbjct: 226 YNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFC----KLGNVSSAYRLF 281
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M+ + P+ +TY ++ Q V + + LF E+ L PD TY ++D Y K
Sbjct: 282 DEMQK-RKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCK 340
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G +KE S+ ++M P+I+T+ L D K D ++ + + + T
Sbjct: 341 EGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYT 400
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+NS++ KA +A + + M + P +TY ++ Y + RA E+ ++
Sbjct: 401 YNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQML 460
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
V T N ++ +CM+G+ + + L + G+ P+++TY L K Y N
Sbjct: 461 DRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMR 520
Query: 448 LVQKLLKRMEQNGIVPN 464
++ + M G+VP+
Sbjct: 521 ATTEIYRGMCAKGVVPD 537
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 150/338 (44%), Gaps = 6/338 (1%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
+F MQK++ D Y+ +I + + G+ A LF EM PD Y ALI +
Sbjct: 280 LFDEMQKRK-ISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGY 338
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI 250
K + +A +M M PNIVTY L + VD N L E+
Sbjct: 339 C----KEGKMKEAFSLHNQMLQMG-LTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 393
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
L +IYTYN +++ K G I + ++ M+ PD +T+ L+D+Y K + +
Sbjct: 394 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAH 453
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
++ + ++ + +PT+ TFN ++ + + + E + + M P+ TY +I Y
Sbjct: 454 ELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQY 513
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
+N+ EI+ + G +T N +++ +C EA L + G
Sbjct: 514 CIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTV 573
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
S+Y L K + K ++L ++M + G+V ++ +
Sbjct: 574 SSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIY 611
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 163/405 (40%), Gaps = 22/405 (5%)
Query: 94 EPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWM-------QKQRWYIADTG 146
EPL R L Y R++H L++ + + + L F W + R +A
Sbjct: 79 EPLRRVLKPYESKFRADH--LIWVLMNIKNDYRLVLSFFEWACLRRDPSLEARCIVAQIA 136
Query: 147 IYSKLIAVMGKKGQ-----------TRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRD 195
SK + + K Q A LF +M N G N I+ D
Sbjct: 137 TASKDLKMARKLIQDFWVNPNLDVGVSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLD 196
Query: 196 KAKALAKALGYFQKMKGME--RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP 253
K K + ++ M+ KPN TYN ++ + V + + +E+ +AP
Sbjct: 197 GIKIALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAP 256
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
D Y ++D + K G + + M+ + PD IT+ +I + + +++F
Sbjct: 257 DGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLF 316
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
++ + +P T+ ++I Y K +A + +M M TP+ +TY + C
Sbjct: 317 HEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKC 376
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
V A E+ E+ + G ++ + T N+++ C G +A L ++ G PD+ TY
Sbjct: 377 GEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTY 436
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
L AY K+ +LL++M + P F + F S
Sbjct: 437 TTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMS 481
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 131/295 (44%), Gaps = 9/295 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI K+G+ + A L ++M G P+ Y AL K + A
Sbjct: 327 DEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLC----KCGEVDTA 382
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+M KG+E NI TYN L+ +A N+DQ L K++ + PD TY +
Sbjct: 383 NELLHEMCRKGLEL---NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTL 439
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
MDAY K+ + +L +M + +P ++TFN+L++ + + E++ K ++
Sbjct: 440 MDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGI 499
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P T+NS+I Y +++ M A P TY +I + N+ A
Sbjct: 500 MPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWF 559
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+ ++ G ++ VS+ NA+++ + EA LFE G+ D Y +
Sbjct: 560 LHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIF 614
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 141/313 (45%), Gaps = 5/313 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ L+ + +G+ M L+ +M G +P+ YN +I ++ K+ +ALG+
Sbjct: 135 FTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVII----NSLSKSGKANEALGFL 190
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M+ + C PN+V Y+ L+ +D+ ++F + P++YTY +M+ Y K
Sbjct: 191 KQMEKV-GCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCK 249
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
I+E +L PDI+TF +I + +Q+F+ + P + T
Sbjct: 250 IERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMT 309
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ ++ K +A +FQ+M P+ + Y +I C + +E+F L
Sbjct: 310 YGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLI 369
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G V T A++ A C GL EA LF G TPD Y ++ + + +
Sbjct: 370 DEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPS 429
Query: 448 LVQKLLKRMEQNG 460
+ ++L++ M G
Sbjct: 430 MARQLVEEMVNRG 442
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 141/320 (44%), Gaps = 11/320 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA--HLHTRDKA-KALAKAL 204
+SKL + + + G ++L E+ G D + LI HLH D L+K L
Sbjct: 65 FSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKIL 124
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
G+E P+IVT+ LL +DQV L+ ++ L P++YTYN ++++
Sbjct: 125 KL-----GLE---PSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINS 176
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
K+G E L +M+ C P+++ ++ LID Y R D+ VF ++ P
Sbjct: 177 LSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPN 236
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ T+ S++ Y K +A + + P +T+ II+ A+++F
Sbjct: 237 VYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFR 296
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ G + T +L+ C +G EA LF+ V P+ Y +L + K
Sbjct: 297 YICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCG 356
Query: 445 MKELVQKLLKRMEQNGIVPN 464
+ ++L R+ G+ PN
Sbjct: 357 KIKDGKELFSRLIDEGLKPN 376
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 121/251 (48%), Gaps = 4/251 (1%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+PN+ TYN+++ + +++ ++ K++ + P++ Y+ ++D Y G + E S
Sbjct: 164 QPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARS 223
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
V M S C P++ T+ L++ Y K + ++ Q+ + P + TF ++I
Sbjct: 224 VFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLC 283
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMK 394
+A A+ +F+ + A +TP+ +TY + + G C N+ A +F E+ +
Sbjct: 284 RAGRPLAAQQLFRYICAHGHTPNIMTYG--VLLDGLCKHGNLEEAFALFQEMQRSTVKPN 341
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
+ ++++ C G + LF + G+ P+ TY L A K + KL +
Sbjct: 342 LVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFR 401
Query: 455 RMEQNGIVPNK 465
+ME++G P+K
Sbjct: 402 KMEEDGCTPDK 412
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 140/306 (45%), Gaps = 11/306 (3%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ L KS K + L + M+K + + YS LI +GQ A +F M +
Sbjct: 172 VIINSLSKSGKANEALGFLKQMEKVGC-VPNVVNYSTLIDGYCLRGQMDEARSVFDLMVS 230
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACA 231
GC P+ Y +L+ + K + + +A+ + KG+ P+IVT+ ++
Sbjct: 231 KGCTPNVYTYTSLMNGYC----KIERIEEAVQLLDETLRKGL---VPDIVTFTTIISGLC 283
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+A LF+ + P+I TY ++D K+G ++E ++ M+ + KP+++
Sbjct: 284 RAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLV 343
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
+ +LIDS K +++F L+ KP + T+ +++ K L +A +F+KM
Sbjct: 344 IYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKM 403
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
TP Y II + + S AR++ +E+ G +T A+L + N +P
Sbjct: 404 EEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT-RALLNDFPTNDIP 462
Query: 412 TEADLL 417
L+
Sbjct: 463 ALKTLI 468
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 166/398 (41%), Gaps = 53/398 (13%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K K ++ E+ M QR I D YS LI + + + A WLF M+
Sbjct: 352 MLIDILCKEGKVIEANELLEVM-IQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQK 410
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK------GMERCKPNIVTYNILL 227
GCRPD Y L+ T + + AL Q+M G+ +CKP +++Y+I++
Sbjct: 411 LGCRPDAITYGTLMKGLCQTGN----INIALQLHQEMLNDTGRYGI-KCKPTLISYSIII 465
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
+ R D+ LF+E+ + PD+ +Y ++ + +G ++ + + + M +
Sbjct: 466 DGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQ 525
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
PD+ T ++LID K+ + ++ + ++ + T +++ KA +
Sbjct: 526 PDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQL 585
Query: 348 FQKMTAMKYTPSFIT-----------------------------------------YECI 366
F KM + P+ +T Y I
Sbjct: 586 FLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSII 645
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I C ARE+F E+ LG V + +++ +C +G +A LF ++GV
Sbjct: 646 IDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGV 705
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
PD +T+ +L K +LL+ M Q G +PN
Sbjct: 706 QPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPN 743
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 159/366 (43%), Gaps = 23/366 (6%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K K ++ E+ M QR I D YS LI + + + A WLF M+
Sbjct: 59 MLIDILCKEGKVIEANELLEVM-IQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQK 117
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK------GMERCKPNIVTYNILL 227
GCRPD Y L+ T + + AL Q+M G+ +CKP +++Y+I++
Sbjct: 118 LGCRPDAITYGTLMKGLCQTGN----INIALQLHQEMLNDTGRYGI-KCKPTLISYSIII 172
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
+ R D+ LFKE+ + PD+ +Y ++ + +G ++ + + + M +
Sbjct: 173 DGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQ 232
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
PD+ T +LID + K + ++ + ++H + T++++I +A +
Sbjct: 233 PDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQL 292
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDN------VSRAREIFDELSKLGKDM---KVSTL 398
F M + P I Y + M G C + +E+ ++ S+ G V+T
Sbjct: 293 FMSMKKLGCRPDAIAYGTL--MKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTS 350
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
+ +++ C G EA+ L E G D TY L K + L M++
Sbjct: 351 SMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQK 410
Query: 459 NGIVPN 464
G P+
Sbjct: 411 LGCRPD 416
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 146/337 (43%), Gaps = 13/337 (3%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
QR I D + L+ + K + A LF +M+ GC P+ L+ + +
Sbjct: 556 QRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIK 615
Query: 198 KALAKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
AL G+ CKPN ++Y+I++ + D+ LFKE+ + PD+
Sbjct: 616 IALELHKNMLSDTSPYGI-NCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDV 674
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
+Y ++ + ++G K+ + + + M +PD+ TF++LID K + ++ +
Sbjct: 675 ISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEV 734
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD- 374
++ P T+ +++ +A +F KM + P +TY + M G C
Sbjct: 735 MIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTL--MKGLCQT 792
Query: 375 -NVSRAREI----FDELSKLGKDMK--VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
N+ A E+ + + G + K V + + +++ C +G EA LF+ +GV
Sbjct: 793 GNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVI 852
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
P+ +Y L + ++ E + L M G+ N
Sbjct: 853 PNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLN 889
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 156/357 (43%), Gaps = 16/357 (4%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ + L K + + E+F M+ Q + D Y+ LI G+ A LF+EM +
Sbjct: 463 IIIDGLCKDRREDEARELFEEMKAQ-GIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLD 521
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G +PD + + LI L + K K L + C ++VT L++
Sbjct: 522 VGIQPDVTTSSVLIDM-LCKKGKVIEANKLLEVVIQ----RGCILDVVTCTTLVKGLCMK 576
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN------QCK 287
+ + LF ++ + P++ T +M ++G IK + M S+ CK
Sbjct: 577 HRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCK 636
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P+ I+++++ID K D+ ++FK + P + ++ S+I + ++ A+Y+
Sbjct: 637 PNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYL 696
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F +M + P T+ +I M V A E+ + + + G T +++ CM
Sbjct: 697 FNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCM 756
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK-ANMK---ELVQKLLKRMEQNG 460
N +EA LF +G PD TY L K + N+K EL +K+L Q G
Sbjct: 757 NDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYG 813
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 157/353 (44%), Gaps = 29/353 (8%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D S LI ++ KKG+ A L + GC D L+ L + + ++KA
Sbjct: 527 DVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKG-LCMKHR---ISKA 582
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILA----------P 253
F KM+ + C PN+VT L++ Q+ N+ + ELH+++L+ P
Sbjct: 583 TQLFLKMQKL-GCMPNVVTCATLMKGLCQSGNI----KIALELHKNMLSDTSPYGINCKP 637
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
+ +Y+ ++D K G E + MK+ PD+I++ LI + + + + +F
Sbjct: 638 NAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLF 697
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
++ +P + TF+ +I K +A + + M P+ +TY ++ G C
Sbjct: 698 NEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVK--GLC 755
Query: 374 --DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG-LPTEADL---LFENSHNMGVT 427
D +S A ++F ++ KLG V T +++ C G + T +L + ++ G
Sbjct: 756 MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTN 815
Query: 428 --PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
PD +Y ++ K ++ ++L K M+ G++PN + + F S
Sbjct: 816 FKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRS 868
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 137/311 (44%), Gaps = 24/311 (7%)
Query: 171 MRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNI----- 225
MR +G PD +N LI + + + LA G ++ P+IVTY+I
Sbjct: 1 MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGY-----IPDIVTYSIRPDVT 55
Query: 226 ----LLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
L+ + V + N L + + + DI TY+ ++ I E + M
Sbjct: 56 TSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSM 115
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS------KEKPTLPTFNSMIINY 335
+ C+PD IT+ L+ + + Q+ + +++ K KPTL +++ +I
Sbjct: 116 QKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGL 175
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV--SRAREIFDELSKLGKDM 393
K R + +A +F++M A P I+Y +I +G+C + +A+ +F+E+ +G
Sbjct: 176 CKDRREDEARELFKEMKAQGMMPDVISYTSLI--HGFCHSGKWEKAKCLFNEMLDVGIQP 233
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
V+T +++ +C G EA+ L E + G D TY L K + +L
Sbjct: 234 DVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLF 293
Query: 454 KRMEQNGIVPN 464
M++ G P+
Sbjct: 294 MSMKKLGCRPD 304
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 132/304 (43%), Gaps = 51/304 (16%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ + L K + + E+F+ M K I D Y+ LI + G+ + A +LF+EM +
Sbjct: 644 IIIDGLCKCGREDEARELFKEM-KALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVD 702
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G +PD + ++ LI + ++ A L +G C PN VTY L++
Sbjct: 703 IGVQPDVTTFSVLI--DMLCKEGKVIEANELLEVMIQRG---CIPNTVTYTTLVKGLCMN 757
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN------QCK 287
+ + LF ++ + PD+ TY +M + G IK + +M S+ K
Sbjct: 758 DRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFK 817
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
PD+I+++++ID K H +E +A +
Sbjct: 818 PDVISYSIIIDGLCK---------------HGRED--------------------EAREL 842
Query: 348 FQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
F++M A+ P+ I+Y +I +G+C + A+ +F+E+ G + T + M+ +
Sbjct: 843 FKEMKALGVIPNVISYTSLI--HGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGF 900
Query: 406 CMNG 409
C G
Sbjct: 901 CKEG 904
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 95/200 (47%), Gaps = 10/200 (5%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K K ++ E+ M QR I +T Y+ L+ + + A LF +M+
Sbjct: 714 VLIDMLCKEGKVIEANELLEVM-IQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQK 772
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM-----KGMERCKPNIVTYNILLR 228
GC PD Y L+ T + + AL +KM + KP++++Y+I++
Sbjct: 773 LGCLPDVVTYGTLMKGLCQTGN----IKTALELHKKMLSDTGQYGTNFKPDVISYSIIID 828
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
+ D+ LFKE+ + P++ +Y ++ + ++G +++ + + + M +
Sbjct: 829 GLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQL 888
Query: 289 DIITFNLLIDSYGKRQAFDK 308
+ +T++++I + K DK
Sbjct: 889 NAVTYSVMIHGFCKEGQIDK 908
>gi|410110065|gb|AFV61112.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
citrodora]
Length = 435
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 142/308 (46%), Gaps = 7/308 (2%)
Query: 134 WMQK--QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
W+QK Q D +YS LI + K A+ +FS ++ SG PD YNA+I
Sbjct: 38 WLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVF- 96
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KAK +A +MK PN +Y+ LL + + + ++F E+ E
Sbjct: 97 ---GKAKLFREARALISEMK-TAGVMPNTASYSTLLTMYVENKKFIEALSVFSEMREIKC 152
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
D+ T N ++D YG+ GM KE + + M+ + +++++N L+ YG + F +
Sbjct: 153 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIETNVVSYNTLLRVYGDAELFGEAIH 212
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+F+ + + + T+NSM++ YGK KA + Q+M P+ ITY II+++G
Sbjct: 213 LFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWG 272
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ RA +F +L G ++ M+ AY GL A L + P +
Sbjct: 273 KVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKSPDNIPRDT 332
Query: 432 TYKLLYKA 439
+L A
Sbjct: 333 AIHILAGA 340
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 138/295 (46%), Gaps = 5/295 (1%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
LF EMR PD Y+ LIT H K AL + QKM+ +R ++V Y+ L
Sbjct: 3 LFDEMRERALSPDRYTYSTLIT-HF---GKEGLFDAALSWLQKME-QDRVPGDLVLYSNL 57
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+ + + + ++F L S PD+ YN +++ +GK + +E +++S MK+
Sbjct: 58 IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARALISEMKTAGV 117
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
P+ +++ L+ Y + + F + VF + K L T N MI YG+ + +A+
Sbjct: 118 MPNTASYSTLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADK 177
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+F M M + ++Y ++ +YG + A +F + + + V T N+M+ Y
Sbjct: 178 LFWGMRKMGIETNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYG 237
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+A+ L + N G+ P+S TY + + K + L +++ +G+
Sbjct: 238 KTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 292
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 152/327 (46%), Gaps = 5/327 (1%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
++R D YS LI GK+G A+ +M D +Y+ LI D
Sbjct: 8 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 67
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+KA++ F ++K P++V YN ++ +A+ + AL E+ + + P+
Sbjct: 68 SKAIS----IFSRLK-RSGFTPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTA 122
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+Y+ ++ Y +N E SV S M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 123 SYSTLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 182
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+ + ++N+++ YG A L G+A ++F+ M + +TY ++ +YG
Sbjct: 183 RKMGIETNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEH 242
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A + E+ G + T + ++ + G A +LF+ + GV D Y+ +
Sbjct: 243 EKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTM 302
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVP 463
AY +A + ++LL ++ +P
Sbjct: 303 IVAYERAGLVAHAKRLLHELKSPDNIP 329
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 111/225 (49%)
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
+ LF E+ E L+PD YTY+ ++ +GK G+ S L +M+ ++ D++ ++ LI+
Sbjct: 1 HGLFDEMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIEL 60
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
K + K +F L S P L +N+MI +GKA+L +A + +M P+
Sbjct: 61 SRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPN 120
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
+Y ++TMY A +F E+ ++ + ++T N M++ Y G+ EAD LF
Sbjct: 121 TASYSTLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFW 180
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
MG+ + +Y L + Y A + L + M++ I N
Sbjct: 181 GMRKMGIETNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 225
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 151/360 (41%), Gaps = 42/360 (11%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L SEM+ +G P+ + Y+ L+T ++
Sbjct: 78 KRSGFTPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTASYSTLLTMYVEN--- 134
Query: 197 AKALAKALGYFQKMK--------------------------------GMER--CKPNIVT 222
K +AL F +M+ GM + + N+V+
Sbjct: 135 -KKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIETNVVS 193
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
YN LLR A + LF+ + + ++ TYN +M YGK ++ +++ M+
Sbjct: 194 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQ 253
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
+ +P+ IT++ +I +GK D+ +F+ L S + + +MI+ Y +A L
Sbjct: 254 NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVA 313
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
A+ + ++ +P I + I + + A +F + G+ ++ M+
Sbjct: 314 HAKRLLHELK----SPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMI 369
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+ A +F+ +G PDS+ L+ AY K + + + M++ G V
Sbjct: 370 HLFSKYKKYANAVEVFDKMRGLGYFPDSNVIALVLNAYGKLHELDKANDVYMEMQEVGCV 429
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 130/298 (43%), Gaps = 37/298 (12%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
K+++ L VF M++ + + D + +I V G+ G + A LF MR G + Y
Sbjct: 136 KFIEALSVFSEMREIKCLL-DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIETNVVSY 194
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
N L+ + A+ +A+ F+ M+ + + N+VTYN ++ + ++ N L
Sbjct: 195 NTLLRVY----GDAELFGEAIHLFRLMQ-RKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 249
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY--- 300
+E+ + P+ TY+ ++ +GK G + + +++S+ + D + + +I +Y
Sbjct: 250 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERA 309
Query: 301 -----GKRQAFD--------------------KMEQ---VFKSLMHSKEKPTLPTFNSMI 332
KR + ++E+ VF+ + + E + F MI
Sbjct: 310 GLVAHAKRLLHELKSPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMI 369
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
+ K + A VF KM + Y P ++ YG + +A +++ E+ ++G
Sbjct: 370 HLFSKYKKYANAVEVFDKMRGLGYFPDSNVIALVLNAYGKLHELDKANDVYMEMQEVG 427
>gi|15240649|ref|NP_199839.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170477|sp|Q9FGR7.1|PP426_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g50280, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1006; Flags: Precursor
gi|9759030|dbj|BAB09399.1| unnamed protein product [Arabidopsis thaliana]
gi|332008538|gb|AED95921.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 723
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 168/361 (46%), Gaps = 16/361 (4%)
Query: 112 CFLLFEEL---GKSDKWLQCLEVFRWMQKQ--RWYIADTGIYSKLIAVMGKKGQTRLAMW 166
C +L L G+S K + E+F M ++ +W ++ L+ +G A+
Sbjct: 311 CAILITTLRKAGRSAK--EVWEIFEKMSEKGVKW---SQDVFGGLVKSFCDEGLKEEALV 365
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
+ +EM G R + VYN L+ A+ +K+ + + G F +M+ + KP+ TYNIL
Sbjct: 366 IQTEMEKKGIRSNTIVYNTLMDAY----NKSNHIEEVEGLFTEMRD-KGLKPSAATYNIL 420
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES-VLSRMKSNQ 285
+ A A+ D V L +E+ + L P++ +Y ++ AYG+ + +M + RMK
Sbjct: 421 MDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVG 480
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
KP ++ LI +Y +K F+ + KP++ T+ S++ + ++ GK
Sbjct: 481 LKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLM 540
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+++ M K + ITY ++ + AR++ E SK+G V T N ++ AY
Sbjct: 541 EIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAY 600
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
G + L + + + PDS TY + A+ + + K M ++G VP+
Sbjct: 601 ARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDP 660
Query: 466 R 466
R
Sbjct: 661 R 661
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 160/361 (44%), Gaps = 7/361 (1%)
Query: 86 LMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADT 145
L ++ + + L L+ + + V C +G+S CL + WM Q +A
Sbjct: 179 LAKNLKENQTLGEMLSGFERRVSDTECVEALVMMGESGFVKSCLYFYEWMSLQEPSLASP 238
Query: 146 GIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALG 205
S L ++G++ + L S + + D +YNA I+ ++ A
Sbjct: 239 RACSVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISG----LSASQRYDDAWE 294
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQA-RNVDQVNALFKELHESILAPDIYTYNGVMDA 264
++ M + P+ VT IL+ +A R+ +V +F+++ E + + G++ +
Sbjct: 295 VYEAMDKI-NVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKS 353
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ G+ +E + + M+ + + I +N L+D+Y K +++E +F + KP+
Sbjct: 354 FCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPS 413
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR-AREIF 383
T+N ++ Y + E + ++M + P+ +Y C+I+ YG +S A + F
Sbjct: 414 AATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAF 473
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ K+G + A++ AY ++G +A FE G+ P TY + A+ ++
Sbjct: 474 LRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRS 533
Query: 444 N 444
Sbjct: 534 G 534
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 148/344 (43%), Gaps = 24/344 (6%)
Query: 55 PRTGICCVWTRPRSKRGRKSEELE-------------SKELVRVLMRSFSDK----EPLV 97
P C + K GR ++E+ S+++ L++SF D+ E LV
Sbjct: 306 PDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALV 365
Query: 98 RTLNKYVKVVRSEHCFL--LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVM 155
K +RS L + KS+ + +F M + + Y+ L+
Sbjct: 366 IQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEM-RDKGLKPSAATYNILMDAY 424
Query: 156 GKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER 215
++ Q + L EM + G P+ Y LI+A+ T+ + A A F +MK +
Sbjct: 425 ARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADA---FLRMKKVG- 480
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
KP+ +Y L+ A + + ++ A F+E+ + + P + TY V+DA+ ++G ++
Sbjct: 481 LKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLM 540
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
+ M + K IT+N L+D + K+ + + V +P++ T+N ++ Y
Sbjct: 541 EIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAY 600
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
+ K + ++M A+ P ITY +I + + RA
Sbjct: 601 ARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRA 644
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 147/346 (42%), Gaps = 32/346 (9%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA------ 201
Y+ +I + K+G A + EM + PD YN++I A + +A+
Sbjct: 14 YNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTVMV 73
Query: 202 ---------------------KALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQ 238
KA+G F+KM G+E P++VTYN L+ + +
Sbjct: 74 MPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIE---PDVVTYNSLMDYLCKNGKCTE 130
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+F + + L PDI TY ++ Y G + EM +L+ M N + D FN+LI
Sbjct: 131 ARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILIC 190
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
+Y K++ D++ VF + P + ++I K A F++M TP
Sbjct: 191 AYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTP 250
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+ + Y +I D +A E+ E+ G + + N +L++ C G E+ LF
Sbjct: 251 NVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLF 310
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ ++GV PD TY L Y A + KLL M G+ P+
Sbjct: 311 DLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPD 356
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 121/261 (46%), Gaps = 9/261 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +++ LI K+ + + +FS+MR G P+ Y +I K L A
Sbjct: 181 DHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLC----KLGRLDDA 236
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+ F++M KG+ PN+V Y L+ A ++ L E+ + + P+I +N +
Sbjct: 237 MLNFEQMIDKGL---TPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTI 293
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+D+ K G + E + + + PD+IT++ LID Y D ++ ++
Sbjct: 294 LDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGL 353
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
KP T++++I Y K A +F++M + P ITY I+ + A+E
Sbjct: 354 KPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKE 413
Query: 382 IFDELSKLGKDMKVSTLNAML 402
++ +++ G +++ST N +L
Sbjct: 414 LYARITESGTQLELSTYNIIL 434
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 144/343 (41%), Gaps = 13/343 (3%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
G+S+K + +FR M D Y+ L+ + K G+ A +F M G +PD
Sbjct: 91 GQSEKAIG---IFRKMCSDGIE-PDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPD 146
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVD 237
+ Y L LH AL + M GM+ + +NIL+ A + VD
Sbjct: 147 ITTYGTL----LHGYASKGALVEMHDLLALMVQNGMQL---DHHVFNILICAYTKQEKVD 199
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+V +F ++ + L P+ Y V+D K G + + +M P+++ + LI
Sbjct: 200 EVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLI 259
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+ ++K E++ ++ P + FN+++ + K +++ +F + +
Sbjct: 260 HALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVN 319
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P ITY +I Y + A ++ + +G T + ++ YC +A L
Sbjct: 320 PDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALAL 379
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
F+ + GV PD TY ++ + ++L R+ ++G
Sbjct: 380 FKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESG 422
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 152/368 (41%), Gaps = 19/368 (5%)
Query: 78 ESKELVRVLMRSFSDK-EPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQ 136
+S++ + + + SD EP V T N L + L K+ K + ++F M
Sbjct: 92 QSEKAIGIFRKMCSDGIEPDVVTYNS------------LMDYLCKNGKCTEARKIFDSMV 139
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K R D Y L+ KG L + M +G + D V+N LI A+ K
Sbjct: 140 K-RGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYT----K 194
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+ + + + F KM+ + PN V Y ++ + +D F+++ + L P++
Sbjct: 195 QEKVDEVVLVFSKMR-QQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVV 253
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
Y ++ A ++ E ++ + P+I+ FN ++DS K + +++F L
Sbjct: 254 VYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLL 313
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
H P + T++++I Y A A + M ++ P +TY +I Y + +
Sbjct: 314 GHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRM 373
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
A +F E+ G + + T N +L A L+ G + STY ++
Sbjct: 374 EDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNII 433
Query: 437 YKAYTKAN 444
+ K N
Sbjct: 434 LMDFAKTN 441
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 120/292 (41%), Gaps = 31/292 (10%)
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKEL-----------HESILA----------- 252
RC P++V+YN ++ + +VD+ + E+ + SI+A
Sbjct: 6 RCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRA 65
Query: 253 ---------PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR 303
P+ +TYN +M Y +G ++ + +M S+ +PD++T+N L+D K
Sbjct: 66 MEVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKN 125
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
+ ++F S++ KP + T+ +++ Y + + M +
Sbjct: 126 GKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVF 185
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+I Y + V +F ++ + G +++ C G +A L FE +
Sbjct: 186 NILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMID 245
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
G+TP+ Y L A + E ++L+ + GI PN FF L++
Sbjct: 246 KGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSL 297
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 79/214 (36%), Gaps = 46/214 (21%)
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
+C PD++++N +ID K DK + ++ + P T+NS+I KA+
Sbjct: 4 DGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMD 63
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
+A V M P+ TY N+++
Sbjct: 64 RAMEVLTVMV----MPNCFTY-----------------------------------NSIM 84
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
YC +G +A +F + G+ PD TY L K +K+ M + G+
Sbjct: 85 HGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLK 144
Query: 463 PNKRFFLEALETFSSSLAGSQSGSAKTDLTRSLS 496
P+ + T+ + L G S A ++ L+
Sbjct: 145 PD-------ITTYGTLLHGYASKGALVEMHDLLA 171
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 142/327 (43%), Gaps = 9/327 (2%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ D Y+ LI KKG LA+ + +MRN GC+P+ Y L+ K +
Sbjct: 380 VPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFC----KLGKID 435
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+A +M + KPN V +N L+ A + + + +F+E+ PD+YT+N +
Sbjct: 436 EAYNLLNEMSA-DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 494
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ + IK +L M S + +T+N LI+++ +R + ++ ++
Sbjct: 495 ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 554
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRA 379
T+NS+I +A KA +F+KM PS I+ C I + G C + V A
Sbjct: 555 LLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSIS--CNILINGLCRSGMVEEA 612
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
E E+ G + T N+++ C G + +F G+ PD+ TY L
Sbjct: 613 VEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSW 672
Query: 440 YTKANMKELVQKLLKRMEQNGIVPNKR 466
K LL ++G VPN R
Sbjct: 673 LCKGGFVYDACLLLDEGIEDGFVPNDR 699
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 148/364 (40%), Gaps = 30/364 (8%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L V R M K + ++ IY LI + K + A+ L EM GC PD +N +I
Sbjct: 231 LSVLRDMTKHGC-VPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 289
Query: 189 AHLHTRDKAKALAKALG-------------YFQKMKGMERC--------------KPNIV 221
L D+ AK + Y M G+ + KP V
Sbjct: 290 G-LCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSV 348
Query: 222 TYNILLRACAQARNVDQVNALFKELHESI-LAPDIYTYNGVMDAYGKNGMIKEMESVLSR 280
+N L+ +D A+ ++ S + PD+ TYN ++ Y K G++ VL
Sbjct: 349 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRD 408
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
M++ CKP++ ++ +L+D + K D+ + + KP FN +I + K
Sbjct: 409 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHR 468
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
+A +F++M P T+ +I+ D + A + ++ G T N
Sbjct: 469 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 528
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
++ A+ G EA L G D TY L K +A + + L ++M ++G
Sbjct: 529 LINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 588
Query: 461 IVPN 464
+VP+
Sbjct: 589 LVPS 592
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 156/366 (42%), Gaps = 15/366 (4%)
Query: 101 NKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQ 160
N + K+ + C LL L S +E+F W Q+ Y +Y LI +G G+
Sbjct: 65 NSFHKITPFQLCKLLELPLDVSTS----MELFSWTGSQKGYRHSFDVYQVLIGKLGSNGE 120
Query: 161 TRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNI 220
+ L +M++ G S++ +++ + DKA + +M+ + C+P
Sbjct: 121 FKTIDRLLMQMKDEGIVFKESLFISIMRDY----DKAGFPGQTTRLMLEMRNVYSCEPTF 176
Query: 221 VTYNILLRACAQARNVDQVNA-LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+YN++L N +V A +F ++ + P ++T+ VM A + SVL
Sbjct: 177 KSYNVVLEILVSG-NCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLR 235
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
M + C P+ + + LI S K ++ Q+ + + P TFN +I+ K
Sbjct: 236 DMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFD 295
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLN 399
+A + +M +TP ITY + M G C + R D ++ K V N
Sbjct: 296 RINEAAKMVNRMLIRGFTPDDITYGYL--MNGLC-KIGRVDAAKDLFYRIPKPTSV-IFN 351
Query: 400 AMLEAYCMNGLPTEAD-LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
++ + +G +A +L + + G+ PD TY L Y K + L ++L+ M
Sbjct: 352 TLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRN 411
Query: 459 NGIVPN 464
G PN
Sbjct: 412 KGCKPN 417
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 139/315 (44%), Gaps = 14/315 (4%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMG--KKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
LEV R M+ + +YS I V G K G+ A L +EM G +P+ +N L
Sbjct: 403 LEVLRDMRNKG---CKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCL 459
Query: 187 ITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
I+A K + +A+ F++M KG CKP++ T+N L+ + + L +
Sbjct: 460 ISAFC----KEHRIPEAVEIFREMPRKG---CKPDVYTFNSLISGLCEVDEIKHALWLLR 512
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
++ + + TYN +++A+ + G IKE +++ M D IT+N LI +
Sbjct: 513 DMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAG 572
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
DK +F+ ++ P+ + N +I ++ + +A ++M TP +T+
Sbjct: 573 EVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFN 632
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
+I + +F +L G T N ++ C G +A LL +
Sbjct: 633 SLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIED 692
Query: 425 GVTPDSSTYKLLYKA 439
G P+ T+ +L ++
Sbjct: 693 GFVPNDRTWSILLQS 707
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 74/167 (44%), Gaps = 5/167 (2%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ D Y+ LI + + G+ A LF +M G P N LI + +A+
Sbjct: 555 LLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVE 614
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
FQK + P+IVT+N L+ +A ++ +F++L + PD TYN +
Sbjct: 615 -----FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTL 669
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
M K G + + +L + P+ T+++L+ S ++ D+
Sbjct: 670 MSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDR 716
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 18/196 (9%)
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL---PTFNSMIINYGKARLQGKAEYVF 348
+ +LI G F ++++ LM K++ + F S++ +Y KA G+ +
Sbjct: 107 VYQVLIGKLGSNGEFKTIDRL---LMQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLM 163
Query: 349 QKM-TAMKYTPSFITYECI--ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+M P+F +Y + I + G C V+ A +D LS+ + T +++A
Sbjct: 164 LEMRNVYSCEPTFKSYNVVLEILVSGNCHKVA-ANVFYDMLSR-KIPPTLFTFGVVMKAL 221
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
C A + + G P+S Y+ L + +K N +LL+ M G VP+
Sbjct: 222 CAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDA 281
Query: 466 RFFLEALETFSSSLAG 481
ETF+ + G
Sbjct: 282 -------ETFNDVILG 290
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 155/356 (43%), Gaps = 9/356 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ + L + + Q LE F + D Y+ LI + K G+ A LF +M
Sbjct: 65 IILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVA 124
Query: 174 SG-CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
+G CRP+ YNAL+ L +D+ A A+A+ + + P++VTYN L+ A Q
Sbjct: 125 AGGCRPNAFTYNALVDG-LCKQDRLDA-ARAVITEARKRDF---APDVVTYNTLMAALFQ 179
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
VD+ A F ++ E P + ++N ++ + + + V + M P+++T
Sbjct: 180 LGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVT 239
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
++++ID K D+ +Q+ ++ +P L + +++ + A A + ++M
Sbjct: 240 YSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMV 299
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ P +TY +I V A EIF EL V T +A++ YC
Sbjct: 300 SQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVD 359
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
E + M P+ TY + + + E + + M + G VP+ R +
Sbjct: 360 EGGKVM---REMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTY 412
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 132/313 (42%), Gaps = 10/313 (3%)
Query: 155 MGKKGQTRLAMWLFSEMRNSGCRPDPSV-YNALITAHLHTRDKAKALAKALGYFQKMKGM 213
M + G A+ LF E N P SV YN LI + D L A ++M +
Sbjct: 1 MVRAGSHNQALQLFRE--NPCQLPASSVTYNVLIRGFCNASD----LDAAFSLLREMD-V 53
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILA-PDIYTYNGVMDAYGKNGMIK 272
E + N T +I+L+ + V Q F E A PD+ +Y +++ K G +
Sbjct: 54 EGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVD 113
Query: 273 EMESVLSRM-KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM 331
+ +M + C+P+ T+N L+D K+ D V P + T+N++
Sbjct: 114 AAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTL 173
Query: 332 IINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGK 391
+ + +A F +MT Y P+ +++ IIT ++ A E+F+E+
Sbjct: 174 MAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDF 233
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
+ T + +++ C + EA L + + G PD Y L ++ A +
Sbjct: 234 HPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALG 293
Query: 452 LLKRMEQNGIVPN 464
LL+RM G +P+
Sbjct: 294 LLRRMVSQGCIPD 306
>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
Length = 455
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 147/320 (45%), Gaps = 9/320 (2%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA--HLHTRDKAKALAKAL 204
I++ + K G AM +F++MR G PD Y ALI A L D A+
Sbjct: 32 IFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGRVDDAEV----- 86
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
F +M E PNIV ++ L+ ++V LF E+ + P+I +N ++
Sbjct: 87 -KFNQMIN-EGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCN 144
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
K G + E + ++ ++ +PD+I++N LID + D+ ++ + ++ KP
Sbjct: 145 LCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPN 204
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
++N+++ Y KA A +F+KM + TP +TY I+ S A+E++
Sbjct: 205 SFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYL 264
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ G + T N +L C + EA +F++ + G+ + T+ ++ A K
Sbjct: 265 NMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGG 324
Query: 445 MKELVQKLLKRMEQNGIVPN 464
KE L + NG+VP+
Sbjct: 325 RKEDAMDLFAAIPANGLVPD 344
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 102/215 (47%), Gaps = 4/215 (1%)
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
++P+ + +N AY K GMI + + ++M+ + PD +++ LID+ K D E
Sbjct: 26 ISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGRVDDAE 85
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQG--KAEYVFQKMTAMKYTPSFITYECIIT 368
F +++ P + F+S++ YG + K E +F +M + P+ + + I+
Sbjct: 86 VKFNQMINEGVTPNIVVFSSLV--YGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILC 143
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
V + + D + +G V + N +++ +C+ G EA L E ++G+ P
Sbjct: 144 NLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKP 203
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
+S +Y L Y KA + L ++M NGI P
Sbjct: 204 NSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITP 238
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 100/216 (46%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
PN +NI A A+ +D+ +F ++ + L+PD +Y ++DA K G + + E
Sbjct: 28 PNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGRVDDAEVK 87
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
++M + P+I+ F+ L+ ++K+E++F +++ P + FN+++ N K
Sbjct: 88 FNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCK 147
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
+ + + + M P I+Y +I + + A ++ + + +G +
Sbjct: 148 EGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFS 207
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
N +L YC G A LF + G+TP TY
Sbjct: 208 YNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTY 243
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 4/206 (1%)
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ YG G + EM +L+ M +N P+ FN+ +Y K DK +F +
Sbjct: 1 MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSR 378
P ++ ++I K AE F +M TP+ + + ++ YG C D +
Sbjct: 61 LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLV--YGLCSIDKWEK 118
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
E+F E+ +G + N +L C G E L ++ MGV PD +Y L
Sbjct: 119 VEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLID 178
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPN 464
+ A + KLL+ M G+ PN
Sbjct: 179 GHCLAGTIDEASKLLEGMVSVGLKPN 204
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/314 (19%), Positives = 120/314 (38%), Gaps = 33/314 (10%)
Query: 123 DKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSV 182
DKW + E+F M + + ++ ++ + K+G+ L + G RPD
Sbjct: 114 DKWEKVEELFFEMLNVGIH-PNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVIS 172
Query: 183 YNALITAH-------------------------------LHTRDKAKALAKALGYFQKMK 211
YN LI H LH KA + A F+KM
Sbjct: 173 YNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKML 232
Query: 212 GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMI 271
P +VTYN +L Q + + L+ + S IYTYN +++ K+ +
Sbjct: 233 S-NGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCV 291
Query: 272 KEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM 331
E + + S + +IITF ++I + K + +F ++ + P + T+ +
Sbjct: 292 DEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVV 351
Query: 332 IINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGK 391
N + + + +F M P+ ++ + ++SRA +L +
Sbjct: 352 AENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNF 411
Query: 392 DMKVSTLNAMLEAY 405
++ ST + ++ +
Sbjct: 412 SVEASTTSMLISIF 425
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 60/138 (43%)
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
M+ YG + + M A +P+ + + Y C + +A +IF+++ + G
Sbjct: 1 MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
+ A+++A C G +A++ F N GVTP+ + L + E V+
Sbjct: 61 LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVE 120
Query: 451 KLLKRMEQNGIVPNKRFF 468
+L M GI PN FF
Sbjct: 121 ELFFEMLNVGIHPNIVFF 138
>gi|410110131|gb|AFV61145.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rehmannii]
Length = 379
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 133/276 (48%), Gaps = 5/276 (1%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
D +YS LI + K A+ +FS ++ SG PD YNA+I KAK +
Sbjct: 3 GDLVLYSNLIELSRKLCDYSKAIAIFSRLKRSGFTPDLVAYNAMINVF----GKAKLFRE 58
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A +MK PN +Y+ LL + + + ++F E+ E D+ T N ++
Sbjct: 59 ARSLIGEMK-TAGVMPNTSSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMI 117
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D YG+ GM KE + + M+ +P+++++N L+ YG + F + +F+ + +
Sbjct: 118 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 177
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
+ T+NSM++ YGK KA + Q+M + P+ ITY II+++G + RA +
Sbjct: 178 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAML 237
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
F +L G ++ M+ AY GL A L
Sbjct: 238 FQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLL 273
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 130/263 (49%), Gaps = 1/263 (0%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+KA+ F ++K P++V YN ++ +A+ + +L E+ + + P+ +Y+
Sbjct: 22 SKAIAIFSRLK-RSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKTAGVMPNTSSYST 80
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ Y +N E SV S M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 81 LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 140
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P + ++N+++ YG A L G+A ++F+ M + +TY ++ +YG +A
Sbjct: 141 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 200
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ E+ G + T + ++ + G A +LF+ + GV D ++ + AY
Sbjct: 201 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY 260
Query: 441 TKANMKELVQKLLKRMEQNGIVP 463
+A + ++LL +++ +P
Sbjct: 261 ERAGLVAHAKRLLHELKRPDNIP 283
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 147/323 (45%), Gaps = 19/323 (5%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L EM+ +G P+ S Y+ L+T ++
Sbjct: 32 KRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKTAGVMPNTSSYSTLLTMYVEN--- 88
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
K +AL F +M+ + +C ++ T NI++ Q + + LF + + + P++
Sbjct: 89 -KKFLEALSVFSEMREI-KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVV 146
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+YN ++ YG + E + M+ + +++T+N ++ YGK +K + + +
Sbjct: 147 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEM 206
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P T++++I +GK +A +FQK+ + I ++ +I Y V
Sbjct: 207 QSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLV 266
Query: 377 SRAREIFDELSK---LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ A+ + EL + + +D + L G EA +F + + G D + +
Sbjct: 267 AHAKRLLHELKRPDNIPRDTAIHILAGA-------GRIEEATYVFRQAIDAGEVKDITVF 319
Query: 434 K----LLYKAYTKANMKELVQKL 452
+ LL K AN+ E+ K+
Sbjct: 320 ERMIHLLSKYKKYANVVEVFDKM 342
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 118/250 (47%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
++V Y+ L+ + + + A+F L S PD+ YN +++ +GK + +E S++
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAIAIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
MK+ P+ +++ L+ Y + + F + VF + K L T N MI YG+
Sbjct: 64 GEMKTAGVMPNTSSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
+ +A+ +F M M P+ ++Y ++ +YG + A +F + + + V T
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 183
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N+M+ Y +A+ L + + G+ P+S TY + + K + L +++
Sbjct: 184 NSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 243
Query: 459 NGIVPNKRFF 468
+G+ ++ F
Sbjct: 244 SGVEIDQILF 253
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 127/299 (42%), Gaps = 37/299 (12%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
++ K+L+ L VF M++ + + D + +I V G+ G + A LF MR G P+
Sbjct: 87 ENKKFLEALSVFSEMREIKCLL-DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 145
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
YN L L A+ +A+ F+ M+ + + N+VTYN ++ + ++ N
Sbjct: 146 VSYNTL----LRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVTYNSMMMIYGKTLEHEKAN 200
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
L +E+ + P+ TY+ ++ +GK G + + +++S+ + D I F +I +Y
Sbjct: 201 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY 260
Query: 301 --------GKRQAFD--------------------KMEQ---VFKSLMHSKEKPTLPTFN 329
KR + ++E+ VF+ + + E + F
Sbjct: 261 ERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFE 320
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
MI K + VF KM + Y P ++ YG +A +++ E+ +
Sbjct: 321 RMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQXFDKANDVYMEMQE 379
>gi|218190347|gb|EEC72774.1| hypothetical protein OsI_06434 [Oryza sativa Indica Group]
Length = 579
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 177/400 (44%), Gaps = 46/400 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K+ Q +VF M KQ+ + D Y+ LI + GK G+T + F EM +
Sbjct: 168 MLLDALAKAGMVDQAFQVFEDM-KQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVS 226
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
GC + +N +I A K K + K + KM + C+PN TY+I L A
Sbjct: 227 KGCVLNLIAFNTIIEA----LGKNKMVDKVIFVLSKMVEND-CQPNQFTYSITLDILATE 281
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD---- 289
+ ++N + ++ + IY+Y ++ + K+G E +V RM ++ K D
Sbjct: 282 GQLHRLNEVL-DICSRFMNRSIYSY--LVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAF 338
Query: 290 ---------------------------IIT----FNLLIDSYGKRQAFDKMEQVFKSLMH 318
I+T +N++ + GK + + +F +
Sbjct: 339 VSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKT 398
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
+ P + T+N MI +YG+ L KA +F+ M A P +TY +I G ++
Sbjct: 399 NGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDE 458
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A +F E+ + G D V T + ++E + + A LF+ + G TP+ TY +L
Sbjct: 459 AHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLD 518
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNKRFF--LEALETFS 476
+ E KL + M+Q G++P+ + LE LE+ S
Sbjct: 519 CLERRGKTEEAHKLYETMKQQGLIPDSITYSILERLESRS 558
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 150/385 (38%), Gaps = 43/385 (11%)
Query: 127 QCLEVFRWMQKQRWYIADTG-IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
+CLE+ +W + +G Y ++ + + ++ EMR G + D YN
Sbjct: 114 RCLEL-----ASKWGLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNM 168
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
L+ A KA + +A F+ MK + C P+ TY IL+R +A + + F E
Sbjct: 169 LLDA----LAKAGMVDQAFQVFEDMK-QKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDE 223
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ ++ +N +++A GKN M+ ++ VLS+M N C+P+ T+++ +D
Sbjct: 224 MVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQ 283
Query: 306 FDKMEQV--------------------------------FKSLMHSKEKPTLPTFNSMII 333
++ +V F + +S EK F SM+
Sbjct: 284 LHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLE 343
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
A +A + M Y + + G VS +FD++ G
Sbjct: 344 VLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIP 403
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
V T N M+ +Y GL +A LFE PD TY L K + L
Sbjct: 404 DVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLF 463
Query: 454 KRMEQNGIVPNKRFFLEALETFSSS 478
K M++ G P+ + +E F S
Sbjct: 464 KEMQEKGYDPDVFTYSILIECFGKS 488
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 144/357 (40%), Gaps = 47/357 (13%)
Query: 144 DTGIYSKLIAVMGK-KGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
D Y++++A++ + + A+ L ++M G + S N L+ + + L
Sbjct: 59 DAFSYNRILALLFRTRAGPSEALRLVADMERDGVAGNISTINLLVGMGGGGVEVERCLEL 118
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A + ++ G TY +++A ++R V + +++E+ DI+ YN ++
Sbjct: 119 ASKWGLRLSGY--------TYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLL 170
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
DA K GM+ + V MK C PD T+ +LI GK K F ++
Sbjct: 171 DALAKAGMVDQAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCV 230
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
L FN++I GK ++ K +V KM P+ TY + + + R E+
Sbjct: 231 LNLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEV 290
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF---ENSH----------------- 422
D S+ M S + ++++ C +G +EA +F NSH
Sbjct: 291 LDICSRF---MNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCN 347
Query: 423 ---------------NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G+ D Y +++ A K + L +M+ NGI+P+
Sbjct: 348 AEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPD 404
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 161/366 (43%), Gaps = 51/366 (13%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
QR D Y ++ + K+G LA+ L ++M + + + ++N +I + K
Sbjct: 216 QRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC----KY 271
Query: 198 KALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
+ + A+ F +M KG+ +PN+VTYN L+ + L + E + P++
Sbjct: 272 RHVEVAVDLFTEMETKGI---RPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNV 328
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
T+N ++DA+ K G + E E + M PD IT+NLLI+ + D+ +Q+FK
Sbjct: 329 VTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKF 388
Query: 316 LMHSKEKPTLPTFNSMIINYGKAR---------------------------LQG------ 342
++ P + T+N++I + K + +QG
Sbjct: 389 MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGD 448
Query: 343 --KAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTL 398
A+ VF++M + + +TY I ++G C + A IF L K ++ +
Sbjct: 449 CDSAQMVFKQMVSNRVPTDIMTYS--ILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIY 506
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N M+E C G EA LF ++ + PD TY + + + L ++M++
Sbjct: 507 NTMIEGMCKAGKVGEAWDLF---CSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKE 563
Query: 459 NGIVPN 464
+G +PN
Sbjct: 564 DGTLPN 569
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 150/329 (45%), Gaps = 10/329 (3%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
Y DT ++ LI + + A+ L +M GC+PD Y ++ D +
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD----I 239
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
AL KM+ R K N+V +N ++ + + R+V+ LF E+ + P++ TYN
Sbjct: 240 DLALNLLNKMEA-ARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNS 298
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
+++ G + +LS M + P+++TFN LID++ K + E++ + ++
Sbjct: 299 LINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P T+N +I + +A+ +F+ M + P+ TY +I + C V
Sbjct: 359 IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGV 418
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK-- 438
E+F E+S+ G T +++ + G A ++F+ + V D TY +L
Sbjct: 419 ELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGL 478
Query: 439 -AYTKANMKELVQKLLKR--MEQNGIVPN 464
+Y K + ++ K L++ ME N + N
Sbjct: 479 CSYGKLDTALVIFKYLQKSEMELNIFIYN 507
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 150/335 (44%), Gaps = 11/335 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS I ++ Q LA+ + ++M G PD ++L+ + H+ K ++ A
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS----KRISDA 172
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ +M M KP+ T+ L+ + AL ++ + PD+ TY V++
Sbjct: 173 VALVDQMVEMGY-KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K G I ++L++M++ + K +++ FN +IDS K + + +F + +P
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 324 TLPTFNSMI---INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+ T+NS+I NYG+ A + M K P+ +T+ +I + + A
Sbjct: 292 NVVTYNSLINCLCNYGR---WSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAE 348
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
++ +E+ + D T N ++ +CM+ EA +F+ + P+ TY L +
Sbjct: 349 KLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
K E +L + M Q G+V N + ++ F
Sbjct: 409 CKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 139/317 (43%), Gaps = 5/317 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++KL++ + K + L + L +M+ G D Y+ I + L+ AL
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFC----RRSQLSLALAVL 141
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
KM + +P+IVT + LL ++ + AL ++ E PD +T+ ++
Sbjct: 142 AKMMKLGY-EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ E +++ +M C+PD++T+ +++ KR D + + ++ K +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
FN++I + K R A +F +M P+ +TY +I S A + +
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ + V T NA+++A+ G EA+ L E + PD+ TY LL + N +
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 448 LVQKLLKRMEQNGIVPN 464
+++ K M +PN
Sbjct: 381 EAKQMFKFMVSKDCLPN 397
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 4/260 (1%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+IV +N LL A A+ + V +L +++ ++ D+YTY+ ++ + + + +V
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L++M +PDI+T + L++ Y + + ++ KP TF ++I
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKV 395
+A + +M P +TY ++ G C ++ A + +++ V
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVN--GLCKRGDIDLALNLLNKMEAARIKANV 258
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
N ++++ C A LF G+ P+ TY L +LL
Sbjct: 259 VIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSN 318
Query: 456 MEQNGIVPNKRFFLEALETF 475
M + I PN F ++ F
Sbjct: 319 MLEKKINPNVVTFNALIDAF 338
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 152/356 (42%), Gaps = 9/356 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ + L + + Q LE F + D Y+ LI + K G+ A LF +M
Sbjct: 15 IILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVA 74
Query: 174 SG-CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
+G CRP+ YNAL+ L +D+ A + +K P++VTYN L+ A Q
Sbjct: 75 AGGCRPNAFTYNALVDG-LCKQDRLDAARAVIAEARKRDF----APDVVTYNTLMAALFQ 129
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
VD+ A F ++ E P + ++N ++ + + + V + M P+++T
Sbjct: 130 LGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVT 189
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
++++ID K D+ +Q+ ++ +P L + +++ + A A + ++M
Sbjct: 190 YSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMV 249
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ P +TY +I V A EIF EL V T +A++ YC
Sbjct: 250 SQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVD 309
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
E + M P+ TY + + + E + + M + G VP+ R +
Sbjct: 310 EGGKVM---REMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTY 362
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 105/245 (42%), Gaps = 2/245 (0%)
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILA-PDIYTYNGVMDAYGKNGMIKEMESVLSR 280
T +I+L+ + V Q F E A PD+ +Y +++ K G + + +
Sbjct: 12 TTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRK 71
Query: 281 M-KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
M + C+P+ T+N L+D K+ D V P + T+N+++ +
Sbjct: 72 MVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLG 131
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLN 399
+A F +MT Y P+ +++ IIT ++ A E+F+E+ + T +
Sbjct: 132 RVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYS 191
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
+++ C + EA L + + G PD Y L ++ A + LL+RM
Sbjct: 192 VVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQ 251
Query: 460 GIVPN 464
G +P+
Sbjct: 252 GCIPD 256
>gi|410110079|gb|AFV61119.1| pentatricopeptide repeat-containing protein 123, partial [Junellia
succulentifolia]
Length = 382
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 131/277 (47%), Gaps = 5/277 (1%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
D +YS LI + K A+ +FS ++ SG PD YNA+I KAK
Sbjct: 3 GDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINVF----GKAKLFRD 58
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A +M+ PN +Y+ LL + + + ++F E+ E D+ T N ++
Sbjct: 59 ARSLISEMR-TAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMI 117
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D YG+ GM KE + + M+ +P+++++N L+ YG + F + +F+ + +
Sbjct: 118 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 177
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
+ T+NSM++ YGK KA + Q+M P+ ITY II+++G + RA +
Sbjct: 178 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAML 237
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
F +L G D+ M+ AY GL A L
Sbjct: 238 FQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLH 274
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 155/343 (45%), Gaps = 15/343 (4%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ ++ D Y+ +I V GK R A L SEMR +G P+ + Y+ L+T ++
Sbjct: 32 KRSGFMPDLVAYNAMINVFGKAKLFRDARSLISEMRTAGVTPNTASYSTLLTMYVEN--- 88
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
K +AL F +M+ + +C ++ T NI++ Q + + LF + + + P++
Sbjct: 89 -KKFLEALSVFAEMREI-KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVV 146
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+YN ++ YG + E + M+ + +++T+N ++ YGK +K + + +
Sbjct: 147 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEM 206
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+ +P T++++I +GK +A +FQK+ + + Y+ +I Y V
Sbjct: 207 QNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLV 266
Query: 377 SRAREIFDELSK---LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ A+ + EL + + +D+ + L G EA +F + + G D + +
Sbjct: 267 AHAKRLLHELKRPDNIPRDIAIHILAGA-------GRIEEATWVFRQAIDAGXVKDITVF 319
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+ + ++K V ++ +M G P+ L +
Sbjct: 320 ERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYG 362
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 129/263 (49%), Gaps = 1/263 (0%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+KA+ F ++K P++V YN ++ +A+ +L E+ + + P+ +Y+
Sbjct: 22 SKAISIFSRLK-RSGFMPDLVAYNAMINVFGKAKLFRDARSLISEMRTAGVTPNTASYST 80
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ Y +N E SV + M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 81 LLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 140
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P + ++N+++ YG A L G+A ++F+ M + +TY ++ +YG +A
Sbjct: 141 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 200
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ E+ G + T + ++ + G A +LF+ + GV D Y+ + AY
Sbjct: 201 NLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAY 260
Query: 441 TKANMKELVQKLLKRMEQNGIVP 463
+A + ++LL +++ +P
Sbjct: 261 ERAGLVAHAKRLLHELKRPDNIP 283
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 116/243 (47%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
++V Y+ L+ + + + ++F L S PD+ YN +++ +GK + ++ S++
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFRDARSLI 63
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
S M++ P+ +++ L+ Y + + F + VF + K L T N MI YG+
Sbjct: 64 SEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
+ +A+ +F M M P+ ++Y ++ +YG + A +F + + + V T
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 183
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N+M+ Y +A+ L + N G+ P+S TY + + K + L +++
Sbjct: 184 NSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 243
Query: 459 NGI 461
+G+
Sbjct: 244 SGV 246
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%)
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
D++ ++ LI+ K + K +F L S P L +N+MI +GKA+L A +
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFRDARSLI 63
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
+M TP+ +Y ++TMY A +F E+ ++ + ++T N M++ Y
Sbjct: 64 SEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G+ EAD LF MG+ P+ +Y L + Y A + L + M++ I N
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 179
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 85/189 (44%)
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
S+ SR+K + PD++ +N +I+ +GK + F + + + P ++++++ Y
Sbjct: 26 SIFSRLKRSGFMPDLVAYNAMINVFGKAKLFRDARSLISEMRTAGVTPNTASYSTLLTMY 85
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
+ + +A VF +M +K T +I +YG A ++F + K+G + V
Sbjct: 86 VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 145
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+ N +L Y L EA LF + + TY + Y K E L++
Sbjct: 146 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 205
Query: 456 MEQNGIVPN 464
M+ GI PN
Sbjct: 206 MQNRGIEPN 214
>gi|222622462|gb|EEE56594.1| hypothetical protein OsJ_05954 [Oryza sativa Japonica Group]
Length = 579
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 177/400 (44%), Gaps = 46/400 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K+ Q +VF M KQ+ + D Y+ LI + GK G+T + F EM +
Sbjct: 168 MLLDALAKAGMVDQAFQVFEDM-KQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVS 226
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
GC + +N +I A K K + K + KM + C+PN TY+I L A
Sbjct: 227 KGCVLNLIAFNTIIEA----LGKNKMVDKVIFVLSKMVEND-CQPNQFTYSITLDILATE 281
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD---- 289
+ ++N + ++ + IY+Y ++ + K+G E +V RM ++ K D
Sbjct: 282 GQLHRLNEVL-DICSRFMNRSIYSY--LVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAF 338
Query: 290 ---------------------------IIT----FNLLIDSYGKRQAFDKMEQVFKSLMH 318
I+T +N++ + GK + + +F +
Sbjct: 339 VSMLEVLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKT 398
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
+ P + T+N MI +YG+ L KA +F+ M A P +TY +I G ++
Sbjct: 399 NGIIPDVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDE 458
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A +F E+ + G D V T + ++E + + A LF+ + G TP+ TY +L
Sbjct: 459 AHMLFKEMQEKGYDPDVFTYSILIECFGKSNKVEMACSLFDEMISEGCTPNIVTYNILLD 518
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNKRFF--LEALETFS 476
+ E KL + M+Q G++P+ + LE LE+ S
Sbjct: 519 CLERRGKTEEAHKLYETMKQQGLIPDSITYSILERLESRS 558
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 150/385 (38%), Gaps = 43/385 (11%)
Query: 127 QCLEVFRWMQKQRWYIADTG-IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
+CLE+ +W + +G Y ++ + + ++ EMR G + D YN
Sbjct: 114 RCLEL-----ASKWGLRLSGYTYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNM 168
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
L+ A KA + +A F+ MK + C P+ TY IL+R +A + + F E
Sbjct: 169 LLDA----LAKAGMVDQAFQVFEDMK-QKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDE 223
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ ++ +N +++A GKN M+ ++ VLS+M N C+P+ T+++ +D
Sbjct: 224 MVSKGCVLNLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQ 283
Query: 306 FDKMEQV--------------------------------FKSLMHSKEKPTLPTFNSMII 333
++ +V F + +S EK F SM+
Sbjct: 284 LHRLNEVLDICSRFMNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLE 343
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
A +A + M Y + + G VS +FD++ G
Sbjct: 344 VLCNAEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIP 403
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
V T N M+ +Y GL +A LFE PD TY L K + L
Sbjct: 404 DVFTYNIMISSYGRVGLVDKASELFEVMEASSCKPDVVTYNSLINCLGKHGDLDEAHMLF 463
Query: 454 KRMEQNGIVPNKRFFLEALETFSSS 478
K M++ G P+ + +E F S
Sbjct: 464 KEMQEKGYDPDVFTYSILIECFGKS 488
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 144/357 (40%), Gaps = 47/357 (13%)
Query: 144 DTGIYSKLIAVMGK-KGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
D Y++++A++ + + A+ L ++M G + S N L+ + + L
Sbjct: 59 DAFSYNRILALLFRTRAGPSEALRLVADMERDGVAGNISTINLLVGMGGGGVEMERCLEL 118
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A + ++ G TY +++A ++R V + +++E+ DI+ YN ++
Sbjct: 119 ASKWGLRLSGY--------TYKCIVQAHLRSREVSKGFQVYEEMRRKGYKLDIFAYNMLL 170
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
DA K GM+ + V MK C PD T+ +LI GK K F ++
Sbjct: 171 DALAKAGMVDQAFQVFEDMKQKHCVPDAYTYTILIRMSGKAGRTSKFLSFFDEMVSKGCV 230
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
L FN++I GK ++ K +V KM P+ TY + + + R E+
Sbjct: 231 LNLIAFNTIIEALGKNKMVDKVIFVLSKMVENDCQPNQFTYSITLDILATEGQLHRLNEV 290
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF---ENSH----------------- 422
D S+ M S + ++++ C +G +EA +F NSH
Sbjct: 291 LDICSRF---MNRSIYSYLVKSLCKSGHASEAHNVFCRMWNSHEKGDRDAFVSMLEVLCN 347
Query: 423 ---------------NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G+ D Y +++ A K + L +M+ NGI+P+
Sbjct: 348 AEKTLEAIDLLHMMPEKGIVTDVGMYNMVFSALGKLKQVSFISNLFDKMKTNGIIPD 404
>gi|302808451|ref|XP_002985920.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
gi|300146427|gb|EFJ13097.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
Length = 574
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 132/305 (43%), Gaps = 5/305 (1%)
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
F W +KQ + D Y+ ++ ++G+ + L EM GC P+ YN LI
Sbjct: 54 FIWARKQAGFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLI---- 109
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
H +A L +L F M+ M C+P+ VTY L+ A+A D L++++ +
Sbjct: 110 HCYGRANDLDSSLKLFNVMQ-MVGCEPDRVTYCTLIDLQAKAGFHDAAMELYRQMQHAGF 168
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
PD +TY+ ++ GK G + + M P ++T+N++ID + K FD +
Sbjct: 169 RPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALK 228
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
++ L P T+ ++ G AE VF++M + + ++ M+G
Sbjct: 229 LYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMWG 288
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
N +A + F+ + G V N++L AY + A + G+ P
Sbjct: 289 KTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGMAKWGLYPTLQ 348
Query: 432 TYKLL 436
TY L
Sbjct: 349 TYTSL 353
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 132/296 (44%), Gaps = 22/296 (7%)
Query: 94 EPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIA 153
EP V T N+ + HC+ G+++ L++F MQ D Y LI
Sbjct: 99 EPNVVTYNRLI------HCY------GRANDLDSSLKLFNVMQMVGCE-PDRVTYCTLID 145
Query: 154 VMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGM 213
+ K G AM L+ +M+++G RPD Y+ +I H KA L A F +M
Sbjct: 146 LQAKAGFHDAAMELYRQMQHAGFRPDTFTYSIII----HCLGKAGKLNAAYKLFCEMTD- 200
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
P++VTYNI++ A+A D L+ +L E APD TY +M+ G G I++
Sbjct: 201 RGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIED 260
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
E V M+ D F L++D +GK +K Q F ++ S +P +P NS++
Sbjct: 261 AEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLS 320
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
Y ++ A V M P+ TY +++ C RA +D L L
Sbjct: 321 AYLRSSFYDAAGGVLGGMAKWGLYPTLQTYTSLLSSCAAC----RAAWEYDALFGL 372
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 129/289 (44%), Gaps = 5/289 (1%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
K ++ TY +L +A++ D +N L E+ P++ TYN ++ YG+ +
Sbjct: 64 KHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSSLK 123
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+ + M+ C+PD +T+ LID K D ++++ + H+ +P T++ +I G
Sbjct: 124 LFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMELYRQMQHAGFRPDTFTYSIIIHCLG 183
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
KA A +F +MT Y PS +TY II ++ A +++ +L ++G
Sbjct: 184 KAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRV 243
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
T ++E G +A+ +FE G D+ + L+ + K E + RM
Sbjct: 244 TYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKAAQWFNRM 303
Query: 457 EQNGIVPNK---RFFLEAL--ETFSSSLAGSQSGSAKTDLTRSLSTAKS 500
+G+ PN L A +F + G G AK L +L T S
Sbjct: 304 LDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGMAKWGLYPTLQTYTS 352
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 121/267 (45%), Gaps = 7/267 (2%)
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
E C+PN+VTYN L+ +A ++D LF + PD TY ++D K G
Sbjct: 96 EGCEPNVVTYNRLIHCYGRANDLDSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDA 155
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
+ +M+ +PD T++++I GK + ++F + P+L T+N +I
Sbjct: 156 AMELYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIID 215
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
+ KA A ++ + + Y P +TY I+ + G C ++ A ++F+E+ + G
Sbjct: 216 LHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVA 275
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
M++ + G +A F + G+ P+ L AY +++ + +L
Sbjct: 276 DNPIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVL 335
Query: 454 KRMEQNGIVPNKRFFLEALETFSSSLA 480
M + G+ P L+T++S L+
Sbjct: 336 GGMAKWGLYPT-------LQTYTSLLS 355
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 102/228 (44%), Gaps = 6/228 (2%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
+E++R MQ + DT YS +I +GK G+ A LF EM + G P YN +I
Sbjct: 157 MELYRQMQHAG-FRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIID 215
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
H KA AL + ++ + P+ VTY I++ +++ +F+E+
Sbjct: 216 LHA----KAGKFDMALKLYSDLQEVGY-APDRVTYGIIMEVLGNCGHIEDAEQVFEEMER 270
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
+ D + ++D +GK G ++ +RM + +P++ N L+ +Y + +D
Sbjct: 271 AGWVADNPIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDA 330
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
V + PTL T+ S++ + R + + +F M +
Sbjct: 331 AGGVLGGMAKWGLYPTLQTYTSLLSSCAACRAAWEYDALFGLMGGTGH 378
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 157/384 (40%), Gaps = 51/384 (13%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+R YI D Y+ LI + + + A LF M+ GC P+ Y LI T +
Sbjct: 154 RRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGN-- 211
Query: 198 KALAKALGYFQKM-KGME----RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILA 252
+ AL Q+M G CKPNI +YNI++ + + LF E+ + +
Sbjct: 212 --INLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVR 269
Query: 253 PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
PD+ T++ ++D K GM+ E + L M PD+ TF LI+ + D +++
Sbjct: 270 PDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKEL 329
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT---------- 362
F S+ +P + ++ +I Y K +A ++ +M + P T
Sbjct: 330 FLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFL 389
Query: 363 -----------------------YECIITMYGYCDN--VSRAREIFDELSKLGKDMKVST 397
Y C + + G C N + A E+F+EL + + +
Sbjct: 390 AGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIES 449
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
N +++ C A LFE G+ PD TY ++ + K + L + ME
Sbjct: 450 FNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMME 509
Query: 458 QNGIVPNKRFFLEALETFSSSLAG 481
+NG PN L T+S+ L G
Sbjct: 510 ENGCTPN-------LLTYSALLHG 526
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 138/348 (39%), Gaps = 41/348 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ +EL K KW + +F M Q D +S LI + K+G A M
Sbjct: 242 IIIDELCKIGKWKEAKRLFNEMVDQGVR-PDVVTFSALIDTLCKEGMVIEAKKFLETMML 300
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G PD + +LI D A K L KG E P++++Y +L+ +
Sbjct: 301 RGIVPDLFTFTSLIEGFCLVGDLDSA--KELFLSMPSKGYE---PDVISYTVLIYGYCKT 355
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
NV++ L+ E+ PD+ T+ ++ G + + + + +K + ++
Sbjct: 356 FNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYIC 415
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
++ +D K + ++F L K + +FN +I KAR A +F+K++
Sbjct: 416 SVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQ 475
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P +TY CI+ + G+C NG
Sbjct: 476 EGLQPDVVTY-CIM-INGFCK---------------------------------NGQVDN 500
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
A++LF+ G TP+ TY L + K N E V KLL +M Q +
Sbjct: 501 ANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDV 548
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 112/251 (44%), Gaps = 6/251 (2%)
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
I+++N+LL A A+ ++ QV +L+K++H + L+P+ +T N +++ ++E S ++
Sbjct: 91 IISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMA 150
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
+ PD++T+ LI + ++F + P + T+ ++I +
Sbjct: 151 GIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTG 210
Query: 340 LQGKAEYVFQKMT------AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
A + Q+M A+ P+ +Y II A+ +F+E+ G
Sbjct: 211 NINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRP 270
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
V T +A+++ C G+ EA E G+ PD T+ L + + + ++L
Sbjct: 271 DVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELF 330
Query: 454 KRMEQNGIVPN 464
M G P+
Sbjct: 331 LSMPSKGYEPD 341
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 20/176 (11%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM 171
C + + L K+ + +E+F ++ + D ++ LI + K + A LF ++
Sbjct: 415 CSVFLDGLCKNGCLFEAMELFNELKSYNMKL-DIESFNCLIDGLCKARKLETAWELFEKL 473
Query: 172 RNSGCRPDPSVYNALITAHLHTR--DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA 229
G +PD Y +I D A L FQ M+ C PN++TY+ LL
Sbjct: 474 SQEGLQPDVVTYCIMINGFCKNGQVDNANIL------FQMMEE-NGCTPNLLTYSALLHG 526
Query: 230 CAQARNVDQVNALFKELHESI-----LAPDIYTYNGVMDAYGKNGMIKEMESVLSR 280
+ +++V K LH+ I LA IYT V D K+ +E +L R
Sbjct: 527 FYKNNKLEEV---VKLLHKMIQKDVSLAASIYTI--VEDMVSKDEKCREWLDILQR 577
>gi|410110071|gb|AFV61115.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
macrostachya]
Length = 437
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 141/308 (45%), Gaps = 7/308 (2%)
Query: 134 WMQK--QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
W+QK Q D +YS LI + K A+ +FS ++ SG PD YNA+I
Sbjct: 34 WLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVF- 92
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KAK +A +M+ PN +Y+ LL + + + ++F E+ E
Sbjct: 93 ---GKAKLFREARSLISEMR-TAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIKC 148
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
D+ T N ++D YG+ GM KE + + M+ +P+++++N L+ YG + F +
Sbjct: 149 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 208
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+F + + T+NSM++ YGK KA + Q+M P+ ITY II+++G
Sbjct: 209 LFXLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWG 268
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ RA +F +L G ++ M+ AY GL A L + P +
Sbjct: 269 KVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKSPDNIPRDT 328
Query: 432 TYKLLYKA 439
+L A
Sbjct: 329 AIHILAGA 336
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 152/327 (46%), Gaps = 5/327 (1%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
+QR D YS LI GK+G A+ +M D +Y+ LI D
Sbjct: 4 RQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 63
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+KA++ F ++K P++V YN ++ +A+ + +L E+ + + P+
Sbjct: 64 SKAIS----IFSRLK-RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTA 118
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+Y+ ++ Y +N E SV S M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 119 SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 178
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P + ++N+++ YG A L G+A ++F M + +TY ++ +YG
Sbjct: 179 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFXLMQRKNIVQNVVTYNSMMMIYGKTLEH 238
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A + E+ G + T + ++ + G A +LF+ + GV D Y+ +
Sbjct: 239 EKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTM 298
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVP 463
AY +A + ++LL ++ +P
Sbjct: 299 IVAYERAGLVAHAKRLLHELKSPDNIP 325
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 136/293 (46%), Gaps = 5/293 (1%)
Query: 169 SEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLR 228
EMR PD Y+ LIT H K AL + QKM+ +R ++V Y+ L+
Sbjct: 1 DEMRQRALSPDRYTYSTLIT-HF---GKEGLFDAALSWLQKME-QDRVPGDLVLYSNLIE 55
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
+ + + ++F L S PD+ YN +++ +GK + +E S++S M++ P
Sbjct: 56 LSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMP 115
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
+ +++ L+ Y + + F + VF + K L T N MI YG+ + +A+ +F
Sbjct: 116 NTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 175
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
M M P+ ++Y ++ +YG + A +F + + V T N+M+ Y
Sbjct: 176 WGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFXLMQRKNIVQNVVTYNSMMMIYGKT 235
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+A+ L + N G+ P+S TY + + K + L +++ +G+
Sbjct: 236 LEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 288
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 109/220 (49%)
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
E+ + L+PD YTY+ ++ +GK G+ S L +M+ ++ D++ ++ LI+ K
Sbjct: 2 EMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLC 61
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
+ K +F L S P L +N+MI +GKA+L +A + +M P+ +Y
Sbjct: 62 DYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYS 121
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
++TMY A +F E+ ++ + ++T N M++ Y G+ EAD LF M
Sbjct: 122 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 181
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G+ P+ +Y L + Y A + L M++ IV N
Sbjct: 182 GIEPNVVSYNTLLRVYGDAELFGEAIHLFXLMQRKNIVQN 221
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 149/360 (41%), Gaps = 42/360 (11%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L SEMR +G P+ + Y+ L+T ++
Sbjct: 74 KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVEN--- 130
Query: 197 AKALAKALGYFQKMK--------------------------------GMER--CKPNIVT 222
K +AL F +M+ GM + +PN+V+
Sbjct: 131 -KKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 189
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
YN LLR A + LF + + ++ TYN +M YGK ++ +++ M+
Sbjct: 190 YNTLLRVYGDAELFGEAIHLFXLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQ 249
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
+ +P+ IT++ +I +GK D+ +F+ L S + + +MI+ Y +A L
Sbjct: 250 NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVA 309
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
A+ + ++ +P I + I + + A +F + G+ + M+
Sbjct: 310 HAKRLLHELK----SPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDIMVFERMI 365
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+ +F+ +G PDS+ L+ AY K + + + M++ G V
Sbjct: 366 HLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANGVYMEMQEVGCV 425
>gi|255661208|gb|ACU25773.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 426
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 157/327 (48%), Gaps = 5/327 (1%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
++R D YS LI GK+G A+ +M D +Y+ LI D
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+KA++ F ++K KP++V YN ++ +A+ + +L E+ E+ + PD
Sbjct: 61 SKAIS----IFSRLK-RAGIKPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTV 115
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+Y+ ++ Y +N E SV + M+ +C D+ T N++ID YG+ + +++F S+
Sbjct: 116 SYSTLLTMYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSM 175
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P + ++N+++ YG A L G+A ++F+ M + +TY ++ +YG
Sbjct: 176 RKVGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEH 235
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A + E+ G + T + ++ + G A +LF+ + GV D Y+ +
Sbjct: 236 EKANNLIQEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTM 295
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVP 463
AY +A + ++LL +++ +P
Sbjct: 296 IVAYERAGLVAHAKRLLHELKRPDNIP 322
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 109/217 (50%)
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
E L+PD YTY+ ++ +GK G+ + S L +M+ ++ D++ ++ LI+ K +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
K +F L + KP L +NSMI +GKA+L +A + +M P ++Y ++
Sbjct: 62 KAISIFSRLKRAGIKPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTLL 121
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
TMY A +F E+ ++ + ++T N M++ Y + EAD LF + +G+
Sbjct: 122 TMYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIE 181
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
P+ +Y L + Y A + L + M++ I N
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQN 218
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/350 (20%), Positives = 146/350 (41%), Gaps = 36/350 (10%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ +I V GK R A L SEMR +G PD Y+ L+T ++ + +A
Sbjct: 78 DLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTLLTMYVEN----QKFLEA 133
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L F +M+ + +C ++ T NI++ Q + + LF + + + P++ +YN ++
Sbjct: 134 LSVFAEMREI-KCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPNVVSYNTLLR 192
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
YG + E + M+ + +++T+N ++ YGK +K + + + + +P
Sbjct: 193 VYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNRGIEP 252
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T++++I +GK +A +FQK+ + + Y+ +I Y V+ A+ +
Sbjct: 253 NAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVAHAKRLL 312
Query: 384 DELSK-------------------------------LGKDMKVSTLNAMLEAYCMNGLPT 412
EL + G+ ++ M++ +
Sbjct: 313 HELKRPDNIPRDTAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIDLFSKYKKYP 372
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+FE +G DS+ L+ AY K + + + M+ G V
Sbjct: 373 NVVEVFEKMRGLGYFSDSNVISLVLNAYGKLHEFDKANDMYMGMQDEGCV 422
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 126/294 (42%), Gaps = 37/294 (12%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
++ K+L+ L VF M++ + + D + +I V G+ + A LF MR G P+
Sbjct: 126 ENQKFLEALSVFAEMREIKCLL-DLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPNV 184
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
YN L+ + A+ +A+ F+ M+ + + N+VTYN ++ + ++ N
Sbjct: 185 VSYNTLLRVY----GDAELFGEAIHLFRLMQRKD-IEQNVVTYNTMMMIYGKTLEHEKAN 239
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
L +E+H + P+ TY+ ++ +GK G + + +++S+ + D + + +I +Y
Sbjct: 240 NLIQEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAY 299
Query: 301 --------GKRQAFD--------------------KMEQ---VFKSLMHSKEKPTLPTFN 329
KR + ++E+ VF+ + + E + F
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFE 359
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
MI + K + VF+KM + Y ++ YG +A +++
Sbjct: 360 RMIDLFSKYKKYPNVVEVFEKMRGLGYFSDSNVISLVLNAYGKLHEFDKANDMY 413
>gi|410110073|gb|AFV61116.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
virgata]
Length = 424
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 141/308 (45%), Gaps = 7/308 (2%)
Query: 134 WMQK--QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
W+QK Q D +YS LI + K A+ +FS ++ SG PD YNA+I
Sbjct: 38 WLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVF- 96
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KAK +A +M+ PN +Y+ LL + + + ++F E+ E
Sbjct: 97 ---GKAKLFREARSLISEMR-TAGVMPNTASYSTLLTMYVENKKFLEALSVFSEMREIKC 152
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
D+ T N ++D YG+ GM KE + + M+ +P+++++N L+ YG + F +
Sbjct: 153 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 212
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+F+ + + T+NSM++ YGK KA + Q+M P+ ITY II+++G
Sbjct: 213 LFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWG 272
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ RA +F +L G ++ M AY GL A L + P +
Sbjct: 273 KVGKLDRAAMLFQKLRSSGVEIDQVLYQTMXVAYERAGLVAHAKRLLHELKSPDNIPRDT 332
Query: 432 TYKLLYKA 439
+L A
Sbjct: 333 AIHILAGA 340
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 138/295 (46%), Gaps = 5/295 (1%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
LF EMR PD Y+ LIT H K AL + QKM+ +R ++V Y+ L
Sbjct: 3 LFDEMRQRALSPDRYTYSTLIT-HF---GKEGLFDAALSWLQKME-QDRVPGDLVLYSNL 57
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+ + + + ++F L S PD+ YN +++ +GK + +E S++S M++
Sbjct: 58 IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGV 117
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
P+ +++ L+ Y + + F + VF + K L T N MI YG+ + +A+
Sbjct: 118 MPNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADK 177
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+F M M P+ ++Y ++ +YG + A +F + + V T N+M+ Y
Sbjct: 178 LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYG 237
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+A+ L + N G+ P+S TY + + K + L +++ +G+
Sbjct: 238 KTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 292
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 153/327 (46%), Gaps = 5/327 (1%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
+QR D YS LI GK+G A+ +M D +Y+ LI D
Sbjct: 8 RQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 67
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+KA++ F ++K P++V YN ++ +A+ + +L E+ + + P+
Sbjct: 68 SKAIS----IFSRLK-RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTA 122
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+Y+ ++ Y +N E SV S M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 123 SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 182
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P + ++N+++ YG A L G+A ++F+ M + +TY ++ +YG
Sbjct: 183 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEH 242
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A + E+ G + T + ++ + G A +LF+ + GV D Y+ +
Sbjct: 243 EKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTM 302
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVP 463
AY +A + ++LL ++ +P
Sbjct: 303 XVAYERAGLVAHAKRLLHELKSPDNIP 329
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 113/225 (50%)
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
+ LF E+ + L+PD YTY+ ++ +GK G+ S L +M+ ++ D++ ++ LI+
Sbjct: 1 HGLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIEL 60
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
K + K +F L S P L +N+MI +GKA+L +A + +M P+
Sbjct: 61 SRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPN 120
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
+Y ++TMY A +F E+ ++ + ++T N M++ Y G+ EAD LF
Sbjct: 121 TASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFW 180
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
MG+ P+ +Y L + Y A + L + M++ IV N
Sbjct: 181 GMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQN 225
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 142/340 (41%), Gaps = 42/340 (12%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L SEMR +G P+ + Y+ L+T ++
Sbjct: 78 KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMYVEN--- 134
Query: 197 AKALAKALGYFQKMK--------------------------------GMER--CKPNIVT 222
K +AL F +M+ GM + +PN+V+
Sbjct: 135 -KKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 193
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
YN LLR A + LF+ + + ++ TYN +M YGK ++ +++ M+
Sbjct: 194 YNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQEMQ 253
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
+ +P+ IT++ +I +GK D+ +F+ L S + + +M + Y +A L
Sbjct: 254 NRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMXVAYERAGLVA 313
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
A+ + ++ +P I + I + + A +F + G+ ++ M+
Sbjct: 314 HAKRLLHELK----SPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMI 369
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+ +F+ +G PDS+ L+ AY K
Sbjct: 370 HLFSKYKKYANVIEVFDKMRGLGYFPDSNVIALVLNAYGK 409
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 125/297 (42%), Gaps = 37/297 (12%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
++ K+L+ L VF M++ + + D + +I V G+ G + A LF MR G P+
Sbjct: 133 ENKKFLEALSVFSEMREIKC-LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 191
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
YN L+ + A+ +A+ F+ M+ + N+VTYN ++ + ++ N
Sbjct: 192 VSYNTLLRVY----GDAELFGEAIHLFRLMQ-RKNIVQNVVTYNSMMMIYGKTLEHEKAN 246
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
L +E+ + P+ TY+ ++ +GK G + + +++S+ + D + + + +Y
Sbjct: 247 NLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMXVAY 306
Query: 301 --------GKRQAFD--------------------KMEQ---VFKSLMHSKEKPTLPTFN 329
KR + ++E+ VF+ + + E + F
Sbjct: 307 ERAGLVAHAKRLLHELKSPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFE 366
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
MI + K + VF KM + Y P ++ YG +A ++ E+
Sbjct: 367 RMIHLFSKYKKYANVIEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANGVYMEM 423
>gi|255661212|gb|ACU25775.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 426
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 139/287 (48%), Gaps = 7/287 (2%)
Query: 130 EVFRWMQK--QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
+ W+QK Q D +YS LI + K A+ +FS ++ SG PD YN++I
Sbjct: 27 DALSWLQKMEQDRVPGDLVLYSNLIELSRKLYDYSKAISIFSRLKRSGIVPDLVAYNSMI 86
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
KAK +A +M+ M P+ V+Y+ LL + + + ++F E+
Sbjct: 87 NVF----GKAKLFREARSLISEMR-MVGVVPDTVSYSTLLTMYVENQKFLEALSVFAEMR 141
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
E D+ T N ++D YG+ M KE + + M+ +P+++++N L+ YG + F
Sbjct: 142 EIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKMGIEPNVVSYNTLLRVYGDAELFG 201
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
+ +F+ + + + T+N+M++ YGK KA + Q+M + P+ ITY II
Sbjct: 202 EAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHSRGIEPNAITYSTII 261
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+++G + RA +F +L G ++ M+ AY GL A
Sbjct: 262 SIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVAHA 308
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 150/316 (47%), Gaps = 5/316 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS LI GK+G A+ +M D +Y+ LI D +KA++ F
Sbjct: 12 YSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLYDYSKAIS----IF 67
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++K P++V YN ++ +A+ + +L E+ + PD +Y+ ++ Y +
Sbjct: 68 SRLK-RSGIVPDLVAYNSMINVFGKAKLFREARSLISEMRMVGVVPDTVSYSTLLTMYVE 126
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
N E SV + M+ +C D+ T N++ID YG+ + +++F S+ +P + +
Sbjct: 127 NQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKMGIEPNVVS 186
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N+++ YG A L G+A ++F+ M + +TY ++ +YG +A + E+
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMH 246
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G + T + ++ + G A +LF+ + GV D Y+ + AY +A +
Sbjct: 247 SRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVA 306
Query: 448 LVQKLLKRMEQNGIVP 463
++LL +++ +P
Sbjct: 307 HAKRLLHELKRPDNIP 322
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 153/329 (46%), Gaps = 11/329 (3%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L SEMR G PD Y+ L+T ++
Sbjct: 71 KRSGIVPDLVAYNSMINVFGKAKLFREARSLISEMRMVGVVPDTVSYSTLLTMYVEN--- 127
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+ +AL F +M+ + +C ++ T NI++ Q + + LF + + + P++
Sbjct: 128 -QKFLEALSVFAEMREI-KCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKMGIEPNVV 185
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+YN ++ YG + E + M+ + +++T+N ++ YGK +K + +
Sbjct: 186 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQE- 244
Query: 317 MHSKE-KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
MHS+ +P T++++I +GK +A +FQK+ + + Y+ +I Y
Sbjct: 245 MHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYERAGL 304
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
V+ A+ + EL + + + ++ + A G EA +F + + G D + ++
Sbjct: 305 VAHAKRLLHELKRPDNIPRDTAIHILAGA----GRIEEATWVFRQAIDAGEVKDITVFER 360
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ ++K V ++ ++M G P+
Sbjct: 361 MVDLFSKYKKYPNVVEVFEKMRGLGYFPD 389
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 108/217 (49%)
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
E L+P YTY+ ++ +GK G+ + S L +M+ ++ D++ ++ LI+ K +
Sbjct: 2 ERGLSPXRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLYDYS 61
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
K +F L S P L +NSMI +GKA+L +A + +M + P ++Y ++
Sbjct: 62 KAISIFSRLKRSGIVPDLVAYNSMINVFGKAKLFREARSLISEMRMVGVVPDTVSYSTLL 121
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
TMY A +F E+ ++ + ++T N M++ Y + EAD LF + MG+
Sbjct: 122 TMYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKMGIE 181
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
P+ +Y L + Y A + L + M++ I N
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 142/321 (44%), Gaps = 9/321 (2%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ DT YS L+ + + + A+ +F+EMR C D + N +I + D AK
Sbjct: 111 VPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQL-DMAKEAD 169
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
K +KM G+E PN+V+YN LLR A + LF+ + + ++ TYN +
Sbjct: 170 KLFWSMRKM-GIE---PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTM 225
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
M YGK ++ +++ M S +P+ IT++ +I +GK D+ +F+ L S
Sbjct: 226 MMIYGKTLEHEKANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGV 285
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
+ + +MI+ Y +A L A+ + ++ P I + I + + A
Sbjct: 286 EIDHVLYQTMIVAYERAGLVAHAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATW 341
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+F + G+ ++ M++ + +FE +G PDS+ L+ AY
Sbjct: 342 VFRQAIDAGEVKDITVFERMVDLFSKYKKYPNVVEVFEKMRGLGYFPDSNVIALVLNAYG 401
Query: 442 KANMKELVQKLLKRMEQNGIV 462
K + + + M+ G V
Sbjct: 402 KLHEFDKANDVYLEMQDEGCV 422
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 130/301 (43%), Gaps = 37/301 (12%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
++ K+L+ L VF M++ + + D + +I V G+ + A LF MR G P+
Sbjct: 126 ENQKFLEALSVFAEMREIKC-LLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKMGIEPNV 184
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
YN L+ + A+ +A+ F+ M+ + + N+VTYN ++ + ++ N
Sbjct: 185 VSYNTLLRVY----GDAELFGEAIHLFRLMQ-RKNIEQNVVTYNTMMMIYGKTLEHEKAN 239
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
L +E+H + P+ TY+ ++ +GK G + + +++S+ + D + + +I +Y
Sbjct: 240 NLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAY 299
Query: 301 --------GKRQAFD--------------------KMEQ---VFKSLMHSKEKPTLPTFN 329
KR + ++E+ VF+ + + E + F
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFE 359
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
M+ + K + VF+KM + Y P ++ YG +A +++ E+
Sbjct: 360 RMVDLFSKYKKYPNVVEVFEKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYLEMQDE 419
Query: 390 G 390
G
Sbjct: 420 G 420
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 118/293 (40%), Gaps = 40/293 (13%)
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
R G P Y+ LIT H K AL + QKM+ +R ++V Y+ L+
Sbjct: 1 RERGLSPXRYTYSTLIT-HF---GKEGLFDDALSWLQKME-QDRVPGDLVLYSNLIE--- 52
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
L+ +Y Y+ + S+ SR+K + PD++
Sbjct: 53 -------------------LSRKLYDYSKAI-------------SIFSRLKRSGIVPDLV 80
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
+N +I+ +GK + F + + + P ++++++ Y + + +A VF +M
Sbjct: 81 AYNSMINVFGKAKLFREARSLISEMRMVGVVPDTVSYSTLLTMYVENQKFLEALSVFAEM 140
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+K T +I +YG D A ++F + K+G + V + N +L Y L
Sbjct: 141 REIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKMGIEPNVVSYNTLLRVYGDAELF 200
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA LF + + TY + Y K E L++ M GI PN
Sbjct: 201 GEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHSRGIEPN 253
>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
Length = 447
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 161/358 (44%), Gaps = 43/358 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL------- 200
Y+ LI K GQ A+ +FS+M++SG P+ S N L+ + AL
Sbjct: 28 YNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQ 87
Query: 201 ---------------------AKALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVD 237
+A+ +F++MK G+E P++ +Y+ILL A + + +
Sbjct: 88 AGPFLPTSASHNILLRGFFMAGRAIEFFKEMKASGVE---PDLESYHILLSALSDSGRMA 144
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ +ALF + S PDI TYN +MD Y K G E +S++ + +P++ T++++I
Sbjct: 145 EAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIII 201
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+ Y K ++ +VF ++ S P TFN++I + KA + A +F +M +
Sbjct: 202 NCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCK 261
Query: 358 PSFITYECIITMYGYC---DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ +TY +I C V A ++F++L G + T N++++ + + +
Sbjct: 262 ATIVTYNTLID--SLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGF--SERANDG 317
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
L + H G PD TY L AN E Q+L M V F + L
Sbjct: 318 LRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGMACAPNVTTFNFLIRGL 375
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 155/342 (45%), Gaps = 29/342 (8%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
+E F+ M K D Y L++ + G+ A LFS M C PD YN L+
Sbjct: 112 IEFFKEM-KASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMD 167
Query: 189 AHLHTRD--KAKALAKAL---GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
+ +A++L K + GY +PN+ TY+I++ + V++ +F
Sbjct: 168 GYCKIGQTYEAQSLMKEILKAGY----------EPNVFTYSIIINCYCKLDKVEEAWEVF 217
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK- 302
++ ES P+ T+N ++ + K GM+++ + + M+ CK I+T+N LIDS K
Sbjct: 218 MKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKK 277
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
R +F L + PT+ T+NS+I + + G + M A P IT
Sbjct: 278 RGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERANDGLR--LLCHMHAEGCKPDVIT 335
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y C+I+ + V A+ +F+ ++ V+T N ++ C EA N
Sbjct: 336 YNCLISGLCSANRVEDAQRLFNGMACAPN---VTTFNFLIRGLCAQKKVEEA----RNIL 388
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ PD +T+ + A+ KA ++++K M ++G PN
Sbjct: 389 DRMTAPDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPN 430
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 153/330 (46%), Gaps = 20/330 (6%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L++FR MQ ++ + ++ L+ G+ A+ F EM+ SG PD Y+ L++
Sbjct: 80 LKLFREMQAGP-FLPTSASHNILLRGFFMAGR---AIEFFKEMKASGVEPDLESYHILLS 135
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
A D + +A+A F M C P+I+TYN+L+ + + +L KE+ +
Sbjct: 136 A---LSDSGR-MAEAHALFSAMT----CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILK 187
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
+ P+++TY+ +++ Y K ++E V +M + C P+ +TFN LI + K +
Sbjct: 188 AGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLED 247
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG--KAEYVFQKMTAMKYTPSFITYECI 366
++F + K T+ T+N++I + K R G A +F K+ TP+ +TY +
Sbjct: 248 AIKLFAEMEKIGCKATIVTYNTLIDSLCKKR-GGVYTAVDLFNKLEGAGLTPTIVTYNSL 306
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I G+ + + + + G V T N ++ C +A LF + M
Sbjct: 307 IQ--GFSERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLF---NGMAC 361
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
P+ +T+ L + E + +L RM
Sbjct: 362 APNVTTFNFLIRGLCAQKKVEEARNILDRM 391
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 110/249 (44%), Gaps = 13/249 (5%)
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
AR DQ LFKE+ + AP+ +TYN ++ + K G + + SV S MKS+ P+ T
Sbjct: 3 ARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAST 62
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
N L+ + +M K + P LPT S I + G+A F++M
Sbjct: 63 MNTLLLGLCE---IGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEMK 119
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
A P +Y +++ ++ A +F S + + T N +++ YC G
Sbjct: 120 ASGVEPDLESYHILLSALSDSGRMAEAHALF---SAMTCSPDIMTYNVLMDGYCKIGQTY 176
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
EA L + G P+ TY ++ Y K + E ++ +M ++ VPN
Sbjct: 177 EAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAV------ 230
Query: 473 ETFSSSLAG 481
TF++ +AG
Sbjct: 231 -TFNTLIAG 238
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 107/248 (43%), Gaps = 16/248 (6%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
PN TYN+L+R + + Q ++F ++ S L P+ T N ++ + G + +
Sbjct: 23 PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 82
Query: 278 LSRMKSNQCKPDIITFNLLIDSY---GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
M++ P + N+L+ + G+ F FK + S +P L +++ ++
Sbjct: 83 FREMQAGPFLPTSASHNILLRGFFMAGRAIEF------FKEMKASGVEPDLESYHILLSA 136
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKD 392
+ +A +F MT +P +TY + M GYC A+ + E+ K G +
Sbjct: 137 LSDSGRMAEAHALFSAMTC---SPDIMTYN--VLMDGYCKIGQTYEAQSLMKEILKAGYE 191
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
V T + ++ YC EA +F P++ T+ L + KA M E KL
Sbjct: 192 PNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKL 251
Query: 453 LKRMEQNG 460
ME+ G
Sbjct: 252 FAEMEKIG 259
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 14/130 (10%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
+ L M GC+PD YN LI+ A + A F M C PN+ T+
Sbjct: 317 GLRLLCHMHAEGCKPDVITYNCLISGLC----SANRVEDAQRLFNGMA----CAPNVTTF 368
Query: 224 NILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
N L+R CAQ + + N L + + APD+ T+N ++ A+ K G + + V+ M
Sbjct: 369 NFLIRGLCAQKKVEEARNIL-----DRMTAPDMTTFNTIILAFCKAGAMHDAREVMKDML 423
Query: 283 SNQCKPDIIT 292
+ P+ T
Sbjct: 424 KHGFYPNTYT 433
>gi|302806226|ref|XP_002984863.1| hypothetical protein SELMODRAFT_121207 [Selaginella moellendorffii]
gi|300147449|gb|EFJ14113.1| hypothetical protein SELMODRAFT_121207 [Selaginella moellendorffii]
Length = 564
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 132/305 (43%), Gaps = 5/305 (1%)
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
F W +KQ + D Y+ ++ ++G+ + L EM GC P+ YN LI
Sbjct: 54 FIWARKQAGFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLI---- 109
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
H +A L +L F M+ M C+P+ VTY L+ A+A D L++++ +
Sbjct: 110 HCYGRANDLDSSLKLFNVMQ-MVGCEPDRVTYCTLIDLQAKAGFHDAAMDLYRQMQHAGF 168
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
PD +TY+ ++ GK G + + M P ++T+N++ID + K FD +
Sbjct: 169 RPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALK 228
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
++ L P T+ ++ G AE VF++M + + ++ M+G
Sbjct: 229 LYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMWG 288
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
N +A + F+ + G V N++L AY + A + G+ P
Sbjct: 289 KTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGMAKWGLYPTLQ 348
Query: 432 TYKLL 436
TY L
Sbjct: 349 TYTSL 353
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 132/296 (44%), Gaps = 22/296 (7%)
Query: 94 EPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIA 153
EP V T N+ + HC+ G+++ L++F MQ D Y LI
Sbjct: 99 EPNVVTYNRLI------HCY------GRANDLDSSLKLFNVMQMVGCE-PDRVTYCTLID 145
Query: 154 VMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGM 213
+ K G AM L+ +M+++G RPD Y+ +I H KA L A F +M
Sbjct: 146 LQAKAGFHDAAMDLYRQMQHAGFRPDTFTYSIII----HCLGKAGKLNAAYKLFCEMTD- 200
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
P++VTYNI++ A+A D L+ +L E APD TY +M+ G G I++
Sbjct: 201 RGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIED 260
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
E V M+ D F L++D +GK +K Q F ++ S +P +P NS++
Sbjct: 261 AEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLS 320
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
Y ++ A V M P+ TY +++ C RA +D L L
Sbjct: 321 AYLRSSFYDAAGGVLGGMAKWGLYPTLQTYTSLLSSCAAC----RAAWEYDALFGL 372
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 128/289 (44%), Gaps = 5/289 (1%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
K ++ TY +L +A++ D +N L E+ P++ TYN ++ YG+ +
Sbjct: 64 KHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSSLK 123
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+ + M+ C+PD +T+ LID K D +++ + H+ +P T++ +I G
Sbjct: 124 LFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMDLYRQMQHAGFRPDTFTYSIIIHCLG 183
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
KA A +F +MT Y PS +TY II ++ A +++ +L ++G
Sbjct: 184 KAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRV 243
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
T ++E G +A+ +FE G D+ + L+ + K E + RM
Sbjct: 244 TYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKAAQWFNRM 303
Query: 457 EQNGIVPNK---RFFLEAL--ETFSSSLAGSQSGSAKTDLTRSLSTAKS 500
+G+ PN L A +F + G G AK L +L T S
Sbjct: 304 LDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGMAKWGLYPTLQTYTS 352
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 121/267 (45%), Gaps = 7/267 (2%)
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
E C+PN+VTYN L+ +A ++D LF + PD TY ++D K G
Sbjct: 96 EGCEPNVVTYNRLIHCYGRANDLDSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDA 155
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
+ +M+ +PD T++++I GK + ++F + P+L T+N +I
Sbjct: 156 AMDLYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIID 215
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
+ KA A ++ + + Y P +TY I+ + G C ++ A ++F+E+ + G
Sbjct: 216 LHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVA 275
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
M++ + G +A F + G+ P+ L AY +++ + +L
Sbjct: 276 DNPIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVL 335
Query: 454 KRMEQNGIVPNKRFFLEALETFSSSLA 480
M + G+ P L+T++S L+
Sbjct: 336 GGMAKWGLYPT-------LQTYTSLLS 355
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 102/228 (44%), Gaps = 6/228 (2%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
++++R MQ + DT YS +I +GK G+ A LF EM + G P YN +I
Sbjct: 157 MDLYRQMQHAG-FRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIID 215
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
H KA AL + ++ + P+ VTY I++ +++ +F+E+
Sbjct: 216 LHA----KAGKFDMALKLYSDLQEVGY-APDRVTYGIIMEVLGNCGHIEDAEQVFEEMER 270
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
+ D + ++D +GK G ++ +RM + +P++ N L+ +Y + +D
Sbjct: 271 AGWVADNPIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDA 330
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
V + PTL T+ S++ + R + + +F M +
Sbjct: 331 AGGVLGGMAKWGLYPTLQTYTSLLSSCAACRAAWEYDALFGLMGGTGH 378
>gi|255546465|ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546748|gb|EEF48246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 608
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 158/360 (43%), Gaps = 45/360 (12%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D+ +Y+ +I + G + AM +F +M+++GC+P S +N LI + + + L
Sbjct: 127 DSILYNAMINAFSESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNAGKPEEGLK-- 184
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ + + G KPN TYNIL+RA +N+++ + ++ S + PD+ TYN +
Sbjct: 185 MLHLMSLDG--SVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPDVVTYNILAR 242
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-- 321
AY + G E ++ M+ + P+ T ++++ Y K M + + + KE
Sbjct: 243 AYAQKGETLRAEDLILEMQYEKVAPNERTCGIIVNGYCKE---GNMIEALRFVYRMKELG 299
Query: 322 -KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P L FNS+I + + M P IT+ I+ + + + +
Sbjct: 300 VHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEYGVKPDVITFSTIMNAWSSAGLMDKCQ 359
Query: 381 EIFDELSKLGKDMKV--------------------STLNAM---------------LEAY 405
EIF++++K G + + S L +M + +
Sbjct: 360 EIFNDMAKAGIEPDIHAFSILAKGYVRAGETENAESVLTSMAKSGVRPNVVICTTIISGW 419
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
C G A +++E +G++P+ T++ L Y +A ++LL+ ME+ G+ P K
Sbjct: 420 CSAGKMENAKMVYEKMCEIGISPNLKTFETLIWGYAEARQPGKAEELLQLMEEKGVFPEK 479
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 148/321 (46%), Gaps = 12/321 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+A + K L S++ +G +PD +YNA+I A ++ + +A+ F
Sbjct: 96 YTTLVAALTKLKHFESIFLLISKVEENGMKPDSILYNAMINAF----SESGNVKEAMKIF 151
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH----ESILAPDIYTYNGVMD 263
QKMK CKP T+N L++ A ++ K LH + + P+ TYN ++
Sbjct: 152 QKMKDT-GCKPTTSTFNTLIKGYGNAGKPEEG---LKMLHLMSLDGSVKPNDRTYNILVR 207
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
A+ I+E +VL +M ++ +PD++T+N+L +Y ++ + E + + + K P
Sbjct: 208 AWCSKKNIEEAWNVLHKMVASGIQPDVVTYNILARAYAQKGETLRAEDLILEMQYEKVAP 267
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T ++ Y K +A +M + P+ + + +I + + E
Sbjct: 268 NERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNLVIFNSLIKGFLDITDTDGVDEAL 327
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ + G V T + ++ A+ GL + +F + G+ PD + +L K Y +A
Sbjct: 328 TLMEEYGVKPDVITFSTIMNAWSSAGLMDKCQEIFNDMAKAGIEPDIHAFSILAKGYVRA 387
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
E + +L M ++G+ PN
Sbjct: 388 GETENAESVLTSMAKSGVRPN 408
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 116/266 (43%), Gaps = 7/266 (2%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+P ++TY L+ A + ++ + + L ++ E+ + PD YN +++A+ ++G +KE
Sbjct: 90 RPTLITYTTLVAALTKLKHFESIFLLISKVEENGMKPDSILYNAMINAFSESGNVKEAMK 149
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL----MHSKEKPTLPTFNSMI 332
+ +MK CKP TFN LI YG K E+ K L + KP T+N ++
Sbjct: 150 IFQKMKDTGCKPTTSTFNTLIKGYGNA---GKPEEGLKMLHLMSLDGSVKPNDRTYNILV 206
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKD 392
+ + +A V KM A P +TY + Y RA ++ E+
Sbjct: 207 RAWCSKKNIEEAWNVLHKMVASGIQPDVVTYNILARAYAQKGETLRAEDLILEMQYEKVA 266
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
T ++ YC G EA +GV P+ + L K + + V +
Sbjct: 267 PNERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNLVIFNSLIKGFLDITDTDGVDEA 326
Query: 453 LKRMEQNGIVPNKRFFLEALETFSSS 478
L ME+ G+ P+ F + +SS+
Sbjct: 327 LTLMEEYGVKPDVITFSTIMNAWSSA 352
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 124/271 (45%), Gaps = 5/271 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ L +KG+T A L EM+ P+ ++ + K + +A
Sbjct: 233 DVVTYNILARAYAQKGETLRAEDLILEMQYEKVAPNERTCGIIVNGYC----KEGNMIEA 288
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L + +MK + PN+V +N L++ + D V+ + E + PD+ T++ +M+
Sbjct: 289 LRFVYRMKEL-GVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEYGVKPDVITFSTIMN 347
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
A+ G++ + + + + M +PDI F++L Y + + E V S+ S +P
Sbjct: 348 AWSSAGLMDKCQEIFNDMAKAGIEPDIHAFSILAKGYVRAGETENAESVLTSMAKSGVRP 407
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ ++I + A A+ V++KM + +P+ T+E +I Y +A E+
Sbjct: 408 NVVICTTIISGWCSAGKMENAKMVYEKMCEIGISPNLKTFETLIWGYAEARQPGKAEELL 467
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ + G + ST+ + +A+ GL EA
Sbjct: 468 QLMEEKGVFPEKSTIQLVADAWRNIGLLCEA 498
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 115/247 (46%), Gaps = 17/247 (6%)
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV---LSRMKSNQCKPDIITFN 294
+ N +F L E P + TY ++ A K +K ES+ +S+++ N KPD I +N
Sbjct: 76 EANLIFDNLVEDGHRPTLITYTTLVAALTK---LKHFESIFLLISKVEENGMKPDSILYN 132
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+I+++ + + ++F+ + + KPT TFN++I YG A GK E + + M
Sbjct: 133 AMINAFSESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNA---GKPEEGLKMLHLM 189
Query: 355 KYT----PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
P+ TY ++ + N+ A + ++ G V T N + AY G
Sbjct: 190 SLDGSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPDVVTYNILARAYAQKGE 249
Query: 411 PTEA-DLLFENSHNMGVTPDSSTYKLLYKAYTK-ANMKELVQKLLKRMEQNGIVPNKRFF 468
A DL+ E + V P+ T ++ Y K NM E + + + RM++ G+ PN F
Sbjct: 250 TLRAEDLILEMQYEK-VAPNERTCGIIVNGYCKEGNMIEAL-RFVYRMKELGVHPNLVIF 307
Query: 469 LEALETF 475
++ F
Sbjct: 308 NSLIKGF 314
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 92/216 (42%), Gaps = 7/216 (3%)
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
+++ +M+ G E + + + +P +IT+ L+ + K + F+ + +
Sbjct: 58 VHSRTKLMNILIGKGKPHEANLIFDNLVEDGHRPTLITYTTLVAALTKLKHFESIFLLIS 117
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
+ + KP +N+MI + ++ +A +FQKM P+ T+ +I YG
Sbjct: 118 KVEENGMKPDSILYNAMINAFSESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIKGYG--- 174
Query: 375 NVSRAREIFDELSKLGKDMKVS----TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
N + E L + D V T N ++ A+C EA + G+ PD
Sbjct: 175 NAGKPEEGLKMLHLMSLDGSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPDV 234
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
TY +L +AY + + L+ M+ + PN+R
Sbjct: 235 VTYNILARAYAQKGETLRAEDLILEMQYEKVAPNER 270
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%)
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G P EA+L+F+N G P TY L A TK E + L+ ++E+NG+ P+ +
Sbjct: 72 GKPHEANLIFDNLVEDGHRPTLITYTTLVAALTKLKHFESIFLLISKVEENGMKPDSILY 131
Query: 469 LEALETFSSS 478
+ FS S
Sbjct: 132 NAMINAFSES 141
>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
Length = 547
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 176/384 (45%), Gaps = 43/384 (11%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L +S + L++F M Q Y+ + G +S + G A L ++ GC
Sbjct: 118 LCRSGRHRDALKLFDQMMDQSGYLPEAGFFSFVAGSCTNAGLLDAASTLLTKGSRLGCCI 177
Query: 179 DPSVYNAL---ITAHLHTRDKAKALAKA-----------------------LGYFQK-MK 211
+P YN L + AH +D A AL ++ +G FQK ++
Sbjct: 178 EPYAYNYLLNSLIAHGRAQD-AVALFESWIQDGLYSPDVWSFNVVIKGVCRMGNFQKALE 236
Query: 212 GMER-----CKPNIVTYNILLRACAQARNVDQVNALFKELH-ESILAPDIYTYNGVMDAY 265
+ER C P+ +T+NIL+ +A+ V++ + + + L + + P+ TY V+ Y
Sbjct: 237 LVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYTSVISGY 296
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G +++ SV + M + +P+ +T+N+LI+ YGK + ++++ L+ P +
Sbjct: 297 CKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDV 356
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
TF+S+I Y + A+ ++++M P+ T+ II + C +R+ E D
Sbjct: 357 VTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIII--HSLCKQ-NRSAEALDI 413
Query: 386 LSKLG--KDMKVSTL--NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
L +L D+ T N +++ C G EA+L+ + G PD TY +L +
Sbjct: 414 LRELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHC 473
Query: 442 -KANMKELVQKLLKRMEQNGIVPN 464
K + E + L +M + G P+
Sbjct: 474 MKGRIPEAI-TLFHKMVEAGCRPD 496
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 144/333 (43%), Gaps = 6/333 (1%)
Query: 134 WMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT 193
W+Q Y D ++ +I + + G + A+ L M GC PD +N L+
Sbjct: 205 WIQDG-LYSPDVWSFNVVIKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLC-- 261
Query: 194 RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP 253
+AK + K ++++ C PN VTY ++ +A ++ +++ ++ ES P
Sbjct: 262 --RAKQVNKGHEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRP 319
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
+ TYN +++ YGK ++ + ++ C PD++TF+ LID Y + D ++++
Sbjct: 320 NTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIW 379
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA-MKYTPSFITYECIITMYGY 372
K + +P + TF+ +I + K +A + +++ P Y +I +
Sbjct: 380 KEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMRTDIAPQTFIYNPVIDILCK 439
Query: 373 CDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
V A I ++ + G T ++ +CM G EA LF G PD+ T
Sbjct: 440 GGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVEAGCRPDNIT 499
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
KA M V +++ +G+ K
Sbjct: 500 VNSFVSCVLKAGMPNEVDQIMLIASGHGLASQK 532
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 153/350 (43%), Gaps = 13/350 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRN-SGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
Y +IA + + G+ R A+ LF +M + SG P+ ++ + + A L A
Sbjct: 111 YIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFSFVAG----SCTNAGLLDAASTL 166
Query: 207 FQKMKGMERC-KPNIVTYNILLRA-CAQARNVDQVNALFKE-LHESILAPDIYTYNGVMD 263
K + C +P YN LL + A R D V ALF+ + + + +PD++++N V+
Sbjct: 167 LTKGSRLGCCIEP--YAYNYLLNSLIAHGRAQDAV-ALFESWIQDGLYSPDVWSFNVVIK 223
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-K 322
+ G ++ ++ RM C PD IT N+L+D + + +K +V + L
Sbjct: 224 GVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCM 283
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P T+ S+I Y KA A V+ M P+ +TY +I YG ++ A +
Sbjct: 284 PNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRM 343
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+ +L V T +++++ YC G +A +++ + P+ T+ ++ + K
Sbjct: 344 YRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCK 403
Query: 443 ANMKELVQKLLKRME-QNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDL 491
N +L+ + + I P + ++ ++ TD+
Sbjct: 404 QNRSAEALDILRELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDM 453
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 117/265 (44%), Gaps = 31/265 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L ++ + + EV R +Q+ + + Y+ +I+ K G+ AM ++++M
Sbjct: 255 ILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLE 314
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKAL------------AKALGYFQKMKGMERC----- 216
SG RP+ YN LI + D A+ + + + G RC
Sbjct: 315 SGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDD 374
Query: 217 -------------KPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
+PN+ T++I++ + C Q R+ + ++ L + + +AP + YN V+
Sbjct: 375 AKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMRTDIAPQTFIYNPVI 434
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D K G + E +++ MK C PD T+ +LI + + + +F ++ + +
Sbjct: 435 DILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVEAGCR 494
Query: 323 PTLPTFNSMIINYGKARLQGKAEYV 347
P T NS + KA + + + +
Sbjct: 495 PDNITVNSFVSCVLKAGMPNEVDQI 519
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 167/378 (44%), Gaps = 10/378 (2%)
Query: 105 KVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLA 164
KV +E C + E + + +VF MQKQ + G ++ + +G +G R A
Sbjct: 97 KVHTTESCNYMLELMRAHGRVGDMAQVFDLMQKQ-VVKTNVGTFATIFGGVGVEGGLRSA 155
Query: 165 MWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYN 224
MR +G + YN LI + K+ A+A+ ++ M + P++ TY+
Sbjct: 156 PVALPVMREAGMSLNAYTYNGLI----YFLVKSGFDAEAMEVYKAMV-EDGISPSVRTYS 210
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
+L+ A + R+VD V L E+ + P++Y+Y + G+ E +L +M+ +
Sbjct: 211 VLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDS 270
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
CKPD++T ++I + VF + S +KP T+ +++ G +
Sbjct: 271 GCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSV 330
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
V+ M A Y + ++Y ++ V A +FDE+ + G + + N+++
Sbjct: 331 VEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISG 390
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ + A LF + + G +P+ T+ L Y K+ + + M+ GIVP+
Sbjct: 391 FLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPD 450
Query: 465 KRFFLEALETFSSSLAGS 482
+ A SLAGS
Sbjct: 451 ----VAAANAVLYSLAGS 464
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 154/337 (45%), Gaps = 5/337 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS L+ GKK +WL +EM G +P+ Y T + +A +A
Sbjct: 209 YSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSY----TICIRVLGQAARFDEAYHIL 264
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
KM+ CKP++VT+ ++++ A + A+F ++ S PD TY ++D G
Sbjct: 265 GKMED-SGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGD 323
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+G + + V + M ++ +I+++ ++D+ + D+ VF + P +
Sbjct: 324 SGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYS 383
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+NS+I + KA + +A +F M A +P+ T+ I YG +A + ++ +
Sbjct: 384 YNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMK 443
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G V+ NA+L + +G A +F MGV+PD+ TY ++ K +KA+ +
Sbjct: 444 SKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKAD 503
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQS 484
M ++G VP+ ++T G+++
Sbjct: 504 EAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEA 540
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 151/366 (41%), Gaps = 44/366 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ I V+G+ + A + +M +SGC+PD + +I A L+ A F
Sbjct: 244 YTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVII----QVLCDAGRLSDAKAVF 299
Query: 208 QKMKG-------------MERC---------------------KPNIVTYNILLRACAQA 233
KMK +++C NIV+Y ++ A Q
Sbjct: 300 WKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQV 359
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
VD+ A+F E+ E ++P+ Y+YN ++ + K M + + M + P+ T
Sbjct: 360 GRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTH 419
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
L I+ YGK K Q ++ + P + N+++ + + G A+ VF ++ A
Sbjct: 420 VLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKA 479
Query: 354 MKYTPSFITYECIITMYGYCDNVSRARE---IFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M +P ITY +I C S+A E F ++ + G V LN++++ G
Sbjct: 480 MGVSPDTITYTMMIKC---CSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGK 536
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
EA LF M + P + TY L + + V +LL+ M + PN +
Sbjct: 537 GNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNT 596
Query: 471 ALETFS 476
L+ S
Sbjct: 597 VLDCLS 602
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 162/378 (42%), Gaps = 29/378 (7%)
Query: 95 PLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAV 154
PL+R L K+ K + + F F+ LG S K TG Y+ LI
Sbjct: 736 PLIRHLCKHKKALEAHQLFNKFKGLGVSLK--------------------TGSYNSLIRG 775
Query: 155 MGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KG 212
+ + +A LF+EM+ GC PD YN ++ A K+ + + L ++M KG
Sbjct: 776 LVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDA----MGKSMRVEEMLKVQKEMHRKG 831
Query: 213 MERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIK 272
E VTYN ++ +++ ++Q L+ L +P TY ++D K+G +
Sbjct: 832 YES---TYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMV 888
Query: 273 EMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
+ E++ + M C+P+ +N+L++ + + + Q+F+ ++ P + ++ +I
Sbjct: 889 DAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILI 948
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKD 392
A F+++ + P I Y +I G + + A +F+E+ K G
Sbjct: 949 DTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGII 1008
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
+ T N+++ G EA ++E G P TY L + Y+ + +
Sbjct: 1009 PNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAA 1068
Query: 453 LKRMEQNGIVPNKRFFLE 470
+M G PN +++
Sbjct: 1069 YGQMIVGGCQPNSSTYMQ 1086
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 167/397 (42%), Gaps = 47/397 (11%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L ++ G S +EV+ M Y + Y+ ++ + + G+ A+ +F EM+
Sbjct: 317 LLDKCGDSGDSQSVVEVWNAMVAD-GYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEK 375
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYF--------------------------Q 208
G P+ YN+LI+ L KA +AL F Q
Sbjct: 376 GMSPEQYSYNSLISGFL----KADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQ 431
Query: 209 KMKGMERCK--------PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+K ++R + P++ N +L + A + + +F EL ++PD TY
Sbjct: 432 SLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTM 491
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ K E + S M + C PD++ N LID+ K ++ Q+F L K
Sbjct: 492 MIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMK 551
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQ---KMTAMKYTPSFITYECIITMYGYCDNVS 377
+PT T+N+++ G+ +GK + V Q +MT Y P+ ITY ++ V+
Sbjct: 552 IEPTNGTYNTLLSGLGR---EGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVN 608
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
A ++ +++ G +S+ N ++ EA +F + + PD +T +
Sbjct: 609 CAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKI-LAPDYATLCTIL 667
Query: 438 KAYTKAN-MKELVQKLLKRMEQNGIVPNKRFFLEALE 473
++ K MKE + + + + + G +K F +E
Sbjct: 668 PSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLME 704
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 141/360 (39%), Gaps = 60/360 (16%)
Query: 130 EVFR-WMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSE-MRNSGCRPDPSVYNALI 187
E FR + Q ++ D ++ K G + A+ E + +GC D S +++L+
Sbjct: 644 EAFRMFCQMKKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLM 703
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL---------RACAQARNVDQ 238
L K + K++ + + NI + ILL R + + +
Sbjct: 704 EGIL----KKAGVEKSIEFAE----------NIASRGILLNDFFLCPLIRHLCKHKKALE 749
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+ LF + ++ +YN ++ +I E + + MK C PD T+NL++D
Sbjct: 750 AHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILD 809
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
+ GK ++M +V K MH K Y
Sbjct: 810 AMGKSMRVEEMLKVQKE-MHRK----------------------------------GYES 834
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+++TY II+ + +A +++ L G T +L+ +G +A+ LF
Sbjct: 835 TYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLF 894
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
G P+ + Y +L + A E V +L ++M + GI P+ + + ++T ++
Sbjct: 895 NEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTA 954
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 153/350 (43%), Gaps = 10/350 (2%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
F + K +K +Q +E+ K D Y+ +I+ K + A + M+ G
Sbjct: 122 FFNMKKIEKAIQVMEILEKHGK-----PDVFAYNAVISGFCKADRVDHASKVLDRMKKRG 176
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
PD YN LI + R + + + K + CKP ++TY IL+ A
Sbjct: 177 FEPDVVTYNILI-GNFCGRGRLDLALRVMDQLLK----DNCKPTVITYTILIEATITQGG 231
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
+D+ L E+ L PD YTYN V++ K GM+ LSR+ N C + T+N+
Sbjct: 232 IDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNI 291
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
L+ ++ E++ ++ +P T++++I + +A+ V + M
Sbjct: 292 LLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKA 351
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
P +Y+ +I+ V A E D++ G + + N++L + C NG EA
Sbjct: 352 LAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEAL 411
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+FE +G P++ +Y L+ A + K ++ M NGI P++
Sbjct: 412 NIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDE 461
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 133/319 (41%), Gaps = 6/319 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI +G AM L EM + G RPD YN ++ K L +A +
Sbjct: 219 YTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMC----KEGMLDRAFEFL 274
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++ C + TYNILLR + L ++ P+ TY+ ++ A +
Sbjct: 275 SRISK-NGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCR 333
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+G I E ++VL MK PD +++ LI + + D + ++ P + +
Sbjct: 334 DGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILS 393
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+NS++ + K +A +F+K+ + P+ +Y + + RA + E+
Sbjct: 394 YNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEML 453
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEA-DLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
G D T N+++ C +GL +A +LL + + P +Y + K
Sbjct: 454 SNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRI 513
Query: 447 ELVQKLLKRMEQNGIVPNK 465
++L M G +PN+
Sbjct: 514 IDAIEVLAAMVNEGCLPNE 532
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 111/262 (42%), Gaps = 31/262 (11%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKA 199
+A Y+ L+ + +G+ L S+M GC P+P Y+ LITA D+AK
Sbjct: 283 VAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKN 342
Query: 200 LAKAL--------GYFQKMKGMERCK--------------------PNIVTYNILLRACA 231
+ K + GY C+ P+I++YN +L +
Sbjct: 343 VLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLC 402
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ N D+ +F++L E P+ +YN + A +G ++ M SN PD I
Sbjct: 403 KNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEI 462
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-KPTLPTFNSMIINYGKARLQGKAEYVFQK 350
T+N LI + D+ ++ + S++ +PT+ ++N++++ K + A V
Sbjct: 463 TYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAA 522
Query: 351 MTAMKYTPSFITYECIITMYGY 372
M P+ TY +I G+
Sbjct: 523 MVNEGCLPNETTYTLLIQGIGF 544
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 7/172 (4%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
++ D Y+ ++A + K G A+ +F ++ GC P+ YN L A + DK +AL
Sbjct: 387 HLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRAL 446
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES-ILAPDIYTYN 259
L G++ P+ +TYN L+ + VDQ L ++ ES P + +YN
Sbjct: 447 GMILEMLSN--GID---PDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYN 501
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG-KRQAFDKME 310
V+ K I + VL+ M + C P+ T+ LLI G +D ME
Sbjct: 502 TVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAME 553
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 155/353 (43%), Gaps = 13/353 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + L K+ + L+ +VF +R +I D Y+ +I + K G+ F EMRN
Sbjct: 192 LIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNR 251
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G PD Y ALI + KAK + KA +++M + VTYNI+L +A
Sbjct: 252 GYEPDAVTYAALIDGFM----KAKMIPKAHRVYRQML-QSGTVVSTVTYNIILDGLCKAG 306
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
V + A F + E + TY+ +MD + G + + RM C+P+++++N
Sbjct: 307 RVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYN 366
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV--FQKMT 352
++I + K F+ L+ + P + TFN+ + + RL ++ V F+ M
Sbjct: 367 IIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQ-RLDTVSDGVELFESMV 425
Query: 353 AMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
+ +P+ +Y I M G C + A EIF E+ G V N ++ C+ G
Sbjct: 426 SQGTSPNLHSYS--ILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGR 483
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
EA +F PD+ +Y L ++ E + L M+ G P
Sbjct: 484 VDEALEVFRELERRS-APDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAP 535
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 152/363 (41%), Gaps = 48/363 (13%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALG 205
Y+ +I + K G+ A +F +M +GCRPD VY ALI + ++A AL K
Sbjct: 115 YTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEA- 173
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK-ELHESILAPDIYTYNGVMDA 264
K P++VTY L+ +A + + +F E E PD TY ++D
Sbjct: 174 --NARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDG 231
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
K G ++E M++ +PD +T+ LID + K + K +V++ ++ S +
Sbjct: 232 LCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVS 291
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREI 382
T+N ++ KA +A F M + +TY + M G+C NVS A E+
Sbjct: 292 TVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSAL--MDGFCSEGNVSAAVEL 349
Query: 383 FDE-------------------LSKLGKDMK----------------VSTLNAMLEAYCM 407
F L + GK K V T NA L C
Sbjct: 350 FRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQ 409
Query: 408 NGLPTEAD--LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
L T +D LFE+ + G +P+ +Y +L +A E+ ++ + M G+ P+
Sbjct: 410 R-LDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDV 468
Query: 466 RFF 468
F
Sbjct: 469 VVF 471
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 137/338 (40%), Gaps = 59/338 (17%)
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME--RCKPNIVTYNILLRACA 231
+GC PD YN I KA+ + A FQ +K M+ +C P VTY L+
Sbjct: 36 AGCEPDYVTYNVFIDGLC----KAERVDDA---FQLLKKMDEKKCLPTTVTYTALVDGLL 88
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+A +D+ A+ +++ E +P + TY V+D K G ++E + M N C+PD
Sbjct: 89 KAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAF 148
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSL----MHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
+ LI K ++ ++K H+ P + T+ S+I KA +A V
Sbjct: 149 VYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQV 208
Query: 348 FQKMTAMK-YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
F + + P +TY II D L KLG+ +E C
Sbjct: 209 FDDEAVERGFIPDAVTYTSII----------------DGLCKLGR----------VEEGC 242
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK- 465
F N G PD+ TY L + KA M ++ ++M Q+G V +
Sbjct: 243 ER---------FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTV 293
Query: 466 --RFFLEAL-------ETFSSSLAGSQSGSAKTDLTRS 494
L+ L E +++ LA + G T +T S
Sbjct: 294 TYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYS 331
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 5/218 (2%)
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
+PD+ + V++ + + E SVL R C+PD +T+N+ ID K + D Q
Sbjct: 4 SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+ K + K PT T+ +++ KA +A V ++M +P+ TY +I
Sbjct: 64 LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS----HNMGVT 427
V AR IF ++ G A+++ C +G P EA L++ + H+
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183
Query: 428 PDSSTYKLLYKAYTKAN-MKELVQKLLKRMEQNGIVPN 464
PD TY L KA + E Q + G +P+
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPD 221
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 7/204 (3%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ + L K+ + + F M+ +R +A YS L+ +G A+ LF M +
Sbjct: 297 IILDGLCKAGRVAEAYATFLAME-ERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLD 355
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQ 232
GC P+ YN +I +A LAKA YF+K+ C P++ T+N L C +
Sbjct: 356 RGCEPNLVSYNIIIRGLC----RAGKLAKAYFYFEKLLQRRLC-PDVYTFNAFLHGLCQR 410
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
V LF+ + +P++++Y+ +MD + G ++ + M S PD++
Sbjct: 411 LDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVV 470
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSL 316
FN LI D+ +VF+ L
Sbjct: 471 FNTLIRWLCIAGRVDEALEVFREL 494
>gi|403366299|gb|EJY82949.1| hypothetical protein OXYTRI_19434 [Oxytricha trifallax]
Length = 1420
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 164/344 (47%), Gaps = 24/344 (6%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTR----------LAMWLFSEMR--NSGCRPDPSVYN 184
+Q + D YS LI + + Q++ A L +M+ N G +PD +YN
Sbjct: 646 QQNNIVPDNFTYSTLIKGIRAENQSQNGISNPMDLEKAFALLEQMKQSNGGVKPDEILYN 705
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
LI A + D +A+A FQ+M+ KP+ VTY IL++A A +D +FK
Sbjct: 706 CLIDACVRFHDVNRAVA----VFQEMQ-FSNIKPSSVTYGILIKAYGSANQLDNAFFVFK 760
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
++ ++ L P+ TY ++DA KN I+ V MK + + + I F LI + K
Sbjct: 761 KMKDNCLIPNSVTYGCLIDACVKNNQIERAMEVFETMKRDGVQLNTIIFTTLIKGFAKSF 820
Query: 305 AFDKMEQVFKSL-MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM-TAMKYT-PSFI 361
D+ +V++ + M K KP TFNS+I + KA +F++M + +T P I
Sbjct: 821 KLDQALEVYQIMKMDDKIKPNNVTFNSLIDCCIRCNSIKKAMEIFEEMKQPISHTKPDLI 880
Query: 362 TYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
TY +I G+C N+ +A + +++ K N++L+ C A +++
Sbjct: 881 TYSTMIK--GFCREKNIQQALIMLNDMEKNNIMADEVLYNSLLDGCCKANEIEMALKVYK 938
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
N + + P + TY +L K Y K +L+ M+++GI P
Sbjct: 939 NMEILKIKPSNVTYSILIKIYGKQRNLPKALGVLEEMKKDGIRP 982
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 170/378 (44%), Gaps = 22/378 (5%)
Query: 106 VVRSEHCFLLFEELG--------KSDKWLQ-CLEVFRWMQKQRWYIADTGIYSKLIAVMG 156
V S H F+ +E+ +K LQ E+F M+ Q D Y+ LI
Sbjct: 572 VNSSNHHFMRPDEISFNTIIKGCAQEKKLQLAFEMFNLMKMQCLKPNDV-TYNSLIDACV 630
Query: 157 KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK-------ALAKALGYFQK 209
+ + A L SEM+ + PD Y+ LI + ++++ L KA ++
Sbjct: 631 RCNRLNSAWQLLSEMQQNNIVPDNFTYSTLIKG-IRAENQSQNGISNPMDLEKAFALLEQ 689
Query: 210 MKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
MK KP+ + YN L+ AC + +V++ A+F+E+ S + P TY ++ AYG
Sbjct: 690 MKQSNGGVKPDEILYNCLIDACVRFHDVNRAVAVFQEMQFSNIKPSSVTYGILIKAYGSA 749
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
+ V +MK N P+ +T+ LID+ K ++ +VF+++ + F
Sbjct: 750 NQLDNAFFVFKKMKDNCLIPNSVTYGCLIDACVKNNQIERAMEVFETMKRDGVQLNTIIF 809
Query: 329 NSMIINYGKARLQGKAEYVFQKMT-AMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
++I + K+ +A V+Q M K P+ +T+ +I C+++ +A EIF+E+
Sbjct: 810 TTLIKGFAKSFKLDQALEVYQIMKMDDKIKPNNVTFNSLIDCCIRCNSIKKAMEIFEEMK 869
Query: 388 KLGKDMK--VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ K + T + M++ +C +A ++ + + D Y L KAN
Sbjct: 870 QPISHTKPDLITYSTMIKGFCREKNIQQALIMLNDMEKNNIMADEVLYNSLLDGCCKANE 929
Query: 446 KELVQKLLKRMEQNGIVP 463
E+ K+ K ME I P
Sbjct: 930 IEMALKVYKNMEILKIKP 947
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 133/279 (47%), Gaps = 7/279 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + G +++ VF+ M K I ++ Y LI K Q AM +F M+
Sbjct: 741 ILIKAYGSANQLDNAFFVFKKM-KDNCLIPNSVTYGCLIDACVKNNQIERAMEVFETMKR 799
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G + + ++ LI K+ L +AL +Q MK ++ KPN VT+N L+ C +
Sbjct: 800 DGVQLNTIIFTTLIKGFA----KSFKLDQALEVYQIMKMDDKIKPNNVTFNSLIDCCIRC 855
Query: 234 RNVDQVNALFKELHESI--LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
++ + +F+E+ + I PD+ TY+ ++ + + I++ +L+ M+ N D +
Sbjct: 856 NSIKKAMEIFEEMKQPISHTKPDLITYSTMIKGFCREKNIQQALIMLNDMEKNNIMADEV 915
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
+N L+D K + +V+K++ K KP+ T++ +I YGK R KA V ++M
Sbjct: 916 LYNSLLDGCCKANEIEMALKVYKNMEILKIKPSNVTYSILIKIYGKQRNLPKALGVLEEM 975
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
P I Y C++ + A ++F ++ G
Sbjct: 976 KKDGIRPGLIVYTCLLQTCIKSRQLKTAEQLFHDMRIQG 1014
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 125/256 (48%), Gaps = 7/256 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMR-N 173
L + K+++ + +EVF M++ + +T I++ LI K + A+ ++ M+ +
Sbjct: 777 LIDACVKNNQIERAMEVFETMKRDGVQL-NTIIFTTLIKGFAKSFKLDQALEVYQIMKMD 835
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKG-MERCKPNIVTYNILLRACAQ 232
+P+ +N+LI + + ++ KA+ F++MK + KP+++TY+ +++ +
Sbjct: 836 DKIKPNNVTFNSLIDCCI----RCNSIKKAMEIFEEMKQPISHTKPDLITYSTMIKGFCR 891
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+N+ Q + ++ ++ + D YN ++D K I+ V M+ + KP +T
Sbjct: 892 EKNIQQALIMLNDMEKNNIMADEVLYNSLLDGCCKANEIEMALKVYKNMEILKIKPSNVT 951
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+++LI YGK++ K V + + +P L + ++ K+R AE +F M
Sbjct: 952 YSILIKIYGKQRNLPKALGVLEEMKKDGIRPGLIVYTCLLQTCIKSRQLKTAEQLFHDMR 1011
Query: 353 AMKYTPSFITYECIIT 368
+TY+ +I
Sbjct: 1012 IQGIRGDQLTYQTMIN 1027
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 147/391 (37%), Gaps = 95/391 (24%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ + S M+ G +PD +YN++I K +AKA + +M G E P +T+
Sbjct: 385 ALNVLSIMKERGIKPDEVLYNSIIDG----CSKNNQIAKAFLLYDEMLG-EGVTPTTITF 439
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL----S 279
N L+ C ++ N DQ + +++ E + PD YTY+ + +++E
Sbjct: 440 NSLIDCCVRSGNQDQAWRVLEQMKEKQVKPDNYTYSTLFKGIKSENQRQDLEKAFVLYNQ 499
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM---------------------- 317
SN PD I FN+L+D+ + D+ ++FK L
Sbjct: 500 LQNSNDFTPDEILFNVLLDACINCKQLDRAVELFKQLKPQSQPQIQVSNTDDADNSLSLE 559
Query: 318 -----------------HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
H +P +FN++I + + A +F M P+
Sbjct: 560 DSPDSAKNAPAVVNSSNHHFMRPDEISFNTIIKGCAQEKKLQLAFEMFNLMKMQCLKPND 619
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSK---LGKDMKVSTL--NAMLEAYCMNGLPTEAD 415
+TY +I C+ ++ A ++ E+ + + + STL E NG+ D
Sbjct: 620 VTYNSLIDACVRCNRLNSAWQLLSEMQQNNIVPDNFTYSTLIKGIRAENQSQNGISNPMD 679
Query: 416 L-----LFEN--SHNMGVTPD-----------------------------------SSTY 433
L L E N GV PD S TY
Sbjct: 680 LEKAFALLEQMKQSNGGVKPDEILYNCLIDACVRFHDVNRAVAVFQEMQFSNIKPSSVTY 739
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+L KAY AN + + K+M+ N ++PN
Sbjct: 740 GILIKAYGSANQLDNAFFVFKKMKDNCLIPN 770
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/375 (20%), Positives = 147/375 (39%), Gaps = 97/375 (25%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTR---LAMWLFSEMRNSG- 175
G D+ + LE K++ D YS L + + Q + A L+++++NS
Sbjct: 450 GNQDQAWRVLEQM----KEKQVKPDNYTYSTLFKGIKSENQRQDLEKAFVLYNQLQNSND 505
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-------------------- 215
PD ++N L+ A ++ K L +A+ F+++K +
Sbjct: 506 FTPDEILFNVLLDACIN----CKQLDRAVELFKQLKPQSQPQIQVSNTDDADNSLSLEDS 561
Query: 216 ------------------CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+P+ +++N +++ CAQ + + +F + L P+ T
Sbjct: 562 PDSAKNAPAVVNSSNHHFMRPDEISFNTIIKGCAQEKKLQLAFEMFNLMKMQCLKPNDVT 621
Query: 258 YNGVMDA----------------------------------------YGKNGMIKEME-- 275
YN ++DA +NG+ M+
Sbjct: 622 YNSLIDACVRCNRLNSAWQLLSEMQQNNIVPDNFTYSTLIKGIRAENQSQNGISNPMDLE 681
Query: 276 ---SVLSRMKSNQ--CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
++L +MK + KPD I +N LID+ + ++ VF+ + S KP+ T+
Sbjct: 682 KAFALLEQMKQSNGGVKPDEILYNCLIDACVRFHDVNRAVAVFQEMQFSNIKPSSVTYGI 741
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
+I YG A A +VF+KM P+ +TY C+I + + RA E+F+ + + G
Sbjct: 742 LIKAYGSANQLDNAFFVFKKMKDNCLIPNSVTYGCLIDACVKNNQIERAMEVFETMKRDG 801
Query: 391 KDMKVSTLNAMLEAY 405
+ +++ +
Sbjct: 802 VQLNTIIFTTLIKGF 816
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/392 (19%), Positives = 154/392 (39%), Gaps = 54/392 (13%)
Query: 145 TGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKAL 204
T ++ LI + G A + +M+ +PD Y+ L + + ++ + L KA
Sbjct: 436 TITFNSLIDCCVRSGNQDQAWRVLEQMKEKQVKPDNYTYSTLFKG-IKSENQRQDLEKAF 494
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL------------------ 246
+ +++ P+ + +N+LL AC + +D+ LFK+L
Sbjct: 495 VLYNQLQNSNDFTPDEILFNVLLDACINCKQLDRAVELFKQLKPQSQPQIQVSNTDDADN 554
Query: 247 ---------------------HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ 285
+ + PD ++N ++ + ++ + + MK
Sbjct: 555 SLSLEDSPDSAKNAPAVVNSSNHHFMRPDEISFNTIIKGCAQEKKLQLAFEMFNLMKMQC 614
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA- 344
KP+ +T+N LID+ + + Q+ + + P T++++I +A Q +
Sbjct: 615 LKPNDVTYNSLIDACVRCNRLNSAWQLLSEMQQNNIVPDNFTYSTLIKGI-RAENQSQNG 673
Query: 345 -------EYVFQKMTAMKYT-----PSFITYECIITMYGYCDNVSRAREIFDELSKLGKD 392
E F + MK + P I Y C+I +V+RA +F E+
Sbjct: 674 ISNPMDLEKAFALLEQMKQSNGGVKPDEILYNCLIDACVRFHDVNRAVAVFQEMQFSNIK 733
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
T +++AY A +F+ + + P+S TY L A K N E ++
Sbjct: 734 PSSVTYGILIKAYGSANQLDNAFFVFKKMKDNCLIPNSVTYGCLIDACVKNNQIERAMEV 793
Query: 453 LKRMEQNGIVPNKRFFLEALETFSSSLAGSQS 484
+ M+++G+ N F ++ F+ S Q+
Sbjct: 794 FETMKRDGVQLNTIIFTTLIKGFAKSFKLDQA 825
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 8/185 (4%)
Query: 292 TFNLLIDSYGKRQAFDKMEQVF-KSLMHSKEKPT---LPTFNSMIINYGKARLQGKAEYV 347
T N ++DS K + F++ EQ++ K SK++P + TF+ MI Y +A+ +A V
Sbjct: 329 TVNQMLDSLLKAELFEEAEQIYNKVFTLSKDQPNCMDMMTFSCMIKGYCRAQRLPQALNV 388
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
M P + Y II + +++A ++DE+ G T N++++
Sbjct: 389 LSIMKERGIKPDEVLYNSIIDGCSKNNQIAKAFLLYDEMLGEGVTPTTITFNSLIDCCVR 448
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ----NGIVP 463
+G +A + E V PD+ TY L+K N ++ ++K Q N P
Sbjct: 449 SGNQDQAWRVLEQMKEKQVKPDNYTYSTLFKGIKSENQRQDLEKAFVLYNQLQNSNDFTP 508
Query: 464 NKRFF 468
++ F
Sbjct: 509 DEILF 513
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 92/193 (47%), Gaps = 6/193 (3%)
Query: 129 LEVFRWMQKQRWYI-ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
+E+F M++ + D YS +I ++ + A+ + ++M + D +YN+L+
Sbjct: 862 MEIFEEMKQPISHTKPDLITYSTMIKGFCREKNIQQALIMLNDMEKNNIMADEVLYNSLL 921
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
KA + AL ++ M+ + + KP+ VTY+IL++ + RN+ + + +E+
Sbjct: 922 DGCC----KANEIEMALKVYKNMEIL-KIKPSNVTYSILIKIYGKQRNLPKALGVLEEMK 976
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
+ + P + Y ++ K+ +K E + M+ + D +T+ +I+ Q FD
Sbjct: 977 KDGIRPGLIVYTCLLQTCIKSRQLKTAEQLFHDMRIQGIRGDQLTYQTMINGCLYSQKFD 1036
Query: 308 KMEQVFKSLMHSK 320
+ + K SK
Sbjct: 1037 SILILLKDASDSK 1049
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 114/277 (41%), Gaps = 44/277 (15%)
Query: 196 KAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
+A+ L +AL MK ER KP+ V YN ++ C++ + + L+ E+ + P
Sbjct: 378 RAQRLPQALNVLSIMK--ERGIKPDEVLYNSIIDGCSKNNQIAKAFLLYDEMLGEGVTPT 435
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL---IDSYGKRQAFDKMEQ 311
T+N ++D ++G + VL +MK Q KPD T++ L I S +RQ +K
Sbjct: 436 TITFNSLIDCCVRSGNQDQAWRVLEQMKEKQVKPDNYTYSTLFKGIKSENQRQDLEKAFV 495
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
++ L +S + +TP I + ++
Sbjct: 496 LYNQLQNSND----------------------------------FTPDEILFNVLLDACI 521
Query: 372 YCDNVSRAREIFDELSKLGK-DMKVSTLNAMLEAYCMNGLPTEAD---LLFENSHNMGVT 427
C + RA E+F +L + ++VS + + + P A + +S++ +
Sbjct: 522 NCKQLDRAVELFKQLKPQSQPQIQVSNTDDADNSLSLEDSPDSAKNAPAVVNSSNHHFMR 581
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
PD ++ + K + +L ++ M+ + PN
Sbjct: 582 PDEISFNTIIKGCAQEKKLQLAFEMFNLMKMQCLKPN 618
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 85/206 (41%), Gaps = 34/206 (16%)
Query: 159 GQTRLAMWLFSEMRN-SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCK 217
QT+ A+ F +++ S + DP+ Y + L + KA+ +A + K+ + + +
Sbjct: 302 NQTQTALQYFHQLQQTSQAQNDPTYYQT-VNQMLDSLLKAELFEEAEQIYNKVFTLSKDQ 360
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
PN + D+ T++ ++ Y + + + +V
Sbjct: 361 PNCM--------------------------------DMMTFSCMIKGYCRAQRLPQALNV 388
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
LS MK KPD + +N +ID K K ++ ++ PT TFNS+I +
Sbjct: 389 LSIMKERGIKPDEVLYNSIIDGCSKNNQIAKAFLLYDEMLGEGVTPTTITFNSLIDCCVR 448
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITY 363
+ Q +A V ++M + P TY
Sbjct: 449 SGNQDQAWRVLEQMKEKQVKPDNYTY 474
>gi|168025874|ref|XP_001765458.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683308|gb|EDQ69719.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 670
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 173/396 (43%), Gaps = 54/396 (13%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI------YSKLIAVMGKKGQTRLAM 165
C L LG + Q L++FRWM+K GI ++ L+ G+ A+
Sbjct: 220 CTTLIAALGCGRRLSQALKLFRWMEK-------AGIERPIFTFNALMVACGRCASGDTAV 272
Query: 166 WLFSEMRNSGCRPDPSVYNALITA------------------------HLHTR------- 194
LF EM G PD + L++A LH
Sbjct: 273 ELFEEMEKLGIVPDRITFTGLVSATTAAGLWDRAQSFIDMMQARGFSIGLHEYIEMQWAC 332
Query: 195 DKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNAL--FKELHESI 250
+A+ +A G FQ M +G E + +YN LL CA R +A+ F + +
Sbjct: 333 ARARKPREAYGLFQVMLEQGYEL---KLESYNALL--CAYERTAQWEDAMRTFIWIQDKG 387
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
L PD+ +++ ++ A G + VL RMK++ C+P+++++ L+ +Y K ++K E
Sbjct: 388 LTPDVMSWSSLISACANAGQAERALEVLERMKTSDCQPNVVSWCGLLKAYQKTGNWEKAE 447
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
++F +++ S P + S++ Y K R K Y +K+ + + + I+
Sbjct: 448 EIFHAMLDSGCPPNEVAWCSLLSAYEKGRQWKKVLYTIEKLEELGMKLDVVAWSTTISAL 507
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
A E F +++K G + T +++++AY GL +A+ +F+ +G+ P+
Sbjct: 508 AKAGQWELAEEKFKQMTKSGCLPNIVTYSSLIKAYGDVGLWEKAESVFKLMLRVGIRPNP 567
Query: 431 STYKLLYKAYTKANMKELVQKLLKRME-QNGIVPNK 465
L +AY K E V + ME Q G+ P+K
Sbjct: 568 QACCALLRAYGKGKELEKVIIFFESMEPQYGVEPDK 603
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 141/316 (44%), Gaps = 6/316 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + Q AM F +++ G PD +++LI+A + A +AL
Sbjct: 360 YNALLCAYERTAQWEDAMRTFIWIQDKGLTPDVMSWSSLISACAN----AGQAERALEVL 415
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++MK + C+PN+V++ LL+A + N ++ +F + +S P+ + ++ AY K
Sbjct: 416 ERMKTSD-CQPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEVAWCSLLSAYEK 474
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
K++ + +++ K D++ ++ I + K ++ E+ FK + S P + T
Sbjct: 475 GRQWKKVLYTIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNIVT 534
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
++S+I YG L KAE VF+ M + P+ ++ YG + + F+ +
Sbjct: 535 YSSLIKAYGDVGLWEKAESVFKLMLRVGIRPNPQACCALLRAYGKGKELEKVIIFFESME 594
Query: 388 -KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
+ G + A+ A G A + G TPDS Y L Y
Sbjct: 595 PQYGVEPDKYAYAAIFWACWTCGEWQRAVKYIDRMEMAGCTPDSVIYTTLINMYEANGQI 654
Query: 447 ELVQKLLKRMEQNGIV 462
+ ++L+RM ++
Sbjct: 655 DKAMQVLERMGSGSLI 670
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 76/174 (43%), Gaps = 6/174 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +S I+ + K GQ LA F +M SGC P+ Y++LI A+ KA
Sbjct: 496 DVVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNIVTYSSLIKAY----GDVGLWEKA 551
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI-LAPDIYTYNGVM 262
F+ M + +PN LLRA + + +++V F+ + + PD Y Y +
Sbjct: 552 ESVFKLMLRV-GIRPNPQACCALLRAYGKGKELEKVIIFFESMEPQYGVEPDKYAYAAIF 610
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
A G + + RM+ C PD + + LI+ Y DK QV + +
Sbjct: 611 WACWTCGEWQRAVKYIDRMEMAGCTPDSVIYTTLINMYEANGQIDKAMQVLERM 664
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 101/260 (38%), Gaps = 2/260 (0%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+PN L+ A R + Q LF+ + ++ + I+T+N +M A G+
Sbjct: 214 EPNAYVCTTLIAALGCGRRLSQALKLFRWMEKAGIERPIFTFNALMVACGRCASGDTAVE 273
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-KPTLPTFNSMIINY 335
+ M+ PD ITF L+ + +D+ Q F +M ++ L + M
Sbjct: 274 LFEEMEKLGIVPDRITFTGLVSATTAAGLWDRA-QSFIDMMQARGFSIGLHEYIEMQWAC 332
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
+AR +A +FQ M Y +Y ++ Y A F + G V
Sbjct: 333 ARARKPREAYGLFQVMLEQGYELKLESYNALLCAYERTAQWEDAMRTFIWIQDKGLTPDV 392
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+ ++++ A G A + E P+ ++ L KAY K E +++
Sbjct: 393 MSWSSLISACANAGQAERALEVLERMKTSDCQPNVVSWCGLLKAYQKTGNWEKAEEIFHA 452
Query: 456 MEQNGIVPNKRFFLEALETF 475
M +G PN+ + L +
Sbjct: 453 MLDSGCPPNEVAWCSLLSAY 472
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 68/166 (40%), Gaps = 5/166 (3%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L K+ +W E F+ M K + + YS LI G G A +F M G RP
Sbjct: 507 LAKAGQWELAEEKFKQMTKSG-CLPNIVTYSSLIKAYGDVGLWEKAESVFKLMLRVGIRP 565
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
+P AL+ A+ K K L K + +F+ M+ +P+ Y + AC +
Sbjct: 566 NPQACCALLRAY----GKGKELEKVIIFFESMEPQYGVEPDKYAYAAIFWACWTCGEWQR 621
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
+ + PD Y +++ Y NG I + VL RM S
Sbjct: 622 AVKYIDRMEMAGCTPDSVIYTTLINMYEANGQIDKAMQVLERMGSG 667
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 130/314 (41%), Gaps = 46/314 (14%)
Query: 192 HTRDKAKALAKAL--GYFQKMKGMERCKPNIVTYN----ILLRACAQARNVDQVNALFKE 245
+T D + + +A GY +K + + PN + +N + +R ++ N D+ + K
Sbjct: 118 NTNDLGQVIRRAQFSGYLKKRR---KEPPNDILHNLAKAVAVRVASEKLNSDE--DVMKI 172
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
++E+ L D+ + N V+ G+ V +S +P+ LI + G +
Sbjct: 173 VNETGLRVDVRSMNVVVWQLGQMQNWYAATKVFRAFRSAGVEPNAYVCTTLIAALGCGRR 232
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+ ++F+ + + + + TFN++++ G+ A +F++M + P IT+
Sbjct: 233 LSQALKLFRWMEKAGIERPIFTFNALMVACGRCASGDTAVELFEEMEKLGIVPDRITFTG 292
Query: 366 IIT--------------------------------MYGYCDNVSRARE---IFDELSKLG 390
+++ M C + RE +F + + G
Sbjct: 293 LVSATTAAGLWDRAQSFIDMMQARGFSIGLHEYIEMQWACARARKPREAYGLFQVMLEQG 352
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
++K+ + NA+L AY +A F + G+TPD ++ L A A E
Sbjct: 353 YELKLESYNALLCAYERTAQWEDAMRTFIWIQDKGLTPDVMSWSSLISACANAGQAERAL 412
Query: 451 KLLKRMEQNGIVPN 464
++L+RM+ + PN
Sbjct: 413 EVLERMKTSDCQPN 426
>gi|302801820|ref|XP_002982666.1| hypothetical protein SELMODRAFT_421954 [Selaginella moellendorffii]
gi|300149765|gb|EFJ16419.1| hypothetical protein SELMODRAFT_421954 [Selaginella moellendorffii]
Length = 796
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 155/331 (46%), Gaps = 7/331 (2%)
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
F+W+++Q+WY+ T +S L+ G+ + + ++++ C YN LI +
Sbjct: 122 FQWIRRQKWYVPSTYSFSILLNTYGRGKDFQAVQRVLADLKADKCPMTTVAYNTLIKVY- 180
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KA L +A GY+++M+ RC P+I T+N L+ + A ++V ++ E+ +
Sbjct: 181 ---GKAHKLDEAWGYYKEMQD-SRCVPDIFTFNTLMSLYSYAGQSEKVLEVYDEMQKIGC 236
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
+ D Y V+ GK G + + RMK+ +P+ + ++ LI K + +
Sbjct: 237 SLDRVGYEVVVPHAGKVGRLDLACMLFERMKAEGHQPNAVAYSALIAGQLKSGRLEIGTK 296
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGK-ARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
F+ + + +P L TF S+I Y K RL+ ++ F+ M A Y P+ Y ++ +
Sbjct: 297 YFEEMRSLEIRPLLGTFASLIEAYCKSGRLETGLKF-FKDMEAFNYKPNLCIYAALVDAH 355
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
+ A E ++ + +G + ++E + G A L+ +G+ P
Sbjct: 356 AKAGMLDAALEFYERMRGVGLWLPPLIFAVLIEQHAQAGKAETAVRLYREMRGVGLRPSH 415
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
T +++ A K + V+++L M++ G+
Sbjct: 416 FTCRIVVGAVAKGGKYDDVERILFEMQEMGL 446
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 119/285 (41%), Gaps = 6/285 (2%)
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
G+FQ ++ + P+ +++ILL + ++ V + +L YN ++
Sbjct: 120 GFFQWIRRQKWYVPSTYSFSILLNTYGRGKDFQAVQRVLADLKADKCPMTTVAYNTLIKV 179
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
YGK + E M+ ++C PDI TFN L+ Y +K+ +V+ +
Sbjct: 180 YGKAHKLDEAWGYYKEMQDSRCVPDIFTFNTLMSLYSYAGQSEKVLEVYDEMQKIGCSLD 239
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ ++ + GK A +F++M A + P+ + Y +I + + F+
Sbjct: 240 RVGYEVVVPHAGKVGRLDLACMLFERMKAEGHQPNAVAYSALIAGQLKSGRLEIGTKYFE 299
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E+ L + T +++EAYC +G F++ P+ Y L A+ KA
Sbjct: 300 EMRSLEIRPLLGTFASLIEAYCKSGRLETGLKFFKDMEAFNYKPNLCIYAALVDAHAKAG 359
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKT 489
M + + +RM G+ F +E +Q+G A+T
Sbjct: 360 MLDAALEFYERMRGVGLWLPPLIFAVLIEQH------AQAGKAET 398
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 130/326 (39%), Gaps = 45/326 (13%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L+ G+S+K LEV+ MQK + G Y ++ GK G+ LA LF M+
Sbjct: 214 LYSYAGQSEK---VLEVYDEMQKIGCSLDRVG-YEVVVPHAGKVGRLDLACMLFERMKAE 269
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G +P+ Y+ALI L K+ L YF++M+ +E +P + T+ L+ A ++
Sbjct: 270 GHQPNAVAYSALIAGQL----KSGRLEIGTKYFEEMRSLE-IRPLLGTFASLIEAYCKSG 324
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC-------- 286
++ FK++ P++ Y ++DA+ K GM+ RM+
Sbjct: 325 RLETGLKFFKDMEAFNYKPNLCIYAALVDAHAKAGMLDAALEFYERMRGVGLWLPPLIFA 384
Query: 287 ---------------------------KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
+P T +++ + K +D +E++ M
Sbjct: 385 VLIEQHAQAGKAETAVRLYREMRGVGLRPSHFTCRIVVGAVAKGGKYDDVERILFE-MQE 443
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
N I+ + A +F K+T +TP I+ + C ++ A
Sbjct: 444 MGLNVADAVNDSIVKLVDDKRISDAWELFLKVTGHGFTPHVSLCREILHGFLSCGDMEHA 503
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAY 405
R++ + + G + + T +LE +
Sbjct: 504 RQMLSFMQRPGSAVDLRTYCMLLEFF 529
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 155/364 (42%), Gaps = 52/364 (14%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ L+ + ++G+ A+ L M G +P+ Y ++ D AL
Sbjct: 180 FTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL----NLL 235
Query: 208 QKMKGMERCKPNIVTYNILLRAC-AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+KM+ + R KPN+V Y+ ++ R D N LF E+ E ++P+++TYN +++ +
Sbjct: 236 RKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQN-LFSEMQEKGISPNLFTYNCMINGFC 294
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+G E + +L M + PD++TF++LI++ K F + E+++ ++ P
Sbjct: 295 SSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTI 354
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY---------------- 370
T+NSMI + K AE +F M +P IT+ +I Y
Sbjct: 355 TYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEM 414
Query: 371 -----------------GYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
G+C N++ A ++ E+ G V T N +L+ C NG
Sbjct: 415 SRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKL 474
Query: 412 TEADLLF----------ENSHNMG-VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+A +F + SH V PD TY +L ++L + M G
Sbjct: 475 KDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRG 534
Query: 461 IVPN 464
+VP+
Sbjct: 535 LVPD 538
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 157/353 (44%), Gaps = 22/353 (6%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L L K K+ + E++ M R I +T Y+ +I K+ + A +F M
Sbjct: 323 VLINALVKEGKFFEAEELYNEMLP-RGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMAT 381
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACA 231
GC PD ++ LI + AK + + +M +G+ N +TY L+
Sbjct: 382 KGCSPDVITFSILIDGYC----GAKRVDDGMKLLHEMSRRGL---VANTITYTTLIHGFC 434
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIK---EMESVLSRMKS----- 283
Q N++ L +E+ S + P++ T N ++D NG +K EM V+ + K
Sbjct: 435 QLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDAS 494
Query: 284 ---NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
N +PD+ T+N+LI F + E++++ + H P T+NS+I K
Sbjct: 495 HPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSR 554
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
+A +F M + ++P +T+ +I Y V E+F E+ + G T
Sbjct: 555 LDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRT 614
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK-LLYKAYTKANMKELVQKL 452
++ +C G A +F+ + GV PD+ T + +L ++K +K VQ L
Sbjct: 615 LIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 163/368 (44%), Gaps = 30/368 (8%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ + + K + L + R M++ + IYS +I + K G+ A LFSEM+
Sbjct: 218 IVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEK 277
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P+ YN +I + ++A F++ + P++VT+++L+ A +
Sbjct: 278 GISPNLFTYNCMINGFCSSGRWSEAQRLLREMFER-----KMSPDVVTFSVLINALVKEG 332
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ L+ E+ + P+ TYN ++D + K + E + M + C PD+ITF+
Sbjct: 333 KFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFS 392
Query: 295 LLIDSY-GKRQAFDKMEQVFKSLMHSKEKPTLP----TFNSMIINYGKARLQGKAEYVFQ 349
+LID Y G ++ D M+ L+H + L T+ ++I + + A + Q
Sbjct: 393 ILIDGYCGAKRVDDGMK-----LLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQ 447
Query: 350 KMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDM-----------KVS 396
+M + P+ +T C + G C+N + A E+F + K D+ V
Sbjct: 448 EMISSGVCPNVVT--CNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQ 505
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
T N ++ G +EA+ L+E + G+ PD+ TY + K + + ++ M
Sbjct: 506 TYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSM 565
Query: 457 EQNGIVPN 464
G P+
Sbjct: 566 GSKGFSPD 573
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 157/359 (43%), Gaps = 27/359 (7%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
S +W + + R M +++ D +S LI + K+G+ A L++EM G P+
Sbjct: 296 SGRWSEAQRLLREMFERKMS-PDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTI 354
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
YN++I +++ A A+ + Y KG C P+++T++IL+ A+ VD
Sbjct: 355 TYNSMIDG-FSKQNRLDA-AERMFYLMATKG---CSPDVITFSILIDGYCGAKRVDDGMK 409
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
L E+ L + TY ++ + + G + +L M S+ P+++T N L+D
Sbjct: 410 LLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLC 469
Query: 302 KRQAFDKMEQVFKSLMHSK-----------EKPTLPTFNSMI---INYGKARLQGKAEYV 347
++FK + SK +P + T+N +I IN GK +AE +
Sbjct: 470 NNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFS---EAEEL 526
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+++M P ITY +I G C + A ++FD + G V T ++ Y
Sbjct: 527 YEEMPHRGLVPDTITYNSVID--GLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGY 584
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
C G + +F G+ ++ TY+ L + + + + M +G+ P+
Sbjct: 585 CKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPD 643
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 108/267 (40%), Gaps = 54/267 (20%)
Query: 218 PNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
P++VT++ LL C + D+V+ H+ I P++ + +M+ + G + E +
Sbjct: 144 PSLVTFSTLLHGLCVE----DRVSEALHFFHQ-ICKPNVIAFTTLMNGLCREGRVVEAVA 198
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKR-------QAFDKMEQVFKSLMHSKEKPTLPTFN 329
+L RM + +P+ IT+ ++D K KME+V S+ KP + ++
Sbjct: 199 LLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEV------SRIKPNVVIYS 252
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
++I K Q A+ +F +M +P+ TY
Sbjct: 253 AIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTY-------------------------- 286
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
N M+ +C +G +EA L ++PD T+ +L A K
Sbjct: 287 ---------NCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEA 337
Query: 450 QKLLKRMEQNGIVPNKRFFLEALETFS 476
++L M GI+PN + ++ FS
Sbjct: 338 EELYNEMLPRGIIPNTITYNSMIDGFS 364
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 16/204 (7%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYI----------ADTGIYSKLIAVMGKKGQT 161
C L + L + K LE+F+ MQK + + D Y+ LI + +G+
Sbjct: 461 CNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKF 520
Query: 162 RLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV 221
A L+ EM + G PD YN++I K L +A F M G + P++V
Sbjct: 521 SEAEELYEEMPHRGLVPDTITYNSVIDGLC----KQSRLDEATQMFDSM-GSKGFSPDVV 575
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
T+ L+ + V +F E+ + + TY ++ + + G I + M
Sbjct: 576 TFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEM 635
Query: 282 KSNQCKPDIITF-NLLIDSYGKRQ 304
S+ PD IT N+L + K +
Sbjct: 636 ISSGVYPDTITIRNMLTGLWSKEE 659
>gi|410110129|gb|AFV61144.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
pusilla]
Length = 381
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 5/276 (1%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
D +YS LI + K A+ +FS ++ SG PD YNA+I KAK +
Sbjct: 3 GDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVF----GKAKLFRE 58
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A +MK PN +Y+ LL + + + ++F E+ E D+ T N ++
Sbjct: 59 ARSLISEMK-TAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMI 117
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D YG+ GM KE + + M+ +P+++++N L+ YG + F + +F+ + +
Sbjct: 118 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 177
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
+ T+NSM++ YGK KA + Q+M + P+ ITY II+++G + RA +
Sbjct: 178 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAML 237
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
F +L G ++ M+ Y GL A L
Sbjct: 238 FQKLRSTGVEIDQILFQTMIVXYERAGLIAHAKRLL 273
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 148/323 (45%), Gaps = 19/323 (5%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L SEM+ +G P+ + Y+ L+T ++
Sbjct: 32 KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVEN--- 88
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
K +AL F +M+ + +C ++ T NI++ Q + + LF + + + P++
Sbjct: 89 -KKFLEALSVFSEMREI-KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVV 146
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+YN ++ YG + E + M+ + +++T+N ++ YGK +K + + +
Sbjct: 147 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEM 206
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P T++++I +GK +A +FQK+ + I ++ +I Y +
Sbjct: 207 QSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQILFQTMIVXYERAGLI 266
Query: 377 SRAREIFDELSK---LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ A+ + EL + + +D + L G EA +F + + G D + +
Sbjct: 267 AHAKRLLHELKRPDNIPRDTAIHILAGA-------GRIEEATYVFRQAIDAGEVKDITVF 319
Query: 434 K----LLYKAYTKANMKELVQKL 452
+ LL K AN+ E+ K+
Sbjct: 320 ERMIHLLSKYKKYANVVEVFDKM 342
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 129/263 (49%), Gaps = 1/263 (0%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+KA+ F ++K P++V YN ++ +A+ + +L E+ + + P+ +Y+
Sbjct: 22 SKAISIFSRLK-RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYST 80
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ Y +N E SV S M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 81 LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 140
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P + ++N+++ YG A L G+A ++F+ M + +TY ++ +YG +A
Sbjct: 141 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 200
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ E+ G + T + ++ + G A +LF+ + GV D ++ + Y
Sbjct: 201 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQILFQTMIVXY 260
Query: 441 TKANMKELVQKLLKRMEQNGIVP 463
+A + ++LL +++ +P
Sbjct: 261 ERAGLIAHAKRLLHELKRPDNIP 283
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 118/250 (47%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
++V Y+ L+ + + + ++F L S PD+ YN +++ +GK + +E S++
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
S MK+ P+ +++ L+ Y + + F + VF + K L T N MI YG+
Sbjct: 64 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
+ +A+ +F M M P+ ++Y ++ +YG + A +F + + + V T
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 183
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N+M+ Y +A+ L + + G+ P+S TY + + K + L +++
Sbjct: 184 NSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 243
Query: 459 NGIVPNKRFF 468
G+ ++ F
Sbjct: 244 TGVEIDQILF 253
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 127/301 (42%), Gaps = 37/301 (12%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
++ K+L+ L VF M++ + + D + +I V G+ G + A LF MR G P+
Sbjct: 87 ENKKFLEALSVFSEMREIKCLL-DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 145
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
YN L L A+ +A+ F+ M+ + + N+VTYN ++ + ++ N
Sbjct: 146 VSYNTL----LRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVTYNSMMMIYGKTLEHEKAN 200
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
L +E+ + P+ TY+ ++ +GK G + + +++S + D I F +I Y
Sbjct: 201 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQILFQTMIVXY 260
Query: 301 --------GKRQAFD--------------------KMEQ---VFKSLMHSKEKPTLPTFN 329
KR + ++E+ VF+ + + E + F
Sbjct: 261 ERAGLIAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFE 320
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
MI K + VF KM + Y P ++ YG +A +++ E+ ++
Sbjct: 321 RMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQEV 380
Query: 390 G 390
G
Sbjct: 381 G 381
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 153/334 (45%), Gaps = 13/334 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D+ Y LI+ M K+G+ A LF +M G P+ YN LI + + D L +A
Sbjct: 318 DSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGD----LERA 373
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
Y +M KG+ P++ TYN+L+ A + + + + KE+ + + PD TYN +
Sbjct: 374 FSYRDEMVKKGI---MPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 430
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
++ Y + G K+ + + M S +P +T+ LI +R + + +F+ ++
Sbjct: 431 INGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 490
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRA 379
P + FN+M+ + +A + ++M P +T+ + M G C V A
Sbjct: 491 SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL--MQGRCREGKVEEA 548
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
R + DE+ + G + N ++ Y G +A + + ++G P TY L K
Sbjct: 549 RMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKC 608
Query: 440 YTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
K +L ++LLK M GI P+ +L +E
Sbjct: 609 LCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIE 642
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 156/351 (44%), Gaps = 9/351 (2%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
EL ++D+ +C +M K++ + + ++++ K + +A L++EM R
Sbjct: 191 ELRRADEAFKCF----YMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFR--LR 244
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
+VY I ++ K L KA + M+G+ KPN+V+YN ++ + N++
Sbjct: 245 ISSTVYTFNIMVNVLC--KEGKLKKAREFIGFMEGLG-FKPNVVSYNTIIHGYSSRGNIE 301
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ + + PD YTY ++ K G ++E + +M P+ +T+N LI
Sbjct: 302 GARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLI 361
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
D Y + ++ ++ P++ T+N ++ G+A+ + ++M
Sbjct: 362 DGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGII 421
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P ITY +I Y C N +A ++ +E+ G + T +++ EAD L
Sbjct: 422 PDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDL 481
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
FE + GV+PD + + + E LLK M++ + P++ F
Sbjct: 482 FEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTF 532
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 156/351 (44%), Gaps = 11/351 (3%)
Query: 115 LFEELGKSD-KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
LF +L + + W+ E+FR Y ++ ++ V+ K+G+ + A M
Sbjct: 223 LFLKLNRMEMAWVLYAEMFRLRISSTVYT-----FNIMVNVLCKEGKLKKAREFIGFMEG 277
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G +P+ YN +I + +R + + L ++KG+E P+ TY L+ +
Sbjct: 278 LGFKPNVVSYNTIIHGY-SSRGNIEGARRILDAM-RVKGIE---PDSYTYGSLISGMCKE 332
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+++ + LF ++ E L P+ TYN ++D Y G ++ S M P + T+
Sbjct: 333 GRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTY 392
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
NLL+ + + + + K + P T+N +I Y + KA + +M +
Sbjct: 393 NLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLS 452
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P+ +TY +I + + + A ++F+++ G V NAM++ +C NG
Sbjct: 453 KGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVER 512
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A +L + V PD T+ L + + E + LL M++ GI P+
Sbjct: 513 AFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPD 563
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 113/250 (45%), Gaps = 12/250 (4%)
Query: 221 VTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK-NGMIKEMESVL- 278
+ +++L+R C + R D+ F + E + P I T N ++ + K N M EM VL
Sbjct: 180 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRM--EMAWVLY 237
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG-K 337
+ M + + TFN++++ K K + + KP + ++N++I Y +
Sbjct: 238 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 297
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKV 395
++G A + M P TY +I+ G C + A +FD++ ++G
Sbjct: 298 GNIEG-ARRILDAMRVKGIEPDSYTYGSLIS--GMCKEGRLEEASGLFDKMVEIGLVPNA 354
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA-YTKANMKELVQKLLK 454
T N +++ YC G A + G+ P STY LL A + + M E ++K
Sbjct: 355 VTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGE-ADDMIK 413
Query: 455 RMEQNGIVPN 464
M + GI+P+
Sbjct: 414 EMRKKGIIPD 423
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 153/334 (45%), Gaps = 13/334 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D+ Y LI+ M K+G+ A LF +M G P+ YN LI + + D L +A
Sbjct: 296 DSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGD----LERA 351
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
Y +M KG+ P++ TYN+L+ A + + + + KE+ + + PD TYN +
Sbjct: 352 FSYRDEMVKKGI---MPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 408
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
++ Y + G K+ + + M S +P +T+ LI +R + + +F+ ++
Sbjct: 409 INGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 468
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRA 379
P + FN+M+ + +A + ++M P +T+ + M G C V A
Sbjct: 469 SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL--MQGRCREGKVEEA 526
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
R + DE+ + G + N ++ Y G +A + + ++G P TY L K
Sbjct: 527 RMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKC 586
Query: 440 YTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
K +L ++LLK M GI P+ +L +E
Sbjct: 587 LCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIE 620
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 156/351 (44%), Gaps = 9/351 (2%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
EL ++D+ +C +M K++ + + ++++ K + +A L++EM R
Sbjct: 169 ELRRADEAFKCF----YMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFR--LR 222
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
+VY I ++ K L KA + M+G+ KPN+V+YN ++ + N++
Sbjct: 223 ISSTVYTFNIMVNVLC--KEGKLKKAREFIGFMEGLG-FKPNVVSYNTIIHGYSSRGNIE 279
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ + + PD YTY ++ K G ++E + +M P+ +T+N LI
Sbjct: 280 GARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLI 339
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
D Y + ++ ++ P++ T+N ++ G+A+ + ++M
Sbjct: 340 DGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGII 399
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P ITY +I Y C N +A ++ +E+ G + T +++ EAD L
Sbjct: 400 PDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDL 459
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
FE + GV+PD + + + E LLK M++ + P++ F
Sbjct: 460 FEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTF 510
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 156/351 (44%), Gaps = 11/351 (3%)
Query: 115 LFEELGKSD-KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
LF +L + + W+ E+FR Y ++ ++ V+ K+G+ + A M
Sbjct: 201 LFLKLNRMEMAWVLYAEMFRLRISSTVYT-----FNIMVNVLCKEGKLKKAREFIGFMEG 255
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G +P+ YN +I + +R + + L ++KG+E P+ TY L+ +
Sbjct: 256 LGFKPNVVSYNTIIHGY-SSRGNIEGARRILDAM-RVKGIE---PDSYTYGSLISGMCKE 310
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+++ + LF ++ E L P+ TYN ++D Y G ++ S M P + T+
Sbjct: 311 GRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTY 370
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
NLL+ + + + + K + P T+N +I Y + KA + +M +
Sbjct: 371 NLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLS 430
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P+ +TY +I + + + A ++F+++ G V NAM++ +C NG
Sbjct: 431 KGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVER 490
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A +L + V PD T+ L + + E + LL M++ GI P+
Sbjct: 491 AFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPD 541
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 113/250 (45%), Gaps = 12/250 (4%)
Query: 221 VTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK-NGMIKEMESVL- 278
+ +++L+R C + R D+ F + E + P I T N ++ + K N M EM VL
Sbjct: 158 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRM--EMAWVLY 215
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG-K 337
+ M + + TFN++++ K K + + KP + ++N++I Y +
Sbjct: 216 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 275
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKV 395
++G A + M P TY +I+ G C + A +FD++ ++G
Sbjct: 276 GNIEG-ARRILDAMRVKGIEPDSYTYGSLIS--GMCKEGRLEEASGLFDKMVEIGLVPNA 332
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA-YTKANMKELVQKLLK 454
T N +++ YC G A + G+ P STY LL A + + M E ++K
Sbjct: 333 VTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGE-ADDMIK 391
Query: 455 RMEQNGIVPN 464
M + GI+P+
Sbjct: 392 EMRKKGIIPD 401
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 190/462 (41%), Gaps = 41/462 (8%)
Query: 5 NLSPYSLRLSTLSSSSASSSSSSSSSSFNQSSSQNYNFTHRHIPLSLRTRPRTGICCVWT 64
NLSP S ST+ SS +SS+ + ++ + H PLSL R
Sbjct: 15 NLSPLSTHSSTIPSSIPQTSSTHHPNPILPAAFNREEISFHH-PLSLFLR---------- 63
Query: 65 RPRSKRGRKSEELESKELVRVLMRS--FSDKEPLVRTLNKYVKVVRSEHCFLLFEEL--- 119
K G + +++ ++MRS R L K+ F L+ E+
Sbjct: 64 --NCKTGNITA-IQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLA 120
Query: 120 GKSDKWL------QCL-------EVFRWMQK--QRWYIADTGIYSKLIAVMGKKGQTRLA 164
G S CL E M +R YI + Y+ LI + + + A
Sbjct: 121 GLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEA 180
Query: 165 MWLFSEMRNSGCRPDPSVYNALITAHLHTRDK--AKALAKALGYFQKMKGMERCKPNIVT 222
LF M+ GC P+ Y LI T + A L K + G+ CKP ++T
Sbjct: 181 TRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGV-NCKPGVIT 239
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y+I++ + D+ LF+E+ + PD+ +Y+ ++ + G + + + M
Sbjct: 240 YSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMV 299
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
+PD++TF++LID+ K + +++ + ++ P L T+NS+I +
Sbjct: 300 DQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLN 359
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNA 400
A +F M + P I+Y +I GYC V A +++E+ ++GK V+T
Sbjct: 360 SARELFLSMPSKGLEPDEISYTTLIN--GYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGT 417
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+L+ G +A LF GV+ +S Y + K
Sbjct: 418 LLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCK 459
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 150/354 (42%), Gaps = 44/354 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALG 205
YS +I + K G+ A LF EM+ G PD Y+ LI D++K L
Sbjct: 240 YSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHL----- 294
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
F +M + +P++VT+++L+ + V + L + + + + P++ TYN ++D +
Sbjct: 295 -FDEMVD-QGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGF 352
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
G + + M S +PD I++ LI+ Y K + ++ ++ + P +
Sbjct: 353 CMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNV 412
Query: 326 PTFNSMIIN-------------YGKARLQG----------------------KAEYVFQK 350
T+ +++ +G + G +A +F +
Sbjct: 413 TTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNE 472
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
+ + + + Y C+I + A E+F++LS+ G V T N M+ +C G
Sbjct: 473 LKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQ 532
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A++LFE G TPD Y L + + N E V KLL +M Q + PN
Sbjct: 533 VDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPN 586
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 152/360 (42%), Gaps = 50/360 (13%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSG------CRPDPSVYNALITA--HLHTRDKAKA 199
Y LI + + G +A+ L EM N C+P Y+ +I + D+AK
Sbjct: 199 YGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKE 258
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L F++MK + P++++Y+ L+ A DQ LF E+ + + PD+ T++
Sbjct: 259 L------FEEMKA-QGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFS 311
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
++D K G + E + +L M P++IT+N LID + + ++F S+
Sbjct: 312 VLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSK 371
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI------------- 366
+P ++ ++I Y K +A ++ +M + +P+ TY +
Sbjct: 372 GLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDA 431
Query: 367 --------------------ITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEA 404
I + G C N + A E+F+EL + + + +++
Sbjct: 432 KKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDG 491
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
C G A LFE G+ PD TY ++ + K + L ++ME+NG P+
Sbjct: 492 LCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPD 551
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 152/346 (43%), Gaps = 14/346 (4%)
Query: 126 LQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNA 185
+Q F M + I +++L+ + K L++EMR +G PD +
Sbjct: 73 IQAFHFFDLMMRSHP-IPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSI 131
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
L + ++ALA G ++ PN+VTY L++ + + LF
Sbjct: 132 LANCLCNVNRVSEALAAMAGILRRGY-----IPNVVTYTTLIKGLCMEHRISEATRLFLR 186
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMI-------KEMESVLSRMKSNQCKPDIITFNLLID 298
+ + P+ TY ++ + G + KEM + S+ N CKP +IT++++ID
Sbjct: 187 MQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVN-CKPGVITYSIIID 245
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
K D+ +++F+ + P + +++++I + A +++++F +M P
Sbjct: 246 GLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQP 305
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+T+ +I V+ A+++ + + + G + T N++++ +CM G A LF
Sbjct: 306 DMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELF 365
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ + G+ PD +Y L Y K + L M Q G PN
Sbjct: 366 LSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPN 411
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 82/166 (49%), Gaps = 5/166 (3%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
A++ IY + + K AM LF+E+++ + + Y+ LI KA L
Sbjct: 445 ANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLC----KAGKLET 500
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A F+K+ E +P++VTYNI++ + VD N LF+++ E+ PDI YN ++
Sbjct: 501 AWELFEKLS-QEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLL 559
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
+ + ++E+ +L +M P+ + +++D K + + K
Sbjct: 560 CGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKK 605
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 108/259 (41%), Gaps = 9/259 (3%)
Query: 225 ILLRACAQARNVDQVNAL--FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
+ LR C + N+ + A F + S P I ++N ++ K ++ S+ + M+
Sbjct: 60 LFLRNC-KTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMR 118
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
PD+ T ++L + + ++ P + T+ ++I
Sbjct: 119 LAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRIS 178
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA----REIFDELSKLGKDMK--VS 396
+A +F +M + TP+ +TY +I NV+ A +E+ ++ S+ G + K V
Sbjct: 179 EATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVI 238
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
T + +++ C G EA LFE G+ PD +Y L + A + + L M
Sbjct: 239 TYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEM 298
Query: 457 EQNGIVPNKRFFLEALETF 475
G+ P+ F ++T
Sbjct: 299 VDQGVQPDMVTFSVLIDTL 317
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 93/222 (41%), Gaps = 5/222 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI K + + AM L++EM G P+ + Y L+ L + K K G
Sbjct: 380 YTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKG-LFQKGKVGDAKKLFGVM 438
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K G+ N Y I L + + + LF EL +I Y+ ++D K
Sbjct: 439 -KTYGVSA---NSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCK 494
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G ++ + ++ +PD++T+N++I + K D +F+ + + P +
Sbjct: 495 AGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIA 554
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
+N+++ + + + + KM +P+ + ++ M
Sbjct: 555 YNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDM 596
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 86/190 (45%), Gaps = 6/190 (3%)
Query: 91 SDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSK 150
D + L + Y S+ + + L K+D + +E+F ++ + + + YS
Sbjct: 429 GDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKL-NIENYSC 487
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
LI + K G+ A LF ++ G +PD YN +I H K + A F+KM
Sbjct: 488 LIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMI----HGFCKVGQVDNANILFEKM 543
Query: 211 KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
+ C P+I+ YN LL + +++V L ++ + ++P+ + V+D K+
Sbjct: 544 EE-NGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEK 602
Query: 271 IKEMESVLSR 280
K+ +L +
Sbjct: 603 YKKFVDLLPK 612
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 151/334 (45%), Gaps = 13/334 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D+ Y LI+ M K+G+ A LF +M G P+ YN LI + + D L +A
Sbjct: 242 DSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGD----LERA 297
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
Y +M KG+ P++ TYN+L+ A + + + + KE+ + + PD TYN +
Sbjct: 298 FSYRDEMVKKGI---MPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 354
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
++ Y + G K + + M S +P +T+ LI +R + + +F+ ++
Sbjct: 355 INGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 414
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRA 379
P + FN+MI + +A + ++M P +T+ + M G C V A
Sbjct: 415 SPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL--MQGRCREGKVEEA 472
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
R + DE+ G + N ++ Y G +A + + ++G P TY L K
Sbjct: 473 RMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKC 532
Query: 440 YTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
K +L ++LLK M GI P+ +L +E
Sbjct: 533 LCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIE 566
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 151/355 (42%), Gaps = 27/355 (7%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
V ++ + DT Y + ++ + +LA+ L ++ + + +++ L
Sbjct: 112 VSDFIHHLHPHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMETRIATNRELFDELTL-- 169
Query: 191 LHTRDKAKA------------LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
+RD+ L KA + M+G+ KPN+V+YN ++ + N++
Sbjct: 170 --SRDRLSVKSSIVFDLLEGKLKKAREFIGFMEGLG-FKPNVVSYNTIIHGYSSRGNIEG 226
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+ + + PD YTY ++ K G ++E + +M P+ +T+N LID
Sbjct: 227 ARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLID 286
Query: 299 SYGKRQAFDKM-----EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
Y + ++ E V K +M P++ T+N ++ G+A+ + ++M
Sbjct: 287 GYCNKGDLERAFSYRDEMVKKGIM-----PSVSTYNLLVHALFMEGRMGEADDMIKEMRK 341
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P ITY +I Y C N RA ++ +E+ G + T +++ E
Sbjct: 342 KGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKE 401
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
AD LFE + GV+PD + + + E LLK M++ + P++ F
Sbjct: 402 ADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTF 456
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 135/307 (43%), Gaps = 5/307 (1%)
Query: 158 KGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCK 217
+G+ + A M G +P+ YN +I + +R + + L ++KG+E
Sbjct: 186 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGY-SSRGNIEGARRILDAM-RVKGIE--- 240
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+ TY L+ + +++ + LF ++ E L P+ TYN ++D Y G ++ S
Sbjct: 241 PDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSY 300
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
M P + T+NLL+ + + + + K + P T+N +I Y +
Sbjct: 301 RDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSR 360
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
+A + +M + P+ +TY +I + + + A ++F+++ G V
Sbjct: 361 CGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIM 420
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
NAM++ +C NG A +L + V PD T+ L + + E + LL M+
Sbjct: 421 FNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMK 480
Query: 458 QNGIVPN 464
GI P+
Sbjct: 481 XRGIKPD 487
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 163/357 (45%), Gaps = 50/357 (14%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y ++ + K+G LA L ++M + D ++N +I + K + + AL F
Sbjct: 152 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC----KYRHVDDALNLF 207
Query: 208 QKM--KGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
++M KG+ +PN+VTY+ L+ C+ R D + L ++ E + P++ T+N ++DA
Sbjct: 208 KEMETKGI---RPNVVTYSSLISCLCSYGRWSD-ASQLLSDMIEKKINPNLVTFNALIDA 263
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ K G E E + M PDI T+N LI+ + DK +Q+F+ ++ P
Sbjct: 264 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 323
Query: 325 LPTFNSMIINYGKAR---------------------------LQG--------KAEYVFQ 349
L T+N++I + K++ +QG A+ VF+
Sbjct: 324 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 383
Query: 350 KMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
+M + P +TY I + G C+N + +A E+FD + K + + M+E C
Sbjct: 384 QMVSDGVPPDIMTYS--ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 441
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G + LF + GV P+ TY + + + LLK+M+++G +P+
Sbjct: 442 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPD 498
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 145/305 (47%), Gaps = 13/305 (4%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVT 222
A+ L +M G RPD + LI L +KA ++A+ +M ++R C+PN+VT
Sbjct: 98 AVALVDQMVEMGYRPDTITFTTLIHG-LFLHNKA---SEAVALVDRM--VQRGCQPNLVT 151
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y +++ + ++D L ++ + + D+ +N ++D+ K + + ++ M+
Sbjct: 152 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 211
Query: 283 SNQCKPDIITFNLLID---SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
+ +P+++T++ LI SYG+ + Q+ ++ K P L TFN++I + K
Sbjct: 212 TKGIRPNVVTYSSLISCLCSYGR---WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 268
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLN 399
+AE + M P TY +I + D + +A+++F+ + + T N
Sbjct: 269 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYN 328
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
+++ +C + + LF + G+ D+ TY L + + QK+ K+M +
Sbjct: 329 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 388
Query: 460 GIVPN 464
G+ P+
Sbjct: 389 GVPPD 393
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 129/311 (41%), Gaps = 44/311 (14%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH-LHTR-DKAKALAKALG 205
++ LI K+G+ A L +M PD YN+LI +H R DKAK +
Sbjct: 257 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM----- 311
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
F+ M + C P++ TYN L++ +++ V+ LF+E+ L D TY ++
Sbjct: 312 -FEFMVSKD-CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 369
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+G + V +M S+ PDI+T+++L+D +K +VF + S+ K +
Sbjct: 370 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 429
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
+ +MI KA GK V ++F
Sbjct: 430 YIYTTMIEGMCKA---GK--------------------------------VDDGWDLFCS 454
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
LS G V T N M+ C L EA L + G PDS TY L +A+ +
Sbjct: 455 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 514
Query: 446 KELVQKLLKRM 456
K +L++ M
Sbjct: 515 KAASAELIREM 525
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 151/343 (44%), Gaps = 11/343 (3%)
Query: 156 GKKGQTRLAMWLFSEMRNSGCRPDPSVY--NALITAHLHTRDKAKALAKALGYFQKMKGM 213
GK + A+ LF M S RP PS++ N L++A + K L +L KM +
Sbjct: 18 GKDLKLDDAIGLFGGMVKS--RPLPSIFEFNKLLSAI--AKMKKFDLVISLALLGKMMKL 73
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
+P+IVT + LL + + AL ++ E PD T+ ++ + E
Sbjct: 74 GY-EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 132
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
+++ RM C+P+++T+ ++++ KR D + + +K + + FN++I
Sbjct: 133 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIID 192
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
+ K R A +F++M P+ +TY +I+ S A ++ ++ + +
Sbjct: 193 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 252
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
+ T NA+++A+ G EA+ L ++ + PD TY L + + + +++
Sbjct: 253 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF 312
Query: 454 KRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTRSLS 496
+ M P+ L+ T S+ T+L R +S
Sbjct: 313 EFMVSKDCFPD----LDTYNTLIKGFCKSKRVEDGTELFREMS 351
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 6/171 (3%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E+FR M R + DT Y+ LI + G A +F +M + G PD Y+ L+
Sbjct: 345 ELFREMS-HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 403
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ KAL + Y QK K +I Y ++ +A VD LF L
Sbjct: 404 LCNNGKLEKAL-EVFDYMQK----SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 458
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
+ P++ TYN ++ +++E ++L +MK + PD T+N LI ++
Sbjct: 459 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAH 509
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 84/206 (40%), Gaps = 8/206 (3%)
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ--VFKSLMHSKE 321
++GK+ + + + M ++ P I FN L+ + K + FD + + +M
Sbjct: 16 SWGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGY 75
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
+P++ T +S++ Y + A + +M M Y P IT+ +I + S A
Sbjct: 76 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 135
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM---GVTPDSSTYKLLYK 438
+ D + + G + T ++ C G + DL F + M + D + +
Sbjct: 136 LVDRMVQRGCQPNLVTYGVVVNGLCKRG---DIDLAFNLLNKMEAAKIEADVVIFNTIID 192
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPN 464
+ K + L K ME GI PN
Sbjct: 193 SLCKYRHVDDALNLFKEMETKGIRPN 218
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L + K + LEVF +MQK + D IY+ +I M K G+ LF +
Sbjct: 399 ILLDGLCNNGKLEKALEVFDYMQKSEIKL-DIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 457
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA 229
G +P+ YN +I+ R L +A +KMK + P+ TYN L+RA
Sbjct: 458 KGVKPNVVTYNTMISGLCSKR----LLQEAYALLKKMKE-DGPLPDSGTYNTLIRA 508
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 156/367 (42%), Gaps = 46/367 (12%)
Query: 115 LFEELGKSDKWLQCLEVFRWM-QKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
L E L K ++W + E+ R M + D YS L++ K G+ + L E+ +
Sbjct: 51 LLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVIS 110
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER--CKPNIVTYNILLRACA 231
G RPD +Y ++ + + A+ + ++ M R C P ++T+N L+ C
Sbjct: 111 RGLRPDALMYTKVVASLCKS-------ARLGEALELLEEMIRAGCCPTLITFNTLISGCC 163
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ +N++ ++L +++ S + D+ TYN +MD K G ++E E +L RMK++ C PD++
Sbjct: 164 REKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVV 223
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
++ + K QV + + S P + T+N+++ K+ GK + + M
Sbjct: 224 AYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKS---GKIDTALEMM 280
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV-STLNAMLEAYCMNGL 410
M + C + + GY + D L KLG+ + S + AM A C
Sbjct: 281 EQMASSDG-----CGLNVVGY-------STVVDGLCKLGRTQEARSVMEAMARAGC---- 324
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
PD TY L KA E + ++ M G PN +
Sbjct: 325 ----------------RPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCS 368
Query: 471 ALETFSS 477
+ S
Sbjct: 369 LVHGLCS 375
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 168/412 (40%), Gaps = 34/412 (8%)
Query: 78 ESKELVRVLM----RSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFR 133
E++ELVR ++ RS D L+ Y K + E L +E+ + R
Sbjct: 63 EAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEV-----------ISR 111
Query: 134 WMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT 193
++ D +Y+K++A + K + A+ L EM +GC P +N LI+
Sbjct: 112 GLRP------DALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISG--CC 163
Query: 194 RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP 253
R+K +A +L QKM K ++VTYN L+ +A + + L + + S AP
Sbjct: 164 REKNLEMADSL--LQKMAA-SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAP 220
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
D+ Y+ + K+G + + VL +M+ + P+++T+N ++D K D ++
Sbjct: 221 DVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMM 280
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARL--QGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+ M S + L + G +L +A V + M P +TY ++
Sbjct: 281 EQ-MASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLC 339
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN-----SHNMGV 426
+ A E E++ G T +++ C G EA+ + E
Sbjct: 340 KAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHC 399
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
P STY L KA + K +RM G P+ + +E + S
Sbjct: 400 PPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARS 451
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 139/330 (42%), Gaps = 39/330 (11%)
Query: 171 MRNSGCRPDPSVYNALITAH---------------LHTRDKAKALAKALGYFQKMKGMER 215
M +GC P+ +NAL+ + RD + G + + +ER
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 216 -----------------CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
P++VTY+ LL +A V++ L KE+ L PD Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
V+ + K+ + E +L M C P +ITFN LI + + + + + + +
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180
Query: 319 SKEKPTLPTFNSMIINYGKA-RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN-- 375
S K + T+N+++ KA RLQ +AE + ++M A P + Y + YG C +
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQ-EAEQLLERMKASGCAPDVVAYSSFV--YGLCKSGK 237
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG-LPTEADLLFENSHNMGVTPDSSTYK 434
V A ++ +++ D V T N +L+ C +G + T +++ + + + G + Y
Sbjct: 238 VLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYS 297
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ K + + +++ M + G P+
Sbjct: 298 TVVDGLCKLGRTQEARSVMEAMARAGCRPD 327
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 125/282 (44%), Gaps = 11/282 (3%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
AD Y+ L+ + K G+ + A L M+ SGC PD Y++ + + K+ +
Sbjct: 185 ADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFV----YGLCKSGKVLD 240
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI-LAPDIYTYNGV 261
A ++M+ PN+VTYN +L ++ +D + +++ S ++ Y+ V
Sbjct: 241 AHQVLEQMRDSHH-DPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTV 299
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+D K G +E SV+ M C+PD++T++ L++ K ++ + + +
Sbjct: 300 VDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGC 359
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT-----PSFITYECIITMYGYCDNV 376
KP T+ S++ +AE + ++M++ PS TY +I +
Sbjct: 360 KPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRI 419
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
A + F + G D + + ++E +G +A+++
Sbjct: 420 DDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMIL 461
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 8/143 (5%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS L+ + K G+ A+ EM GC+P+ Y +L+ H LA+A
Sbjct: 327 DVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLV----HGLCSCGRLAEA 382
Query: 204 LGYFQKMKGMER----CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
++M C P++ TYN L+ +A +D F+ + PD +Y+
Sbjct: 383 ERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYS 442
Query: 260 GVMDAYGKNGMIKEMESVLSRMK 282
+++ ++G + E +LS ++
Sbjct: 443 TIVEGLARSGRALQAEMILSEVR 465
>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
Length = 526
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 147/332 (44%), Gaps = 14/332 (4%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG--CRPDPSVYNALITAHLHTRDK 196
R I D Y+ L+ + + +++ A+ L M + G C PD Y+ +I D
Sbjct: 45 RRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDL 104
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
K L +R PN+VTYN ++ A +A+ VD+ + + +S + PD
Sbjct: 105 DKMLD------------QRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCM 152
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TYN ++ + +G KE L +M+S+ +PD++T+N L+D K + ++F S+
Sbjct: 153 TYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSM 212
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
KP + T+ +++ Y + + M P+ + ++ Y + V
Sbjct: 213 TKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKV 272
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
A +F ++ + G + T +++ C +G +A L FE + G+ PDS Y L
Sbjct: 273 EEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSL 332
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+ + E ++L M GI + FF
Sbjct: 333 IHSLCIFDKWEKAEELFLEMLDRGICLSTIFF 364
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 138/317 (43%), Gaps = 15/317 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +IA + K AM + + M SG PD YN+++ + +A+ +
Sbjct: 119 YNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIV----FL 174
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+KM+ + +P++VTYN L+ + + +F + + L PDI TY ++ Y
Sbjct: 175 KKMRS-DGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYAT 233
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + EM +L M N P+ F++L+ +Y K++ ++ VF + P T
Sbjct: 234 KGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVT 293
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ ++I K+ A F++M P I Y +I D +A E+F E+
Sbjct: 294 YGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEML 353
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G + N++++++C G E+ LF+ +GV PD T +
Sbjct: 354 DRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITL----------GRND 403
Query: 448 LVQKLLKRMEQNGIVPN 464
+ L NG+VPN
Sbjct: 404 EAKDLFVAFSSNGLVPN 420
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 122/268 (45%), Gaps = 9/268 (3%)
Query: 213 MERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHES-ILAPDIYTYNGVMDAYGKNGM 270
+ R P++ +YNILL C + R+ + + L + PD+ +Y+ V+ NG
Sbjct: 44 LRRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVI-----NGF 98
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
KE + L +M + P+++T+N +I + K Q DK +V +++ S P T+NS
Sbjct: 99 FKEGD--LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNS 156
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
++ + + +A +KM + P +TY ++ + AR+IFD ++K G
Sbjct: 157 IVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRG 216
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
++T +L+ Y G E L + G+ P+ + +L AY K E
Sbjct: 217 LKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAM 276
Query: 451 KLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ +M Q G+ PN + ++ S
Sbjct: 277 LVFSKMRQQGLNPNAVTYGTVIDVLCKS 304
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 84/201 (41%), Gaps = 29/201 (14%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
K +K + + VF M++Q + Y +I V+ K G+ AM F +M + G RPD
Sbjct: 268 KQEKVEEAMLVFSKMRQQGLN-PNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDS 326
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV---- 236
VYN+LI + L DK + KA F +M C I +I+ C + R +
Sbjct: 327 IVYNSLIHS-LCIFDKWE---KAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGK 382
Query: 237 --------------------DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
D+ LF + L P+ +TY + + G+++E++
Sbjct: 383 LFDLMVRIGVKPDIITLGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQ 442
Query: 277 VLSRMKSNQCKPDIITFNLLI 297
+ M+ N C D N ++
Sbjct: 443 LFLSMEDNGCTVDSGMLNFIV 463
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 169/415 (40%), Gaps = 41/415 (9%)
Query: 88 RSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI 147
R F + + RT+++ +L + + + ++ ++ MQ R+ D
Sbjct: 241 RRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQ-HRYVTPDVVS 299
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+S LI + ++G+ A EM+ G PD +Y +I +A ++++AL
Sbjct: 300 FSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFC----RAGSMSEALRVR 355
Query: 208 QKMKGMERCKPNIVTYNILLRA-CAQAR-------------------------------- 234
+M G C P++VTYN LL C Q R
Sbjct: 356 DEMVGFG-CLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCR 414
Query: 235 --NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
N + LF L L PD+ TYN ++D + G + + + M + + P+ IT
Sbjct: 415 QGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHIT 474
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+++LIDS+ ++ + ++ P + T+NS+I Y ++ K + QKM
Sbjct: 475 YSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMR 534
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
P IT+ +I Y +N+ A +F+ + K T N ++ + G
Sbjct: 535 QDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQ 594
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
+A +F+ + G+ PD TY L + A + +L M G P+ +F
Sbjct: 595 DAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPDDKF 649
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 163/362 (45%), Gaps = 6/362 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ + L K ++ + EVFR M Q D ++ LI + G+ + A+ + EM++
Sbjct: 233 VLKGLCKHRRFDKAKEVFRTMD-QCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHR 291
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
PD ++ LI L +R A A Y ++MKG+ P+ V Y +++ +A
Sbjct: 292 YVTPDVVSFSCLIG--LFSRRGEMDHAGA--YLREMKGLGLV-PDGVIYTMVIGGFCRAG 346
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
++ + + E+ PD+ TYN +++ K + + E +L+ M+ PD+ TF
Sbjct: 347 SMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFT 406
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
LI Y ++ F+ Q+F +L+ + +P + T+NS+I + KA ++ M A
Sbjct: 407 TLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAR 466
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ P+ ITY +I + V A DE+ K G + T N++++ YC +G +
Sbjct: 467 EILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKG 526
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
+ V PD T+ L Y K + ME+ + P+ + +
Sbjct: 527 QQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIING 586
Query: 475 FS 476
FS
Sbjct: 587 FS 588
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 161/359 (44%), Gaps = 25/359 (6%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR-- 194
++R D ++ LI + G A+ L M N G +P YN+++ R
Sbjct: 184 EKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRF 243
Query: 195 DKAKALAKALGYFQKMKGMERCK--PNIVTYNILLRACAQARNVDQVNALFKELHESILA 252
DKAK + + M++C P++ ++NIL+ + V + +KE+ +
Sbjct: 244 DKAKEV---------FRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVT 294
Query: 253 PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
PD+ +++ ++ + + G + + L MK PD + + ++I + + + + +V
Sbjct: 295 PDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRV 354
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGY 372
++ P + T+N+++ K AE + +M TP T+ +I +GY
Sbjct: 355 RDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLI--HGY 412
Query: 373 C--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
C N A ++FD L + V T N++++ C G +A+ L+++ H + P+
Sbjct: 413 CRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNH 472
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG-SQSGSAK 488
TY +L ++ + E L M + G +PN R T++S + G +SG+ K
Sbjct: 473 ITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIR-------TYNSIIKGYCRSGNVK 524
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 147/347 (42%), Gaps = 12/347 (3%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
LL +S K + E FR + R + + + L+AV+ + G LA + + +
Sbjct: 92 LLIRTYTQSRKPREAFEAFRLLLDHRVPVPASA-SNALLAVLSRAGWPHLAQEAYRLVLS 150
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCK-PNIVTYNILLRACAQ 232
S D V + +H+ K A +M+ +RC P++VT+N+L+ A +
Sbjct: 151 S----DSEVNAYTLNIMVHSYCKTLEFDGADTVISEME--KRCVFPDVVTHNVLIDARFR 204
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
A +VD AL + L P I TYN V+ K+ + + V M PD+ +
Sbjct: 205 AGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRS 264
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
FN+LI + + + + +K + H P + +F+ +I + + A ++M
Sbjct: 265 FNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMK 324
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ P + Y +I + ++S A + DE+ G V T N +L C
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLL 384
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTK----ANMKELVQKLLKR 455
+A+ L GVTPD T+ L Y + N +L LL++
Sbjct: 385 DAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQ 431
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 149/374 (39%), Gaps = 61/374 (16%)
Query: 149 SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQ 208
S L+ + ++G +R + S + S P P V++ LI + +R +A F+
Sbjct: 58 SLLLRMSRRRGASRRE--IVSSLLASSPTPQPQVFDLLIRTYTQSRKPREA-------FE 108
Query: 209 KMKGM--ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD----IYTYNGVM 262
+ + R N LL ++A L +E + +L+ D YT N ++
Sbjct: 109 AFRLLLDHRVPVPASASNALLAVLSRA----GWPHLAQEAYRLVLSSDSEVNAYTLNIMV 164
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS----------------------- 299
+Y K ++V+S M+ PD++T N+LID+
Sbjct: 165 HSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLK 224
Query: 300 ------------YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
K + FDK ++VF+++ P + +FN +I + + +A
Sbjct: 225 PGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKF 284
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
+++M TP +++ C+I ++ + A E+ LG ++ +C
Sbjct: 285 YKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCR 344
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
G +EA + + G PD TY L K + +KLL ME+ G+ P+
Sbjct: 345 AGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPD--- 401
Query: 468 FLEALETFSSSLAG 481
L TF++ + G
Sbjct: 402 ----LCTFTTLIHG 411
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 162/354 (45%), Gaps = 14/354 (3%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG-CRPDPSVYNALI 187
LEV R M+++ D Y+ LI+ K G+ A+ +F EM G P +YNALI
Sbjct: 167 LEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALI 226
Query: 188 TAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
+ D K L AL Y + M +G+ + TYN+L+ A A+ +E
Sbjct: 227 GGYC---DVGK-LDVALQYREDMVQRGIAM---TVATYNLLMHALFMDARASDAYAVLEE 279
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ ++ +PD++TYN +++ Y K G K+ V M + +T+ LI + ++
Sbjct: 280 MQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQ 339
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+ +++F + +P + +N++I ++ +A + +M + P +TY
Sbjct: 340 VQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNT 399
Query: 366 IITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+ M G+C + AR + DE++K G + + N ++ Y M G +A + + +
Sbjct: 400 L--MRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMD 457
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
G P TY L + K + + L+K M GI P+ ++ +E ++
Sbjct: 458 KGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTT 511
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 120/271 (44%), Gaps = 10/271 (3%)
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHE-SILAPDIY 256
A K + + ++ M R PN VTYN ++ CA+ R V + +E+ E +APD Y
Sbjct: 128 ATGKPVRALELLRQMPR--PNAVTYNTVIAGFCARGR-VQAALEVMREMRERGGIAPDKY 184
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKS-NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
TY ++ + K G +++ V M + + P + +N LI Y D Q +
Sbjct: 185 TYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYRED 244
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC-- 373
++ T+ T+N ++ A V ++M ++P TY +I GYC
Sbjct: 245 MVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILIN--GYCKE 302
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
N +A E+F+E+S+ G T +++ + G E D LF + G+ PD Y
Sbjct: 303 GNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMY 362
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L ++ E +++ ME+ I P+
Sbjct: 363 NALINSHCTGGDMERAYEIMAEMEKKRIPPD 393
>gi|410110075|gb|AFV61117.1| pentatricopeptide repeat-containing protein 123, partial
[Burroughsia fastigiata]
Length = 348
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 5/255 (1%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ +FS +++SG PD YN +I KAK +A +MK PN +Y
Sbjct: 6 AISIFSRLKSSGYXPDLVAYNTMIIVF----GKAKLFREARSLISEMK-TAGVTPNTTSY 60
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
+ LL + + + ++F E+ E D+ T N ++D YG+ GM KE + + M+
Sbjct: 61 STLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 120
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+P+++++N L+ YG + F + +F+ + + + T+NSMI+ YGK K
Sbjct: 121 MGIEPNVVSYNTLVRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEK 180
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A + Q+M + P+ ITY II+++G + RA +F +L G ++ M+
Sbjct: 181 ANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIV 240
Query: 404 AYCMNGLPTEADLLF 418
AY GL A L
Sbjct: 241 AYERAGLVAHAKRLL 255
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 148/331 (44%), Gaps = 15/331 (4%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K Y D Y+ +I V GK R A L SEM+ +G P+ + Y+ L+T ++
Sbjct: 14 KSSGYXPDLVAYNTMIIVFGKAKLFREARSLISEMKTAGVTPNTTSYSTLLTMYVEN--- 70
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
K +AL F +M+ + +C ++ T NI++ Q + + LF + + + P++
Sbjct: 71 -KKFLEALSVFSEMREI-KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVV 128
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+YN ++ YG + E + M+ + +++T+N +I YGK +K + + +
Sbjct: 129 SYNTLVRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEM 188
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P T++++I +GK +A +FQK+ + I ++ +I Y V
Sbjct: 189 QSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGLV 248
Query: 377 SRAREIFDELSK---LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ A+ + EL + + +D + L G EA +F + + G D + +
Sbjct: 249 AHAKRLLHELKRPDNIPRDTAIHILAGA-------GRIEEATYVFRQAIDAGEVKDITVF 301
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ + +K V ++ +M G P+
Sbjct: 302 ERMIHLLSKYKKYSNVVEVFDKMRGLGYFPD 332
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 129/263 (49%), Gaps = 1/263 (0%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+KA+ F ++K P++V YN ++ +A+ + +L E+ + + P+ +Y+
Sbjct: 4 SKAISIFSRLKS-SGYXPDLVAYNTMIIVFGKAKLFREARSLISEMKTAGVTPNTTSYST 62
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ Y +N E SV S M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 63 LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 122
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P + ++N+++ YG A L G+A ++F+ M + +TY +I +YG +A
Sbjct: 123 IEPNVVSYNTLVRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKAN 182
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ E+ G + T + ++ + G A +LF+ + G D ++ + AY
Sbjct: 183 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAY 242
Query: 441 TKANMKELVQKLLKRMEQNGIVP 463
+A + ++LL +++ +P
Sbjct: 243 ERAGLVAHAKRLLHELKRPDNIP 265
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 77/159 (48%)
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+ K +F L S P L +N+MII +GKA+L +A + +M TP+ +Y
Sbjct: 3 YSKAISIFSRLKSSGYXPDLVAYNTMIIVFGKAKLFREARSLISEMKTAGVTPNTTSYST 62
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
++TMY A +F E+ ++ + ++T N M++ Y G+ EAD LF MG
Sbjct: 63 LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 122
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ P+ +Y L + Y A + L + M++ I N
Sbjct: 123 IEPNVVSYNTLVRVYGDAELFGEAIHLFRLMQRKNIEQN 161
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 120/282 (42%), Gaps = 37/282 (13%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
++ K+L+ L VF M++ + + D + +I V G+ G + A LF MR G P+
Sbjct: 69 ENKKFLEALSVFSEMREIKCLL-DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 127
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
YN L+ + A+ +A+ F+ M+ + + N+VTYN ++ + ++ N
Sbjct: 128 VSYNTLVRVY----GDAELFGEAIHLFRLMQ-RKNIEQNVVTYNSMIMIYGKTLEHEKAN 182
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
L +E+ + P+ TY+ ++ +GK G + + +++S+ + D I F +I +Y
Sbjct: 183 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAY 242
Query: 301 --------GKRQAFD--------------------KMEQ---VFKSLMHSKEKPTLPTFN 329
KR + ++E+ VF+ + + E + F
Sbjct: 243 ERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFE 302
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
MI K + VF KM + Y P ++ YG
Sbjct: 303 RMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYG 344
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 86/189 (45%)
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
S+ SR+KS+ PD++ +N +I +GK + F + + + + P ++++++ Y
Sbjct: 8 SIFSRLKSSGYXPDLVAYNTMIIVFGKAKLFREARSLISEMKTAGVTPNTTSYSTLLTMY 67
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
+ + +A VF +M +K T +I +YG A ++F + K+G + V
Sbjct: 68 VENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 127
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+ N ++ Y L EA LF + + TY + Y K E L++
Sbjct: 128 VSYNTLVRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQE 187
Query: 456 MEQNGIVPN 464
M+ GI PN
Sbjct: 188 MQSRGIEPN 196
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS +I++ GK G+ A LF ++R+SG D ++ +I A+ ++A +A A
Sbjct: 200 YSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAY----ERAGLVAHAKRLL 255
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++K +P+ + + + A A +++ +F++ ++ DI + ++ K
Sbjct: 256 HELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSK 310
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
+ V +M+ PD +++++YGK Q
Sbjct: 311 YKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQ 347
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 147/330 (44%), Gaps = 10/330 (3%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
IY+ LI KKG+ A LF EM G + Y LI H K +
Sbjct: 200 IYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLI----HGLFKNGIKKQGFEM 255
Query: 207 FQKMKGMERCKPNIVTYNILL-RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
++KM+ PN+ TYN ++ + C R D +F E+ E ++ +I TYN ++
Sbjct: 256 YEKMQ-EHGVFPNLHTYNCVMNQLCKDGRTKDAFK-VFDEMRERGVSCNIVTYNTLIGGL 313
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ E V+ +MKS+ P++IT+N LID + + K + + L P+L
Sbjct: 314 CREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSL 373
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+N ++ + K A V ++M PS +TY +I + DN+ +A ++
Sbjct: 374 VTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSS 433
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ +LG V T + ++ +C+ G EA LF++ P+ Y + Y K
Sbjct: 434 MEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGS 493
Query: 446 KELVQKLLKRMEQNGIVPNK---RFFLEAL 472
+L + ME+ + PN R+ +E L
Sbjct: 494 SYRALRLFREMEEKELPPNVASYRYMIEVL 523
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 156/338 (46%), Gaps = 10/338 (2%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
Q E++ MQ+ + + Y+ ++ + K G+T+ A +F EMR G + YN L
Sbjct: 251 QGFEMYEKMQEHGVF-PNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTL 309
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I L KA + + +MK + PN++TYN L+ R + + +L ++L
Sbjct: 310 IGG-LCREMKANEANEVM---DQMKS-DGINPNLITYNTLIDGFCGVRKLGKALSLCRDL 364
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
L+P + TYN ++ + K G V+ M+ KP +T+ +LID++ +
Sbjct: 365 KSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNM 424
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+K Q+ S+ P + T++ +I + +A +F+ M K+ P+ + Y +
Sbjct: 425 EKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTM 484
Query: 367 ITMYGYCDNVS--RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
+ GYC S RA +F E+ + V++ M+E C EA+ L E +
Sbjct: 485 V--LGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDS 542
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
G+ P S L+ +A ++ + + ++ M +G++
Sbjct: 543 GIGPSDSILNLISRAKNDSHSRSMDEEEPASMVFDGLM 580
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 145/325 (44%), Gaps = 11/325 (3%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+A+ Y+ LI + K G + ++ +M+ G P+ YN ++ L + K
Sbjct: 230 VANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMN-QLCKDGRTK--- 285
Query: 202 KALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
A F +M+ ER NIVTYN L+ + ++ N + ++ + P++ TYN
Sbjct: 286 DAFKVFDEMR--ERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNT 343
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++D + + + S+ +KS P ++T+N+L+ + K+ +V K +
Sbjct: 344 LIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERG 403
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSR 378
KP+ T+ +I + ++ KA + M + TP TY +I +G+C ++
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLI--HGFCIKGRMNE 461
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A +F + + + N M+ YC G A LF + P+ ++Y+ + +
Sbjct: 462 ASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIE 521
Query: 439 AYTKANMKELVQKLLKRMEQNGIVP 463
K + + L+++M +GI P
Sbjct: 522 VLCKERKSKEAEGLVEKMIDSGIGP 546
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 146/317 (46%), Gaps = 10/317 (3%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
+++ F+EM + G P + +N L+T + + + + +F + K + ++ ++
Sbjct: 113 SIYYFNEMVDKGFVPGSNCFNNLLTFVV----GSSSFNQWWCFFNESK--IKVVLDVYSF 166
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
I+++ C +A +++ L EL E +P++ Y ++D K G I++ + + M
Sbjct: 167 GIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGK 226
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+ T+ +LI K + ++++ + P L T+N ++ K
Sbjct: 227 FGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKD 286
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNV--SRAREIFDELSKLGKDMKVSTLNAM 401
A VF +M + + +TY +I G C + + A E+ D++ G + + T N +
Sbjct: 287 AFKVFDEMRERGVSCNIVTYNTLIG--GLCREMKANEANEVMDQMKSDGINPNLITYNTL 344
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
++ +C +A L + + G++P TY +L + K K++K ME+ GI
Sbjct: 345 IDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGI 404
Query: 462 VPNKRFFLEALETFSSS 478
P+K + ++TF+ S
Sbjct: 405 KPSKVTYTILIDTFARS 421
>gi|302821471|ref|XP_002992398.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
gi|300139814|gb|EFJ06548.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
Length = 698
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 146/331 (44%), Gaps = 11/331 (3%)
Query: 142 IADTGI------YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRD 195
+ DTG+ Y LI + G L+ EMR+ RP+ +Y +IT + T
Sbjct: 343 LRDTGMSINKITYCLLIDAYARAGLMDRLEALYQEMRDCDIRPNTYMYARMITIYRDTGQ 402
Query: 196 KAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
K + K L Q+ P+ YN+++ + R ++Q F ++ + + PD+
Sbjct: 403 WQKGV-KLLREMQQAG----VTPDAHVYNVIINTFGRTRQLEQARIAFFKMQDGGIEPDV 457
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
++N ++DA K G E + +M ++ C P TFN++I G+ + ++ + ++ +
Sbjct: 458 VSWNSLIDACCKAGQPLEARKLYYKMVNDGCAPTAQTFNIVIHGLGEHKRWNDVNEMVEE 517
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
+ P + T+ +++ Y +ARL A Q M PS Y + Y
Sbjct: 518 MRSKGMFPNVVTYTTLVDVYAQARLFQDAVECLQTMKEDGMGPSPTAYSALANAYAQLGM 577
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+ + + K ++ ++ LN ++ A+ M G EA +FE G+T D TY
Sbjct: 578 CEQTLHVLQTMEKENIEINLAMLNLLINAFSMAGRSQEAFAVFEYIKEAGLTADKITYTT 637
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
L KA +A + V + M + G P+ +
Sbjct: 638 LMKALIRAEKLDEVSGVFDEMIKAGCRPDGK 668
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 146/328 (44%), Gaps = 15/328 (4%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH-----LHTRDK 196
+AD Y L+ +GK G+T A L EM+ G RP+ YN L+ + L D
Sbjct: 279 VADRDSYISLMLSLGKHGRTAEAEALLEEMKWYGLRPNLKAYNTLLGGYSRKGQLQQIDT 338
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
K L + G N +TY +L+ A A+A +D++ AL++E+ + + P+ Y
Sbjct: 339 VKTLLRDTG----------MSINKITYCLLIDAYARAGLMDRLEALYQEMRDCDIRPNTY 388
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
Y ++ Y G ++ +L M+ PD +N++I+++G+ + ++ F +
Sbjct: 389 MYARMITIYRDTGQWQKGVKLLREMQQAGVTPDAHVYNVIINTFGRTRQLEQARIAFFKM 448
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P + ++NS+I KA +A ++ KM P+ T+ +I G
Sbjct: 449 QDGGIEPDVVSWNSLIDACCKAGQPLEARKLYYKMVNDGCAPTAQTFNIVIHGLGEHKRW 508
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+ E+ +E+ G V T +++ Y L +A + G+ P + Y L
Sbjct: 509 NDVNEMVEEMRSKGMFPNVVTYTTLVDVYAQARLFQDAVECLQTMKEDGMGPSPTAYSAL 568
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPN 464
AY + M E +L+ ME+ I N
Sbjct: 569 ANAYAQLGMCEQTLHVLQTMEKENIEIN 596
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 135/298 (45%), Gaps = 5/298 (1%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
LF EM+ G + D VYN LI A +A + + + +K++ +++
Sbjct: 234 LFQEMQAEGVQVDGKVYNDLIFAC----GQAHKPNEGMFFLEKLQASGLVADRDSYISLM 289
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
L R + AL +E+ L P++ YN ++ Y + G ++++++V + ++
Sbjct: 290 LSLGKHGRTA-EAEALLEEMKWYGLRPNLKAYNTLLGGYSRKGQLQQIDTVKTLLRDTGM 348
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
+ IT+ LLID+Y + D++E +++ + +P + MI Y K
Sbjct: 349 SINKITYCLLIDAYARAGLMDRLEALYQEMRDCDIRPNTYMYARMITIYRDTGQWQKGVK 408
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+ ++M TP Y II +G + +AR F ++ G + V + N++++A C
Sbjct: 409 LLREMQQAGVTPDAHVYNVIINTFGRTRQLEQARIAFFKMQDGGIEPDVVSWNSLIDACC 468
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G P EA L+ N G P + T+ ++ + V ++++ M G+ PN
Sbjct: 469 KAGQPLEARKLYYKMVNDGCAPTAQTFNIVIHGLGEHKRWNDVNEMVEEMRSKGMFPN 526
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 90/209 (43%), Gaps = 3/209 (1%)
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS--YGKRQAFDKMEQVFKS 315
YN ++ AY +N + LS+MK+ PD++++ +I + +G + ++F+
Sbjct: 179 YNALVGAYAQNRDYGKALETLSKMKTLGFPPDVVSYTHVIQACRHGVVDIYTGF-RLFQE 237
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
+ + +N +I G+A + + +K+ A +Y ++ G
Sbjct: 238 MQAEGVQVDGKVYNDLIFACGQAHKPNEGMFFLEKLQASGLVADRDSYISLMLSLGKHGR 297
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+ A + +E+ G + N +L Y G + D + + G++ + TY L
Sbjct: 298 TAEAEALLEEMKWYGLRPNLKAYNTLLGGYSRKGQLQQIDTVKTLLRDTGMSINKITYCL 357
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L AY +A + + ++ L + M I PN
Sbjct: 358 LIDAYARAGLMDRLEALYQEMRDCDIRPN 386
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 85/206 (41%), Gaps = 6/206 (2%)
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
C+ + +++I YG+ + K +V + L + ++ +N+++ Y + R GKA
Sbjct: 140 CRTYDVLDSVVIHGYGRERKLHKALEVAEKLGSNLQRRG---YNALVGAYAQNRDYGKAL 196
Query: 346 YVFQKMTAMKYTPSFITYECIITM--YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
KM + + P ++Y +I +G D + R +F E+ G + N ++
Sbjct: 197 ETLSKMKTLGFPPDVVSYTHVIQACRHGVVDIYTGFR-LFQEMQAEGVQVDGKVYNDLIF 255
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
A P E E G+ D +Y L + K + LL+ M+ G+ P
Sbjct: 256 ACGQAHKPNEGMFFLEKLQASGLVADRDSYISLMLSLGKHGRTAEAEALLEEMKWYGLRP 315
Query: 464 NKRFFLEALETFSSSLAGSQSGSAKT 489
N + + L +S Q + KT
Sbjct: 316 NLKAYNTLLGGYSRKGQLQQIDTVKT 341
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 148/322 (45%), Gaps = 5/322 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ +I+ K + A + + M+ G PD YN +I + + R L A
Sbjct: 136 DVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRR----KLGLA 191
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L ++ ++ C P ++TY IL+ A +++ L +E+ L PD+YTYN ++
Sbjct: 192 LKVLDQLL-LDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIR 250
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K GM++ +++ + S CKPD+I++N+L+ ++ + +D+ E++ + +P
Sbjct: 251 GMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEP 310
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T++ +I + + +A V + M + TP +Y+ +I+ + A I
Sbjct: 311 NKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIM 370
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
D + G + N +L A C NG +A +F MG P+ S+Y + A
Sbjct: 371 DYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSC 430
Query: 444 NMKELVQKLLKRMEQNGIVPNK 465
+ ++ M G+ P++
Sbjct: 431 GDRSRALGMVPAMISKGVDPDE 452
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 145/323 (44%), Gaps = 13/323 (4%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DK 196
R + D Y+ +I M K+G A L + + + GC+PD YN L+ A L+ D+
Sbjct: 236 RGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDE 295
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+ L + F + C+PN VTY+IL+ + + +D+ ++ K + E L PD Y
Sbjct: 296 GEKLVAEM--FSR-----GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTY 348
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+Y+ ++ A K G + ++ M SN C PDI+ +N ++ + K ++ ++F L
Sbjct: 349 SYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL 408
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
P + ++N+MI + +A + M + P ITY +I+ V
Sbjct: 409 RGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLV 468
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
A + D++ + G V + N +L C +A +F G P+ +TY LL
Sbjct: 469 EEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILL 528
Query: 437 YKAYTKANMK----ELVQKLLKR 455
+ A + EL L R
Sbjct: 529 IEGIGFAGWRTEAMELANSLFSR 551
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 141/328 (42%), Gaps = 9/328 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALG 205
Y+ LI +G AM L EM G PD YNA+I ++A L +L
Sbjct: 210 YTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSL- 268
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
KG CKP++++YNILLRA D+ L E+ P+ TY+ ++ +
Sbjct: 269 ---TSKG---CKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSL 322
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ G I E SVL M + PD +++ LI + K D + ++ + P +
Sbjct: 323 CRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDI 382
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
+N+++ K +A +F K+ M P+ +Y +I+ C + SRA +
Sbjct: 383 VNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPA 442
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ G D T N+++ C +GL EA L ++ G P +Y ++ K
Sbjct: 443 MISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRR 502
Query: 446 KELVQKLLKRMEQNGIVPNKRFFLEALE 473
+ + M + G PN+ ++ +E
Sbjct: 503 IDDAIGMFAEMIEKGCRPNETTYILLIE 530
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 113/249 (45%), Gaps = 5/249 (2%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+++ L++ +N+++ + + E+ ES PD++ YN V+ + K I+ V
Sbjct: 101 PDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDVFAYNAVISGFCKVNRIEAATQV 159
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L+RMK+ PDI+T+N++I S R+ +V L+ PT+ T+ +I
Sbjct: 160 LNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIV 219
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKV 395
+A + ++M A P TY II G C V RA E+ L+ G V
Sbjct: 220 EGGINEAMKLLEEMLARGLLPDMYTYNAIIR--GMCKEGMVERAAELITSLTSKGCKPDV 277
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+ N +L A+ G E + L + G P+ TY +L + + + +LK
Sbjct: 278 ISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKV 337
Query: 456 MEQNGIVPN 464
M + + P+
Sbjct: 338 MIEKELTPD 346
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/316 (18%), Positives = 133/316 (42%), Gaps = 8/316 (2%)
Query: 150 KLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQK 209
KL+ K G+ +++ + N G PD + LI + ++ KA +
Sbjct: 73 KLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKA-------SRV 125
Query: 210 MKGME-RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
M+ +E +P++ YN ++ + ++ + + PDI TYN ++ +
Sbjct: 126 MEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNR 185
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
+ VL ++ + C P +IT+ +LI++ ++ ++ + ++ P + T+
Sbjct: 186 RKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTY 245
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
N++I K + +A + +T+ P I+Y ++ + ++ E+
Sbjct: 246 NAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFS 305
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
G + T + ++ + C G EA + + +TPD+ +Y L A K +L
Sbjct: 306 RGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDL 365
Query: 449 VQKLLKRMEQNGIVPN 464
++ M NG +P+
Sbjct: 366 AIGIMDYMISNGCLPD 381
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 92/213 (43%), Gaps = 1/213 (0%)
Query: 253 PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
PD+ ++ + I++ V+ ++S+ +PD+ +N +I + K + QV
Sbjct: 101 PDVILCTKLIKGFFNFKNIEKASRVMEILESHT-EPDVFAYNAVISGFCKVNRIEAATQV 159
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGY 372
+ P + T+N MI + R G A V ++ P+ ITY +I
Sbjct: 160 LNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIV 219
Query: 373 CDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
++ A ++ +E+ G + T NA++ C G+ A L + + G PD +
Sbjct: 220 EGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVIS 279
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
Y +L +A+ + +KL+ M G PNK
Sbjct: 280 YNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 312
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 164/385 (42%), Gaps = 42/385 (10%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E++ M + DT YS L++ K G+ A+ LF EM+ +G P +Y L+
Sbjct: 187 ELYHEMCNEGDCFPDTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAI 246
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ + D+ KALG Q+MK + C P + TY L++ ++ V+ ++F + +
Sbjct: 247 YFKSGDE-----KALGLVQEMKD-KGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKD 300
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF---------------- 293
PD+ N +++ +GK G +++ + +M+S +C P+++T+
Sbjct: 301 GCKPDVVLINNLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASE 360
Query: 294 --------------------NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
++LID + K +K + + + P + S+I
Sbjct: 361 AASWFEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIN 420
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
GKA+ A +F ++ S Y +I G C S A ++F+E+ K+G +
Sbjct: 421 ALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNP 480
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
V NA++ G+ EA G TPD +++ ++ + E ++
Sbjct: 481 DVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMF 540
Query: 454 KRMEQNGIVPNKRFFLEALETFSSS 478
+M+ + I P+ + L + S S
Sbjct: 541 MKMKDSLIKPDAVSYNTILGSLSRS 565
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 159/390 (40%), Gaps = 82/390 (21%)
Query: 149 SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQ 208
S+++ ++GK A+ +F ++++ C+P S YN++I + K +
Sbjct: 135 SEVVKILGKAKMVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHE----LYH 190
Query: 209 KMKGMERCKPNIVTYNILLRACAQ-------ARNVDQVNA-------------------- 241
+M C P+ +TY++L+ A + R D++ A
Sbjct: 191 EMCNEGDCFPDTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKS 250
Query: 242 -------LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
L +E+ + AP ++TY ++ GK+G +++ SV M + CKPD++ N
Sbjct: 251 GDEKALGLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLIN 310
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV-----FQ 349
LI+ +GK + ++F + K P + T+N++I KA + KA F+
Sbjct: 311 NLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVI----KALFESKAPASEAASWFE 366
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK----------------LGKDM 393
KM A TPS TY +I + + V +A + +E+ + LGK
Sbjct: 367 KMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAK 426
Query: 394 KVSTLN-------------------AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
+ N M++ G P+EA LF +G PD Y
Sbjct: 427 RYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYN 486
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L +A M E L+ ME+NG P+
Sbjct: 487 ALMSGLVRAGMIEEAFSALRTMEENGCTPD 516
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 146/314 (46%), Gaps = 6/314 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y++LI +GK G+ A +F M GC+PD + N LI KA L AL F
Sbjct: 274 YTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIF----GKAGRLEDALKLF 329
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARN-VDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+M+ + +C PN+VTYN +++A +++ + + F+++ + + P +TY+ ++D +
Sbjct: 330 DQMRSL-KCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFC 388
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K +++ +L M P + LI++ GK + ++ ++F L + + +
Sbjct: 389 KTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSAR 448
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
+ MI N GK +A +F +M + P Y +++ + A +
Sbjct: 449 IYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTM 508
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
+ G +++ N +L G P +A +F + + PD+ +Y + + +++ M
Sbjct: 509 EENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMF 568
Query: 447 ELVQKLLKRMEQNG 460
E KL++ M G
Sbjct: 569 EEAAKLMREMGSRG 582
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 135/330 (40%), Gaps = 75/330 (22%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + LGKS + VF M K D + + LI + GK G+ A+ LF +MR+
Sbjct: 277 LIKGLGKSGRVEDAYSVFLNMLKDGCK-PDVVLINNLINIFGKAGRLEDALKLFDQMRSL 335
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNI--------- 225
C P+ YN +I A ++ A ++A +F+KMK P+ TY+I
Sbjct: 336 KCAPNVVTYNTVIKALFESKAPA---SEAASWFEKMKA-NGVTPSSFTYSILIDGFCKTN 391
Query: 226 --------------------------LLRACAQARNVDQVNALFKELHES-------ILA 252
L+ A +A+ + N LF EL E+ I A
Sbjct: 392 RVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYA 451
Query: 253 ----------------------------PDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
PD+Y YN +M + GMI+E S L M+ N
Sbjct: 452 VMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEEN 511
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
C PD+ + N++++ + ++ ++F + S KP ++N+++ + ++ + +A
Sbjct: 512 GCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEA 571
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCD 374
+ ++M + + ITY I+ G D
Sbjct: 572 AKLMREMGSRGFEYDHITYSSILEAVGKVD 601
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 72/191 (37%), Gaps = 35/191 (18%)
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY-GKARLQGKAEYV 347
D+ T+ LI F +M ++ + ++ S P S ++ GKA++ KA V
Sbjct: 94 DLTTYMPLIRCLDDCGLFGEMWKMIQEMVRSPTCVIGPADLSEVVKILGKAKMVNKALSV 153
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F ++ + K P+ TY +I M + + E++ E+ E C
Sbjct: 154 FYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCN--------------EGDCF 199
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
PD+ TY +L A+ K + +L M+ NG+ P +
Sbjct: 200 --------------------PDTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKI 239
Query: 468 FLEALETFSSS 478
+ L + S
Sbjct: 240 YTTLLAIYFKS 250
>gi|357441367|ref|XP_003590961.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480009|gb|AES61212.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 573
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 158/333 (47%), Gaps = 23/333 (6%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI---TAHLHTRDKAKALAKAL 204
Y+ L+ ++ K A+ + +M GC PD ++YN+L+ + + +D A ++ L
Sbjct: 253 YALLVELVCKHCGASRALEVLEDMAREGCCPDINMYNSLVNFSSKQGNYKDTALVISNLL 312
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
+ GM+ PN+VTYNIL+ + + D V+ + K ++E+ ++P + TYN ++++
Sbjct: 313 SH-----GMQ---PNVVTYNILIHSLSLHGYSDVVDDILKIMNETSISPTLVTYNILLNS 364
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
K+G + S+ +M S C PDI+T+N L+++ K D+ Q+ SL + P
Sbjct: 365 LCKSGFLDRSISLYIKMVSENCSPDIVTYNTLLNALCKEGFIDESIQLLHSLSGTNCSPG 424
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRAREI 382
L T+N +I + R A+ ++ +M P +IT+ ++ +G C A EI
Sbjct: 425 LVTYNIVINGLARMRSIKSAKEMYGEMVEKGIDPDYITHRTLV--WGLCQVYQFEEAVEI 482
Query: 383 FDELSKLGKDMKVSTLNAMLEAYC----MNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
F + ++G+ +K ++ C ++ DL+ + PD Y L K
Sbjct: 483 FKVMHRIGQKIKGYAYKCVILGLCEQKKLDSAIQALDLMVKAQ----CKPDGKIYYTLLK 538
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
+ M L +R+ + I+ + + A
Sbjct: 539 SVANEGMVNEANDLHQRLIELKILKDGCLIVGA 571
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/367 (18%), Positives = 145/367 (39%), Gaps = 32/367 (8%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ DT ++ +I + K+G + A+ M SGC PD YN +I D A++
Sbjct: 177 VPDTITFNAVIGSLCKRGHLKSALEFLEGMSLSGCLPDAKTYNTIIRCIFDKGDPNLAVS 236
Query: 202 -------------------------------KALGYFQKMKGMERCKPNIVTYNILLRAC 230
+AL + M E C P+I YN L+
Sbjct: 237 FWKDQLRKGFPPYLITYALLVELVCKHCGASRALEVLEDM-AREGCCPDINMYNSLVNFS 295
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
++ N + L + P++ TYN ++ + +G ++ +L M P +
Sbjct: 296 SKQGNYKDTALVISNLLSHGMQPNVVTYNILIHSLSLHGYSDVVDDILKIMNETSISPTL 355
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
+T+N+L++S K D+ ++ ++ P + T+N+++ K ++ +
Sbjct: 356 VTYNILLNSLCKSGFLDRSISLYIKMVSENCSPDIVTYNTLLNALCKEGFIDESIQLLHS 415
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
++ +P +TY +I ++ A+E++ E+ + G D T ++ C
Sbjct: 416 LSGTNCSPGLVTYNIVINGLARMRSIKSAKEMYGEMVEKGIDPDYITHRTLVWGLCQVYQ 475
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
EA +F+ H +G YK + + + + L M + P+ + +
Sbjct: 476 FEEAVEIFKVMHRIGQKIKGYAYKCVILGLCEQKKLDSAIQALDLMVKAQCKPDGKIYYT 535
Query: 471 ALETFSS 477
L++ ++
Sbjct: 536 LLKSVAN 542
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 138/345 (40%), Gaps = 9/345 (2%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
GK + +EV M + + + T + LI + GQ + + M SG PD
Sbjct: 124 GKLTAAARLVEVMARMSQIPHFPSCTNLIRGLIRI----GQVDKGCKIMNMMVMSGGVPD 179
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQV 239
+NA+I + K L AL + + M + C P+ TYN ++R + +
Sbjct: 180 TITFNAVIGSLC----KRGHLKSALEFLEGMS-LSGCLPDAKTYNTIIRCIFDKGDPNLA 234
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
+ +K+ P + TY +++ K+ VL M C PDI +N L++
Sbjct: 235 VSFWKDQLRKGFPPYLITYALLVELVCKHCGASRALEVLEDMAREGCCPDINMYNSLVNF 294
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
K+ + V +L+ +P + T+N +I + + + + M +P+
Sbjct: 295 SSKQGNYKDTALVISNLLSHGMQPNVVTYNILIHSLSLHGYSDVVDDILKIMNETSISPT 354
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
+TY ++ + R+ ++ ++ + T N +L A C G E+ L
Sbjct: 355 LVTYNILLNSLCKSGFLDRSISLYIKMVSENCSPDIVTYNTLLNALCKEGFIDESIQLLH 414
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ +P TY ++ + + +++ M + GI P+
Sbjct: 415 SLSGTNCSPGLVTYNIVINGLARMRSIKSAKEMYGEMVEKGIDPD 459
>gi|410110147|gb|AFV61153.1| pentatricopeptide repeat-containing protein 123, partial [Phyla
nodiflora]
Length = 419
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 133/283 (46%), Gaps = 7/283 (2%)
Query: 134 WMQKQRW--YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
W+QK D + S LI + K A+ +FS ++ SG PD YNA+I
Sbjct: 16 WLQKMEXDXVPGDLVLXSNLIELSRKLCDYSKAISIFSRLKXSGXXPDLXAYNAMINVF- 74
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KAK +A +MK P +Y+ LL + + ++F E+ E
Sbjct: 75 ---GKAKLFREARSLIXEMK-TAGVMPXTTSYSTLLTMYVENXKFLEALSVFSEMREXKC 130
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
D+ T N ++D YG+ GM KE + + M+ +P+++++N L+ YG + F +
Sbjct: 131 LXDLXTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 190
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+F+ + + + T+NSMI+ YGK KA + Q+M + P+ ITY II+++G
Sbjct: 191 LFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWG 250
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ RA +F +L G ++ M+ AY GL A
Sbjct: 251 KVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHA 293
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 144/312 (46%), Gaps = 5/312 (1%)
Query: 152 IAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK 211
I GK+G A+ +M D + + LI D +KA++ F ++K
Sbjct: 1 ITHFGKEGLFDXALSWLQKMEXDXVPGDLVLXSNLIELSRKLCDYSKAIS----IFSRLK 56
Query: 212 GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMI 271
P++ YN ++ +A+ + +L E+ + + P +Y+ ++ Y +N
Sbjct: 57 -XSGXXPDLXAYNAMINVFGKAKLFREARSLIXEMKTAGVMPXTTSYSTLLTMYVENXKF 115
Query: 272 KEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM 331
E SV S M+ +C D+ T N++ID YG+ + +++F + +P + ++N++
Sbjct: 116 LEALSVFSEMREXKCLXDLXTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTL 175
Query: 332 IINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGK 391
+ YG A L G+A ++F+ M + +TY +I +YG +A + E+ G
Sbjct: 176 LRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGI 235
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
+ T + ++ + G A +LF+ + GV D ++ + AY +A + ++
Sbjct: 236 EPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKR 295
Query: 452 LLKRMEQNGIVP 463
LL +++ +P
Sbjct: 296 LLHELKRPDNIP 307
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 144/336 (42%), Gaps = 15/336 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ +I V GK R A L EM+ +G P + Y+ L+T ++ +A
Sbjct: 63 DLXAYNAMINVFGKAKLFREARSLIXEMKTAGVMPXTTSYSTLLTMYVEN----XKFLEA 118
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L F +M+ +C ++ T NI++ Q + + LF + + + P++ +YN ++
Sbjct: 119 LSVFSEMREX-KCLXDLXTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLR 177
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
YG + E + M+ + +++T+N +I YGK +K + + + +P
Sbjct: 178 VYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEP 237
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T++++I +GK +A +FQK+ + I ++ +I Y V+ A+ +
Sbjct: 238 NSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLL 297
Query: 384 DELSK---LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
EL + + +D + L G EA +F + + G D + ++ +
Sbjct: 298 HELKRPDNIPRDTAIHILAG-------AGRIEEATYVFRQAIDSGEVKDITVFERMIHLL 350
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+K V ++ +M G P+ L +
Sbjct: 351 SKYKKYMNVVEVFDKMRGLGYFPDSNVIAVVLNAYG 386
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 123/266 (46%), Gaps = 1/266 (0%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
AL + QKM+ + ++V + L+ + + + ++F L S PD+ YN ++
Sbjct: 13 ALSWLQKME-XDXVPGDLVLXSNLIELSRKLCDYSKAISIFSRLKXSGXXPDLXAYNAMI 71
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+ +GK + +E S++ MK+ P +++ L+ Y + F + VF + K
Sbjct: 72 NVFGKAKLFREARSLIXEMKTAGVMPXTTSYSTLLTMYVENXKFLEALSVFSEMREXKCL 131
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
L T N MI YG+ + +A+ +F M M P+ ++Y ++ +YG + A +
Sbjct: 132 XDLXTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHL 191
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
F + + + V T N+M+ Y +A+ L + + G+ P+S TY + + K
Sbjct: 192 FRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGK 251
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFF 468
+ L +++ +G+ ++ F
Sbjct: 252 VGKLDRAAMLFQKLRSSGVEIDQILF 277
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%)
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+GK G+ S L +M+ + D++ + LI+ K + K +F L S P
Sbjct: 4 FGKEGLFDXALSWLQKMEXDXVPGDLVLXSNLIELSRKLCDYSKAISIFSRLKXSGXXPD 63
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
L +N+MI +GKA+L +A + +M P +Y ++TMY A +F
Sbjct: 64 LXAYNAMINVFGKAKLFREARSLIXEMKTAGVMPXTTSYSTLLTMYVENXKFLEALSVFS 123
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E+ + + T N M++ Y G+ EAD LF MG+ P+ +Y L + Y A
Sbjct: 124 EMREXKCLXDLXTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAE 183
Query: 445 MKELVQKLLKRMEQNGIVPN 464
+ L + M++ I N
Sbjct: 184 LFGEAIHLFRLMQRKNIEQN 203
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 127/298 (42%), Gaps = 37/298 (12%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
K+L+ L VF M++ + + D + +I V G+ G + A LF MR G P+ Y
Sbjct: 114 KFLEALSVFSEMREXKC-LXDLXTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSY 172
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
N L L A+ +A+ F+ M+ + + N+VTYN ++ + ++ N L
Sbjct: 173 NTL----LRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVTYNSMIMIYGKTLEHEKANNLI 227
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY--- 300
+E+ + P+ TY+ ++ +GK G + + +++S+ + D I F +I +Y
Sbjct: 228 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERA 287
Query: 301 -----GKRQAFD--------------------KMEQ---VFKSLMHSKEKPTLPTFNSMI 332
KR + ++E+ VF+ + S E + F MI
Sbjct: 288 GLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDSGEVKDITVFERMI 347
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
K + VF KM + Y P ++ YG +A +I+ E+ ++G
Sbjct: 348 HLLSKYKKYMNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLHEFDKASDIYMEMQEVG 405
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 163/357 (45%), Gaps = 50/357 (14%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y ++ + K+G LA L ++M + D ++N +I + K + + AL F
Sbjct: 153 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC----KYRHVDDALNLF 208
Query: 208 QKM--KGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
++M KG+ +PN+VTY+ L+ C+ R D + L ++ E + P++ T+N ++DA
Sbjct: 209 KEMETKGI---RPNVVTYSSLISCLCSYGRWSD-ASQLLSDMIEKKINPNLVTFNALIDA 264
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ K G E E + M PDI T+N LI+ + DK +Q+F+ ++ P
Sbjct: 265 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 324
Query: 325 LPTFNSMIINYGKAR---------------------------LQG--------KAEYVFQ 349
L T+N++I + K++ +QG A+ VF+
Sbjct: 325 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 384
Query: 350 KMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
+M + P +TY I + G C+N + +A E+FD + K + + M+E C
Sbjct: 385 QMVSDGVPPDIMTYS--ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 442
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G + LF + GV P+ TY + + + LLK+M+++G +P+
Sbjct: 443 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPD 499
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 148/307 (48%), Gaps = 17/307 (5%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVT 222
A+ L +M G RPD + LI L +KA ++A+ +M ++R C+PN+VT
Sbjct: 99 AVALVDQMVEMGYRPDTITFTTLIHG-LFLHNKA---SEAVALVDRM--VQRGCQPNLVT 152
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y +++ + ++D L ++ + + D+ +N ++D+ K + + ++ M+
Sbjct: 153 YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEME 212
Query: 283 SNQCKPDIITFNLLID---SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
+ +P+++T++ LI SYG+ + Q+ ++ K P L TFN++I + K
Sbjct: 213 TKGIRPNVVTYSSLISCLCSYGR---WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 269
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM--KVST 397
+AE + M P TY +I + D + +A+++F+ + + KD + T
Sbjct: 270 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM--VSKDCFPDLDT 327
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
N +++ +C + + LF + G+ D+ TY L + + QK+ K+M
Sbjct: 328 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 387
Query: 458 QNGIVPN 464
+G+ P+
Sbjct: 388 SDGVPPD 394
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 153/349 (43%), Gaps = 9/349 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++KL++ + K + L + L +M+ G + YN LI + ALA LG
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA-LLGKM 71
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K+ G E P+IVT + LL + + AL ++ E PD T+ ++
Sbjct: 72 MKL-GYE---PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ E +++ RM C+P+++T+ ++++ KR D + + +K + +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
FN++I + K R A +F++M P+ +TY +I+ S A ++ ++
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ + + T NA+++A+ G EA+ L ++ + PD TY L + + +
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTRSLS 496
+++ + M P+ L+ T S+ T+L R +S
Sbjct: 308 KAKQMFEFMVSKDCFPD----LDTYNTLIKGFCKSKRVEDGTELFREMS 352
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 129/311 (41%), Gaps = 44/311 (14%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH-LHTR-DKAKALAKALG 205
++ LI K+G+ A L +M PD YN+LI +H R DKAK +
Sbjct: 258 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM----- 312
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
F+ M + C P++ TYN L++ +++ V+ LF+E+ L D TY ++
Sbjct: 313 -FEFMVSKD-CFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 370
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+G + V +M S+ PDI+T+++L+D +K +VF + S+ K +
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
+ +MI KA GK V ++F
Sbjct: 431 YIYTTMIEGMCKA---GK--------------------------------VDDGWDLFCS 455
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
LS G V T N M+ C L EA L + G PDS TY L +A+ +
Sbjct: 456 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 515
Query: 446 KELVQKLLKRM 456
K +L++ M
Sbjct: 516 KAASAELIREM 526
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 111/260 (42%), Gaps = 4/260 (1%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+I +N LL A A+ + D V +L +++ ++ ++YTYN +++ + + I ++
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L +M +P I+T + L++ Y + + ++ +P TF ++I
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKV 395
+A + +M P+ +TY ++ G C ++ A + +++ + V
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVN--GLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
N ++++ C +A LF+ G+ P+ TY L +LL
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 456 MEQNGIVPNKRFFLEALETF 475
M + I PN F ++ F
Sbjct: 246 MIEKKINPNLVTFNALIDAF 265
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 6/171 (3%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E+FR M R + DT Y+ LI + G A +F +M + G PD Y+ L+
Sbjct: 346 ELFREMS-HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 404
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ KAL + Y QK K +I Y ++ +A VD LF L
Sbjct: 405 LCNNGKLEKAL-EVFDYMQK----SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 459
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
+ P++ TYN ++ +++E ++L +MK + PD T+N LI ++
Sbjct: 460 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAH 510
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 66/149 (44%)
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
++ S+ P++ FN ++ K + + +KM + + + TY +I +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+S A + ++ KLG + + TL+++L YC ++A L + MG PD+ T+
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L N L+ RM Q G PN
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPN 149
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L + K + LEVF +MQK + D IY+ +I M K G+ LF +
Sbjct: 400 ILLDGLCNNGKLEKALEVFDYMQKSEIKL-DIYIYTTMIEGMCKAGKVDDGWDLFCSLSL 458
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA 229
G +P+ YN +I+ R L +A +KMK + P+ TYN L+RA
Sbjct: 459 KGVKPNVVTYNTMISGLCSKR----LLQEAYALLKKMKE-DGPLPDSGTYNTLIRA 509
>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 627
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 147/332 (44%), Gaps = 14/332 (4%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG--CRPDPSVYNALITAHLHTRDK 196
R I D Y+ L+ + + +++ A+ L M + G C PD Y+ +I D
Sbjct: 45 RRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDL 104
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
K L +R PN+VTYN ++ A +A+ VD+ + + +S + PD
Sbjct: 105 DKMLD------------QRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCM 152
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TYN ++ + +G KE L +M+S+ +PD++T+N L+D K + ++F S+
Sbjct: 153 TYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSM 212
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
KP + T+ +++ Y + + M P+ + ++ Y + V
Sbjct: 213 TKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKV 272
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
A +F ++ + G + T +++ C +G +A L FE + G+ PDS Y L
Sbjct: 273 EEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSL 332
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+ + E ++L M GI + FF
Sbjct: 333 IHSLCIFDKWEKAEELFLEMLDRGICLSTIFF 364
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 129/285 (45%), Gaps = 5/285 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +IA + K AM + + M SG PD YN+++ + +A+ +
Sbjct: 119 YNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIV----FL 174
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+KM+ + +P++VTYN L+ + + +F + + L PDI TY ++ Y
Sbjct: 175 KKMRS-DGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYAT 233
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + EM +L M N P+ F++L+ +Y K++ ++ VF + P T
Sbjct: 234 KGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVT 293
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ ++I K+ A F++M P I Y +I D +A E+F E+
Sbjct: 294 YGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEML 353
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
G + N++++++C G E+ LF+ +GV PD T
Sbjct: 354 DRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT 398
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 134/317 (42%), Gaps = 25/317 (7%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
++S L+ K+ + AM +FS+MR G P+ Y +I K+ + A+ Y
Sbjct: 258 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLC----KSGRVEDAMLY 313
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F++M E +P+ + YN L+ + ++ LF E+ + + +N ++D++
Sbjct: 314 FEQMID-EGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHC 372
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA-FDKMEQVFKSLMHSKEKPTL 325
K G + E + M KPDIIT + S + + F + +F ++ ++ +K
Sbjct: 373 KEGRVIESGKLFDLMVRIGVKPDIITLGRFLGSARRDYSLFVNIYFIFTNMSNTGDKEKE 432
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIF 383
N+ N G P TY I ++G C N A +F
Sbjct: 433 TPVNTNGGNTASNSSGG---------------PFLGTYN--IILHGLCKNKLTDDALRMF 475
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
L + ++ T N M++A G EA LF + G+ P+ TY+L+ +
Sbjct: 476 QNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQ 535
Query: 444 NMKELVQKLLKRMEQNG 460
+ E + +L ME NG
Sbjct: 536 GLLEELDQLFLSMEDNG 552
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 143/327 (43%), Gaps = 9/327 (2%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ D Y+ LI K+G LA+ + +MRN GC+P+ Y L+ K +
Sbjct: 386 VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFC----KLGKID 441
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+A +M + KPN V +N L+ A + + + +F+E+ PD+YT+N +
Sbjct: 442 EAYNVLNEMSA-DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSL 500
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ + IK +L M S + +T+N LI+++ +R + ++ ++
Sbjct: 501 ISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRA 379
T+NS+I +A KA +F+KM + PS I+ C I + G C + V A
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNIS--CNILINGLCRSGMVEEA 618
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
E E+ G + T N+++ C G + +F G+ PD+ T+ L
Sbjct: 619 VEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSW 678
Query: 440 YTKANMKELVQKLLKRMEQNGIVPNKR 466
K LL ++G VPN R
Sbjct: 679 LCKGGFVYDACLLLDEGIEDGFVPNHR 705
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 147/364 (40%), Gaps = 30/364 (8%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L + R M K + ++ IY LI + K + A+ L EM GC PD +N +I
Sbjct: 237 LSLLRDMTKHGC-VPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVIL 295
Query: 189 AHLHTRDKAKALAKALG-------------YFQKMKGMERC--------------KPNIV 221
L D+ AK + Y M G+ + KP IV
Sbjct: 296 G-LCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIV 354
Query: 222 TYNILLRACAQARNVDQVNALFKELHESI-LAPDIYTYNGVMDAYGKNGMIKEMESVLSR 280
+N L+ +D A+ ++ S + PD+ TYN ++ Y K G++ VL
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
M++ CKP++ ++ +L+D + K D+ V + KP FN +I + K
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
+A +F++M P T+ +I+ D + A + ++ G T N
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
++ A+ G EA L G D TY L K +A + + L ++M ++G
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 461 IVPN 464
P+
Sbjct: 595 HAPS 598
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 147/340 (43%), Gaps = 15/340 (4%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
+E+F W Q Y +Y LI +G G+ + L +M++ G S++ +++
Sbjct: 95 MELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMR 154
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA-LFKELH 247
+ DKA + +M+ + C+P +YN++L N +V A +F ++
Sbjct: 155 DY----DKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSG-NCHKVAANVFYDML 209
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
+ P ++T+ VM A+ I S+L M + C P+ + + LI S K +
Sbjct: 210 SRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVN 269
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
+ Q+ + + P TFN +I+ K +A + +M + P ITY +
Sbjct: 270 EALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYL- 328
Query: 368 TMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD-LLFENSHNM 424
M G C V A+++F + K ++ N ++ + +G +A +L + +
Sbjct: 329 -MNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G+ PD TY L Y K + L ++L M G PN
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPN 423
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 132/297 (44%), Gaps = 11/297 (3%)
Query: 147 IYSKLIAVMG--KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKAL 204
+YS I V G K G+ A + +EM G +P+ +N LI+A K + +A+
Sbjct: 424 VYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC----KEHRIPEAV 479
Query: 205 GYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
F++M KG CKP++ T+N L+ + + L +++ + + TYN ++
Sbjct: 480 EIFREMPRKG---CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 536
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+A+ + G IKE +++ M D IT+N LI + DK +F+ ++
Sbjct: 537 NAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHA 596
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P+ + N +I ++ + +A ++M TP +T+ +I + +
Sbjct: 597 PSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTM 656
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
F +L G T N ++ C G +A LL + G P+ T+ +L ++
Sbjct: 657 FRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 30/197 (15%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKA 199
+A+T Y+ LI ++G+ + A L +EM G D YN+LI DKA++
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARS 585
Query: 200 LAKAL---GY-------------------------FQKMKGMERCKPNIVTYNILLRACA 231
L + + G+ FQK + P+IVT+N L+
Sbjct: 586 LFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLC 645
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+A ++ +F++L + PD T+N +M K G + + +L + P+
Sbjct: 646 RAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHR 705
Query: 292 TFNLLIDSYGKRQAFDK 308
T+++L+ S ++ D+
Sbjct: 706 TWSILLQSIIPQETLDR 722
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 18/196 (9%)
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL---PTFNSMIINYGKARLQGKAEYVF 348
+ +LI G F ++++ L+ K++ + F S++ +Y KA G+ +
Sbjct: 113 VYQVLIGKLGANGEFKTIDRL---LIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLM 169
Query: 349 QKM-TAMKYTPSFITYECI--ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+M P+F +Y + I + G C V+ A +D LS+ + T +++A+
Sbjct: 170 LEMRNVYSCEPTFKSYNVVLEILVSGNCHKVA-ANVFYDMLSR-KIPPTLFTFGVVMKAF 227
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
C A L + G P+S Y+ L + +K N +LL+ M G VP+
Sbjct: 228 CAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDA 287
Query: 466 RFFLEALETFSSSLAG 481
ETF+ + G
Sbjct: 288 -------ETFNDVILG 296
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 187/433 (43%), Gaps = 47/433 (10%)
Query: 42 FTHRHIPLSLRTRPRTGICCVWTRPRSKRGRKSE------ELESKELVRVLMRSFSDKEP 95
F H H +L P C + K GR E EL+ K LV D
Sbjct: 512 FRHLH---ALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLV-------PDVFT 561
Query: 96 LVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVM 155
++ + K E F L +E+ CL + + IY+ L+ +
Sbjct: 562 YSSLISGFCKQGEVEKAFELHDEM--------CL---------KGIAPNIFIYNALVDGL 604
Query: 156 GKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGM 213
K G + A LF M G PD Y+ +I + K++ +A+A F +M KG+
Sbjct: 605 CKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC----KSENVAEAFSLFHEMPSKGV 660
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
+ P+ YN L+ C + ++++ LF+E+ + A + ++N ++D Y K+ I+E
Sbjct: 661 Q---PHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQE 716
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
+ M + Q PD +T+ +ID + K ++ +FK + T+ S++
Sbjct: 717 ASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMY 776
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGK 391
Y K + +F+KM A P +TY +I Y +C DN+ A ++ DE+ G
Sbjct: 777 GYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVI--YAHCKEDNLVEAFKLRDEVVGKGM 834
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
K + + ++ A C TEA L + +G+ P + L +++ +A + +
Sbjct: 835 LTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATR 894
Query: 452 LLKRMEQNGIVPN 464
+ + ++ G+VP+
Sbjct: 895 VFEGVKSLGLVPD 907
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 147/347 (42%), Gaps = 46/347 (13%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
K+ ++ L +FR + + D S I + K G+ + A+ +FSE++ G PD
Sbjct: 501 KAGNLMEALSIFRHLHA-LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 559
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQ 238
Y++LI+ K + KA +M KG+ PNI YN L+ ++ ++ +
Sbjct: 560 FTYSSLISGFC----KQGEVEKAFELHDEMCLKGI---APNIFIYNALVDGLCKSGDIQR 612
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
LF + E L PD TY+ ++D Y K+ + E S+ M S +P +N L+
Sbjct: 613 ARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVH 672
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
K +K +F+ ++ TL +FN++I Y K+ +A +FQ+M A + P
Sbjct: 673 GCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMP 731
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+TY +I + +C G EA+LLF
Sbjct: 732 DHVTYTTVI-----------------------------------DWHCKAGKMEEANLLF 756
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+ + D+ TY L Y K V L ++M G+ P++
Sbjct: 757 KEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDE 803
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 132/306 (43%), Gaps = 15/306 (4%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ L EM P Y A+I H +D L+ A +KM KPN+V Y
Sbjct: 333 ALELLDEMEKRNLVPSAVSYGAMINGLCHCKD----LSLANKLLEKMT-FSGLKPNVVVY 387
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
+ L+ A +++ L + S +APDI+ YN ++ K G ++E + L ++
Sbjct: 388 STLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQG 447
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
KPD +TF I Y K + + F ++ P P + +I + KA +
Sbjct: 448 RGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLME 507
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAM 401
A +F+ + A+ P T C ++G N V A ++F EL + G V T +++
Sbjct: 508 ALSIFRHLHALGVLPDVQT--CSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL 565
Query: 402 LEAYCMNGLPTEADLLFENSHNM---GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
+ +C G E + FE M G+ P+ Y L K+ + +KL M +
Sbjct: 566 ISGFCKQG---EVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE 622
Query: 459 NGIVPN 464
G+ P+
Sbjct: 623 KGLEPD 628
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 129/319 (40%), Gaps = 9/319 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + K G+ A + M GC+P+ + LI + + +AL
Sbjct: 282 YNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRAL------- 334
Query: 208 QKMKGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+ + ME+ P+ V+Y ++ +++ N L +++ S L P++ Y+ ++ Y
Sbjct: 335 ELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGY 394
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
G I+E +L M + PDI +N +I K ++ + KP
Sbjct: 395 ASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDA 454
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
TF + I+ Y K +A F +M P+ Y +I + N+ A IF
Sbjct: 455 VTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRH 514
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
L LG V T +A + NG EA +F G+ PD TY L + K
Sbjct: 515 LHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGE 574
Query: 446 KELVQKLLKRMEQNGIVPN 464
E +L M GI PN
Sbjct: 575 VEKAFELHDEMCLKGIAPN 593
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 137/324 (42%), Gaps = 11/324 (3%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+YS LI +G+ A L M SG PD YNA+I+ KA + +A Y
Sbjct: 386 VYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISC----LSKAGKMEEASTY 441
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+++G KP+ VT+ + ++ + + F E+ + L P+ Y +++ +
Sbjct: 442 LLEIQG-RGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 500
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K G + E S+ + + PD+ T + I K + +VF L P +
Sbjct: 501 KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 560
Query: 327 TFNSMIINYGKARLQGKAEYVFQ---KMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T++S+I + K QG+ E F+ +M P+ Y ++ ++ RAR++F
Sbjct: 561 TYSSLISGFCK---QGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLF 617
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
D + + G + T + M++ YC + EA LF + GV P S Y L K
Sbjct: 618 DGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKE 677
Query: 444 NMKELVQKLLKRMEQNGIVPNKRF 467
E L + M Q G F
Sbjct: 678 GDMEKAMNLFREMLQKGFATTLSF 701
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 113/251 (45%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
PN TY I+ +A+ +++ F+E+ ++ L PD + ++D + + G I E+ +
Sbjct: 207 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 266
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
M S ++IT+N+LI K +K ++ K ++ KP TF +I Y +
Sbjct: 267 KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCR 326
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
G+A + +M PS ++Y +I +C ++S A ++ ++++ G V
Sbjct: 327 EHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV 386
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
+ ++ Y G EA L + GV PD Y + +KA E L ++
Sbjct: 387 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 446
Query: 458 QNGIVPNKRFF 468
G+ P+ F
Sbjct: 447 GRGLKPDAVTF 457
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 126/300 (42%), Gaps = 9/300 (3%)
Query: 171 MRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK--GMERCKPNIVTYNILLR 228
M G P+ Y +ITA L +AK + +A F++M+ G+ KP+ + L+
Sbjct: 200 MGEKGLVPNTYTY-TIITAGLC---RAKRMNEAKLTFEEMQKTGL---KPDYNACSALID 252
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
+ ++D+V + + + ++ TYN ++ K G +++ +L M + CKP
Sbjct: 253 GFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKP 312
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
+ TF LLI+ Y + + ++ + P+ ++ +MI + A +
Sbjct: 313 NSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLL 372
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
+KMT P+ + Y +I Y + AR + D +S G + NA++
Sbjct: 373 EKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKA 432
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G EA G+ PD+ T+ Y+K K M +G++PN +
Sbjct: 433 GKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLY 492
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/331 (19%), Positives = 138/331 (41%), Gaps = 13/331 (3%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
++ + +T Y+ + A + + + A F EM+ +G +PD + +ALI + D
Sbjct: 202 EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 261
Query: 198 KALAKALGYFQKMKG-MERCKP--NIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
+ L ++K M C N++TYN+L+ + +++ + K + P+
Sbjct: 262 EVL--------RIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPN 313
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
T+ +++ Y + + +L M+ P +++ +I+ + ++ +
Sbjct: 314 SRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE 373
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
+ S KP + ++++I+ Y +A + M+ P Y II+
Sbjct: 374 KMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAG 433
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
+ A E+ G T A + Y G TEA F+ + G+ P++ Y
Sbjct: 434 KMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYT 493
Query: 435 LLYKAYTKA-NMKELVQKLLKRMEQNGIVPN 464
+L + KA N+ E + + + + G++P+
Sbjct: 494 VLINGHFKAGNLMEALS-IFRHLHALGVLPD 523
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 130/330 (39%), Gaps = 77/330 (23%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ + +FR M ++ + A T ++ LI K + + A LF EM PD Y +
Sbjct: 682 KAMNLFREMLQKGF--ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTV 739
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I H CK A +++ N LFKE+
Sbjct: 740 IDWH-------------------------CK---------------AGKMEEANLLFKEM 759
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
E L D TY +M Y K G E+ ++ +M + KPD +T+ L+I ++ K
Sbjct: 760 QERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKE--- 816
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
D + + FK + + GK + K T ++ +
Sbjct: 817 DNLVEAFKL---------------------RDEVVGKG--MLTKGT---------IHDLL 844
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
IT ++++ A ++ DE+ +LG ++ + ++ ++ G EA +FE ++G+
Sbjct: 845 ITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGL 904
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
PD++T L E + L+K++
Sbjct: 905 VPDTTTLIDLVNGNLNDTDSEDARNLIKQL 934
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 71/185 (38%), Gaps = 17/185 (9%)
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
+ F++LIDSY + D+ VF + +L NS+ +
Sbjct: 157 VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSL-----------------RS 199
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M P+ TY I ++ A+ F+E+ K G + +A+++ + G
Sbjct: 200 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 259
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
E + + + G+ + TY +L K E ++LK M G PN R F
Sbjct: 260 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 319
Query: 471 ALETF 475
+E +
Sbjct: 320 LIEGY 324
>gi|168061839|ref|XP_001782893.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665615|gb|EDQ52293.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 713
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 174/396 (43%), Gaps = 52/396 (13%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
++VF+WMQ D +Y +I V+ + +A +F E SG P Y L++
Sbjct: 7 IQVFQWMQALPDLKPDELVYRTIINVLINARRMNVAEAVFEEFVKSGMSPSHDDYVILMS 66
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE--- 245
+ K +L + +G QKM+ P + YN++L C ++ D +N + +
Sbjct: 67 GY----TKCGSLQRGIGILQKMR-EAGIHPQVSAYNVILEGCTRSTRGD-INGMMEAHRI 120
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
L + L D T+N +M+A + G I++++ + M+ + PD+ T ++LI+++G+ +
Sbjct: 121 LMDMGLQQDSVTFNIIMNALNRVGRIRDVDRYWALMRMGRIVPDLTTCSILINAFGRARD 180
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA----------MK 355
+ K++ V + K L +NS+I YGKA L + E V + + A
Sbjct: 181 WHKVDLVLAEMETYGIKADLMIYNSLISVYGKAGLFYEVELVVKSLRAEIARREDLGNSS 240
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC----MNGLP 411
+TY ++ +YG + F E+ K G V T ++++ AY +G
Sbjct: 241 LAFDLVTYNTLLDVYGKAGRLDDVIYWFGEMKKSGVQPDVLTFDSLVNAYGKASHYDGEV 300
Query: 412 TE--------ADLLF---------------------ENSHNMGVTPDSSTYKLLYKAYTK 442
E +DL+F E+ G P S TY L A+ +
Sbjct: 301 LELFRKYNYKSDLVFYNTLLFMFGKGGHYADAWKILEDMKAAGFMPTSETYNSLILAFGR 360
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ + + L+RM+ NG+ P + F LE +S S
Sbjct: 361 GSQWQEAENTLERMKANGVKPVAQSFSFLLEAYSLS 396
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 147/346 (42%), Gaps = 23/346 (6%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKA---L 200
D+ ++ ++ + + G+ R ++ MR PD + + LI A RD K L
Sbjct: 129 DSVTFNIIMNALNRVGRIRDVDRYWALMRMGRIVPDLTTCSILINAFGRARDWHKVDLVL 188
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI---------- 250
A+ Y K +++ YN L+ +A +V + K L I
Sbjct: 189 AEMETY--------GIKADLMIYNSLISVYGKAGLFYEVELVVKSLRAEIARREDLGNSS 240
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
LA D+ TYN ++D YGK G + ++ MK + +PD++TF+ L+++YGK +D
Sbjct: 241 LAFDLVTYNTLLDVYGKAGRLDDVIYWFGEMKKSGVQPDVLTFDSLVNAYGKASHYDG-- 298
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+V + K L +N+++ +GK A + + M A + P+ TY +I +
Sbjct: 299 EVLELFRKYNYKSDLVFYNTLLFMFGKGGHYADAWKILEDMKAAGFMPTSETYNSLILAF 358
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
G A + + G + + +LEAY ++G + + L +
Sbjct: 359 GRGSQWQEAENTLERMKANGVKPVAQSFSFLLEAYSLSGQIPKGEKLIVKMKEENLIYGI 418
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+ + L + Y +A + + + + G PN+ F+ +E +
Sbjct: 419 AGHNSLLRFYMRAGDIGSIIQTYETCQTRGPKPNQSSFVPMIEALT 464
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 147/338 (43%), Gaps = 19/338 (5%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL-AK 202
D Y+ L+ V GK G+ ++ F EM+ SG +PD +++L+ A+ KA +
Sbjct: 244 DLVTYNTLLDVYGKAGRLDDVIYWFGEMKKSGVQPDVLTFDSLVNAY----GKASHYDGE 299
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
L F+K K ++V YN LL + + + +++ + P TYN ++
Sbjct: 300 VLELFRKYN----YKSDLVFYNTLLFMFGKGGHYADAWKILEDMKAAGFMPTSETYNSLI 355
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
A+G+ +E E+ L RMK+N KP +F+ L+++Y K E++ +
Sbjct: 356 LAFGRGSQWQEAENTLERMKANGVKPVAQSFSFLLEAYSLSGQIPKGEKLIVKMKEENLI 415
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP---SFITYECIITMYGYCDNVSRA 379
+ NS++ Y +A G ++ P SF+ +T D R
Sbjct: 416 YGIAGHNSLLRFYMRAGDIGSIIQTYETCQTRGPKPNQSSFVPMIEALTKENTVD--ERF 473
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD-SSTYKLLYK 438
I +L D+ + A+L A G +AD L +G +PD + ++
Sbjct: 474 WGIAQDLENAPFDVHFAIHGALLSALGRCGQSPDADRLLGILKRLGCSPDICNLFEEGEA 533
Query: 439 AYTKANMKELVQK---LLKRMEQNGI-VPNKRFFLEAL 472
A +K + +E ++ L +EQ G+ + +R F AL
Sbjct: 534 AQSKLSGEEAWKRLATLFNSLEQEGVNMEAERNFHNAL 571
>gi|168005568|ref|XP_001755482.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693189|gb|EDQ79542.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 765
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 164/372 (44%), Gaps = 27/372 (7%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
F LGKS + + + VF + + + + +++ M G+ A LF +++ G
Sbjct: 229 FSVLGKSGQSRKAIRVFNELPLDSEVRKNVFVCNSILSTMIYNGKIDKAFRLFEQLKKEG 288
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
+PD Y+ +I TRD +KAL + +K + + V Y ++ CA
Sbjct: 289 LQPDTVTYSTVIAGCAKTRD---GYSKALALIEDIKASGLTQ-DAVIYGAMMNVCASQGL 344
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
+ A F+E+ ++ P+++ Y+ +++AY G ++ E VL +++ P+++ +N
Sbjct: 345 DREAQATFQEMCDAGFTPNLFHYSSLLNAYASRGKYQQAERVLEAIRAAGLTPNLVVYNS 404
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
L+++Y Q K +VF + + + +F SM+ Y K+ + +A+ F M A
Sbjct: 405 LMNAYANCQMPSKAREVFDRIEAEGLQRDMVSFCSMMDAYAKSDMLKEAQETFDSMIAQG 464
Query: 356 YTPSF--------------------ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
P + + Y +I+ Y + ++ D++ K G++ +
Sbjct: 465 MKPVYMLMQLLDLSGSLCSYGWWGSVGYSILISAYAKLGEMDGVLKLVDQIEK-GQNGEC 523
Query: 396 STL--NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
L N +L+ YC G + + G D T+ +L + K ++ +L K L
Sbjct: 524 DILLFNTLLKVYCNAGYMDGVTAVLKKMDAEGCGSDRGTFNILIGYFAKEDLGDLALKTL 583
Query: 454 KRMEQNGIVPNK 465
+ ME G PN+
Sbjct: 584 EDMETRGHRPNE 595
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 166/410 (40%), Gaps = 72/410 (17%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKA-------- 199
YS L+ +G+ + A + +R +G P+ VYN+L+ A+ + + +KA
Sbjct: 367 YSSLLNAYASRGKYQQAERVLEAIRAAGLTPNLVVYNSLMNAYANCQMPSKAREVFDRIE 426
Query: 200 -----------------------LAKALGYFQKM--KGMERCKP---------------- 218
L +A F M +GM KP
Sbjct: 427 AEGLQRDMVSFCSMMDAYAKSDMLKEAQETFDSMIAQGM---KPVYMLMQLLDLSGSLCS 483
Query: 219 ----NIVTYNILLRACAQARNVDQVNALFKELHESILAP-DIYTYNGVMDAYGKNGMIKE 273
V Y+IL+ A A+ +D V L ++ + DI +N ++ Y G +
Sbjct: 484 YGWWGSVGYSILISAYAKLGEMDGVLKLVDQIEKGQNGECDILLFNTLLKVYCNAGYMDG 543
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
+ +VL +M + C D TFN+LI + K D + + + +P T+N++
Sbjct: 544 VTAVLKKMDAEGCGSDRGTFNILIGYFAKEDLGDLALKTLEDMETRGHRPNEATYNALFQ 603
Query: 334 NYGKARLQGKAEYVFQKMTAMK---YTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
Y K GK E +F+ + AMK TP+ ++ + I+ + + F L G
Sbjct: 604 GYVK---NGKMEEMFEALEAMKQRGITPTNLSLQTIMLGCIEHNRIDVVLAYFPYLKATG 660
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM---GVTPDSSTYKLLYKAYTKANMKE 447
+ S + ++EA G + D++ + H M G P T+ L+ + Y E
Sbjct: 661 IALSYSVMERLVEALVETG---QMDVVKDALHLMQTTGQQPSQKTWDLVLQKYVSLGEYE 717
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTRSLST 497
+ +LL+ ++ G+ + +LE L+ S S G D T+S+S+
Sbjct: 718 KLLQLLEELKDAGVTASAATYLELLKQVSESDKGV---DMLGDFTKSVSS 764
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 115/263 (43%), Gaps = 7/263 (2%)
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHES-ILAPDIYT-YNGVMDAYGKNGMIKEMESV 277
I+ N +LR A+ + A+F+ + E+ L+P YT Y V+ GK+G ++ V
Sbjct: 188 IMDLNSVLRRFAKMKQWRDACAVFEYMKENNKLSPPTYTSYFSVL---GKSGQSRKAIRV 244
Query: 278 LSRMK-SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+ + ++ + ++ N ++ + DK ++F+ L +P T++++I
Sbjct: 245 FNELPLDSEVRKNVFVCNSILSTMIYNGKIDKAFRLFEQLKKEGLQPDTVTYSTVIAGCA 304
Query: 337 KARLQ-GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
K R KA + + + A T + Y ++ + A+ F E+ G +
Sbjct: 305 KTRDGYSKALALIEDIKASGLTQDAVIYGAMMNVCASQGLDREAQATFQEMCDAGFTPNL 364
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+++L AY G +A+ + E G+TP+ Y L AY M +++ R
Sbjct: 365 FHYSSLLNAYASRGKYQQAERVLEAIRAAGLTPNLVVYNSLMNAYANCQMPSKAREVFDR 424
Query: 456 MEQNGIVPNKRFFLEALETFSSS 478
+E G+ + F ++ ++ S
Sbjct: 425 IEAEGLQRDMVSFCSMMDAYAKS 447
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 71/160 (44%), Gaps = 9/160 (5%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
+D G ++ LI K+ LA+ +M G RP+ + YNAL ++ K
Sbjct: 558 SDRGTFNILIGYFAKEDLGDLALKTLEDMETRGHRPNEATYNALFQGYVKN-------GK 610
Query: 203 ALGYFQKMKGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
F+ ++ M++ P ++ ++ C + +D V A F L + +A
Sbjct: 611 MEEMFEALEAMKQRGITPTNLSLQTIMLGCIEHNRIDVVLAYFPYLKATGIALSYSVMER 670
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
+++A + G + ++ L M++ +P T++L++ Y
Sbjct: 671 LVEALVETGQMDVVKDALHLMQTTGQQPSQKTWDLVLQKY 710
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 144/324 (44%), Gaps = 14/324 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++ L+ + + Q A L M+ GC PD ++YNALI+ + KAK +A
Sbjct: 41 DAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALISGY----SKAKDFGQA 96
Query: 204 LGYFQKMKGMERCKPNIVTY-NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
+ +M C P +VTY NI+ C R D V L E+ + +P+IYTYN ++
Sbjct: 97 FKFLAEMVK-NHCLPTVVTYTNIVDGLCKAERTRDAVK-LLDEMRDKGCSPNIYTYNVIV 154
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+ + + E + +L M PD++T+N I K D++++ K L
Sbjct: 155 EGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCK---CDRVDEARKFLARMPVT 211
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAR 380
P + ++ ++I K+ A + M+ TP +TY +I G+C V RA
Sbjct: 212 PDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLID--GFCKGGEVERAM 269
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ D + KLG + N++L A G +A+ + G TPD +Y
Sbjct: 270 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGL 329
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
KA + + + RM + G PN
Sbjct: 330 CKAERVKKAKAVFDRMVERGCTPN 353
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 140/318 (44%), Gaps = 29/318 (9%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
R D YS LI K G+ AM L M GCRP+ YN+L+ A LH
Sbjct: 242 NRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGA-LHR---- 296
Query: 198 KALAKALGYFQKMKGM----ER--CKPNIVTYNILLRACAQARNVDQVNALFKELHE--- 248
LG+ K + M ER P++V+YN + +A V + A+F + E
Sbjct: 297 ------LGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGC 350
Query: 249 -------SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ-CKPDIITFNLLIDSY 300
S+L DI Y ++D K G E ++ S++ + C+PD+ +N+++DS+
Sbjct: 351 TPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSH 410
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
KR+ DK Q+ K ++ K + T+N ++ AE + M + P F
Sbjct: 411 CKRRQIDKALQIHKQMLE-KNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDF 469
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
+TY ++ C + A E+F+E K G V T +A++ + EA LLF
Sbjct: 470 VTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTK 529
Query: 421 SHNMGVTPDSSTYKLLYK 438
PD T LL++
Sbjct: 530 LVERRWVPDDKTLGLLHR 547
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 146/336 (43%), Gaps = 21/336 (6%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ +I + K G A + M N GC PD Y++LI K + +A
Sbjct: 213 DVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFC----KGGEVERA 268
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+G M + C+PN+V YN LL A + ++ + + E+ PD+ +YN +D
Sbjct: 269 MGLLDSMLKLG-CRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACID 327
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKP----------DIITFNLLIDSYGKRQAFDKMEQVF 313
K +K+ ++V RM C P DI+ + +L+D K FD+ +F
Sbjct: 328 GLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALF 387
Query: 314 KSLMHSKE-KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGY 372
++ K +P + +N M+ ++ K R KA + ++M K + +T+ I ++G
Sbjct: 388 SKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLE-KNCCNVVTWN--ILVHGL 444
Query: 373 C--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
C D +S A + + G T +++A C G A LFE + G PD
Sbjct: 445 CVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDV 504
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
TY L NM E L ++ + VP+ +
Sbjct: 505 VTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDK 540
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 146/346 (42%), Gaps = 26/346 (7%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL---HT 193
K+ + D IY+ LI+ K A +EM + C P Y ++ T
Sbjct: 69 KEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERT 128
Query: 194 RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP 253
RD K L + + KG C PNI TYN+++ + R +D+ + +E+ P
Sbjct: 129 RDAVKLLDE-----MRDKG---CSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
D+ TYN + K + E L+RM PD++++ +I+ K D ++
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARMPVT---PDVVSYTTVINGLCKSGDLDSASRML 237
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
+ + P + T++S+I + K +A + M + P+ + Y ++
Sbjct: 238 DHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRL 297
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
++ +A ++ E+ + G V + NA ++ C +A +F+ G TP++S+Y
Sbjct: 298 GHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSY 357
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSL 479
+L +V LL + +G+ RF EA FS L
Sbjct: 358 SML-----------IVDILLYTVLLDGLCKGGRFD-EACALFSKVL 391
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 140/317 (44%), Gaps = 8/317 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+KL+ + ++ + A +F EM + C+PD + L+ + KA K LG
Sbjct: 10 YNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA-RKLLGRM 68
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M C P+ YN L+ ++A++ Q E+ ++ P + TY ++D K
Sbjct: 69 KEMG----CVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCK 124
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
++ +L M+ C P+I T+N++++ + + D+ +++ + + P + T
Sbjct: 125 AERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVT 184
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+NS I K +A +M TP ++Y +I ++ A + D +S
Sbjct: 185 YNSFIKGLCKCDRVDEARKFLARMPV---TPDVVSYTTVINGLCKSGDLDSASRMLDHMS 241
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G V T +++++ +C G A L ++ +G P+ Y L A +
Sbjct: 242 NRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIG 301
Query: 448 LVQKLLKRMEQNGIVPN 464
+ +L ME+ G P+
Sbjct: 302 KAEDMLVEMERRGFTPD 318
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/390 (21%), Positives = 158/390 (40%), Gaps = 74/390 (18%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKAL- 204
Y+ ++ + K +TR A+ L EMR+ GC P+ YN ++ R D+AK + + +
Sbjct: 115 YTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMA 174
Query: 205 --GYFQK-------MKGMERCK---------------PNIVTYNILLRACAQARNVDQVN 240
GYF +KG+ +C P++V+Y ++ ++ ++D +
Sbjct: 175 VRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSAS 234
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
+ + PD+ TY+ ++D + K G ++ +L M C+P+++ +N L+ +
Sbjct: 235 RMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGAL 294
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
+ K E + + P + ++N+ I KA KA+ VF +M TP+
Sbjct: 295 HRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNA 354
Query: 361 ITYECIIT--------MYGYC--------------------------------DNVSRAR 380
+Y +I + G C D+ + R
Sbjct: 355 SSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRR 414
Query: 381 EIFDELSKLGKDM------KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
+I D+ ++ K M V T N ++ C++ ++A+ + + G PD TY
Sbjct: 415 QI-DKALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYG 473
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L A K +L + + G VP+
Sbjct: 474 TLVDAMCKCGKSAAALELFEEAVKGGCVPD 503
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 83/203 (40%)
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
+++TYN ++ + + +V M C+PD TF +L+ + +K ++
Sbjct: 6 NVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLL 65
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
+ P +N++I Y KA+ G+A +M P+ +TY I+
Sbjct: 66 GRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKA 125
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ A ++ DE+ G + T N ++E C EA + E G PD TY
Sbjct: 126 ERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTY 185
Query: 434 KLLYKAYTKANMKELVQKLLKRM 456
K K + + +K L RM
Sbjct: 186 NSFIKGLCKCDRVDEARKFLARM 208
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%)
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
+G + V T N +L +A +F+ + PD+ T+ +L + ++N E
Sbjct: 1 MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60
Query: 449 VQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+KLL RM++ G VP+ + + +S +
Sbjct: 61 ARKLLGRMKEMGCVPDDAIYNALISGYSKA 90
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 7/259 (2%)
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
R +P+ + N LL A A VD FK ++PD++T+N V+ K G +++
Sbjct: 145 RHRPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKA 204
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV---FKSLMHSKEKPTLPTFNSM 331
V +++ P ++T+N +ID Y KR +M V K ++ + P TFN +
Sbjct: 205 GDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVL 264
Query: 332 IINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKL 389
+ Y K A VF++M S +TY ++ +G C V ++ DE+ L
Sbjct: 265 VNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALV--WGLCSEGKVEEGVKLVDEMKDL 322
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
G ++TLN++L +C G+ T+A+ ++ V P+ TY +L Y + + +
Sbjct: 323 GLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDA 382
Query: 450 QKLLKRMEQNGIVPNKRFF 468
+ + M G+ PN R +
Sbjct: 383 LAVKEAMSGKGVRPNARIY 401
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 133/312 (42%), Gaps = 11/312 (3%)
Query: 156 GKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER 215
G+ G+ L EM +G P+ +N L+ + + A A+ F++MK +
Sbjct: 234 GRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVR----VFEEMK-QQG 288
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
++VTY+ L+ V++ L E+ + L P++ T N V++ + K GM+ + E
Sbjct: 289 IAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAE 348
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF--KSLMHSKE-KPTLPTFNSMI 332
+ M+ KP+++T+ +L+D Y + DKM+ K M K +P +N +I
Sbjct: 349 GWIDSMEQKNVKPNVVTYTILVDGY---RRLDKMKDALAVKEAMSGKGVRPNARIYNCLI 405
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKD 392
+ + + +M +TY +I V +A ++ DE+ +G +
Sbjct: 406 AGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLE 465
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
T N ++ YC G A + + TY + K + E +L
Sbjct: 466 PVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNEL 525
Query: 453 LKRMEQNGIVPN 464
L M + G+VPN
Sbjct: 526 LNEMLEKGLVPN 537
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 137/319 (42%), Gaps = 8/319 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++ +I+ + K GQ R A + ++R G P YN +I + R +A +
Sbjct: 184 DLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCK-RGRAGRMYHV 242
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
++M G+ PN VT+N+L+ + N +F+E+ + +A + TY+ +
Sbjct: 243 DALLKEMVEAGIS---PNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSAL 299
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ G ++E ++ MK P++ T N +++ + K+ E S+
Sbjct: 300 VWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNV 359
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
KP + T+ ++ Y + A V + M+ P+ Y C+I + +
Sbjct: 360 KPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSG 419
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ DE+ G + T N ++ A C+ G +A L + +G+ P TY + Y
Sbjct: 420 LLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYC 479
Query: 442 -KANMKELVQKLLKRMEQN 459
K N+K ++ RME+
Sbjct: 480 EKGNIKS-AYEIRTRMEKG 497
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 121/288 (42%), Gaps = 40/288 (13%)
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY---GKNGMI 271
R P++ T+NI++ + + + + K++ LAP + TYN ++D Y G+ G +
Sbjct: 180 RVSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRM 239
Query: 272 KEMESVLSRMKSNQCKPDIITFNLLIDSYGKR-------QAFDKMEQ--------VFKSL 316
++++L M P+ +TFN+L++ Y K + F++M+Q + +L
Sbjct: 240 YHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSAL 299
Query: 317 ---MHSKEK-----------------PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
+ S+ K P L T NS++ + K + AE M
Sbjct: 300 VWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNV 359
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
P+ +TY ++ Y D + A + + +S G N ++ + NG
Sbjct: 360 KPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSG 419
Query: 417 LFENSHNMGVTPDSSTYKLLYKAY-TKANMKELVQKLLKRMEQNGIVP 463
L + GV D TY +L A K +++ V KLL M G+ P
Sbjct: 420 LLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAV-KLLDEMLMVGLEP 466
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 130/320 (40%), Gaps = 50/320 (15%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
+ VF M KQ+ A YS L+ + +G+ + L EM++ G P+ + N+++
Sbjct: 278 VRVFEEM-KQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLN 336
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
K + A G+ M+ + KPN+VTY IL+ + + A+ + +
Sbjct: 337 GFC----KKGMMTDAEGWIDSME-QKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSG 391
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
+ P+ YN ++ + +NG + + +L M+ + DI+T+N+LI + + K
Sbjct: 392 KGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRK 451
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
++ ++ +P T+N+ IIN
Sbjct: 452 AVKLLDEMLMVGLEPVHLTYNT-IIN---------------------------------- 476
Query: 369 MYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
GYC+ N+ A EI + K K V T N ++ C G E + L G+
Sbjct: 477 --GYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGL 534
Query: 427 TPDSSTYK-----LLYKAYT 441
P+ TY ++ K YT
Sbjct: 535 VPNGVTYDTIKEGMMEKGYT 554
>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
Length = 428
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 158/375 (42%), Gaps = 14/375 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L K+ K LE+ M Y A Y+ LI + K G A L +M ++
Sbjct: 16 LIAGLCKARKPRHALELLHVMAAN-GYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADA 74
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER--CKPNIVTYNILLRACAQ 232
GC P+ Y ALI R A+ Q +K M R C+P++VTYN L+
Sbjct: 75 GCAPNVVTYTALIDGLCKARRPHDAI-------QTVKRMLRSGCEPDLVTYNSLIHGLCM 127
Query: 233 ARNVDQVNALFKELH-ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
A +D + +EL ES PD+ TYN + K G + + +L M PD++
Sbjct: 128 ANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVV 187
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
TF +I K D QVFK ++ P T++ M+ N +A E V + M
Sbjct: 188 TFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHM 247
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG-L 410
+ TY +I ++ A +++ + G M+V T NA + A C +G
Sbjct: 248 VKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKF 307
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV-PNKRFFL 469
P ++L + G P+ +Y + K+ + KL ++M +G P+ FF
Sbjct: 308 PLAKNILLGMIES-GSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFN 366
Query: 470 EALETFSSSLAGSQS 484
+ F + SQ+
Sbjct: 367 TLISGFCKAGRLSQA 381
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 111/240 (46%), Gaps = 3/240 (1%)
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
YN L+ +AR L + + + TY ++D K+G + +++L +M
Sbjct: 13 YNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA 72
Query: 283 SNQCKPDIITFNLLIDSYGK-RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
C P+++T+ LID K R+ D ++ V K ++ S +P L T+NS+I A
Sbjct: 73 DAGCAPNVVTYTALIDGLCKARRPHDAIQTV-KRMLRSGCEPDLVTYNSLIHGLCMANRM 131
Query: 342 GKAEYVFQK-MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
A V Q+ M P +TY I+ + + E+ +E+ + G V T +
Sbjct: 132 DDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCS 191
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
++ C +A +F+ G PDS TY ++ ++AN + V+++L+ M ++G
Sbjct: 192 IISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSG 251
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 109/243 (44%), Gaps = 10/243 (4%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ L K+++ +VF+ M +R + D+ YS ++ + + + + M S
Sbjct: 192 IISGLCKANRIDDAFQVFKGML-ERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKS 250
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G + Y LI A + D A + Y Q M+ C + T+N + A ++
Sbjct: 251 GHYALSATYAPLIHALIRAGDIESA---SWAYEQAMEA--GCVMEVYTHNAFIGALCRSG 305
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITF 293
+ + ES P++ +YN V+D K+G + + + +M S CKPD+I F
Sbjct: 306 KFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFF 365
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKE--KPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
N LI + K + +Q+ K M +K P + T+N+MI K +A+ + ++M
Sbjct: 366 NTLISGFCKAGRLSQAQQLLKE-MKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEM 424
Query: 352 TAM 354
A+
Sbjct: 425 QAV 427
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 92/226 (40%), Gaps = 5/226 (2%)
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
D YN ++ K + +L M +N ++T+ LID K D + +
Sbjct: 9 DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
+ + + P + T+ ++I KAR A ++M P +TY +I +G C
Sbjct: 69 QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLI--HGLC 126
Query: 374 --DNVSRAREIFDELS-KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
+ + A + EL + G+ V T N + C G + + E G++PD
Sbjct: 127 MANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDV 186
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
T+ + KAN + ++ K M + G VP+ + L+ S
Sbjct: 187 VTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLS 232
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 153/350 (43%), Gaps = 6/350 (1%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E+ + M+K++ + YS LI G A +F EMR D VY+++I+
Sbjct: 273 EILKLMEKEQ-VVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMIS- 330
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ + +A F +M + PN TY L+ +A ++ L E+
Sbjct: 331 ---WSRRLGNMKRAFALFDEMSQRD-IVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSK 386
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+ ++ +N MD Y + G + E + + M+ D+ T+N+L + K +D+
Sbjct: 387 GVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEA 446
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
+ + S++ KP + TF I Y K +AE +F+ M P+ ITY +I
Sbjct: 447 KCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDA 506
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
Y + V +A +I E+ G + T ++++ C+ G EA LF G+T +
Sbjct: 507 YCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRN 566
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSL 479
+TY + +K + KL M + G++P+ R F + +F L
Sbjct: 567 VATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHKPL 616
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 155/361 (42%), Gaps = 20/361 (5%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM 171
C +LF + + + + V+ +++++ I + + L+A + + G+ + F M
Sbjct: 148 CDMLFRVCSDNRLFDETIRVYDYVEEKGLVIEERSCFVLLLA-LKRCGEVDFCVRFFHRM 206
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
S + + V + + + R AK L +M G KPN+ TYN LL A
Sbjct: 207 VESN-KFEIRVQSLTLVIDVLCRRGEVEKAKEL--MDEMVGKGIVKPNVFTYNTLLNAYV 263
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
++ V+ + K + + + + TY+ ++ Y +G I+E E + M+ + D+
Sbjct: 264 GRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVY 323
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP---TFNSMIINYGKARLQGKAEYVF 348
++ +I S+ +R M++ F ++ +P T+ ++I KA AE +
Sbjct: 324 VYSSMI-SWSRR--LGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILL 380
Query: 349 QKMTAMKYTPSFITYECIITMYGYC-----DNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
+M + + + + TM GYC D R + I + K G + V T N +
Sbjct: 381 LEMQSKGVDLNLVIFN--TTMDGYCRRGKMDEALRLQAI---MEKKGINADVFTYNILAN 435
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
C EA + + GV P+ T+ + + Y K ++L + ME+ G VP
Sbjct: 436 GLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVP 495
Query: 464 N 464
N
Sbjct: 496 N 496
>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Glycine max]
Length = 545
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 148/322 (45%), Gaps = 22/322 (6%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + K G+TR A+ L + P+ +YN +I K K +++A F
Sbjct: 171 YGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLC----KRKLVSEACNLF 226
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M KG+ N+VTY+ ++ + + E+ + PD+Y YN ++DA
Sbjct: 227 SEMSVKGIS---ANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDAL 283
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G +KE ++VL+ + KP++IT+N LID Y K VF ++ P +
Sbjct: 284 HKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAK--------HVFNAVGLMGVTPDV 335
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIF 383
++N MI K + +A ++++M P+ +TY +I G C + +S A ++
Sbjct: 336 WSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLID--GLCKSGRISYAWDLI 393
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK-LLYKAYTK 442
DE+ G V T N+++ C NG +A L + G+ PD T LL+ K
Sbjct: 394 DEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCK 453
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
+ Q L + + G PN
Sbjct: 454 GKRLKNAQGLFQDLLDKGYHPN 475
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 138/322 (42%), Gaps = 53/322 (16%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D IY+ L+ + K+G+ + A + + + + +P+ YN LI + AK + A
Sbjct: 272 DVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY------AKHVFNA 325
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+G + P++ +YNI++ + + V++ L+KE+H+ + P+ TYN ++D
Sbjct: 326 VG-------LMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLID 378
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K+G I ++ M ++IT+N LI+ K DK + + +P
Sbjct: 379 GLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQP 438
Query: 324 TLPTFNSMIINYG---KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+ T N I+ +G K + A+ +FQ + Y P+ TY II YG+C
Sbjct: 439 DMYTLN--ILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIII--YGHCK------ 488
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
GL EA L + G +P++ T+K++ A
Sbjct: 489 ---------------------------EGLLDEAYALQSKMEDSGCSPNAITFKIIICAL 521
Query: 441 TKANMKELVQKLLKRMEQNGIV 462
+ + +KLL M G++
Sbjct: 522 LEKGETDKAEKLLCEMIARGLL 543
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 102/201 (50%), Gaps = 7/201 (3%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ L K + + L +++ M Q+ + +T Y+ LI + K G+ A L EM +
Sbjct: 340 IMINRLCKIKRVEEALNLYKEMH-QKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHD 398
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRAC-AQ 232
G + YN+LI K L KA+ KMK + +P++ T NILL +
Sbjct: 399 RGHHANVITYNSLINGLC----KNGQLDKAIALINKMKD-QGIQPDMYTLNILLHGLLCK 453
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+ + LF++L + P++YTYN ++ + K G++ E ++ S+M+ + C P+ IT
Sbjct: 454 GKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAIT 513
Query: 293 FNLLIDSYGKRQAFDKMEQVF 313
F ++I + ++ DK E++
Sbjct: 514 FKIIICALLEKGETDKAEKLL 534
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 127/289 (43%), Gaps = 6/289 (2%)
Query: 178 PDPSVYNALITAHLHTRDKA-KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
P+PS+ + +H H+R + + + AL F +M M R P I+ +N +L + A+ ++
Sbjct: 23 PNPSLPK--LHSHFHSRPPSFENVDDALFQFHRMLCM-RHTPPIIQFNKILDSFAKMKHY 79
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
V +L + L + PD +T N +++ + G I SVLS++ +PD +T L
Sbjct: 80 PTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTL 139
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
I + K L+ + ++ ++I K A + +++
Sbjct: 140 IKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLT 199
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
P+ + Y II VS A +F E+S G V T +A++ +C+ G TEA L
Sbjct: 200 EPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEA-L 258
Query: 417 LFENSHNM-GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
F N + + PD Y L A K + + +L + + + PN
Sbjct: 259 GFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPN 307
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 110/281 (39%), Gaps = 31/281 (11%)
Query: 213 MERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIK 272
++ +P+ T NIL+ ++ ++ ++ + PD T ++ G +K
Sbjct: 91 LKAIQPDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVK 150
Query: 273 EMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
+ ++ + + D +++ LI+ K Q+ + + +P + +N++I
Sbjct: 151 KALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTII 210
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC------------------- 373
K +L +A +F +M+ + + +TY II +G+C
Sbjct: 211 DCLCKRKLVSEACNLFSEMSVKGISANVVTYSAII--HGFCIVGKLTEALGFLNEMVLKA 268
Query: 374 --DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG--------LPTEADLLFENSHN 423
+V + D L K GK + + A++ C+ + A +F
Sbjct: 269 INPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGL 328
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
MGVTPD +Y ++ K E L K M Q +VPN
Sbjct: 329 MGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPN 369
>gi|410110111|gb|AFV61135.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
duartei]
Length = 381
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 5/276 (1%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
D +YS LI + K A+ +FS ++ G PD YNA+I KAK +
Sbjct: 2 GDLVLYSNLIELSRKLCDYSKAISIFSRLKRLGFXPDLVAYNAMINVF----GKAKLFRE 57
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A +MK PN +Y+ LL + + + ++F E+ E D+ T N ++
Sbjct: 58 ARSLIGEMK-TAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMI 116
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D YG+ GM KE + + M+ +P+++++N L+ YG + F + +F+ + +
Sbjct: 117 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 176
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
+ T+NSM++ YGK KA + Q+M + P+ ITY II+++G + RA +
Sbjct: 177 QNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAXL 236
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
F +L G ++ M+ AY GL A L
Sbjct: 237 FQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLL 272
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 130/263 (49%), Gaps = 1/263 (0%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+KA+ F ++K + P++V YN ++ +A+ + +L E+ + + P+ +Y+
Sbjct: 21 SKAISIFSRLKRLG-FXPDLVAYNAMINVFGKAKLFREARSLIGEMKTAGVMPNTTSYST 79
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ Y +N E SV S M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 80 LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 139
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P + ++N+++ YG A L G+A ++F+ M + +TY ++ +YG +A
Sbjct: 140 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 199
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ E+ G + T + ++ + G A LF+ + GV D ++ + AY
Sbjct: 200 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAXLFQKLRSSGVEIDQILFQTMIVAY 259
Query: 441 TKANMKELVQKLLKRMEQNGIVP 463
+A + ++LL +++ +P
Sbjct: 260 ERAGLVAHAKRLLHELKRPDNIP 282
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 140/340 (41%), Gaps = 42/340 (12%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L EM+ +G P+ + Y+ L+T ++
Sbjct: 31 KRLGFXPDLVAYNAMINVFGKAKLFREARSLIGEMKTAGVMPNTTSYSTLLTMYVEN--- 87
Query: 197 AKALAKALGYFQKMK--------------------------------GMER--CKPNIVT 222
K +AL F +M+ GM + +PN+V+
Sbjct: 88 -KKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 146
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
YN LLR A + LF+ + + ++ TYN +M YGK ++ +++ M+
Sbjct: 147 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQ 206
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
S +P+ IT++ +I +GK D+ +F+ L S + F +MI+ Y +A L
Sbjct: 207 SRGIEPNSITYSTIISIWGKVGKLDRAAXLFQKLRSSGVEIDQILFQTMIVAYERAGLVA 266
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
A+ + ++ P I + I + + A +F + G+ ++ M+
Sbjct: 267 HAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQXIDAGEVKDITVFERMI 322
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+ +F+ +G PDS ++ AY K
Sbjct: 323 HLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGK 362
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 117/250 (46%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
++V Y+ L+ + + + ++F L PD+ YN +++ +GK + +E S++
Sbjct: 3 DLVLYSNLIELSRKLCDYSKAISIFSRLKRLGFXPDLVAYNAMINVFGKAKLFREARSLI 62
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
MK+ P+ +++ L+ Y + + F + VF + K L T N MI YG+
Sbjct: 63 GEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 122
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
+ +A+ +F M M P+ ++Y ++ +YG + A +F + + + V T
Sbjct: 123 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 182
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N+M+ Y +A+ L + + G+ P+S TY + + K + L +++
Sbjct: 183 NSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAXLFQKLRS 242
Query: 459 NGIVPNKRFF 468
+G+ ++ F
Sbjct: 243 SGVEIDQILF 252
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 133/286 (46%), Gaps = 12/286 (4%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
++ K+L+ L VF M++ + + D + +I V G+ G + A LF MR G P+
Sbjct: 86 ENKKFLEALSVFSEMREIKCLL-DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 144
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
YN L+ + A+ +A+ F+ M+ + + N+VTYN ++ + ++ N
Sbjct: 145 VSYNTLLRVY----GDAELFGEAIHLFRLMQ-RKNIEQNVVTYNSMMMIYGKTLEHEKAN 199
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
L +E+ + P+ TY+ ++ +GK G + + +++S+ + D I F +I +Y
Sbjct: 200 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAXLFQKLRSSGVEIDQILFQTMIVAY 259
Query: 301 GKRQAFDKMEQVFKSLMHSKEKP-TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
+ K L+H ++P +P ++ I G R++ +A YVF++
Sbjct: 260 ERAGLVAHA----KRLLHELKRPDNIPRDTAIHILAGAGRIE-EATYVFRQXIDAGEVKD 314
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+E +I + S E+FD++ LG + +L AY
Sbjct: 315 ITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAY 360
>gi|359495626|ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
chloroplastic [Vitis vinifera]
Length = 701
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 185/416 (44%), Gaps = 20/416 (4%)
Query: 62 VWTRPRSKRGRK----SEELESKELVRV---LMRSFSDKEPLVRTLNKYVKVVRSEHCFL 114
+W PRS R K S + LV++ L + +E + + L + + +
Sbjct: 89 IWVNPRSPRASKLRQHSYDARYASLVKIAESLDSCEATEEDVSQVLRCLGDKILEQDAVI 148
Query: 115 LFEELGKSDKWLQCLEVFR-WMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+ + + L FR ++ R I +Y+ + V K A LF EM
Sbjct: 149 VLNNMTNPETALLAFGFFRKRLKPSREVI----LYNVTLKVFRKCRNLDRAEKLFDEMLE 204
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALA-KALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
G +PD ++ +I+ + +L KA+ +F+KM C P+ VTY+ ++ A +
Sbjct: 205 RGVKPDNITFSTIISCA-----RVSSLPNKAVEWFEKMPEF-GCHPDDVTYSAMIDAYGR 258
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
A NVD L+ D T++ ++ YG +G +V MK+ KP+++
Sbjct: 259 AGNVDMALKLYDRARTEKWRIDPVTFSTLIRIYGMSGNFDGCLNVYEEMKALGVKPNLVI 318
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N L+D+ G+ + + + ++K + ++ +P+ T+ +++ YG+AR A V+++M
Sbjct: 319 YNTLLDAMGRAKRPWQAKNIYKEMTNNGLQPSWGTYAALLRAYGRARYAEDALIVYKEMK 378
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS-TLNAMLEAYCMNGLP 411
S + Y ++ M A IF+++ G M S T ++++ Y +G
Sbjct: 379 EKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMPDSWTFSSLITIYSCSGKV 438
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
+EA+ + G P+ L + Y KAN + V + R+ + I P+ RF
Sbjct: 439 SEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTFDRLLELDITPDDRF 494
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 118/256 (46%), Gaps = 7/256 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ + G++ L+++ + ++W I D +S LI + G G + ++ EM+
Sbjct: 252 MIDAYGRAGNVDMALKLYDRARTEKWRI-DPVTFSTLIRIYGMSGNFDGCLNVYEEMKAL 310
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G +P+ +YN L+ A +AK +A +++M +P+ TY LLRA +AR
Sbjct: 311 GVKPNLVIYNTLLDA----MGRAKRPWQAKNIYKEMTN-NGLQPSWGTYAALLRAYGRAR 365
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN-QCKPDIITF 293
+ ++KE+ E L + YN ++ G +E ++ MKS+ C PD TF
Sbjct: 366 YAEDALIVYKEMKEKGLELSVVLYNTLLAMCADVGYTEEAAAIFEDMKSSGNCMPDSWTF 425
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+ LI Y + E + +++ + +P + S+I YGKA + F ++
Sbjct: 426 SSLITIYSCSGKVSEAEAMLNAMLEAGFEPNIFVLTSLIQCYGKANRTDEVVRTFDRLLE 485
Query: 354 MKYTPSFITYECIITM 369
+ TP C++ +
Sbjct: 486 LDITPDDRFCGCMLNV 501
>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
Length = 628
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 162/349 (46%), Gaps = 19/349 (5%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIA-DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
GK DK L+ LE + R I D + +I+ + K + A +F M GC P
Sbjct: 201 GKLDKGLEMLE-----EMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVP 255
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
D Y+ ++ +L ++ + + L + Q MK C + T+N + A ++
Sbjct: 256 DSLTYSIMLD-NLSRANRLDTVDEVLEHMQAMKA--GCVMEVYTHNAFIGALCRSGKFPL 312
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLI 297
+ + ES P++ +YN V+D K+G + + + +M S CKPD+I FN LI
Sbjct: 313 AKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLI 372
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEK----PTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+ K ++ Q + L+ K K P + T+N++I K +A+ + Q+M A
Sbjct: 373 SGFCKAG---RLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQA 429
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
+ P+ +TY +I Y A +FDE+S G + T N +L A+ G+ ++
Sbjct: 430 VGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSK 489
Query: 414 ADLLFENSHNMG--VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
A+ +++ N +PD+ TY++L Y +A E LL+ M G
Sbjct: 490 AEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARG 538
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 142/301 (47%), Gaps = 8/301 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGC-RPDPSVYNALITAHLHTRDKAKALAKALGY 206
Y+ +I + K G A L +M +SGC +PD +N LI+ KA L++A
Sbjct: 332 YNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFC----KAGRLSQAHQL 387
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+MK C P++VTYN L+ ++ ++ Q L +E+ P++ TY +++ Y
Sbjct: 388 LIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYA 447
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH--SKEKPT 324
K+GM +E ES+ M + C PDIIT+N ++ ++ K K E V++ L + S P
Sbjct: 448 KHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPD 507
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV-SRAREIF 383
T+ +I Y +A + + Q+MTA ++ TY +I + V S+A ++
Sbjct: 508 AITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVY 567
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
++ S N+++ + G A + + + G D+S + L K A
Sbjct: 568 QQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKGHLVDASNLEALNKESNDA 627
Query: 444 N 444
+
Sbjct: 628 S 628
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 150/310 (48%), Gaps = 13/310 (4%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
I D Y+ I+ + K G+ + + EM G PD + ++I+ KA +
Sbjct: 184 IPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLC----KANRID 239
Query: 202 KALGYFQKMKGM-ER-CKPNIVTYNILLRACAQARNVDQVNALFKELH--ESILAPDIYT 257
A FQ KGM ER C P+ +TY+I+L ++A +D V+ + + + ++ ++YT
Sbjct: 240 DA---FQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYT 296
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
+N + A ++G +++L M + P+++++N +ID K D ++ + ++
Sbjct: 297 HNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKML 356
Query: 318 HSKE-KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY-TPSFITYECIITMYGYCDN 375
S KP + FN++I + KA +A + +M A P +TY +I +
Sbjct: 357 DSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGS 416
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+ +A+ + E+ +G V T A++ Y +G+ EA+ LF+ G PD TY
Sbjct: 417 LKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNT 476
Query: 436 LYKAYTKANM 445
+ A++KA M
Sbjct: 477 VLSAFSKAGM 486
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 164/393 (41%), Gaps = 63/393 (16%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
Y A Y+ LI + K G A L +M ++GC P+ Y ALI R A+
Sbjct: 6 YDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAI 65
Query: 201 AKALGYFQKMKGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
Q +K M R C+P++VTYN L+ A +D + +EL + AP+ TY
Sbjct: 66 -------QTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITY 118
Query: 259 NGVMDAYGK-------NGMIKEM---ESVL--------------SRMKSN--QCK----- 287
+ ++ + G+I+EM SV +R +S+ +C+
Sbjct: 119 STLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEM 178
Query: 288 ------PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
PD++T+N I K DK ++ + + P + TF S+I KA
Sbjct: 179 IESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRI 238
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR------EIFDELS--KLGKDM 393
A VF+ M P +TY ++ DN+SRA E+ + + K G M
Sbjct: 239 DDAFQVFKGMLERGCVPDSLTYSIML------DNLSRANRLDTVDEVLEHMQAMKAGCVM 292
Query: 394 KVSTLNAMLEAYCMNG-LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
+V T NA + A C +G P ++L + G P+ +Y + K+ + KL
Sbjct: 293 EVYTHNAFIGALCRSGKFPLAKNILLGMIES-GSLPNLLSYNFVIDGLCKSGNVDDAWKL 351
Query: 453 LKRMEQNGIV-PNKRFFLEALETFSSSLAGSQS 484
++M +G P+ FF + F + SQ+
Sbjct: 352 SRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQA 384
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 147/414 (35%), Gaps = 105/414 (25%)
Query: 142 IADTGI------YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRD 195
+AD G Y+ LI + K + A+ M SGC PD YN+LI H
Sbjct: 36 MADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLI----HGLC 91
Query: 196 KAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH------ 247
A + A Q++ G PN +TY+ L+ + R +DQ L +E+
Sbjct: 92 MANRMDDAGLVLQELVRNGF---APNHITYSTLVIWNCRRRRLDQARGLIREMILRGSVC 148
Query: 248 -------------------------------ESILAPDIYTYNGVMDAYGKNGMIKEMES 276
ES PD+ TYN + K G + +
Sbjct: 149 NLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLE 208
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+L M PD++TF +I K D QVFK ++ P T++ M+ N
Sbjct: 209 MLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLS 268
Query: 337 KARLQGKAEYVFQKMTAMK-------YT------------------------------PS 359
+A + V + M AMK YT P+
Sbjct: 269 RANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPN 328
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDM--------KVSTLNAMLEAYCMNGLP 411
++Y +I D + ++ + D+ KL + M V N ++ +C G
Sbjct: 329 LLSYNFVI------DGLCKSGNV-DDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRL 381
Query: 412 TEA-DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
++A LL E PD TY L +K + + LL+ M+ G PN
Sbjct: 382 SQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPN 435
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 123/289 (42%), Gaps = 41/289 (14%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L K+ + Q ++ M+ + + D Y+ LI K G + A L EM+
Sbjct: 371 LISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAV 430
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC+P+ Y ALI + K +A F +M + C P+I+TYN +L A ++A
Sbjct: 431 GCKPNVVTYAALINGYA----KHGMYEEAESLFDEMSA-KGCFPDIITYNTVLSAFSKAG 485
Query: 235 NVDQVNALFKELHE--SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+ + ++++L S +PD TY ++D Y + ++ ++L M + D T
Sbjct: 486 MMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYT 545
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N+LI L ++E P+ KA V+Q+M
Sbjct: 546 YNVLI----------------AKLAETEEVPS------------------KALAVYQQML 571
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
PS + ++ ++ +V+ AR + E+++ G + S L A+
Sbjct: 572 DQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKGHLVDASNLEAL 620
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 47/114 (41%)
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M A Y S +TY +I ++ A+ + +++ G V T A+++ C
Sbjct: 1 MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
P +A + G PD TY L AN + +L+ + +NG PN
Sbjct: 61 PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPN 114
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 156/371 (42%), Gaps = 41/371 (11%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E++ M DT YS LI+ GK G A+ LF EM+ +G P +Y L+
Sbjct: 219 EIYNEMCNDGNCFPDTVTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGI 278
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ K + KAL ++MK + C + TY ++ +A VD +F ++ +
Sbjct: 279 YF----KLDKVEKALDVIKEMKD-KGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKD 333
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN--------------- 294
PD+ N +++ GK G ++ + +M+S QCKP+++T+N
Sbjct: 334 GCKPDVVLINSLINILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASE 393
Query: 295 ---------------------LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
+LID + K +K + + + P + S+I
Sbjct: 394 AASWFEKMKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLIN 453
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
+ GK + A +F ++ S Y +I +G C +S A ++F+E+ KLG
Sbjct: 454 SLGKVKRYEAANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKP 513
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
V NA++ G+ EA L G +PD +++ ++ + + + ++
Sbjct: 514 DVYAYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMF 573
Query: 454 KRMEQNGIVPN 464
+M+ + I P+
Sbjct: 574 AKMKSSIIKPD 584
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 161/355 (45%), Gaps = 7/355 (1%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
K DK + L+V + M K + Y++ I +GK G+ A +F +M GC+PD
Sbjct: 281 KLDKVEKALDVIKEM-KDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDV 339
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN-VDQV 239
+ N+LI + K L L F+KM+ + CKPN+VTYN +++A + + +
Sbjct: 340 VLINSLI----NILGKVGRLEVTLKLFRKMESWQ-CKPNVVTYNTVIKALFECKAPASEA 394
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
+ F+++ +AP +TY+ ++D + K I++ +L M P + LI+S
Sbjct: 395 ASWFEKMKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINS 454
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
GK + ++ ++F L + + + MI ++GK +A +F +M + P
Sbjct: 455 LGKVKRYEAANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPD 514
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
Y +++ + A+ + + + G +++ N +L G+P A +F
Sbjct: 515 VYAYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFA 574
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
+ + PD+ +Y + + A + E KL++ M G N + LE
Sbjct: 575 KMKSSIIKPDAVSYNTVLGCLSHAGLFEEAAKLMREMNLKGFEYNNITYTSILEA 629
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 149/339 (43%), Gaps = 10/339 (2%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMW--LFSEMRNSGCRPDPSVYNAL 186
++ F+W K+R + D+ + LI + + G MW + +R+S C SVY +
Sbjct: 111 IQFFKWAGKRRNFEHDSSSFMALIHSLDEAGFYG-EMWKTIQDMVRSSTCVIS-SVYLSE 168
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I L KAK + KAL F ++KG +CKP TYN ++ Q ++++V+ ++ E+
Sbjct: 169 IVKLL---GKAKMVNKALSVFYQIKG-RKCKPAATTYNSMILMLKQEGHLEKVHEIYNEM 224
Query: 247 -HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
++ PD TY+ ++ A+GK G + MK N P + L+ Y K
Sbjct: 225 CNDGNCFPDTVTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDK 284
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+K V K + T+ T+ I GKA A VF M P +
Sbjct: 285 VEKALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINS 344
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP-TEADLLFENSHNM 424
+I + G + ++F ++ V T N +++A P +EA FE
Sbjct: 345 LINILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGC 404
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
G+ P S TY +L + K N E LL+ M++ G P
Sbjct: 405 GIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPP 443
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 139/313 (44%), Gaps = 7/313 (2%)
Query: 149 SKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQ 208
S+++ ++GK A+ +F +++ C+P + YN++I L + + L K +
Sbjct: 167 SEIVKLLGKAKMVNKALSVFYQIKGRKCKPAATTYNSMI---LMLKQEGH-LEKVHEIYN 222
Query: 209 KMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
+M C P+ VTY+ L+ A + + D LF E+ E+ L P Y ++ Y K
Sbjct: 223 EMCNDGNCFPDTVTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKL 282
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
+++ V+ MK C + T+ I GK D +VF ++ KP +
Sbjct: 283 DKVEKALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLI 342
Query: 329 NSMIINYGK-ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN-VSRAREIFDEL 386
NS+I GK RL+ + +F+KM + + P+ +TY +I C S A F+++
Sbjct: 343 NSLINILGKVGRLEVTLK-LFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKM 401
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
G T + +++ +C +A LL E G P + Y L + K
Sbjct: 402 KGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRY 461
Query: 447 ELVQKLLKRMEQN 459
E +L +++N
Sbjct: 462 EAANELFLELKEN 474
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 114/248 (45%), Gaps = 9/248 (3%)
Query: 130 EVFRWMQKQRWY-IADTGI-YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
E W +K + IA + YS LI K + A+ L EM G P P+ Y +LI
Sbjct: 393 EAASWFEKMKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLI 452
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV-TYNILLRACAQARNVDQVNALFKEL 246
++ K K A F ++K E C + Y ++++ + + + LF E+
Sbjct: 453 ----NSLGKVKRYEAANELFLELK--ENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEM 506
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
+ PD+Y YN +M + GMI E +S+L M N C PD+ + N++++ +
Sbjct: 507 EKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVP 566
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
D+ ++F + S KP ++N+++ A L +A + ++M + + ITY I
Sbjct: 567 DRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGLFEEAAKLMREMNLKGFEYNNITYTSI 626
Query: 367 ITMYGYCD 374
+ G D
Sbjct: 627 LEAVGKVD 634
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 133/321 (41%), Gaps = 40/321 (12%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
LGK+ + VF M K D + + LI ++GK G+ + + LF +M + C+P
Sbjct: 314 LGKAGRVDDAYRVFLDMIKDGCK-PDVVLINSLINILGKVGRLEVTLKLFRKMESWQCKP 372
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
+ YN +I A + A ++A +F+KMKG P+ TY+IL+ + +++
Sbjct: 373 NVVTYNTVIKALFECKAPA---SEAASWFEKMKGC-GIAPSSFTYSILIDGFCKTNRIEK 428
Query: 239 V-----------------------------------NALFKELHESILAPDIYTYNGVMD 263
N LF EL E+ Y ++
Sbjct: 429 ALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVYAVMIK 488
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+GK G + E + + M+ KPD+ +N L+ + D+ + + +++ + P
Sbjct: 489 HFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMDENGCSP 548
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
L + N ++ + + +A +F KM + P ++Y ++ + A ++
Sbjct: 549 DLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGLFEEAAKLM 608
Query: 384 DELSKLGKDMKVSTLNAMLEA 404
E++ G + T ++LEA
Sbjct: 609 REMNLKGFEYNNITYTSILEA 629
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 86/213 (40%), Gaps = 2/213 (0%)
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
D ++ ++ + + G EM + M +S+ C + + ++ GK + +K V
Sbjct: 126 DSSSFMALIHSLDEAGFYGEMWKTIQDMVRSSTCVISSVYLSEIVKLLGKAKMVNKALSV 185
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM-TAMKYTPSFITYECIITMYG 371
F + K KP T+NSMI+ + K ++ +M P +TY +I+ +G
Sbjct: 186 FYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFG 245
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ A +FDE+ + G +L Y +A + + + G T
Sbjct: 246 KLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVF 305
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
TY K KA + ++ M ++G P+
Sbjct: 306 TYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPD 338
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 73/188 (38%), Gaps = 35/188 (18%)
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY-GKARLQGKAEYV 347
D +F LI S + + +M + + ++ S + S I+ GKA++ KA V
Sbjct: 126 DSSSFMALIHSLDEAGFYGEMWKTIQDMVRSSTCVISSVYLSEIVKLLGKAKMVNKALSV 185
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F ++ K P+ TY +I M ++ + EI++E+ C
Sbjct: 186 FYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEM-------------------CN 226
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
+G PD+ TY L A+ K + +L M++NG+ P +
Sbjct: 227 DG---------------NCFPDTVTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKI 271
Query: 468 FLEALETF 475
+ L +
Sbjct: 272 YTTLLGIY 279
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 171/437 (39%), Gaps = 53/437 (12%)
Query: 71 GRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVV--RSEHCFLL--FEELGKSDKWL 126
GR+S ES+ +V + R D Y+KV R + L+ F +G +
Sbjct: 64 GRRSTTSESETVVSLFNRMVRDC---------YIKVAPNRCTYSILIGCFCRMGHLEHGF 114
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
F + K W + I L + K L M GC PD YN L
Sbjct: 115 A---AFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNIL 171
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
+ + + +AL L + + C PN+V+Y+ ++ VD+ LF E+
Sbjct: 172 LKGLCNEKRAEEALE--LLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEM 229
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY---GKR 303
+ + PD+ TY V+D K + E+V +M N KP+I T+N LI Y GK
Sbjct: 230 MDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKW 289
Query: 304 QAFDKMEQ--------------------------------VFKSLMHSKEKPTLPTFNSM 331
+ +M + F S++ KP++ T+ M
Sbjct: 290 KEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIM 349
Query: 332 IINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGK 391
+ Y + + M A +P+ + + Y C + +A +IF+++ + G
Sbjct: 350 LHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGL 409
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
+ A+++A C G +A++ F N GVTPD + L + E V++
Sbjct: 410 SPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEE 469
Query: 452 LLKRMEQNGIVPNKRFF 468
L M GI PN FF
Sbjct: 470 LFFEMLNVGIHPNIVFF 486
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 145/320 (45%), Gaps = 9/320 (2%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA--HLHTRDKAKALAKAL 204
I++ + K G AM +F++MR G PD Y ALI A L D A+
Sbjct: 380 IFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEV----- 434
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
F +M E P+IV ++ L+ ++V LF E+ + P+I +N ++
Sbjct: 435 -KFNQMIN-EGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCN 492
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
K G + E + ++ ++ +PD+I++N LID + D+ ++ + ++ KP
Sbjct: 493 LCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPD 552
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
++N+++ Y KA A F+KM + TP +TY I+ S A+E++
Sbjct: 553 SFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYL 612
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ G + T N +L C + EA +F+N + G+ + T+ ++ A K
Sbjct: 613 NMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGG 672
Query: 445 MKELVQKLLKRMEQNGIVPN 464
KE L + NG+V N
Sbjct: 673 RKEDAMDLFAAIPANGLVQN 692
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 144/316 (45%), Gaps = 5/316 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI G+ + + + EM G +P+ Y +L+ +L + + +A +F
Sbjct: 276 YNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLN-YLCKNGRCR---EARFFF 331
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
M G + KP++ TY I+L A + +++ L + + ++P+ + +N AY K
Sbjct: 332 DSMIG-KGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAK 390
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G+I + + ++M+ PD +++ LID+ K D E F +++ P +
Sbjct: 391 CGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVV 450
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
F+S++ K E +F +M + P+ + + I+ V + + D +
Sbjct: 451 FSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIE 510
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+G V + N +++ +C+ G EA L E ++G+ PDS +Y L Y KA +
Sbjct: 511 CMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRID 570
Query: 448 LVQKLLKRMEQNGIVP 463
++M NGI P
Sbjct: 571 SAYSHFRKMLSNGITP 586
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 135/323 (41%), Gaps = 9/323 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ +I + K A +F +M ++G +P+ YN LI +L + K K + +
Sbjct: 237 DVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYL-SIGKWKEVVRM 295
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L ++M KPN TY LL + + F + + P + TY ++
Sbjct: 296 L---EEMSAGGP-KPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLH 351
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
Y G + EM +L+ M +N P+ FN+ +Y K DK +F + P
Sbjct: 352 GYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSP 411
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRARE 381
++ ++I K AE F +M TP + + ++ YG C D + E
Sbjct: 412 DAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLV--YGLCTVDKWEKVEE 469
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+F E+ +G + N +L C G E L ++ MGV PD +Y L +
Sbjct: 470 LFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHC 529
Query: 442 KANMKELVQKLLKRMEQNGIVPN 464
A + KLL+ M G+ P+
Sbjct: 530 LAGTIDEASKLLEGMVSVGLKPD 552
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 160/363 (44%), Gaps = 11/363 (3%)
Query: 109 SEHCF-LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWL 167
+ H F + F K + +++F M +Q+ D Y LI + K G+ A
Sbjct: 377 NHHIFNIFFSAYAKCGIIDKAMDIFNKM-RQQGLSPDAVSYGALIDALCKLGRVDDAEVK 435
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK-GMERCKPNIVTYN-I 225
F++M N G PD V+++L+ L T DK + + + +F+ + G+ PNIV +N I
Sbjct: 436 FNQMINEGVTPDIVVFSSLVYG-LCTVDKWEKVEEL--FFEMLNVGIH---PNIVFFNTI 489
Query: 226 LLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ 285
L C + R V + L + + PD+ +YN ++D + G I E +L M S
Sbjct: 490 LCNLCKEGR-VMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVG 548
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
KPD ++N L+ Y K D F+ ++ + P + T+N+++ + + +A+
Sbjct: 549 LKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAK 608
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
++ M TY I+ + V A ++F L G + + T N M+ A
Sbjct: 609 ELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGAL 668
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
G +A LF G+ + TY+L+ + + E L ME+NG PN
Sbjct: 669 LKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNS 728
Query: 466 RFF 468
+
Sbjct: 729 QML 731
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 136/329 (41%), Gaps = 39/329 (11%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYN 224
L+ M NSG + D YN ++ K+ + +A+ FQ + KG++ NI+T+N
Sbjct: 610 LYLNMINSGTKWDIYTYNIILNGLC----KSNCVDEAIKMFQNLCSKGLQL---NIITFN 662
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
I++ A + + LF + + L ++ TY V++ + G ++E +S+ S M+ N
Sbjct: 663 IMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKN 722
Query: 285 QCKPDIITFNLLIDSYGKRQAFDK----------------------MEQVFKSLMHSKEK 322
P+ N L+ R + + +F S +
Sbjct: 723 GTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHA 782
Query: 323 PTLPTFNSMIINYG-------KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
+LP I+N KAR A +F++M TP +TY I+
Sbjct: 783 KSLPK-KYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGR 841
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
S A+E++ + M + T N +L C + EA +F++ + G+ + T+ +
Sbjct: 842 FSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNI 901
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ A K KE L + NG+VP+
Sbjct: 902 MIGALLKGGRKEDAMDLFAAIPANGLVPD 930
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 108/259 (41%), Gaps = 23/259 (8%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA------------------KALGYFQ 208
LFS M +G P+ + NAL+ LH D ++A A + F
Sbjct: 715 LFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFS 774
Query: 209 KMKGMERCKPNIVTYNILLRA-----CAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ K Y IL A +AR +D +LF+E+ L PD+ TYN ++
Sbjct: 775 SDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILH 834
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ G E + + M +++ + +I T+N++++ K D+ ++F+SL +
Sbjct: 835 GLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQL 894
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ TFN MI K + A +F + A P +TY + ++ +F
Sbjct: 895 NIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLF 954
Query: 384 DELSKLGKDMKVSTLNAML 402
+ K G + LNA++
Sbjct: 955 LTMEKSGTPLDSRLLNALV 973
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/382 (19%), Positives = 144/382 (37%), Gaps = 58/382 (15%)
Query: 123 DKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSV 182
DKW + E+F M + + ++ ++ + K+G+ L + G RPD
Sbjct: 462 DKWEKVEELFFEMLNVGIH-PNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVIS 520
Query: 183 YNALITAH-------------------------------LHTRDKAKALAKALGYFQKMK 211
YN LI H LH KA + A +F+KM
Sbjct: 521 YNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKML 580
Query: 212 GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMI 271
P +VTYN +L Q + + L+ + S DIYTYN +++ K+ +
Sbjct: 581 S-NGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCV 639
Query: 272 KEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM 331
E + + S + +IITFN++I + K + +F ++ + + T+ +
Sbjct: 640 DEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLV 699
Query: 332 IINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGK 391
+ N + + + +F M P+ ++ + ++SRA +L +
Sbjct: 700 VENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNF 759
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
++ ST + ++ + + E H+ P Y+ +AN L++K
Sbjct: 760 SVEASTTSMLISIFSSD----------EYQHHAKSLPKK------YRILNEANSSALIKK 803
Query: 452 ---------LLKRMEQNGIVPN 464
L + M G+ P+
Sbjct: 804 ARRIDDAYSLFREMLMKGLTPD 825
>gi|255661214|gb|ACU25776.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 426
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 143/308 (46%), Gaps = 7/308 (2%)
Query: 134 WMQK--QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
W+QK Q D +YS LI + K A+ +FS+++ SG PD YN++I
Sbjct: 31 WLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSKLKRSGITPDLVAYNSMINVF- 89
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KA+ +A +M+ + PN V+Y+ LL + + + ++F E+ E
Sbjct: 90 ---GKARLFREARSLISEMR-VAGVMPNTVSYSTLLTMYVENKRFREALSVFAEMREIKC 145
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
D+ T N ++D YG+ M KE + + M+ +P+++++N L+ YG + F +
Sbjct: 146 LLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIH 205
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+F+ + + T+N+M++ YGK KA + Q+M P+ ITY II+++G
Sbjct: 206 LFRLMQRKDIVQNVVTYNTMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWG 265
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ RA +F +L G ++ M+ AY GL A L P +
Sbjct: 266 KVGKLDRAAMLFQKLRVSGIEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPNNIPRDT 325
Query: 432 TYKLLYKA 439
+L A
Sbjct: 326 AIHILAGA 333
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 151/320 (47%), Gaps = 5/320 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS LI GK+G A+ +M D +Y+ LI D +KA++
Sbjct: 8 DRYTYSTLITHFGKEGLFDGALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAIS-- 65
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F K+K P++V YN ++ +AR + +L E+ + + P+ +Y+ ++
Sbjct: 66 --IFSKLK-RSGITPDLVAYNSMINVFGKARLFREARSLISEMRVAGVMPNTVSYSTLLT 122
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
Y +N +E SV + M+ +C D+ T N++ID YG+ + +++F + +P
Sbjct: 123 MYVENKRFREALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKMGIEP 182
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ ++N+++ YG A L G+A ++F+ M + +TY ++ +YG +A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIVQNVVTYNTMMMIYGKTLEHEKANNLI 242
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
E+ G + T + ++ + G A +LF+ G+ D Y+ + AY +A
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRVSGIEIDQVLYQTMIVAYERA 302
Query: 444 NMKELVQKLLKRMEQNGIVP 463
+ ++LL +++ +P
Sbjct: 303 GLVAHAKRLLHELKRPNNIP 322
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 107/214 (50%)
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
L+PD YTY+ ++ +GK G+ S L +M+ ++ D++ ++ LI+ K + K
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDGALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 64
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+F L S P L +NSMI +GKARL +A + +M P+ ++Y ++TMY
Sbjct: 65 SIFSKLKRSGITPDLVAYNSMINVFGKARLFREARSLISEMRVAGVMPNTVSYSTLLTMY 124
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
A +F E+ ++ + ++T N M++ Y + EAD LF MG+ P+
Sbjct: 125 VENKRFREALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKMGIEPNV 184
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+Y L + Y A + L + M++ IV N
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKDIVQN 218
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 142/315 (45%), Gaps = 9/315 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS L+ + + + R A+ +F+EMR C D + N +I + D AK K
Sbjct: 117 YSTLLTMYVENKRFREALSVFAEMREIKCLLDLTTCNIMIDVYGQL-DMAKEADKLFWGM 175
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+KM G+E PN+V+YN LLR A + LF+ + + ++ TYN +M YGK
Sbjct: 176 RKM-GIE---PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIVQNVVTYNTMMMIYGK 231
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
++ +++ M++ +P+ IT++ +I +GK D+ +F+ L S +
Sbjct: 232 TLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRVSGIEIDQVL 291
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ +MI+ Y +A L A+ + ++ P+ I + I + + A +F +
Sbjct: 292 YQTMIVAYERAGLVAHAKRLLHELK----RPNNIPRDTAIHILAGAGRIEEATWVFRQAI 347
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G+ ++ M+ + T +FE +G PDS+ ++ AY K + E
Sbjct: 348 DAGEVKDITVFERMISLFSKYKKYTNVVEVFEKMRGLGYFPDSNVIAVVLNAYGKLHKFE 407
Query: 448 LVQKLLKRMEQNGIV 462
+ M+ G V
Sbjct: 408 NANGVYMEMQDEGCV 422
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 142/301 (47%), Gaps = 10/301 (3%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
I++ L++ KG+ A + +EM GC PD +Y +LI T + +A
Sbjct: 540 IFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFST----GRVPEARHV 595
Query: 207 FQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
F M KG C P+ +TY +++ ++ NV+ + + + +S + PD + YN +MD
Sbjct: 596 FDSMIEKG---CAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDG 652
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-KP 323
Y K + + V RM ++ KP+ +TFN+L+ K D+ +FK ++ E P
Sbjct: 653 YVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPP 712
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
TL ++ +I GKA +A FQ+M P TY +I + A+++
Sbjct: 713 TLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLV 772
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+++ KLG + V +A++ + + A +F+ G P+ TYK+L + + A
Sbjct: 773 EDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAA 832
Query: 444 N 444
Sbjct: 833 G 833
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 138/324 (42%), Gaps = 11/324 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I + + A LF +++ +GC P+ Y A+I L KA + L F
Sbjct: 366 YTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLL----KAGRIEDGLKNF 421
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ M G C P TY +++ +A+ + +F+++ + PD TY ++D + K
Sbjct: 422 EDMSG-SSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSK 480
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ E +L M + +P +T+ ++ + K ++ ++V + +P L
Sbjct: 481 ASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFI 540
Query: 328 FNSMIINYGKARLQGKAEYVFQ---KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
F S++ Y +G+AE +Q +MTA P I Y +I + V AR +FD
Sbjct: 541 FTSLLSYYLS---KGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFD 597
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ + G T +++ + G A + E GV PD Y L Y K
Sbjct: 598 SMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLE 657
Query: 445 MKELVQKLLKRMEQNGIVPNKRFF 468
+ + RM +GI PN F
Sbjct: 658 RVDQAFGVYDRMVASGIKPNAVTF 681
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 161/372 (43%), Gaps = 30/372 (8%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
+LG+ D L+ L + ++ + D Y+ L+A + + A+ LF + + GC+
Sbjct: 276 KLGRVDDGLKLL--LQMVECDNF--PDIQTYNILVAGFSRANRLDDALELFKLLSSYGCK 331
Query: 178 PDPSVYNALITAHLHTR--DKAKA-----------------------LAKALGYFQKMKG 212
P+ + Y +I + ++AKA + +A F+K+K
Sbjct: 332 PNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLK- 390
Query: 213 MERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIK 272
C PN+V Y ++ +A ++ F+++ S P TY V+D K M+
Sbjct: 391 TAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLP 450
Query: 273 EMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
+ V +M C PD IT+ LID + K D+ ++ ++ +PT T+ S++
Sbjct: 451 DACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIV 510
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKD 392
+ K + +A+ V +M P + +++ Y A ++ E++ G
Sbjct: 511 HGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCA 570
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
V ++++ G EA +F++ G PD+ TY + + ++K E ++
Sbjct: 571 PDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEI 630
Query: 453 LKRMEQNGIVPN 464
L+ M ++G+ P+
Sbjct: 631 LELMAKSGVGPD 642
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 158/386 (40%), Gaps = 17/386 (4%)
Query: 93 KEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLI 152
+E + R Y++V S L+F L K+ K + E+++ + ++ + Y+ L+
Sbjct: 218 REMIERGYEPYLEVQDS----LIFA-LCKAGKVDEANEIYQTVVAKKVATSRVA-YNSLM 271
Query: 153 AVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKG 212
K G+ + L +M PD YN L+ +A L AL F K+
Sbjct: 272 DGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGF----SRANRLDDALELF-KLLS 326
Query: 213 MERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIK 272
CKPN TY +++ A+ +++ A F E A D+ +Y V+ + I
Sbjct: 327 SYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDE------ALDVISYTTVIKGLADSKRID 380
Query: 273 EMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
E + ++K+ C P+++ + +ID K + + F+ + S PT T+ +I
Sbjct: 381 EACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVI 440
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKD 392
KA++ A VF++M P ITY +I + + AR++ D + G +
Sbjct: 441 DGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPE 500
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
T +++ +C + EA + G P + L Y E ++
Sbjct: 501 PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQV 560
Query: 453 LKRMEQNGIVPNKRFFLEALETFSSS 478
L M G P+ + ++ S+
Sbjct: 561 LTEMTARGCAPDVILYTSLIDLLFST 586
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 167/395 (42%), Gaps = 31/395 (7%)
Query: 111 HCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSE 170
+C ++ L K+ K + +E+F M Y+ +I+ + + A F+
Sbjct: 22 NCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVS-YNTVISGLASIDKMDEAYKFFNS 80
Query: 171 MRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRAC 230
M ++GC PD + LI KA +G+ + ++R +P++ Y ++
Sbjct: 81 MIDNGCEPDVIAFTTLIHGF------CKAGQPQVGHMLLNQALKRFRPDVFLYTSVIHGY 134
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
+A ++D + +E+ + PD Y ++D K G + E + RM+ + C D
Sbjct: 135 CKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDY 194
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
+TF LI++ D+ ++++ ++ +P L +S+I KA +A ++Q
Sbjct: 195 VTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQT 254
Query: 351 MTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
+ A K S + Y + M GYC V ++ ++ + + T N ++ +
Sbjct: 255 VVAKKVATSRVAYNSL--MDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRA 312
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+A LF+ + G P+++TY + + A +RME+ K FF
Sbjct: 313 NRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDA----------QRMEE-----AKAFF 357
Query: 469 LEALETFS-----SSLAGSQSGSAKTDLTRSLSTA 498
EAL+ S LA S+ +L L TA
Sbjct: 358 DEALDVISYTTVIKGLADSKRIDEACELFEKLKTA 392
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 122/319 (38%), Gaps = 10/319 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I + K A +F +M GC PD Y LI KA + +A
Sbjct: 436 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGF----SKASKMDEARKLL 491
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
M KG E P VTY ++ + +++ + ++ E P ++ + ++ Y
Sbjct: 492 DVMLTKGPE---PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYY 548
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
G +E VL+ M + C PD+I + LID + VF S++ P
Sbjct: 549 LSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDA 608
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+ ++I N+ K A + + M P Y ++ Y + V +A ++D
Sbjct: 609 LTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDR 668
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF-ENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ G T N ++ +G A LF E V P +Y +L KA
Sbjct: 669 MVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAG 728
Query: 445 MKELVQKLLKRMEQNGIVP 463
+ M GI+P
Sbjct: 729 RVSEAFSQFQEMIDRGIIP 747
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 101/224 (45%), Gaps = 6/224 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y +I K G A + M SG PD YN+L+ ++ K + + +A
Sbjct: 607 DALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYV----KLERVDQA 662
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE-LHESILAPDIYTYNGVM 262
G + +M KPN VT+N+L+ + D+ +LFKE L + + P + +Y ++
Sbjct: 663 FGVYDRMVA-SGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILI 721
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D GK G + E S M P+ T+ LI S K + +++ + ++
Sbjct: 722 DGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVN 781
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
P + ++++I + + A VFQ+M P+ +TY+ +
Sbjct: 782 PDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 825
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 84/410 (20%), Positives = 159/410 (38%), Gaps = 37/410 (9%)
Query: 113 FLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMR 172
F+L + L K + + E+F M+K + D + LI + G+ A L+ EM
Sbjct: 163 FVLIDPLCKLGRVDEAYELFERMRKSGC-LGDYVTFMTLIEALSNHGKLDEACELYREMI 221
Query: 173 NSGCRPDPSVYNALITA-----------HLHTRDKAKALAKA-LGYFQKMKG-------- 212
G P V ++LI A ++ AK +A + + Y M G
Sbjct: 222 ERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVD 281
Query: 213 --------MERCK--PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
M C P+I TYNIL+ ++A +D LFK L P+ TY ++
Sbjct: 282 DGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTII 341
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
++E ++ D+I++ +I + D+ ++F+ L +
Sbjct: 342 QGLYDAQRMEEAKAFFDE------ALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCS 395
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P + + ++I KA F+ M+ P+ TY +I + A ++
Sbjct: 396 PNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKV 455
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
F+++ + G T +++ + EA L + G P + TY + + K
Sbjct: 456 FEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCK 515
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLT 492
+M ++++ +M + G P F L + S ++ T++T
Sbjct: 516 LDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMT 565
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 87/214 (40%), Gaps = 7/214 (3%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P++V NI+L +AR +D+ LF E+ P I +YN V+ + E
Sbjct: 18 PDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKF 77
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK---PTLPTFNSMIIN 334
+ M N C+PD+I F LI + K QV L++ K P + + S+I
Sbjct: 78 FNSMIDNGCEPDVIAFTTLIHGFCKA----GQPQVGHMLLNQALKRFRPDVFLYTSVIHG 133
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
Y KA + ++M A P Y +I V A E+F+ + K G
Sbjct: 134 YCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGD 193
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
T ++EA +G EA L+ G P
Sbjct: 194 YVTFMTLIEALSNHGKLDEACELYREMIERGYEP 227
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 96/223 (43%), Gaps = 5/223 (2%)
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
KE+H + L PD+ N V++ K I + + M S C+P I+++N +I
Sbjct: 8 LKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLAS 67
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
D+ + F S++ + +P + F ++I + KA Q + ++ ++ P
Sbjct: 68 IDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAG-QPQVGHMLLNQALKRFRPDVFL 126
Query: 363 YECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
Y +I +GYC ++ +I +E+ G + +++ C G EA LFE
Sbjct: 127 YTSVI--HGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFER 184
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
G D T+ L +A + + +L + M + G P
Sbjct: 185 MRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEP 227
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + LGK+ + + F+ M R I + Y+ LI + K G+ A L +M
Sbjct: 719 ILIDGLGKAGRVSEAFSQFQEM-IDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVK 777
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNIL---LRA 229
G PD Y+ALIT + + + A FQ+M M+R C PN VTY +L RA
Sbjct: 778 LGVNPDVQAYSALITGLIDS----SMVDTAWDVFQEM--MKRGCAPNEVTYKVLRRGFRA 831
Query: 230 CAQARNVDQVNALFKE 245
+A +++ V F +
Sbjct: 832 AGRALDLEAVKQHFSQ 847
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 89/210 (42%), Gaps = 7/210 (3%)
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
++E L M + PD++ N++++ K + DK ++F + +PT+ ++N+
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDE-LS 387
+I +A F M P I + +I +G+C + ++ L
Sbjct: 61 VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLI--HGFCKAGQPQVGHMLLNQALK 118
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ D+ + T +++ YC G + E G PD++ Y +L K +
Sbjct: 119 RFRPDVFLYT--SVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVD 176
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
+L +RM ++G + + F+ +E S+
Sbjct: 177 EAYELFERMRKSGCLGDYVTFMTLIEALSN 206
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 9/163 (5%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
LF++ GK+D+ +F+ M ++ Y+ LI +GK G+ A F EM +
Sbjct: 688 LFKD-GKTDRAFS---LFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDR 743
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P+ Y +LI ++ KA + +A + M + P++ Y+ L+ +
Sbjct: 744 GIIPECHTYTSLI----YSLAKAGRIPEAKKLVEDMVKL-GVNPDVQAYSALITGLIDSS 798
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
VD +F+E+ + AP+ TY + + G ++E+V
Sbjct: 799 MVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAV 841
>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 401
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 147/332 (44%), Gaps = 14/332 (4%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG--CRPDPSVYNALITAHLHTRDK 196
R I D Y+ L+ + + +++ A+ L M + G C PD Y+ +I D
Sbjct: 45 RRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDL 104
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
K L +R PN+VTYN ++ A +A+ VD+ + + +S + PD
Sbjct: 105 DKMLD------------QRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCM 152
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TYN ++ + +G KE L +M+S+ +PD++T+N L+D K + ++F S+
Sbjct: 153 TYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSM 212
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
KP + T+ +++ Y + + M P+ + ++ Y + V
Sbjct: 213 TKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKV 272
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
A +F ++ + G + T +++ C +G +A L FE + G+ PDS Y L
Sbjct: 273 EEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSL 332
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+ + E ++L M GI + FF
Sbjct: 333 IHSLCIFDKWEKAEELFLEMLDRGICLSTIFF 364
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 129/285 (45%), Gaps = 5/285 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +IA + K AM + + M SG PD YN+++ + +A+ +
Sbjct: 119 YNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIV----FL 174
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+KM+ + +P++VTYN L+ + + +F + + L PDI TY ++ Y
Sbjct: 175 KKMRS-DGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYAT 233
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + EM +L M N P+ F++L+ +Y K++ ++ VF + P T
Sbjct: 234 KGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVT 293
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ ++I K+ A F++M P I Y +I D +A E+F E+
Sbjct: 294 YGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEML 353
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
G + N++++++C G E+ LF+ +GV PD T
Sbjct: 354 DRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT 398
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 141/331 (42%), Gaps = 19/331 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + ++GQ R A+ + +M GC PD YN L+ +A K GY
Sbjct: 10 YNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILL----------EATCKGRGYR 59
Query: 208 QKMKGM-----ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
Q M+ + E C PN VTYN+L+ +VD L + L P YN V+
Sbjct: 60 QAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVL 119
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+ + +++ M C P+ TFN++I S ++ + Q+ + +
Sbjct: 120 KGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCT 179
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV--SRAR 380
+ T+N++I + R A + KM + P +TY ++ G C A
Sbjct: 180 ANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLK--GLCSAARWVDAE 237
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
E+ D +++ G T N ++ C GL +A +F+ + G TP+S TY +
Sbjct: 238 ELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGL 297
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
KA + +L M G P+K + L A
Sbjct: 298 AKATKLDQALELFNEMGHKGFNPDKIYQLLA 328
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 125/290 (43%), Gaps = 9/290 (3%)
Query: 177 RPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
+P+ YN LI HT + + AL M C P++VTYNILL A + R
Sbjct: 4 QPNAYTYNPLI----HTLCERGQVRDALSVLDDML-CRGCAPDVVTYNILLEATCKGRGY 58
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
Q L + P+ TYN +MD G + + +L + S+ CKP + +N +
Sbjct: 59 RQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTV 118
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
+ + + +++ ++ P TFN +I + + L +A + +KM+
Sbjct: 119 LKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGC 178
Query: 357 TPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
T + +TY II G C+ NV A + ++ G + T N +L+ C +A
Sbjct: 179 TANIVTYNAIIN--GLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDA 236
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ L +N G PD+ T+ L + + ++ K+M G PN
Sbjct: 237 EELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPN 286
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 151/370 (40%), Gaps = 35/370 (9%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
R D Y+ L+ K R AM L MR GC P+ YN L+ D
Sbjct: 36 RGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDD 95
Query: 199 AL------------AKALGYFQKMKGM------------------ERCKPNIVTYNILLR 228
AL + Y +KG+ E C PN T+N+++
Sbjct: 96 ALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIY 155
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
+ + + Q L +++ + +I TYN +++ + + +LS+MKS CKP
Sbjct: 156 SLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKP 215
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
DI+T+N L+ + E++ ++ + P TFN++I + L A VF
Sbjct: 216 DIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVF 275
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
++M TP+ ITY II+ + +A E+F+E+ K + +L A C+N
Sbjct: 276 KQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGH--KGFNPDKIYQLL-AECLN 332
Query: 409 GLPT--EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
T EA + G++P + Y + + E ++ M +G +P+
Sbjct: 333 DDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDL 392
Query: 467 FFLEALETFS 476
++ +E +
Sbjct: 393 TYVILIEGLA 402
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 124/294 (42%), Gaps = 12/294 (4%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
L +EM C P+ + +N +I ++ + L +A+ +KM C NIVTYN +
Sbjct: 134 LVTEMLRENCPPNEATFNVVI----YSLCRKGLLQQAIQLLEKMS-KHGCTANIVTYNAI 188
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+ + RNVD L ++ PDI TYN ++ + E ++ M N C
Sbjct: 189 INGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGC 248
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
PD +TFN LI ++ +VFK + P T++++I KA +A
Sbjct: 249 LPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALE 308
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+F +M + P I Y+ + D + A + +L G NA+L C
Sbjct: 309 LFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLC 367
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLL-----YKAYTKANMKELVQKLLKR 455
NG A + + G PD TY +L Y+ Y +EL+ KL R
Sbjct: 368 RNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLN-EARELLIKLCSR 420
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 89/185 (48%), Gaps = 7/185 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + L + +W+ E+ M Q + D ++ LI + +KG A+ +F +M +
Sbjct: 223 LLKGLCSAARWVDAEELMDNM-TQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDK 281
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC P+ Y+ +I+ KA L +AL F +M G + P+ + Y +L
Sbjct: 282 GCTPNSITYSTIISG----LAKATKLDQALELFNEM-GHKGFNPDKI-YQLLAECLNDDD 335
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+++ ++L +S ++P YN ++ +NG + +++ M S+ C PD +T+
Sbjct: 336 TIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYV 395
Query: 295 LLIDS 299
+LI+
Sbjct: 396 ILIEG 400
>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
Group]
gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
Length = 618
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 133/303 (43%), Gaps = 10/303 (3%)
Query: 165 MW-LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
+W LF EM G P YN LI A H D +AKA + +M R PN+VTY
Sbjct: 157 VWELFDEMLGRGMVPSVVTYNTLINACRHQGD----VAKAWEVWDQMVA-RRIDPNVVTY 211
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
++ A + + LF E+ E+ + P++YTYN +M ++ K IK +
Sbjct: 212 TTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLK 271
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
P+ + F LID + + + +F + + PT+P +NS+I ++ +
Sbjct: 272 CGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQE 331
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAM 401
A FQ++ P + C I + G CD + A + + + G + + N +
Sbjct: 332 ALAFFQEIIRKGLRPD--EFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVL 389
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
++ YC +G EA + +GV P+ TY L ++K E+ + M G+
Sbjct: 390 IDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGV 449
Query: 462 VPN 464
PN
Sbjct: 450 EPN 452
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/263 (19%), Positives = 117/263 (44%), Gaps = 4/263 (1%)
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+AL F +++ + P + N +L +A + +V LF E+ + P + TYN +
Sbjct: 124 EALSVFGRLREL----PALPACNAILDGLVKAHMLARVWELFDEMLGRGMVPSVVTYNTL 179
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
++A G + + V +M + + P+++T+ +I + + E +F + +
Sbjct: 180 INACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEMKEAGM 239
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
+P L T+N+++ ++ K A + + P+ + + +I + ++ A+
Sbjct: 240 RPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRITEAKN 299
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
IF ++ + V N+++ +G EA F+ G+ PD T ++ +
Sbjct: 300 IFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLC 359
Query: 442 KANMKELVQKLLKRMEQNGIVPN 464
++ + L+ M+Q+GI N
Sbjct: 360 DGGQMQVATRFLEVMQQSGIALN 382
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 126/299 (42%), Gaps = 9/299 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I + ++ A LF EM+ +G RP+ YNAL+++H RD K AL ++
Sbjct: 211 YTTMICALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALMSSHF-KRDNIK---HALVFY 266
Query: 208 QKMKGMERCK--PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+ +C PN V + L+ QA + + +F ++ +AP + YN ++
Sbjct: 267 YDLL---KCGLVPNDVIFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGA 323
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
++G +E + + +PD T ++++ + + + S
Sbjct: 324 FRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNA 383
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
+N +I Y K+ +A +M+ + P+ +TY +I + + A I+ E
Sbjct: 384 AAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTE 443
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ G + V T A++ + NG A L + G+ ++ T +L + N
Sbjct: 444 MVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCREN 502
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 140/329 (42%), Gaps = 19/329 (5%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
I++ LI + + + A +F +M P VYN+LI H ++ +AL +
Sbjct: 280 IFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLI----HGAFRSGYAQEALAF 335
Query: 207 FQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
FQ++ KG+ +P+ T +I++R + + + +S +A + YN ++D
Sbjct: 336 FQEIIRKGL---RPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDE 392
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
Y K+G + E +RM +P+++T++ LID + K + ++ ++ +P
Sbjct: 393 YCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPN 452
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREI 382
+ T+ ++I + K A ++ ++M + IT ++ G C + V A
Sbjct: 453 VVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVD--GLCRENRVQDAVRF 510
Query: 383 FDELSKLGKDMKVSTLN------AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
E S K K ++ ++ ++G EA F + G+ PD TY L+
Sbjct: 511 IMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLV 570
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+ L M + G+ P K
Sbjct: 571 IRGLCMLGYVLNAMMLYADMVKVGVKPTK 599
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 100/242 (41%), Gaps = 3/242 (1%)
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
+L+ A +Q D+ ++F L E P + N ++D K M+ + + M
Sbjct: 110 GVLVIALSQMALPDEALSVFGRLRE---LPALPACNAILDGLVKAHMLARVWELFDEMLG 166
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
P ++T+N LI++ + K +V+ ++ + P + T+ +MI + G
Sbjct: 167 RGMVPSVVTYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGD 226
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
AE +F +M P+ TY +++ + DN+ A + +L K G +++
Sbjct: 227 AEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLID 286
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
C TEA +F + V P Y L ++ + + + + G+ P
Sbjct: 287 GLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRP 346
Query: 464 NK 465
++
Sbjct: 347 DE 348
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 138/323 (42%), Gaps = 18/323 (5%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADT-GIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
L + L ++++ + +F + R+ +A T +Y+ LI + G + A+ F E+
Sbjct: 284 LIDGLCQANRITEAKNIF--LDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIR 341
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G RPD +++ L + + + L Q+ G+ N YN+L+ ++
Sbjct: 342 KGLRPD-EFTCSIVVRGLCDGGQMQVATRFLEVMQQ-SGIAL---NAAAYNVLIDEYCKS 396
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
N+D+ + E + P++ TY+ ++D + KNG ++ ++ + M + +P+++T+
Sbjct: 397 GNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTY 456
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA-RLQGKAEYVFQKMT 352
LI + K D + K + T + ++ + R+Q ++ +
Sbjct: 457 TALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFIMEYSG 516
Query: 353 AMKY--TPSF---ITYECIITMYG-YCDN-VSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
K PS +TY +I YG Y D + A F + G T ++
Sbjct: 517 QKKSEKNPSIANSVTYMTLI--YGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGL 574
Query: 406 CMNGLPTEADLLFENSHNMGVTP 428
CM G A +L+ + +GV P
Sbjct: 575 CMLGYVLNAMMLYADMVKVGVKP 597
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 149/351 (42%), Gaps = 6/351 (1%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
L+ L KS K L ++ F I D Y+ ++ + K + + A+ L ++
Sbjct: 135 LVLHGLCKSGKVLAAMDHFETTTTNGCTI-DIHTYTAIVDWLAKNKKIQDAVALMEKITA 193
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
+GC P + YNAL L+ K L +A+ +K+ C P++VTY L+ +
Sbjct: 194 NGCTPTIATYNAL----LNGLCKMGRLEEAIDLLRKIVD-NGCTPDVVTYTSLIDGLGKE 248
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ + LFKE+ L D Y ++ + G I + SV M S C PD++T
Sbjct: 249 KRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTL 308
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+ +ID K ++FKS+ P ++++I KAR A + +M
Sbjct: 309 STMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 368
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
TP ITY +I +V AR FDE+ + G V T N ++ +C G
Sbjct: 369 AFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDA 428
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A +F++ + +P+ TY L K + M++ G P+
Sbjct: 429 ACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPD 479
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 145/320 (45%), Gaps = 10/320 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI +GK+ ++ A LF EM G D Y ALI L +A + +A
Sbjct: 234 DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLL----QAGKIPQA 289
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
++ M + C P++VT + ++ +A + +FK + LAP+ Y+ ++
Sbjct: 290 SSVYKTMTS-QGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIH 348
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K + +L++MK C PD IT+N+LID K + F ++ + KP
Sbjct: 349 GLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKP 408
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRARE 381
+ T+N ++ + KA A VF M++ +P+ +TY +I+ G C +++A
Sbjct: 409 DVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLIS--GLCKRRQLTKASL 466
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
F + + G +++++ C +G +LF+ GV + +L++
Sbjct: 467 YFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFH-LC 525
Query: 442 KANMKELVQKLLKRMEQNGI 461
KAN + L + + G+
Sbjct: 526 KANRVDEAVSLFNAIRKEGM 545
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 132/314 (42%), Gaps = 5/314 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + K G+ A+ L ++ ++GC PD Y +LI K K +A F
Sbjct: 203 YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDG----LGKEKRSFEAYKLF 258
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M + + V Y L+R QA + Q ++++K + PD+ T + ++D K
Sbjct: 259 KEM-ALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCK 317
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G I + M++ P+ + ++ LI K + D ++ + + P T
Sbjct: 318 AGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTIT 377
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N +I K+ A F +M P TY +++ + N A +FD++S
Sbjct: 378 YNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMS 437
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
V T ++ C T+A L F++ G PDS Y L K+ E
Sbjct: 438 SSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLE 497
Query: 448 LVQKLLKRMEQNGI 461
L ME++G+
Sbjct: 498 GGCMLFDEMERSGV 511
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 109/252 (43%), Gaps = 1/252 (0%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESI-LAPDIYTYNGVMDAYGKNGMIKEMES 276
P++ T+N+L+ AR ++ A+ +E+ E +AP + T+N V+ K+G +
Sbjct: 92 PDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMD 151
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+N C DI T+ ++D K + + + + + PT+ T+N+++
Sbjct: 152 HFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLC 211
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
K +A + +K+ TP +TY +I G A ++F E++ G +
Sbjct: 212 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTV 271
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
A++ G +A +++ + G PD T + KA ++ K M
Sbjct: 272 CYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSM 331
Query: 457 EQNGIVPNKRFF 468
E G+ PN+ +
Sbjct: 332 EARGLAPNEVVY 343
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 87/212 (41%), Gaps = 7/212 (3%)
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
++T N ++D + + +E ++L + PD+ T+N+LI Y + + E+ F
Sbjct: 59 VHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAR---EPEEAFA 115
Query: 315 SLMHSKEK----PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+ +E P+L T N ++ K+ A F+ T T TY I+
Sbjct: 116 VIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWL 175
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
+ A + ++++ G ++T NA+L C G EA L + G TPD
Sbjct: 176 AKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDV 235
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
TY L K KL K M G+V
Sbjct: 236 VTYTSLIDGLGKEKRSFEAYKLFKEMALRGLV 267
>gi|302772122|ref|XP_002969479.1| hypothetical protein SELMODRAFT_61155 [Selaginella moellendorffii]
gi|300162955|gb|EFJ29567.1| hypothetical protein SELMODRAFT_61155 [Selaginella moellendorffii]
Length = 489
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 156/358 (43%), Gaps = 16/358 (4%)
Query: 117 EELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGC 176
E L + W LE F W + ++ D YS +I V+G G LF EMR G
Sbjct: 5 EVLKRVRDWRVALEFFTWAKSVPFFKHDAMNYSMMIRVLGTCGNYTQGRKLFDEMREKGL 64
Query: 177 RPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK--GMERCKPNIVTYNILLRACAQAR 234
+PD N +I + A + A+ F++ G E P++ TY +L+ +A
Sbjct: 65 KPDLVTVNNMIKCY----GCANRVDDAMDLFREFPDFGFE---PDVCTYALLIDLLGKAG 117
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
V +V LF EL L PD Y +N ++ + K + + L MK +P +T+
Sbjct: 118 RVSEVRKLFLELQSRKLKPDEYVFNSMIANFSKWKDLGLADEALDYMKVCGIRPSTVTYA 177
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++++ Y K F E+++ ++S P L +N+ I+ +G A +AE+ + +
Sbjct: 178 IVLNMYAKSLNFMLAEKIYCEYLNSNLPPDLYVYNNAILFFGLAGRCREAEWAVEDIEKA 237
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY--CMNGLPT 412
P +Y II+ + A++ FD+ G NA+++AY ++ P
Sbjct: 238 GLVPDKFSYCTIISAWARQGCAPDAKKWFDKARSRGITPSPEMCNALIDAYIKALDLEPV 297
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
A + + GV TY L+ Y + KE V L M + G +K FLE
Sbjct: 298 AA--ILDAMPGWGVKATLQTYTYLFNYYCEC-CKEYVDLLRDYMRKTGHPADK--FLE 350
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 148/320 (46%), Gaps = 8/320 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + + LA+ F ++ +G R + + N L+ + +AL L
Sbjct: 114 YAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRT 173
Query: 208 QKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHE--SILAPDIYTYNGVMDA 264
++ C P++ +Y+ILL++ C Q ++ Q + L + + E ++ +PD+ Y+ V+D
Sbjct: 174 PELG----CVPDVFSYSILLKSLCDQGKS-GQADDLLRMMAEGGAVCSPDVVAYSTVIDG 228
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ K G + + + M PD +T++ ++ + K +A DK E + +++ P
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
T+N++I Y +A VF++M P +T ++ + AR++FD
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 348
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
++ G++ V + ML Y G + LF+ G+ PD T+ +L KAY
Sbjct: 349 TMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCG 408
Query: 445 MKELVQKLLKRMEQNGIVPN 464
M + + M +G+ P+
Sbjct: 409 MLDKAMIIFNEMRDHGVKPD 428
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 160/388 (41%), Gaps = 43/388 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIA-DTGIYSKLIAVMGKKGQTRLAMWLFSEMR 172
+L + L K Q ++ R M + + D YS +I K+G A LF EM
Sbjct: 187 ILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMV 246
Query: 173 NSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM---------------------- 210
G PD Y++++ H KA+A+ KA + ++M
Sbjct: 247 QRGIPPDFVTYSSVV----HALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSST 302
Query: 211 ----------KGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
K M R P++VT ++L+ + + + + +F + P++++Y
Sbjct: 303 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSY 362
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
+++ Y G + +M + M + PDI TFN+LI +Y DK +F +
Sbjct: 363 TIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRD 422
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS- 377
KP + T+ ++I + A F +M P Y C+I G+C + S
Sbjct: 423 HGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQ--GFCTHGSL 480
Query: 378 -RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A+E+ E+ G + + ++++ C G +A +F+ + N+G+ P + Y +L
Sbjct: 481 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSML 540
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y E ++ M GI PN
Sbjct: 541 MDGYCLVGKMEKALRVFDAMVSAGIEPN 568
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 140/335 (41%), Gaps = 5/335 (1%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E F + + + Y+ LI GQ + A+ +F EMR PD + L+ +
Sbjct: 274 EAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGS 333
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
K + +A F M M+ PN+ +Y I+L A + + LF +
Sbjct: 334 LC----KYGKIKEARDVFDTM-AMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGD 388
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+APDIYT+N ++ AY GM+ + + + M+ + KPD++T+ +I + + D
Sbjct: 389 GIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 448
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
+ F ++ P ++ +I + KA+ + ++ + + II
Sbjct: 449 MEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN 508
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
V A+ IFD +G + +++ YC+ G +A +F+ + G+ P+
Sbjct: 509 LCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 568
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y L Y K + L + M Q GI P+
Sbjct: 569 DVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS 603
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 143/344 (41%), Gaps = 6/344 (1%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
+ +W + + VF+ M++ + D S L+ + K G+ + A +F M G P+
Sbjct: 302 TGQWKEAVRVFKEMRRHSI-LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVF 360
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
Y ++ + L F M G + P+I T+N+L++A A +D+
Sbjct: 361 SYTIMLNGYA----TKGCLVDMTDLFDLMLG-DGIAPDIYTFNVLIKAYANCGMLDKAMI 415
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
+F E+ + + PD+ TY V+ A + G + + ++M PD ++ LI +
Sbjct: 416 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFC 475
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
+ K +++ +M++ + F+S+I N K A+ +F + P+ +
Sbjct: 476 THGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAV 535
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
Y ++ Y + +A +FD + G + ++ YC G E LF
Sbjct: 536 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREM 595
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
G+ P + Y ++ +A + M ++GI NK
Sbjct: 596 LQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNK 639
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 141/307 (45%), Gaps = 11/307 (3%)
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM-KGMERCKPNIVTYNILLRACAQA 233
GC PD Y+ L+ + D+ K+ +A + M +G C P++V Y+ ++ +
Sbjct: 177 GCVPDVFSYSILLKSLC---DQGKS-GQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKE 232
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+V++ LFKE+ + + PD TY+ V+ A K + + E+ L +M + P+ T+
Sbjct: 233 GDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTY 292
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM---IINYGKARLQGKAEYVFQK 350
N LI Y + + +VFK + P + T + + + YGK + +A VF
Sbjct: 293 NNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIK---EARDVFDT 349
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M P+ +Y ++ Y + ++FD + G + T N +++AY G+
Sbjct: 350 MAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGM 409
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
+A ++F + GV PD TY+ + A + + + +M G+ P+K +
Sbjct: 410 LDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 469
Query: 471 ALETFSS 477
++ F +
Sbjct: 470 LIQGFCT 476
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 123/278 (44%), Gaps = 9/278 (3%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
LF M G PD +N LI A+ + L KA+ F +M+ KP++VTY +
Sbjct: 381 LFDLMLGDGIAPDIYTFNVLIKAYAN----CGMLDKAMIIFNEMRD-HGVKPDVVTYRTV 435
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+ A + +D F ++ + +APD Y Y+ ++ + +G + + + ++S + +N
Sbjct: 436 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGM 495
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
DI+ F+ +I++ K + +F ++ PT ++ ++ Y KA
Sbjct: 496 HLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALR 555
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL--NAMLEA 404
VF M + P+ + Y ++ Y + +F E+ L K +K ST+ N +++
Sbjct: 556 VFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREM--LQKGIKPSTILYNIIIDG 613
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
G A + F G+ + TY ++ + K
Sbjct: 614 LFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFK 651
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 141/362 (38%), Gaps = 38/362 (10%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRD--KAKALA 201
D Y +IA + + G+ AM F++M + G PD Y+ LI KAK L
Sbjct: 428 DVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELI 487
Query: 202 KAL---------GYFQKMKGMERCK--------------------PNIVTYNILLRACAQ 232
+ +F + CK P V Y++L+
Sbjct: 488 SEIMNNGMHLDIVFFSSIIN-NLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCL 546
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+++ +F + + + P+ Y +++ Y K G I E S+ M KP I
Sbjct: 547 VGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTIL 606
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N++ID + + F + S T+N ++ K R +A ++F+++
Sbjct: 607 YNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELR 666
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
AM + IT +I V A+++F +S+ G V T + M+ GL
Sbjct: 667 AMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVE 726
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
EA+ +F + N G PDS + + K N L ++++ + F LE L
Sbjct: 727 EAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDE------RNFSLEHL 780
Query: 473 ET 474
T
Sbjct: 781 TT 782
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 87/172 (50%), Gaps = 9/172 (5%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
++G+ D+ L +FR M Q+ T +Y+ +I + + G+T A F EM SG
Sbjct: 581 KIGRIDEGLS---LFREML-QKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIA 636
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
+ YN ++ K + +A+ F++++ M K NI+T N ++ Q R V+
Sbjct: 637 MNKCTYNIVLRGLF----KNRCFDEAIFLFKELRAMN-VKINIITLNTMIAGMFQTRRVE 691
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
+ LF + S L P + TY+ ++ K G+++E E + S M++ C+PD
Sbjct: 692 EAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPD 743
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/193 (18%), Positives = 82/193 (42%), Gaps = 9/193 (4%)
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA-EYVFQK 350
T+ +L+D + + F L+ + + + N ++ + +A+ +A + + +
Sbjct: 113 TYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHR 172
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
+ P +Y I + CD ++ + D L + + V + + + + ++G
Sbjct: 173 TPELGCVPDVFSYS--ILLKSLCDQ-GKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGF 229
Query: 411 PTEADL-----LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
E D+ LF+ G+ PD TY + A KA + + L++M G++PN
Sbjct: 230 FKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNN 289
Query: 466 RFFLEALETFSSS 478
+ + +SS+
Sbjct: 290 WTYNNLIYGYSST 302
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 165/397 (41%), Gaps = 59/397 (14%)
Query: 99 TLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKK 158
LNK V VV C F + K+ K V M ++ DT YS++I +
Sbjct: 451 VLNK-VNVVSFARCLCGFGKFEKAYK------VIHEMMGN-GFVPDTSTYSEVIGFLCNA 502
Query: 159 GQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKP 218
+ A +LF EM+ +G PD Y LI KA + +A + +M + C+P
Sbjct: 503 SRVENAFFLFKEMKGTGVVPDVYTYTILIDCF----SKAGIIKQAHNWLDEMV-RDGCEP 557
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
+VTY L+ A +A+ V N LF+ + P++ TY ++D Y K+G I++ +
Sbjct: 558 TVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIY 617
Query: 279 SRMKSNQC----------------KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+RM+ + KP+++T+ L+D K + +++ +
Sbjct: 618 ARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCE 677
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P ++++I + KA +A+ VF KM Y P+ TY +I D + + + +
Sbjct: 678 PNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLI------DRLFKDKRL 731
Query: 383 FDELSKLGKDMKVSTLNAMLEAYC----------MNGLP-----TEADLLFENSHNMGVT 427
D+ + L+ MLE C ++GL EA L G
Sbjct: 732 ---------DLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCK 782
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
P+ TY + + KA + +L + M G PN
Sbjct: 783 PNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPN 819
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 162/402 (40%), Gaps = 53/402 (13%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+C + M + Y + T I++ L+ K A L +M C+P VYN L
Sbjct: 361 RCKRILSMMIAEGCYPSYT-IFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNIL 419
Query: 187 I---------------------------TAHLHTRDKAKALAKALGYFQKMKGMERC--- 216
I + + + A+ L F K + +
Sbjct: 420 IGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHE 479
Query: 217 ------KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
P+ TY+ ++ A V+ LFKE+ + + PD+YTY ++D + K G+
Sbjct: 480 MMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGI 539
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
IK+ + L M + C+P ++T+ LI +Y K + ++F+ ++ P + T+ +
Sbjct: 540 IKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTA 599
Query: 331 MIINYGK-----------ARLQGKAEY-----VFQKMTAMKYTPSFITYECIITMYGYCD 374
+I Y K AR++G A+ F+ + P+ +TY ++
Sbjct: 600 LIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAH 659
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
V AR++ + + G + +A+++ +C EA +F G P+ TY
Sbjct: 660 KVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYS 719
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
L K +LV K+L +M +N PN + E ++ S
Sbjct: 720 SLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLS 761
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 145/330 (43%), Gaps = 33/330 (10%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD--------------PSV--YNALITAHL 191
Y+ LI K G A +++ MR PD P+V Y AL+
Sbjct: 597 YTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLC 656
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KA + A + M ++ C+PN + Y+ L+ +A +D+ +F ++ E
Sbjct: 657 ----KAHKVKDARDLLETM-FVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGY 711
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
P++YTY+ ++D K+ + + VLS+M N C P+I+ + +ID K D+ +
Sbjct: 712 NPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYK 771
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+ + KP + T+ +MI +GKA K +F++M + P+F+TY +I
Sbjct: 772 LMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLI---- 827
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC--MNGLPTEADL---LFENSHNMGV 426
N A DE L ++MK + + +YC + G E L L E G
Sbjct: 828 ---NHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGS 884
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
P YK+L + KA E+ +L K +
Sbjct: 885 APIILLYKVLIDNFVKAGRLEVALELHKEV 914
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 175/428 (40%), Gaps = 38/428 (8%)
Query: 60 CC---VWTRPRSKRGR------KSEELESKELVRVLMRSFS-DKEPLVRTLNKYVKVVRS 109
CC +W + GR K + LV+V +R+ D LV + +
Sbjct: 216 CCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMD 275
Query: 110 EHCFLLFEE-LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLF 168
E F + L K KW + L + ++ ++ +T +Y+K+I+ + + AM
Sbjct: 276 EFTLGFFAQALCKVGKWREALSLI----EKEDFVPNTILYNKMISGLCEASFFEEAMDFL 331
Query: 169 SEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGM---ERCKPNIVTYNI 225
+ MR++ C P+ Y L+ L+ K LG +++ M E C P+ +N
Sbjct: 332 NRMRSTSCIPNVQTYRILLCGCLNK--------KQLGRCKRILSMMIAEGCYPSYTIFNS 383
Query: 226 LLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMI------KEMESVLS 279
L+ A ++ + L K++ + P YN ++ + G + + E +
Sbjct: 384 LVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYN 443
Query: 280 RMKSNQC---KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
M S K ++++F + +GK F+K +V +M + P T++ +I
Sbjct: 444 EMLSAGTVLNKVNVVSFARCLCGFGK---FEKAYKVIHEMMGNGFVPDTSTYSEVIGFLC 500
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
A A ++F++M P TY +I + + +A DE+ + G + V
Sbjct: 501 NASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVV 560
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
T ++ AY + A+ LFE G P+ TY L Y K+ E ++ RM
Sbjct: 561 TYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARM 620
Query: 457 EQNGIVPN 464
+ +P+
Sbjct: 621 RGDADIPD 628
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 154/365 (42%), Gaps = 39/365 (10%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
I + Y L+ K Q + S M GC P +++N+L+ A+ + D + A
Sbjct: 340 IPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYA-- 397
Query: 202 KALGYFQKMKGMERC--KPNIVTYNILLRA-CAQARNVDQVN-ALFKELHESILAP---- 253
++ +K ME+C KP V YNIL+ + C+ V L ++ + +L+
Sbjct: 398 -----YKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVL 452
Query: 254 ---DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
++ ++ + +GK ++ V+ M N PD T++ +I +
Sbjct: 453 NKVNVVSFARCLCGFGK---FEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAF 509
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+FK + + P + T+ +I + KA + +A +M P+ +TY +I Y
Sbjct: 510 FLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAY 569
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG-----------------LPTE 413
VS A E+F+ + G V T A+++ YC +G +P +
Sbjct: 570 LKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIP-D 628
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
D+ F+ +N+ P+ TY L KA+ + + LL+ M +G PN + ++
Sbjct: 629 VDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALID 688
Query: 474 TFSSS 478
F +
Sbjct: 689 GFCKA 693
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/408 (19%), Positives = 159/408 (38%), Gaps = 49/408 (12%)
Query: 128 CLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
C++ F W +Q Y +Y L+ V + R+ E+R D V L+
Sbjct: 154 CVKFFLWAGRQIGYDHTPAVYIALLDVFERGSYDRVPEEFLREIRGD----DKEVLGKLL 209
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
+ + AL ++K KP +TYN L++ +A +D + +E+
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGY-KPTRMTYNALVQVFLRADKLDTAQLVHREMS 268
Query: 248 ESILAPDIYT--------------------------------YNGVMDAYGKNGMIKEME 275
E L+ D +T YN ++ + +E
Sbjct: 269 ELGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAM 328
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
L+RM+S C P++ T+ +L+ ++ + +++ ++ P+ FNS++ Y
Sbjct: 329 DFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAY 388
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK------L 389
K+ A + +KM + P ++ Y +I C + EL++ L
Sbjct: 389 CKSDDFSYAYKLLKKMEKCECKPGYVVYNILIG--SICSGGELPGPVTFELAEKAYNEML 446
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM---GVTPDSSTYKLLYKAYTKANMK 446
++ +N + A C+ G + + ++ H M G PD+STY + A+
Sbjct: 447 SAGTVLNKVNVVSFARCLCGF-GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRV 505
Query: 447 ELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTRS 494
E L K M+ G+VP+ + ++ FS + Q+ + ++ R
Sbjct: 506 ENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRD 553
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 147/330 (44%), Gaps = 6/330 (1%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQR-WYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMR 172
+EL S + L +VF + R + G++ L +V + G A FS M
Sbjct: 150 FFLKELISSRRILPGFDVFEVLWSTRNVCVPGFGVFDALFSVFIELGMLEEAGQCFSRMT 209
Query: 173 NSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
P NA + L K K +F+ M G + ++ TYNI++ +
Sbjct: 210 RFRVFPKARSCNAFLY-RLAKTGKGDLSNK---FFRDMVGAGIAQ-SVFTYNIMIGYMCK 264
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
++ +LF ++ + L PDI TYN ++D YGK G++ E + MK C+PD+IT
Sbjct: 265 EGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVIT 324
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N LI+ + K + K + +S KP + T++++I K + +A M
Sbjct: 325 YNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMR 384
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ +P+ TY +I +S A ++ DE+ ++ V T +L+ C G
Sbjct: 385 RVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMM 444
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
EA+ LF GVTP+ TY L + K
Sbjct: 445 EAEDLFRAMIKAGVTPNLKTYTALVHGHIK 474
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 150/365 (41%), Gaps = 41/365 (11%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
KQ D Y+ LI GK G + LF EM++ GC PD YNALI K
Sbjct: 279 KQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFC----K 334
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+ + KA + +MK KPN+VTY+ L+ A + + Q ++ L+P+ +
Sbjct: 335 YEQMPKAFHFLHEMKN-SGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEF 393
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TY ++DA K G + + + M Q +++T+ L+D K + E +F+++
Sbjct: 394 TYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAM 453
Query: 317 MHSKEKPTLPTFNSMIINYGKAR----------------------LQG------------ 342
+ + P L T+ +++ + K + L G
Sbjct: 454 IKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKL 513
Query: 343 -KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
+ E+V +M A + + Y + Y A + E+ LG ++ + T +
Sbjct: 514 EECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVL 573
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDS-STYKLLYKAYTKANMKELVQKLLKRMEQNG 460
++ C GL EA F + + P++ + L K N E +KL M+
Sbjct: 574 IDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKN 633
Query: 461 IVPNK 465
+VP+K
Sbjct: 634 MVPDK 638
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 92/443 (20%), Positives = 183/443 (41%), Gaps = 35/443 (7%)
Query: 57 TGICCVWTRPRSKRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLF 116
TG C+ P + +L+ +++++ + + VR ++ + + +
Sbjct: 46 TGFLCILRFPFITQSSFLGQLDKASIIKIIQQDQWNDPKFVRFIDSSLGPIWVSRVLV-- 103
Query: 117 EELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS-- 174
EL + K L+ FRW + + + T Y L+ ++ A + E+ +S
Sbjct: 104 -ELKQDPKL--ALKFFRWAKTKFGFCLTTESYCLLVHILFYARMYFDANFFLKELISSRR 160
Query: 175 ----------------GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKP 218
C P V++AL + + + L +A F +M R P
Sbjct: 161 ILPGFDVFEVLWSTRNVCVPGFGVFDALFSVFI----ELGMLEEAGQCFSRMTRF-RVFP 215
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
+ N L A+ D N F+++ + +A ++TYN ++ K G + +S+
Sbjct: 216 KARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLF 275
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
+MK PDI+T+N LID YGK D+ +F+ + +P + T+N++I + K
Sbjct: 276 HQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKY 335
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
KA + +M P+ +TY +I + +A + ++ ++G T
Sbjct: 336 EQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTY 395
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
++++A C G ++A L + + V + TY L K + L + M +
Sbjct: 396 TSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIK 455
Query: 459 NGIVPNKRFFLEALETFSSSLAG 481
G+ PN L+T+++ + G
Sbjct: 456 AGVTPN-------LKTYTALVHG 471
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 133/329 (40%), Gaps = 16/329 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + K+G+ A LF M +G P+ Y AL+ H+ + AL
Sbjct: 430 YTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIK 489
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+K KP+++ Y ++ +++ + E+ + + Y MDAY K
Sbjct: 490 EKKI-----KPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFK 544
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT-LP 326
G E ++L M + I+TF +LID K+ ++ F + +P +
Sbjct: 545 TGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVA 604
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
++I K A+ +F +M P I Y +I + A I +
Sbjct: 605 VCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRM 664
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS-TYKLLYKAYTKANM 445
S+LG ++ + +++ L +A + G+ PD +LL K Y ++
Sbjct: 665 SELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSI 724
Query: 446 KELVQ---KLLKR------MEQNGIVPNK 465
E ++ +LLK+ +E+ ++P K
Sbjct: 725 DEAIELHDELLKKVPLDELLEEQNLMPEK 753
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 99/246 (40%), Gaps = 6/246 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +Y +I + + + ++ SEM+ G R + +Y + A+ K +A
Sbjct: 496 DLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYF----KTGKTVEA 551
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD-IYTYNGVM 262
L Q+M + + IVT+ +L+ + V++ F + + L P+ + ++
Sbjct: 552 LNLLQEMCDL-GVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALI 610
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D KN I+ + + M+ PD I + LID K + F + + + +
Sbjct: 611 DGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGME 670
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
L + S++ + L +A +M P I ++ Y ++ A E+
Sbjct: 671 LDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIEL 730
Query: 383 FDELSK 388
DEL K
Sbjct: 731 HDELLK 736
>gi|410110101|gb|AFV61130.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
viburnoides]
Length = 337
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 133/273 (48%), Gaps = 6/273 (2%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ +FS ++ SG PD YNA+I KAK +A +MK PN +Y
Sbjct: 6 AISIFSRLKRSGFTPDLVAYNAMINVF----GKAKLFREARSLIGEMKA-AGVMPNTASY 60
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
+ LL + + + ++F E+ E D+ T N ++D YG+ GM KE + + M+
Sbjct: 61 STLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 120
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+P+++++N L+ YG + F + +F+ + + + T+NSM++ YGK K
Sbjct: 121 MGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEK 180
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A + Q+M + P+ ITY II+++G + RA +F +L G ++ M+
Sbjct: 181 ANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIV 240
Query: 404 AYCMNGLPTEAD-LLFENSHNMGVTPDSSTYKL 435
AY GL A LL E + D++ + L
Sbjct: 241 AYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL 273
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 129/263 (49%), Gaps = 1/263 (0%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+KA+ F ++K P++V YN ++ +A+ + +L E+ + + P+ +Y+
Sbjct: 4 SKAISIFSRLK-RSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTASYST 62
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ Y +N E SV S M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 63 LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 122
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P + ++N+++ YG A L G+A ++F+ M + +TY ++ +YG +A
Sbjct: 123 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 182
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ E+ G + T + ++ + G A +LF+ + G D ++ + AY
Sbjct: 183 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAY 242
Query: 441 TKANMKELVQKLLKRMEQNGIVP 463
+A + ++LL +++ +P
Sbjct: 243 ERAGLVAHAKRLLHELKRPDNIP 265
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 148/331 (44%), Gaps = 15/331 (4%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L EM+ +G P+ + Y+ L+T ++
Sbjct: 14 KRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTASYSTLLTMYVEN--- 70
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
K +AL F +M+ + +C ++ T NI++ Q + + LF + + + P++
Sbjct: 71 -KKFLEALSVFSEMREI-KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVV 128
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+YN ++ YG + E + M+ + +++T+N ++ YGK +K + + +
Sbjct: 129 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEM 188
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P T++++I +GK +A +FQK+ + I ++ +I Y V
Sbjct: 189 QSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGLV 248
Query: 377 SRAREIFDELSK---LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ A+ + EL + + +D + L G EA +F + + G D + +
Sbjct: 249 AHAKRLLHELKRPDNIPRDTAIHILAG-------AGRIEEATYVFRQAIDAGEVKDITVF 301
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ + +K V ++ +M G P+
Sbjct: 302 ERMIHLLSKYKKYSNVVEVFDKMRGLGYFPD 332
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 76/159 (47%)
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+ K +F L S P L +N+MI +GKA+L +A + +M A P+ +Y
Sbjct: 3 YSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTASYST 62
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
++TMY A +F E+ ++ + ++T N M++ Y G+ EAD LF MG
Sbjct: 63 LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 122
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ P+ +Y L + Y A + L + M++ I N
Sbjct: 123 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 161
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 86/189 (45%)
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
S+ SR+K + PD++ +N +I+ +GK + F + + + + P ++++++ Y
Sbjct: 8 SIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTASYSTLLTMY 67
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
+ + +A VF +M +K T +I +YG A ++F + K+G + V
Sbjct: 68 VENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 127
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+ N +L Y L EA LF + + TY + Y K E L++
Sbjct: 128 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 187
Query: 456 MEQNGIVPN 464
M+ GI PN
Sbjct: 188 MQSRGIEPN 196
>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 804
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 170/397 (42%), Gaps = 52/397 (13%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + + KS K L++F M QR + + Y+ +I+ + + + +A LF M++
Sbjct: 201 ILIDGMCKSGKTQNALQMFDEMT-QRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKD 259
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALG---YFQK-------------MKGMERC- 216
GC PD YNAL LH K + +ALG YF+K + G+ R
Sbjct: 260 HGCIPDSVTYNAL----LHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRAR 315
Query: 217 -----------------KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
KP+++ Y I+++ ++A L E+ E L PD + YN
Sbjct: 316 RFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYN 375
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
++ Y G++ E +S+ + N C T+ +LI + +Q+F +
Sbjct: 376 ALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKH 435
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI-----------TYECIIT 368
P++ TFN++I + KA KA+ +F KM + F+ T
Sbjct: 436 GCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTM 495
Query: 369 MYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
+ CD+ + +A I +L+ G + T N ++ +C G A LF+ G+
Sbjct: 496 VEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGL 555
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
+PDS TY L AN +E +L ++ +NG P
Sbjct: 556 SPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTP 592
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 144/346 (41%), Gaps = 10/346 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + K D + +E F M K D Y+ ++ VM +K LA+ +++ M
Sbjct: 131 VLIQAYAKMDMIEKAVESFE-MMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLK 189
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
C P+ + ++ LI K+ AL F +M R PN +TY I++ QA
Sbjct: 190 LNCLPNIATFSILIDGMC----KSGKTQNALQMFDEMT-QRRILPNKITYTIIISGLCQA 244
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ D LF + + PD TYN ++ + K G + E +L + ++ D +
Sbjct: 245 QKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGY 304
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+ LID + + F+ + ++ + KP + + M+ KA A + +MT
Sbjct: 305 SCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTE 364
Query: 354 MKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P Y +I GYCD + A+ + E+SK T ++ C +GL
Sbjct: 365 RGLVPDTHCYNALIK--GYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLV 422
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
+A +F G P T+ L + KA E Q L +ME
Sbjct: 423 GDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKME 468
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 137/331 (41%), Gaps = 5/331 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ LI K A+ F M++ C+PD YN + LH + + + ALG +
Sbjct: 129 FTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTV----LHVMVRKEVVLLALGIY 184
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M + C PNI T++IL+ ++ +F E+ + + P+ TY ++ +
Sbjct: 185 NRMLKLN-CLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQ 243
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ MK + C PD +T+N L+ + K D+ + K +
Sbjct: 244 AQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQG 303
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
++ +I +AR A+ ++KMT P I Y ++ A + +E++
Sbjct: 304 YSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMT 363
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ G NA+++ YC GL EA L + TY +L ++ +
Sbjct: 364 ERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVG 423
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
Q++ ME++G P+ F ++ F +
Sbjct: 424 DAQQIFNEMEKHGCYPSVVTFNALIDGFCKA 454
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 122/291 (41%), Gaps = 59/291 (20%)
Query: 133 RWMQKQRWY--------IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
R+ Q WY D +Y+ ++ + K G+ + A+ L +EM G PD YN
Sbjct: 316 RFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYN 375
Query: 185 ALITAH--LHTRDKAKAL----------AKALGYFQKMKGMER----------------- 215
ALI + L D+AK+L + A Y + GM R
Sbjct: 376 ALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKH 435
Query: 216 -CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT-----YNGVMDAYG--- 266
C P++VT+N L+ +A N+++ LF ++ E P ++ N V+D
Sbjct: 436 GCYPSVVTFNALIDGFCKAGNIEKAQLLFYKM-EIGRNPSLFLRLSQGANRVLDTASLQT 494
Query: 267 ------KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
+G+I + ++L ++ + P+IIT+N+LI + K + ++FK L
Sbjct: 495 MVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKG 554
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP------SFITYEC 365
P T+ ++I A + A V ++ TP SF+T+ C
Sbjct: 555 LSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSC 605
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 108/281 (38%), Gaps = 39/281 (13%)
Query: 221 VTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSR 280
V++N+++ + + + KE+ + + ++ AY K MI++
Sbjct: 92 VSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEM 151
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
MK CKPD+ T+N ++ +++ ++ ++ P + TF+ +I K+
Sbjct: 152 MKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGK 211
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
A +F +MT + P+ ITY II+ A +F + G T NA
Sbjct: 212 TQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNA 271
Query: 401 MLEAYCMNGLPTEA-----------------------DLLFE--------------NSHN 423
+L +C G EA D LF HN
Sbjct: 272 LLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHN 331
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ PD Y ++ K +KA + +LL M + G+VP+
Sbjct: 332 --IKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPD 370
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 149/358 (41%), Gaps = 44/358 (12%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ +I + ++GQ A LF EM + G P+ YN L LH + +A
Sbjct: 205 DVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCL----LHGYCSSGKPKEA 260
Query: 204 LGYFQKM--KGMERCKPNIVTYNILL-RACAQARNVD----------------------- 237
+G F+KM G+E P++VTYN L+ C R+++
Sbjct: 261 IGIFRKMCRDGVE---PDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTL 317
Query: 238 -----------QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
Q++ L + + PD Y +N ++ AY K+GM+ E S+M+
Sbjct: 318 LHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGL 377
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
P+I+T+ ++D+ + D F L+ P F ++I KAE
Sbjct: 378 HPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEE 437
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+ +M P+ I + ++ V+RA+ IFD + ++ V T +++ YC
Sbjct: 438 LAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYC 497
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
++G EA L E GV P+ TY + Y K E L ++M G+ P
Sbjct: 498 LDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPG 555
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 137/321 (42%), Gaps = 5/321 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D I++ LI K G AM FS+MR G P+ Y ++ A + + A
Sbjct: 345 DHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALC----RVGKVDDA 400
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ F ++ E PN V + L+ D+ L E+ + P+ +N +++
Sbjct: 401 MSQFDRLIS-EGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLN 459
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K GM+ +++ M + D+IT+ LID Y D+ ++ + ++ KP
Sbjct: 460 HLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKP 519
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T+N++I Y K A +F++M + P + Y I+ ++ A+E++
Sbjct: 520 NEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELY 579
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ K G + + T N +L+ C N +A +F N + + T+ ++ A K
Sbjct: 580 LWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKG 639
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+ + L + G+VPN
Sbjct: 640 GRHDEAKDLFASLLARGLVPN 660
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 144/343 (41%), Gaps = 22/343 (6%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
S K + + +FR M + D Y+ L+ + K G++ A +F M G +PD S
Sbjct: 254 SGKPKEAIGIFRKMCRD-GVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSS 312
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGM------ERCKPNIVTYNILLRACAQARN 235
+Y L+ + GY +M + +P+ +NIL+ A A+
Sbjct: 313 IYGTLLHGY-----------ATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGM 361
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
VD+ F ++ + L P+I TY VMDA + G + + S R+ S P+ + F
Sbjct: 362 VDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRT 421
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
LI +DK E++ ++ P FN+++ + K + +A+ +F M +
Sbjct: 422 LIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVD 481
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
ITY +I Y V A ++ + + G T N ++ YC NG +A
Sbjct: 482 VQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDAC 541
Query: 416 LLFENSHNMGVTPDSSTYKL----LYKAYTKANMKELVQKLLK 454
LF + GV P Y L++ A KEL ++K
Sbjct: 542 SLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIK 584
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 141/359 (39%), Gaps = 48/359 (13%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEM----RNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
Y+ L+ + + +++ A+ L M GC PD Y +I L + L KA
Sbjct: 170 YNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLL----REGQLDKA 225
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
F +M +GM PN +TYN LL + + +F+++ + PD+ TYN +
Sbjct: 226 YCLFDEMLDQGMS---PNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTL 282
Query: 262 MDAYGKNG-----------MIK------------------------EMESVLSRMKSNQC 286
M KNG M+K +M +L M N
Sbjct: 283 MVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGT 342
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
+PD FN+LI +Y K D+ F + P + T+ +++ + A
Sbjct: 343 QPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMS 402
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
F ++ + TP+ + + +I CD +A E+ E+ G N +L C
Sbjct: 403 QFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLC 462
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
G+ T A +F+ + V D TY L Y + KLL+ M +G+ PN+
Sbjct: 463 KEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNE 521
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 146/362 (40%), Gaps = 16/362 (4%)
Query: 108 RSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWL 167
R+ H L F LG+ V R + A +S L+ + +T AM +
Sbjct: 108 RAGHLDLAFAALGR---------VIR-----TGWTAQAITFSPLLKGLCHDKRTSDAMDI 153
Query: 168 -FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
M GC P+ YN L+ L ++++ L C P++V+Y +
Sbjct: 154 ALRRMPALGCTPNAFSYNILLKG-LCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTV 212
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+ + +D+ LF E+ + ++P+ TYN ++ Y +G KE + +M +
Sbjct: 213 INGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGV 272
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
+PD++T+N L+ K + +VF S++ KP + +++ Y +
Sbjct: 273 EPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQ 332
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+ M P + +I Y V A F ++ + G + T +++A C
Sbjct: 333 LLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALC 392
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
G +A F+ + G+TP+ ++ L + + ++L M GI PN
Sbjct: 393 RVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTI 452
Query: 467 FF 468
FF
Sbjct: 453 FF 454
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 121/275 (44%), Gaps = 14/275 (5%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
A AL F +M + C TY+I++ C++A ++D A + + T++
Sbjct: 82 AVALSLFNRMPRADLC-----TYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSP 136
Query: 261 VMDAYGKNGMIKE-MESVLSRMKSNQCKPDIITFNLLI----DSYGKRQAFDKMEQVFKS 315
++ + + M+ L RM + C P+ ++N+L+ D +QA + +
Sbjct: 137 LLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMAD 196
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
P + ++ ++I + KA +F +M +P+ ITY C+ ++GYC +
Sbjct: 197 DTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCL--LHGYCSS 254
Query: 376 --VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
A IF ++ + G + V T N ++ C NG EA +F++ G PDSS Y
Sbjct: 255 GKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIY 314
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
L Y + +LL M +NG P+ F
Sbjct: 315 GTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIF 349
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 79/192 (41%), Gaps = 17/192 (8%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
D Y+ LI G+ A L M G +P+ YN +I + K +
Sbjct: 484 CDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYC----KNGRIED 539
Query: 203 ALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
A F++M KG+ P IV Y+ +L Q R + L+ + + + I TYN
Sbjct: 540 ACSLFRQMASKGVN---PGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNI 596
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDII----TFNLLIDSYGKRQAFDKMEQVFKSL 316
++ +N + RM N C D TFN++ID+ K D+ + +F SL
Sbjct: 597 ILQGLCQNNCTDDA----LRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASL 652
Query: 317 MHSKEKPTLPTF 328
+ P + T+
Sbjct: 653 LARGLVPNVVTY 664
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 5/152 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I K G+ A LF +M + G P +Y+ ++ TR A A K L +
Sbjct: 524 YNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAA--KELYLW 581
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
G+ K I TYNI+L+ Q D +F L T+N ++DA K
Sbjct: 582 MIKCGI---KLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLK 638
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
G E + + + + + P+++T+ L++ S
Sbjct: 639 GGRHDEAKDLFASLLARGLVPNVVTYWLMMKS 670
>gi|384247929|gb|EIE21414.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 448
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 173/407 (42%), Gaps = 52/407 (12%)
Query: 80 KELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQ--- 136
++L+R+ +RS +E V +++ + + S L +EL K + E+F W++
Sbjct: 4 EDLLRI-VRSLPPEESAVAAVSRGLFYLDSRALAALLKELHKVGLSNRASELFDWLRSLP 62
Query: 137 --KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR 194
+ ++ D Y+ +I+ G Q R A+ L +EMR G + Y+AL+ +
Sbjct: 63 DNHELAHLCDVYTYTTIISQCGSHQQLRKALELVAEMRGHGVVCNVHTYSALMNVCI--- 119
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
KA L AL + ++ E C PN+VTYNIL+ + N + + L + P+
Sbjct: 120 -KANELELALDVYGQLL-REGCTPNLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPE 177
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
+ TYN ++ A ++G + V RM ++ +P T+ LI +YGK K+E+ +
Sbjct: 178 VRTYNTILSACNRSGQPEHALRVYERMLADGAQPTATTYTALISAYGKT---GKIEEALR 234
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
+FQ M + ITY +I+ C+
Sbjct: 235 --------------------------------IFQDMVRRGCERNVITYSSLISA---CE 259
Query: 375 NVSR---AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
R A E+ DE+ + T NA+L A G A +FE + G PD+
Sbjct: 260 KAGRWQLALELLDEMHRDNCKPNTVTFNALLSACAQGGQWKAAQDVFEQMPSCGCKPDAV 319
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+Y +L A+ + N + L M+ G P+ + +E + S
Sbjct: 320 SYAILISAFDRGNQWCRALQALDEMQGQGHRPDVGVYNVVIEALTRS 366
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 107/245 (43%), Gaps = 36/245 (14%)
Query: 80 KELVRVLMRSFSDK--EPLVRTLNKYVKVV----RSEHCFLLFEEL-------------- 119
+E V+VL + D+ +P VRT N + + EH ++E +
Sbjct: 160 QEAVQVL-DALEDQGTKPEVRTYNTILSACNRSGQPEHALRVYERMLADGAQPTATTYTA 218
Query: 120 -----GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
GK+ K + L +F+ M + R + YS LI+ K G+ +LA+ L EM
Sbjct: 219 LISAYGKTGKIEEALRIFQDMVR-RGCERNVITYSSLISACEKAGRWQLALELLDEMHRD 277
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
C+P+ +NAL++A + A F++M CKP+ V+Y IL+ A +
Sbjct: 278 NCKPNTVTFNALLSACA----QGGQWKAAQDVFEQMPSC-GCKPDAVSYAILISAFDRGN 332
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM----IKEMESVLSRMKSNQCKPDI 290
+ E+ PD+ YN V++A ++G+ +K + + + Q + D
Sbjct: 333 QWCRALQALDEMQGQGHRPDVGVYNVVIEALTRSGVLSAQLKAAQIFQAATRQGQLRCDA 392
Query: 291 ITFNL 295
+ NL
Sbjct: 393 ASANL 397
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 147/330 (44%), Gaps = 10/330 (3%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
IY+ LI K+G+ A LF EM G + Y LI H K +
Sbjct: 200 IYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLI----HGLFKNGIKKQGFEM 255
Query: 207 FQKMKGMERCKPNIVTYNILL-RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
++KM+ + PN+ TYN ++ + C R D LF E+ E ++ +I TYN ++
Sbjct: 256 YEKMQ-EDGVFPNLYTYNCVMNQHCKDGRTKDAFK-LFDEMRERGVSCNIVTYNTLIGGL 313
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ E V+ +MKS+ P++IT+N LID + K + + L P+L
Sbjct: 314 CREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSL 373
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+N ++ + K A V ++M PS ITY +I + DN+ +A ++
Sbjct: 374 VTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSP 433
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ +LG V T + ++ +C+ G EA LF+ + P+ Y + Y K
Sbjct: 434 MEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGS 493
Query: 446 KELVQKLLKRMEQNGIVPNK---RFFLEAL 472
+L + ME+ + PN R+ +E L
Sbjct: 494 SYRALRLFREMEEKELPPNVASYRYMIEVL 523
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 142/315 (45%), Gaps = 10/315 (3%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
Q E++ MQ+ + + Y+ ++ K G+T+ A LF EMR G + YN L
Sbjct: 251 QGFEMYEKMQEDGVF-PNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTL 309
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I L KA K + +MK + PN++TYN L+ + + +L ++L
Sbjct: 310 IGG-LCREMKANEANKVM---DQMKS-DGINPNLITYNTLIDGFCGVGKLGKALSLCRDL 364
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
L+P + TYN ++ + K G V+ M+ KP IT+ +LID++ +
Sbjct: 365 KSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNM 424
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+K Q+ + P + T++ +I + +A +F+ M A K P+ + Y +
Sbjct: 425 EKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTM 484
Query: 367 ITMYGYCDNVS--RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
+ GYC S RA +F E+ + V++ M+E C EA+ L E +
Sbjct: 485 V--LGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDT 542
Query: 425 GVTPDSSTYKLLYKA 439
G+ P S L+ +A
Sbjct: 543 GIDPSDSILNLISRA 557
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 144/330 (43%), Gaps = 21/330 (6%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+A+ Y+ LI + K G + ++ +M+ G P+ YN ++ H K
Sbjct: 230 VANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHC----KDGRTK 285
Query: 202 KALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
A F +M+ ER NIVTYN L+ + ++ N + ++ + P++ TYN
Sbjct: 286 DAFKLFDEMR--ERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNT 343
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++D + G + + S+ +KS P ++T+N+L+ + K+ +V K +
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERG 403
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
KP+ T+ +I + + KA + M + TP TY +I +G+C +
Sbjct: 404 IKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLI--HGFC-----IK 456
Query: 381 EIFDELSKLGKDMKVSTL-------NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+E S+L K M L N M+ YC G A LF + P+ ++Y
Sbjct: 457 GQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASY 516
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
+ + + K + + L+++M GI P
Sbjct: 517 RYMIEVLCKERKSKEAEGLVEKMIDTGIDP 546
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 144/311 (46%), Gaps = 10/311 (3%)
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
F+EM + G P + +N L+T + + + + +F + K + ++ ++ I++
Sbjct: 117 FNEMVDKGFVPGSNCFNNLLTFVV----GSSSFNQWWRFFNESK--IKVDLDVYSFGIVI 170
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
+ C +A +++ L EL E +P++ Y ++D K G I++ + + M
Sbjct: 171 KGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLV 230
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
+ T+ +LI K + ++++ + P L T+N ++ + K A +
Sbjct: 231 ANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKL 290
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNV--SRAREIFDELSKLGKDMKVSTLNAMLEAY 405
F +M + + +TY +I G C + + A ++ D++ G + + T N +++ +
Sbjct: 291 FDEMRERGVSCNIVTYNTLIG--GLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGF 348
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
C G +A L + + G++P TY +L + K K++K ME+ GI P+K
Sbjct: 349 CGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSK 408
Query: 466 RFFLEALETFS 476
+ ++TF+
Sbjct: 409 ITYTILIDTFA 419
>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
Length = 637
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 153/340 (45%), Gaps = 13/340 (3%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ L VFR + W + + ++ + K ++R A LF EM G P YN L
Sbjct: 129 EALYVFRRL----WTLPALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTL 184
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I A + A+AKA + +M + PN++TY ++ + + LF +
Sbjct: 185 INACRYQ----GAVAKAQEMWDQMVA-RQIDPNVITYTSMICVLCEEGCIGDAERLFDAM 239
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
E+ + P+ YTYN +M + + + + + ++ P+ + F LID + K + F
Sbjct: 240 KEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRF 299
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ + +F+ + PT+P +NS++ ++ +A ++Q+MT + P + C
Sbjct: 300 SEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPD--EFTCS 357
Query: 367 ITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
I + G CD + A + + + G ++ + NA+++ YC NG EA +
Sbjct: 358 IVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEV 417
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
GV P+ +Y L ++K ++ + M GI PN
Sbjct: 418 GVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPN 457
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 3/202 (1%)
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
+L+ + + D+ VF+ L P LP N+++ KAR A +F +M
Sbjct: 113 ALGVLVIALSQMGLLDEALYVFRRLW---TLPALPACNAVLDGLVKARRSRCAWELFDEM 169
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
PS +TY +I Y V++A+E++D++ D V T +M+ C G
Sbjct: 170 LRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCI 229
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
+A+ LF+ G+ P+ TY +L + + + L + + +G++PN F
Sbjct: 230 GDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTL 289
Query: 472 LETFSSSLAGSQSGSAKTDLTR 493
++ F + S++ D+ R
Sbjct: 290 IDGFCKAKRFSEAKDMFRDMPR 311
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 104/244 (42%), Gaps = 7/244 (2%)
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
+L+ A +Q +D+ +F+ L P + N V+D K + + M
Sbjct: 115 GVLVIALSQMGLLDEALYVFRRLWT---LPALPACNAVLDGLVKARRSRCAWELFDEMLR 171
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
P ++T+N LI++ + A K ++++ ++ + P + T+ SMI + G
Sbjct: 172 RGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGD 231
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAM 401
AE +F M P+ TY + M G+C D+V+ A ++ EL G +
Sbjct: 232 AERLFDAMKEAGMRPNQYTYN--VLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTL 289
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
++ +C +EA +F + GV P Y L ++ + L + M + G+
Sbjct: 290 IDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGL 349
Query: 462 VPNK 465
P++
Sbjct: 350 CPDE 353
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 104/233 (44%), Gaps = 17/233 (7%)
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
A + G++ E V R+ + P + N ++D K + ++F ++ P
Sbjct: 120 ALSQMGLLDEALYVFRRLWT---LPALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVP 176
Query: 324 TLPTFNSMIINYGKARLQG---KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
++ T+N++I R QG KA+ ++ +M A + P+ ITY +I + + A
Sbjct: 177 SVVTYNTLI---NACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAE 233
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+FD + + G T N ++ +C A +L++ N G+ P++ + L +
Sbjct: 234 RLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGF 293
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGS-QSGSAKTDLT 492
KA + + + M + G+ P + ++S + G+ +SG A+ L+
Sbjct: 294 CKAKRFSEAKDMFRDMPRFGVAPT-------VPVYNSLMDGAFRSGDAQEALS 339
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 144/335 (42%), Gaps = 31/335 (9%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADT-GIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
L + K+ ++ + ++FR M R+ +A T +Y+ L+ + G + A+ L+ EM
Sbjct: 289 LIDGFCKAKRFSEAKDMFRDMP--RFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTR 346
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G PD +++ L + + A+ L ++ + N YN L+ +
Sbjct: 347 LGLCPD-EFTCSIVVRGLCDGGQIQVAARFLEGVRE----DGVNLNAAAYNALIDEYCRN 401
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
N+++ A + E + P++ +Y+ ++D + K G ++ ++ + M + +P+++T+
Sbjct: 402 GNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTY 461
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA-RLQGKAEYVFQKMT 352
LI + K D + K ++ + P T + ++ + R+Q +V + +
Sbjct: 462 TALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVMEH-S 520
Query: 353 AMKYT-----------------PSFITYECIITMYG-YCDNVS-RAREIFDELSKLGKDM 393
+KY+ P+ Y +I YG Y D A ++F + K G
Sbjct: 521 GIKYSDIHSFFSNFTTEEEPLIPNSAIYMTLI--YGLYLDGQHYEAGKLFSYMRKSGMIS 578
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
T ++ CM G A +L+ + +GV P
Sbjct: 579 DSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKP 613
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 165/397 (41%), Gaps = 59/397 (14%)
Query: 99 TLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKK 158
LNK V VV C F + K+ K V M ++ DT YS++I +
Sbjct: 451 VLNK-VNVVSFARCLCGFGKFEKAYK------VIHEMMGN-GFVPDTSTYSEVIGFLCNA 502
Query: 159 GQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKP 218
+ A +LF EM+ +G PD Y LI KA + +A + +M + C+P
Sbjct: 503 SRVENAFFLFKEMKGTGVVPDVYTYTILIDCF----SKAGIIKQAHNWLDEMV-RDGCEP 557
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
+VTY L+ A +A+ V N LF+ + P++ TY ++D Y K+G I++ +
Sbjct: 558 TVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIY 617
Query: 279 SRMKSNQC----------------KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+RM+ + KP+++T+ L+D K + +++ +
Sbjct: 618 ARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCE 677
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P ++++I + KA +A+ VF KM Y P+ TY +I D + + + +
Sbjct: 678 PNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLI------DRLFKDKRL 731
Query: 383 FDELSKLGKDMKVSTLNAMLEAYC----------MNGLP-----TEADLLFENSHNMGVT 427
D+ + L+ MLE C ++GL EA L G
Sbjct: 732 ---------DLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCK 782
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
P+ TY + + KA + +L + M G PN
Sbjct: 783 PNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPN 819
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 162/402 (40%), Gaps = 53/402 (13%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+C + M + Y + T I++ L+ K A L +M C+P VYN L
Sbjct: 361 RCKRILSMMIAEGCYPSYT-IFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNIL 419
Query: 187 I---------------------------TAHLHTRDKAKALAKALGYFQKMKGMERC--- 216
I + + + A+ L F K + +
Sbjct: 420 IGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHE 479
Query: 217 ------KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
P+ TY+ ++ A V+ LFKE+ + + PD+YTY ++D + K G+
Sbjct: 480 MMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGI 539
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
IK+ + L M + C+P ++T+ LI +Y K + ++F+ ++ P + T+ +
Sbjct: 540 IKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTA 599
Query: 331 MIINYGK-----------ARLQGKAEY-----VFQKMTAMKYTPSFITYECIITMYGYCD 374
+I Y K AR++G A+ F+ + P+ +TY ++
Sbjct: 600 LIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAH 659
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
V AR++ + + G + +A+++ +C EA +F G P+ TY
Sbjct: 660 KVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYS 719
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
L K +LV K+L +M +N PN + E ++ S
Sbjct: 720 SLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLS 761
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 145/330 (43%), Gaps = 33/330 (10%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD--------------PSV--YNALITAHL 191
Y+ LI K G A +++ MR PD P+V Y AL+
Sbjct: 597 YTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLC 656
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KA + A + M ++ C+PN + Y+ L+ +A +D+ +F ++ E
Sbjct: 657 ----KAHKVKDARDLLETM-FVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGY 711
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
P++YTY+ ++D K+ + + VLS+M N C P+I+ + +ID K D+ +
Sbjct: 712 NPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYK 771
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+ + KP + T+ +MI +GKA K +F++M + P+F+TY +I
Sbjct: 772 LMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLI---- 827
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC--MNGLPTEADL---LFENSHNMGV 426
N A DE L ++MK + + +YC + G E L L E G
Sbjct: 828 ---NHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGS 884
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
P YK+L + KA E+ +L K +
Sbjct: 885 APTILLYKVLIDNFVKAGRLEVALELHKEV 914
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 175/428 (40%), Gaps = 38/428 (8%)
Query: 60 CC---VWTRPRSKRGR------KSEELESKELVRVLMRSFS-DKEPLVRTLNKYVKVVRS 109
CC +W + GR K + LV+V +R+ D LV + +
Sbjct: 216 CCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMD 275
Query: 110 EHCFLLFEE-LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLF 168
E F + L K KW + L + ++ ++ +T +Y+K+I+ + + AM
Sbjct: 276 EFTLGFFAQALCKVGKWREALSLI----EKEDFVPNTILYNKMISGLCEASFFEEAMDFL 331
Query: 169 SEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGM---ERCKPNIVTYNI 225
+ MR++ C P+ Y L+ L+ K LG +++ M E C P+ +N
Sbjct: 332 NRMRSTSCIPNVQTYRILLCGCLNK--------KQLGRCKRILSMMIAEGCYPSYTIFNS 383
Query: 226 LLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMI------KEMESVLS 279
L+ A ++ + L K++ + P YN ++ + G + + E +
Sbjct: 384 LVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYN 443
Query: 280 RMKSNQC---KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
M S K ++++F + +GK F+K +V +M + P T++ +I
Sbjct: 444 EMLSAGTVLNKVNVVSFARCLCGFGK---FEKAYKVIHEMMGNGFVPDTSTYSEVIGFLC 500
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
A A ++F++M P TY +I + + +A DE+ + G + V
Sbjct: 501 NASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVV 560
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
T ++ AY + A+ LFE G P+ TY L Y K+ E ++ RM
Sbjct: 561 TYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARM 620
Query: 457 EQNGIVPN 464
+ +P+
Sbjct: 621 RGDADIPD 628
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 154/365 (42%), Gaps = 39/365 (10%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
I + Y L+ K Q + S M GC P +++N+L+ A+ + D + A
Sbjct: 340 IPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYA-- 397
Query: 202 KALGYFQKMKGMERC--KPNIVTYNILLRA-CAQARNVDQVN-ALFKELHESILAP---- 253
++ +K ME+C KP V YNIL+ + C+ V L ++ + +L+
Sbjct: 398 -----YKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVL 452
Query: 254 ---DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
++ ++ + +GK ++ V+ M N PD T++ +I +
Sbjct: 453 NKVNVVSFARCLCGFGK---FEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAF 509
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+FK + + P + T+ +I + KA + +A +M P+ +TY +I Y
Sbjct: 510 FLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAY 569
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG-----------------LPTE 413
VS A E+F+ + G V T A+++ YC +G +P +
Sbjct: 570 LKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIP-D 628
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
D+ F+ +N+ P+ TY L KA+ + + LL+ M +G PN + ++
Sbjct: 629 VDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALID 688
Query: 474 TFSSS 478
F +
Sbjct: 689 GFCKA 693
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 135/295 (45%), Gaps = 20/295 (6%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + K+ K + EVF M +R Y + YS LI + K + L + + S+M +
Sbjct: 686 LIDGFCKAAKLDEAQEVFHKMV-ERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLEN 744
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER--CKPNIVTYNILLRACAQ 232
C P+ +Y +I D +AK ++ M ME CKPN+VTY ++ +
Sbjct: 745 SCAPNIVIYTEMI-------DGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGK 797
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
A VD+ LF+E+ AP+ TY +++ G + E ++L MK + +
Sbjct: 798 AGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSS 857
Query: 293 FNLLIDSYGKRQ---AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA-RLQGKAEYVF 348
+ +I+ Y KR+ + +E+V K + PT+ + +I N+ KA RL+ E
Sbjct: 858 YCKVIEGY-KREFILSLGLLEEVEK----NGSAPTILLYKVLIDNFVKAGRLEVALELHK 912
Query: 349 QKMTA-MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
+ ++A M T Y +I + Y + A E+F ++ + G + T +L
Sbjct: 913 EVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLL 967
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/408 (19%), Positives = 159/408 (38%), Gaps = 49/408 (12%)
Query: 128 CLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
C++ F W +Q Y +Y L+ V + R+ E+R D V L+
Sbjct: 154 CVKFFLWAGRQIGYDHTPAVYIALLDVFERGSYDRVPEEFLREIRGD----DKEVLGKLL 209
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
+ + AL ++K KP +TYN L++ +A +D + +E+
Sbjct: 210 NVLIRKCCRNGLWNVALEELGRLKDFGY-KPTRMTYNALVQVFLRADKLDTAQLVHREMS 268
Query: 248 ESILAPDIYT--------------------------------YNGVMDAYGKNGMIKEME 275
E L+ D +T YN ++ + +E
Sbjct: 269 ELGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAM 328
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
L+RM+S C P++ T+ +L+ ++ + +++ ++ P+ FNS++ Y
Sbjct: 329 DFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAY 388
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK------L 389
K+ A + +KM + P ++ Y +I C + EL++ L
Sbjct: 389 CKSDDFSYAYKLLKKMEKCECKPGYVVYNILIG--SICSGGELPGPVTFELAEKAYNEML 446
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM---GVTPDSSTYKLLYKAYTKANMK 446
++ +N + A C+ G + + ++ H M G PD+STY + A+
Sbjct: 447 SAGTVLNKVNVVSFARCLCGF-GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRV 505
Query: 447 ELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTRS 494
E L K M+ G+VP+ + ++ FS + Q+ + ++ R
Sbjct: 506 ENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRD 553
>gi|359482557|ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39710
[Vitis vinifera]
Length = 990
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 162/361 (44%), Gaps = 31/361 (8%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
++GK+D + L +F+ M ++ Y + Y+ +I + ++LFS+M + CR
Sbjct: 124 KIGKAD---ESLTLFQEM-TEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCR 179
Query: 178 PDPSVYNALIT-----AHLHTRDKA-------------KALAKALGYFQKMKGMERCKPN 219
P+ ++ ++ L D+ L + L R N
Sbjct: 180 PNGFTFSVILNVLVAEGQLGRLDEVVEVSNKFMNKSIYAYLVRTLSKLGHASEAHRLFCN 239
Query: 220 IVT---------YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
+ + Y +L + A + L ++HE ++ D YN V+ A GK
Sbjct: 240 MWSFHDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKK 299
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
++ + +MK + PDI ++N+LI S+G+ ++ ++F+ L +S KP + +FNS
Sbjct: 300 TSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNS 359
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
+I GK +A F++M +P +TY +I +G D V A +FDE+ G
Sbjct: 360 LINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEG 419
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
+ T N +L+ +G EA L+ G+TPDS TY +L + + ++ K V+
Sbjct: 420 CSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGSHQKVRVR 479
Query: 451 K 451
+
Sbjct: 480 R 480
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 166/398 (41%), Gaps = 42/398 (10%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K +K Q VF+ M+++ D Y+ +I + GK G+ ++ LF EM
Sbjct: 82 MLLDALAKDNKVDQVYMVFKDMKRKHCE-PDEYTYTIMIRMTGKIGKADESLTLFQEMTE 140
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G P+ YN +I A + R + K + F KM C+PN T++++L
Sbjct: 141 KGYTPNLIAYNTMIQALANNR----MVDKTIFLFSKMV-ENNCRPNGFTFSVILNVLVAE 195
Query: 234 RNVDQVNALFKELHESILAPDIYTY--------------------------NGVMDAY-- 265
+ +++ + E+ + IY Y G DAY
Sbjct: 196 GQLGRLDEVV-EVSNKFMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYMS 254
Query: 266 -----GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
G E +LS++ + D + +N ++ + GK + + +++ +
Sbjct: 255 MLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDG 314
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P + ++N +I ++G+A +A +F+++ P I++ +I G ++ A
Sbjct: 315 PSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAH 374
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
F E+ + G V T + ++E + A LF+ G +P+ TY +L
Sbjct: 375 MRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCL 434
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFF--LEALETFS 476
++ L +++Q G+ P+ + LE L++ S
Sbjct: 435 ERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGS 472
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 123/302 (40%), Gaps = 41/302 (13%)
Query: 204 LGYFQKMKGMERC---------KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
+G F +ERC + N TY LL+A ++ N ++ ++ EL D
Sbjct: 17 IGIFGGGADVERCFDLVKKWDLQMNCYTYKCLLQAHLRSNNSNKAFEVYVELRRRGYKLD 76
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
I+ YN ++DA K+ + ++ V MK C+PD T+ ++I GK D+ +F+
Sbjct: 77 IFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQ 136
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
+ P L +N+MI R+ K ++F KM P+ T+ I+ +
Sbjct: 137 EMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVILNVLVAEG 196
Query: 375 NVSRAREIFD----------------ELSKLGKDMKVSTL----------------NAML 402
+ R E+ + LSKLG + L +ML
Sbjct: 197 QLGRLDEVVEVSNKFMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGDRDAYMSML 256
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
E+ C G TEA L H ++ D+ Y + A K + L ++M+Q+G
Sbjct: 257 ESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPS 316
Query: 463 PN 464
P+
Sbjct: 317 PD 318
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/347 (20%), Positives = 143/347 (41%), Gaps = 37/347 (10%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A ++ E+R G + D YN L+ A K + + F+ MK + C+P+ TY
Sbjct: 61 AFEVYVELRRRGYKLDIFAYNMLLDA----LAKDNKVDQVYMVFKDMK-RKHCEPDEYTY 115
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
I++R + D+ LF+E+ E P++ YN ++ A N M+ + + S+M
Sbjct: 116 TIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVE 175
Query: 284 NQCKPDIITFNLLID---SYGKRQAFDKMEQVFKSLM----------------HSKEKPT 324
N C+P+ TF+++++ + G+ D++ +V M H+ E
Sbjct: 176 NNCRPNGFTFSVILNVLVAEGQLGRLDEVVEVSNKFMNKSIYAYLVRTLSKLGHASEAHR 235
Query: 325 L-------------PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
L + SM+ + A +A + K+ + + + Y +++ G
Sbjct: 236 LFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALG 295
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
S ++++++ + G + + N ++ ++ G EA +FE N PD
Sbjct: 296 KLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDII 355
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
++ L K + K M + G+ P+ + +E F +
Sbjct: 356 SFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKT 402
>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
Length = 822
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 154/365 (42%), Gaps = 46/365 (12%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH---TR 194
++ ++ D + S LI + ++G A+ F + G + ++NALI TR
Sbjct: 443 RKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTR 502
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF----------- 243
D K + GM + P++VTY +L++ A+ +D+ ALF
Sbjct: 503 DGLKMYI--------LMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPD 554
Query: 244 ------------------------KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
K + + + PDI YN +++ + + G ++ + +L
Sbjct: 555 HIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLR 614
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
+ +PDI+T+N +I Y + F K ++F+ L + +P TF +I Y K
Sbjct: 615 EIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDG 674
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLN 399
A +F M P+ +TY C+I Y +N A E+++++ + + +
Sbjct: 675 RMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYS 734
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
+++ C GL EA L F+ + + PD Y +L + Y K L M N
Sbjct: 735 ILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVN 794
Query: 460 GIVPN 464
GI+P+
Sbjct: 795 GIMPD 799
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 177/424 (41%), Gaps = 31/424 (7%)
Query: 26 SSSSSSFNQSSSQNYNFTHRHIPLSLRTRPRTGICCVWTRPRSKRGRKSEELESKELVRV 85
SS F +S + F I L P +C + S++G E L
Sbjct: 419 SSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEAL-------- 470
Query: 86 LMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADT 145
R F TLN Y+ + CF L ++ L+ + + M K I D
Sbjct: 471 --RFFFQAVKRGLTLNNYLFNALIDGCF----RLKRTRDGLK-MYILMGMYK---VIPDV 520
Query: 146 GIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALG 205
Y+ L+ + ++G+ A+ LF ++ G PD +Y LI RD A L
Sbjct: 521 VTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQ---- 576
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
F+ M+ P+I YN+L+ + V+ V L +E+ + L PDI TYN ++ Y
Sbjct: 577 IFKLMQS-NGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGY 635
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ + + +K + +P+ ITF +LID+Y K D +F S++ +P +
Sbjct: 636 CSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNI 695
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T++ +I Y K A +++KM + +P+ ++Y +I G C
Sbjct: 696 LTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILID--GLCKKGLMEEASLAF 753
Query: 386 LSKLGKDM--KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+G+ + V ++ YC G EA +L+++ G+ PD LL KA +
Sbjct: 754 QCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDD----LLQKALAEY 809
Query: 444 NMKE 447
++
Sbjct: 810 GFQD 813
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 147/331 (44%), Gaps = 13/331 (3%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
++ + D IYS LI + + G+ LFS G + D ++++++ A++ D
Sbjct: 303 EKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLG 362
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
KA+ Y + +K E PN+VTY+IL+ + V + +F ++ + L P + T
Sbjct: 363 KAIEV---YTRMLK--EGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLT 417
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y+ ++D + K+ +++ + M PD++ ++LI+ ++ D+ + F +
Sbjct: 418 YSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAV 477
Query: 318 HSKEKPTLPTFNSMIINYGKARLQ----GKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
FN++I G RL+ G Y+ M K P +TY ++
Sbjct: 478 KRGLTLNNYLFNALI--DGCFRLKRTRDGLKMYILMGMY--KVIPDVVTYTVLVKGLAEQ 533
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ A +F +L K G +++ +C P +F+ + G+ PD Y
Sbjct: 534 GRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIY 593
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+L + + E V +LL+ + + G+ P+
Sbjct: 594 NVLINMFFREGCVENVLELLREIIKYGLEPD 624
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 111/253 (43%), Gaps = 4/253 (1%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P IV N +L+ + + F + S +P++ T++ +++ Y K + E S+
Sbjct: 238 PKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSL 297
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
+ M PD++ +++LI+ + ++ +F + K + F+S++ Y +
Sbjct: 298 YNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVR 357
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKV 395
GKA V+ +M +P+ +TY +I G C N V A +F ++ K G + V
Sbjct: 358 VGDLGKAIEVYTRMLKEGISPNVVTYSILIN--GLCRNGRVLEACGVFGQILKQGLEPSV 415
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
T +++++ +C + + L+ G PD +L ++ M + + +
Sbjct: 416 LTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQ 475
Query: 456 MEQNGIVPNKRFF 468
+ G+ N F
Sbjct: 476 AVKRGLTLNNYLF 488
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 96/251 (38%), Gaps = 1/251 (0%)
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
E CK + Y + + + V++ + L E L P I N ++ I
Sbjct: 200 EMCK-GLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGV 258
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
M + P+++TF+ LI+ Y K D+ ++ ++ P L ++ +I
Sbjct: 259 ASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILIN 318
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
+A + +F A + + I+ Y ++ +A E++ + K G
Sbjct: 319 GLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISP 378
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
V T + ++ C NG EA +F G+ P TY L + K+ L
Sbjct: 379 NVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLY 438
Query: 454 KRMEQNGIVPN 464
M + G VP+
Sbjct: 439 GIMLRKGHVPD 449
>gi|302766812|ref|XP_002966826.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
gi|300164817|gb|EFJ31425.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
Length = 484
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 157/366 (42%), Gaps = 10/366 (2%)
Query: 109 SEHCF-LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWL 167
S C+ + E+ K + ++ + M+++ D+ ++ +I +GQ AM +
Sbjct: 50 SVECYTVAIAEVVAEKKMSEAQQLLKQMEEEDGLAPDSVCFNTVINGWCNEGQMEEAMRV 109
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK-------GMER-CKPN 219
EMR CRP S YN LI + +A L K + G+E +PN
Sbjct: 110 VQEMRQKNCRPTTSTYNTLIKGYGVAGQAEQAQQLVLHLLNKTRNSPSSEDGLEPVARPN 169
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+ T N LL A + +++ + + + + PD TYN + AY G + E+E +++
Sbjct: 170 LRTMNTLLNAWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKAYAAAGRVAELEDLIA 229
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
MK+ + KP++ T+ +LI Y + ++ Q+ L P + FN+++ Y +
Sbjct: 230 DMKNARLKPNLRTYAILISCYCQNGMPERGLQLLSRLKFEGLHPDVVAFNTLLKGYSQEN 289
Query: 340 LQG-KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
Q K E V M A P TY I+ + +A+ I E+ + V
Sbjct: 290 DQQLKLEMVLDLMAANGVRPDVTTYSTIMNWWSSAGMADKAQTILLEMQQDRVKPDVRAF 349
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
+ + Y +G EA+ L ++ GV P+ Y + + + ++L+ M +
Sbjct: 350 AILAKGYVRSGRTHEAESLLQDMSLHGVAPNVVVYTTIISGWCSMGRMDDALRVLELMLE 409
Query: 459 NGIVPN 464
G PN
Sbjct: 410 RGEAPN 415
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 119/306 (38%), Gaps = 50/306 (16%)
Query: 213 MERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI-LAPDIYTYNGVMDAYGKNGMI 271
M+ +P++ Y + + + + + L K++ E LAPD +N V++ + G +
Sbjct: 44 MQGHRPSVECYTVAIAEVVAEKKMSEAQQLLKQMEEEDGLAPDSVCFNTVINGWCNEGQM 103
Query: 272 KEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE---------- 321
+E V+ M+ C+P T+N LI YG ++ +Q+ L++
Sbjct: 104 EEAMRVVQEMRQKNCRPTTSTYNTLIKGYGVAGQAEQAQQLVLHLLNKTRNSPSSEDGLE 163
Query: 322 ---KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
+P L T N+++ + + +A V + + P +TY + Y V+
Sbjct: 164 PVARPNLRTMNTLLNAWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKAYAAAGRVAE 223
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA-----DLLFENSH----------- 422
++ ++ + T ++ YC NG+P L FE H
Sbjct: 224 LEDLIADMKNARLKPNLRTYAILISCYCQNGMPERGLQLLSRLKFEGLHPDVVAFNTLLK 283
Query: 423 --------------------NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
GV PD +TY + ++ A M + Q +L M+Q+ +
Sbjct: 284 GYSQENDQQLKLEMVLDLMAANGVRPDVTTYSTIMNWWSSAGMADKAQTILLEMQQDRVK 343
Query: 463 PNKRFF 468
P+ R F
Sbjct: 344 PDVRAF 349
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 130/286 (45%), Gaps = 6/286 (2%)
Query: 157 KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERC 216
++G+ A + + ++++G +PD YN L A+ A +A+ MK R
Sbjct: 182 REGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKAYA----AAGRVAELEDLIADMKN-ARL 236
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK-NGMIKEME 275
KPN+ TY IL+ Q ++ L L L PD+ +N ++ Y + N ++E
Sbjct: 237 KPNLRTYAILISCYCQNGMPERGLQLLSRLKFEGLHPDVVAFNTLLKGYSQENDQQLKLE 296
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
VL M +N +PD+ T++ +++ + DK + + + + KP + F + Y
Sbjct: 297 MVLDLMAANGVRPDVTTYSTIMNWWSSAGMADKAQTILLEMQQDRVKPDVRAFAILAKGY 356
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
++ +AE + Q M+ P+ + Y II+ + + A + + + + G+ +
Sbjct: 357 VRSGRTHEAESLLQDMSLHGVAPNVVVYTTIISGWCSMGRMDDALRVLELMLERGEAPNL 416
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+T+ ++ +C P EA+ + G+ DS ++ A++
Sbjct: 417 NTVQTLVWGFCEARQPREAEEMVAAMAAAGLPVDSKCLDMIASAWS 462
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/288 (18%), Positives = 120/288 (41%), Gaps = 10/288 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ L G+ L ++M+N+ +P+ Y LI+ + +
Sbjct: 204 DAVTYNTLAKAYAAAGRVAELEDLIADMKNARLKPNLRTYAILISCYCQN----GMPERG 259
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVD-QVNALFKELHESILAPDIYTYNGVM 262
L ++K E P++V +N LL+ +Q + ++ + + + + PD+ TY+ +M
Sbjct: 260 LQLLSRLK-FEGLHPDVVAFNTLLKGYSQENDQQLKLEMVLDLMAANGVRPDVTTYSTIM 318
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+ + GM + +++L M+ ++ KPD+ F +L Y + + E + + +
Sbjct: 319 NWWSSAGMADKAQTILLEMQQDRVKPDVRAFAILAKGYVRSGRTHEAESLLQDMSLHGVA 378
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P + + ++I + A V + M P+ T + ++ +G+C+
Sbjct: 379 PNVVVYTTIISGWCSMGRMDDALRVLELMLERGEAPNLNTVQTLV--WGFCEARQPREAE 436
Query: 383 FDELSKLGKDMKVST--LNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
+ + V + L+ + A+ G P E D + + ++P
Sbjct: 437 EMVAAMAAAGLPVDSKCLDMIASAWSALGFPFETDRILASDRRRQLSP 484
>gi|302755642|ref|XP_002961245.1| hypothetical protein SELMODRAFT_70140 [Selaginella moellendorffii]
gi|300172184|gb|EFJ38784.1| hypothetical protein SELMODRAFT_70140 [Selaginella moellendorffii]
Length = 489
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 155/357 (43%), Gaps = 14/357 (3%)
Query: 117 EELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGC 176
E L + W LE F W + ++ D YS +I V+G G LF EMR G
Sbjct: 5 EVLKRVRDWRVALEFFTWAKSVPFFKHDAMNYSMMIRVLGTCGNYTQGRKLFDEMREKGL 64
Query: 177 RPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK--GMERCKPNIVTYNILLRACAQAR 234
+PD N +I + A + A+ F++ G E P++ TY +L+ +A
Sbjct: 65 KPDLVTVNNMIKCY----GSANRMDDAMDLFREFPDFGFE---PDVCTYALLIDLLGKAG 117
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
V +V LF EL L PD Y +N ++ + K + + L MK +P +T+
Sbjct: 118 RVSEVRKLFLELQSRKLKPDEYVFNSMIANFSKWKDLGLADEALDYMKVCGIRPSTVTYA 177
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++++ Y K F E+++ ++S P L +N+ I+ +G A +AE+ + +
Sbjct: 178 IVLNMYAKSLNFMLAEKIYCEYLNSNLPPDLYVYNNAILFFGLAGRCREAEWAVEDIEKA 237
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE- 413
P +Y II+ + A++ FD+ G NA+++AY + L E
Sbjct: 238 GLVPDKFSYCTIISAWARQGCAPDAKKWFDKARSRGITPSPEMCNALIDAY-IKALDLEP 296
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
+ + GV TY L+ Y + KE V L M + G +K FLE
Sbjct: 297 VAGILDAMPGWGVKATLQTYTYLFNYYCEC-CKEYVDLLRDYMRKTGHPADK--FLE 350
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 166/386 (43%), Gaps = 41/386 (10%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L +L +S++ + + R M+K+ + + Y+ LI +G+ +A L +EM +
Sbjct: 308 MLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV-TYNTLINGFSNEGKVLIASQLLNEMLS 366
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G P+ +NALI H+ + +AL + Y + KG+ P+ V+Y +LL +
Sbjct: 367 FGLSPNHVTFNALIDGHISEGNFKEALK--MFYMMEAKGL---TPSEVSYGVLLDGLCKN 421
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
D + + + + TY G++D KNG + E +L+ M + PDI+T+
Sbjct: 422 AEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTY 481
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKP------TLP--------------------- 326
+ LI+ + K F +++ + P TL
Sbjct: 482 SALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMIL 541
Query: 327 --------TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
TFN ++ + KA +AE + MT+ P+ ++++C+I YG +
Sbjct: 542 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK 601
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A +FDE++K+G T ++L+ C G EA+ ++ H + D+ Y L
Sbjct: 602 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 661
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPN 464
A K+ L M Q I+P+
Sbjct: 662 AMCKSGNLAKAVSLFGEMVQRSILPD 687
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 164/399 (41%), Gaps = 18/399 (4%)
Query: 95 PLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAV 154
P V T N + V+ +E F KS +Q +E + Y Y+ ++
Sbjct: 231 PDVATFNILINVLCAEGSF------EKSSYLMQKME-------KSGYAPTIVTYNTVLHW 277
Query: 155 MGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME 214
KKG+ + A+ L M++ G D YN LI H ++ +AK + M+
Sbjct: 278 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLI----HDLCRSNRIAKGYLLLRDMR-KR 332
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
PN VTYN L+ + V + L E+ L+P+ T+N ++D + G KE
Sbjct: 333 MIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEA 392
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
+ M++ P +++ +L+D K FD + + + T+ MI
Sbjct: 393 LKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDG 452
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
K +A + +M+ P +TY +I + A+EI + ++G
Sbjct: 453 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPN 512
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
+ ++ C G EA ++E G T D T+ +L + KA ++ ++
Sbjct: 513 GIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 572
Query: 455 RMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTR 493
M +GI+PN F + + +S G ++ S ++T+
Sbjct: 573 CMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 611
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 131/290 (45%), Gaps = 5/290 (1%)
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
C +PSVY+ LI +L + + +L F+ M G+ P++ T N +L + ++
Sbjct: 159 CNSNPSVYDILIRVYL----REGMIQDSLEIFRLM-GLYGFNPSVYTCNAILGSVVKSGE 213
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
V + KE+ + + PD+ T+N +++ G ++ ++ +M+ + P I+T+N
Sbjct: 214 DVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNT 273
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
++ Y K+ F ++ + + T+N +I + ++ K + + M
Sbjct: 274 VLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRM 333
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
P+ +TY +I + V A ++ +E+ G T NA+++ + G EA
Sbjct: 334 IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEAL 393
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+F G+TP +Y +L K +L + RM++NG+ +
Sbjct: 394 KMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 443
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 134/299 (44%), Gaps = 20/299 (6%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
DT +Y+ L+ M K G A+ LF EM PD Y +LI+ K K +
Sbjct: 651 VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR---KGKTVIA 707
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI-LAPDIYTYNGV 261
L + ++ + PN V Y + +A + F+E +++ PDI T N +
Sbjct: 708 IL-FAKEAEARGNVLPNKVMYTCFVDGMFKAGQW-KAGIYFREQMDNLGHTPDIVTTNAM 765
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+D Y + G I++ +L M + P++ T+N+L+ Y KR+ +++S++ +
Sbjct: 766 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 825
Query: 322 KPTLPTFNSMII-----NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN- 375
P T +S+++ N + L+ ++ + + +YT + + +C C N
Sbjct: 826 LPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKC-------CANG 878
Query: 376 -VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
++ A ++ ++ LG + T +AM+ N E+ ++ G++P+S Y
Sbjct: 879 EINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 937
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 153/394 (38%), Gaps = 46/394 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L L K+ K + E R M + +T + LI G G+ A +F EM
Sbjct: 553 VLVTSLCKAGKVAEAEEFMRCMTSD-GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 611
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G P Y +L+ K L +A + + + + + V YN LL A ++
Sbjct: 612 VGHHPTFFTYGSLLKGLC----KGGHLREAEKFLKSLHAVP-AAVDTVMYNTLLTAMCKS 666
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG-------MIKEMES---------- 276
N+ + +LF E+ + + PD YTY ++ + G KE E+
Sbjct: 667 GNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVM 726
Query: 277 ----VLSRMKSNQCK---------------PDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
V K+ Q K PDI+T N +ID Y + +K + +
Sbjct: 727 YTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMG 786
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN-- 375
+ P L T+N ++ Y K + + +++ + P +T C + G C++
Sbjct: 787 NQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT--CHSLVLGICESNM 844
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+ +I G ++ T N ++ C NG A L + ++G++ D T
Sbjct: 845 LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 904
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFL 469
+ + + + + +L M + GI P R ++
Sbjct: 905 MVSVLNRNHRFQESRMVLHEMSKQGISPESRKYI 938
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 131/332 (39%), Gaps = 18/332 (5%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++ L+ + K G+ A M + G P+ ++ LI + ++ + KA +
Sbjct: 547 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS-- 604
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F +M + P TY LL+ + ++ + K LH A D YN ++
Sbjct: 605 --VFDEMTKVGH-HPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 661
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK- 322
A K+G + + S+ M PD T+ LI ++ + +++ +KE
Sbjct: 662 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG------KTVIAILFAKEAE 715
Query: 323 ------PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
P + + KA Y ++M + +TP +T +I Y +
Sbjct: 716 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 775
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+ ++ E+ ++T N +L Y + + LL+ + G+ PD T L
Sbjct: 776 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 835
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
++NM E+ K+LK G+ ++ F
Sbjct: 836 VLGICESNMLEIGLKILKAFICRGVEVDRYTF 867
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 109/320 (34%), Gaps = 83/320 (25%)
Query: 171 MRNSGCRPDPSVYNALITAHLHTR----DKAKALAKALG---------YFQKMKGMERCK 217
++ G D V IT H+ R D A+ + K L + M C
Sbjct: 101 VKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCN 160
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
N Y+IL+R + + +F+ + P +YT N ++ + K+G + S
Sbjct: 161 SNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 220
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L M + PD+ TFN+LI+ +F+
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFE------------------------------ 250
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
K+ Y+ QKM Y P+ +TY
Sbjct: 251 -----KSSYLMQKMEKSGYAPTIVTY---------------------------------- 271
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
N +L YC G A L ++ + GV D TY +L ++N LL+ M
Sbjct: 272 -NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR 330
Query: 458 QNGIVPNKRFFLEALETFSS 477
+ I PN+ + + FS+
Sbjct: 331 KRMIHPNEVTYNTLINGFSN 350
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 141/354 (39%), Gaps = 42/354 (11%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ + M K GQ + ++ +M N G PD NA+I + + + K
Sbjct: 726 MYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGY----SRMGKIEKTNDL 781
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+M G + PN+ TYNILL ++ ++V L++ + + + PD T + ++
Sbjct: 782 LPEM-GNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGIC 840
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLID---SYGK-RQAFDKMEQVFKSLMHSKEK 322
++ M++ +L + D TFN+LI + G+ AFD + +V SL S +K
Sbjct: 841 ESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFD-LVKVMTSLGISLDK 899
Query: 323 PTLPTFNSMI---INYGKARL-------QG----------------------KAEYVFQK 350
T S++ + ++R+ QG A V ++
Sbjct: 900 DTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEE 959
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M A K P + ++ C A + + K+ +++ ++ C NG
Sbjct: 960 MIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGN 1019
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA L N G+ D +Y +L L +L + M+ +G + N
Sbjct: 1020 VIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLAN 1073
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 87/218 (39%)
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
T+N+L+ C ++ L K + ++ D T + ++ +N +E VL M
Sbjct: 866 TFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEM 925
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
P+ + LI+ + V + ++ K P ++M+ K
Sbjct: 926 SKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKA 985
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
+A + + M MK P+ ++ ++ + NV A E+ +S G + + + N +
Sbjct: 986 DEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVL 1045
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+ C G A L+E G +++TYK L +
Sbjct: 1046 ITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1083
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 152/331 (45%), Gaps = 11/331 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +IA + K G A+ LF EM P+ YN +I H+ D L +
Sbjct: 191 YNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGD----LESGFRLW 246
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M G+ KPN++TYN+LL +A + + A+ E+ + PD +TY+ + D +
Sbjct: 247 SQMLRHGL---KPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGH 303
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ G + M S+ K T ++L++ K K E+V ++L++S T
Sbjct: 304 SRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTT 363
Query: 326 PTFNSMIINYGK-ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+N++I Y + L+G A +FQ+M + P ITY +I G + ++ A ++
Sbjct: 364 VIYNTLINGYCQIGDLEG-AFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVI 422
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E+ K G + V T N +++AY G + ++ + G+ P+ +Y + A+ K
Sbjct: 423 EMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNG 482
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+L M ++P + + ++ +
Sbjct: 483 KILEAVAILDDMFIKDVLPGAQVYNAIIDAY 513
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 147/322 (45%), Gaps = 11/322 (3%)
Query: 146 GIYSKLIAVMG--KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
G Y+ I + G K G+ A + + NSG +YN LI + D L A
Sbjct: 327 GAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGD----LEGA 382
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
FQ+MK +P+ +TYN L+ + + + + L E+ ++ + P + T+N ++D
Sbjct: 383 FSIFQQMKS-RLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLID 441
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
AYG+ G +++ +LS M+ KP+++++ +++++ K + + + P
Sbjct: 442 AYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLP 501
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRARE 381
+N++I Y + +A + +KM + PS +TY +I G C +S A E
Sbjct: 502 GAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIK--GLCKQSQISEAEE 559
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ D L G V + N ++ A C A L + G+ P TY++L+ +
Sbjct: 560 LLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLG 619
Query: 442 KANMKELVQKLLKRMEQNGIVP 463
A ++ L ++M +VP
Sbjct: 620 GAGRVHEMENLYQQMLDKDVVP 641
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 155/350 (44%), Gaps = 6/350 (1%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM 171
C +L L K K + EV + + + T IY+ LI + G A +F +M
Sbjct: 331 CSILLNGLCKDGKISKAEEVLQTLVNS-GLLQTTVIYNTLINGYCQIGDLEGAFSIFQQM 389
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
++ RPD YNALI K + + +A +M+ P++ T+N L+ A
Sbjct: 390 KSRLIRPDHITYNALING----LGKVERITEAHDLVIEME-KNGVNPSVETFNTLIDAYG 444
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+A +++ + ++ E L P++ +Y +++A+ KNG I E ++L M P
Sbjct: 445 RAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQ 504
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
+N +ID+Y + + D+ + + + S P++ T+N +I K +AE + +
Sbjct: 505 VYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSL 564
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P I+Y +I+ Y N RA E+ E+ K G T + + G
Sbjct: 565 RNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRV 624
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
E + L++ + V P S Y ++ AY K + V+ L K M GI
Sbjct: 625 HEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGI 674
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 147/344 (42%), Gaps = 9/344 (2%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
R + D YS L + G ++ + LF E G + + L+ K
Sbjct: 287 RKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLC----KDG 342
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
++KA Q + + ++ YN L+ Q +++ ++F+++ ++ PD TY
Sbjct: 343 KISKAEEVLQTLVNSGLLQTTVI-YNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITY 401
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N +++ GK I E ++ M+ N P + TFN LID+YG+ +K + +
Sbjct: 402 NALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQE 461
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
KP + ++ S++ + K +A + M P Y II Y C + +
Sbjct: 462 KGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQ 521
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A + +++ G + T N +++ C +EA+ L ++ N G+ PD +Y L
Sbjct: 522 AFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLIS 581
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGS 482
A + + +L K M + GI P+ R + SSL G+
Sbjct: 582 ACCYRSNTDRALELEKEMWKCGIKPSPRTY----RMLFSSLGGA 621
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 134/323 (41%), Gaps = 11/323 (3%)
Query: 156 GKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER 215
G+ R A L R RPD +N + A + D L +A+G ++M
Sbjct: 131 GRHADVRGAFELLVAAR---ARPDTFTWNKAVQACVVAGD----LDEAVGMLRRMGCDGA 183
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
PN +YN+++ +A LF E+ E + P+ TYN ++D + K G ++
Sbjct: 184 PAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGF 243
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
+ S+M + KP++IT+N+L+ + + V + K P T++ + +
Sbjct: 244 RLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGH 303
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDM 393
+ +F++ ++K Y C I + G C + +S+A E+ L G
Sbjct: 304 SRTGDSQTMLSLFEE--SVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQ 361
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
N ++ YC G A +F+ + + PD TY L K L+
Sbjct: 362 TTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLV 421
Query: 454 KRMEQNGIVPNKRFFLEALETFS 476
ME+NG+ P+ F ++ +
Sbjct: 422 IEMEKNGVNPSVETFNTLIDAYG 444
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 158/356 (44%), Gaps = 19/356 (5%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K+ K + E+ M R DT ++ ++ + K G+ A L + M
Sbjct: 15 ILIDGLCKASKTDKASEMLHEMV-DRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAE 73
Query: 174 SGCRPDPSVYNALITAHLHTR--DKAKALAKAL---GYFQKMKGMERCKPNIVTYNILLR 228
CRP YN LI+ + D+AK L G+ P++VTY+IL
Sbjct: 74 RNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFV----------PDVVTYSILAD 123
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
+ +D+ L KE+ + P++ TYN ++D K ++ +L + S+ P
Sbjct: 124 GLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVP 183
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
D++T+ +++D K DK ++ + ++ P++ T+ +++ + +A ++F
Sbjct: 184 DVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIF 243
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
++M + T + Y ++ GYC + SR +E + + + NA+++ YC
Sbjct: 244 KEMVSKDCTADALAYVSLVN--GYCKS-SRTKEAQKVVDGIRGTPYIDVYNALMDGYCKE 300
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G E +FE+ G P+ TY ++ K + L+ M G VP+
Sbjct: 301 GRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPD 356
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 150/345 (43%), Gaps = 10/345 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ + L K + + L++ M K R Y+ L+ + + G+ A +F EM +
Sbjct: 190 IIVDGLCKEGRLDKALKMVEGMLK-RGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVS 248
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
C D Y +L+ + + +A QK+ R P I YN L+ +
Sbjct: 249 KDCTADALAYVSLVNGYCKSSRTKEA--------QKVVDGIRGTPYIDVYNALMDGYCKE 300
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+D++ +F+++ P+I TYN VMD K+G + E L M S C PD++++
Sbjct: 301 GRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSY 360
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N++ID K + QV ++ + P T+N+++ + K A + + M
Sbjct: 361 NIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIK 420
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK-VSTLNAMLEAYCMNGLPT 412
P +TY +I+ + + A E+ E+ + G + +T N +++ C G
Sbjct: 421 AGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLK 480
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
+A LL ++ GV ++ TY + K + LL M+
Sbjct: 481 QALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD 525
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 145/357 (40%), Gaps = 43/357 (12%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKA- 199
++ D YS L + K+G+ A L EM +GC P+ YN LI KA
Sbjct: 111 FVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAY 170
Query: 200 ------------------------------LAKALGYFQKMKGMER-CKPNIVTYNILLR 228
L KAL + M ++R C P+++TY L+
Sbjct: 171 ELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGM--LKRGCTPSVITYTALME 228
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
+ VD+ + +FKE+ D Y +++ Y K+ KE + V+ ++ P
Sbjct: 229 GLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT---P 285
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
I +N L+D Y K D++ VF+ + P + T+N ++ K GK + F
Sbjct: 286 YIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCK---HGKVDEAF 342
Query: 349 ---QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+ M + P ++Y II AR++ D++ + G T N ++ +
Sbjct: 343 PFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQF 402
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
C +A + +N GV PD+ TY L ++ N +L+ M +NG V
Sbjct: 403 CKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCV 459
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 118/273 (43%), Gaps = 39/273 (14%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P++ TYNIL+ +A D+ + + E+ + + PD T+N +MD K G + S+
Sbjct: 8 PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67
Query: 278 LSRMKSNQCK-----------------------------------PDIITFNLLIDSYGK 302
L+ M C+ PD++T+++L D K
Sbjct: 68 LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCK 127
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
R D+ ++ K + + P L T+N++I KA KA + + + + + P +T
Sbjct: 128 RGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVT 187
Query: 363 YECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
Y I+ G C + +A ++ + + K G V T A++E C G EA +F+
Sbjct: 188 YTIIVD--GLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKE 245
Query: 421 SHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
+ T D+ Y L Y K++ + QK++
Sbjct: 246 MVSKDCTADALAYVSLVNGYCKSSRTKEAQKVV 278
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 151/384 (39%), Gaps = 43/384 (11%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L E L ++ + + +F+ M + AD Y L+ K +T+ A + +R +
Sbjct: 226 LMEGLCRTGRVDEAHHIFKEMVSKDC-TADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT 284
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
P VYNAL+ + K L + F+ M C PNI TYNI++ +
Sbjct: 285 ---PYIDVYNALMDGYC----KEGRLDEIPNVFEDM-ACRGCVPNIKTYNIVMDGLCKHG 336
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
VD+ + +H + PD+ +YN ++D K KE VL +M PD +T+N
Sbjct: 337 KVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYN 396
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA-EYVFQKMTA 353
L+ + K + FD + K+++ + P T+N++I + G A E + + +
Sbjct: 397 TLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRN 456
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
+ TY II + +A + D ++ G + T N ++ C G E
Sbjct: 457 GCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDE 516
Query: 414 ADLLFENSHNM---------------------------------GVTPDSSTYKLLYKAY 440
A L + G+ S T+ LL A+
Sbjct: 517 ASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAF 576
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
TK + LL+ M Q G P+
Sbjct: 577 TKTKRLDEALTLLELMVQRGCSPS 600
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 98/221 (44%), Gaps = 4/221 (1%)
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
++E +APD++TYN ++D K + +L M PD +TFN ++D K
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
F++ + + +P+ T+N++I K + +A+ + + + + P +TY
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYS- 119
Query: 366 IITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
I G C + A E+ E+S G + T N +++ C +A L E +
Sbjct: 120 -ILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVS 178
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G PD TY ++ K + K+++ M + G P+
Sbjct: 179 SGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPS 219
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 144/365 (39%), Gaps = 45/365 (12%)
Query: 130 EVFRWMQKQR--WYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
E F +++ + D Y+ +I + K + + A + +M +G PD YN L+
Sbjct: 340 EAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLM 399
Query: 188 TAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
K + A+G + M G++ P+ VTYN L+ +Q + L E
Sbjct: 400 AQFC----KEERFDDAVGILKNMIKAGVD---PDNVTYNTLISGLSQTNRLGDAYELMHE 452
Query: 246 -LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
L + TYN ++D K G +K+ ++ M + + + +T+N+ ID K
Sbjct: 453 MLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEG 512
Query: 305 AFD--------------------------KMEQVFKSLMHSKEKPTLP-------TFNSM 331
D K EQ+ ++ ++E + TFN +
Sbjct: 513 RLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLL 572
Query: 332 IINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGK 391
I + K + +A + + M +PS ITY +IT D V +A E+FDE++ G
Sbjct: 573 IDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGI 632
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
+ ++ C G EA + E + D + LY A E +
Sbjct: 633 VASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAE 692
Query: 452 LLKRM 456
LL+RM
Sbjct: 693 LLRRM 697
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 101/241 (41%), Gaps = 12/241 (4%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L ++++ E+ M + ++ Y+ +I + K+G + A+ L M
Sbjct: 433 LISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGH 492
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G + YN I K L +A +M + + V+Y ++ +A
Sbjct: 493 GVEANTVTYNIFIDRLC----KEGRLDEASSLLSEMDTLR----DEVSYTTVIIGLCKAE 544
Query: 235 NVDQVNALFKELHE-SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+D+ + L +E+ L +T+N ++DA+ K + E ++L M C P +IT+
Sbjct: 545 QLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITY 604
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N++I K DK ++F + + ++ +I YG QG+ + Q +
Sbjct: 605 NMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLI--YGLCG-QGRGKEALQVLEE 661
Query: 354 M 354
M
Sbjct: 662 M 662
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 172/397 (43%), Gaps = 27/397 (6%)
Query: 72 RKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEV 131
R +ES L+ ++R + + ++ T K+++ F + K+ + ++ LE
Sbjct: 97 RSGNYIESLHLLETMVRKGYNPDVILCT-----KLIKG---FFTLRNVPKAVRVMEILEK 148
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
F D Y+ LI K + A + MR+ PD YN +I L
Sbjct: 149 FGQ--------PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMI-GSL 199
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
+R K K L + C+P ++TY IL+ A VD+ L E+ L
Sbjct: 200 CSRGKLDLALKVLDQLLS----DNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGL 255
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
PD++TYN ++ K GM+ ++ ++ C+PD+I++N+L+ + + +++ E+
Sbjct: 256 KPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEK 315
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECIIT 368
+ + K P + T++ +I + GK E + MK TP +Y+ +I
Sbjct: 316 LMTKMFSEKCDPNVVTYSILITTLCR---DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 372
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
+ + A E + + G + N +L C NG +A +F +G +P
Sbjct: 373 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 432
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+SS+Y ++ A + K ++ M NGI P++
Sbjct: 433 NSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDE 469
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 164/376 (43%), Gaps = 13/376 (3%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
GK D L+ L+ Q I Y+ LI +G A+ L EM + G +PD
Sbjct: 203 GKLDLALKVLDQLLSDNCQPTVIT----YTILIEATMLEGGVDEALKLLDEMLSRGLKPD 258
Query: 180 PSVYNALITAHLHTR--DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
YN +I D+A + + L ++KG C+P++++YNILLRA +
Sbjct: 259 MFTYNTIIRGMCKEGMVDRAFEMIRNL----ELKG---CEPDVISYNILLRALLNQGKWE 311
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ L ++ P++ TY+ ++ ++G I+E ++L MK PD +++ LI
Sbjct: 312 EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 371
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
++ + D + ++++ P + +N+++ K +A +F K+ + +
Sbjct: 372 AAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 431
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P+ +Y + + + RA + E+ G D T N+M+ C G+ +A L
Sbjct: 432 PNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFEL 491
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
+ + P TY ++ + KA+ E +L M NG PN+ + +E
Sbjct: 492 LVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGF 551
Query: 478 SLAGSQSGSAKTDLTR 493
+ +++ DL R
Sbjct: 552 AGYRAEAMELANDLVR 567
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 111/243 (45%), Gaps = 7/243 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS LI + + G+ AM L M+ G PD Y+ LI A + L A+ +
Sbjct: 332 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC----REGRLDVAIEFL 387
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ M + C P+IV YN +L + DQ +F +L E +P+ +YN + A
Sbjct: 388 ETMIS-DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 446
Query: 268 NG-MIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+G I+ + +L M SN PD IT+N +I + DK ++ + + P++
Sbjct: 447 SGDKIRALHMIL-EMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVV 505
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T+N +++ + KA A V M P+ TY +I G+ + A E+ ++L
Sbjct: 506 TYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 565
Query: 387 SKL 389
++
Sbjct: 566 VRI 568
>gi|255661194|gb|ACU25766.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 426
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 141/308 (45%), Gaps = 7/308 (2%)
Query: 134 WMQK--QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
W+QK Q D +YS LI + K A+ +FS ++ SG PD YN++I
Sbjct: 31 WLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFAPDLVAYNSMINVFX 90
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
KAK +A +M+ P+ V+Y LL + + + ++F E+ E
Sbjct: 91 ----KAKLFREARSLINEMR-TAGVMPDTVSYTTLLTMHVENKRFLEALSVFAEMREIKC 145
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
D+ T N ++D YG+ GM KE + + M+ +P+++++N L+ YG + F +
Sbjct: 146 LLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPNVVSYNTLLRVYGDAELFGEAIH 205
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+F+ + + + T+NSM++ YGK KA + Q+M P+ ITY II+++
Sbjct: 206 LFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWV 265
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ RA +F +L G ++ M+ AY GL A L P +
Sbjct: 266 KVGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDT 325
Query: 432 TYKLLYKA 439
+L A
Sbjct: 326 AIHILAAA 333
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 153/327 (46%), Gaps = 5/327 (1%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
++R D YS LI GK+G A+ +M D +Y+ LI D
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+KA++ F ++K P++V YN ++ +A+ + +L E+ + + PD
Sbjct: 61 SKAIS----IFSRLK-RSGFAPDLVAYNSMINVFXKAKLFREARSLINEMRTAGVMPDTV 115
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+Y ++ + +N E SV + M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 116 SYTTLLTMHVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 175
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P + ++N+++ YG A L G+A ++F+ M + +TY ++ +YG
Sbjct: 176 RKIGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEH 235
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A + E+ G + T + ++ + G A +LF+ N GV D Y+ +
Sbjct: 236 EKANNLIQEMQNRGIEPNSITYSTIISIWVKVGKLDRAAMLFQKLRNSGVEIDQVLYQTM 295
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVP 463
AY +A + ++LL +++ +P
Sbjct: 296 IVAYERAGLVAHAKRLLHELKRPDNIP 322
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 106/217 (48%)
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
E L+PD YTY+ ++ +GK G+ S L +M+ ++ D++ ++ LI+ K +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
K +F L S P L +NSMI + KA+L +A + +M P ++Y ++
Sbjct: 62 KAISIFSRLKRSGFAPDLVAYNSMINVFXKAKLFREARSLINEMRTAGVMPDTVSYTTLL 121
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
TM+ A +F E+ ++ + ++T N M++ Y G+ EAD LF +G+
Sbjct: 122 TMHVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIE 181
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
P+ +Y L + Y A + L + M++ I N
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 145/360 (40%), Gaps = 42/360 (11%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V K R A L +EMR +G PD Y L+T H+
Sbjct: 71 KRSGFAPDLVAYNSMINVFXKAKLFREARSLINEMRTAGVMPDTVSYTTLLTMHVEN--- 127
Query: 197 AKALAKALGYFQKMK--------------------------------GMERC--KPNIVT 222
K +AL F +M+ GM + +PN+V+
Sbjct: 128 -KRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPNVVS 186
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
YN LLR A + LF+ + + ++ TYN +M YGK ++ +++ M+
Sbjct: 187 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQ 246
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
+ +P+ IT++ +I + K D+ +F+ L +S + + +MI+ Y +A L
Sbjct: 247 NRGIEPNSITYSTIISIWVKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVAYERAGLVA 306
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
A+ + ++ P I + I + + A +F + G+ ++ ++
Sbjct: 307 HAKRLLHELK----RPDNIPRDTAIHILAAAGRLEEATWVFRQAIDAGEVKDITVFERLI 362
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+ + +F+ PDS+ L+ AY K + E + M+ G +
Sbjct: 363 HLFSKYKKYSNVVEVFDKMRERRYFPDSNVIALVLNAYGKLHEFEKANSVYMEMQDEGCI 422
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 146/352 (41%), Gaps = 40/352 (11%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ LI ++ KKG+ R A + S++ PD Y +LI H R+ L A G F
Sbjct: 201 FNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRN----LDLAFGVF 256
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M E C PN VTY+ L+ VD+ + +E+ E + P +YTY + A
Sbjct: 257 DRMVK-EGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCA 315
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+E +++RMK C+P++ T+ LI + + ++ ++ P T
Sbjct: 316 IEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVT 375
Query: 328 FNSMIINY-----------------GKARLQG------------------KAEYVFQKMT 352
+N++I G L KA +F+KM
Sbjct: 376 YNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML 435
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
M P+ +TY +I Y NV+ A + D + + G + T N ++ + G
Sbjct: 436 KMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLE 495
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A F+ G+ P+ +Y L ++K ++ LLKRME+ G PN
Sbjct: 496 SASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPN 547
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 145/328 (44%), Gaps = 13/328 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y++L++ K G+ A + F EM G P+P Y ALI H K + A
Sbjct: 477 DEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGH----SKDGKVDIA 532
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L ++M+ M C PN+ +YN ++ ++ + + ++ E L P++ TY ++D
Sbjct: 533 LSLLKRMEEM-GCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLID 591
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+NG + + M+ +C P++ T++ LI + D+ E+ + +P
Sbjct: 592 GLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAER----MSEIGCEP 647
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRARE 381
TL T+++++ + +AE + + M + P Y ++ +C N V A +
Sbjct: 648 TLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLI--AHCKNLEVDHALK 705
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
IF + G + +S A++ A C G EA LF+N D + +L
Sbjct: 706 IFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLL 765
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFL 469
K +L KLL ME PN + ++
Sbjct: 766 KEGELDLCMKLLHIMESKNFTPNIQTYV 793
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 150/346 (43%), Gaps = 18/346 (5%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+R + Y+ LI+ + + G+ +A+ L+ +M G P+ YNALI
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC----V 385
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+ AL F M+G N TYN +++ ++++ LF+++ + P +
Sbjct: 386 GGRFSTALKIFHWMEG-HGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVV 444
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TYN +++ Y G + +L MK N C+PD T+N L+ + K + F+ +
Sbjct: 445 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM 504
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+ P ++ ++I + K A + ++M M P+ +Y +I +
Sbjct: 505 VECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRF 564
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY-KL 435
S A +I D++ + G V T +++ C NG A +F + P+ TY L
Sbjct: 565 SEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL 624
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
+Y + E +RM + G P L+T+S+ ++G
Sbjct: 625 IYGLCQEGKADE-----AERMSEIGCEP-------TLDTYSTLVSG 658
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 125/297 (42%), Gaps = 39/297 (13%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+P+++T+N L+ ++ V + + ++ + L+PD++TY ++ + +N +
Sbjct: 195 QPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFG 254
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI---- 332
V RM C P+ +T++ LI+ D+ + + ++ +PT+ T+ I
Sbjct: 255 VFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 314
Query: 333 -----------------------------INYGKARLQGKAEY---VFQKMTAMKYTPSF 360
+ G +RL GK E ++ KM P+
Sbjct: 315 AIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRL-GKLEVAIGLYHKMLKEGLVPNT 373
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
+TY +I S A +IF + G T N +++ C+ G +A +LFE
Sbjct: 374 VTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEK 433
Query: 421 SHNMGVTPDSSTYKLLYKAY-TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
MG P TY L Y TK N+ +LL M++NG P++ + E + FS
Sbjct: 434 MLKMGPLPTVVTYNTLINGYLTKGNVNN-AARLLDLMKENGCEPDEWTYNELVSGFS 489
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 106/242 (43%), Gaps = 4/242 (1%)
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
++++AC + +V E+ +Y+ N ++ K M++ ++ +M ++
Sbjct: 133 LMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 192
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
+P ++TFN LI+ K+ + E + + P + T+ S+I+ + + R A
Sbjct: 193 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 252
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAML 402
VF +M P+ +TY +I G C+ V A ++ +E+ + G + V T +
Sbjct: 253 FGVFDRMVKEGCDPNSVTYSTLIN--GLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPI 310
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
A C EA L G P+ TY L ++ E+ L +M + G+V
Sbjct: 311 TALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLV 370
Query: 463 PN 464
PN
Sbjct: 371 PN 372
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 105/250 (42%)
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
N LL A+ V+ L+K++ S + P + T+N +++ K G ++E E +LS++
Sbjct: 167 NTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ 226
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
PD+ T+ LI + + + D VF ++ P T++++I +
Sbjct: 227 YDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDE 286
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A + ++M P+ TY IT ++ A E+ + K G V T A++
Sbjct: 287 ALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALIS 346
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
G A L+ G+ P++ TY L K+ ME +G +
Sbjct: 347 GLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLA 406
Query: 464 NKRFFLEALE 473
N + + E ++
Sbjct: 407 NTQTYNEIIK 416
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N L+ K + + ++K +++S +P+L TFN++I K +AE + ++
Sbjct: 167 NTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ 226
Query: 354 MKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+P TY +I G+C N+ A +FD + K G D T + ++ C G
Sbjct: 227 YDLSPDVFTYTSLI--LGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRV 284
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
EA + E G+ P TY L A +E +L+ RM++ G PN
Sbjct: 285 DEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPN------- 337
Query: 472 LETFSSSLAG 481
++T+++ ++G
Sbjct: 338 VQTYTALISG 347
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 9/151 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS L++ + +KG+ A L +M+ G PD +Y +L+ AH K + AL F
Sbjct: 652 YSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHC----KNLEVDHALKIF 707
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+ KG + ++ Y L+ A +A V++ ALF + E D + ++D
Sbjct: 708 HSIEAKGFQL---HLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGL 764
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
K G + +L M+S P+I T+ +L
Sbjct: 765 LKEGELDLCMKLLHIMESKNFTPNIQTYVIL 795
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 154/341 (45%), Gaps = 23/341 (6%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ +I K GQ A L EM+ G + D +++ LI + + +AL
Sbjct: 1 MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLC----RKGRIDEALEQ 56
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILA-----PDIYTYNGV 261
F+ M E C PN++TYN ++ +A +D+ LF ++ + A PD+ +Y+ V
Sbjct: 57 FKSMG--EECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTV 114
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+DA K + + RM++ C P+++T++ LID K D++++ + LM K
Sbjct: 115 IDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCK---VDRVDEAYSLLMQLKG 171
Query: 322 KPTLPT---FNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECIITMYGYCDN 375
+ +P +N+++ + + QGK + + MK + + I + ++ D
Sbjct: 172 EDMVPRAMYYNAVVNGFKR---QGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDE 228
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+A + F+ L K GK V T N + C G EA + VTPD TY
Sbjct: 229 QEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSS 288
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+ + KA + + RM + +P+ F+ L FS
Sbjct: 289 IIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFS 329
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 158/355 (44%), Gaps = 12/355 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMR-- 172
L + L + + + LE F+ M ++ + Y+ ++ + K + + LF +M
Sbjct: 40 LIQGLCRKGRIDEALEQFKSMGEECS--PNVITYNTVVNGLCKANRIDEGLELFDDMEKR 97
Query: 173 ---NSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA 229
+ GC PD Y+ +I A KA+ + KA YF++M+ + C PN+VTY+ L+
Sbjct: 98 YEASHGCEPDVISYSTVIDALC----KAQRVDKAYEYFKRMRAV-GCAPNVVTYSSLIDG 152
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
+ VD+ +L +L + P YN V++ + + G E +L MK +
Sbjct: 153 LCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGIN 212
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
II FN ++ + K +K Q F+ L+ S +KP + T+N + KA +A +
Sbjct: 213 IIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILL 272
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
+M K TP ITY II + + +A ++F + T +L + +
Sbjct: 273 EMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHK 332
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA + E+ N G P TY +L A+ E ++ +M++ P+
Sbjct: 333 KSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPD 387
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 158/394 (40%), Gaps = 67/394 (17%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ ++ ++G+ + L M+ G + +NA+ LH K KA +F
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAM----LHALWKNDEQEKACQFF 236
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+++ + KPN+VTYN+ + +A VD+ + E+ ES + PD+ TY+ ++D + K
Sbjct: 237 ERLLKSGK-KPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCK 295
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + + + V +RM ++C P +TF L+ + + + + +V + ++++ P L T
Sbjct: 296 AGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQT 355
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE-- 385
+N ++ A A ++ KM K P TY +I V A+E D
Sbjct: 356 YNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVME 415
Query: 386 -----------------LSKLGK-DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
L K G+ D S L+ ++E C G P EA + E GV
Sbjct: 416 ADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE-ICKAGEPDEAVEVIEQMVLKGVR 474
Query: 428 PDS-----------------------------------STYKLLYKAYTKANMKELVQKL 452
PD TY LL A+M + ++
Sbjct: 475 PDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRI 534
Query: 453 LKRMEQNGIVPNKRFFLEALETFSSSL--AGSQS 484
+ M G P + + T SS L AG Q
Sbjct: 535 FEAMVAAGFTPQA----QTMRTLSSCLRDAGYQD 564
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 157/382 (41%), Gaps = 73/382 (19%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGI------YSKLIAVMGKKGQTRLAMWLFSEMR 172
L K+++ + LE+F M+K+ Y A G YS +I + K + A F MR
Sbjct: 78 LCKANRIDEGLELFDDMEKR--YEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMR 135
Query: 173 NSGCRPDPSVYNALITA--HLHTRDKAKAL----------AKALGYFQKMKGMER-CKP- 218
GC P+ Y++LI + D+A +L +A+ Y + G +R KP
Sbjct: 136 AVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPS 195
Query: 219 ----------------NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
NI+ +N +L A + ++ F+ L +S P++ TYN +
Sbjct: 196 ECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAV 255
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
K G + E +L M ++ PD+IT++ +ID + K DK + VF +M +
Sbjct: 256 HGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECI 315
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P TF +++ + + + +A V + M + P TY ++ D+V A EI
Sbjct: 316 PHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEI 375
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+ ++ + + PD++TY L + +
Sbjct: 376 YHKMKRKKR-----------------------------------QPDANTYAPLIQCLCR 400
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
A + ++ L ME + +VPN
Sbjct: 401 ARRVDEAKEFLDVMEADNVVPN 422
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 138/319 (43%), Gaps = 9/319 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y L+ + K G T A+ L M CRP+ YN +I + K + + +A
Sbjct: 216 DVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLC----KDRQVTEA 271
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
F +M KG+ P+I TYN L+ A V L E+ S + P++ ++ V
Sbjct: 272 FNLFSEMITKGIS---PDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTV 328
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+DA K GMI V+ M +PD++T+ L+D + R D+ +VF +++H
Sbjct: 329 VDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGC 388
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P + ++N +I Y + + KA + ++M+ +TY +I + + A
Sbjct: 389 VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIA 448
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+F E+ G+ + T +L+ C N EA +L + + D Y +
Sbjct: 449 LFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMC 508
Query: 442 KANMKELVQKLLKRMEQNG 460
+A E + L + G
Sbjct: 509 RAGELEAARDLFSNLSCQG 527
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 136/317 (42%), Gaps = 5/317 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++KL+ + K + L ++M + G PD N LI + H R L A
Sbjct: 115 FTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLR----RLGYAFSVL 170
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K+ + C+P+ T+N L+R + + LF + PD+ TY +M+ K
Sbjct: 171 AKLLKLG-CQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 229
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G +L M C+P++I +N +IDS K + + +F ++ P + T
Sbjct: 230 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 289
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+NS+I + +M K P+ + + ++ ++ A ++ D +
Sbjct: 290 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 349
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
K G + V T A+++ +C+ EA +F+ + G P+ +Y +L Y + +
Sbjct: 350 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD 409
Query: 448 LVQKLLKRMEQNGIVPN 464
LL++M G++ +
Sbjct: 410 KAMGLLEQMSLQGLIAD 426
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 130/303 (42%), Gaps = 9/303 (2%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A + +++ GC+PD + +N LI L K + +AL F K G E +P++VTY
Sbjct: 166 AFSVLAKLLKLGCQPDNTTFNTLIRG-LCVEGK---IGEALHLFDKTIG-EGFQPDVVTY 220
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
L+ + N L + + + P++ YN ++D+ K+ + E ++ S M +
Sbjct: 221 GTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMIT 280
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
PDI T+N LI + + + + +++SK P + F++++ K +
Sbjct: 281 KGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAI 340
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAM 401
A V M P +TY + M G+C + A ++FD + G V + N +
Sbjct: 341 AHDVVDMMIKRGVEPDVVTYTAL--MDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNIL 398
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ YC +A L E G+ D+ TY L + L M +G
Sbjct: 399 INGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQ 458
Query: 462 VPN 464
+P+
Sbjct: 459 IPD 461
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 113/253 (44%), Gaps = 8/253 (3%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P++ T NIL+ + R + ++ +L + PD T+N ++ G I E +
Sbjct: 145 PDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHL 204
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
+ +PD++T+ L++ K ++ +S++ +P + +N++I + K
Sbjct: 205 FDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCK 264
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL--GKDM-K 394
R +A +F +M +P TY +I + C N+ + + L+++ K M
Sbjct: 265 DRQVTEAFNLFSEMITKGISPDIFTYNSLI--HALC-NLCEWKHVTTLLNEMVNSKIMPN 321
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT-KANMKELVQKLL 453
V + +++A C G+ A + + GV PD TY L + ++ M E V K+
Sbjct: 322 VVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAV-KVF 380
Query: 454 KRMEQNGIVPNKR 466
M G VPN R
Sbjct: 381 DTMVHKGCVPNVR 393
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 109/265 (41%), Gaps = 1/265 (0%)
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L AL F +M M P+ V + LL + A+ ++ V +L ++ + PD+YT N
Sbjct: 93 LDDALSSFNRMLHMHP-PPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLN 151
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
+++++ + SVL+++ C+PD TFN LI + +F +
Sbjct: 152 ILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGE 211
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
+P + T+ +++ K A + + M P+ I Y II V+ A
Sbjct: 212 GFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEA 271
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+F E+ G + T N+++ A C L N + P+ + + A
Sbjct: 272 FNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDA 331
Query: 440 YTKANMKELVQKLLKRMEQNGIVPN 464
K M + ++ M + G+ P+
Sbjct: 332 LCKEGMIAIAHDVVDMMIKRGVEPD 356
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 5/182 (2%)
Query: 135 MQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR 194
M +R D Y+ L+ + + A+ +F M + GC P+ YN LI +
Sbjct: 347 MMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYC--- 403
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
+ + + KA+G ++M ++ + VTYN L+ + ALF E+ S PD
Sbjct: 404 -QIQRMDKAMGLLEQMS-LQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPD 461
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
+ TY ++D KN + E +L ++ + DI+ +N+ ID + + +F
Sbjct: 462 LVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFS 521
Query: 315 SL 316
+L
Sbjct: 522 NL 523
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 93/212 (43%), Gaps = 9/212 (4%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
++S ++ + K+G +A + M G PD Y AL+ H + + +A+
Sbjct: 324 VFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSE----MDEAVKV 379
Query: 207 FQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
F M KG C PN+ +YNIL+ Q + +D+ L +++ L D TYN ++
Sbjct: 380 FDTMVHKG---CVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHG 436
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
G ++ ++ M ++ PD++T+ +L+D K + + K++ S
Sbjct: 437 LCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDAD 496
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
+ +N I +A A +F ++ +
Sbjct: 497 ILVYNIAIDGMCRAGELEAARDLFSNLSCQGF 528
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 7/203 (3%)
Query: 271 IKEMESVLS---RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+K +VLS +M S PD+ T N+LI+S+ + V L+ +P T
Sbjct: 125 MKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTT 184
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDE 385
FN++I G+A ++F K + P +TY + M G C N S A +
Sbjct: 185 FNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTL--MNGLCKVGNTSAAIRLLRS 242
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ + V N ++++ C + TEA LF G++PD TY L A
Sbjct: 243 MVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCE 302
Query: 446 KELVQKLLKRMEQNGIVPNKRFF 468
+ V LL M + I+PN F
Sbjct: 303 WKHVTTLLNEMVNSKIMPNVVVF 325
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 163/396 (41%), Gaps = 55/396 (13%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L D+ + L++F M K + ++ L+ + ++G+ A+ L M
Sbjct: 157 LLHGLCVEDRISEALDLFHQMCK-----PNVVTFTTLMNGLCREGRVVEAVALLDRMLED 211
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G +P+ Y ++ D AL +KM+ + PN+V YN ++ +
Sbjct: 212 GLQPNQITYGTIVDGMCKMGDTVSAL----NLLRKMEEVSHIIPNVVIYNTIIDGLWKDG 267
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ LF E+ E + PDI TYN +++ + +G + E +L M + PD++TF+
Sbjct: 268 RHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFS 327
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
LI+++ K F + E+++ ++ P+ T++SMI + K AE++F
Sbjct: 328 ALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTK 387
Query: 355 KYTPSFITYECIITMY---------------------------------GYCD--NVSRA 379
+P IT+ +I Y G+C +++ A
Sbjct: 388 GCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAA 447
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM-----------GVTP 428
+++ E+ G V T N +L+ C NG +A +F+ GV P
Sbjct: 448 QDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEP 507
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
D TY +L ++L + M GIVP+
Sbjct: 508 DVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPD 543
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 158/359 (44%), Gaps = 27/359 (7%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
S +W ++ + M +R D +S LI K+G+ A L+ EM P
Sbjct: 301 SGRWSDAEQLLQEML-ERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTV 359
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
Y+++I +++ A A+ + Y KG C P+I+T+N L+ +A+ VD
Sbjct: 360 TYSSMIDGFCK-QNRLDA-AEHMFYLTPTKG---CSPDIITFNTLIAGYCRAKRVDDGIK 414
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
L E+ E+ L + TY ++ + + G + + +L M S+ P+++T N L+D
Sbjct: 415 LLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLC 474
Query: 302 KRQAFDKMEQVFKSLMHSK-----------EKPTLPTFNSMI---INYGKARLQGKAEYV 347
++FK++ SK +P + T+N +I IN GK +AE +
Sbjct: 475 DNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFL---EAEEL 531
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+++M P ITY +I G C + A ++FD + V T N ++ Y
Sbjct: 532 YEEMPHRGIVPDTITYSSMID--GLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGY 589
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
C G+ + LF G+ D+ TY L + K + + + + M +G+ P+
Sbjct: 590 CKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPD 648
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 127/326 (38%), Gaps = 48/326 (14%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
K K+ + E++ M R I T YS +I K+ + A +F GC PD
Sbjct: 335 KEGKFFEAEELYDEMLP-RSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDI 393
Query: 181 SVYNALITAH------------LHTRDKAKALAKALGY-------------------FQK 209
+N LI + LH +A +A + Y Q+
Sbjct: 394 ITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQE 453
Query: 210 MKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL-----------APDIYTY 258
M C PN+VT N LL + +FK + +S + PD+ TY
Sbjct: 454 MISSGVC-PNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTY 512
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N ++ G E E + M PD IT++ +ID K+ D+ Q+F S+
Sbjct: 513 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS 572
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGY--CDNV 376
P + TFN++I Y KA + +F +M ITY I +YG+ DN+
Sbjct: 573 KSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITY--ITLIYGFRKVDNI 630
Query: 377 SRAREIFDELSKLGKDMKVSTLNAML 402
A +IF E+ G T+ ML
Sbjct: 631 DGALDIFQEMISSGVYPDTITIRNML 656
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 102/265 (38%), Gaps = 52/265 (19%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P +VT+N LL + + LF ++ + P++ T+ +M+ + G + E ++
Sbjct: 149 PTVVTFNTLLHGLCVEDRISEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVAL 204
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKR-------QAFDKMEQVFKSLMHSKEKPTLPTFNS 330
L RM + +P+ IT+ ++D K KME+V S P + +N+
Sbjct: 205 LDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEV------SHIIPNVVIYNT 258
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
+I K A +F +M + P +TY C
Sbjct: 259 IIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNC------------------------- 293
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
M+ +C++G ++A+ L + + PD T+ L A+ K +
Sbjct: 294 ----------MINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAE 343
Query: 451 KLLKRMEQNGIVPNKRFFLEALETF 475
+L M I+P+ + ++ F
Sbjct: 344 ELYDEMLPRSIIPSTVTYSSMIDGF 368
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 88/204 (43%), Gaps = 16/204 (7%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYI----------ADTGIYSKLIAVMGKKGQT 161
C L + L + K LE+F+ MQK + I D Y+ LI + +G+
Sbjct: 466 CNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKF 525
Query: 162 RLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV 221
A L+ EM + G PD Y+++I K L +A F M G + P++V
Sbjct: 526 LEAEELYEEMPHRGIVPDTITYSSMIDGLC----KQSRLDEATQMFDSM-GSKSFSPDVV 580
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
T+N L+ +A VD LF E+ + + D TY ++ + K I + M
Sbjct: 581 TFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEM 640
Query: 282 KSNQCKPDIITF-NLLIDSYGKRQ 304
S+ PD IT N+L + K +
Sbjct: 641 ISSGVYPDTITIRNMLTGLWSKEE 664
>gi|255661210|gb|ACU25774.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 426
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 156/327 (47%), Gaps = 5/327 (1%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
++R D YS LI GK+G A+ +M D +Y+ LI D
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+KA++ F ++K P++V YN ++ +A+ + +L E+ E+ + PD
Sbjct: 61 SKAIS----IFSRLK-RAGITPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTV 115
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+Y+ ++ Y +N E SV + M+ +C D+ T N++ID YG+ + +++F S+
Sbjct: 116 SYSTLLTMYVENQKFLEALSVFAEMREIKCLVDLTTCNIMIDVYGQLDMAKEADKLFWSM 175
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P + ++N+++ YG A L G+A ++F+ M + +TY ++ +YG
Sbjct: 176 RKVGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEH 235
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A + E+ G + T + ++ + G A +LF+ + GV D Y+ +
Sbjct: 236 EKANNLIQEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTM 295
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVP 463
AY +A + ++LL +++ +P
Sbjct: 296 IVAYERAGLVAHAKRLLHELKRPDNIP 322
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 147/350 (42%), Gaps = 36/350 (10%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ +I V GK R A L SEMR +G PD Y+ L+T ++ + +A
Sbjct: 78 DLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTLLTMYVEN----QKFLEA 133
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L F +M+ + +C ++ T NI++ Q + + LF + + + P++ +YN ++
Sbjct: 134 LSVFAEMREI-KCLVDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPNVVSYNTLLR 192
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
YG + E + M+ + +++T+N ++ YGK +K + + + + +P
Sbjct: 193 VYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKANNLIQEMHNRGIEP 252
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T++++I +GK +A +FQK+ + + Y+ +I Y V+ A+ +
Sbjct: 253 NAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVAHAKRLL 312
Query: 384 DELSK-------------------------------LGKDMKVSTLNAMLEAYCMNGLPT 412
EL + G+ ++ M++ +
Sbjct: 313 HELKRPDNIPRDTAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIDLFSKYKKYP 372
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+FE +G PDS+ L+ AY K + + + M+ G V
Sbjct: 373 NVVEVFEKMRGLGYFPDSNVISLVLNAYGKLHEFDXANDMYMDMQDEGCV 422
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 108/217 (49%)
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
E L+PD YTY+ ++ +GK G+ + S L +M+ ++ D++ ++ LI+ K +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
K +F L + P L +NSMI +GKA+L +A + +M P ++Y ++
Sbjct: 62 KAISIFSRLKRAGITPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTLL 121
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
TMY A +F E+ ++ + ++T N M++ Y + EAD LF + +G+
Sbjct: 122 TMYVENQKFLEALSVFAEMREIKCLVDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIE 181
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
P+ +Y L + Y A + L + M++ I N
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQN 218
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 129/301 (42%), Gaps = 37/301 (12%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
++ K+L+ L VF M++ + + D + +I V G+ + A LF MR G P+
Sbjct: 126 ENQKFLEALSVFAEMREIKC-LVDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPNV 184
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
YN L+ + A+ +A+ F+ M+ + + N+VTYN ++ + ++ N
Sbjct: 185 VSYNTLLRVY----GDAELFGEAIHLFRLMQRKD-IEQNVVTYNTMMMIYGKTLEHEKAN 239
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
L +E+H + P+ TY+ ++ +GK G + + +++S+ + D + + +I +Y
Sbjct: 240 NLIQEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAY 299
Query: 301 --------GKRQAFD--------------------KMEQ---VFKSLMHSKEKPTLPTFN 329
KR + ++E+ VF+ + + E + F
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFE 359
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
MI + K + VF+KM + Y P ++ YG A +++ ++
Sbjct: 360 RMIDLFSKYKKYPNVVEVFEKMRGLGYFPDSNVISLVLNAYGKLHEFDXANDMYMDMQDE 419
Query: 390 G 390
G
Sbjct: 420 G 420
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 164/354 (46%), Gaps = 24/354 (6%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
E+G+SD+ L +F MQ + Y + + + LI V ++G+ A+ L EM+++
Sbjct: 73 EVGESDRMLA---LFNQMQ-ELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFD 128
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
D +YN I K + A +F +MK P+ VTY ++ +A +D
Sbjct: 129 ADIVLYNVCIDCF----GKVGKVDMAWKFFHEMKA-NGLVPDDVTYTSMMGVLCKANRLD 183
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ +F+++ ++ P Y YN ++ YG G E S+L R ++ C P ++ +N ++
Sbjct: 184 EAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCIL 243
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
GK+ DK ++F+ M P LPT+N +I KA G E F+ AMK
Sbjct: 244 TCLGKKGKTDKALRIFEE-MKRDAMPNLPTYNIIIGMLCKA---GNVEAAFKVRDAMKEA 299
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKL--GKDMKV-----STLNAMLEAYCMNGL 410
F I M D + +A+++ DE + G D KV +T ++++ G
Sbjct: 300 GLFPNVRTINIMI---DRLCKAQKL-DEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGR 355
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+A ++E + P+ Y L + + K + KE K+ K M ++G P+
Sbjct: 356 VDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPD 409
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 163/398 (40%), Gaps = 43/398 (10%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+F G+ D L L+ K + AD +Y+ I GK G+ +A F EM+ +
Sbjct: 105 VFSREGRVDAALSLLDEM----KSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKAN 160
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKG---------------------- 212
G PD Y T+ + KA L +A+ F++M+
Sbjct: 161 GLVPDDVTY----TSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGK 216
Query: 213 -------MER-----CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+ER C P++V YN +L + D+ +F+E+ + P++ TYN
Sbjct: 217 FDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAM-PNLPTYNI 275
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ K G ++ V MK P++ T N++ID K Q D+ +F+ + +
Sbjct: 276 IIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKV 335
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P TF S+I GK A ++++M P+ + Y +I + CD
Sbjct: 336 CSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGH 395
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+++ E+ + G + LN ++ G + LFE G PD+ +Y +L +
Sbjct: 396 KMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSL 455
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
KA +L M+ G V + R + ++ F S
Sbjct: 456 VKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKS 493
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 162/374 (43%), Gaps = 28/374 (7%)
Query: 78 ESKELVRVLMRSFSDKEPLVRTLNKYVKVV----RSEHCFLLFEELGKSDKWLQCLEVFR 133
+ ++ + +MRS P + LN Y+ V +E LFEE+
Sbjct: 393 DGHKMYKEMMRSGC--SPDLMLLNTYMDCVFKAGETEKGRALFEEI-------------- 436
Query: 134 WMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHT 193
K R ++ DT YS LI + K G R L+ M++ GC D YN +I
Sbjct: 437 ---KARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFC-- 491
Query: 194 RDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP 253
K+ + KA ++MK M P +VTY ++ A+ +D+ LF+E + +
Sbjct: 492 --KSGKVNKAYQLLEEMKTMGH-HPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIEL 548
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
+ Y+ ++D +GK G + E V+ M P++ T+N L+D K + ++ F
Sbjct: 549 NQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCF 608
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
+S+ K P T+ +I K R KA +Q+M P+ ITY +I+
Sbjct: 609 QSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKS 668
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
NV++A +F+ G ++ NAM+E + +A LFE + G + + T
Sbjct: 669 GNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTC 728
Query: 434 KLLYKAYTKANMKE 447
L A KA E
Sbjct: 729 VALLDALHKAECLE 742
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 138/346 (39%), Gaps = 39/346 (11%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A L MR+ RP S Y LI A + + LA F +M+ + + N+
Sbjct: 45 AFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLA----LFNQMQELGY-EVNVHLL 99
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
L+R ++ VD +L E+ + DI YN +D +GK G + MK+
Sbjct: 100 TTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKA 159
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
N PD +T+ ++ K D+ ++F+ + +++ P +N+MI+ YG A +
Sbjct: 160 NGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDE 219
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS---------------- 387
A + ++ A PS + Y CI+T G +A IF+E+
Sbjct: 220 AYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAMPNLPTYNIIIGM 279
Query: 388 -----------KLGKDMK-------VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
K+ MK V T+N M++ C EA +FE +PD
Sbjct: 280 LCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPD 339
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+T+ L K + ++ +RM +PN + + F
Sbjct: 340 GATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNF 385
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 167/394 (42%), Gaps = 22/394 (5%)
Query: 95 PLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAV 154
P VRT+N ++ + L K+ K + +F M + D + LI
Sbjct: 303 PNVRTIN------------IMIDRLCKAQKLDEACSIFEGMD-YKVCSPDGATFCSLIDG 349
Query: 155 MGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME 214
+GK+G+ A ++ M ++ P+ VY +LI R+ K K G+ + K M
Sbjct: 350 LGKQGRVDDAYRIYERMLDADQIPNVVVYTSLI------RNFFKCDRKEDGH-KMYKEMM 402
Query: 215 R--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIK 272
R C P+++ N + +A ++ ALF+E+ PD +Y+ ++ + K G +
Sbjct: 403 RSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFAR 462
Query: 273 EMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
E + MK C D +N +ID + K +K Q+ + + PT+ T+ S++
Sbjct: 463 ETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVV 522
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKD 392
K +A +F++ + + + Y +I +G V A + +E+ + G
Sbjct: 523 DGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLT 582
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
V T N +L+ EA + F++ ++ TP+ TY +L K
Sbjct: 583 PNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVF 642
Query: 453 LKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGS 486
+ M++ G+ PN + + + S +Q+ S
Sbjct: 643 WQEMQKQGLKPNTITYTAMISGLAKSGNVAQASS 676
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 156/369 (42%), Gaps = 20/369 (5%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + LGK + ++ M I + +Y+ LI K + ++ EM S
Sbjct: 346 LIDGLGKQGRVDDAYRIYERMLDADQ-IPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRS 404
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC PD L+ ++ KA K F+++K P+ +Y+IL+ + +A
Sbjct: 405 GCSPDL----MLLNTYMDCVFKAGETEKGRALFEEIKA-RGFLPDTRSYSILIHSLVKAG 459
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ L+ + + D YN V+D + K+G + + +L MK+ P ++T+
Sbjct: 460 FARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYG 519
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++D K D+ +F+ + + ++S+I +GK +A V ++M
Sbjct: 520 SVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQK 579
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG--KDMKVSTLNAMLEAYCMNGLP- 411
TP+ T+ C++ D + +A EI + L KD+K T N + +NGL
Sbjct: 580 GLTPNVYTWNCLL------DGLVKAEEINEALVCFQSMKDLK-CTPNQITYCILINGLCK 632
Query: 412 ----TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
+A + ++ G+ P++ TY + K+ L +R +G +P+
Sbjct: 633 VRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSAS 692
Query: 468 FLEALETFS 476
+ +E S
Sbjct: 693 YNAMIEGLS 701
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 67/159 (42%)
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
FD +EQ+ + + PT T ++ + K+R +A + Q M K+ P+F Y
Sbjct: 7 FDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTT 66
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+I R +F+++ +LG ++ V L ++ + G A L + +
Sbjct: 67 LIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNT 126
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
D Y + + K ++ K M+ NG+VP+
Sbjct: 127 FDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPD 165
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 154/341 (45%), Gaps = 5/341 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I + KG+ L EMR G PD YN L+ K L + L
Sbjct: 280 YNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFC----KEGNLHQGLVLL 335
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M G + PN+VTY L+ +A N+ + +F ++ L P+ TY ++D + +
Sbjct: 336 SEMVG-KGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQ 394
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G++ E VLS M + P ++T+N L+ Y + + + ++ P + +
Sbjct: 395 KGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVS 454
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
++++I + + R GKA + ++M P +TY +I + A ++F E+
Sbjct: 455 YSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMM 514
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ G T +++ AYC++G ++A L + G PD+ TY +L K +
Sbjct: 515 RRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTK 574
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAK 488
+ ++LL ++ VP+ + +E S++ S G K
Sbjct: 575 VAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVK 615
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 139/303 (45%), Gaps = 9/303 (2%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A +F +M +G P+ YN +I + D L K LG+ +KM+ E PN+VTY
Sbjct: 191 AERVFRDMVRNGVSPNVYTYNVIIRGVVSQGD----LEKGLGFMRKME-KEGISPNVVTY 245
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
N L+ A + + V + AL + + +A ++ +YN V++ G + E+ ++ M+
Sbjct: 246 NTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRG 305
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
PD +T+N L++ + K + + ++ P + T+ ++I KA +
Sbjct: 306 KGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSR 365
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAM 401
A +F +M P+ TY +I G+C ++ A ++ E+ G V T NA+
Sbjct: 366 AVEIFDQMRVRGLRPNERTYTTLID--GFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNAL 423
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ YC G EA + G+ PD +Y + + + ++ + M + G+
Sbjct: 424 VHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGV 483
Query: 462 VPN 464
+P+
Sbjct: 484 LPD 486
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 149/338 (44%), Gaps = 9/338 (2%)
Query: 145 TGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH-TRDKAKALAKA 203
+ ++ ++ + + G A+ L G P YNA++ A L + + A
Sbjct: 132 SAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDA 191
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F+ M PN+ TYN+++R ++++ +++ + ++P++ TYN ++D
Sbjct: 192 ERVFRDMV-RNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLID 250
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
A K +KE ++L M ++I++N +I+ + ++ ++ + + P
Sbjct: 251 ASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVP 310
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T+N+++ + K + + +M +P+ +TY +I N+SRA EIF
Sbjct: 311 DEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIF 370
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
D++ G T +++ +C GL EA + G +P TY L Y
Sbjct: 371 DQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFL 430
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
+ +L+ M + G+ P+ + ++S+ +AG
Sbjct: 431 GRVQEAVGILRGMVERGLPPD-------VVSYSTVIAG 461
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 147/320 (45%), Gaps = 11/320 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI KK + + AM L M G + YN++I L + + + + +
Sbjct: 245 YNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVING-LCGKGRMSEVGELV--- 300
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M+G + P+ VTYN L+ + N+ Q L E+ L+P++ TY +++ K
Sbjct: 301 EEMRG-KGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCK 359
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + + +M+ +P+ T+ LID + ++ ++ +V ++ S P++ T
Sbjct: 360 AGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVT 419
Query: 328 FNSMIINYG-KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFD 384
+N+++ Y R+Q +A + + M P ++Y +I G+C + +A ++ +
Sbjct: 420 YNALVHGYCFLGRVQ-EAVGILRGMVERGLPPDVVSYSTVIA--GFCRERELGKAFQMKE 476
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E+ + G T +++++ C+ EA LF G+ PD TY L AY
Sbjct: 477 EMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDG 536
Query: 445 MKELVQKLLKRMEQNGIVPN 464
+L M Q G +P+
Sbjct: 537 ELSKALRLHDEMVQRGFLPD 556
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 148/366 (40%), Gaps = 57/366 (15%)
Query: 130 EVFRWMQKQRW--YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
EV +++ R + D Y+ L+ K+G + L SEM G P+ Y LI
Sbjct: 295 EVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLI 354
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
KA L++A+ F +M+ + +PN TY L+ Q +++ + E+
Sbjct: 355 NCMC----KAGNLSRAVEIFDQMR-VRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMI 409
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
S +P + TYN ++ Y G ++E +L M PD+++++ +I + + +
Sbjct: 410 VSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELG 469
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
K Q+ + ++ P T++S+I + +A +F++M P +TY +I
Sbjct: 470 KAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLI 529
Query: 368 TMYGYCDNVSRAREIFDELSKLG------------------------------------- 390
Y +S+A + DE+ + G
Sbjct: 530 NAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESV 589
Query: 391 -KDMKVSTL------------NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
D+ +TL +++ +CM GL EAD +F+ P+++ Y L+
Sbjct: 590 PDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMI 649
Query: 438 KAYTKA 443
+++
Sbjct: 650 HGHSRG 655
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 81/199 (40%), Gaps = 24/199 (12%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
++ + DT YS LI + + + A LF EM G PD Y +LI A+ +
Sbjct: 480 EKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGE-- 537
Query: 198 KALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
L+KAL +M +G P+ VTY++L+ + L +L PD
Sbjct: 538 --LSKALRLHDEMVQRGF---LPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDD 592
Query: 256 YTYN---------------GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
TYN G++ + G++ E + V M KP+ +NL+I +
Sbjct: 593 VTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGH 652
Query: 301 GKRQAFDKMEQVFKSLMHS 319
+ K ++ L HS
Sbjct: 653 SRGGNVHKAYNLYMELEHS 671
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 10/154 (6%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
QR ++ D YS LI + KK +T++A L ++ PD YN LI + K+
Sbjct: 550 QRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKS 609
Query: 198 -KALAKALGYFQKMKGMERC---------KPNIVTYNILLRACAQARNVDQVNALFKELH 247
+ L K M +R KPN YN+++ ++ NV + L+ EL
Sbjct: 610 VEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELE 669
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
S A ++ A + GM E+ +L +
Sbjct: 670 HSSFACHTVAVIALVKALAREGMNDELSRLLQNI 703
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 25/222 (11%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + L K ++ ++FR M + R D Y+ LI G+ A+ L EM
Sbjct: 493 LIQGLCLQQKLVEAFDLFREMMR-RGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQR 551
Query: 175 GCRPDPSVYNALITA-HLHTRDK-AKALAKALGYFQKMKGMERCKPNIVTYNILLRACA- 231
G PD Y+ LI + R K AK L L Y E P+ VTYN L+ C+
Sbjct: 552 GFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFY-------EESVPDDVTYNTLIENCSN 604
Query: 232 -QARNVD-------------QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
+ ++V+ + + +FK + + P+ YN ++ + + G + + ++
Sbjct: 605 NEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNL 664
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
++ + + L+ + + D++ ++ ++++ S
Sbjct: 665 YMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRS 706
>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840-like [Vitis vinifera]
Length = 1131
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 154/365 (42%), Gaps = 46/365 (12%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH---TR 194
++ ++ D + S LI + ++G A+ F + G + ++NALI TR
Sbjct: 443 RKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTR 502
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF----------- 243
D K + GM + P++VTY +L++ A+ +D+ ALF
Sbjct: 503 DGLKMYI--------LMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPD 554
Query: 244 ------------------------KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
K + + + PDI YN +++ + + G ++ + +L
Sbjct: 555 HIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLR 614
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
+ +PDI+T+N +I Y + F K ++F+ L + +P TF +I Y K
Sbjct: 615 EIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDG 674
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLN 399
A +F M P+ +TY C+I Y +N A E+++++ + + +
Sbjct: 675 RMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYS 734
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
+++ C GL EA L F+ + + PD Y +L + Y K L M N
Sbjct: 735 ILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVN 794
Query: 460 GIVPN 464
GI+P+
Sbjct: 795 GIMPD 799
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 177/424 (41%), Gaps = 31/424 (7%)
Query: 26 SSSSSSFNQSSSQNYNFTHRHIPLSLRTRPRTGICCVWTRPRSKRGRKSEELESKELVRV 85
SS F +S + F I L P +C + S++G E L
Sbjct: 419 SSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEAL-------- 470
Query: 86 LMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADT 145
R F TLN Y+ + CF L ++ L+ + + M K I D
Sbjct: 471 --RFFFQAVKRGLTLNNYLFNALIDGCF----RLKRTRDGLK-MYILMGMYK---VIPDV 520
Query: 146 GIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALG 205
Y+ L+ + ++G+ A+ LF ++ G PD +Y LI RD A L
Sbjct: 521 VTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQ---- 576
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
F+ M+ P+I YN+L+ + V+ V L +E+ + L PDI TYN ++ Y
Sbjct: 577 IFKLMQS-NGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGY 635
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ + + +K + +P+ ITF +LID+Y K D +F S++ +P +
Sbjct: 636 CSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNI 695
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T++ +I Y K A +++KM + +P+ ++Y +I G C
Sbjct: 696 LTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILID--GLCKKGLMEEASLAF 753
Query: 386 LSKLGKDM--KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+G+ + V ++ YC G EA +L+++ G+ PD LL KA +
Sbjct: 754 QCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDD----LLQKALAEY 809
Query: 444 NMKE 447
++
Sbjct: 810 GFQD 813
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 147/331 (44%), Gaps = 13/331 (3%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
++ + D IYS LI + + G+ LFS G + D ++++++ A++ D
Sbjct: 303 EKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLG 362
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
KA+ Y + +K E PN+VTY+IL+ + V + +F ++ + L P + T
Sbjct: 363 KAIEV---YTRMLK--EGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLT 417
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y+ ++D + K+ +++ + M PD++ ++LI+ ++ D+ + F +
Sbjct: 418 YSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAV 477
Query: 318 HSKEKPTLPTFNSMIINYGKARLQ----GKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
FN++I G RL+ G Y+ M K P +TY ++
Sbjct: 478 KRGLTLNNYLFNALI--DGCFRLKRTRDGLKMYILMGMY--KVIPDVVTYTVLVKGLAEQ 533
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ A +F +L K G +++ +C P +F+ + G+ PD Y
Sbjct: 534 GRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIY 593
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+L + + E V +LL+ + + G+ P+
Sbjct: 594 NVLINMFFREGCVENVLELLREIIKYGLEPD 624
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 148/343 (43%), Gaps = 17/343 (4%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
++ F WM K I+ S+++ ++ + + + + EM C+ VY +
Sbjct: 160 VDTFAWMSKMGVSISHYAA-SEMLDLLIDSDRIDVILENYEEM----CK-GLGVYEFVFN 213
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELH 247
+ L K + K L + + + +ER P IV N +L+ + + F +
Sbjct: 214 SFL----KRGEVEKGLNFHRAL--VERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMV 267
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
S +P++ T++ +++ Y K + E S+ + M PD++ +++LI+ + +
Sbjct: 268 RSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLE 327
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
+ +F + K + F+S++ Y + GKA V+ +M +P+ +TY +I
Sbjct: 328 EGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILI 387
Query: 368 TMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
G C N V A +F ++ K G + V T +++++ +C + + L+ G
Sbjct: 388 N--GLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKG 445
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
PD +L ++ M + + + + G+ N F
Sbjct: 446 HVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLF 488
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 154/364 (42%), Gaps = 35/364 (9%)
Query: 130 EVFRWMQKQRWY-IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
E R + R Y + D Y+ LI + KK + AM M N GC PD YN +I
Sbjct: 240 EAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIID 299
Query: 189 AH--LHTRDKAKALAK----------ALGYFQKMKGM------ERC------------KP 218
+ + +A L K + Y + G+ ER KP
Sbjct: 300 GYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKP 359
Query: 219 NIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
+IV YN L++ C Q + + + E+ E PDI TYN V++ K G I + V
Sbjct: 360 DIVVYNSLVKGLCLQGLILHALQVM-NEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 418
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
++ PD+ TFN LID Y KR D Q+ + + P T+NS++ K
Sbjct: 419 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 478
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
A + FQ+M P+ ITY +I + + + A ++ ++S+ G +
Sbjct: 479 AGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVS 538
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT-KANMKELVQKLLKRM 456
N ++ +C NG A LLF+ G + + T+ L A++ K NM + +K+ M
Sbjct: 539 FNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNM-HMAEKIFDEM 597
Query: 457 EQNG 460
G
Sbjct: 598 LSKG 601
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 152/343 (44%), Gaps = 15/343 (4%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
+ ++ D Y LI + +G A+ LF+E + G +PD VYN+L+ K
Sbjct: 320 KGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLV--------KGL 371
Query: 199 AL-AKALGYFQKMKGM--ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
L L Q M M E C P+I TYNI++ + N+ + + PD+
Sbjct: 372 CLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDV 431
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
+T+N ++D Y K + ++ RM PD IT+N +++ K +++ + F+
Sbjct: 432 FTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQE 491
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
++ P T+N +I N+ ++ +A V KM+ P +++ +I YG+C N
Sbjct: 492 MILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLI--YGFCRN 549
Query: 376 --VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ A +F +L + G T N ++ A+ A+ +F+ + G DS TY
Sbjct: 550 GDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTY 609
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
++L K + L M + G +P+ F + + +
Sbjct: 610 RVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 652
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 148/341 (43%), Gaps = 18/341 (5%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
LE+F Q + D +Y+ L+ + +G A+ + +EM GC PD YN +I
Sbjct: 346 LELFNEAQA-KGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 404
Query: 189 AHL---HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
+ D + A+ MKG P++ T+N L+ + +D L +
Sbjct: 405 GLCKMGNISDATVVMNDAI-----MKGY---LPDVFTFNTLIDGYCKRLKLDSALQLVER 456
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ E +APD TYN V++ K G + E+ M C P+ IT+N+LI+++ +
Sbjct: 457 MWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNK 516
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR---LQGKAEYVFQKMTAMKYTPSFIT 362
++ +V + P +FN++I YG R L+G A +FQK+ Y+ + T
Sbjct: 517 MEEASKVIVKMSQEGLHPDAVSFNTLI--YGFCRNGDLEG-AYLLFQKLEEKGYSATADT 573
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
+ +I + N+ A +IFDE+ G T +++ C A +
Sbjct: 574 FNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMI 633
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
G P ST+ + + T + ++ M + G+VP
Sbjct: 634 KKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 674
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 127/320 (39%), Gaps = 13/320 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + G+ + R+ R P+ + L A + +A L A+ F
Sbjct: 18 YCALIRPLASAGRVDAVDAAVASARS---RLSPATIHPLYVASIRAYARAGRLRDAVDAF 74
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M + C P YN ++ A A DQ + ++ + + ++PD++T+ + ++
Sbjct: 75 ERMD-LFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSF-- 131
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ L +++ + + ++ Y D Q+F ++H+ P L
Sbjct: 132 -CLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDA-RQLFDQMLHTHVFPNLAA 189
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRAREIFDE 385
FN ++ K +A + K+ + + TY I + G C+ + A + D
Sbjct: 190 FNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYN--IWIRGLCEAGRLPEAVRLVDG 247
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ V T N ++ C +P EA N G PD TY + Y K +M
Sbjct: 248 MRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISM 306
Query: 446 KELVQKLLKRMEQNGIVPNK 465
+ +LLK G VP++
Sbjct: 307 VQEATELLKDAVFKGFVPDQ 326
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 131/368 (35%), Gaps = 84/368 (22%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y I + G+ R A+ F M C P YNA++ AL A +
Sbjct: 53 LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIM----------DALVDAAYH 102
Query: 207 FQKMKGMER-----CKPNIVTYNILLRA-CAQAR-------------------------- 234
Q K R P++ T+ I LR+ C AR
Sbjct: 103 DQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGL 162
Query: 235 ----NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS------- 283
+ LF ++ + + P++ +N V+ A K G + E +L ++
Sbjct: 163 YAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINL 222
Query: 284 --------NQCK-------------------PDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
C+ PD++T+N LI K+ + + +
Sbjct: 223 FTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRM 282
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--D 374
M+ P T+N++I Y K + +A + + + P +TY +I G C
Sbjct: 283 MNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLIN--GLCAEG 340
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
+V RA E+F+E G + N++++ C+ GL A + G PD TY
Sbjct: 341 DVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYN 400
Query: 435 LLYKAYTK 442
++ K
Sbjct: 401 IVINGLCK 408
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 155/342 (45%), Gaps = 10/342 (2%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
S+ W+ F+W + Q Y Y+ ++ ++GK + L L EM G
Sbjct: 130 SNDWIPAFGFFKWAKAQTGYRHSMNSYNSMVDILGKLKKFDLMWELVEEMDRLGG----- 184
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMER--CKPNIVTYNILLRACAQARNVDQV 239
Y +L T R A+A ++ + +GMER K + + N L+ A + +V+
Sbjct: 185 -YVSLATMTKVMRRLARA-SRWKDAIEAFRGMERFGVKKDTLAMNTLMDALVKENSVEHA 242
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
N +F E +SIL + +T+N ++ + K + ++ MK + PD+I++ ++++
Sbjct: 243 NDVFVEFKDSILL-NPHTFNVLIHGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEA 301
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
Y + + F K+ V + P + T+ ++ GK + KA V++KM P
Sbjct: 302 YCREKDFRKVNSVLNEMEEKGCPPNVVTYTIVMHALGKGKEISKALEVYEKMKGSSCVPD 361
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
Y +I + + AR++F++++K G V T N M+ A CM+ +A L
Sbjct: 362 TSFYSSLIYILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLL 421
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
PD +TY L K + N +++ LL M +N I
Sbjct: 422 KMEESSCKPDLNTYSPLLKMCCRNNRMKVLSALLNHMFKNDI 463
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 157/346 (45%), Gaps = 12/346 (3%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIA-DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
L ++ +W +E FR M+ R+ + DT + L+ + K+ A +F E ++S
Sbjct: 198 LARASRWKDAIEAFRGME--RFGVKKDTLAMNTLMDALVKENSVEHANDVFVEFKDS-IL 254
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
+P +N LI H KA+ + AL +MK C P++++Y ++ A + ++
Sbjct: 255 LNPHTFNVLI----HGWCKARKMDNALKSMAEMKEHGFC-PDVISYTSIVEAYCREKDFR 309
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+VN++ E+ E P++ TY VM A GK I + V +MK + C PD ++ LI
Sbjct: 310 KVNSVLNEMEEKGCPPNVVTYTIVMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLI 369
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
K VF+ + P + T+N+MI + A + KM
Sbjct: 370 YILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKMEESSCK 429
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P TY ++ M + + + + + K ++V T + ++ C +G A L
Sbjct: 430 PDLNTYSPLLKMCCRNNRMKVLSALLNHMFKNDISLEVGTYSLLVHGLCKSGKLEHACLF 489
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANM---KELVQKLLKRMEQNG 460
FE + G+ P T+KLL K K +M KE V+KL+ + Q G
Sbjct: 490 FEEMVSKGLVPKDCTHKLLLKELEKKSMVEAKERVEKLMSQARQQG 535
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 89/176 (50%), Gaps = 8/176 (4%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ LGK + + LEV+ M K + DT YS LI ++ K G+ + A +F +M
Sbjct: 332 IVMHALGKGKEISKALEVYEKM-KGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTK 390
Query: 174 SGCRPDPSVYNALITAH-LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
G PD YN +I+A +H++++ AL KM+ CKP++ TY+ LL+ C +
Sbjct: 391 QGAIPDVLTYNTMISAACMHSQEE-----DALKLLLKMEE-SSCKPDLNTYSPLLKMCCR 444
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
+ ++AL + ++ ++ ++ TY+ ++ K+G ++ M S P
Sbjct: 445 NNRMKVLSALLNHMFKNDISLEVGTYSLLVHGLCKSGKLEHACLFFEEMVSKGLVP 500
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 155/367 (42%), Gaps = 46/367 (12%)
Query: 115 LFEELGKSDKWLQCLEVFRWM-QKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
L E L K ++W + E+ R M + D YS L++ K G+ + L E+ +
Sbjct: 51 LLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVIS 110
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER--CKPNIVTYNILLRACA 231
G RPD +Y ++ + + A+ + ++ M R C P ++T+N L+ C
Sbjct: 111 RGLRPDALMYTKVMASLCKS-------ARLGEALELLEEMIRAGCCPTLITFNTLISGCC 163
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ +N++ ++L + + S + D+ TYN +MD K G ++E E +L RMK++ C PD++
Sbjct: 164 REKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVV 223
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
++ + K QV + + S P + T+N+++ K+ GK + + M
Sbjct: 224 AYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKS---GKIDTALEMM 280
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV-STLNAMLEAYCMNGL 410
M + C + + GY + D L KLG+ + S + AM A C
Sbjct: 281 EQMASSDG-----CGLNVVGY-------STVVDGLCKLGRTQEARSVMEAMARAGC---- 324
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
PD TY L KA E + ++ M G PN +
Sbjct: 325 ----------------RPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCS 368
Query: 471 ALETFSS 477
+ S
Sbjct: 369 LVHGLCS 375
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 146/323 (45%), Gaps = 14/323 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA--HLHTRDKAKALAKALG 205
++ L+ K+G+ L M G +P+ YN L+ L +A+ L + +
Sbjct: 13 FNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDM- 71
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+ R P++VTY+ LL +A V++ L KE+ L PD Y VM +
Sbjct: 72 ----ISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASL 127
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K+ + E +L M C P +ITFN LI + + + + + +++ S K +
Sbjct: 128 CKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADV 187
Query: 326 PTFNSMIINYGKA-RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREI 382
T+N+++ KA RLQ +AE + ++M A P + Y + YG C + V A ++
Sbjct: 188 VTYNTLMDGLCKAGRLQ-EAEQLLERMKASGCAPDVVAYSSFV--YGLCKSGKVLNAHQV 244
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNG-LPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+++ D V T N +L+ C +G + T +++ + + + G + Y +
Sbjct: 245 LEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLC 304
Query: 442 KANMKELVQKLLKRMEQNGIVPN 464
K + + +++ M + G P+
Sbjct: 305 KLGRTQEARSVMEAMARAGCRPD 327
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 111/258 (43%), Gaps = 10/258 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + L K+ + + ++ M K D YS + + K G+ A + +MR+S
Sbjct: 193 LMDGLCKAGRLQEAEQLLERM-KASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDS 251
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
P+ YN ++ K+ + AL ++M + C N+V Y+ ++ +
Sbjct: 252 DHDPNVVTYNTILDGLC----KSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLG 307
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ ++ + + + PD+ TY+ +++ K G I+E + M CKP+ +T+
Sbjct: 308 RTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYC 367
Query: 295 LLID---SYGKRQAFDKM--EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
L+ S G+ ++M E P++ T+N++I KA A FQ
Sbjct: 368 SLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQ 427
Query: 350 KMTAMKYTPSFITYECII 367
+M + P ++Y I+
Sbjct: 428 RMRSQGCDPDGVSYSTIV 445
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 111/253 (43%), Gaps = 6/253 (2%)
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
C PN VT+N L+ ++ L + + + P++ +YNG+++ K E E
Sbjct: 6 CPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAE 65
Query: 276 SVLSRM--KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
++ M + + PD++T++ L+ Y K ++ ++ K ++ +P + ++
Sbjct: 66 ELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMA 125
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGK 391
+ K+ G+A + ++M P+ IT+ +I+ G C N+ A + ++ G
Sbjct: 126 SLCKSARLGEALELLEEMIRAGCCPTLITFNTLIS--GCCREKNLEMADSLLQTMAASGV 183
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
V T N +++ C G EA+ L E G PD Y K+ +
Sbjct: 184 KADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQ 243
Query: 452 LLKRMEQNGIVPN 464
+L++M + PN
Sbjct: 244 VLEQMRDSDHDPN 256
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 8/130 (6%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS L+ + K G+ A+ EM GC+P+ Y +L+ H LA+A
Sbjct: 327 DVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLV----HGLCSCGRLAEA 382
Query: 204 LGYFQKMKGM----ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
++M + C P++ TYN L+ +A +D F+ + PD +Y+
Sbjct: 383 ERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYS 442
Query: 260 GVMDAYGKNG 269
+++ ++G
Sbjct: 443 TIVEGLARSG 452
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 172/397 (43%), Gaps = 27/397 (6%)
Query: 72 RKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEV 131
R +ES L+ ++R + + ++ T K+++ F + K+ + ++ LE
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCT-----KLIKG---FFTLRNIPKAVRVMEILEK 152
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
F D Y+ LI K + A + MR+ PD YN +I L
Sbjct: 153 FGQ--------PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMI-GSL 203
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
+R K K L + C+P ++TY IL+ A VD+ L E+ L
Sbjct: 204 CSRGKLDLALKVLNQLLS----DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGL 259
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
PD++TYN ++ K GM+ ++ ++ C+PD+I++N+L+ + + +++ E+
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEK 319
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECIIT 368
+ + K P + T++ +I + GK E + MK TP +Y+ +I
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCR---DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIA 376
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
+ + A E + + G + N +L C NG +A +F +G +P
Sbjct: 377 AFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 436
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+SS+Y ++ A + K ++ M NGI P++
Sbjct: 437 NSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDE 473
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 156/348 (44%), Gaps = 9/348 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALG 205
Y+ LI +G A+ L EM + G +PD YN +I D+A + + L
Sbjct: 231 YTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNL- 289
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
++KG C+P++++YNILLRA ++ L ++ P++ TY+ ++
Sbjct: 290 ---ELKG---CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
++G I+E ++L MK PD +++ LI ++ + D + ++++ P +
Sbjct: 344 CRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
+N+++ K +A +F K+ + +P+ +Y + + + RA + E
Sbjct: 404 VNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ G D T N+M+ C G+ EA L + + P TY ++ + KA+
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523
Query: 446 KELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTR 493
E +L+ M NG PN+ + +E + +++ DL R
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 112/243 (46%), Gaps = 7/243 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS LI + + G+ AM L M+ G PD Y+ LI A + L A+ +
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC----REGRLDVAIEFL 391
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ M + C P+IV YN +L + DQ +F +L E +P+ +YN + A
Sbjct: 392 ETMIS-DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 268 NG-MIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+G I+ + +L M SN PD IT+N +I + D+ ++ + + P++
Sbjct: 451 SGDKIRALHMIL-EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T+N +++ + KA A V + M P+ TY +I G+ + A E+ ++L
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Query: 387 SKL 389
++
Sbjct: 570 VRI 572
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 136/317 (42%), Gaps = 5/317 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + G A+ LFSE+R+ P YN LI T + L A G
Sbjct: 350 YNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGN----LDIAKGMK 405
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
M C P++VT+ IL+R Q N+ LF E+ L PD Y + K
Sbjct: 406 DDMIKHGLC-PDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELK 464
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + + MK+ PD+IT+N+LI+ K FD ++ + + P T
Sbjct: 465 LGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVT 524
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ S+I + + L KAE VF M PS +TY +I Y + A++ FDE+
Sbjct: 525 YTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQ 584
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G V T NA++ C + A LF + GV+P+ TY +L + +
Sbjct: 585 DKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQ 644
Query: 448 LVQKLLKRMEQNGIVPN 464
KL K M I P+
Sbjct: 645 DALKLYKDMLDREIKPD 661
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 144/355 (40%), Gaps = 44/355 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI KK A L EM G P YN + +++ + ++ A Y
Sbjct: 280 YNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTI----MYSLCRLGRVSDARRYL 335
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
M E P++V+YN L+ ++ N + LF EL L P + TYN ++D +
Sbjct: 336 DVMVN-EDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCR 394
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + + + M + PD++TF +L+ + + +++F ++ KP
Sbjct: 395 TGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIA 454
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC-------------- 373
+ + I+ K KA + ++M A + P ITY +I G C
Sbjct: 455 YTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLIN--GLCKLGNFDDANELVQK 512
Query: 374 --------DNVS---------------RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
D+V+ +A E+F ++ K G V T ++ +Y + G
Sbjct: 513 MRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGR 572
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
A F+ + GV+P+ TY L K NM ++ L ME G+ PNK
Sbjct: 573 LDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNK 627
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 150/354 (42%), Gaps = 18/354 (5%)
Query: 126 LQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSE-------------MR 172
L L FRW++KQ + + ++ ++ K G + A W+ + +
Sbjct: 66 LTALRFFRWVEKQPNFHRSETAFVAILDILAKNGFMKPAYWVMEKAIEVKVDGGVLDVLV 125
Query: 173 NSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
GC + V L+ + K L K L F KM P++ N +L+
Sbjct: 126 GIGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVN-NGLLPDVRNCNRVLKLLKD 184
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
V++V ++ + + + P I T+N +MD+ K G + VL M+ C P+ ++
Sbjct: 185 KSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVS 244
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N+L++ + FD+ +++ + + K + T+N +I + K + +A + ++M
Sbjct: 245 YNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREML 304
Query: 353 AMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
P+ +TY I MY C VS AR D + + + N ++ Y G
Sbjct: 305 GRGALPTVVTYNTI--MYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGN 362
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA LLF + + P TY L + ++ + + M ++G+ P+
Sbjct: 363 FAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPD 416
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 138/322 (42%), Gaps = 10/322 (3%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
LL + K +CL VF M + D ++++ ++ K ++S M
Sbjct: 142 LLIQVFAKKLILEKCLMVFYKMVNN-GLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIK 200
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
RP +N + + +R K + +A+ M+ M C PN V+YN+L+ +
Sbjct: 201 CQIRPTIVTFNTM----MDSRCKEGEVGRAVEVLDVMR-MFGCDPNDVSYNVLVNGLSGK 255
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
D+ L +++ L +TYN ++ + K M +E + M P ++T+
Sbjct: 256 GEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTY 315
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE--YVFQKM 351
N ++ S + + +++ P L ++N++I YG +RL AE +F ++
Sbjct: 316 NTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLI--YGYSRLGNFAEALLLFSEL 373
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+ PS +TY +I N+ A+ + D++ K G V T ++ +C G
Sbjct: 374 RSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNL 433
Query: 412 TEADLLFENSHNMGVTPDSSTY 433
A LF+ + G+ PD Y
Sbjct: 434 PMAKELFDEMLSRGLKPDCIAY 455
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K + D Y+ LI + K G A L +MR G PD Y ++I AHL
Sbjct: 479 KAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHL----I 534
Query: 197 AKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
+ L KA F M KG+ P++VTY +L+ + A +D F E+ + ++P+
Sbjct: 535 SGLLRKAEEVFSDMLKKGIH---PSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPN 591
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
+ TYN ++ K M+ ++ + M+S P+ T+ +LI+ Q + +++K
Sbjct: 592 VITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYK 651
Query: 315 SLMHSKEKPTLPTFNSMI 332
++ + KP T ++++
Sbjct: 652 DMLDREIKPDSCTHSALM 669
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 88/224 (39%), Gaps = 40/224 (17%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++ L+ + G +A LF EM + G +PD Y I L K +KA
Sbjct: 416 DVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGEL----KLGNPSKA 471
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
G ++MK E P+++TYN+L+ + N D N L +++ + PD TY ++
Sbjct: 472 FGMKEEMKA-EGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIH 530
Query: 264 AYGKNGMIKEMESVLS-----------------------------------RMKSNQCKP 288
A+ +G++++ E V S M+ P
Sbjct: 531 AHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSP 590
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
++IT+N LI K D +F + P T+ +I
Sbjct: 591 NVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILI 634
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 6/139 (4%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
EVF M K+ + Y+ LI +G+ A F EM++ G P+ YNALI
Sbjct: 543 EVFSDMLKKGIH-PSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALI-- 599
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
+ K + A F +M+ + PN TY IL+ + + L+K++ +
Sbjct: 600 --YGLCKENMMDVAYNLFAEMES-KGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDR 656
Query: 250 ILAPDIYTYNGVMDAYGKN 268
+ PD T++ +M K+
Sbjct: 657 EIKPDSCTHSALMKHLSKD 675
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 139/303 (45%), Gaps = 7/303 (2%)
Query: 129 LEVFRWMQKQRWYIA-DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
L++ + M KQ + D YS +I +G+T A LF EM G +PD YN +I
Sbjct: 248 LDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLII 307
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
A KA+A+ KA ++M + +P+ VTY+ ++ A + + +F+E+
Sbjct: 308 DALC----KARAMDKAELVLRQMT-TDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMK 362
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
+ L P+I T N + + K+G KE M + KPDI ++ L+ Y F
Sbjct: 363 KRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFA 422
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
M +F S+ + F +I Y K + A +F +M +P +TY +I
Sbjct: 423 DMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVI 482
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
+ + ++ A E F+++ G + +++++ +CM+G +A L N G+
Sbjct: 483 STFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIP 542
Query: 428 -PD 429
PD
Sbjct: 543 RPD 545
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 149/332 (44%), Gaps = 10/332 (3%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K A+ +++ LI K+G AM +F+EM+ G PD Y+ +I+ T +
Sbjct: 432 KSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVIS----TFSR 487
Query: 197 AKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKE-LHESILAP 253
L A+ F +M +G++ PN Y+ +++ + + L E +++ I P
Sbjct: 488 MGRLTDAMEKFNQMVARGIQ---PNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRP 544
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF 313
DI ++ V+++ K+G + + + +P +ITFN LID Y DK ++
Sbjct: 545 DIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKIL 604
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
++ +P + T+N+++ Y K +F++M P+ +TY ++
Sbjct: 605 DAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRA 664
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
AR+ F E+ + G + VS +L C N EA +LF+ M V +
Sbjct: 665 GRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITIL 724
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+ A K KE ++L + +G++PN+
Sbjct: 725 NTMINAMYKVQRKEEAKELFATISASGLLPNE 756
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 156/364 (42%), Gaps = 16/364 (4%)
Query: 111 HCF-LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFS 169
H F +L K + +F MQ+Q D YS +I+ + G+ AM F+
Sbjct: 441 HVFTILIHAYAKRGMVDDAMLIFTEMQQQ-GVSPDVVTYSTVISTFSRMGRLTDAMEKFN 499
Query: 170 EMRNSGCRPDPSVYNALITAH-LHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNIL 226
+M G +P+ +VY+++I +H L KA +M KG+ R P+IV ++ +
Sbjct: 500 QMVARGIQPNTAVYSSIIQGFCMH-----GGLVKAKELVSEMINKGIPR--PDIVFFSSV 552
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+ + + V + +F + P + T+N ++D Y G + + +L M+
Sbjct: 553 INSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGV 612
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
+PDI+T+N L+D Y K + +F+ + KP T+ M+ +A A
Sbjct: 613 EPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARK 672
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEA 404
F +M T + Y I + G C N A +F +L + ++ LN M+ A
Sbjct: 673 KFHEMIESGTTVTVSIYG--IILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINA 730
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA LF G+ P+ STY ++ K E + ME++GIVP
Sbjct: 731 MYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPG 790
Query: 465 KRFF 468
R
Sbjct: 791 SRLL 794
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 144/333 (43%), Gaps = 10/333 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + + L + LF + +G + D N L+ + +A+ L
Sbjct: 160 YNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNVLLHRM 219
Query: 208 QKMKGMERCKPNIVTYNILLRA-CAQA---RNVDQVNALFKELHESILAPDIYTYNGVMD 263
++ C PN V+Y+I+L+A C + R +D + + K+ +PD+ Y+ V+
Sbjct: 220 SELG----CVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQ--GGACSPDVVAYSTVIH 273
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ G + S+ M KPD++T+NL+ID+ K +A DK E V + + +P
Sbjct: 274 GFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQP 333
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T++ MI Y +A +F++M P+ +T + A E F
Sbjct: 334 DTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFF 393
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
D ++ G + + +L Y G + LF + + G+ + + +L AY K
Sbjct: 394 DSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKR 453
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
M + + M+Q G+ P+ + + TFS
Sbjct: 454 GMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFS 486
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 132/311 (42%), Gaps = 7/311 (2%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
L M GC P+ Y+ ++ A +AL L K G C P++V Y+ +
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRAL-DLLQMMAKQGGA--CSPDVVAYSTV 271
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+ + +LF E+ + PD+ TYN ++DA K + + E VL +M ++
Sbjct: 272 IHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGA 331
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
+PD +T++ +I Y + ++F+ + P + T NS + + K +A
Sbjct: 332 QPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAE 391
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI--FDELSKLGKDMKVSTLNAMLEA 404
F MTA + P +Y C + ++GY A I F+ + G ++ A
Sbjct: 392 FFDSMTAKGHKPDIFSY-CTL-LHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHA 449
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y G+ +A L+F GV+PD TY + +++ + +M GI PN
Sbjct: 450 YAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPN 509
Query: 465 KRFFLEALETF 475
+ ++ F
Sbjct: 510 TAVYSSIIQGF 520
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 120/312 (38%), Gaps = 46/312 (14%)
Query: 201 AKALGYFQKM----KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
A AL F ++ G + P TYNIL+ C +AR D ALF + + L D
Sbjct: 134 ALALALFNRVCREEAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQI 193
Query: 257 TYNGVMDAYGKNGMIKEMESVL-SRMKSNQCKPDIITFNL----LIDSYGKRQAFDKMEQ 311
T N ++ +E +VL RM C P+ +++++ L D+ ++A D ++
Sbjct: 194 TANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQM 253
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE------- 364
+ K P + ++++I + GKA +F +MT P +TY
Sbjct: 254 MAKQ--GGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALC 311
Query: 365 ----------------------------CIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
C+I Y + A ++F E+ K G +
Sbjct: 312 KARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIV 371
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
T N+ L + C +G EA F++ G PD +Y L Y + L M
Sbjct: 372 TCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSM 431
Query: 457 EQNGIVPNKRFF 468
+ NGI N F
Sbjct: 432 KSNGIAANCHVF 443
>gi|222617300|gb|EEE53432.1| hypothetical protein OsJ_36514 [Oryza sativa Japonica Group]
Length = 607
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 145/314 (46%), Gaps = 4/314 (1%)
Query: 165 MWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYN 224
M + M+ +G RP YNA+I A L LGYF++M C P+ T+N
Sbjct: 1 MGVLESMKGAGLRPTTVSYNAVIDA---CGKGGVDLRFTLGYFRQMLKDGLC-PDRKTFN 56
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
LL AC++ +++ A+F E+ + DIYTYN +DA K G ++ VL M++
Sbjct: 57 SLLAACSRVGHLEDARAVFDEMIHLGIGRDIYTYNTFIDAICKCGNMELAMQVLLDMEAK 116
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
KP+++T++ LID Y K + +++ ++ + + + + +N+++ Y KA +
Sbjct: 117 GVKPNVVTYSTLIDGYSKLEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKAGKYAEI 176
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
V +M + +TY +I YG + + ++ K G V T + +++
Sbjct: 177 ANVCDEMEELGIEKDTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDI 236
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y G+ +A ++ + G+ PD + K + E LL M + GI PN
Sbjct: 237 YSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTEMGIKPN 296
Query: 465 KRFFLEALETFSSS 478
+ ++ F S
Sbjct: 297 VVTYNAIIDAFGKS 310
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 134/304 (44%), Gaps = 16/304 (5%)
Query: 148 YSKLIAVMGKKG-QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
Y+ +I GK G R + F +M G PD +N+L+ A + L A
Sbjct: 19 YNAVIDACGKGGVDLRFTLGYFRQMLKDGLCPDRKTFNSLLAAC----SRVGHLEDARAV 74
Query: 207 FQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
F +M G+ R +I TYN + A + N++ + ++ + P++ TY+ ++D
Sbjct: 75 FDEMIHLGIGR---DIYTYNTFIDAICKCGNMELAMQVLLDMEAKGVKPNVVTYSTLIDG 131
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
Y K +E + +MKS + + D + +N L+ Y K + ++ V + +
Sbjct: 132 YSKLEKYEEALKLCEKMKSMRIQLDRVCYNTLLAIYVKAGKYAEIANVCDEMEELGIEKD 191
Query: 325 LPTFNSMIINYGKARLQGKAEYV---FQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
T+NS+I YGK QG+ + V Q M PS +TY +I +Y A
Sbjct: 192 TVTYNSLINGYGK---QGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMHGDAFN 248
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
++ + + G V ++ ++ NGL A L + MG+ P+ TY + A+
Sbjct: 249 VYLDFKESGLKPDVVLFSSFIDTLAKNGLIEWALSLLNDMTEMGIKPNVVTYNAIIDAFG 308
Query: 442 KANM 445
K+ +
Sbjct: 309 KSKV 312
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 151/350 (43%), Gaps = 16/350 (4%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L FR M K D ++ L+A + G A +F EM + G D YN I
Sbjct: 37 LGYFRQMLKDG-LCPDRKTFNSLLAACSRVGHLEDARAVFDEMIHLGIGRDIYTYNTFID 95
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
A + A+ L + KG+ KPN+VTY+ L+ ++ ++ L +++
Sbjct: 96 AICKCGNMELAMQVLLD--MEAKGV---KPNVVTYSTLIDGYSKLEKYEEALKLCEKMKS 150
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
+ D YN ++ Y K G E+ +V M+ + D +T+N LI+ YGK+ D
Sbjct: 151 MRIQLDRVCYNTLLAIYVKAGKYAEIANVCDEMEELGIEKDTVTYNSLINGYGKQGRLDI 210
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+ + + + P++ T++++I Y KA + G A V+ P + + I
Sbjct: 211 VSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMHGDAFNVYLDFKESGLKPDVVLFSSFID 270
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
+ A + ++++++G V T NA+++A+ + + E D + +GV
Sbjct: 271 TLAKNGLIEWALSLLNDMTEMGIKPNVVTYNAIIDAFGKSKVMMEDDSEVGDMGIVGVYG 330
Query: 429 D-----SSTYKLLYKAYTKANMKE-----LVQKLLKRMEQNGIVPNKRFF 468
++ ++ T M+ + +L ++M Q G+ PN F
Sbjct: 331 GQIVRVANPVSRGGRSATDVRMRRSQELFFILELFQKMVQQGVRPNVVTF 380
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 118/271 (43%), Gaps = 18/271 (6%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT Y+ LI GK+G+ + L +MR G P Y+ LI + A
Sbjct: 191 DTVTYNSLINGYGKQGRLDIVSILVQDMRKRGVAPSVLTYSTLIDIYSKAGMHGDAFNVY 250
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L + K G+ KP++V ++ + A+ ++ +L ++ E + P++ TYN ++D
Sbjct: 251 LDF--KESGL---KPDVVLFSSFIDTLAKNGLIEWALSLLNDMTEMGIKPNVVTYNAIID 305
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK----------MEQVF 313
A+GK+ ++ E +S + M I S G R A D + ++F
Sbjct: 306 AFGKSKVMMEDDSEVGDMGIVGVYGGQIVRVANPVSRGGRSATDVRMRRSQELFFILELF 365
Query: 314 KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC 373
+ ++ +P + TF++++ + A + +++ + Y ++ G
Sbjct: 366 QKMVQQGVRPNVVTFSAILNACSRCNSFEDAALLLEQLRLFDNFVYGVAYGLLV---GSR 422
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
+ S+A+ +F++L ++ + NA+ +
Sbjct: 423 EVWSQAQSLFNQLGRMDSPTSSAFYNALTDV 453
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 153/375 (40%), Gaps = 16/375 (4%)
Query: 111 HCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSE 170
CF L E++ + K L + Q Y D Y+ +I+ + K+ A + +
Sbjct: 331 QCFFLKEKMEDAMKLLDDM-------IQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQK 383
Query: 171 MRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRAC 230
MR +GC P+ YNALI R +AL L + G+ PNI TY IL
Sbjct: 384 MRENGCEPNIYTYNALIQGLCAVRRPEEALE--LVTLMEQGGV---PPNIYTYTILTHGL 438
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
+ R +D+ +F E L P+ TYN +++ Y + + E +L M N C PD
Sbjct: 439 CKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDH 498
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL--QGKAEYVF 348
+T+ LI + ++ + + T N I+ G AR+ A +
Sbjct: 499 VTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLN--ILARGLARVGNHKDASIFY 556
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
++M + S Y I + A+ + E+ G ++T N M++ +C
Sbjct: 557 RRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQ 616
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G +AD + G+ PD+ +Y +L K + + +L + G+V N +
Sbjct: 617 GRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQLYATALERGVVLNPKPV 676
Query: 469 LEALETFSSSLAGSQ 483
++ + L SQ
Sbjct: 677 IQEPDELPEGLVRSQ 691
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 168/373 (45%), Gaps = 17/373 (4%)
Query: 111 HCFLLFEELGKSDKWLQCLEVFRWMQKQRWY--IADTGIYSKLIAVMGKKGQTRLAMWLF 168
H F++ G+S ++ + LE F M++ + + DT S L++++ K + +A LF
Sbjct: 255 HSFVM--SYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNK-KLDMAENLF 311
Query: 169 SEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLR 228
++M N+G + Y ++I ++K + K L + P++VTY I++
Sbjct: 312 AQMINNGVSCNNLTYTSMIQCFF-LKEKMEDAMKLLDDMIQ----NNYAPDVVTYTIVIS 366
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
A + + ++Q + +++ E+ P+IYTYN ++ +E +++ M+ P
Sbjct: 367 ALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPP 426
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
+I T+ +L K + D+ +++F + KP T+N+++ Y + +A +
Sbjct: 427 NIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDIL 486
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
++M TP +TY +I + + A + DE+ G D+ TLN +
Sbjct: 487 KEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARV 546
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G +A + + + G +S Y L + A E Q LL M G PN
Sbjct: 547 GNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPN---- 602
Query: 469 LEALETFSSSLAG 481
L T+++ + G
Sbjct: 603 ---LTTYNTMIKG 612
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 146/336 (43%), Gaps = 11/336 (3%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L F+W KQ Y +T Y +I ++G+ L +M+ G S+ ++ +
Sbjct: 200 LRFFQWADKQEGYDHNTDAYFTMIDILGRAKMFTELQSLLQKMQTQGREITRSMLHSFVM 259
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIV--TYNILLRACAQARNVDQVNALFKEL 246
++ ++ ++L F MK M +P ++ YN +L + + + +D LF ++
Sbjct: 260 SY----GRSGRFKESLEAFNLMKEMGY-EPGLIDTAYNSVLVSLVKNKKLDMAENLFAQM 314
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
+ ++ + TY ++ + +++ +L M N PD++T+ ++I + KR+
Sbjct: 315 INNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMI 374
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
++ V + + + +P + T+N++I R +A + M P+ TY
Sbjct: 375 EQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTY--T 432
Query: 367 ITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
I +G C + RA+E+F+E G T N +L YC EA + + H
Sbjct: 433 ILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQN 492
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
TPD TY L + + N ++ ME G
Sbjct: 493 DCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKG 528
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 74/171 (43%), Gaps = 2/171 (1%)
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
+ID G+ + F +++ + + + + T +S +++YG++ ++ F M M
Sbjct: 222 MIDILGRAKMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMG 281
Query: 356 YTPSFI--TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
Y P I Y ++ + A +F ++ G T +M++ + + +
Sbjct: 282 YEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMED 341
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A L ++ PD TY ++ A K M E +L++M +NG PN
Sbjct: 342 AMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPN 392
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 152/343 (44%), Gaps = 15/343 (4%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
+ ++ D Y LI + +G A+ LF+E + G +PD VYN+L+ K
Sbjct: 319 KGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLV--------KGL 370
Query: 199 AL-AKALGYFQKMKGM--ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
L L Q M M E C P+I TYNI++ + N+ + + PD+
Sbjct: 371 CLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDV 430
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
+T+N ++D Y K + ++ RM PD IT+N +++ K +++ + F+
Sbjct: 431 FTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQE 490
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
++ P T+N +I N+ ++ +A V KM+ P +++ +I YG+C N
Sbjct: 491 MILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLI--YGFCRN 548
Query: 376 --VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ A +F +L + G T N ++ A+ A+ +F+ + G DS TY
Sbjct: 549 GDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTY 608
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
++L K + L M + G +P+ F + + +
Sbjct: 609 RVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLT 651
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 154/364 (42%), Gaps = 35/364 (9%)
Query: 130 EVFRWMQKQRWY-IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
E R + R Y + D Y+ LI + KK + AM M N GC PD YN +I
Sbjct: 239 EAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIID 298
Query: 189 AH--LHTRDKAKALAK----------ALGYFQKMKGM------ERC------------KP 218
+ + +A L K + Y + G+ ER KP
Sbjct: 299 GYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKP 358
Query: 219 NIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
+IV YN L++ C Q + + + E+ E PDI TYN V++ K G I + V
Sbjct: 359 DIVVYNSLVKGLCLQGLILHALQVM-NEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 417
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
++ PD+ TFN LID Y KR D Q+ + + P T+NS++ K
Sbjct: 418 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 477
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
A + FQ+M P+ ITY +I + + + A ++ ++S+ G +
Sbjct: 478 AGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVS 537
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT-KANMKELVQKLLKRM 456
N ++ +C NG A LLF+ G + + T+ L A++ K NM + +K+ M
Sbjct: 538 FNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNM-HMAEKIFDEM 596
Query: 457 EQNG 460
G
Sbjct: 597 LSKG 600
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 148/341 (43%), Gaps = 18/341 (5%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
LE+F Q + D +Y+ L+ + +G A+ + +EM GC PD YN +I
Sbjct: 345 LELFNEAQA-KGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 403
Query: 189 AHL---HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
+ D + A+ MKG P++ T+N L+ + +D L +
Sbjct: 404 GLCKMGNISDATVVMNDAI-----MKGY---LPDVFTFNTLIDGYCKRLKLDSALQLVER 455
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ E +APD TYN V++ K G + E+ M C P+ IT+N+LI+++ +
Sbjct: 456 MWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNK 515
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR---LQGKAEYVFQKMTAMKYTPSFIT 362
++ +V + P +FN++I YG R L+G A +FQK+ Y+ + T
Sbjct: 516 MEEASKVIVKMSQEGLHPDAVSFNTLI--YGFCRNGDLEG-AYLLFQKLEEKGYSATADT 572
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
+ +I + N+ A +IFDE+ G T +++ C A +
Sbjct: 573 FNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMI 632
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
G P ST+ + + T + ++ M + G+VP
Sbjct: 633 KKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 673
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 127/320 (39%), Gaps = 13/320 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + G+ + R+ R P+ + L A + +A L A+ F
Sbjct: 17 YCALIRPLASAGRVDAVDAAVASARS---RLSPATIHPLYVASIRAYARAGRLRDAVDAF 73
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M + C P YN ++ A A DQ + ++ + + ++PD++T+ + ++
Sbjct: 74 ERMD-LFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSF-- 130
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ L +++ + + ++ Y D Q+F ++H+ P L
Sbjct: 131 -CLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDA-RQLFDQMLHTHVFPNLAA 188
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRAREIFDE 385
FN ++ K +A + K+ + + TY I + G C+ + A + D
Sbjct: 189 FNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYN--IWIRGLCEAGRLPEAVRLVDG 246
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ V T N ++ C +P EA N G PD TY + Y K +M
Sbjct: 247 MRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISM 305
Query: 446 KELVQKLLKRMEQNGIVPNK 465
+ +LLK G VP++
Sbjct: 306 VQEATELLKDAVFKGFVPDQ 325
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 132/368 (35%), Gaps = 84/368 (22%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y I + G+ R A+ F M C P YNA++ AL A +
Sbjct: 52 LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIM----------DALVDAAYH 101
Query: 207 FQKMKGMER-----CKPNIVTYNILLRA-CAQAR-------------------------- 234
Q K R P++ T+ I LR+ C AR
Sbjct: 102 DQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGL 161
Query: 235 ----NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE----MESVLSRMKS--- 283
+ LF ++ + + P++ +N V+ A K G + E + V+ R S
Sbjct: 162 YAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINL 221
Query: 284 --------NQCK-------------------PDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
C+ PD++T+N LI K+ + + +
Sbjct: 222 FTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRM 281
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--D 374
M+ P T+N++I Y K + +A + + + P +TY +I G C
Sbjct: 282 MNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLIN--GLCAEG 339
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
+V RA E+F+E G + N++++ C+ GL A + G PD TY
Sbjct: 340 DVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYN 399
Query: 435 LLYKAYTK 442
++ K
Sbjct: 400 IVINGLCK 407
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 167/386 (43%), Gaps = 41/386 (10%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L +L +S++ + + R M+K+ + + Y+ LI +G+ +A L +EM +
Sbjct: 268 MLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV-TYNTLINGFSNEGKVLIASQLLNEMLS 326
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G P+ +NALI H+ + +AL + Y + KG+ P+ V+Y +LL +
Sbjct: 327 FGLSPNHVTFNALIDGHISEGNFKEALK--MFYMMEAKGL---TPSEVSYGVLLDGLCKN 381
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
D + + + + TY G++D KNG + E +L+ M + PDI+T+
Sbjct: 382 AEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTY 441
Query: 294 NLLIDSYGKRQAFDKMEQ-----------------------------------VFKSLMH 318
+ LI+ + K F ++ ++++++
Sbjct: 442 SALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMIL 501
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
TFN ++ + KA +AE + MT+ P+ ++++C+I YG +
Sbjct: 502 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK 561
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A +FDE++K+G T ++L+ C G EA+ ++ H + D+ Y L
Sbjct: 562 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 621
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPN 464
A K+ L M Q I+P+
Sbjct: 622 AMCKSGNLAKAVSLFGEMVQRSILPD 647
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 164/399 (41%), Gaps = 18/399 (4%)
Query: 95 PLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAV 154
P V T N + V+ +E F KS +Q +E + Y Y+ ++
Sbjct: 191 PDVATFNILINVLCAEGSF------EKSSYLMQKME-------KSGYAPTIVTYNTVLHW 237
Query: 155 MGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME 214
KKG+ + A+ L M++ G D YN LI H ++ +AK + M+
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLI----HDLCRSNRIAKGYLLLRDMR-KR 292
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
PN VTYN L+ + V + L E+ L+P+ T+N ++D + G KE
Sbjct: 293 MIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEA 352
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
+ M++ P +++ +L+D K FD + + + T+ MI
Sbjct: 353 LKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDG 412
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
K +A + +M+ P +TY +I + A+EI + ++G
Sbjct: 413 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPN 472
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
+ ++ C G EA ++E G T D T+ +L + KA ++ ++
Sbjct: 473 GIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 532
Query: 455 RMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTR 493
M +GI+PN F + + +S G ++ S ++T+
Sbjct: 533 CMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 571
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 131/290 (45%), Gaps = 5/290 (1%)
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
C +PSVY+ LI +L + + +L F+ M G+ P++ T N +L + ++
Sbjct: 119 CNSNPSVYDILIRVYL----REGMIQDSLEIFRLM-GLYGFNPSVYTCNAILGSVVKSGE 173
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
V + KE+ + + PD+ T+N +++ G ++ ++ +M+ + P I+T+N
Sbjct: 174 DVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNT 233
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
++ Y K+ F ++ + + T+N +I + ++ K + + M
Sbjct: 234 VLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRM 293
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
P+ +TY +I + V A ++ +E+ G T NA+++ + G EA
Sbjct: 294 IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEAL 353
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+F G+TP +Y +L K +L + RM++NG+ +
Sbjct: 354 KMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 403
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 134/299 (44%), Gaps = 20/299 (6%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
DT +Y+ L+ M K G A+ LF EM PD Y +LI+ K K +
Sbjct: 611 VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR---KGKTVIA 667
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI-LAPDIYTYNGV 261
L + ++ + PN V Y + +A + F+E +++ PDI T N +
Sbjct: 668 IL-FAKEAEARGNVLPNKVMYTCFVDGMFKAGQW-KAGIYFREQMDNLGHTPDIVTTNAM 725
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+D Y + G I++ +L M + P++ T+N+L+ Y KR+ +++S++ +
Sbjct: 726 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 785
Query: 322 KPTLPTFNSMII-----NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN- 375
P T +S+++ N + L+ ++ + + +YT + + +C C N
Sbjct: 786 LPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKC-------CANG 838
Query: 376 -VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
++ A ++ ++ LG + T +AM+ N E+ ++ G++P+S Y
Sbjct: 839 EINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 897
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 153/394 (38%), Gaps = 46/394 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L L K+ K + E R M + +T + LI G G+ A +F EM
Sbjct: 513 VLVTSLCKAGKVAEAEEFMRCMTSD-GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 571
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G P Y +L+ K L +A + + + + + V YN LL A ++
Sbjct: 572 VGHHPTFFTYGSLLKGLC----KGGHLREAEKFLKSLHAVPA-AVDTVMYNTLLTAMCKS 626
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG-------MIKEMES---------- 276
N+ + +LF E+ + + PD YTY ++ + G KE E+
Sbjct: 627 GNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVM 686
Query: 277 ----VLSRMKSNQCK---------------PDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
V K+ Q K PDI+T N +ID Y + +K + +
Sbjct: 687 YTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMG 746
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN-- 375
+ P L T+N ++ Y K + + +++ + P +T C + G C++
Sbjct: 747 NQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT--CHSLVLGICESNM 804
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+ +I G ++ T N ++ C NG A L + ++G++ D T
Sbjct: 805 LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 864
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFL 469
+ + + + + +L M + GI P R ++
Sbjct: 865 MVSVLNRNHRFQESRMVLHEMSKQGISPESRKYI 898
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 131/332 (39%), Gaps = 18/332 (5%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++ L+ + K G+ A M + G P+ ++ LI + ++ + KA +
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS-- 564
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F +M + P TY LL+ + ++ + K LH A D YN ++
Sbjct: 565 --VFDEMTKVGH-HPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 621
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK- 322
A K+G + + S+ M PD T+ LI ++ + +++ +KE
Sbjct: 622 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG------KTVIAILFAKEAE 675
Query: 323 ------PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
P + + KA Y ++M + +TP +T +I Y +
Sbjct: 676 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+ ++ E+ ++T N +L Y + + LL+ + G+ PD T L
Sbjct: 736 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
++NM E+ K+LK G+ ++ F
Sbjct: 796 VLGICESNMLEIGLKILKAFICRGVEVDRYTF 827
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 109/320 (34%), Gaps = 83/320 (25%)
Query: 171 MRNSGCRPDPSVYNALITAHLHTR----DKAKALAKALG---------YFQKMKGMERCK 217
++ G D V IT H+ R D A+ + K L + M C
Sbjct: 61 VKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCN 120
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
N Y+IL+R + + +F+ + P +YT N ++ + K+G + S
Sbjct: 121 SNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 180
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L M + PD+ TFN+LI+ +F+
Sbjct: 181 LKEMLKRKICPDVATFNILINVLCAEGSFE------------------------------ 210
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
K+ Y+ QKM Y P+ +TY
Sbjct: 211 -----KSSYLMQKMEKSGYAPTIVTY---------------------------------- 231
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
N +L YC G A L ++ + GV D TY +L ++N LL+ M
Sbjct: 232 -NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR 290
Query: 458 QNGIVPNKRFFLEALETFSS 477
+ I PN+ + + FS+
Sbjct: 291 KRMIHPNEVTYNTLINGFSN 310
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 138/354 (38%), Gaps = 42/354 (11%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ + M K GQ + ++ +M N G PD NA+I + + + K
Sbjct: 686 MYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGY----SRMGKIEKTNDL 741
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+M G + PN+ TYNILL ++ ++V L++ + + + PD T + ++
Sbjct: 742 LPEM-GNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGIC 800
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ----AFDKMEQVFKSLMHSKEK 322
++ M++ +L + D TFN+LI AFD + +V SL S +K
Sbjct: 801 ESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFD-LVKVMTSLGISLDK 859
Query: 323 PTLPTFNSMI---INYGKARL-------QG----------------------KAEYVFQK 350
T S++ + ++R+ QG A V ++
Sbjct: 860 DTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEE 919
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M A K P + ++ C A + + K+ +++ ++ C NG
Sbjct: 920 MIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGN 979
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA L N G+ D +Y +L L +L + M+ +G + N
Sbjct: 980 VIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLAN 1033
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 87/218 (39%)
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
T+N+L+ C ++ L K + ++ D T + ++ +N +E VL M
Sbjct: 826 TFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEM 885
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
P+ + LI+ + V + ++ K P ++M+ K
Sbjct: 886 SKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKA 945
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
+A + + M MK P+ ++ ++ + NV A E+ +S G + + + N +
Sbjct: 946 DEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVL 1005
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+ C G A L+E G +++TYK L +
Sbjct: 1006 ITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043
>gi|224136033|ref|XP_002327364.1| predicted protein [Populus trichocarpa]
gi|222835734|gb|EEE74169.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 166/399 (41%), Gaps = 49/399 (12%)
Query: 100 LNKYVKVVRSEHCFLLFEEL-------------------GKSDKWLQCLEVFRWMQKQRW 140
L+ VK +H + +FE++ GK K + LE+F M +
Sbjct: 253 LDALVKDSEVDHAYKVFEDMKRKHCEPDEYTYTIMIRMTGKIGKPDESLELFEEML-NKG 311
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI-----TAHLHTRD 195
Y + Y+ +I + A+ LF +M CRP Y+ ++ LH D
Sbjct: 312 YSPNVIAYNTMIQALANARMVDKAILLFLKMVEKECRPSEFTYSVILHLLATERKLHKLD 371
Query: 196 KAKALAKA----------------LGY-------FQKMKGMERCKPNIVTYNILLRACAQ 232
+ ++K LG+ F M ++L C+
Sbjct: 372 EVVEVSKKYMSRSIYAYLVRTLKKLGHASEAHRLFCNMWNCHERGDRDACVSMLECLCSA 431
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+ + ++ L K +HE ++ D YN V A GK I + + +MK + PD T
Sbjct: 432 GKTTEAIDLLGK-IHEKGVSVDTVMYNTVFSALGKLKQISPLHDLYEKMKQDGPLPDTFT 490
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N+LI S+G+ D+ ++F+ L S KP ++NS+I GK +A F++M
Sbjct: 491 YNILISSFGRAGKVDEAIKIFEELEDSDYKPDTCSYNSLINCLGKNGHLDEAHMKFKEMC 550
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
P +TY +I +G D V A +FDE+ G + T N +L+ +G
Sbjct: 551 EKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCYPNIVTYNILLDCLERSGRTA 610
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
EA L+ G+ PDS TY +L + + ++ K V+K
Sbjct: 611 EAVDLYAKLKQQGLIPDSITYSVLARLQSGSHRKVRVRK 649
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 154/356 (43%), Gaps = 43/356 (12%)
Query: 144 DTGIYSKLIAVMGKKG---QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
D YS++I ++ K + LA + SEM +G R S N LI + ++ D K +
Sbjct: 140 DCFTYSRIILILSKSNLPDRFHLARSIVSEMERNGVRGSISTVNILIGFYENSEDLQKCI 199
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+ +M G TY L++A ++RN ++ A++ E+ + DI+ +N
Sbjct: 200 GLIKKWGLRMTGY--------TYKCLVQAYLRSRNTEKGFAVYLEMKKKGHMLDIFAFNM 251
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++DA K+ + V MK C+PD T+ ++I GK D+ ++F+ +++
Sbjct: 252 LLDALVKDSEVDHAYKVFEDMKRKHCEPDEYTYTIMIRMTGKIGKPDESLELFEEMLNKG 311
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P + +N+MI AR+ KA +F KM + PS TY I+ + + +
Sbjct: 312 YSPNVIAYNTMIQALANARMVDKAILLFLKMVEKECRPSEFTYSVILHLLATERKLHKLD 371
Query: 381 EIFD----------------ELSKLGKDMKVSTL----------------NAMLEAYCMN 408
E+ + L KLG + L +MLE C
Sbjct: 372 EVVEVSKKYMSRSIYAYLVRTLKKLGHASEAHRLFCNMWNCHERGDRDACVSMLECLCSA 431
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G TEA L H GV+ D+ Y ++ A K + L ++M+Q+G +P+
Sbjct: 432 GKTTEAIDLLGKIHEKGVSVDTVMYNTVFSALGKLKQISPLHDLYEKMKQDGPLPD 487
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 170/408 (41%), Gaps = 48/408 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K + +VF M+++ D Y+ +I + GK G+ ++ LF EM N
Sbjct: 251 MLLDALVKDSEVDHAYKVFEDMKRKHCE-PDEYTYTIMIRMTGKIGKPDESLELFEEMLN 309
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G P+ YN +I A + A+ + KA+ F KM E C+P+ TY+++L A
Sbjct: 310 KGYSPNVIAYNTMIQALAN----ARMVDKAILLFLKMVEKE-CRPSEFTYSVILHLLATE 364
Query: 234 RNVDQVNALFKELHESILAPDIYTY---------------------------------NG 260
R + +++ + E+ + ++ IY Y
Sbjct: 365 RKLHKLDEVV-EVSKKYMSRSIYAYLVRTLKKLGHASEAHRLFCNMWNCHERGDRDACVS 423
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
+++ G E +L ++ D + +N + + GK + + +++ +
Sbjct: 424 MLECLCSAGKTTEAIDLLGKIHEKGVSVDTVMYNTVFSALGKLKQISPLHDLYEKMKQDG 483
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P T+N +I ++G+A +A +F+++ Y P +Y +I G ++ A
Sbjct: 484 PLPDTFTYNILISSFGRAGKVDEAIKIFEELEDSDYKPDTCSYNSLINCLGKNGHLDEAH 543
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
F E+ + G + V T + ++E + A LF+ G P+ TY +L
Sbjct: 544 MKFKEMCEKGLNPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCYPNIVTYNILLDCL 603
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAK 488
++ L +++Q G++P+ + S LA QSGS +
Sbjct: 604 ERSGRTAEAVDLYAKLKQQGLIPDSITY--------SVLARLQSGSHR 643
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 87/215 (40%), Gaps = 6/215 (2%)
Query: 254 DIYTYNGVMDAYGKNGMIKEME---SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
D +TY+ ++ K+ + S++S M+ N + I T N+LI Y + K
Sbjct: 140 DCFTYSRIILILSKSNLPDRFHLARSIVSEMERNGVRGSISTVNILIGFYENSEDLQKCI 199
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+ K + T T+ ++ Y ++R K V+ +M + + ++
Sbjct: 200 GLIKKW---GLRMTGYTYKCLVQAYLRSRNTEKGFAVYLEMKKKGHMLDIFAFNMLLDAL 256
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
V A ++F+++ + + T M+ G P E+ LFE N G +P+
Sbjct: 257 VKDSEVDHAYKVFEDMKRKHCEPDEYTYTIMIRMTGKIGKPDESLELFEEMLNKGYSPNV 316
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
Y + +A A M + L +M + P++
Sbjct: 317 IAYNTMIQALANARMVDKAILLFLKMVEKECRPSE 351
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 144/326 (44%), Gaps = 8/326 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI ++ A +F EM GCR + Y LI H + + +A
Sbjct: 252 DFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLI----HGLCVERRIDEA 307
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
+ F KMK + C P + TY +L++A C R + +N L KE+ E + P+I+TY ++
Sbjct: 308 MDLFVKMKD-DDCYPTVRTYTVLIKALCGSERKSEALN-LVKEMEEKGIKPNIHTYTVLI 365
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D+ +++ +L +M P++IT+N LI+ Y KR + V + + +
Sbjct: 366 DSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLR 425
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P T+N +I Y K + KA V KM K P +TY +I N A +
Sbjct: 426 PNTRTYNELIKGYCKRNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
++ G T +M+++ C + EA LF++ V P+ Y L Y K
Sbjct: 485 LSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCK 544
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFF 468
A +L++M +PN F
Sbjct: 545 AGKVNEAHLMLEKMLSKNCLPNSLTF 570
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 169/370 (45%), Gaps = 18/370 (4%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L S++ + L + + M+ ++ + Y+ LI + + + A L +M
Sbjct: 328 VLIKALCGSERKSEALNLVKEME-EKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLE 386
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G P+ YNALI + K + AL + M+ +PN TYN L++ +
Sbjct: 387 KGLMPNVITYNALINGYC----KRGMIEDALDVVELMES-RNLRPNTRTYNELIKGYCK- 440
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
RNV + + ++ E + PD+ TYN ++D ++G +LS M PD T+
Sbjct: 441 RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTY 500
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+IDS K + ++ +F SL P + + ++I Y KA +A + +KM +
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLS 560
Query: 354 MKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P+ +T+ +I +G C + + A + +++ K+ VST ++ +G
Sbjct: 561 KNCLPNSLTFNALI--HGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDF 618
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
A F+ + G PD+ TY + Y + + + ++ +M++NG+ P+
Sbjct: 619 DHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPD------- 671
Query: 472 LETFSSSLAG 481
L T+SS + G
Sbjct: 672 LFTYSSLIKG 681
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 144/343 (41%), Gaps = 12/343 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI K+G A+ + M + RP+ YN LI + + + KA+G
Sbjct: 396 YNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYC-----KRNVHKAMGVL 450
Query: 208 QKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
KM +ER P++VTYN L+ ++ N D L +++ L PD +TY ++D+
Sbjct: 451 NKM--LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLC 508
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K+ ++E + ++ P+++ + LID Y K ++ + + ++ P
Sbjct: 509 KSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSL 568
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
TFN++I +A + +KM + P+ T +I + A F ++
Sbjct: 569 TFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQM 628
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
G T ++ YC G +A+ + GV+PD TY L K Y
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRT 688
Query: 447 ELVQKLLKRMEQNGIVPNKRFFL----EALETFSSSLAGSQSG 485
+LKRM G P++ FL LE + G + G
Sbjct: 689 NSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPG 731
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 147/351 (41%), Gaps = 26/351 (7%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+R + D Y+ LI + G A L S M + G PDP Y ++I + K+
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLC----KS 510
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
K + +A F ++ + PN+V Y L+ +A V++ + + +++ P+ T
Sbjct: 511 KRVEEACDLFDSLE-QKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLT 569
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
+N ++ +G +KE + +M +P + T +LI K FD + F+ ++
Sbjct: 570 FNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQML 629
Query: 318 HSKEKPTLPTFNSMIINYGK-ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
S KP T+ + I Y + RLQ AE + KM +P TY +I YG
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLQ-DAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRT 688
Query: 377 SRAREIFDELSKLG---------------KDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
+ A + + G +MK + C+ E D++ E
Sbjct: 689 NSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELL 748
Query: 422 HNM---GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ-NGIVPNKRFF 468
M GVTP++ +Y+ L + + +K+ M+Q GI P++ F
Sbjct: 749 EKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVF 799
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 166/402 (41%), Gaps = 64/402 (15%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ + L KS + + ++F ++ Q+ I + +Y+ LI K G+ A + +M +
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLE-QKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSK 561
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
C P+ +NALI H L +A +KM ++ +P + T IL+ +
Sbjct: 562 NCLPNSLTFNALI----HGLCTDGKLKEATLLEEKMVKIDL-QPTVSTDTILIHRLLKDG 616
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ D F+++ S PD +TY + Y + G +++ E ++++MK N PD+ T++
Sbjct: 617 DFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYS 676
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI-----INYGKAR--------LQ 341
LI YG + V K + + +P+ TF S+I + YGK + +
Sbjct: 677 SLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMS 736
Query: 342 GKAEY-----VFQKMTAMKYTPSFITYECIITMYGYCD--NVSRAREIFDELS-KLGKDM 393
E+ + +KM TP+ +YE + M G C+ N+ A ++FD + K G
Sbjct: 737 NMMEFDIVVELLEKMVEHGVTPNAKSYEKL--MLGICEIGNLRVAEKVFDHMQQKEGISP 794
Query: 394 KVSTLNAML-----------------EAYCMNGLPT------------------EADLLF 418
NA+L + C+ LP +F
Sbjct: 795 SELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVF 854
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+N G D +K++ K + E +L ME+NG
Sbjct: 855 QNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNG 896
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 113/256 (44%)
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
I YN LL + A+ VD++ ++ E+ E + P+IYTYN +++ Y K G ++E +S
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVS 242
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR 339
+ PD T+ LI Y +R+ D +VFK + + + +I R
Sbjct: 243 MIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVER 302
Query: 340 LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLN 399
+A +F KM P+ TY +I + S A + E+ + G + T
Sbjct: 303 RIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYT 362
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
++++ C +A L G+ P+ TY L Y K M E +++ ME
Sbjct: 363 VLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESR 422
Query: 460 GIVPNKRFFLEALETF 475
+ PN R + E ++ +
Sbjct: 423 NLRPNTRTYNELIKGY 438
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 4/190 (2%)
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
I +N L++S + D+M+QV+ ++ K P + T+N M+ Y K +A
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVS 242
Query: 350 KMTAMKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
+ P F TY +I GYC ++ A ++F E+ G ++ C+
Sbjct: 243 MIVEAGLDPDFFTYTSLIM--GYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCV 300
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
EA LF + P TY +L KA + K L+K ME+ GI PN
Sbjct: 301 ERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHT 360
Query: 468 FLEALETFSS 477
+ +++ S
Sbjct: 361 YTVLIDSLCS 370
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 105/269 (39%), Gaps = 23/269 (8%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ D YS LI G G+T A + M ++GC P + +LI L +
Sbjct: 664 KENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMK-- 721
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+ K+KG E P + + ++ D V L +++ E + P+
Sbjct: 722 ----------YGKVKGGE---PGVCVMSNMME-------FDIVVELLEKMVEHGVTPNAK 761
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQ-CKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
+Y +M + G ++ E V M+ + P + FN L+ K + ++ +V
Sbjct: 762 SYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDD 821
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
++ P L + +I K + + VFQ + Y + ++ II G
Sbjct: 822 MICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGL 881
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEA 404
V E+F+ + K G T + ++E
Sbjct: 882 VEAFYELFNVMEKNGCTFSSQTYSLLIEG 910
>gi|410110097|gb|AFV61128.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
rugosa]
Length = 348
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 5/255 (1%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ +FS ++ SG PD YNA+I KAK +A +MK PN +Y
Sbjct: 6 AISIFSRLKRSGFTPDLVAYNAMINVF----GKAKLFREARSLIGEMKA-AGVMPNTXSY 60
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
+ LL + + + ++F E+ E D+ T N ++D YG+ GM KE + + M+
Sbjct: 61 STLLTMYVENKKFLEALSVFXEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 120
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+P+++++N L+ YG + F + +F+ + + + T+NSM++ YGK K
Sbjct: 121 MGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEK 180
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A + Q+M + P+ ITY II+++G + RA +F +L G ++ M+
Sbjct: 181 ANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIV 240
Query: 404 AYCMNGLPTEADLLF 418
AY GL A L
Sbjct: 241 AYERAGLVAHAKRLL 255
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 129/263 (49%), Gaps = 1/263 (0%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+KA+ F ++K P++V YN ++ +A+ + +L E+ + + P+ +Y+
Sbjct: 4 SKAISIFSRLK-RSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYST 62
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ Y +N E SV M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 63 LLTMYVENKKFLEALSVFXEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 122
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P + ++N+++ YG A L G+A ++F+ M + +TY ++ +YG +A
Sbjct: 123 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 182
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ E+ G + T + ++ + G A +LF+ + GV D ++ + AY
Sbjct: 183 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY 242
Query: 441 TKANMKELVQKLLKRMEQNGIVP 463
+A + ++LL +++ +P
Sbjct: 243 ERAGLVAHAKRLLHELKRPDNIP 265
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 139/340 (40%), Gaps = 42/340 (12%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L EM+ +G P+ Y+ L+T ++
Sbjct: 14 KRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLLTMYVEN--- 70
Query: 197 AKALAKALGYFQKMK--------------------------------GMER--CKPNIVT 222
K +AL F +M+ GM + +PN+V+
Sbjct: 71 -KKFLEALSVFXEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 129
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
YN LLR A + LF+ + + ++ TYN +M YGK ++ +++ M+
Sbjct: 130 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQ 189
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
S +P+ IT++ +I +GK D+ +F+ L S + F +MI+ Y +A L
Sbjct: 190 SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVA 249
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
A+ + ++ P I + I + + A +F + G+ ++ M+
Sbjct: 250 HAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMI 305
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+ +F+ +G PDS ++ AY K
Sbjct: 306 HLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGK 345
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 132/286 (46%), Gaps = 12/286 (4%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
++ K+L+ L VF M++ + + D + +I V G+ G + A LF MR G P+
Sbjct: 69 ENKKFLEALSVFXEMREIKCLL-DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 127
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
YN L L A+ +A+ F+ M+ + + N+VTYN ++ + ++ N
Sbjct: 128 VSYNTL----LRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVTYNSMMMIYGKTLEHEKAN 182
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
L +E+ + P+ TY+ ++ +GK G + + +++S+ + D I F +I +Y
Sbjct: 183 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY 242
Query: 301 GKRQAFDKMEQVFKSLMHSKEKP-TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
+ K L+H ++P +P ++ I G R++ +A YVF++
Sbjct: 243 ERAGLVAHA----KRLLHELKRPDNIPRDTAIHILAGAGRIE-EATYVFRQAIDAGEVKD 297
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+E +I + S E+FD++ LG + +L AY
Sbjct: 298 ITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAY 343
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 76/159 (47%)
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+ K +F L S P L +N+MI +GKA+L +A + +M A P+ +Y
Sbjct: 3 YSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYST 62
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
++TMY A +F E+ ++ + ++T N M++ Y G+ EAD LF MG
Sbjct: 63 LLTMYVENKKFLEALSVFXEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 122
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ P+ +Y L + Y A + L + M++ I N
Sbjct: 123 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 161
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 86/189 (45%)
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
S+ SR+K + PD++ +N +I+ +GK + F + + + + P ++++++ Y
Sbjct: 8 SIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLLTMY 67
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
+ + +A VF +M +K T +I +YG A ++F + K+G + V
Sbjct: 68 VENKKFLEALSVFXEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 127
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+ N +L Y L EA LF + + TY + Y K E L++
Sbjct: 128 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 187
Query: 456 MEQNGIVPN 464
M+ GI PN
Sbjct: 188 MQSRGIEPN 196
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS +I++ GK G+ A LF ++R+SG D ++ +I A+ ++A +A A
Sbjct: 200 YSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY----ERAGLVAHAKRLL 255
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++K +P+ + + + A A +++ +F++ ++ DI + ++ K
Sbjct: 256 HELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSK 310
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
+ V +M+ PD +++++YGK Q
Sbjct: 311 YKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQ 347
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 147/323 (45%), Gaps = 11/323 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRD--KAKALA 201
+T Y+ L+ + + G+ R A L M GC PD Y +I + H + K L
Sbjct: 109 NTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLV 168
Query: 202 KALGYFQKMKGMERCKPNIVTY-NILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
K + ++KG+ KPN+ TY +I+L C + V+ L +E+ + + PD Y
Sbjct: 169 KEM----QLKGL---KPNLYTYSSIILLLCKSGKVVEGEKVL-REMMKRGVFPDHVIYTT 220
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++D + K G + + S M++ + PD I F+ LI + +++F ++
Sbjct: 221 LIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKG 280
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P T+ ++I Y K KA ++ +M + TP+ +TY + + A
Sbjct: 281 FEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTAN 340
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
E+ E+ + G + +ST N ++ C G +A L E G+ PD+ TY L AY
Sbjct: 341 ELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAY 400
Query: 441 TKANMKELVQKLLKRMEQNGIVP 463
K ++LL+ M G+ P
Sbjct: 401 YKTGEMVKARELLREMLDRGLQP 423
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 140/317 (44%), Gaps = 5/317 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS +I ++ K G+ + EM G PD +Y LI K A F
Sbjct: 183 YSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFC----KLGNTQAAYKLF 238
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M+ E P+ + ++ L+ + + V + + LF E+ + PD TY ++D Y K
Sbjct: 239 SEMEARE-IVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCK 297
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G +K+ + ++M P+++T+ L D K D ++ + + + T
Sbjct: 298 LGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNIST 357
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N+++ KA +A + ++M P ITY ++ Y + +ARE+ E+
Sbjct: 358 YNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREML 417
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G V T N ++ CM+G + + L + G+ P+++TY + K Y N
Sbjct: 418 DRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMR 477
Query: 448 LVQKLLKRMEQNGIVPN 464
+ ++ + M G+VP+
Sbjct: 478 ISTEIYRGMCAQGVVPD 494
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 164/394 (41%), Gaps = 24/394 (6%)
Query: 77 LESKELVRVLMRS--FSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRW 134
+E ++++R +M+ F D ++ + K+ ++ + LF E+
Sbjct: 197 VEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEM--------------- 241
Query: 135 MQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR 194
+ R + D+ +S LI + G+ A LF+EM G PD Y ALI +
Sbjct: 242 --EAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLG 299
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
+ KA + PN+VTY L ++ +D N L E+ L +
Sbjct: 300 EMKKAF-----FLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLN 354
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
I TYN +++ K G I + ++ MK PD IT+ L+D+Y K K ++ +
Sbjct: 355 ISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLR 414
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
++ +PT+ TFN ++ + E + + M P+ TY I+ Y +
Sbjct: 415 EMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRN 474
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
N+ + EI+ + G +T N +++ +C EA L + +S+Y
Sbjct: 475 NMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYN 534
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
L K + K ++L + M + G+V + +
Sbjct: 535 ALIKGFFKRKKLLEARQLFEEMRREGLVASAEIY 568
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 108/240 (45%), Gaps = 9/240 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ ++ + K G A+ L EM+ +G PD Y L+ A+ T + + KA
Sbjct: 358 YNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGE----MVKARELL 413
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
++M +G++ P +VT+N+L+ + ++ L K + E + P+ TYN +M Y
Sbjct: 414 REMLDRGLQ---PTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQY 470
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
++ + M + PD T+N+LI + K + + + K ++ + T
Sbjct: 471 CIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTA 530
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
++N++I + K + +A +F++M S Y + M N+ E+ DE
Sbjct: 531 SSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDE 590
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 142/344 (41%), Gaps = 40/344 (11%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ D Y+ LI K G + A+WLF +++ +G P YN L+ + D L
Sbjct: 369 LPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGD----LE 424
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY----- 256
+A + Q+M + C+P++ TY IL+ + RN+ V F E+ L PD +
Sbjct: 425 EARRFKQEMV-EQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTR 483
Query: 257 ------------------------------TYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
TYN +D K+G +K+ + +M S+
Sbjct: 484 ISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGL 543
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
+PD IT+ LI ++ +R + +F ++ S P+ T+ I Y + A
Sbjct: 544 QPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYG 603
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
FQKM P+ +TY +I + A + F E+ + G T +++ C
Sbjct: 604 WFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNC 663
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
G EA L+ H G+ PD T+ L+K + + K +Q
Sbjct: 664 KEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGFDEGQSKHAIQ 707
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 155/381 (40%), Gaps = 45/381 (11%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
G+ +K Q ++ R +K A ++ LI +G A L EM N G P
Sbjct: 282 GELEKAAQLVDRMRMSKK-----ASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPT 336
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQV 239
YN +I + + A K F +M+ M P+++TYN L+ +A N+ +
Sbjct: 337 VVTYNTIIHGMFRSGNVEAARMK----FVEMRAMG-LLPDLITYNSLINGYCKAGNLKEA 391
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
LF +L + LAP + TYN ++D Y + G ++E M C+PD+ T+ +L++
Sbjct: 392 LWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNG 451
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI-------------------INYGKAR- 339
K + + + F ++ +P +N+ I I+ G +
Sbjct: 452 SRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSD 511
Query: 340 -------LQG-------KAEYV-FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
L G K YV + KM + P ITY C+I + + AR+IFD
Sbjct: 512 TVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFD 571
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ G T + AYC G A F+ GV P+ TY +L A +
Sbjct: 572 GMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMG 631
Query: 445 MKELVQKLLKRMEQNGIVPNK 465
L + M + G+ PNK
Sbjct: 632 RTNLAYQHFHEMLERGLSPNK 652
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 115/249 (46%), Gaps = 3/249 (1%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P I N++LRA D + +++ E+ + + P I TYN ++D++ + G + + +
Sbjct: 194 PFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKL 253
Query: 278 LSRMKS--NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
L M++ C P +T+N++I+ ++ +K Q+ + SK+ TFN +I Y
Sbjct: 254 LREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASAF-TFNPLITGY 312
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
KA + +M P+ +TY II NV AR F E+ +G +
Sbjct: 313 FARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDL 372
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
T N+++ YC G EA LF + G+ P TY +L Y + E ++ +
Sbjct: 373 ITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQE 432
Query: 456 MEQNGIVPN 464
M + G P+
Sbjct: 433 MVEQGCQPD 441
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 136/317 (42%), Gaps = 6/317 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I + +KG+ A L MR S + +N LIT + A+ + G
Sbjct: 271 YNVVINGLARKGELEKAAQLVDRMRMSK-KASAFTFNPLITGYF-----ARGSVEKAGAL 324
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
Q E P +VTYN ++ ++ NV+ F E+ L PD+ TYN +++ Y K
Sbjct: 325 QLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCK 384
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G +KE + +K P ++T+N+L+D Y + ++ + + ++ +P + T
Sbjct: 385 AGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVST 444
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ ++ K R F +M + P Y I+ + S A ++ + +
Sbjct: 445 YTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMI 504
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G T N L+ C +G +A +L+ + G+ PD TY L A+ +
Sbjct: 505 SRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLR 564
Query: 448 LVQKLLKRMEQNGIVPN 464
+ + M +G+ P+
Sbjct: 565 EARDIFDGMLVSGLPPS 581
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 77/172 (44%), Gaps = 8/172 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI ++G+ R A +F M SG P Y I H + L A
Sbjct: 546 DCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFI----HAYCRRGNLYSA 601
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
G+FQKM E +PN VTYN+L+ A + + F E+ E L+P+ YTY ++D
Sbjct: 602 YGWFQKML-EEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLID 660
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ---AFDKMEQV 312
K G +E + S M + PD T N L + + Q A ME V
Sbjct: 661 GNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGFDEGQSKHAIQYMENV 712
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 98/233 (42%), Gaps = 13/233 (5%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
LG + + Q EV R +DT Y+ + + K G + A L+ +M + G +P
Sbjct: 490 LGSTSEAFQLTEVM----ISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQP 545
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
D Y LI AH + L +A F M + P+ VTY + + A + N+
Sbjct: 546 DCITYTCLIHAHC----ERGRLREARDIFDGML-VSGLPPSAVTYTVFIHAYCRRGNLYS 600
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
F+++ E + P+ TYN ++ A + G M P+ T+ LLID
Sbjct: 601 AYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLID 660
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
K +++ +++ + P T N++ + +G++++ Q M
Sbjct: 661 GNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGFD----EGQSKHAIQYM 709
>gi|410110063|gb|AFV61111.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
barbata]
Length = 364
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 5/255 (1%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ +FS ++ SG PD YNA+I KAK +A +MK PN +Y
Sbjct: 6 AISIFSRLKRSGFTPDLVAYNAMINVF----GKAKLFREARSLISEMK-XAGVMPNTTSY 60
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
+ LL + + + ++F E+ E D+ T N ++D YG+ GM KE + + M+
Sbjct: 61 STLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 120
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+P+++++N L+ YG + F + +F+ + + + T+NSM++ YGK K
Sbjct: 121 MGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEK 180
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A + Q+M + P+ ITY II+++G + RA +F +L G ++ M+
Sbjct: 181 ANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIV 240
Query: 404 AYCMNGLPTEADLLF 418
AY GL A L
Sbjct: 241 AYERAGLVAHAKRLL 255
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 130/263 (49%), Gaps = 1/263 (0%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+KA+ F ++K P++V YN ++ +A+ + +L E+ + + P+ +Y+
Sbjct: 4 SKAISIFSRLK-RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXAGVMPNTTSYST 62
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ Y +N E SV S M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 63 LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 122
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P + ++N+++ YG A L G+A ++F+ M + +TY ++ +YG +A
Sbjct: 123 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 182
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ E+ G + T + ++ + G A +LF+ + GV D ++ + AY
Sbjct: 183 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY 242
Query: 441 TKANMKELVQKLLKRMEQNGIVP 463
+A + ++LL +++ +P
Sbjct: 243 ERAGLVAHAKRLLHELKRPDNIP 265
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 151/343 (44%), Gaps = 15/343 (4%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L SEM+ +G P+ + Y+ L+T ++
Sbjct: 14 KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXAGVMPNTTSYSTLLTMYVEN--- 70
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
K +AL F +M+ + +C ++ T NI++ Q + + LF + + + P++
Sbjct: 71 -KKFLEALSVFSEMREI-KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVV 128
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+YN ++ YG + E + M+ + +++T+N ++ YGK +K + + +
Sbjct: 129 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEM 188
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P T++++I +GK +A +FQK+ + I ++ +I Y V
Sbjct: 189 QSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLV 248
Query: 377 SRAREIFDELSK---LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ A+ + EL + + +D + L G EA +F + + G D + +
Sbjct: 249 AHAKRLLHELKRPDNIPRDTAIHILAGA-------GRIEEATYVFRQAIDAGEVKDITVF 301
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+ + +K V ++ +M G P+ L +
Sbjct: 302 ERMIHLLSKYKKYSNVXEVFDKMRGLGYFPDSNVIAVVLNAYG 344
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 129/301 (42%), Gaps = 37/301 (12%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
++ K+L+ L VF M++ + + D + +I V G+ G + A LF MR G P+
Sbjct: 69 ENKKFLEALSVFSEMREIKCLL-DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 127
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
YN L L A+ +A+ F+ M+ + + N+VTYN ++ + ++ N
Sbjct: 128 VSYNTL----LRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVTYNSMMMIYGKTLEHEKAN 182
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
L +E+ + P+ TY+ ++ +GK G + + +++S+ + D I F +I +Y
Sbjct: 183 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY 242
Query: 301 --------GKRQAFD--------------------KMEQ---VFKSLMHSKEKPTLPTFN 329
KR + ++E+ VF+ + + E + F
Sbjct: 243 ERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFE 302
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
MI K + VF KM + Y P ++ YG +A +++ E+ ++
Sbjct: 303 RMIHLLSKYKKYSNVXEVFDKMRGLGYFPDSNVIAVVLNAYGKLXEFDKANDVYMEMQEV 362
Query: 390 G 390
G
Sbjct: 363 G 363
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%)
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+ K +F L S P L +N+MI +GKA+L +A + +M P+ +Y
Sbjct: 3 YSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXAGVMPNTTSYST 62
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
++TMY A +F E+ ++ + ++T N M++ Y G+ EAD LF MG
Sbjct: 63 LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 122
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ P+ +Y L + Y A + L + M++ I N
Sbjct: 123 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 161
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 86/189 (45%)
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
S+ SR+K + PD++ +N +I+ +GK + F + + + + P ++++++ Y
Sbjct: 8 SIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXAGVMPNTTSYSTLLTMY 67
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
+ + +A VF +M +K T +I +YG A ++F + K+G + V
Sbjct: 68 VENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 127
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+ N +L Y L EA LF + + TY + Y K E L++
Sbjct: 128 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 187
Query: 456 MEQNGIVPN 464
M+ GI PN
Sbjct: 188 MQSRGIEPN 196
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 149/340 (43%), Gaps = 16/340 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI G+ + + + EM G +PD Y +L+ +L + + +A
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLN-YLCNNGRCR---EA 327
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
F M KG+ KPN+ Y IL+ A + +++ L + E+ L+PD + +N +
Sbjct: 328 RFLFDSMIRKGI---KPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNII 384
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
AY K MI E + ++MK PD++ + LID+ K D F +M+
Sbjct: 385 FTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGV 444
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P + FNS++ KA+ + +M P + + I+ V +A+
Sbjct: 445 APNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQR 504
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ D + ++G V + ++ +C+ G EA + ++G+ PD TY L Y
Sbjct: 505 LIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYC 564
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
+A + + + M +NGI P + T+S+ L G
Sbjct: 565 RAGRIDDAYGVFREMLRNGITP-------GVVTYSTILHG 597
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 130/295 (44%), Gaps = 9/295 (3%)
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
PDP Y+ LI A + +K R NIV +L C R +
Sbjct: 92 PDPCTYSILIGCFCRMGRLEHGFAT---FGLILKSGWRVN-NIVINQLLKGLCDAKRLCE 147
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ---CKPDIITFN 294
++ L K + E PD+ +YN ++ + +E +L M +Q C P+++++
Sbjct: 148 AMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYA 207
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++I+ + DK +F +M +P + T+ ++I KA++ +AE VFQ+M
Sbjct: 208 IVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDK 267
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P TY C+I Y + +E+S G T ++L C NG EA
Sbjct: 268 GVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREA 327
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAY-TKANMKELVQKLLKRMEQNGIVPNKRFF 468
LF++ G+ P+ + Y +L Y TK + E+ LL M +NG+ P+ F
Sbjct: 328 RFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEM-HDLLNLMVENGLSPDHHIF 381
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 144/343 (41%), Gaps = 13/343 (3%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMG--KKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
+ LE+ M + + S I + G +GQ A LF EM + G +P+ Y
Sbjct: 183 EALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYT 242
Query: 185 ALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNAL 242
+I KA+ + +A G FQ+M KG+ KP+ TYN L+ +V +
Sbjct: 243 TVIDGLC----KAQVVDRAEGVFQQMIDKGV---KPDNDTYNCLIHGYLSIGKWKEVVRM 295
Query: 243 FKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
+E+ L PD YTY +++ NG +E + M KP++ + +LI Y
Sbjct: 296 LEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYAT 355
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+ A +M + ++ + P FN + Y K + +A ++F KM +P +
Sbjct: 356 KGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVN 415
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y +I V A F+++ G + N+++ C +A +
Sbjct: 416 YGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEML 475
Query: 423 NMGVTPDSSTYK-LLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
N G+ PD + +L TK + + Q+L+ ME+ G P
Sbjct: 476 NQGIRPDVVFFNTILCNLCTKGQVMK-AQRLIDLMERVGTRPG 517
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 136/340 (40%), Gaps = 8/340 (2%)
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
F + K W + + I L + K L M GC PD YN L+
Sbjct: 117 FGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFC 176
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
+ + +AL + L +G C PN+V+Y I++ VD+ LF E+ + +
Sbjct: 177 NEKRAEEAL-ELLHMMADSQG-RSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGI 234
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
P++ TY V+D K ++ E V +M KPD T+N LI Y + ++ +
Sbjct: 235 QPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVR 294
Query: 312 VFKSLMHSKEKPTLPTFNSM---IINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+ + + KP T+ S+ + N G+ R +A ++F M P+ Y +I
Sbjct: 295 MLEEMSAHGLKPDCYTYGSLLNYLCNNGRCR---EARFLFDSMIRKGIKPNVAIYGILIH 351
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
Y +S ++ + + + G N + AY + EA +F G++P
Sbjct: 352 GYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSP 411
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
D Y L A K + +M G+ PN F
Sbjct: 412 DVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVF 451
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 155/361 (42%), Gaps = 7/361 (1%)
Query: 109 SEHCF-LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWL 167
H F ++F K + + +F M KQ+ D Y LI + K G+ A+
Sbjct: 377 DHHIFNIIFTAYAKKAMIDEAMHIFNKM-KQQGLSPDVVNYGALIDALCKLGRVDDAVLK 435
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
F++M N G P+ V+N+L+ L T DK + AK YF+ + + +P++V +N +L
Sbjct: 436 FNQMMNEGVAPNIFVFNSLVYG-LCTVDKWEK-AKEF-YFEMLN--QGIRPDVVFFNTIL 490
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
V + L + P + +Y ++ + G I E L M S K
Sbjct: 491 CNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLK 550
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
PD T+N L+ Y + D VF+ ++ + P + T+++++ R +A+ +
Sbjct: 551 PDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKEL 610
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
+ M + Y I+ + V A ++F L ++++T N M+ A
Sbjct: 611 YLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFK 670
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
+G +A LF + G+ PD TY L+ + + E L ME++G PN R
Sbjct: 671 SGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRM 730
Query: 468 F 468
Sbjct: 731 L 731
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 139/327 (42%), Gaps = 11/327 (3%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
KW + + + M D Y L+ + G+ R A +LF M G +P+ ++Y
Sbjct: 288 KWKEVVRMLEEMSAHGLK-PDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIY 346
Query: 184 NALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNA 241
LI H AL++ M G+ P+ +NI+ A A+ +D+
Sbjct: 347 GILI----HGYATKGALSEMHDLLNLMVENGL---SPDHHIFNIIFTAYAKKAMIDEAMH 399
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
+F ++ + L+PD+ Y ++DA K G + + ++M + P+I FN L+
Sbjct: 400 IFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLC 459
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
++K ++ + +++ +P + FN+++ N KA+ + M + P I
Sbjct: 460 TVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVI 519
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
+Y +I + + A + D + +G T N +L YC G +A +F
Sbjct: 520 SYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREM 579
Query: 422 HNMGVTPDSSTYK-LLYKAYTKANMKE 447
G+TP TY +L+ +T E
Sbjct: 580 LRNGITPGVVTYSTILHGLFTTRRFSE 606
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 97/224 (43%), Gaps = 18/224 (8%)
Query: 111 HCFLLFEELGKSDKWLQCLEVFR--WMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLF 168
HC + G+ D+ + L+V ++ W Y+ L+ + G+ A +F
Sbjct: 528 HCLV-----GRIDEAAKSLDVMLSVGLKPDEW------TYNTLLHGYCRAGRIDDAYGVF 576
Query: 169 SEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLR 228
EM +G P Y+ ++ TR ++A L K + NI YNI+L
Sbjct: 577 REMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGK-----QWNIWIYNIILN 631
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
++ VD+ LF+ L +I T+N ++ A K+G ++ + + + S P
Sbjct: 632 GLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVP 691
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
D+ T+ L+ ++ + ++ + +F ++ S P N+++
Sbjct: 692 DVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALV 735
>gi|147845950|emb|CAN82028.1| hypothetical protein VITISV_000613 [Vitis vinifera]
Length = 790
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 166/364 (45%), Gaps = 35/364 (9%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
++GK+D + L +F+ M ++ Y + Y+ +I + ++LFS+M + CR
Sbjct: 339 KIGKAD---ESLTLFQEMT-EKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCR 394
Query: 178 PDPSVYNALIT-----AHLHTRDKA-----------------KALAKALGYFQKMKGMER 215
P+ ++ ++ L D+ + L+K LG+ + +
Sbjct: 395 PNGFTFSVILNVLVAEGQLGRLDEVVEVSNKFMNKSIYAYLVRTLSK-LGHASEAHRLLH 453
Query: 216 CK--------PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ + Y +L + A + L ++HE ++ D YN V+ A GK
Sbjct: 454 LQYDWSFHDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGK 513
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
++ + +MK + PDI ++N+LI S+G+ ++ ++F+ L +S KP + +
Sbjct: 514 LKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIIS 573
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
FNS+I GK +A F++M +P +TY +I +G D V A +FDE+
Sbjct: 574 FNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEML 633
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G + T N +L+ +G EA L+ G+TPDS TY +L + + ++ K
Sbjct: 634 AEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAVLERLQSGSHQKV 693
Query: 448 LVQK 451
V++
Sbjct: 694 RVRR 697
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/373 (20%), Positives = 152/373 (40%), Gaps = 42/373 (11%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
Q VF+ M+++ D Y+ +I + GK G+ ++ LF EM G P+ YN +
Sbjct: 310 QVYMVFKDMKRKHCE-PDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTM 368
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I A + R + K + F KM C+PN T++++L + +++ + E+
Sbjct: 369 IQALANNR----MVDKTIFLFSKMVE-NNCRPNGFTFSVILNVLVAEGQLGRLDEVV-EV 422
Query: 247 HESILAPDIYTY----------------------------NGVMDAY-------GKNGMI 271
+ IY Y G DAY G
Sbjct: 423 SNKFMNKSIYAYLVRTLSKLGHASEAHRLLHLQYDWSFHDEGDRDAYMSMLESLCDAGKT 482
Query: 272 KEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM 331
E +LS++ + D + +N ++ + GK + + +++ + P + ++N +
Sbjct: 483 TEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNIL 542
Query: 332 IINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGK 391
I ++G+A +A +F+++ P I++ +I G ++ A F E+ + G
Sbjct: 543 ISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGL 602
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
V T + ++E + A LF+ G +P+ TY +L ++
Sbjct: 603 SPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVD 662
Query: 452 LLKRMEQNGIVPN 464
L +++Q G+ P+
Sbjct: 663 LYAKLKQQGLTPD 675
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 141/398 (35%), Gaps = 98/398 (24%)
Query: 148 YSKLIAVMGKKGQTR------LAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
Y++L+ ++ K R L + +M G R S N LI
Sbjct: 155 YNRLLVILSKPSALRDSERLDLIRAILDDMERCGVRGSISTINILI-------------- 200
Query: 202 KALGYFQKMKGMERC---------KPNIVTYNILLRACAQARNVDQVNALFKELHESILA 252
G F +ERC + N TY LL+A ++ N ++ ++ EL
Sbjct: 201 ---GIFGGGADVERCFDLVKKWDLQMNCYTYKCLLQAHLRSNNSNKAFEVYVELRRRGYK 257
Query: 253 PDIYTYNGVMDAYGKNGM--------------------------------IKEMESVLSR 280
DI+ YN ++DA K+ + ++ V
Sbjct: 258 LDIFAYNMLLDALAKDNKLTWNLLLVCLQIAELLDCLTVALDNDKIISVEVDQVYMVFKD 317
Query: 281 MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
MK C+PD T+ ++I GK D+ +F+ + P L +N+MI R+
Sbjct: 318 MKRKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRM 377
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD---------------- 384
K ++F KM P+ T+ I+ + + R E+ +
Sbjct: 378 VDKTIFLFSKMVENNCRPNGFTFSVILNVLVAEGQLGRLDEVVEVSNKFMNKSIYAYLVR 437
Query: 385 ELSKLGKDMKVSTL------------------NAMLEAYCMNGLPTEADLLFENSHNMGV 426
LSKLG + L +MLE+ C G TEA L H +
Sbjct: 438 TLSKLGHASEAHRLLHLQYDWSFHDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRI 497
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ D+ Y + A K + L ++M+Q+G P+
Sbjct: 498 STDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPD 535
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/376 (18%), Positives = 150/376 (39%), Gaps = 42/376 (11%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
++R Y D Y+ L+ + K + + L C + + L A + +
Sbjct: 252 RRRGYKLDIFAYNMLLDALAKDNKLTWNLLLV-------CLQIAELLDCLTVALDNDKII 304
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+ + + F+ MK + C+P+ TY I++R + D+ LF+E+ E P++
Sbjct: 305 SVEVDQVYMVFKDMK-RKHCEPDEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLI 363
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID---SYGKRQAFDKMEQVF 313
YN ++ A N M+ + + S+M N C+P+ TF+++++ + G+ D++ +V
Sbjct: 364 AYNTMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVILNVLVAEGQLGRLDEVVEVS 423
Query: 314 KSLM----------------HSKEKPTL---------------PTFNSMIINYGKARLQG 342
M H+ E L + SM+ + A
Sbjct: 424 NKFMNKSIYAYLVRTLSKLGHASEAHRLLHLQYDWSFHDEGDRDAYMSMLESLCDAGKTT 483
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
+A + K+ + + + Y +++ G S ++++++ + G + + N ++
Sbjct: 484 EALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILI 543
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
++ G EA +FE N PD ++ L K + K M + G+
Sbjct: 544 SSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLS 603
Query: 463 PNKRFFLEALETFSSS 478
P+ + +E F +
Sbjct: 604 PDVVTYSTLIECFGKT 619
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 142/327 (43%), Gaps = 7/327 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ LI + ++G+ A+ + M GC PD YN L+ A R +AL L F
Sbjct: 166 HNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALE--LIDF 223
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ +G C+PN VTYN+++ A + +VDQ L L P+ YN V+ +
Sbjct: 224 MRAEG---CEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCS 280
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ + +L M C P+ T N++I++ ++ K+ + + + T
Sbjct: 281 IERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVT 340
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N++I + A + M + P +TY ++ D A E+ ++S
Sbjct: 341 YNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMS 400
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ + ST N ++ +C GL +A +F+ G P+S+TY + TKA E
Sbjct: 401 QNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKME 460
Query: 448 LVQKLLKRMEQNGIVPNK--RFFLEAL 472
+LL M G +K R E+L
Sbjct: 461 QALELLNEMANKGFNTDKMYRVLTESL 487
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 168/400 (42%), Gaps = 53/400 (13%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + K + Q LE+ +M+ + + Y+ +I M ++G A L + + +
Sbjct: 203 ILLQAACKGRGYRQALELIDFMRAEGCE-PNNVTYNVIIDAMCREGDVDQARELLNSLPS 261
Query: 174 SGCRPDPSVYNALITAHLHTR---DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRAC 230
GC+P+ YN ++ D + L + + E C PN T N+++
Sbjct: 262 RGCKPNTVNYNTVLKGFCSIERWVDADEILDEMV--------RENCPPNEATLNVIINTL 313
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
+ + +V +++ + ++ TYN V+ + G + +LS M+S CKPDI
Sbjct: 314 CRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDI 373
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
+T+N ++ ++ E++ + + P TFN++I + + L +A VF++
Sbjct: 374 VTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQ 433
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK---------------LGKDMKV 395
M P+ TY II + +A E+ +E++ L K+ K+
Sbjct: 434 MPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKMYRVLTESLNKEDKI 493
Query: 396 STL-------------------NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+ N +L C NG A + + + G PD STY +L
Sbjct: 494 EEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIIL 553
Query: 437 -----YKAYTKANMKELVQKLLKR-MEQNGIVPNKRFFLE 470
Y+ Y+K +EL+ +L R + N ++ N+ L+
Sbjct: 554 IEGLFYEGYSK-EARELLSRLCSRDVLSNSLIKNEALLLD 592
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 151/333 (45%), Gaps = 12/333 (3%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRD--K 196
R D Y+ L+ K R A+ L MR GC P+ YN +I A D +
Sbjct: 192 RGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQ 251
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDI 255
A+ L +L +G CKPN V YN +L+ C+ R VD + + E+ P+
Sbjct: 252 ARELLNSL----PSRG---CKPNTVNYNTVLKGFCSIERWVD-ADEILDEMVRENCPPNE 303
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
T N +++ + G+++++ L +M + C +++T+N +I ++ D ++ +
Sbjct: 304 ATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSN 363
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
+ KP + T+N+++ A AE + KM+ P T+ II+ +
Sbjct: 364 MQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGL 423
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+ +A E+F ++ + G + +T + ++ G +A L N G D Y++
Sbjct: 424 ILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTD-KMYRV 482
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
L ++ K + E V +++ +++ +GI P +
Sbjct: 483 LTESLNKEDKIEEVVQVVHKLQDSGISPQTVLY 515
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 111/293 (37%), Gaps = 37/293 (12%)
Query: 213 MERCKP--NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
+E C P TY L+ +A ++ + + + A Y +N ++ A + G
Sbjct: 119 VEACGPEATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGR 178
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSY----GKRQAF-------------------- 306
+ + VL M C PD++T+N+L+ + G RQA
Sbjct: 179 VADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNV 238
Query: 307 -----------DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
D+ ++ SL KP +N+++ + A+ + +M
Sbjct: 239 IIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVREN 298
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
P+ T II + + +++SK G V T NA++ C G A
Sbjct: 299 CPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSAL 358
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
L N + G PD TY + K A+ E ++L+ +M QN +P+ F
Sbjct: 359 ELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTF 411
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 82/205 (40%), Gaps = 3/205 (1%)
Query: 273 EMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
++++ L + S+ PD+ N L+ +R +V ++ + T T+ +++
Sbjct: 79 DLDAALRLVGSSPRPPDVPLANRLVRDLCRRGRPADAARVVEA---CGPEATAATYGALV 135
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKD 392
Y +A L A V M A S + +I V+ A + D + G
Sbjct: 136 DGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCA 195
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
V T N +L+A C +A L + G P++ TY ++ A + + ++L
Sbjct: 196 PDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQAREL 255
Query: 453 LKRMEQNGIVPNKRFFLEALETFSS 477
L + G PN + L+ F S
Sbjct: 256 LNSLPSRGCKPNTVNYNTVLKGFCS 280
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 150/341 (43%), Gaps = 16/341 (4%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
++ F W +Q Y D Y+ L+ ++ K G ++ ++ +SGC P+ + LI
Sbjct: 11 IQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIR 70
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
+ KA +AL + + + P++ +N+L+ + N DQ LF+ +
Sbjct: 71 GNC----KAGQAMRALEFLRALDEFS-VAPDVYIFNVLIHGLFKDGNPDQAVKLFENMES 125
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM--KSNQCKPDIITFNLLIDSYGKRQAF 306
S + P+I TYN V+ K+G +++ +L M K + PDI+T+N LI+++ +
Sbjct: 126 SRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRI 185
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY---TPSFITY 363
+ + + + P + T N ++ K G E + + MK P ITY
Sbjct: 186 REACAFREKMKAAGINPDVLTCNILVSGICK---DGDVEEALEILDGMKLAGPVPDVITY 242
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
II V A EI +S D+ T N +L+ +C G+ A + E
Sbjct: 243 NSIIHALCVAGKVVEAAEILKTMS-CSPDL--VTFNTLLDGFCKAGMLPRALEVLEEMCR 299
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ PD TY +L + ++ LL+ + + G +P+
Sbjct: 300 ENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPD 340
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 155/388 (39%), Gaps = 46/388 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L L K Q +++F M+ R + Y+ +I+ + K G A L EM
Sbjct: 102 VLIHGLFKDGNPDQAVKLFENMESSRVK-PEIVTYNTVISGLCKSGNLEKARELLEEMIR 160
Query: 174 SGCR--PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
G + PD YN LI A +A + +A + +KMK P+++T NIL+
Sbjct: 161 KGGKSAPDIVTYNTLINAFY----RASRIREACAFREKMKA-AGINPDVLTCNILVSGIC 215
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ +V++ + + + PD+ TYN ++ A G + E +L K+ C PD++
Sbjct: 216 KDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEIL---KTMSCSPDLV 272
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
TFN L+D + K + +V + + P + T+ ++ + A Y+ +++
Sbjct: 273 TFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEI 332
Query: 352 TAMKYTPSFITYECI----------------------------ITMY-----GYC--DNV 376
Y P I Y + + MY GYC NV
Sbjct: 333 VRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNV 392
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+AREI E+ + + T N +L +G ++A L + G PD TY L
Sbjct: 393 HKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTL 452
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPN 464
KAN L M G PN
Sbjct: 453 IDGLCKANRVREACDLADEMASRGCFPN 480
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 142/351 (40%), Gaps = 11/351 (3%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM 171
C +L + K + LE+ M K + D Y+ +I + G+ A + M
Sbjct: 207 CNILVSGICKDGDVEEALEILDGM-KLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM 265
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
C PD +N L+ KA L +AL ++M E P+++TY IL+
Sbjct: 266 S---CSPDLVTFNTLLDGFC----KAGMLPRALEVLEEMC-RENILPDVITYTILVNGLC 317
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ V L +E+ PD+ Y ++D K+G I+E ++ M C+ ++
Sbjct: 318 RVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVV 377
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
++ L+ Y + K ++ ++ P L T+N ++ K KA + +
Sbjct: 378 MYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDL 437
Query: 352 TAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
A Y P +TY +I + V A ++ DE++ G TL +++ C G
Sbjct: 438 VARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRV 497
Query: 412 TEA-DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+A L+ E S P+ Y L K++ + +L M G+
Sbjct: 498 DDAWSLVVEMSRKRH-APNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGV 547
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 124/299 (41%), Gaps = 40/299 (13%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A+ +F + K ++ +YN LL ++ + + ++K+L S +P++ T+ ++
Sbjct: 10 AIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILI 69
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
K G L + PD+ FN+LI K D+ ++F+++ S+ K
Sbjct: 70 RGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVK 129
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMT--AMKYTPSFITYE---------------- 364
P + T+N++I K+ KA + ++M K P +TY
Sbjct: 130 PEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREAC 189
Query: 365 -----------------CIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
C I + G C +V A EI D + G V T N+++ A
Sbjct: 190 AFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHAL 249
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
C+ G EA + + M +PD T+ L + KA M ++L+ M + I+P+
Sbjct: 250 CVAGKVVEAAEILK---TMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPD 305
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 104/253 (41%), Gaps = 5/253 (1%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
++ YI D Y+ L+ + K G+ A L EM GCR +Y++L++ + +A
Sbjct: 334 RQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYC----RA 389
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+ KA +M + P + TYNI+L + ++ + +L +L PD+ T
Sbjct: 390 GNVHKAREILAEMVSINMVPP-LFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVT 448
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN ++D K ++E + M S C P+ +T ++ + D + +
Sbjct: 449 YNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMS 508
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
+ P + + S+I K+ A V M Y +I + V+
Sbjct: 509 RKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVA 568
Query: 378 RAREIFDELSKLG 390
A ++DE+ G
Sbjct: 569 EAMAMYDEMVARG 581
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 60/151 (39%), Gaps = 5/151 (3%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
R Y+ D Y+ LI + K + R A L EM + GC P+ +++
Sbjct: 440 RGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDD 499
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
A + + +K R PN+V Y L+ ++ +D + + +A D + Y
Sbjct: 500 AWSLVVEMSRK-----RHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAY 554
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
++ + G + E ++ M + PD
Sbjct: 555 RKLIVSMSHGGRVAEAMAMYDEMVARGFLPD 585
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 147/331 (44%), Gaps = 11/331 (3%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K R ++ D Y+ +I +G+ LA+ +F E+ C P Y LI A + D
Sbjct: 165 KSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATI--LDG 222
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+A L KG+E P+ +TYN ++R + VD+ L + L PDI
Sbjct: 223 GIDVAMKLLDEMLSKGLE---PDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDII 279
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TYN ++ G E E ++S M S CKP+++T ++LI + + ++ + +S+
Sbjct: 280 TYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSM 339
Query: 317 MHSKEKPTLPTFNSMIINYGK-ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC-- 373
KP ++ +I + + RL E++ + M + P + Y I M G C
Sbjct: 340 KEKGLKPDAYCYDPLIAGFCREGRLDLATEFL-EYMISDGCLPDIVNYNTI--MAGLCRT 396
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+A E+F++L ++G VS+ N + A +G A + N G+ PD TY
Sbjct: 397 GKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITY 456
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L + M + +LL M+ PN
Sbjct: 457 NSLISCLCRDGMVDEAIELLVDMQSGRYRPN 487
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 160/353 (45%), Gaps = 25/353 (7%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
+GK+ + ++ LE R+ D Y+ LI+ K Q A + M++ G P
Sbjct: 120 IGKATRVMEILE--------RYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLP 171
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
D YN +I +R K L AL F+++ + C+P ++TY IL+ A +D
Sbjct: 172 DVVTYNIMI-GSFCSRGK---LDLALEIFEELLK-DNCEPTVITYTILIEATILDGGIDV 226
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
L E+ L PD TYN ++ K M+ + +L + S CKPDIIT+N+L+
Sbjct: 227 AMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLR 286
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK--- 355
+ R + + E++ ++ KP + T + +I G GK E + +MK
Sbjct: 287 TLLSRGKWSEGEKLISEMISIGCKPNVVTHSILI---GTLCRDGKVEEAVNLLRSMKEKG 343
Query: 356 YTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P Y+ +I G+C + A E + + G + N ++ C G +
Sbjct: 344 LKPDAYCYDPLIA--GFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQ 401
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKA-YTKANMKELVQKLLKRMEQNGIVPNK 465
A +FE +G P+ S+Y L+ A ++ + ++ +LK + Q GI P++
Sbjct: 402 ALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQ-GIDPDE 453
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 152/352 (43%), Gaps = 10/352 (2%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
LE+F + K Y+ LI G +AM L EM + G PD YNA+I
Sbjct: 193 LEIFEELLKDNCE-PTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIR 251
Query: 189 AHLHTR--DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
DKA L ++L +G CKP+I+TYNILLR + L E+
Sbjct: 252 GMCKEMMVDKAFELLRSLSS----RG---CKPDIITYNILLRTLLSRGKWSEGEKLISEM 304
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
P++ T++ ++ ++G ++E ++L MK KPD ++ LI + +
Sbjct: 305 ISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRL 364
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
D + + ++ P + +N+++ + +A VF+K+ + P+ +Y +
Sbjct: 365 DLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTL 424
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
+ + RA E+ +L G D T N+++ C +G+ EA L + +
Sbjct: 425 FSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRY 484
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
P+ +Y ++ K N ++L M + G PN+ ++ +E S
Sbjct: 485 RPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFS 536
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 116/252 (46%), Gaps = 11/252 (4%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+++ L++ +RN+ + + E+ E PD++ YN ++ + K ++ V
Sbjct: 102 PDVILCTKLIKGFFNSRNIGKATRVM-EILERYGKPDVFAYNALISGFIKANQLENANRV 160
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L RMKS PD++T+N++I S+ R D ++F+ L+ +PT+ T+ +I
Sbjct: 161 LDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILI---EA 217
Query: 338 ARLQGKAEY---VFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKD 392
L G + + +M + P +TY II G C V +A E+ LS G
Sbjct: 218 TILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIR--GMCKEMMVDKAFELLRSLSSRGCK 275
Query: 393 MKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
+ T N +L G +E + L ++G P+ T+ +L + E L
Sbjct: 276 PDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNL 335
Query: 453 LKRMEQNGIVPN 464
L+ M++ G+ P+
Sbjct: 336 LRSMKEKGLKPD 347
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 160/373 (42%), Gaps = 32/373 (8%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ + + K + L + R M++ I + IYS +I + K G+ A LF+EM+
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQA 233
G PD YN++I + + A Q+M +ER P++VTYN L+ A +
Sbjct: 285 GIFPDLFTYNSMIVGFC----SSGRWSDAEQLLQEM--LERKISPDVVTYNALINAFVKE 338
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ L+ E+ + P+ TYN ++D + K + E + M + C PD+ TF
Sbjct: 339 GKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTF 398
Query: 294 NLLIDSY-GKRQAFDKMEQVFKSLMHSKEKPTL----PTFNSMIINYGKARLQGKAEYVF 348
LID Y G ++ D ME L+H + L T+N++I + A +
Sbjct: 399 TTLIDGYCGAKRIDDGME-----LLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLS 453
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVS---------- 396
Q+M + P +T C + G CDN + A E+F + K D+ S
Sbjct: 454 QQMISSGVCPDIVT--CNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDV 511
Query: 397 -TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
T N ++ G EA+ L+E + G+ PD+ TY + K + + ++
Sbjct: 512 LTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVS 571
Query: 456 MEQNGIVPNKRFF 468
M PN F
Sbjct: 572 MGSKSFSPNVVTF 584
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 143/329 (43%), Gaps = 17/329 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ L+ + ++G+ A+ L M G +P Y ++ D AL
Sbjct: 187 FTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL----NLL 242
Query: 208 QKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+KM+ + PN+V Y+ ++ + C R+ D N LF E+ E + PD++TYN ++ +
Sbjct: 243 RKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQN-LFTEMQEKGIFPDLFTYNSMIVGFC 301
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+G + E +L M + PD++T+N LI+++ K F + +++ ++ P
Sbjct: 302 SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 361
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T+NSMI + K AE +F M +P T+ +I Y + E+ E+
Sbjct: 362 TYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 421
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
+ G T N ++ +C+ G A L + + GV PD T L
Sbjct: 422 PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKL 481
Query: 447 ELVQKLLKRMEQ-----------NGIVPN 464
+ ++ K M++ NG+ P+
Sbjct: 482 KDALEMFKAMQKSKMDLDASHPFNGVEPD 510
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 152/332 (45%), Gaps = 23/332 (6%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRN-SGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
Y ++ M KKG T A+ L +M S P+ +Y+A+I + +D + A+ L
Sbjct: 222 YGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSL--CKDGRHSDAQNLFT 279
Query: 207 FQKMKGMERCKPNIVTYN-ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+ KG+ P++ TYN +++ C+ R D L +E+ E ++PD+ TYN +++A+
Sbjct: 280 EMQEKGI---FPDLFTYNSMIVGFCSSGRWSD-AEQLLQEMLERKISPDVVTYNALINAF 335
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G E + M P+ IT+N +ID + K+ D E +F + P +
Sbjct: 336 VKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDV 395
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIF 383
TF ++I Y A+ + +M + +TY +I +G+C +++ A ++
Sbjct: 396 FTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLI--HGFCLVGDLNAALDLS 453
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF----------ENSHNM-GVTPDSST 432
++ G + T N +L+ C NG +A +F + SH GV PD T
Sbjct: 454 QQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLT 513
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y +L ++L + M GIVP+
Sbjct: 514 YNILICGLINEGKFLEAEELYEEMPHRGIVPD 545
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 149/359 (41%), Gaps = 27/359 (7%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
S +W ++ + M +R D Y+ LI K+G+ A L+ EM G P+
Sbjct: 303 SGRWSDAEQLLQEML-ERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 361
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
YN++I +D+ A A+ + Y KG C P++ T+ L+ A+ +D
Sbjct: 362 TYNSMIDGFCK-QDRLDA-AEDMFYLMATKG---CSPDVFTFTTLIDGYCGAKRIDDGME 416
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
L E+ L + TYN ++ + G + + +M S+ PDI+T N L+D
Sbjct: 417 LLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 476
Query: 302 KRQAFDKMEQVFKSLMHSK-----------EKPTLPTFNSMI---INYGKARLQGKAEYV 347
++FK++ SK +P + T+N +I IN GK +AE +
Sbjct: 477 DNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFL---EAEEL 533
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+++M P ITY +I G C + A ++F + V T N ++ Y
Sbjct: 534 YEEMPHRGIVPDTITYSSMID--GLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGY 591
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
C G + LF G+ D+ Y L + K + + M +G+ P+
Sbjct: 592 CKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPD 650
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 144/340 (42%), Gaps = 22/340 (6%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+ KL+ V+ + + L + L+ +M R D +N LI L AL F
Sbjct: 82 FCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFC----SCSKLPFALSTF 137
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K+ + P++VT+ LL V + F ++ E+ P++ T+ +M+ +
Sbjct: 138 GKITKLGL-HPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCR 196
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR-------QAFDKMEQVFKSLMHSK 320
G I E ++L RM + +P IT+ ++D K+ KME+V S
Sbjct: 197 EGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEV------SH 250
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV--SR 378
P + ++++I + K A+ +F +M P TY +I G+C + S
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIV--GFCSSGRWSD 308
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A ++ E+ + V T NA++ A+ G EA L++ G+ P++ TY +
Sbjct: 309 AEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMID 368
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ K + + + + M G P+ F ++ + +
Sbjct: 369 GFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGA 408
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 136/303 (44%), Gaps = 8/303 (2%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME-RCKPNIVT 222
A+ LFS+M S RP PSV + + R + L +L +QKM+ + RC +I +
Sbjct: 63 AIDLFSDMLRS--RPLPSVVDFCKLMGVVVRMERPDLVISL--YQKMERKQIRC--DIYS 116
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
+NIL++ + + F ++ + L PD+ T+ ++ + E +M
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF 176
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
C+P+++TF L++ + + + +M +PT T+ +++ K
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236
Query: 343 KAEYVFQKMTAMKYT-PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
A + +KM + + P+ + Y II S A+ +F E+ + G + T N+M
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ +C +G ++A+ L + ++PD TY L A+ K +L M GI
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGI 356
Query: 462 VPN 464
+PN
Sbjct: 357 IPN 359
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 124/329 (37%), Gaps = 48/329 (14%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
K K+ + E++ M R I +T Y+ +I K+ + A +F M GC PD
Sbjct: 337 KEGKFFEAAELYDEMLP-RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDV 395
Query: 181 SVYNALITAH-------------------------------LHTRDKAKALAKALGYFQK 209
+ LI + +H L AL Q+
Sbjct: 396 FTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQ 455
Query: 210 MKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL-----------APDIYTY 258
M C P+IVT N LL + +FK + +S + PD+ TY
Sbjct: 456 MISSGVC-PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTY 514
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N ++ G E E + M PD IT++ +ID K+ D+ Q+F S+
Sbjct: 515 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGS 574
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGY--CDNV 376
P + TFN++I Y KA +F +M I Y I +YG+ N+
Sbjct: 575 KSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIY--ITLIYGFRKVGNI 632
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+ A +IF E+ G T+ ML +
Sbjct: 633 NGALDIFQEMISSGVYPDTITIRNMLTGF 661
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 92/218 (42%), Gaps = 15/218 (6%)
Query: 112 CFLLFEELGKSDKWLQCLEVFRWMQKQRWYI----------ADTGIYSKLIAVMGKKGQT 161
C L + L + K LE+F+ MQK + + D Y+ LI + +G+
Sbjct: 468 CNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKF 527
Query: 162 RLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV 221
A L+ EM + G PD Y+++I K L +A F M G + PN+V
Sbjct: 528 LEAEELYEEMPHRGIVPDTITYSSMIDGLC----KQSRLDEATQMFVSM-GSKSFSPNVV 582
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
T+N L+ +A VD LF E+ + D Y ++ + K G I + M
Sbjct: 583 TFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEM 642
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
S+ PD IT ++ + ++ ++ + + L S
Sbjct: 643 ISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQMS 680
>gi|410110139|gb|AFV61149.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
salviifolia]
Length = 378
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 5/255 (1%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ +FS ++ SG PD YNA+I KAK +A +MK PN +Y
Sbjct: 7 AISIFSRLKRSGFTPDLVAYNAMINVF----GKAKLFREARSLISEMK-TAGVMPNTTSY 61
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
+ LL + + + ++F E+ E D+ T N ++D YG+ GM KE + + M+
Sbjct: 62 STLLSMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 121
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+P+++++N L+ YG + F + +F+ + + + T+NSM++ YGK K
Sbjct: 122 MGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEK 181
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A + Q+M + P+ ITY II+++G + RA +F +L G ++ M+
Sbjct: 182 ANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIV 241
Query: 404 AYCMNGLPTEADLLF 418
AY GL A L
Sbjct: 242 AYERAGLVAHAKRLL 256
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 130/263 (49%), Gaps = 1/263 (0%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+KA+ F ++K P++V YN ++ +A+ + +L E+ + + P+ +Y+
Sbjct: 5 SKAISIFSRLK-RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYST 63
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ Y +N E SV S M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 64 LLSMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 123
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P + ++N+++ YG A L G+A ++F+ M + +TY ++ +YG +A
Sbjct: 124 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 183
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ E+ G + T + ++ + G A +LF+ + GV D ++ + AY
Sbjct: 184 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY 243
Query: 441 TKANMKELVQKLLKRMEQNGIVP 463
+A + ++LL +++ +P
Sbjct: 244 ERAGLVAHAKRLLHELKRPDNIP 266
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 148/360 (41%), Gaps = 42/360 (11%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L SEM+ +G P+ + Y+ L++ ++
Sbjct: 15 KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLSMYVEN--- 71
Query: 197 AKALAKALGYFQKMK--------------------------------GMER--CKPNIVT 222
K +AL F +M+ GM + +PN+V+
Sbjct: 72 -KKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 130
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
YN LLR A + LF+ + + ++ TYN +M YGK ++ +++ M+
Sbjct: 131 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQ 190
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
S +P+ IT++ +I +GK D+ +F+ L S + F +MI+ Y +A L
Sbjct: 191 SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVA 250
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
A+ + ++ P I + I + + A +F + G+ ++ M+
Sbjct: 251 HAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQAVDAGEVKDITVFERMI 306
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+ +F+ +G PDS ++ AY K + + M++ G V
Sbjct: 307 HLLSKYKKYSNVXEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVGCV 366
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 75/159 (47%)
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+ K +F L S P L +N+MI +GKA+L +A + +M P+ +Y
Sbjct: 4 YSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYST 63
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+++MY A +F E+ ++ + ++T N M++ Y G+ EAD LF MG
Sbjct: 64 LLSMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 123
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ P+ +Y L + Y A + L + M++ I N
Sbjct: 124 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 162
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 86/189 (45%)
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
S+ SR+K + PD++ +N +I+ +GK + F + + + + P ++++++ Y
Sbjct: 9 SIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLSMY 68
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
+ + +A VF +M +K T +I +YG A ++F + K+G + V
Sbjct: 69 VENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 128
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+ N +L Y L EA LF + + TY + Y K E L++
Sbjct: 129 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 188
Query: 456 MEQNGIVPN 464
M+ GI PN
Sbjct: 189 MQSRGIEPN 197
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 154/345 (44%), Gaps = 16/345 (4%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K + + D Y+ +++ M +G+ A + EM+ G PD YN LI + D
Sbjct: 287 KSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGD- 342
Query: 197 AKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
L A Y +M +GM P TYN L+ ++ L +E+ E + D
Sbjct: 343 ---LEMAFAYRDEMVKQGM---VPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLD 396
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
TYN +++ Y ++G K+ ++ M ++ +P T+ LI ++ + +++F+
Sbjct: 397 SVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFE 456
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
++ KP L N+++ + +A + ++M M P +TY C+ M G C
Sbjct: 457 KVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCL--MRGLCG 514
Query: 375 N--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
ARE+ E+ + G + N ++ Y G A ++ + ++G P T
Sbjct: 515 EGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLT 574
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
Y L K +K EL ++LL+ M+ GIVPN F +E S+
Sbjct: 575 YNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSN 619
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 137/321 (42%), Gaps = 12/321 (3%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
EV R M K+ + D+ Y+ LI G +A EM G P YN LI
Sbjct: 313 EVLREM-KEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHG 371
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
L +K +A A+ L + KG+ + VTYNIL+ Q + + AL E+
Sbjct: 372 -LFMENKIEA-AEILIREIREKGIVL---DSVTYNILINGYCQHGDAKKAFALHDEMMTD 426
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+ P +TY ++ + +E + + ++ KPD++ N L+D + D+
Sbjct: 427 GIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRA 486
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECI 366
+ K + P T+N ++ +GK E + M MK P I+Y +
Sbjct: 487 FSLLKEMDMMSINPDDVTYNCLMRGLCG---EGKFEEARELMGEMKRRGIKPDHISYNTL 543
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I+ Y + A + DE+ LG + + T NA+L+ N A+ L + G+
Sbjct: 544 ISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGI 603
Query: 427 TPDSSTYKLLYKAYTKANMKE 447
P+ S++ + +A + + K+
Sbjct: 604 VPNDSSFCSVIEAMSNLDAKK 624
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 135/350 (38%), Gaps = 22/350 (6%)
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
F ++ Y D IAV+ K + L E+ S ++++ L+ AH
Sbjct: 89 FNFVNHIDLYRLDFQTQCLAIAVISKLSSPKPVTQLLKEVVTSRKNSIRNLFDELVLAHD 148
Query: 192 HTRDKAKALAKALG----------------YFQKMKGMERCKPNIVTYNILLRACAQARN 235
K+ L L Y K KG P T N +L ++
Sbjct: 149 RLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGF---YPKTETCNHILTLLSRLNR 205
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
++ + +++ + ++YT+N +++ K G +K+ + L M+ KP I+T+N
Sbjct: 206 IENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNT 265
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
L+ + R + + + +P + T+N ++ +G+A V ++M +
Sbjct: 266 LVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCN---EGRASEVLREMKEIG 322
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
P ++Y +I ++ A DE+ K G T N ++ M A+
Sbjct: 323 LVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAE 382
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+L G+ DS TY +L Y + + L M +GI P +
Sbjct: 383 ILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQ 432
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 140/324 (43%), Gaps = 11/324 (3%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ L+ K+G+ + + MR G PD YN+LI KAK + +A Y
Sbjct: 462 VYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFC----KAKRMEEARTY 517
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+M R +PN TY + ++A ++ + F E+ + P++ Y +++ +
Sbjct: 518 LMEMLE-RRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHC 576
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K G + E SV + S + D+ T+++LI + KM + F +EK LP
Sbjct: 577 KEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRN---GKMHEAFGIFSELQEKGLLP 633
Query: 327 ---TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T+NS+I K KA + ++M P +TY +I + RA+ +F
Sbjct: 634 NAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLF 693
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
D++ G T AM++ YC + PT A L E GV PD+ Y ++ K
Sbjct: 694 DDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKE 753
Query: 444 NMKELVQKLLKRMEQNGIVPNKRF 467
E L + M + G F
Sbjct: 754 EKFEKALDLFQEMLEKGFASTVSF 777
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 144/352 (40%), Gaps = 30/352 (8%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL-- 200
A+ I++ L+ + K G+ A+ + EM G PD Y+ LI H ++ A+A
Sbjct: 353 ANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFEL 412
Query: 201 ----------AKALGYFQKMKGMERC------------------KPNIVTYNILLRACAQ 232
L Y + G+ RC KPN V Y L+ A A+
Sbjct: 413 LDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAK 472
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
V++ + + + E + PD++ YN ++ + K ++E + L M + +P+ T
Sbjct: 473 EGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHT 532
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+ ID Y K + ++ F ++ P + + ++I + K +A VF+ +
Sbjct: 533 YGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFIL 592
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ + TY +I + A IF EL + G T N+++ C G
Sbjct: 593 SRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVD 652
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+A L E G+ PD TY +L KA E + L +E G+ PN
Sbjct: 653 KASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPN 704
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 144/311 (46%), Gaps = 12/311 (3%)
Query: 158 KGQTRLAMW-LFSEMRNSGCRPDPSVYNALITAHL---HTRDKAKALAKALGYFQKMKGM 213
KG W +F M PD Y +I+AH + +D + L + G
Sbjct: 192 KGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEM--------GE 243
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
+ C PN+VTYN+++ +AR +D+ L + + + L PD+YTY+ +++ + +E
Sbjct: 244 KGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSRE 303
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
+ +L M KP+ IT+N LID + ++ ++ ++ ++ + L +N+++
Sbjct: 304 AKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLN 363
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
KA KA + Q+M P TY +I + N++RA E+ DE+ K
Sbjct: 364 GVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAP 423
Query: 394 KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
V T + ++ C G + + G+ P++ Y L A+ K E + +L
Sbjct: 424 TVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMIL 483
Query: 454 KRMEQNGIVPN 464
+RM + GI+P+
Sbjct: 484 ERMREQGILPD 494
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 170/402 (42%), Gaps = 16/402 (3%)
Query: 85 VLMRSFSDKEPLVRTLNKYVKVVRSEH------CFLLFEELGKSDKWLQCLEVFRWMQKQ 138
+LM S+ LV +N ++ E C L +L K +K +VF M
Sbjct: 150 MLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAH 209
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DK 196
+ + D Y+ +I+ K G + A + EM GC P+ YN +I R D+
Sbjct: 210 K-VLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDE 268
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
A L +++ KG+ P++ TY+IL+ + + + E+ + L P+
Sbjct: 269 AIELKRSM----VDKGL---VPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPI 321
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TYN ++D + + G I++ + M + + ++I +N L++ K +K ++ + +
Sbjct: 322 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 381
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
M +P T++ +I + + + +A + +M K P+ +TY II C N+
Sbjct: 382 MEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNL 441
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
I E+ G ++ A+ G E+ ++ E G+ PD Y L
Sbjct: 442 QGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSL 501
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ KA E + L M + + PN + ++ +S +
Sbjct: 502 IIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKA 543
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 151/326 (46%), Gaps = 11/326 (3%)
Query: 140 WYIADTGIYSKLIAVMGKKGQTRLAMW--LFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
WY G S LI + + + LA+ + R+ P+ +++ L+ ++ K
Sbjct: 107 WY----GPASDLIKCIIRNSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSY----RKM 158
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
L +A+ F K E +P++++ N LL + V+ +F + + PD+YT
Sbjct: 159 GFLVEAVNVFLGPKNFEF-RPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYT 217
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
Y ++ A+ K G +K+ + VL M C P+++T+N++I + + D+ ++ +S++
Sbjct: 218 YTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMV 277
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
P L T++ +I + + +A+ + +M + P ITY +I + ++
Sbjct: 278 DKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIE 337
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
+A I DE+ G + + N +L C G +A + + GV PDS TY LL
Sbjct: 338 QAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLI 397
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVP 463
+ + + +LL M++ + P
Sbjct: 398 EGHCRGQNMARAFELLDEMKKRKLAP 423
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 151/349 (43%), Gaps = 17/349 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI + K G+ A LF ++ G P+ Y A++ + +++ A
Sbjct: 669 DIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAA---- 724
Query: 204 LGYFQKMKGM--ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
FQ ++ M P+ YN++L C + ++ LF+E+ E A + ++N +
Sbjct: 725 ---FQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTL 780
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
++ Y K+G ++E +L M Q P+ +T+ LID K + ++++ +
Sbjct: 781 IEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNV 840
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
PT T+ S++ Y + +F++M A P +TY +I Y NV A +
Sbjct: 841 MPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACK 900
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ DE+ G M V+ +A+++A C E L G T ++ + +
Sbjct: 901 LKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQ 960
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTD 490
A + ++L+ M + G V N + + G+Q+G+ D
Sbjct: 961 IAGNMDEAAEVLRSMVKFGWVSNTT-------SLGDLVDGNQNGANSED 1002
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 161/382 (42%), Gaps = 51/382 (13%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+ + D Y LI + ++R A + EM + G +P+P YNALI + D
Sbjct: 278 DKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIE 337
Query: 198 KALAKALGYFQKMKGMERC--KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
+A F+ M C + N++ +N LL +A +++ + +E+ E + PD
Sbjct: 338 QA-------FRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDS 390
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY---GKRQAFDKMEQ- 311
TY+ +++ + + + +L MK + P ++T++++I+ G Q + + +
Sbjct: 391 QTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILRE 450
Query: 312 -----------VFKSLM--HSKEK------------------PTLPTFNSMIINYGKARL 340
V+ +LM H+KE P + +NS+II + KA+
Sbjct: 451 MVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKR 510
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
+A +M + P+ TY I Y + A F+E+ G V A
Sbjct: 511 MEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTA 570
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
++E +C G TEA +F + V D TY +L ++ + +++ G
Sbjct: 571 LIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG 630
Query: 461 IVPNKRFFLEALETFSSSLAGS 482
++PN T++S ++GS
Sbjct: 631 LLPNAF-------TYNSLISGS 645
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 148/376 (39%), Gaps = 45/376 (11%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
+++ + D Y+ LI K + A EM RP+ Y A I + K
Sbjct: 487 REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGY----SK 542
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
A + A YF +M PN+ Y L+ + NV + ++F+ + + D+
Sbjct: 543 AGEMEIADRYFNEMLSC-GVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQ 601
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TY+ ++ +NG + E + S ++ P+ T+N LI K+ DK Q+ + +
Sbjct: 602 TYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEM 661
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--- 373
P + T+N +I KA +A+ +F + TP+ +TY ++ GYC
Sbjct: 662 CIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVD--GYCKSK 719
Query: 374 ----------------------------------DNVSRAREIFDELSKLGKDMKVSTLN 399
+ +A ++F E+ + G VS N
Sbjct: 720 NPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVS-FN 778
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
++E YC +G EA+ L E P+ TY L KA M ++L M++
Sbjct: 779 TLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQER 838
Query: 460 GIVPNKRFFLEALETF 475
++P + + L +
Sbjct: 839 NVMPTAKTYTSLLHGY 854
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 143/311 (45%), Gaps = 22/311 (7%)
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQA 233
C D Y +LI K K L +AL + KM KG P++ TY ++ A
Sbjct: 7 CSADFVTYTSLIQGLC----KVKRLEQALIFLGKMVSKGFH---PDVYTYTAVIHALCVE 59
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ + +E+ L P++ TY ++D K G + E ++LS+M+ +C P +T+
Sbjct: 60 NRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTY 118
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N LI K + + + + +++S P + T+ ++I + K++ A VF+++ A
Sbjct: 119 NSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVA 178
Query: 354 MKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDM-KVSTLNAMLEAYCMNGL 410
+ P +TY C+I G C + A ++F + K G M T N+++ +C G
Sbjct: 179 RGFRPDVVTYSCLID--GLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGK 236
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
EA L E G +PD TY L + K + LL +M + G+ P+
Sbjct: 237 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPD------ 290
Query: 471 ALETFSSSLAG 481
+ TF+S + G
Sbjct: 291 -VVTFTSLMDG 300
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 153/348 (43%), Gaps = 26/348 (7%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG-CRPD 179
KS K L VF + R + D YS LI + K+G+ + A+ LF M SG C P+
Sbjct: 162 KSKKSDDALRVFEQLV-ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPN 220
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQV 239
YN+LI+ + + +A+ ++M P++VTY L+ + +D
Sbjct: 221 TVTYNSLISGFC----RMGKMDEAMNLLERMAETGS-SPDVVTYTTLMNGFCKLARLDDA 275
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
L ++ L PD+ T+ +MD + + + +L M+ C P + T+N ++D
Sbjct: 276 YDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDG 335
Query: 300 YGKRQAFDKMEQVFKSLMHSKE-KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
Y + +++E+ K ++ + P + +FN MI K +A + ++ + P
Sbjct: 336 YCRA---NQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNP 392
Query: 359 SFITYECIITMYGYC-----DNVSRA-REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ Y +I G C D R R++ +E L + STL + C G+
Sbjct: 393 DVVMYTTVID--GLCREKKVDEACRVYRKMLEEPGCLPNSITYSTL---ITGLCNAGMLD 447
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
A E G P+ TY LL A+ KAN E ++LL M Q G
Sbjct: 448 RARGYIEK----GCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 152/353 (43%), Gaps = 14/353 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + L K + Q L +F + + D Y+ +I + + + A EM N
Sbjct: 17 LIQGLCKVKRLEQAL-IFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANR 75
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
P+ Y LI K + +A+ KM+ ++C P VTYN L+ +A
Sbjct: 76 NLTPNVVTYTVLIDGLC----KGGRVDEAVALLSKMR--KKCVPTAVTYNSLISGLCKAE 129
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ L +E+ S PDI+TY ++ + K+ + V ++ + +PD++T++
Sbjct: 130 RASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYS 189
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKE-KPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
LID K + +F ++ S P T+NS+I + + +A + ++M
Sbjct: 190 CLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAE 249
Query: 354 MKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+P +TY + M G+C + A ++ +++++ G V T ++++ C
Sbjct: 250 TGSSPDVVTYTTL--MNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRL 307
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
++A + +P TY + Y +AN E +K + +E+ PN
Sbjct: 308 SDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPN 358
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 135/322 (41%), Gaps = 7/322 (2%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
AD Y+ LI + K + A+ +M + G PD Y A+I H L +
Sbjct: 9 ADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVI----HALCVENRLHE 64
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A + ++M PN+VTY +L+ + VD+ AL ++ + + P TYN ++
Sbjct: 65 ARKFLEEMAN-RNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLI 122
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
K E +L M + C PDI T+ LI + K + D +VF+ L+ +
Sbjct: 123 SGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFR 182
Query: 323 PTLPTFNSMIINYGK-ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P + T++ +I K RL+ + + + + P+ +TY +I+ + + A
Sbjct: 183 PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN 242
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ + +++ G V T ++ +C +A L G+TPD T+ L
Sbjct: 243 LLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLC 302
Query: 442 KANMKELVQKLLKRMEQNGIVP 463
+ N +L M + P
Sbjct: 303 RENRLSDAVHILGEMRRKSCSP 324
>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
Length = 720
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 151/333 (45%), Gaps = 13/333 (3%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMW--LFSEMRNSGCRPDPSVYNALITAHLHTR 194
+Q + +D YS +I + + + + + L+ E+ + D + N +I
Sbjct: 236 RQDGFQSDFINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIILGFAKAG 295
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
D +AL YF M P T+ ++ A ++ A+F+E+ E L P
Sbjct: 296 DPNRAL-----YFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPR 350
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
I +N ++ Y + G +KE ES++S M+ + PD T+ LL+D+Y ++ + K
Sbjct: 351 IKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLK 410
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT---PSFITYECIITMYG 371
+ +P F+ ++ +Y R +G+ + F+ + MK + P Y +I +G
Sbjct: 411 QMEARNVQPNTFIFSRILASY---RDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFG 467
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ + A E +D + G + V T N +++ + +G A LFE G P +
Sbjct: 468 KFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPT 527
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
TY ++ + + + V+ LL +M+ G++PN
Sbjct: 528 TYNIMINSLGEQEKWDEVKILLGKMQSQGLLPN 560
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 164/351 (46%), Gaps = 19/351 (5%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA-HLHTR-DKAKALA 201
D + + +I K G A++ S ++ SG P S + A+I+A H R ++A+A+
Sbjct: 280 DGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAI- 338
Query: 202 KALGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
F++MK G+ KP I +N LL+ A+ ++ + ++ E+ +S L+PD +TY
Sbjct: 339 -----FEEMKEGGL---KPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYG 390
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
++DAY G + +L +M++ +P+ F+ ++ SY R + K +V + + +S
Sbjct: 391 LLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNS 450
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY---GYCDNV 376
KP +N MI +GK A + +M + P +T+ +I + GY D
Sbjct: 451 NVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHD-- 508
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
RA E+F+E+ + G +T N M+ + E +L + G+ P+ TY L
Sbjct: 509 -RAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTL 567
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSA 487
Y + L+ M+ G+ P+ + + F+ Q+ +A
Sbjct: 568 VDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNA 618
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 151/355 (42%), Gaps = 40/355 (11%)
Query: 145 TGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKAL 204
T + +I+ +G G+T A +F EM+ G +P +NAL+ + + +L +A
Sbjct: 316 TSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYA----RKGSLKEAE 371
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACA---------------QARNVDQVNALF------ 243
+M+ P+ TY +L+ A A +ARNV +F
Sbjct: 372 SIISEMEK-SGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILAS 430
Query: 244 --------------KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
+E+ S + PD + YN ++D +GK + RM S +PD
Sbjct: 431 YRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPD 490
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
++T+N LID + K D+ ++F+ + P T+N MI + G+ + + +
Sbjct: 491 VVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLG 550
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
KM + P+ +TY ++ +YG+ + A + + + G + NA++ A+ G
Sbjct: 551 KMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRG 610
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L +A + + G+ P L A+ + +L+ M++N + P+
Sbjct: 611 LSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDIEAFSILQYMKENDVKPD 665
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 119/266 (44%), Gaps = 12/266 (4%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
+W + EV R M+ D Y+ +I GK AM + M + G PD +
Sbjct: 436 EWQKTFEVLREMKNSN-VKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTW 494
Query: 184 NALITAHLHT--RDKAKALAKALGYFQKMKGMERCK-PNIVTYNILLRACAQARNVDQVN 240
N LI H D+A L F++M+ ER P TYNI++ + + D+V
Sbjct: 495 NTLIDCHRKHGYHDRAAEL------FEEMQ--ERGYLPCPTTYNIMINSLGEQEKWDEVK 546
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
L ++ L P++ TY ++D YG +G + L MKS KP +N LI+++
Sbjct: 547 ILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAF 606
Query: 301 GKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
+R ++ ++ ++ +P+L NS+I +G+ R +A + Q M P
Sbjct: 607 AQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDIEAFSILQYMKENDVKPDV 666
Query: 361 ITYECIITMYGYCDNVSRAREIFDEL 386
+TY ++ D + +++E+
Sbjct: 667 VTYTTLMKALIRVDKFDKVPAVYEEM 692
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/349 (20%), Positives = 143/349 (40%), Gaps = 30/349 (8%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKAL- 204
++ L+ +KG + A + SEM SG PD Y L+ A+ + + A+ L K +
Sbjct: 354 FNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQME 413
Query: 205 ---------------------GYFQKMKGMER------CKPNIVTYNILLRACAQARNVD 237
G +QK + R KP+ YN+++ + +D
Sbjct: 414 ARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLD 473
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ + + PD+ T+N ++D + K+G + M+ P T+N++I
Sbjct: 474 HAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMI 533
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+S G+++ +D+++ + + P + T+ +++ YG + A + M +
Sbjct: 534 NSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLK 593
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
PS Y +I + +A + + G + LN+++ A+ + EA +
Sbjct: 594 PSATMYNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDIEAFSI 653
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
+ V PD TY L KA + + + V + + M +G P+ +
Sbjct: 654 LQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGK 702
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 136/336 (40%), Gaps = 12/336 (3%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
V W+Q+ + +YS LI +G+ + A L + + P YNALI A
Sbjct: 165 VVSWLQRHNLCFSYELLYSILIHALGRSEKLYEAFILSQKQTLT-----PLTYNALIGAC 219
Query: 191 LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD--QVNALFKELHE 248
D L KAL +M+ + + + + Y++++++ + +D + L++E+
Sbjct: 220 ARNND----LEKALNLMSRMR-QDGFQSDFINYSLIIQSLTRTNKIDIPLLQKLYEEIES 274
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
+ D N ++ + K G LS ++++ P TF +I + G ++
Sbjct: 275 DKIELDGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEE 334
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
E +F+ + KP + FN+++ Y + +AE + +M +P TY ++
Sbjct: 335 AEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVD 394
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
Y AR + ++ + +L +Y G + + N V P
Sbjct: 395 AYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKP 454
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
D Y ++ + K N + + RM GI P+
Sbjct: 455 DRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPD 490
>gi|410110115|gb|AFV61137.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
hederifolia]
Length = 364
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 5/255 (1%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ +FS ++ SG PD YNA+I KAK +A +MK PN +Y
Sbjct: 6 AISIFSRLKRSGFTPDLVAYNAMINVF----GKAKLFREARSLISEMK-TAGVMPNTTSY 60
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
+ LL + + + ++F E+ E D+ T N ++D YG+ GM KE + + M+
Sbjct: 61 STLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 120
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+P+++++N L+ YG + F + +F+ + + + T+NSM++ YGK K
Sbjct: 121 MGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKSIEQNVVTYNSMMMIYGKTLEHEK 180
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A + Q+M + P+ ITY II+++G + RA +F +L G ++ M+
Sbjct: 181 ANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIV 240
Query: 404 AYCMNGLPTEADLLF 418
AY GL A L
Sbjct: 241 AYERAGLVAHAKRLL 255
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 130/263 (49%), Gaps = 1/263 (0%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+KA+ F ++K P++V YN ++ +A+ + +L E+ + + P+ +Y+
Sbjct: 4 SKAISIFSRLK-RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYST 62
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ Y +N E SV S M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 63 LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 122
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P + ++N+++ YG A L G+A ++F+ M + +TY ++ +YG +A
Sbjct: 123 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKSIEQNVVTYNSMMMIYGKTLEHEKAN 182
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ E+ G + T + ++ + G A +LF+ + GV D ++ + AY
Sbjct: 183 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY 242
Query: 441 TKANMKELVQKLLKRMEQNGIVP 463
+A + ++LL +++ +P
Sbjct: 243 ERAGLVAHAKRLLHELKRPDNIP 265
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 147/358 (41%), Gaps = 42/358 (11%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L SEM+ +G P+ + Y+ L+T ++
Sbjct: 14 KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVEN--- 70
Query: 197 AKALAKALGYFQKMK--------------------------------GMER--CKPNIVT 222
K +AL F +M+ GM + +PN+V+
Sbjct: 71 -KKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 129
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
YN LLR A + LF+ + + ++ TYN +M YGK ++ +++ M+
Sbjct: 130 YNTLLRVYGDAELFGEAIHLFRLMQRKSIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQ 189
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
S +P+ IT++ +I +GK D+ +F+ L S + F +MI+ Y +A L
Sbjct: 190 SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVA 249
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
A+ + ++ P I + I + + A +F + G+ ++ M+
Sbjct: 250 HAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMI 305
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+ +F+ +G PDS ++ AY K + + M++ G
Sbjct: 306 HLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEVG 363
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%)
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+ K +F L S P L +N+MI +GKA+L +A + +M P+ +Y
Sbjct: 3 YSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYST 62
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
++TMY A +F E+ ++ + ++T N M++ Y G+ EAD LF MG
Sbjct: 63 LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 122
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ P+ +Y L + Y A + L + M++ I N
Sbjct: 123 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKSIEQN 161
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 86/189 (45%)
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
S+ SR+K + PD++ +N +I+ +GK + F + + + + P ++++++ Y
Sbjct: 8 SIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMY 67
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
+ + +A VF +M +K T +I +YG A ++F + K+G + V
Sbjct: 68 VENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 127
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+ N +L Y L EA LF + + TY + Y K E L++
Sbjct: 128 VSYNTLLRVYGDAELFGEAIHLFRLMQRKSIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 187
Query: 456 MEQNGIVPN 464
M+ GI PN
Sbjct: 188 MQSRGIEPN 196
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 140/307 (45%), Gaps = 5/307 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS LI V+ GQ LA ++M GC P+ ++L+ AL +
Sbjct: 284 YSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDL---WN 340
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
Q ++G +PN+V YN L++ N+ + ++F + E +P+I TY +++ + K
Sbjct: 341 QMIRGFGL-QPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAK 399
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + + ++M ++ C P+++ + ++++ + F + E + + + P++PT
Sbjct: 400 RGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPT 459
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAM-KYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
FN+ I A AE VF++M + P+ +TY ++ + + A + E+
Sbjct: 460 FNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREI 519
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
G + ST N +L C GLP A L G +PD T ++ AY K
Sbjct: 520 FMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKA 579
Query: 447 ELVQKLL 453
E ++L
Sbjct: 580 ERAAQML 586
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 145/336 (43%), Gaps = 16/336 (4%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA- 189
V+R M K+ + + Y+ L+ + K + A L EM N GC PD Y +I++
Sbjct: 168 VYRDM-KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSM 226
Query: 190 -HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
+ + + LA ER +P + YN L+ + + L +E+ E
Sbjct: 227 CEVGLVKEGRELA------------ERFEPVVSVYNALINGLCKEHDYKGAFELMREMVE 274
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS-YGKRQAFD 307
++P++ +Y+ +++ +G I+ S L++M C P+I T + L+ + + FD
Sbjct: 275 KGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFD 334
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
++ + + +P + +N+++ + KA VF M + +P+ TY +I
Sbjct: 335 ALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLI 394
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
+ ++ A I++++ G V M+EA C + EA+ L E
Sbjct: 395 NGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCA 454
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
P T+ K A + +K+ ++MEQ P
Sbjct: 455 PSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP 490
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 145/350 (41%), Gaps = 20/350 (5%)
Query: 94 EPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIA 153
P + TL+ VK CFL D W Q + R Q +A Y+ L+
Sbjct: 313 HPNIYTLSSLVK-----GCFLRGTTFDALDLWNQ---MIRGFGLQPNVVA----YNTLVQ 360
Query: 154 VMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGM 213
G A+ +FS M GC P+ Y +LI K +L A+ + KM
Sbjct: 361 GFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGF----AKRGSLDGAVYIWNKML-T 415
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
C PN+V Y ++ A + + +L + + + AP + T+N + G +
Sbjct: 416 SGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDW 475
Query: 274 MESVLSRM-KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
E V +M + ++C P+I+T+N L+D K ++ + + + + + T+N+++
Sbjct: 476 AEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLL 535
Query: 333 INYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKD 392
A L G A + KM +P IT II Y RA ++ D +S +
Sbjct: 536 HGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRK 595
Query: 393 MK--VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ V + ++ C + + +L E + G+ P +T+ +L +
Sbjct: 596 WRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/356 (19%), Positives = 152/356 (42%), Gaps = 32/356 (8%)
Query: 131 VFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAH 190
+ + M+ Q ++ ++ ++ +I+V + G A+ +F ++ GC P +YN
Sbjct: 98 LLQQMKLQGFHCSED-LFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYN------ 150
Query: 191 LHTRDKAKALAKALGYFQKMKGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
H D + + + M+R +PN+ TYN+LL+A + VD L E+
Sbjct: 151 -HVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSN 209
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
PD +Y V+ + + G++KE + R + P + +N LI+ K +
Sbjct: 210 KGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSVYNALINGLCKEHDYKG 264
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM--------KYTPSF 360
++ + ++ P + +++++I + G+ E F +T M YT S
Sbjct: 265 AFELMREMVEKGISPNVISYSTLINVLCNS---GQIELAFSFLTQMLKRGCHPNIYTLSS 321
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSK-LGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
+ C + + A ++++++ + G V N +++ +C +G +A +F
Sbjct: 322 LVKGCFLRGTTF-----DALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFS 376
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ +G +P+ TY L + K + + +M +G PN + +E
Sbjct: 377 HMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEAL 432
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/343 (19%), Positives = 149/343 (43%), Gaps = 17/343 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA-KALGY 206
+ +I + GQ +L +M+ G ++ ++I+ + + LA +A+
Sbjct: 79 FEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVY-----RQVGLAERAVEM 133
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F ++K C P++ YN +L + + +++++ P+++TYN ++ A
Sbjct: 134 FYRIKEFG-CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALC 192
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
KN + + +L M + C PD +++ +I S + + + + + +P +
Sbjct: 193 KNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE-----LAERFEPVVS 247
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
+N++I K A + ++M +P+ I+Y +I + + A ++
Sbjct: 248 VYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQM 307
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEA-DLLFENSHNMGVTPDSSTYKLLYKAY-TKAN 444
K G + TL+++++ + G +A DL + G+ P+ Y L + + + N
Sbjct: 308 LKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGN 367
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSA 487
+ + V + ME+ G PN R + + F+ GS G+
Sbjct: 368 IVKAVS-VFSHMEEIGCSPNIRTYGSLINGFAKR--GSLDGAV 407
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 135/319 (42%), Gaps = 40/319 (12%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++ L+ + K+G+ + A + + M G P YN L+ + + KA
Sbjct: 262 DAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKA-KHV 320
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L +M R PN +YNI++ + + VD+ LF E+ +AP TYN ++D
Sbjct: 321 LSIISRM----RVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLID 376
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K G I ++ M +N DI+T+N LID + K Q DK + K + +P
Sbjct: 377 GLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQP 436
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T+N +I K + A+++F
Sbjct: 437 NMCTYNILIDGLCKG-----------------------------------GQLKNAQDVF 461
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+L G ++ T N M+ C GL EA++L + G+ PD+ TY+ + +A
Sbjct: 462 QDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHK 521
Query: 444 NMKELVQKLLKRMEQNGIV 462
+ E QKLL+ M G+V
Sbjct: 522 DENEKAQKLLREMVIKGVV 540
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 140/310 (45%), Gaps = 9/310 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + K GQTR A+ + ++ + +Y+ +I K K + A G +
Sbjct: 161 YGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLC----KDKLVTDAYGLY 216
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M ++R P +VT++ L+ LF E+ + PD YT+N ++DA K
Sbjct: 217 SEMI-VKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCK 275
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G IKE ++V++ M +P ++T+N L+D Y K + V + + P +
Sbjct: 276 EGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRS 335
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N MI + K ++ +A +F +M P +TY +I + A E+ DE+
Sbjct: 336 YNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMH 395
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA---- 443
+ T N++++ +C N +A L + G+ P+ TY +L K
Sbjct: 396 NNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLK 455
Query: 444 NMKELVQKLL 453
N +++ Q LL
Sbjct: 456 NAQDVFQDLL 465
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 121/262 (46%), Gaps = 1/262 (0%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
AL ++++G + N+V Y+ ++ + + V L+ E+ + P + T++ ++
Sbjct: 177 ALQVLRQIEG-KLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLI 235
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+ G K+ + + M PD TFN+L+D+ K + + V +M +
Sbjct: 236 YGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVE 295
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
PT+ T+N+++ Y GKA++V ++ M+ P+ +Y +I + V A +
Sbjct: 296 PTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCL 355
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
F E+ G T N++++ C G A L + HN + D TY L + K
Sbjct: 356 FHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCK 415
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
+ L+K+++++GI PN
Sbjct: 416 NQHVDKAIALVKKIKEHGIQPN 437
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 116/284 (40%), Gaps = 27/284 (9%)
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARN-VDQVNALFKELHESILAPDIYTYNGVMDAY 265
F +M+ + R P+IV +N +L + +N V +L ++ + PD++T + +++ Y
Sbjct: 54 FNRMRQI-RQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCY 112
Query: 266 GKNGMIKEMESVLSR-MKSNQC--------------------KPDIITFNLLIDSYGKRQ 304
G + SV ++ +K C + +T+ +LI+ K
Sbjct: 113 CHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMG 172
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
QV + + + ++++I K +L A ++ +M + P+ +T+
Sbjct: 173 QTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFS 232
Query: 365 CIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
+I YG+C A +F+E+ + T N +++A C G EA +
Sbjct: 233 SLI--YGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMM 290
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
GV P TY L Y N + +L + + + PN R
Sbjct: 291 KEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSR 334
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 146/316 (46%), Gaps = 10/316 (3%)
Query: 145 TGI-YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
+GI Y LI + K G+TR A+ L + RP+ +Y+ +I K + +A
Sbjct: 162 SGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLC----KDTLVDEA 217
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ +M G + P++VTY+IL+ +++ L E+ + PDIYTY ++D
Sbjct: 218 YDLYTEMVG-KGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVD 276
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
A K G +KE E+VL+ M D++ ++ L+D Y + ++VF ++ P
Sbjct: 277 ALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTP 336
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ ++ MI K + +A +F+++ P +TY +I +S ++F
Sbjct: 337 DVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLF 396
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
DE+ G+ V T N +++A C NG A LF + + P+ T+ +L K
Sbjct: 397 DEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKV 456
Query: 444 ----NMKELVQKLLKR 455
N E Q LL +
Sbjct: 457 GRLKNALEFFQDLLTK 472
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 151/363 (41%), Gaps = 45/363 (12%)
Query: 138 QRWYI-ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
+RW I + IYS +I + K A L++EM G PD Y+ L++
Sbjct: 190 ERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFC----I 245
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQAR----------------NVDQV 239
L +A+ +M +E P+I TY IL+ A C + + N+D V
Sbjct: 246 VGQLNRAIDLLNEMV-LENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVV 304
Query: 240 ----------------NA--LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
NA +F + + + PD++ Y+ +++ K + E ++ +
Sbjct: 305 VYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEI 364
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
PD +T+ LID K + +F ++ + P + T+N++I K
Sbjct: 365 HQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHL 424
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLN 399
+A +F KM P+ T+ I + G C + A E F +L G + V T
Sbjct: 425 DRAIALFNKMKDQAIRPNVYTFT--ILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYT 482
Query: 400 AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
M+ C GL EA L + G D+ T++++ +A+ + + +KL++ M
Sbjct: 483 VMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIAR 542
Query: 460 GIV 462
G++
Sbjct: 543 GLL 545
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 111/257 (43%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+PN+V Y++++ + VD+ L+ E+ ++PD+ TY+ ++ + G +
Sbjct: 195 RPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAID 254
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+L+ M PDI T+ +L+D+ K + E V ++ + + +++++ Y
Sbjct: 255 LLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYC 314
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
A+ VF MT M TP Y +I V A +F+E+ +
Sbjct: 315 LVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTV 374
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
T ++++ C +G + LF+ + G PD TY L A K + L +M
Sbjct: 375 TYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKM 434
Query: 457 EQNGIVPNKRFFLEALE 473
+ I PN F L+
Sbjct: 435 KDQAIRPNVYTFTILLD 451
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 124/306 (40%), Gaps = 5/306 (1%)
Query: 159 GQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKP 218
GQ LA S++ G +P+ N L+ L K K +AL + K+ + +
Sbjct: 107 GQVVLAFSGVSKILKLGYQPNTITLNTLMKG-LCLEGKVK---EALRFHDKVLA-QGFRL 161
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
+ ++Y IL+ + L + + + P++ Y+ ++D K+ ++ E +
Sbjct: 162 SGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLY 221
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
+ M PD++T+++L+ + ++ + ++ P + T+ ++ K
Sbjct: 222 TEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKE 281
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
+AE V M + Y ++ Y + V+ A+ +F ++++G V
Sbjct: 282 GKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCY 341
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
+ M+ C EA LFE H + PD+ TY L K+ V L M
Sbjct: 342 SIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLD 401
Query: 459 NGIVPN 464
G P+
Sbjct: 402 RGQPPD 407
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/324 (19%), Positives = 126/324 (38%), Gaps = 23/324 (7%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA-----LGYFQKMKGMERCKP 218
A+ L+ +M S PD N +I H A + LGY +P
Sbjct: 77 AISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGY----------QP 126
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDI----YTYNGVMDAYGKNGMIKEM 274
N +T N L++ V + AL H+ +LA +Y +++ K G +
Sbjct: 127 NTITLNTLMKGLCLEGKVKE--AL--RFHDKVLAQGFRLSGISYGILINGVCKIGETRAA 182
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
+L R++ +P+++ ++++ID K D+ ++ ++ P + T++ ++
Sbjct: 183 IRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSG 242
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
+ +A + +M P TY ++ V A + + K ++
Sbjct: 243 FCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLD 302
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
V + +++ YC+ A +F MGVTPD Y ++ K + L +
Sbjct: 303 VVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFE 362
Query: 455 RMEQNGIVPNKRFFLEALETFSSS 478
+ Q +VP+ + ++ S
Sbjct: 363 EIHQKNMVPDTVTYTSLIDCLCKS 386
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/282 (19%), Positives = 115/282 (40%), Gaps = 35/282 (12%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P+ +N +L + + +L+K++ S + PD +T N +++ + G + S
Sbjct: 56 PHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSG 115
Query: 278 LSRMKSNQCKPDIITFNLLIDSY---GK-RQAF---DK-MEQVFK--------------- 314
+S++ +P+ IT N L+ GK ++A DK + Q F+
Sbjct: 116 VSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCK 175
Query: 315 --------SLMHSKE----KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
L+ E +P + ++ +I K L +A ++ +M +P +T
Sbjct: 176 IGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVT 235
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
Y +++ + ++RA ++ +E+ + + T +++A C G EA+ +
Sbjct: 236 YSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMV 295
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
V D Y L Y N +++ M Q G+ P+
Sbjct: 296 KACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPD 337
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 65/162 (40%), Gaps = 1/162 (0%)
Query: 303 RQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
A D + Q F + H P FN ++I+ + A ++++M + P + T
Sbjct: 37 HNADDAVSQ-FNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFT 95
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
II + + V A ++ KLG TLN +++ C+ G EA +
Sbjct: 96 LNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVL 155
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G +Y +L K +LL+R+E+ I PN
Sbjct: 156 AQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPN 197
>gi|302785283|ref|XP_002974413.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
gi|300158011|gb|EFJ24635.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
Length = 447
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 168/365 (46%), Gaps = 47/365 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y L+ K G+ + A+ L EM+++G RP+ ++ +I L T A +++AL +F
Sbjct: 33 YGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRG-LCT---AGKVSQALLHF 88
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+++ E C PN+ TY+IL+ A ++ + L E+ + +P++ TYN ++D + K
Sbjct: 89 RRIG--EDCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRK 146
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ E+ +L M C+ D+IT+ +++D + K + D+ ++ +L EK + T
Sbjct: 147 LERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNAL----EKRNVVT 202
Query: 328 FNSMIINYGKARLQGKAEYV--FQKMTAMKYTPSFI-----------------TYECIIT 368
+NS+ A E + +KM P+ + Y+ +++
Sbjct: 203 YNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLS 262
Query: 369 MYGY-C--DNVS---------RAREIFDELSKLGK------DMKVSTLNAMLEAYCMNGL 410
MY C D+VS A +D L LG+ + T+N ++ +C G
Sbjct: 263 MYSQGCKTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGD 322
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
EA LF++ G P + TY L A+ KA + KLL +M Q PN +
Sbjct: 323 LHEAHQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNS 382
Query: 471 ALETF 475
+++F
Sbjct: 383 IIKSF 387
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 133/319 (41%), Gaps = 32/319 (10%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA--HLHTRDKAKALAK--- 202
YS L+ + K GQ A L +EM GC P+ YNALI L D+ L K
Sbjct: 102 YSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMS 161
Query: 203 -------------ALGYFQKMKGMERC--------KPNIVTYNILLRACAQA---RNVDQ 238
L F K ++ K N+VTYN L A + A R +
Sbjct: 162 QRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKRNVVTYNSLFTALSTAEGDRTTEA 221
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
++ L K + E P+ Y V+ KN + E VL M S CK D +++ +L+
Sbjct: 222 LSLLEKMIQEGT-RPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVV 280
Query: 299 SYGKR-QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
++ + +D +E + ++ S T N +I + KA +A +F+ M
Sbjct: 281 AFASAGRTYDSLE-LLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMCQRGSI 339
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
PS +TY +I + A ++ ++ + V T N++++++C EA +
Sbjct: 340 PSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGI 399
Query: 418 FENSHNMGVTPDSSTYKLL 436
F+ + G PD +Y L
Sbjct: 400 FQMMVDSGCFPDRVSYTTL 418
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 14/194 (7%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L K+ + + +V M Q D Y L+ G+T ++ L M SG
Sbjct: 247 LCKNSRLDEAYQVLLSMYSQGCKTDDVS-YKILVVAFASAGRTYDSLELLGRMLGSGYIL 305
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCK----PNIVTYNILLRACAQAR 234
D N +I H KA L +A F+ M C+ P+ VTYN L+ A +A+
Sbjct: 306 DTKTMNVVI----HKFCKAGDLHEAHQLFKSM-----CQRGSIPSNVTYNTLIGAFCKAQ 356
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
D L ++ ++ P++ TYN ++ ++ + +E + M + C PD +++
Sbjct: 357 QPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDSGCFPDRVSYT 416
Query: 295 LLIDSYGKRQAFDK 308
L S +D+
Sbjct: 417 TLKISKNDAAIYDQ 430
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL---HTRDKAKALAKAL 204
Y ++ ++ K + A + M + GC+ D Y L+ A T D + L + L
Sbjct: 240 YRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFASAGRTYDSLELLGRML 299
Query: 205 G--YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
G Y K M N+++ +A ++ + + LFK + + P TYN ++
Sbjct: 300 GSGYILDTKTM----------NVVIHKFCKAGDLHEAHQLFKSMCQRGSIPSNVTYNTLI 349
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
A+ K +L +M KP++IT+N +I S+ + Q ++ +F+ ++ S
Sbjct: 350 GAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDSGCF 409
Query: 323 PTLPTFNSMIINYGKARL 340
P ++ ++ I+ A +
Sbjct: 410 PDRVSYTTLKISKNDAAI 427
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 167/386 (43%), Gaps = 41/386 (10%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L +L +S++ + + R M+K+ + + Y+ LI +G+ +A L +EM +
Sbjct: 268 MLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV-TYNTLINGFSNEGKVLIASQLLNEMLS 326
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G P+ +NALI H+ + +AL + Y + KG+ P+ V+Y +LL +
Sbjct: 327 FGLSPNHVTFNALIDGHISEGNFKEALK--MFYMMEAKGL---TPSEVSYGVLLDGLCKN 381
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
D + + + + TY G++D KNG + E +L+ M + PDI+T+
Sbjct: 382 AEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTY 441
Query: 294 NLLIDSYGKRQAFDKMEQ-----------------------------------VFKSLMH 318
+ LI+ + K F ++ ++++++
Sbjct: 442 SALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMIL 501
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
TFN ++ + KA +AE + MT+ P+ ++++C+I YG +
Sbjct: 502 EGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLK 561
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A +FDE++K+G T ++L+ C G EA+ ++ H + D+ Y L
Sbjct: 562 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 621
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPN 464
A K+ L M Q I+P+
Sbjct: 622 AMCKSGNLAKAVSLFGEMVQRSILPD 647
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 168/402 (41%), Gaps = 24/402 (5%)
Query: 95 PLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAV 154
P V T N + V+ +E F KS +Q +E + Y Y+ ++
Sbjct: 191 PDVATFNILINVLCAEGSF------EKSSYLMQKME-------KSGYAPTIVTYNTVLHW 237
Query: 155 MGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME 214
KKG+ + A+ L M++ G D YN LI H ++ +AK + M+
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLI----HDLCRSNRIAKGYLLLRDMRK-R 292
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
PN VTYN L+ + V + L E+ L+P+ T+N ++D + G KE
Sbjct: 293 MIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEA 352
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
+ M++ P +++ +L+D K FD + + + T+ MI
Sbjct: 353 LKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDG 412
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR---AREIFDELSKLGK 391
K +A + +M+ P +TY +I G+C V R A+EI + ++G
Sbjct: 413 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALIN--GFC-KVGRFKTAKEIVCRIYRVGL 469
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
+ ++ C G EA ++E G T D T+ +L + KA ++
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 529
Query: 452 LLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTR 493
++ M +GI+PN F + + +S G ++ S ++T+
Sbjct: 530 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 571
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 131/290 (45%), Gaps = 5/290 (1%)
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
C +PSVY+ LI +L + + +L F+ M G+ P++ T N +L + ++
Sbjct: 119 CNSNPSVYDILIRVYL----REGMIQDSLEIFRLM-GLYGFNPSVYTCNAILGSVVKSGE 173
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
V + KE+ + + PD+ T+N +++ G ++ ++ +M+ + P I+T+N
Sbjct: 174 DVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNT 233
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK 355
++ Y K+ F ++ + + T+N +I + ++ K + + M
Sbjct: 234 VLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRM 293
Query: 356 YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
P+ +TY +I + V A ++ +E+ G T NA+++ + G EA
Sbjct: 294 IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEAL 353
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+F G+TP +Y +L K +L + RM++NG+ +
Sbjct: 354 KMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 403
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 134/299 (44%), Gaps = 20/299 (6%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
DT +Y+ L+ M K G A+ LF EM PD Y +LI+ K K +
Sbjct: 611 VDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR---KGKTVIA 667
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI-LAPDIYTYNGV 261
L + ++ + PN V Y + +A + F+E +++ PDI T N +
Sbjct: 668 IL-FAKEAEARGNVLPNKVMYTCFVDGMFKAGQW-KAGIYFREQMDNLGHTPDIVTTNAM 725
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+D Y + G I++ +L M + P++ T+N+L+ Y KR+ +++S++ +
Sbjct: 726 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 785
Query: 322 KPTLPTFNSMII-----NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN- 375
P T +S+++ N + L+ ++ + + +YT + + +C C N
Sbjct: 786 LPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKC-------CANG 838
Query: 376 -VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
++ A ++ ++ LG + T +AM+ N E+ ++ G++P+S Y
Sbjct: 839 EINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 897
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 153/394 (38%), Gaps = 46/394 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L L K+ K + E R M + +T + LI G G+ A +F EM
Sbjct: 513 VLVTSLCKAGKVAEAEEFMRCMTSD-GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 571
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G P Y +L+ K L +A + + + + + V YN LL A ++
Sbjct: 572 VGHHPTFFTYGSLLKGLC----KGGHLREAEKFLKSLHAVPA-AVDTVMYNTLLTAMCKS 626
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG-------MIKEMES---------- 276
N+ + +LF E+ + + PD YTY ++ + G KE E+
Sbjct: 627 GNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVM 686
Query: 277 ----VLSRMKSNQCK---------------PDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
V K+ Q K PDI+T N +ID Y + +K + +
Sbjct: 687 YTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMG 746
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN-- 375
+ P L T+N ++ Y K + + +++ + P +T C + G C++
Sbjct: 747 NQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT--CHSLVLGICESNM 804
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+ +I G ++ T N ++ C NG A L + ++G++ D T
Sbjct: 805 LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDA 864
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFL 469
+ + + + + +L M + GI P R ++
Sbjct: 865 MVSVLNRNHRFQESRMVLHEMSKQGISPESRKYI 898
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 131/332 (39%), Gaps = 18/332 (5%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D ++ L+ + K G+ A M + G P+ ++ LI + ++ + KA +
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS-- 564
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F +M + P TY LL+ + ++ + K LH A D YN ++
Sbjct: 565 --VFDEMTKVGH-HPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 621
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK- 322
A K+G + + S+ M PD T+ LI ++ + +++ +KE
Sbjct: 622 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG------KTVIAILFAKEAE 675
Query: 323 ------PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
P + + KA Y ++M + +TP +T +I Y +
Sbjct: 676 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 735
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+ ++ E+ ++T N +L Y + + LL+ + G+ PD T L
Sbjct: 736 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
++NM E+ K+LK G+ ++ F
Sbjct: 796 VLGICESNMLEIGLKILKAFICRGVEVDRYTF 827
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 109/320 (34%), Gaps = 83/320 (25%)
Query: 171 MRNSGCRPDPSVYNALITAHLHTR----DKAKALAKALG---------YFQKMKGMERCK 217
++ G D V IT H+ R D A+ + K L + M C
Sbjct: 61 VKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCN 120
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
N Y+IL+R + + +F+ + P +YT N ++ + K+G + S
Sbjct: 121 SNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 180
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L M + PD+ TFN+LI+ +F+
Sbjct: 181 LKEMLKRKICPDVATFNILINVLCAEGSFE------------------------------ 210
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
K+ Y+ QKM Y P+ +TY
Sbjct: 211 -----KSSYLMQKMEKSGYAPTIVTY---------------------------------- 231
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
N +L YC G A L ++ + GV D TY +L ++N LL+ M
Sbjct: 232 -NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR 290
Query: 458 QNGIVPNKRFFLEALETFSS 477
+ I PN+ + + FS+
Sbjct: 291 KRMIHPNEVTYNTLINGFSN 310
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 141/354 (39%), Gaps = 42/354 (11%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ + M K GQ + ++ +M N G PD NA+I + + + K
Sbjct: 686 MYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGY----SRMGKIEKTNDL 741
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+M G + PN+ TYNILL ++ ++V L++ + + + PD T + ++
Sbjct: 742 LPEM-GNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGIC 800
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLID---SYGKRQ-AFDKMEQVFKSLMHSKEK 322
++ M++ +L + D TFN+LI + G+ AFD + +V SL S +K
Sbjct: 801 ESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFD-LVKVMTSLGISLDK 859
Query: 323 PTLPTFNSMI---INYGKARL-------QG----------------------KAEYVFQK 350
T S++ + ++R+ QG A V ++
Sbjct: 860 DTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEE 919
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M A K P + ++ C A + + K+ +++ ++ C NG
Sbjct: 920 MIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGN 979
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA L N G+ D +Y +L L +L + M+ +G + N
Sbjct: 980 VIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLAN 1033
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 87/218 (39%)
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
T+N+L+ C ++ L K + ++ D T + ++ +N +E VL M
Sbjct: 826 TFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEM 885
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
P+ + LI+ + V + ++ K P ++M+ K
Sbjct: 886 SKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKA 945
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
+A + + M MK P+ ++ ++ + NV A E+ +S G + + + N +
Sbjct: 946 DEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVL 1005
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+ C G A L+E G +++TYK L +
Sbjct: 1006 ITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/434 (23%), Positives = 181/434 (41%), Gaps = 39/434 (8%)
Query: 60 CCVWTRPRSKRGRKSEELESKELV-----------RVLMRSFSDKEPLVRTLNKYVKVVR 108
C +W R + GR E + E + LMR K+ V+ +Y+ +
Sbjct: 249 CNIWIRGLCEDGRLEEAVALVERMGAYVAPDVVTYNTLMRGLC-KDSKVQEAAQYLGRMM 307
Query: 109 SEHCF-------LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQT 161
++ C + + KS + E+ + + ++ D Y LI + +G
Sbjct: 308 NQGCIPDDFTYNTIIDGYCKSGMLQEATELLKD-AVFKGFVPDRVTYCSLINGLCAEGDI 366
Query: 162 RLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK---ALGYFQKMKGM--ERC 216
A+ LF+E + +PD VYN+L+ K L + L Q M M E C
Sbjct: 367 ERALELFNEAQAKDLKPDLVVYNSLV----------KGLCRQGLILHALQVMNEMVEEGC 416
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
P+I TYNI++ + N+ + + PD++T+N ++D Y K +
Sbjct: 417 HPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQ 476
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
++ RM + PD+IT+N +++ K ++ + F+ ++ +P T+N +I N+
Sbjct: 477 LVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFC 536
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMK 394
K +A V +M P +++ +I +G+C N + A +F +L + G
Sbjct: 537 KINQLEEASGVIVRMCQDGLVPDAVSFNTLI--HGFCRNGDLDGAYLLFQKLDEKGYSAT 594
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
T N ++ AY A+ +F + G PD TY++L KA + L
Sbjct: 595 ADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLA 654
Query: 455 RMEQNGIVPNKRFF 468
M G VP+ F
Sbjct: 655 EMISKGFVPSMATF 668
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 150/357 (42%), Gaps = 31/357 (8%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
LE+F Q + D +Y+ L+ + ++G A+ + +EM GC PD YN +I
Sbjct: 370 LELFNEAQAKDLK-PDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIIN 428
Query: 189 AHL---HTRDKAKALAKAL----------------GYFQKMKG------MER-----CKP 218
+ D A + A+ GY +++K +ER P
Sbjct: 429 GLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAP 488
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
+++TYN +L +A +VN F+E+ P+ TYN +++ + K ++E V+
Sbjct: 489 DVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVI 548
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
RM + PD ++FN LI + + D +F+ L T TFN +I Y
Sbjct: 549 VRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSK 608
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
AE +F +M + Y P TY ++ NV RA E+ G ++T
Sbjct: 609 LNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATF 668
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
ML MN +EA + MGV P+ L A K LV++L+K+
Sbjct: 669 GRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVVDTILSTDKKEIAAPKILVEELMKK 725
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 150/402 (37%), Gaps = 64/402 (15%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+R A Y ++ + G A LF EM PD + +N ++ A D
Sbjct: 169 ERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVM 228
Query: 198 KA---LAKAL---------------------GYFQKMKGM-ER----CKPNIVTYNILLR 228
++ LAK L G ++ + ER P++VTYN L+R
Sbjct: 229 ESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAYVAPDVVTYNTLMR 288
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
+ V + + PD +TYN ++D Y K+GM++E +L P
Sbjct: 289 GLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVP 348
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
D +T+ LI+ ++ ++F KP L +NS++ + L A V
Sbjct: 349 DRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVM 408
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC-- 406
+M P TY II N+S A + ++ G V T N +++ YC
Sbjct: 409 NEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKR 468
Query: 407 ----------------------------MNGL-----PTEADLLFENSHNMGVTPDSSTY 433
+NGL E + FE G P++ TY
Sbjct: 469 LKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITY 528
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+L + + K N E ++ RM Q+G+VP+ F + F
Sbjct: 529 NILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGF 570
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 152/370 (41%), Gaps = 57/370 (15%)
Query: 159 GQTRLAMWLFSEMRNSGCRPDPSVYNALIT---AHLHTRDKAKALAKALGYFQKMKGMER 215
G+ +A+ L + GC P+ Y ++ AH H + A F +M G +
Sbjct: 155 GRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYN-------ARHLFDEMLGRD- 206
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKE-------------------------LHESI 250
P++ T+N +L A Q +V + AL + L E++
Sbjct: 207 VFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAV 266
Query: 251 ---------LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
+APD+ TYN +M K+ ++E L RM + C PD T+N +ID Y
Sbjct: 267 ALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYC 326
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
K + ++ K + P T+ S+I +A +F + A P +
Sbjct: 327 KSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLV 386
Query: 362 TYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
Y ++ G C + A ++ +E+ + G + T N ++ C G ++A ++
Sbjct: 387 VYNSLVK--GLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMN 444
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSL 479
++ G PD T+ L Y K + +L++RM GI P+ + T++S L
Sbjct: 445 DAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPD-------VITYNSVL 497
Query: 480 AG-SQSGSAK 488
G ++G AK
Sbjct: 498 NGLCKAGKAK 507
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 130/332 (39%), Gaps = 44/332 (13%)
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQV 239
P L A + +A L A+ F++M + C P YN ++ A A DQ
Sbjct: 67 PDSLQPLYVASIQAYARAGRLRAAVDAFERMD-LFACPPAAPAYNAIMDALVNAAYHDQA 125
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI-- 297
+ ++ + + +APD T+ + ++ G +L + C + ++
Sbjct: 126 HKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRG 185
Query: 298 -----DSYGKRQAFDKM--EQVFKSLMHSKEKPTLPTFNSM---IINYGKARLQGK--AE 345
Y R FD+M VF P + TFN++ + G G A+
Sbjct: 186 LYAHGHGYNARHLFDEMLGRDVF---------PDVATFNNVLHALCQKGDVMESGALLAK 236
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM--KVSTLNAMLE 403
+ + M+A K+T C I + G C++ R E + ++G + V T N ++
Sbjct: 237 VLKRGMSANKFT-------CNIWIRGLCED-GRLEEAVALVERMGAYVAPDVVTYNTLMR 288
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
C + EA N G PD TY + Y K+ M + +LLK G VP
Sbjct: 289 GLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVP 348
Query: 464 NKRFFLEALETFSSSLAGSQSGSAKTDLTRSL 495
++ T+ S + G A+ D+ R+L
Sbjct: 349 DR-------VTYCSLINGL---CAEGDIERAL 370
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 106/306 (34%), Gaps = 59/306 (19%)
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT--YNGVMDAYGKNGMIKEMESV 277
I Y L+R A +D V+A S LAPD Y + AY + G ++
Sbjct: 35 IPAYRALIRELVSAGRLDDVDAALASA-RSHLAPDSLQPLYVASIQAYARAGRLRAAVDA 93
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
RM C P +N ++D+ D+ +V+ ++ + P T + ++
Sbjct: 94 FERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFC- 152
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS---------RAREIFDELSK 388
L G+ A++ S C YC V AR +FDE+
Sbjct: 153 --LTGRPH------VALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEM-- 202
Query: 389 LGKDM--KVSTLNAMLEAYCMNGLPTEADLLFENSHNMG--------------------- 425
LG+D+ V+T N +L A C G E+ L G
Sbjct: 203 LGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRL 262
Query: 426 -------------VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
V PD TY L + K + + + L RM G +P+ + +
Sbjct: 263 EEAVALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTII 322
Query: 473 ETFSSS 478
+ + S
Sbjct: 323 DGYCKS 328
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 148/331 (44%), Gaps = 12/331 (3%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
L AV+ K ++A +F EM SG P+ YN LI A L L +F +M
Sbjct: 174 LDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFC----TAGNLEMGLXFFGEM 229
Query: 211 KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
+ C PN+VTYN ++ A + R + + L + + L P++ +YN V++ + G
Sbjct: 230 E-RNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQ 288
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
+KE +L M + PD +TFN LI+ Y F + + ++ + P + T+ +
Sbjct: 289 MKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTT 348
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
+I + KA +A +M P+ TY +I + + +A +I E+ + G
Sbjct: 349 LINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENG 408
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
+ T NA++ +C+ G +A L + G PD +Y + + + E
Sbjct: 409 FTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAF 468
Query: 451 KLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
+L M GI P+ + T+SS + G
Sbjct: 469 QLKVEMVAKGISPD-------VATYSSLIQG 492
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 158/385 (41%), Gaps = 56/385 (14%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E+ M K+R Y+ D ++ LI G A+ L +EM +G P+ Y LI +
Sbjct: 294 EILEEMSKRR-YVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINS 352
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
KA L +A+ + +M+ PN TY L+ +Q + Q + KE+ E+
Sbjct: 353 MC----KAGNLNRAMEFLDQMRD-RGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVEN 407
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
P I TYN +++ + G +++ +L M PD+++++ +I + + Q +K
Sbjct: 408 GFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKA 467
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
Q+ ++ P + T++S+I K R G+ +FQ+M ++ P +TY +I
Sbjct: 468 FQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINA 527
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLN------------------------------ 399
Y ++ +A + DE+ + G + T N
Sbjct: 528 YCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPN 587
Query: 400 --------------------AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
A+++ +CM GL EAD + E+ G + Y ++
Sbjct: 588 EITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHG 647
Query: 440 YTKANMKELVQKLLKRMEQNGIVPN 464
++K E L K M +G P+
Sbjct: 648 HSKVGNIEKAYNLYKEMLHSGFAPH 672
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 135/301 (44%), Gaps = 4/301 (1%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ + + ++ G P YNA++ A + T+ K A G F++M PN+ TY
Sbjct: 151 ALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKI---AEGIFKEMVE-SGVSPNVYTY 206
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
NIL+R A N++ F E+ + P++ TYN ++DAY K I E +L M
Sbjct: 207 NILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMAL 266
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
P++I++N++I+ + + ++ + + + P TFN++I Y +
Sbjct: 267 KGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQ 326
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A + +M +P+ +TY +I N++RA E D++ G T +++
Sbjct: 327 ALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLID 386
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
+ G +A + + G TP TY L + E LL+ M + G +P
Sbjct: 387 GFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIP 446
Query: 464 N 464
+
Sbjct: 447 D 447
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 147/349 (42%), Gaps = 34/349 (9%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL------- 200
Y+ LI G + + F EM +GC P+ YN +I A+ R +A
Sbjct: 206 YNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMA 265
Query: 201 -----AKALGYFQKMKGM------------------ERCKPNIVTYNILLRACAQARNVD 237
+ Y + G+ R P+ VT+N L+ N
Sbjct: 266 LKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFH 325
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
Q L E+ ++ L+P++ TY ++++ K G + L +M+ P+ T+ LI
Sbjct: 326 QALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLI 385
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
D + ++ + Q+ K ++ + PT+ T+N++I + A + Q+M +
Sbjct: 386 DGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFI 445
Query: 358 PSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
P ++Y II+ G+C N + +A ++ E+ G V+T +++++ C E
Sbjct: 446 PDVVSYSTIIS--GFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVC 503
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
LF+ ++G+ PD TY L AY + +L M Q G P+
Sbjct: 504 DLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPD 552
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 119/265 (44%), Gaps = 5/265 (1%)
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM-IKE 273
+CK + +++++++CA+ +++ ++ P + +YN ++DA + +K
Sbjct: 127 QCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKI 186
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
E + M + P++ T+N+LI + + F + + P + T+N++I
Sbjct: 187 AEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIID 246
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGK 391
Y K R G+A + + M P+ I+Y +I G C + EI +E+SK
Sbjct: 247 AYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVIN--GLCREGQMKETSEILEEMSKRRY 304
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
T N ++ YC G +A +L G++P+ TY L + KA +
Sbjct: 305 VPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAME 364
Query: 452 LLKRMEQNGIVPNKRFFLEALETFS 476
L +M G+ PN R + ++ FS
Sbjct: 365 FLDQMRDRGLHPNGRTYTTLIDGFS 389
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 143/311 (45%), Gaps = 22/311 (7%)
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQA 233
C D Y +LI K K L +AL + KM KG P++ TY ++ A
Sbjct: 7 CSADFVTYTSLIQGLC----KVKRLEQALIFLGKMVSKGFH---PDVYTYTAVIHALCVE 59
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ + +E+ L P++ TY ++D K G + E ++LS+M+ +C P +T+
Sbjct: 60 NRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTY 118
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N LI K + + + + +++S P + T+ ++I + K++ A VF+++ A
Sbjct: 119 NSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVA 178
Query: 354 MKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDM-KVSTLNAMLEAYCMNGL 410
+ P +TY C+I G C + A ++F + K G M T N+++ +C G
Sbjct: 179 RGFRPDVVTYSCLID--GLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGK 236
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
EA L E G +PD TY L + K + LL +M + G+ P+
Sbjct: 237 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPD------ 290
Query: 471 ALETFSSSLAG 481
+ TF+S + G
Sbjct: 291 -VVTFTSLMDG 300
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 153/348 (43%), Gaps = 26/348 (7%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG-CRPD 179
KS K L VF + R + D YS LI + K+G+ + A+ LF M SG C P+
Sbjct: 162 KSKKSDDALRVFEQLV-ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPN 220
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQV 239
YN+LI+ + + +A+ ++M P++VTY L+ + +D
Sbjct: 221 TVTYNSLISGFC----RMGKMDEAMNLLERMAETGS-SPDVVTYTTLMNGFCKLARLDDA 275
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
L ++ L PD+ T+ +MD + + + +L M+ C P + T+N ++D
Sbjct: 276 YDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDG 335
Query: 300 YGKRQAFDKMEQVFKSLMHSKE-KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
Y + +++E+ K ++ + P + +FN MI K +A + ++ + P
Sbjct: 336 YCRA---NQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNP 392
Query: 359 SFITYECIITMYGYC-----DNVSRA-REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ Y +I G C D R R++ +E L + STL + C G+
Sbjct: 393 DVVMYTTVID--GLCREKKVDEACRVYRKMLEEPGCLPNSITYSTL---VTGLCNAGMLD 447
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
A E G P+ TY LL A+ KAN E ++LL M Q G
Sbjct: 448 RARGYIEK----GCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 152/353 (43%), Gaps = 14/353 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + L K + Q L +F + + D Y+ +I + + + A EM N
Sbjct: 17 LIQGLCKVKRLEQAL-IFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANR 75
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
P+ Y LI K + +A+ KM+ ++C P VTYN L+ +A
Sbjct: 76 NLTPNVVTYTVLIDGLC----KGGRVDEAVALLSKMR--KKCVPTAVTYNSLISGLCKAE 129
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ L +E+ S PDI+TY ++ + K+ + V ++ + +PD++T++
Sbjct: 130 RASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYS 189
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKE-KPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
LID K + +F ++ S P T+NS+I + + +A + ++M
Sbjct: 190 CLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAE 249
Query: 354 MKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+P +TY + M G+C + A ++ +++++ G V T ++++ C
Sbjct: 250 TGSSPDVVTYTTL--MNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRL 307
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
++A + +P TY + Y +AN E +K + +E+ PN
Sbjct: 308 SDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPN 358
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 135/322 (41%), Gaps = 7/322 (2%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
AD Y+ LI + K + A+ +M + G PD Y A+I H L +
Sbjct: 9 ADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVI----HALCVENRLHE 64
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A + ++M PN+VTY +L+ + VD+ AL ++ + + P TYN ++
Sbjct: 65 ARKFLEEMAN-RNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLI 122
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
K E +L M + C PDI T+ LI + K + D +VF+ L+ +
Sbjct: 123 SGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFR 182
Query: 323 PTLPTFNSMIINYGK-ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P + T++ +I K RL+ + + + + P+ +TY +I+ + + A
Sbjct: 183 PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN 242
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ + +++ G V T ++ +C +A L G+TPD T+ L
Sbjct: 243 LLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLC 302
Query: 442 KANMKELVQKLLKRMEQNGIVP 463
+ N +L M + P
Sbjct: 303 RENRLSDAVHILGEMRRKSCSP 324
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 140/292 (47%), Gaps = 15/292 (5%)
Query: 175 GCRPDPSVYNALITAHLHTR--DKAKALAKAL--GYFQKMKGMERCKPNIVTYNILLRAC 230
GC P +NAL+ A + R A A +L G F + R PN+ TYNI+LR+
Sbjct: 115 GCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGR-----RIAPNLQTYNIMLRSL 169
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
++D+ LF L LAPD TY+ +M + KN + +L M S + +PD
Sbjct: 170 CVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDA 229
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSK-EKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
+ +N L+ + F+K +V++ L+ P L T+N M+ K + +A V++
Sbjct: 230 VCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWE 289
Query: 350 KMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
+M A + P ITY +I +G C +V A ++ E+ K G V N++L+ +C
Sbjct: 290 RMVANNHQPDMITYGTMI--HGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCH 347
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
G EA F +S ++ + ++Y ++ K M + L + +E++
Sbjct: 348 AGRVGEA-WKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKD 398
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 109/223 (48%), Gaps = 8/223 (3%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
IY+ LI + + A+ ++S+M + C P YN LI H KA+ +A +
Sbjct: 477 IYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLI----HGLCKAEKYLEASRF 532
Query: 207 FQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
++M +E+ C ++ TY L+R + + +D AL+ ++ + L D+ +N ++
Sbjct: 533 TREM--LEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGL 590
Query: 266 GKNGMIKEMESVLSRMKS-NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
G + E +LS MK N C P+++T+N L+D + + FDK ++ +++ + P
Sbjct: 591 CSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPD 650
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
+ ++N+ I + + +M A P+ IT+ ++
Sbjct: 651 IISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILV 693
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/328 (19%), Positives = 141/328 (42%), Gaps = 10/328 (3%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
R D YS L++ K + A++L EM + +PD YNAL+ +
Sbjct: 188 RGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGE--- 244
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
KA+ ++++ PN+ TYN++L + + +++ + + PD+ TY
Sbjct: 245 -FEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITY 303
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
++ ++ + V S M PD++ +N L+ + + + + S+
Sbjct: 304 GTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSV 363
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK-YTPSFITYECIITMYGYCDN-- 375
S + + ++N M+ + KA +++ + +P +T+ +I +G C+
Sbjct: 364 SGIR-NVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMI--HGLCEKGF 420
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+++ +I +E GK++ + ++M+ C +G +A L+E P+S Y
Sbjct: 421 ANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNA 480
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVP 463
L + +A+ ++ +M +N P
Sbjct: 481 LINGFCQASKFSDAIRVYSQMAENDCSP 508
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/362 (20%), Positives = 143/362 (39%), Gaps = 51/362 (14%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y +I + + A ++SEM +G PD +YN+L+ H A + +A
Sbjct: 299 DMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCH----AGRVGEA 354
Query: 204 LGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELH-ESILAPDI----- 255
++ M G+ N+ +YNI+L+ VD+ L++ L + L+PD+
Sbjct: 355 WKFWDSMSVSGIR----NVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFST 410
Query: 256 ------------------------------YTYNGVMDAYGKNGMIKEMESVLSRMKSNQ 285
++Y+ ++ K+G + + + ++ +
Sbjct: 411 MIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDS 470
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
KP+ +N LI+ + + F +V+ + + PT T+N++I KA +A
Sbjct: 471 FKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEAS 530
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLE 403
++M TY +I G C + + A +++++ G V N ++
Sbjct: 531 RFTREMLEKGCMLDVNTYGSLIR--GLCRDKKIDGALALWNQILDKGLQTDVVMHNILIH 588
Query: 404 AYCMNGLPTEA-DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
C G EA LL E P+ TY L + + + L + +NG+V
Sbjct: 589 GLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLV 648
Query: 463 PN 464
P+
Sbjct: 649 PD 650
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 125/291 (42%), Gaps = 16/291 (5%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
E G ++K LQ LE R K+ D YS +I+ + K G+ A+ L+ ++ +
Sbjct: 417 EKGFANKSLQILEEARTSGKE----LDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFK 472
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
P+ +YNALI +A + A+ + +M + C P +TYN L+ +A
Sbjct: 473 PNSHIYNALINGFC----QASKFSDAIRVYSQMAEND-CSPTTITYNTLIHGLCKAEKYL 527
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ + +E+ E D+ TY ++ ++ I ++ +++ + D++ N+LI
Sbjct: 528 EASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILI 587
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEK----PTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
D+ Q+ + KEK P + T+N+++ + + KA ++ +
Sbjct: 588 HGLCSAGKVDEASQLLSEM---KEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILE 644
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
P I+Y I C+ ++ +E+ G T N ++ A
Sbjct: 645 NGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRA 695
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 110/274 (40%), Gaps = 32/274 (11%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
AL F+++ C P + ++N LL A +AR +A F L
Sbjct: 103 ALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSHG------------- 149
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
A+G+ + P++ T+N+++ S R D+ +F SL
Sbjct: 150 -AFGR-----------------RIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLA 191
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P T+++++ + K A Y+ +M + + P + Y ++ +A +
Sbjct: 192 PDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRV 251
Query: 383 FDELSK-LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+++L + G ++T N ML+ C G+ EA ++E PD TY +
Sbjct: 252 WEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLC 311
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
++ + ++ M + G+VP+ + L+ F
Sbjct: 312 RSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGF 345
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 8/193 (4%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L K++K+L+ R M ++ + D Y LI + + + A+ L++++ +
Sbjct: 516 LIHGLCKAEKYLEASRFTREML-EKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDK 574
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G + D ++N LI H A + +A +MK C PN+VTYN L+ +
Sbjct: 575 GLQTDVVMHNILI----HGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETG 630
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
D+ +L+ + E+ L PDI +YN + E +L+ M ++ P IT+N
Sbjct: 631 CFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWN 690
Query: 295 LLIDS---YGKRQ 304
+L+ + YG Q
Sbjct: 691 ILVRAVIKYGPIQ 703
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 167/379 (44%), Gaps = 31/379 (8%)
Query: 95 PLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAV 154
P++R L K+ + + + FE LG S K TG Y+ LI
Sbjct: 736 PIIRHLCKHKEALAAHELVKKFENLGVSLK--------------------TGSYNALICG 775
Query: 155 MGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KG 212
+ + +A LFSEM+ GC PD Y+ ++ A K+ + L ++M KG
Sbjct: 776 LVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAM----GKSMRIEDMLKIQEEMHNKG 831
Query: 213 MERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIK 272
K VTYN ++ +++ +D+ L+ +L +P TY ++D K+G I+
Sbjct: 832 Y---KSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIE 888
Query: 273 EMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
+ E++ M C+P+ +N+L++ Y +K+ ++F+S++ P + ++ +I
Sbjct: 889 DAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVI 948
Query: 333 INY-GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGK 391
RL Y F+++T M P ITY +I G + A +++++ K G
Sbjct: 949 DTLCADGRLNDGLSY-FKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGI 1007
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
+ T N+++ G EA ++E G P+ TY L + Y+ + E
Sbjct: 1008 APNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFA 1067
Query: 452 LLKRMEQNGIVPNKRFFLE 470
RM G PN +++
Sbjct: 1068 AYGRMIVGGCRPNSSTYMQ 1086
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 182/419 (43%), Gaps = 13/419 (3%)
Query: 52 RTRPRTGICCVWTRPRSKRGRKSEELESKELVRVLMRSFSDKEP-----LVRTLNKYVKV 106
R RP + C P R S ++ +V +L RS + +P L ++ + +V
Sbjct: 39 RRRPSSRAGCRQLAPPPCEERVSRPGDAGNVVHML-RSAAAADPEEALELFLSVARQPRV 97
Query: 107 VRS-EHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAM 165
V + E C + E + + +VF MQ+Q A+ G + + +G +G R A
Sbjct: 98 VHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQ-IIKANVGTFCTVFGAVGVEGGLRSAP 156
Query: 166 WLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNI 225
M+ +G + YN LI + K+ +A+ ++ M + P + TY++
Sbjct: 157 VALPVMKEAGIVLNAYTYNGLI----YFLVKSGFDREAMDVYKAMAA-DGVVPTVRTYSV 211
Query: 226 LLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ 285
L+ A + R+ + V L E+ + P++Y+Y + G+ G ++E +L +M+
Sbjct: 212 LMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEG 271
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
CKPD++T +LI + VF + S +KP T+ +++ G +
Sbjct: 272 CKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVS 331
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
++ + A Y + ++Y + V A ++FDE+ + G + + N+++ +
Sbjct: 332 EIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGF 391
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A LF + + G TP+ T+ L + K+ K + M+ GIVP+
Sbjct: 392 LKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPD 450
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 149/338 (44%), Gaps = 6/338 (1%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ ++V++ M + YS L+ GK+ + L EM G RP+ Y
Sbjct: 189 EAMDVYKAMAAD-GVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSY--- 244
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
T + +A L +A +KM+ E CKP++VT +L++ A + +F ++
Sbjct: 245 -TICIRVLGQAGRLEEAYRILRKME-EEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKM 302
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
S PD TY ++D G +G + + + + +K++ +++++ +D+ +
Sbjct: 303 KASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRV 362
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
D+ VF + P ++NS+I + KA +A +F M TP+ T+
Sbjct: 363 DEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLF 422
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I +G +A + ++ + G V NA+L G A +F MG+
Sbjct: 423 INYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGI 482
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+PD+ TY ++ K +KA+ + K+ M +N P+
Sbjct: 483 SPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPD 520
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 140/331 (42%), Gaps = 52/331 (15%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
++G+ D + L+VF M KQ+ I Y+ LI+ K + A+ LF+ M G
Sbjct: 358 QVGRVD---EALDVFDEM-KQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHG-- 411
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
P P+ Y ++ + H K+ KAL ++ MK + P++V N +L A+ +
Sbjct: 412 PTPNGYTHVLFINYHG--KSGESLKALKRYELMKS-KGIVPDVVAGNAVLYGLAKTGRLG 468
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+F EL ++PD TY ++ K E + + M N+C PD++ N LI
Sbjct: 469 MAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLI 528
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK-- 355
D K ++ ++F L +PT T+N+++ G+ +GK + V Q + M
Sbjct: 529 DMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGR---EGKVKEVMQLLEGMNSN 585
Query: 356 -YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ P+ ITY N +L+ C NG A
Sbjct: 586 SFPPNIITY-----------------------------------NTVLDCLCKNGEVNYA 610
Query: 415 -DLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
D+L+ + N G PD S+Y + K +
Sbjct: 611 LDMLYSMTMN-GCMPDLSSYNTVMYGLVKED 640
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 132/387 (34%), Gaps = 75/387 (19%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ I V+G+ G+ A + +M GC+PD LI A LA A F
Sbjct: 244 YTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLI----QILCDAGRLADAKDVF 299
Query: 208 QKMKGMERCKPNIVTYNILLRACA-----------------------------------Q 232
KMK ++ KP+ VTY LL C Q
Sbjct: 300 WKMKASDQ-KPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQ 358
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK------------------------- 267
VD+ +F E+ + + P Y+YN ++ + K
Sbjct: 359 VGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYT 418
Query: 268 -------NGMIKEMESVLSR---MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
+G E L R MKS PD++ N ++ K ++VF L
Sbjct: 419 HVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELK 478
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
P T+ MI KA +A +F +M + P + +I M +
Sbjct: 479 AMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGN 538
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
A +IF EL ++ + T N +L G E L E ++ P+ TY +
Sbjct: 539 EAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVL 598
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPN 464
K +L M NG +P+
Sbjct: 599 DCLCKNGEVNYALDMLYSMTMNGCMPD 625
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 88/222 (39%), Gaps = 35/222 (15%)
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+YN ++ +I E + S MK C PD T++L++D+ GK + M ++ +
Sbjct: 768 SYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKI-QEE 826
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
MH+K Y +++TY II+ +
Sbjct: 827 MHNK----------------------------------GYKSTYVTYNTIISGLVKSKML 852
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
A ++ +L G T +L+ +G +A+ LF+ G P+ + Y +L
Sbjct: 853 DEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNIL 912
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
Y A E V +L + M + G+ P+ + + ++T +
Sbjct: 913 LNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCAD 954
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 102/254 (40%), Gaps = 11/254 (4%)
Query: 226 LLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ 285
L+RA + +V QV F + I+ ++ T+ V A G G ++ L MK
Sbjct: 110 LMRAHGRVGDVAQV---FDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAG 166
Query: 286 CKPDIITFN----LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
+ T+N L+ S R+A D V+K++ PT+ T++ +++ +GK R
Sbjct: 167 IVLNAYTYNGLIYFLVKSGFDREAMD----VYKAMAADGVVPTVRTYSVLMLAFGKRRDA 222
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
+ +M A P+ +Y I + G + A I ++ + G V T +
Sbjct: 223 ETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVL 282
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
++ C G +A +F PD TY L + V ++ ++ +G
Sbjct: 283 IQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGY 342
Query: 462 VPNKRFFLEALETF 475
N + A++
Sbjct: 343 NDNVVSYTAAVDAL 356
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 147/320 (45%), Gaps = 8/320 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + + LA+ F ++ +G R D + N L+ + +AL L
Sbjct: 118 YAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRT 177
Query: 208 QKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHE--SILAPDIYTYNGVMDA 264
++ C P++ +Y+ILL++ C Q ++ Q + L + + E ++ +PD+ Y V+D
Sbjct: 178 PELG----CVPDVFSYSILLKSLCDQGKS-GQADDLLRMMAEGGAVCSPDVVAYTTVIDC 232
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ K G + + + M PD++T++ ++ + K +A K E + +++ P
Sbjct: 233 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPD 292
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
T+N++I Y +A VF++M P +T ++ + AR++FD
Sbjct: 293 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFD 352
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
++ G++ V + ML Y G + LF+ G+ PD T+ +L KAY
Sbjct: 353 TMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCG 412
Query: 445 MKELVQKLLKRMEQNGIVPN 464
M + + M +G+ P+
Sbjct: 413 MLDKAMIIFNEMRDHGVKPD 432
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 160/388 (41%), Gaps = 43/388 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIA-DTGIYSKLIAVMGKKGQTRLAMWLFSEMR 172
+L + L K Q ++ R M + + D Y+ +I K+G A LF EM
Sbjct: 191 ILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMV 250
Query: 173 NSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM---------------------- 210
G PD Y++++ H KA+A+ KA + ++M
Sbjct: 251 QRGIPPDLVTYSSVV----HALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSST 306
Query: 211 ----------KGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
K M R P++VT N+L+ + + + + +F + PD+++Y
Sbjct: 307 GQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 366
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
+++ Y G + +M + M + PDI TF++LI +Y DK +F +
Sbjct: 367 KIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRD 426
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS- 377
KP + T+ ++I + A F +M P Y C+I G+C + S
Sbjct: 427 HGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQ--GFCTHGSL 484
Query: 378 -RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A+E+ E+ G + + ++++ C G +A +F+ + N+G PD+ Y +L
Sbjct: 485 LKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSML 544
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y E ++ M GI PN
Sbjct: 545 MDGYCLVGKMEKALRVFDAMVSAGIEPN 572
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 141/335 (42%), Gaps = 5/335 (1%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E F + + D Y+ LI GQ + A+ +F EMR PD N L+ +
Sbjct: 278 EAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGS 337
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
K + +A F M M+ P++ +Y I+L A + + LF +
Sbjct: 338 LC----KYGKIKEARDVFDTM-AMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGD 392
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+APDIYT++ ++ AY GM+ + + + M+ + KPD++T+ +I + + D
Sbjct: 393 GIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDA 452
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
+ F ++ P ++ +I + KA+ + ++ + + II
Sbjct: 453 MEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINN 512
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
+ A+ IFD +G+ + +++ YC+ G +A +F+ + G+ P+
Sbjct: 513 LCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPN 572
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y L Y K + L + M Q GI P+
Sbjct: 573 VVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPS 607
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 140/307 (45%), Gaps = 11/307 (3%)
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM-KGMERCKPNIVTYNILLRACAQA 233
GC PD Y+ L+ + D+ K+ +A + M +G C P++V Y ++ +
Sbjct: 181 GCVPDVFSYSILLKSLC---DQGKS-GQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKE 236
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+V++ LFKE+ + + PD+ TY+ V+ A K + + E+ L +M + PD T+
Sbjct: 237 GDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTY 296
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM---IINYGKARLQGKAEYVFQK 350
N LI Y + + +VFK + P + T N + + YGK + +A VF
Sbjct: 297 NNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIK---EARDVFDT 353
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M P +Y+ ++ Y + ++FD + G + T + +++AY G+
Sbjct: 354 MAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGM 413
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
+A ++F + GV PD TY + A + + + +M G+ P+K +
Sbjct: 414 LDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHC 473
Query: 471 ALETFSS 477
++ F +
Sbjct: 474 LIQGFCT 480
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 145/346 (41%), Gaps = 10/346 (2%)
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
+ +W + + VF+ M++ + D + L+ + K G+ + A +F M G PD
Sbjct: 306 TGQWKEAVRVFKEMRRHS-ILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 364
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
Y ++ + L F M G + P+I T+++L++A A +D+
Sbjct: 365 SYKIMLNGYA----TKGCLVDMTDLFDLMLG-DGIAPDIYTFSVLIKAYANCGMLDKAMI 419
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
+F E+ + + PD+ TY V+ A + G + + ++M PD ++ LI +
Sbjct: 420 IFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFC 479
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
+ K +++ +M++ + + F+S+I N K A+ +F + P +
Sbjct: 480 THGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAV 539
Query: 362 TYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
Y + M GYC + +A +FD + G + V ++ YC G E LF
Sbjct: 540 VYS--MLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFR 597
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
G+ P + Y ++ A + M ++GI NK
Sbjct: 598 EMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINK 643
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 167/421 (39%), Gaps = 56/421 (13%)
Query: 80 KELVRVL--MRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQK 137
KE VRV MR S P V TLN +L L K K + +VF M
Sbjct: 310 KEAVRVFKEMRRHS-ILPDVVTLN------------MLMGSLCKYGKIKEARDVFDTMA- 355
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+ D Y ++ KG LF M G PD ++ LI A+ +
Sbjct: 356 MKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYAN----C 411
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
L KA+ F +M+ KP++VTY ++ A + +D F ++ + +APD Y
Sbjct: 412 GMLDKAMIIFNEMRD-HGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 470
Query: 258 YNGVMDAYGKNG-MIKEMESVLSRMK--------------SNQCK--------------- 287
Y+ ++ + +G ++K E +L M +N CK
Sbjct: 471 YHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTV 530
Query: 288 -----PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
PD + +++L+D Y +K +VF +++ + +P + + +++ Y K
Sbjct: 531 NVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRID 590
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
+ +F++M PS I Y II A+ F E+++ G + T N +L
Sbjct: 591 EGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVL 650
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+ N EA LF+ M V D T + + E + L + ++G+V
Sbjct: 651 RGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLV 710
Query: 463 P 463
P
Sbjct: 711 P 711
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 100/226 (44%), Gaps = 19/226 (8%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +S +I + K G+ A +F N G PD VY+ L+ + + KA
Sbjct: 502 DIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLV----GKMEKA 557
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
L F M G+E PN+V Y L+ + +D+ +LF+E+ + + P YN +
Sbjct: 558 LRVFDAMVSAGIE---PNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNII 614
Query: 262 MDAYGKNGM-----IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+D G +K E S + N+C T+N+++ + K + FD+ +FK L
Sbjct: 615 IDGLFVAGRTVPAKVKFHEMTESGIAINKC-----TYNIVLRGFFKNRCFDEAIFLFKEL 669
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
K + T N+MI + R +A+ +F ++ P +T
Sbjct: 670 RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715
>gi|3107905|dbj|BAA25906.1| leaf protein [Ipomoea nil]
Length = 665
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 144/326 (44%), Gaps = 6/326 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D+ ++ +I + G + AM +F +MR GC+P S +NALI K + +K
Sbjct: 137 DSIFFNPMINAFCESGNVKEAMKIFRKMREKGCKPTASTFNALIKG-FGIIGKPEESSKL 195
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L + M E KP+ TYNIL++A N+++ + + + L PD+ TYN +
Sbjct: 196 L---EIMSREENIKPDDRTYNILVQAWCNKNNIEKAWGVVHRMVGAGLKPDVVTYNTIAR 252
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF-DKMEQVFKSLMHSKEK 322
AY + ++S+M++N+ P++ T +++D Y K D ++ ++K +
Sbjct: 253 AYARGKETSRAAELISQMQNNKVAPNVRTCGIVVDGYSKEGNMADALKFIYK-MQGFGVH 311
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P L FNS++ + + M P +TY I+ + + + E+
Sbjct: 312 PNLFIFNSLLKGFLDITDTKGVDETLTLMQEFGVKPDVVTYSTIMNAWSSAGLMEKCEEM 371
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
F ++ K G + + + + Y G P +A+ L E G P+ + + +
Sbjct: 372 FQDMIKSGIEPDNHAFSILAKGYVRAGEPKKAEALLEAMATHGAHPNVVMFTTIISGWCS 431
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFF 468
A E ++ RM + + PN F
Sbjct: 432 AAKMEDALRVYDRMCRMDVQPNLNTF 457
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 150/332 (45%), Gaps = 6/332 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ ++A + + + + L ++ +G RPD +N +I A + + + +A+ F
Sbjct: 106 YTTVLAALTLQKRFKSIPLLLKKVEQNGLRPDSIFFNPMINAFCESGN----VKEAMKIF 161
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL-HESILAPDIYTYNGVMDAYG 266
+KM+ + CKP T+N L++ ++ + L + + E + PD TYN ++ A+
Sbjct: 162 RKMR-EKGCKPTASTFNALIKGFGIIGKPEESSKLLEIMSREENIKPDDRTYNILVQAWC 220
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
I++ V+ RM KPD++T+N + +Y + + + ++ + ++K P +
Sbjct: 221 NKNNIEKAWGVVHRMVGAGLKPDVVTYNTIARAYARGKETSRAAELISQMQNNKVAPNVR 280
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T ++ Y K A KM P+ + ++ + + E +
Sbjct: 281 TCGIVVDGYSKEGNMADALKFIYKMQGFGVHPNLFIFNSLLKGFLDITDTKGVDETLTLM 340
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
+ G V T + ++ A+ GL + + +F++ G+ PD+ + +L K Y +A
Sbjct: 341 QEFGVKPDVVTYSTIMNAWSSAGLMEKCEEMFQDMIKSGIEPDNHAFSILAKGYVRAGEP 400
Query: 447 ELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ + LL+ M +G PN F + + S+
Sbjct: 401 KKAEALLEAMATHGAHPNVVMFTTIISGWCSA 432
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 120/294 (40%), Gaps = 42/294 (14%)
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
E +P +VTY +L A + + L K++ ++ L PD +N +++A+ ++G +KE
Sbjct: 97 EGHRPTLVTYTTVLAALTLQKRFKSIPLLLKKVEQNGLRPDSIFFNPMINAFCESGNVKE 156
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL-MHSKE---KPTLPTFN 329
+ +M+ CKP TFN LI +G K E+ K L + S+E KP T+N
Sbjct: 157 AMKIFRKMREKGCKPTASTFNALIKGFG---IIGKPEESSKLLEIMSREENIKPDDRTYN 213
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
++ + KA V +M P +TY I Y SRA E+ ++
Sbjct: 214 ILVQAWCNKNNIEKAWGVVHRMVGAGLKPDVVTYNTIARAYARGKETSRAAELISQMQNN 273
Query: 390 GKDMKVSTLNAMLEAYC--------------MNGLPTEADLLFENS-------------- 421
V T +++ Y M G +L NS
Sbjct: 274 KVAPNVRTCGIVVDGYSKEGNMADALKFIYKMQGFGVHPNLFIFNSLLKGFLDITDTKGV 333
Query: 422 -------HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
GV PD TY + A++ A + E +++ + M ++GI P+ F
Sbjct: 334 DETLTLMQEFGVKPDVVTYSTIMNAWSSAGLMEKCEEMFQDMIKSGIEPDNHAF 387
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 113/255 (44%), Gaps = 9/255 (3%)
Query: 226 LLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ 285
L++ + +V+++ K L E P + TY V+ A K + +L +++ N
Sbjct: 74 LMKTLIERGKPQEVHSITKGLTEEGHRPTLVTYTTVLAALTLQKRFKSIPLLLKKVEQNG 133
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
+PD I FN +I+++ + + ++F+ + KPT TFN++I +G + GK E
Sbjct: 134 LRPDSIFFNPMINAFCESGNVKEAMKIFRKMREKGCKPTASTFNALIKGFG---IIGKPE 190
Query: 346 YVFQKMTAM----KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
+ + M P TY ++ + +N+ +A + + G V T N +
Sbjct: 191 ESSKLLEIMSREENIKPDDRTYNILVQAWCNKNNIEKAWGVVHRMVGAGLKPDVVTYNTI 250
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK-ANMKELVQKLLKRMEQNG 460
AY + A L N V P+ T ++ Y+K NM + + K + +M+ G
Sbjct: 251 ARAYARGKETSRAAELISQMQNNKVAPNVRTCGIVVDGYSKEGNMADAL-KFIYKMQGFG 309
Query: 461 IVPNKRFFLEALETF 475
+ PN F L+ F
Sbjct: 310 VHPNLFIFNSLLKGF 324
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 155/333 (46%), Gaps = 6/333 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y +I + + G+++ A L EM + G +P+ +Y LI H K ++ A
Sbjct: 456 YGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGH----SKEGNISLACEAL 511
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+KM P++ YN L++ + +++ + ++ + L PD +TY+G++ Y K
Sbjct: 512 EKMT-KANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCK 570
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G +++ + +L +M ++ KP+ T+ L++ Y K ++K+ + +S++ S +KP
Sbjct: 571 TGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHI 630
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ +I N ++ A V ++ P Y +I+ ++ +A + DE++
Sbjct: 631 YGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMA 690
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
K G + + NA+++ +C +G + A +F++ G+ P+ TY L K
Sbjct: 691 KEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDIT 750
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSSLA 480
L K M GI P+ F L T S A
Sbjct: 751 DAFDLYKEMLDRGIAPDA-FVYNVLATGCSDAA 782
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 139/298 (46%), Gaps = 13/298 (4%)
Query: 171 MRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRAC 230
M +G PD Y+ I AH RD A F++M+ + C N VTYN+++
Sbjct: 234 MEGAGILPDVYTYSTFIEAHCKARD----FDAAKKVFEEMRRRD-CAMNEVTYNVMISGL 288
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
++ V++ +E+ + L+PD +TY +M+ K +KE +++L M + KP+I
Sbjct: 289 CRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNI 348
Query: 291 ITFNLLIDSYGKR----QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
+ + L+D + K +AFD + K ++ + +P ++++I K G+A
Sbjct: 349 VVYGTLVDGFMKEGKTAEAFD----ILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASK 404
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+ ++M + P TY ++ + + A E+ +E+ G V + M+ C
Sbjct: 405 LLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLC 464
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
NG EA L E + G+ P++ Y L ++K L + L++M + + P+
Sbjct: 465 QNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPD 522
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 158/341 (46%), Gaps = 24/341 (7%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y L+ K+G+T A + EM ++G +P+ +Y+ LI K L +A
Sbjct: 350 VYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLC----KIGQLGRASKL 405
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
++M + +P+ TYN L++ Q + D L E+ S + P++Y+Y +++
Sbjct: 406 LKEMIKV-GLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLC 464
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ----AFDKMEQVFKSLMHSKEK 322
+NG KE ++L M S KP+ + LI + K A + +E++ K+ +H
Sbjct: 465 QNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVH---- 520
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAR 380
P L +NS+I +AE + ++ P TY +I +GYC N+ +A
Sbjct: 521 PDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLI--HGYCKTGNLEKAD 578
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
++ ++ G T +LE Y + + + ++ G PD+ Y ++ +
Sbjct: 579 QLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNL 638
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
+++ E+ +L +E+NG+VP+ L +SS ++G
Sbjct: 639 SRSENMEVAFMVLTEVEKNGLVPD-------LHIYSSLISG 672
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 147/349 (42%), Gaps = 6/349 (1%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
+VF M+++ + + Y+ +I+ + + G A EM + G PD Y AL+
Sbjct: 264 KVFEEMRRRDCAMNEV-TYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNG 322
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
K L +A +M KPNIV Y L+ + + + KE+ +
Sbjct: 323 LC----KGSRLKEAKALLDEMS-CSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISA 377
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+ P+ Y+ ++ K G + +L M +PD T+N L+ + ++ D
Sbjct: 378 GVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGA 437
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
++ + +S P + ++ MI + +A + ++M + P+ Y +I
Sbjct: 438 FELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIG 497
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
+ N+S A E ++++K + N++++ G EA+ + G+ PD
Sbjct: 498 HSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPD 557
Query: 430 SSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
TY L Y K E +LL++M +G+ PN + + LE + S
Sbjct: 558 EFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKS 606
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 112/247 (45%), Gaps = 10/247 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D IY +I + + +A + +E+ +G PD +Y++LI+ D + KA
Sbjct: 627 DNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIAD----MEKA 682
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+G +M E +P IV YN L+ ++ ++ + +F + L P+ TY ++D
Sbjct: 683 VGLLDEM-AKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALID 741
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVF-KSLMHSKEK 322
KNG I + + M PD +N+L + G A D + +F M ++
Sbjct: 742 GNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVL--ATGCSDAADLEQALFLTEEMFNRGY 799
Query: 323 PTLPTFNSMIINYGK-ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
+ FN+++ + K +LQ + E + M + P+ T E +++ +G + A
Sbjct: 800 ANVSLFNTLVHGFCKRGKLQ-ETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHR 858
Query: 382 IFDELSK 388
+F EL +
Sbjct: 859 VFAELQQ 865
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 18/229 (7%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
++ + D IYS LI+ + K A+ L EM G P YNALI + D
Sbjct: 655 EKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGD- 713
Query: 197 AKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
+++A F + KG+ PN VTY L+ + ++ L+KE+ + +APD
Sbjct: 714 ---ISRARNVFDSILAKGL---VPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPD 767
Query: 255 IYTYN----GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
+ YN G DA + E + +R +N + FN L+ + KR + E
Sbjct: 768 AFVYNVLATGCSDAADLEQALFLTEEMFNRGYAN-----VSLFNTLVHGFCKRGKLQETE 822
Query: 311 QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
++ +M + P T ++ +GKA G+A VF ++ K + S
Sbjct: 823 KLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQS 871
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 84/217 (38%)
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
+P + ++D Y K G ++ V+ M P N L+ + A + + +
Sbjct: 170 SPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWK 229
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+ + + P + T+++ I + KAR A+ VF++M + +TY +I+
Sbjct: 230 LKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLC 289
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
V A +E+ G T A++ C EA L + G+ P+
Sbjct: 290 RSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIV 349
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
Y L + K +LK M G+ PNK +
Sbjct: 350 VYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMY 386
>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 582
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 156/355 (43%), Gaps = 42/355 (11%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y LI + K G+ A+ L + +P+ +YN +I KAK + A +
Sbjct: 178 YGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIID----NMCKAKLVNDAFDLY 233
Query: 208 QKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+M +R P+ T N L+ C + + V L K + E+I P +YT++ ++DA+
Sbjct: 234 SQMVA-KRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENI-NPRMYTFSILVDAFC 291
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K G +KE + +L D++T+N L+D Y + +K + +F S+ +
Sbjct: 292 KEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQ 351
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
++ +MI K ++ +A +F++M K P+ +TY +I G +S ++ DE+
Sbjct: 352 SYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEM 411
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
G+ + T N++L+A C N +A L N + G+ PD TY +L K ++
Sbjct: 412 HDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKL 471
Query: 447 ELVQK-----------------------------------LLKRMEQNGIVPNKR 466
E QK LL +ME NG +PN +
Sbjct: 472 EDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAK 526
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 155/366 (42%), Gaps = 45/366 (12%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ +I M K A L+S+M PD N+LI L +A+G
Sbjct: 212 MYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFC----IMGQLKEAVGL 267
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
KM +E P + T++IL+ A + V + + + + D+ TYN +MD Y
Sbjct: 268 LHKMI-LENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYC 326
Query: 267 ------------------------------KNG-----MIKEMESVLSRMKSNQCKPDII 291
NG M+ E ++ M+ + P+++
Sbjct: 327 LVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVV 386
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM 351
T+N LID GK + ++ + + P + T+NS++ K KA + +
Sbjct: 387 TYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNL 446
Query: 352 TAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
P TY +I G C + + A+++F++L G ++ V T M++ +C+ G
Sbjct: 447 KDQGIRPDMYTYTVLIK--GLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKG 504
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF-F 468
L A L + G P++ TY+++ + + + ++ +KLL+ M G++ K + +
Sbjct: 505 LFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGLLDEKSYIY 564
Query: 469 LEALET 474
L + ET
Sbjct: 565 LASKET 570
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 98/193 (50%), Gaps = 10/193 (5%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ + +F M + R I + Y+ LI +GK G+ + L EM + G P+ YN++
Sbjct: 368 EAVNLFEEM-RCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSI 426
Query: 187 ITAHL--HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
+ A H DKA AL L K +G+ +P++ TY +L++ Q+ ++ +F+
Sbjct: 427 LDALCKNHHVDKAIALLTNL----KDQGI---RPDMYTYTVLIKGLCQSGKLEDAQKVFE 479
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
+L D+YTY ++ + G+ ++LS+M+ N C P+ T+ ++I S ++
Sbjct: 480 DLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKD 539
Query: 305 AFDKMEQVFKSLM 317
D E++ + ++
Sbjct: 540 ENDMAEKLLREMI 552
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 136/321 (42%), Gaps = 13/321 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++K+++ + K A+ L +M +G D +N LI + + + G
Sbjct: 73 FNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFS-VFGKI 131
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAP----DIYTYNGVMD 263
K KG + PN +T+N L++ ++ Q AL H+ ++A D +Y +++
Sbjct: 132 LK-KGFD---PNAITFNTLIKGLCLKGHIHQ--AL--NFHDKVVAQGFHLDQVSYGTLIN 183
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K G I +L R+ +P+ + +N++ID+ K + + ++ ++ + P
Sbjct: 184 GLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISP 243
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T NS+I + +A + KM P T+ ++ + V A+ +
Sbjct: 244 DDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMML 303
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
K + V T N++++ YC+ +A +F++ + GV + +Y + K
Sbjct: 304 GVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKI 363
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
M + L + M I+PN
Sbjct: 364 KMVDEAVNLFEEMRCRKIIPN 384
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 6/224 (2%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
++F M R IA+ Y+ +I + K A+ LF EMR P+ YN+LI
Sbjct: 336 DIFDSM-ASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDG 394
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
K ++ L +M + PNI+TYN +L A + +VD+ AL L +
Sbjct: 395 ----LGKLGKISCVLKLVDEMHDRGQ-PPNIITYNSILDALCKNHHVDKAIALLTNLKDQ 449
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+ PD+YTY ++ ++G +++ + V + D+ T+ ++I + + FD
Sbjct: 450 GIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAA 509
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
+ + + P T+ +I++ + AE + ++M A
Sbjct: 510 LALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIA 553
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/285 (19%), Positives = 116/285 (40%), Gaps = 41/285 (14%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P I+ +N +L + +A++ +L +++ + + D +T+N +++ + + G+ SV
Sbjct: 68 PPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSV 127
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKR----QAFDKMEQVFKSLMHSKE------------ 321
++ P+ ITFN LI + QA + ++V H +
Sbjct: 128 FGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCK 187
Query: 322 -------------------KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
+P +N +I N KA+L A ++ +M A + +P
Sbjct: 188 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPD--D 245
Query: 363 YECIITMYGYCDNVSRAREIFDELSKL---GKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
+ C +YG+C + + +E L K+ + ++ T + +++A+C G EA ++
Sbjct: 246 FTCNSLIYGFCI-MGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLG 304
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ + D TY L Y + + M G++ N
Sbjct: 305 VTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIAN 349
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 1/153 (0%)
Query: 313 FKSLMHSKE-KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
F SL+H K P + FN ++ + KA+ A + Q+M F T+ +I +
Sbjct: 57 FNSLLHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFS 116
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
S + +F ++ K G D T N +++ C+ G +A + G D
Sbjct: 117 QLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQV 176
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+Y L K +LLKR++ + PN
Sbjct: 177 SYGTLINGLCKVGRITAALQLLKRVDGKLVQPN 209
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 148/330 (44%), Gaps = 11/330 (3%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAM-WLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
R A+ YS L+ + K + A+ L E+ G PD Y+ +I K
Sbjct: 212 HRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLC----K 267
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
A L A+ F++M C P +TYN L+ +A ++D+ L ++ + APD+
Sbjct: 268 AGRLRDAVDIFEEMS----CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVI 323
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TY +M A+ K G + + + +M +N+ PD++TF L+D + ++ + +
Sbjct: 324 TYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI 383
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
PT+ T+N ++ Y K+ KAE + + + P+ +TY ++
Sbjct: 384 TRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRT 443
Query: 377 SRAREIFDELSKLGK--DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
+A + D+L+ G V+ +L+A C +G +A +E G P ++T+
Sbjct: 444 DQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFA 503
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ A KA+ + +LL+ M + G P
Sbjct: 504 TVVFALCKAHQPQQAHELLEEMIKYGHTPG 533
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 151/341 (44%), Gaps = 12/341 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + L K ++ + + + +R + D YS +I + K G+ R A+ +F EM
Sbjct: 225 LVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM--- 281
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
C P YN+LI + D +A+ + LG KM + C P+++TY L+ A +
Sbjct: 282 SCAPTAITYNSLIGGYCRAGDMDEAI-RLLG---KMVD-DNCAPDVITYTTLMSAFCKMG 336
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+D LF+++ + L+PD+ T+ ++D G +++ +L + C P I T+N
Sbjct: 337 RLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYN 396
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA-RLQGKAEYVFQKMTA 353
++D Y K K E++ P T+N ++ +A R +Y+ Q +
Sbjct: 397 CVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSE 456
Query: 354 MKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P+ + II + C + A + ++E+ + G +T ++ A C P
Sbjct: 457 GGPCPTSVAMYAII-LDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQP 515
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKL 452
+A L E G TP T + AY +A M + +L
Sbjct: 516 QQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADEL 556
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 145/331 (43%), Gaps = 14/331 (4%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K R T +++ +I + + G+ R A+ ++ +M N PD Y L+ H K
Sbjct: 107 KSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLV----HGLSK 161
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
A L A+ Q+M R P+ T +++++ VD L +E+ +A +
Sbjct: 162 AGRLRDAVQVLQEMVS-ARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAI 220
Query: 257 TYNGVMDAYGKNGMIKEMESVL-SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
TY+ ++D K + E ++L + PDI+T++ +ID K +F+
Sbjct: 221 TYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE 280
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
+ + PT T+NS+I Y +A +A + KM P ITY +++ +
Sbjct: 281 MSCA---PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGR 337
Query: 376 VSRAREIFDEL--SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ A E+F ++ +KL D V T ++++ C G +A L E G P TY
Sbjct: 338 LDDAYELFQQMVANKLSPD--VVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTY 395
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ Y K+N ++L+ G VPN
Sbjct: 396 NCVVDGYCKSNQVRKAEELVADFRSRGFVPN 426
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 146/363 (40%), Gaps = 41/363 (11%)
Query: 140 WYIADTGIYSKLIAVMGKKGQTR-LAMWLFSEMRNSGCRPDPSVYNALITAHLHTRD--- 195
Y +D+ ++ ++ + + R L L E+R+ G PDP N ++ RD
Sbjct: 5 GYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTT 64
Query: 196 ---------------------------KAKALAKALGYFQKMK--GMERCKPNIVTYNIL 226
KA+ L +A+G MK GM P + +N++
Sbjct: 65 AMALFDKMAELGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGM---NPGTLLHNVV 121
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+ +A + ++++++++ PD TY ++ K G +++ VL M S +
Sbjct: 122 IGGLCRAGRLRHALGVYRQMNDA-HPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARH 180
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA-RLQGKAE 345
PD T +++ S D ++ + ++H T+++++ K RL
Sbjct: 181 VPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVA 240
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+ ++T +TP +TY +I G C R R+ D ++ T N+++ Y
Sbjct: 241 LLLGEVTRRGFTPDIVTYSTVID--GLC-KAGRLRDAVDIFEEMSCAPTAITYNSLIGGY 297
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
C G EA L + PD TY L A+ K + +L ++M N + P+
Sbjct: 298 CRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDV 357
Query: 466 RFF 468
F
Sbjct: 358 VTF 360
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 164/386 (42%), Gaps = 41/386 (10%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L ++L K+++ + + + M+K R + Y+ +I K+G+ A +F EM
Sbjct: 243 MLVDDLCKNNRSAKGYLLLKKMRK-RMISPNEITYNSIINGFVKEGKIGAATRIFQEMSM 301
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
P+ YNALI H H + +AL +M KPN V+Y+ LL +
Sbjct: 302 LNLLPNCVTYNALIDGHCHDGNFEQALT-----ILEMMEATGPKPNEVSYSALLNGLCRH 356
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ ++ + + + + Y ++D +NG++ E +L +M + PD++TF
Sbjct: 357 AKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTF 416
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK--------------AR 339
++LI+ + + ++++ + + P + ++I NY K +R
Sbjct: 417 SVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSR 476
Query: 340 LQ---------------------GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
+ G AEY F M+ + P+ IT++CII YG N +
Sbjct: 477 IGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLK 536
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A +FDE+ K G T +L+A C G EA L + H + D+ TY +
Sbjct: 537 AFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILV 596
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPN 464
K+ M L M Q ++P+
Sbjct: 597 ETFKSGMLTDAVALFDEMVQRNVLPD 622
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 158/384 (41%), Gaps = 50/384 (13%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
++ LI V ++G A+ F M G P N L+ + K + + +
Sbjct: 100 VFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLV----KERKVGAVWLF 155
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F++M C P++ T+NIL+ + + L K++ ES P + TYN V++ Y
Sbjct: 156 FKEMLARRVC-PDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYC 214
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K G K ++ +M S + D T+N+L+D K K + K + P
Sbjct: 215 KKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEI 274
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD-- 384
T+NS+I + K G A +FQ+M+ + P+ +TY +I + + N +A I +
Sbjct: 275 TYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMM 334
Query: 385 -------------------------ELSKL--------GKDMKVSTLNAMLEAYCMNGLP 411
ELSK G + AM++ C NGL
Sbjct: 335 EATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLL 394
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFL-- 469
E+ L + GV PD T+ +L + + + V++++ +M + G+ PN +
Sbjct: 395 NESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTL 454
Query: 470 --------EALETFSSSLAGSQSG 485
+ +E F +A S+ G
Sbjct: 455 IYNYCKTGDVVEAFKVYVAMSRIG 478
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/359 (19%), Positives = 149/359 (41%), Gaps = 7/359 (1%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
++ Y+ Y+ ++ KKG+ + A+ L +M + G D YN L+ D
Sbjct: 195 EESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVD------DL 248
Query: 197 AKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
K A GY K +R PN +TYN ++ + + +F+E+ L P+
Sbjct: 249 CKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNC 308
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
TYN ++D + +G ++ ++L M++ KP+ ++++ L++ + F+ + + +
Sbjct: 309 VTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILER 368
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
+ + + +MI + L ++ + KM P +T+ +I +
Sbjct: 369 MRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGK 428
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+ +EI ++ K G ++ YC G EA ++ +G + +
Sbjct: 429 IKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNV 488
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTRS 494
L + K + + M + G VPN F + + +S G ++ S ++ ++
Sbjct: 489 LVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKA 547
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 122/295 (41%), Gaps = 5/295 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS L+ + + + L+ + MR +G Y A+I + L +++
Sbjct: 346 YSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLC----RNGLLNESVKLL 401
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
KM + P++VT+++L+ + + V + +++++ LAP+ Y ++ Y K
Sbjct: 402 DKMLK-DGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCK 460
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + E V M + N+L+ S K E F + P T
Sbjct: 461 TGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSIT 520
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
F+ +I YG + KA +F +M + PS TY ++ A+ + D+L
Sbjct: 521 FDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLH 580
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+ + T N +L +G+ T+A LF+ V PDS TY +++ +
Sbjct: 581 YIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIR 635
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 123/322 (38%), Gaps = 75/322 (23%)
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARN 235
C+ +PSV++ LI +L + + AL F+ M G+ P++ T N+LL + R
Sbjct: 94 CKSNPSVFDLLIRVYL----REGMVGDALETFRLM-GIRGFNPSVYTCNMLLGKLVKERK 148
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNL 295
V V FKE M + + PD+ TFN+
Sbjct: 149 VGAVWLFFKE-----------------------------------MLARRVCPDVSTFNI 173
Query: 296 LIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG-----KARLQ--------- 341
LI+ K + K + S P++ T+N+++ Y KA L+
Sbjct: 174 LINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKG 233
Query: 342 ---------------------GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
K + +KM +P+ ITY II + + A
Sbjct: 234 IEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAAT 293
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
IF E+S L T NA+++ +C +G +A + E G P+ +Y L
Sbjct: 294 RIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGL 353
Query: 441 TKANMKELVQKLLKRMEQNGIV 462
+ EL + +L+RM NG++
Sbjct: 354 CRHAKFELSKSILERMRMNGMI 375
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 128/320 (40%), Gaps = 5/320 (1%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
DT Y+ ++ K G A+ LF EM PD Y A+I A L R K A
Sbjct: 586 VDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTY-AIIFAGLIRRGKMVA--- 641
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
AL ++ + G P V Y + +A +++ ++ L D+ N ++
Sbjct: 642 ALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVIL 701
Query: 263 DAYGKNGMIKEMESVLSRMKSN-QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ Y + G + + + + M S P + T+N+L+ Y K++ K ++ +M +
Sbjct: 702 NGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGI 761
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P T +S+I+ + K+ + + +KM T+ +I Y D V +A +
Sbjct: 762 FPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFD 821
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ + ++ ++T ++++ E+ LL G PD Y L
Sbjct: 822 LVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMC 881
Query: 442 KANMKELVQKLLKRMEQNGI 461
+ KL ME GI
Sbjct: 882 RMGHIHGAFKLKDEMEALGI 901
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 149/353 (42%), Gaps = 14/353 (3%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
K+ ++ +V+ M + Y A+ I + L++ + K G+ +A + F M G P+
Sbjct: 460 KTGDVVEAFKVYVAMSRI-GYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNS 518
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
++ +I + ++ + KA + F +M P+ TY LL+A +A +
Sbjct: 519 ITFDCIINGYGNSGNGLKAFS----MFDEMIKAGH-HPSHFTYGGLLKALCRAGKFKEAK 573
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
L +LH A D TYN ++ K+GM+ + ++ M PD T+ ++
Sbjct: 574 RLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGL 633
Query: 301 GKRQAFDKMEQVFKSLMH----SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
+R + +L+ S EK TF + G+++ A Y + M
Sbjct: 634 IRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSK---AALYFCEDMEKNGL 690
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDEL-SKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
I I+ Y +++A +IF + S + ++T N +L Y ++
Sbjct: 691 CADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCS 750
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
L+ G+ PD T L + K+ M ++ KLLK+M +G+ ++ F
Sbjct: 751 NLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTF 803
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 76/180 (42%)
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
CK + F+LLI Y + + F+ + P++ T N ++ K R G
Sbjct: 94 CKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVW 153
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
F++M A + P T+ +I + + +A + ++ + G V T N +L Y
Sbjct: 154 LFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWY 213
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
C G A L + + G+ D+ TY +L K N LLK+M + I PN+
Sbjct: 214 CKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNE 273
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 86/221 (38%), Gaps = 22/221 (9%)
Query: 117 EELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGC 176
+E+GK+ + + +F D + +I+V+ + + + L EM GC
Sbjct: 814 DEVGKAFDLVNIMNLFD-------IFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGC 866
Query: 177 RPDPSVYNALIT-----AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA 231
PD Y AL+ H+H K K +ALG V + L+R A
Sbjct: 867 IPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGI----------SSGDVAESALVRGLA 916
Query: 232 QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDII 291
+ V++ + + L P I T+ +M + +N + E + M K D+I
Sbjct: 917 KCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVI 976
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
+N+LI +++K + P + T+ +I
Sbjct: 977 AYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILI 1017
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 146/352 (41%), Gaps = 40/352 (11%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ LI ++ KKG+ R A + S++ PD Y +LI H R+ L A G F
Sbjct: 243 FNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRN----LDLAFGVF 298
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M E C PN VTY+ L+ VD+ + +E+ E + P +YTY + A
Sbjct: 299 DRMVK-EGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCA 357
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+E +++RMK C+P++ T+ LI + + ++ ++ P T
Sbjct: 358 IEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVT 417
Query: 328 FNSMIINY-----------------GKARLQG------------------KAEYVFQKMT 352
+N++I G L KA +F+KM
Sbjct: 418 YNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML 477
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
M P+ +TY +I Y NV+ A + D + + G + T N ++ + G
Sbjct: 478 KMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLE 537
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A F+ G+ P+ +Y L ++K ++ LL+RME+ G PN
Sbjct: 538 SASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPN 589
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 150/339 (44%), Gaps = 5/339 (1%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+R + Y+ LI+ + + G+ +A+ L+ +M G P+ YNALI
Sbjct: 372 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC----V 427
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+ AL F M+G N TYN +++ ++++ LF+++ + P +
Sbjct: 428 GGRFSTALKIFHWMEG-HGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVV 486
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TYN +++ Y G + +L MK N C+PD T+N L+ + K + F+ +
Sbjct: 487 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM 546
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+ P ++ ++I + K A + ++M M P+ +Y +I +
Sbjct: 547 VECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRF 606
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
S A +I D++++ G V T +++ C NG A +F + P+ TY L
Sbjct: 607 SEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL 666
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ + + LLK ME+ G+ P++ F ++ F
Sbjct: 667 IYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGF 705
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 143/373 (38%), Gaps = 58/373 (15%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKA-------- 199
Y+ LI K G+ +A+ L M GC P+ YNA+I ++A
Sbjct: 558 YTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMA 617
Query: 200 ----LAKALGYFQKMKGMER------------------CKPNIVTYNILLRACAQARNVD 237
L + Y + G+ R C PN+ TY+ L+ Q D
Sbjct: 618 EQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKAD 677
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ L KE+ LAPD T+ ++D + G I +L RM CKP+ T+++L+
Sbjct: 678 EAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLL 737
Query: 298 DSYGKR------QAFDKMEQVFKSLMHSKE------------------KPTLPTFNSMII 333
K + + E V+ H K+ +PTL T+++++
Sbjct: 738 KGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVS 797
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGK 391
+ +AE + + M + P Y ++ +C N V A +IF + G
Sbjct: 798 GLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLI--AHCKNLEVDHALKIFHSIEAKGF 855
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
+ +S A++ A C G EA LF+N D + +L K +L K
Sbjct: 856 QLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMK 915
Query: 452 LLKRMEQNGIVPN 464
LL ME PN
Sbjct: 916 LLHIMESKNFTPN 928
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 145/344 (42%), Gaps = 35/344 (10%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y++L++ K G+ A + F EM G P+P Y LI H K + A
Sbjct: 519 DEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGH----SKDGKVDIA 574
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L ++M+ M C PN+ +YN ++ ++ + + ++ E L P++ TY ++D
Sbjct: 575 LSLLERMEEM-GCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLID 633
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+NG + + M+ +C P++ T++ LI + D+ E + K + P
Sbjct: 634 GLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAP 693
Query: 324 TLPTFNSMIINYGKARLQGKAEYVF---QKMTAMKYTPSFITY---------ECII---- 367
TF S+I + + G+ ++ F ++M + P++ TY EC++
Sbjct: 694 DEVTFTSLIDGF---VVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEK 750
Query: 368 ------TMYGYCD-----NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
+Y + N + +S++G + + T + ++ C G EA+
Sbjct: 751 VAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQ 810
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
L ++ G PD Y L A+ K + K+ +E G
Sbjct: 811 LVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKG 854
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 158/419 (37%), Gaps = 69/419 (16%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM--- 171
L EL ++ L++F WM+ +A+T Y+++I + G AM LF +M
Sbjct: 421 LINELCVGGRFSTALKIFHWMEGH-GSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKM 479
Query: 172 --------------------------------RNSGCRPDPSVYNALITAHLHTRDKAKA 199
+ +GC PD YN L++ K
Sbjct: 480 GPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGF----SKWGK 535
Query: 200 LAKALGYFQKMKGMERC--KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
L A YFQ+M C PN V+Y L+ ++ VD +L + + E P++ +
Sbjct: 536 LESASFYFQEMV---ECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVES 592
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN V++ K E E + +M P++IT+ LID + ++F +
Sbjct: 593 YNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDME 652
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
K P L T++S+I + +AE + ++M P +T+ +I + +
Sbjct: 653 KRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRID 712
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL-----------------PTEADLLFEN 420
A + + +G T + +L+ L P E D+ FE
Sbjct: 713 HAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEI 772
Query: 421 SHNM-------GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEAL 472
N+ G P TY L + ++L+K M++ G P++ + L
Sbjct: 773 VSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLL 831
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 125/297 (42%), Gaps = 39/297 (13%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+P+++T+N L+ ++ V + + ++ + L+PD++TY ++ + +N +
Sbjct: 237 QPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFG 296
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI---- 332
V RM C P+ +T++ LI+ D+ + + ++ +PT+ T+ I
Sbjct: 297 VFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALC 356
Query: 333 -----------------------------INYGKARLQGKAEY---VFQKMTAMKYTPSF 360
+ G +RL GK E ++ KM P+
Sbjct: 357 AIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRL-GKLEVAIGLYHKMLKEGLVPNT 415
Query: 361 ITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFEN 420
+TY +I S A +IF + G T N +++ C+ G +A +LFE
Sbjct: 416 VTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEK 475
Query: 421 SHNMGVTPDSSTYKLLYKAY-TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
MG P TY L Y TK N+ +LL M++NG P++ + E + FS
Sbjct: 476 MLKMGPLPTVVTYNTLINGYLTKGNVNN-AARLLDLMKENGCEPDEWTYNELVSGFS 531
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 106/242 (43%), Gaps = 4/242 (1%)
Query: 225 ILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSN 284
++++AC + +V E+ +Y+ N ++ K M++ ++ +M ++
Sbjct: 175 LMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNS 234
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
+P ++TFN LI+ K+ + E + + P + T+ S+I+ + + R A
Sbjct: 235 GIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLA 294
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAML 402
VF +M P+ +TY +I G C+ V A ++ +E+ + G + V T +
Sbjct: 295 FGVFDRMVKEGCDPNSVTYSTLIN--GLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPI 352
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
A C EA L G P+ TY L ++ E+ L +M + G+V
Sbjct: 353 TALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLV 412
Query: 463 PN 464
PN
Sbjct: 413 PN 414
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 11/190 (5%)
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N L+ K + + ++K +++S +P+L TFN++I K +AE + ++
Sbjct: 209 NTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQ 268
Query: 354 MKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+P TY +I G+C N+ A +FD + K G D T + ++ C G
Sbjct: 269 YDLSPDVFTYTSLI--LGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRV 326
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEA 471
EA + E G+ P TY L A +E +L+ RM++ G PN
Sbjct: 327 DEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPN------- 379
Query: 472 LETFSSSLAG 481
++T+++ ++G
Sbjct: 380 VQTYTALISG 389
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 9/151 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS L++ + +KG+ A L +M+ G PD +Y +L+ AH K + AL F
Sbjct: 792 YSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHC----KNLEVDHALKIF 847
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+ KG + ++ Y L+ A +A V++ ALF + E D + ++D
Sbjct: 848 HSIEAKGFQL---HLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGL 904
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
K G + +L M+S P+I T+ +L
Sbjct: 905 LKEGELDLCMKLLHIMESKNFTPNIQTYVIL 935
>gi|255556314|ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541506|gb|EEF43055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 719
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 146/314 (46%), Gaps = 5/314 (1%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
L+ + K R A L + G +PD + +N + + D + L F +
Sbjct: 363 LLCCLSSKNMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKGFD-LNEVCNILDRFVE- 420
Query: 211 KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
+GM K TY L++A A V + N F ++ + L ++ +YN V+D + K M
Sbjct: 421 QGM---KFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSM 477
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
+ + + M+ P+++TFN LID Y K K + L+ KP + TF+S
Sbjct: 478 MDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSS 537
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
+I +A+ A F +M +P+ +TY +I +V R+ ++ ++ G
Sbjct: 538 IIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDG 597
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
+ V + NA+++++C G +A LF + ++G+ PD+ TY K + ++ +
Sbjct: 598 INPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAK 657
Query: 451 KLLKRMEQNGIVPN 464
+L ME NG +P+
Sbjct: 658 ELFLSMEANGCMPD 671
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 122/288 (42%), Gaps = 12/288 (4%)
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+K +A+ G K G KP+ T+NI + + ++++V + E +
Sbjct: 369 SKNMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKGFDLNEVCNILDRFVEQGMKFGFS 428
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
TY ++ A G + E ++M + ++ ++N++ID + K DK FK +
Sbjct: 429 TYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKATNTFKEM 488
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+ P L TFN++I Y K K+ + + + P T+ II D +
Sbjct: 489 QYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSII------DGL 542
Query: 377 SRAREI------FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
RA++I F E+ G T N ++ + C+ G + L G+ PD
Sbjct: 543 CRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDV 602
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
++ L +++ + E +KL M G++P+ ++ ++ F S
Sbjct: 603 FSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQS 650
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 88/181 (48%), Gaps = 5/181 (2%)
Query: 135 MQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR 194
M + + D +S +I + + Q A+ FSEM G P+ YN LI H+
Sbjct: 522 MLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILI----HSL 577
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
+ +++ +KM+ + P++ ++N L+++ + V+ LF + L PD
Sbjct: 578 CIIGDVPRSMKLLRKMQ-TDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPD 636
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
YTY + + ++G E + + M++N C PD T N+++D+ K+ F+ +++ K
Sbjct: 637 NYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQKIAK 696
Query: 315 S 315
+
Sbjct: 697 T 697
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/398 (19%), Positives = 154/398 (38%), Gaps = 56/398 (14%)
Query: 129 LEVFRWMQKQRWYIA-DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
L+ + W+ A D + L + +KG L++ L +++ SG R + + LI
Sbjct: 130 LKFYIWVSNMDPLFAKDQSVKGVLANCLYRKGPVVLSVELLKDIKASGYRINEELLCILI 189
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELH 247
+ LAK P+ YN ++ A ++ ++D F+++
Sbjct: 190 GSWGRL-----GLAKYCDEIFGQISFLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMS 244
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
PD +TYN ++ ++G++ E ++ +M+ P++ T+ +LID + + D
Sbjct: 245 ADNCKPDRFTYNILIHGVCRSGVVDEALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVD 304
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA----------EYVFQKMTA---- 353
+ +V +++ K P+ T S I + KA E V Q++
Sbjct: 305 EAFRVLETMKARKVSPSEATIRSFIHGVFRCVAPNKAFELAIEFIEREPVLQRLACDTLL 364
Query: 354 ---------------------MKYTPSFITY----ECIITMYGYCDNVSRAREIFDELSK 388
+ + P T+ C+I + +++ I D +
Sbjct: 365 CCLSSKNMAREAGALLKKFGKIGHKPDSATFNIAMNCLIKGF----DLNEVCNILDRFVE 420
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
G ST A+++A M G TE + F G+ + +Y ++ + K +M +
Sbjct: 421 QGMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDK 480
Query: 449 VQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGS 486
K M+ GI PN L TF++ + G G
Sbjct: 481 ATNTFKEMQYKGIPPN-------LVTFNTLIDGYCKGG 511
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 106/243 (43%), Gaps = 5/243 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I K A F EM+ G P+ +N LI + + K+ + L
Sbjct: 465 YNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKS--RDLLVM 522
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
G KP+I T++ ++ +A+ ++ F E+ L+P+ TYN ++ +
Sbjct: 523 LLEHGF---KPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCI 579
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + +L +M+++ PD+ +FN LI S+ + + +++F S++ P T
Sbjct: 580 IGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYT 639
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ + I + ++ +A+ +F M A P T I+ D A++I S
Sbjct: 640 YVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQKIAKTCS 699
Query: 388 KLG 390
+ G
Sbjct: 700 EWG 702
>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
Length = 453
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 157/351 (44%), Gaps = 20/351 (5%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D+ +++ +I + G + AM LF +M+ SGC+P S +N LI + + +AL K
Sbjct: 82 DSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEAL-KL 140
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
L + Q KPN TYNIL+RA N+++ + ++ S + PD TYN +
Sbjct: 141 LEFLQD----GGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLAR 196
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
AY + G E ++ M + + P+ T +++++ Y K M + + KE
Sbjct: 197 AYAEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKE---GNMVDASRFVFRMKELG 253
Query: 324 TLP---TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
LP FNS+I + + V M P +T+ I+ + + + +
Sbjct: 254 VLPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCK 313
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
EIF+++ K + + + + + Y G P +A+ + + GV P+ + +
Sbjct: 314 EIFNDMVKAEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISGW 373
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDL 491
A E K+ ++M + G+ PN L+T+ + + G G AK L
Sbjct: 374 CSAGKMEHAMKVYEKMCEIGVSPN-------LKTYETLIWG--YGEAKQPL 415
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 151/339 (44%), Gaps = 6/339 (1%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ +++FR M K+ T ++ LI G G+T A+ L +++ G +P+ YN L
Sbjct: 101 EAMKLFRKM-KESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGGVKPNQRTYNIL 159
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
+ A + + +A + Y GM+ P+ VTYN L RA A+ + + E+
Sbjct: 160 VRAWCNKENMEEAWN--MVYKMVASGMQ---PDAVTYNTLARAYAEKGETIRAEEMILEM 214
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
+ P+ T + +++ Y K G + + + RMK P++ FN LI +
Sbjct: 215 LNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPNLFVFNSLIKGFLDTMDT 274
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
+ +++V + + +P + TF++++ + A K + +F M + P + +
Sbjct: 275 EGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFNDMVKAEIEPDIHAFSIL 334
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
Y +A I + K G V ++ +C G A ++E +GV
Sbjct: 335 AKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISGWCSAGKMEHAMKVYEKMCEIGV 394
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+P+ TY+ L Y +A ++LL+ ME+ G+ P K
Sbjct: 395 SPNLKTYETLIWGYGEAKQPLKAEELLQVMEEKGVFPKK 433
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 117/262 (44%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
KP ++TY L+ A + + + L ++ E+ + PD +N +++A+ ++G +KE
Sbjct: 45 KPTLITYTTLVAALTRQKLFKSILRLISKVEENGMKPDSILFNSIINAFSESGNMKEAMK 104
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+ +MK + CKP TFN LI YG ++ ++ + L KP T+N ++ +
Sbjct: 105 LFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGGVKPNQRTYNILVRAWC 164
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
+A + KM A P +TY + Y RA E+ E+
Sbjct: 165 NKENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAEKGETIRAEEMILEMLNRRVTPNER 224
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
T + ++ YC G +A +GV P+ + L K + E V ++L M
Sbjct: 225 TCSIIVNGYCKEGNMVDASRFVFRMKELGVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLM 284
Query: 457 EQNGIVPNKRFFLEALETFSSS 478
E+NG+ P+ F + +SS+
Sbjct: 285 EENGVRPDVVTFSTIMNAWSSA 306
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 152/318 (47%), Gaps = 7/318 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+A + ++ + + L S++ +G +PD ++N++I A + + + +A+ F
Sbjct: 51 YTTLVAALTRQKLFKSILRLISKVEENGMKPDSILFNSIINAFSESGN----MKEAMKLF 106
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+KMK CKP T+N L++ A ++ L + L + + P+ TYN ++ A+
Sbjct: 107 RKMK-ESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGGVKPNQRTYNILVRAWCN 165
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
++E +++ +M ++ +PD +T+N L +Y ++ + E++ +++ + P T
Sbjct: 166 KENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAEKGETIRAEEMILEMLNRRVTPNERT 225
Query: 328 FNSMIINYGK-ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
+ ++ Y K + + +VF +M + P+ + +I + + E+ +
Sbjct: 226 CSIIVNGYCKEGNMVDASRFVF-RMKELGVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLM 284
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
+ G V T + ++ A+ G + +F + + PD + +L K Y +A
Sbjct: 285 EENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFNDMVKAEIEPDIHAFSILAKGYVRAGEP 344
Query: 447 ELVQKLLKRMEQNGIVPN 464
E + +L M + G+ PN
Sbjct: 345 EKAESILTSMRKYGVHPN 362
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 124/272 (45%), Gaps = 5/272 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ L +KG+T A + EM N P+ + ++ + K + A
Sbjct: 187 DAVTYNTLARAYAEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYC----KEGNMVDA 242
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ +MK + PN+ +N L++ + + V+ + + E+ + PD+ T++ +M+
Sbjct: 243 SRFVFRMKEL-GVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMN 301
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
A+ G + + + + + M + +PDI F++L Y + +K E + S+ P
Sbjct: 302 AWSSAGRMDKCKEIFNDMVKAEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHP 361
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ ++I + A A V++KM + +P+ TYE +I YG +A E+
Sbjct: 362 NVVICTTVISGWCSAGKMEHAMKVYEKMCEIGVSPNLKTYETLIWGYGEAKQPLKAEELL 421
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
+ + G K T+ + +A+ GL +E++
Sbjct: 422 QVMEEKGVFPKKGTMQLIADAWRAIGLLSESE 453
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 112/242 (46%)
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+ +++F L + P + TY ++ A + + K + ++S+++ N KPD I FN +I
Sbjct: 31 EAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENGMKPDSILFNSII 90
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
+++ + + ++F+ + S KPT TFN++I YG A +A + + +
Sbjct: 91 NAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGGVK 150
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P+ TY ++ + +N+ A + ++ G T N + AY G A+ +
Sbjct: 151 PNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAEKGETIRAEEM 210
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
N VTP+ T ++ Y K + + RM++ G++PN F ++ F
Sbjct: 211 ILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPNLFVFNSLIKGFLD 270
Query: 478 SL 479
++
Sbjct: 271 TM 272
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 91/206 (44%)
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
+M+ G +E S+ + + KP +IT+ L+ + +++ F + ++ + +
Sbjct: 19 LMNVLIGKGKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENG 78
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
KP FNS+I + ++ +A +F+KM P+ T+ +I YG A
Sbjct: 79 MKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEAL 138
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
++ + L G T N ++ A+C EA + G+ PD+ TY L +AY
Sbjct: 139 KLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAY 198
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKR 466
+ ++++ M + PN+R
Sbjct: 199 AEKGETIRAEEMILEMLNRRVTPNER 224
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%)
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G P EA +F + + G P TY L A T+ + + + +L+ ++E+NG+ P+ F
Sbjct: 27 GKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENGMKPDSILF 86
Query: 469 LEALETFSSS 478
+ FS S
Sbjct: 87 NSIINAFSES 96
>gi|449469499|ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
gi|449487784|ref|XP_004157799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
Length = 502
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 158/359 (44%), Gaps = 17/359 (4%)
Query: 134 WMQKQRWYIADTGIYSKLIAVMGKK----GQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
W R G SK A++ ++ G+ A+ +F MR GC D +N +
Sbjct: 132 WALVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSMREHGCPQDLHSFNTI--- 188
Query: 190 HLHTRDKAKALAKALG-YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
L K+K + A F+ ++G + K ++V+YNI+ + + + KE+ E
Sbjct: 189 -LDILCKSKRVEMAYNNLFKVLRG--KFKADVVSYNIIANGWCLIKRTPKALEVLKEMVE 245
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
L P I TYN ++ Y + G +KE +MK + + D++T+ ++ +G +
Sbjct: 246 RGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKR 305
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+VF ++ P+ T+N+MI K A +F++M Y P+ TY +I
Sbjct: 306 ARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIR 365
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
+ N+ +A E + + G + V T N + +C G + +FE G P
Sbjct: 366 GLFHAGNMDKAMEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKGLSMFEKM-GQGSLP 424
Query: 429 DSSTYKLLYKA-YTKANMKELV--QKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQS 484
+ TY +L A + + ++LV KLL M G +P K F L L G+Q+
Sbjct: 425 NLDTYNVLISAMFVRKKSEDLVVAGKLLLEMVDRGFIPRKFTFNRVLNGL--LLTGNQA 481
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 97/206 (47%), Gaps = 13/206 (6%)
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
F K+R D Y+ ++ G G+ + A +F+EM G P + YNA+I
Sbjct: 274 FFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLC 333
Query: 192 HTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
K ++ A+ F++M KG PN+ TYN+++R A N+D+ + +
Sbjct: 334 ----KKDSVENAVLMFEEMVKKGYV---PNLTTYNVVIRGLFHAGNMDKAMEFIERMKTD 386
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
P++ TYN + + G +++ S+ +M P++ T+N+LI + R+ + +
Sbjct: 387 GCEPNVQTYNVAIRYFCDAGDVEKGLSMFEKMGQGSL-PNLDTYNVLISAMFVRKKSEDL 445
Query: 310 EQVFKSLMHSKEKPTLP---TFNSMI 332
K L+ ++ +P TFN ++
Sbjct: 446 VVAGKLLLEMVDRGFIPRKFTFNRVL 471
>gi|410110109|gb|AFV61134.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
diamantinensis]
Length = 363
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 124/255 (48%), Gaps = 5/255 (1%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ +FS ++ SG PD YNA+I KAK +A +MK PN +Y
Sbjct: 5 AISIFSRLKRSGFTPDLVAYNAMINVF----GKAKLFREARSLISEMK-TAGVMPNTTSY 59
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
+ LL + + + +F E+ E D+ T N ++D YG+ GM KE + + M+
Sbjct: 60 STLLTMYVENKKFLEALXVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 119
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+P+++++N L+ YG + F + +F+ + + + T+NSM++ YGK K
Sbjct: 120 MGIEPNVVSYNTLLRVYGDAELFGESIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEK 179
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A + Q+M + P+ ITY II+++G + RA +F +L G ++ M+
Sbjct: 180 ANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQILFQTMIV 239
Query: 404 AYCMNGLPTEADLLF 418
AY GL A L
Sbjct: 240 AYERAGLIAHAKRLL 254
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 148/323 (45%), Gaps = 19/323 (5%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L SEM+ +G P+ + Y+ L+T ++
Sbjct: 13 KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVEN--- 69
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
K +AL F +M+ + +C ++ T NI++ Q + + LF + + + P++
Sbjct: 70 -KKFLEALXVFSEMREI-KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVV 127
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+YN ++ YG + E + M+ + +++T+N ++ YGK +K + + +
Sbjct: 128 SYNTLLRVYGDAELFGESIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEM 187
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P T++++I +GK +A +FQK+ + I ++ +I Y +
Sbjct: 188 QSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQILFQTMIVAYERAGLI 247
Query: 377 SRAREIFDELSK---LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ A+ + EL + + +D + L G EA +F + + G D + +
Sbjct: 248 AHAKRLLHELKRPDNIPRDTAIHILAGA-------GRIEEATYVFRQAIDAGEVKDITVF 300
Query: 434 K----LLYKAYTKANMKELVQKL 452
+ LL K AN+ E+ K+
Sbjct: 301 ERMIHLLSKYKKYANVVEVFDKM 323
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 129/263 (49%), Gaps = 1/263 (0%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+KA+ F ++K P++V YN ++ +A+ + +L E+ + + P+ +Y+
Sbjct: 3 SKAISIFSRLK-RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYST 61
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ Y +N E V S M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 62 LLTMYVENKKFLEALXVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 121
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P + ++N+++ YG A L G++ ++F+ M + +TY ++ +YG +A
Sbjct: 122 IEPNVVSYNTLLRVYGDAELFGESIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 181
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ E+ G + T + ++ + G A +LF+ + GV D ++ + AY
Sbjct: 182 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQILFQTMIVAY 241
Query: 441 TKANMKELVQKLLKRMEQNGIVP 463
+A + ++LL +++ +P
Sbjct: 242 ERAGLIAHAKRLLHELKRPDNIP 264
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 128/301 (42%), Gaps = 37/301 (12%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
++ K+L+ L VF M++ + + D + +I V G+ G + A LF MR G P+
Sbjct: 68 ENKKFLEALXVFSEMREIKCLL-DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 126
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
YN L L A+ +++ F+ M+ + + N+VTYN ++ + ++ N
Sbjct: 127 VSYNTL----LRVYGDAELFGESIHLFRLMQ-RKNIEQNVVTYNSMMMIYGKTLEHEKAN 181
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
L +E+ + P+ TY+ ++ +GK G + + +++S + D I F +I +Y
Sbjct: 182 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQILFQTMIVAY 241
Query: 301 --------GKRQAFD--------------------KMEQ---VFKSLMHSKEKPTLPTFN 329
KR + ++E+ VF+ + + E + F
Sbjct: 242 ERAGLIAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFE 301
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
MI K + VF KM + Y P ++ YG +A +++ E+ ++
Sbjct: 302 RMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQEV 361
Query: 390 G 390
G
Sbjct: 362 G 362
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+ K +F L S P L +N+MI +GKA+L +A + +M P+ +Y
Sbjct: 2 YSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYST 61
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
++TMY A +F E+ ++ + ++T N M++ Y G+ EAD LF MG
Sbjct: 62 LLTMYVENKKFLEALXVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 121
Query: 426 VTPDSSTYKLLYKAYTKA-------NMKELVQKLLKRMEQNGIVPN 464
+ P+ +Y L + Y A ++ L+Q+ K +EQN + N
Sbjct: 122 IEPNVVSYNTLLRVYGDAELFGESIHLFRLMQR--KNIEQNVVTYN 165
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 86/189 (45%)
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
S+ SR+K + PD++ +N +I+ +GK + F + + + + P ++++++ Y
Sbjct: 7 SIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMY 66
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
+ + +A VF +M +K T +I +YG A ++F + K+G + V
Sbjct: 67 VENKKFLEALXVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 126
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+ N +L Y L E+ LF + + TY + Y K E L++
Sbjct: 127 VSYNTLLRVYGDAELFGESIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 186
Query: 456 MEQNGIVPN 464
M+ GI PN
Sbjct: 187 MQSRGIEPN 195
>gi|298204410|emb|CBI16890.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 159/347 (45%), Gaps = 16/347 (4%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ + I++ LI K G A L +EM + PD YN LI+ + K
Sbjct: 219 VPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYC----KKGMHY 274
Query: 202 KALGYFQKMKGMER--CKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTY 258
+ALG +M ER P+IVTYN L+ C + ++++ L + + L P + TY
Sbjct: 275 EALGIQDRM---ERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEVEGLHPGVVTY 331
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N ++ + G IK+ +L+ M + +PD +T N LI++Y K +V K ++
Sbjct: 332 NSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLE 391
Query: 319 SKEKPTLPTFNSMIINYGKAR-LQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
+ KP TF ++I + K + E++F+ + A ++PS+ TY ++ Y DN
Sbjct: 392 AGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDA-GFSPSYSTYSWLVDSYYDQDNKE 450
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
+ DELS+ G + +S A++ C A+ +F G+ DS Y L
Sbjct: 451 AVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLA 510
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQS 484
AY KA +L M++ ++ L+ FS+S AG S
Sbjct: 511 YAYFKAGKAIAASDMLDEMDKRRLMIT----LKIYRCFSASYAGDGS 553
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 144/330 (43%), Gaps = 19/330 (5%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA--------- 201
+I + K Q + A L + PSV NA++ H ++ L+
Sbjct: 106 MIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYANS 165
Query: 202 ----KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
A+ F+ M+ + KP++ +LL + A+AR + V ++K++ + P+I+
Sbjct: 166 RMTQDAIQVFEHMR-VHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHI 224
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
+N ++ A K+G +++ E +L+ M+S PD+ T+N LI Y K+ + + +
Sbjct: 225 FNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRME 284
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT---PSFITYECIITMYGYCD 374
P + T+NS+I YG R E + M+ P +TY I+
Sbjct: 285 RGGVSPDIVTYNSLI--YGFCREVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEG 342
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
+ A + +E+S+ + T N ++ AYC G A + + G+ PD T+K
Sbjct: 343 KIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFK 402
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L + K + + ++ L M G P+
Sbjct: 403 ALIHGFCKLHEVDSAKEFLFEMLDAGFSPS 432
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 158/365 (43%), Gaps = 36/365 (9%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
LE+F M + + Y+ +I K G A ++++M+N P N+LI
Sbjct: 349 LELFDKMN-ENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIR 407
Query: 189 AHLHTR---------DKAKA---------------------LAKALGYFQKM--KGMERC 216
+L R D+A A +++A ++KM KG+
Sbjct: 408 GYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGV--- 464
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+P++V+YN ++ Q ++D N +F E+ E L P++ TY+ +MD Y K G +
Sbjct: 465 RPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFG 524
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+ RM+ P T N++I+ K + + K L+ PT T+N +I +
Sbjct: 525 LYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFV 584
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
K A V+ +M + +P+ TY +I + +N+ A ++ DE+ G ++ V+
Sbjct: 585 KEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVT 644
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
A+++ +C G A L +G++P+ Y + + K E L KRM
Sbjct: 645 VYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRM 704
Query: 457 EQNGI 461
GI
Sbjct: 705 INEGI 709
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 146/325 (44%), Gaps = 16/325 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D YS +I + KK + A+ L EMR+ G P ++ +I + +A+
Sbjct: 258 DARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAV--- 314
Query: 204 LGYFQKMKG-MERC-KP-NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
K+KG M C KP N+V L++ + ++D LF +++E+ + P+ TY
Sbjct: 315 -----KVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAV 369
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
+++ KNG + + + ++MK+ P + N LI Y K ++ ++ ++F +
Sbjct: 370 IIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACG 429
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSR 378
T+NS++ K +A +++KM PS ++Y +I G+C ++
Sbjct: 430 IANVF-TYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMI--LGHCQQGDMDS 486
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A +F E+ + G + T + +++ Y G A L++ + P T ++
Sbjct: 487 ANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIIN 546
Query: 439 AYTKANMKELVQKLLKRMEQNGIVP 463
KA Q LK++ Q G +P
Sbjct: 547 GLCKAGRTSESQDRLKKLVQEGFIP 571
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 158/368 (42%), Gaps = 13/368 (3%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ E + K + L + R M+ + W + I++++I V K+G+ A+ + EM +
Sbjct: 264 IVIEAVCKKPDSVAALGLLREMRDKGW-VPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLS 322
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G + V L+ + D L AL F KM C PN VTY +++ C +
Sbjct: 323 CGKPMNVVVATTLMKGYCKQGD----LDSALELFDKMNENGIC-PNNVTYAVIIEWCCKN 377
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK-PDIIT 292
N+D+ ++ ++ ++P ++ N ++ Y K +E + ++ C ++ T
Sbjct: 378 GNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFD--EAVACGIANVFT 435
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N L+ K + +++ ++ +P++ ++N+MI+ + + A VF +M
Sbjct: 436 YNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEML 495
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS--TLNAMLEAYCMNGL 410
P+ ITY ++ Y + A ++D + G+++ S T N ++ C G
Sbjct: 496 EKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMR--GENIAPSDFTCNIIINGLCKAGR 553
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
+E+ + G P TY + + K + M + G+ PN +
Sbjct: 554 TSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTN 613
Query: 471 ALETFSSS 478
+ F S
Sbjct: 614 LINGFCKS 621
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 128/316 (40%), Gaps = 5/316 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I ++G A +F EM G +P+ Y+ L+ + D A G +
Sbjct: 471 YNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAF----GLY 526
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M+G E P+ T NI++ +A + K+L + P TYN ++D + K
Sbjct: 527 DRMRG-ENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVK 585
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + +V + M P++ T+ LI+ + K D +V + + + +
Sbjct: 586 EGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTV 645
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+ ++I + + A + ++ + +P+ + Y +I+ + N+ A + +
Sbjct: 646 YCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMI 705
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
G + ++ G A L+ G+ PD TY +L E
Sbjct: 706 NEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLE 765
Query: 448 LVQKLLKRMEQNGIVP 463
QK+L+ M++ + P
Sbjct: 766 NAQKILEDMDRKCMTP 781
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 134/338 (39%), Gaps = 56/338 (16%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL------HTRDKAKALA 201
YS L+ KKG T A L+ MR P N +I ++D+ K L
Sbjct: 506 YSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLV 565
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+ G+ P +TYN ++ + +V+ A++ E+ + ++P+++TY +
Sbjct: 566 QE-GFI----------PTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNL 614
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
++ + K+ + V+ MK+ + D+ + LID + ++ Q+ L
Sbjct: 615 INGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGL 674
Query: 322 KPTLPTFNSMI-------------------INYG-KARLQ------------GK---AEY 346
P ++SMI IN G LQ GK A
Sbjct: 675 SPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASE 734
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
++ +M A P ITY +I +G C+ + A++I +++ + V N ++
Sbjct: 735 LYAEMLAKGIMPDLITYSVLI--HGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITG 792
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+ G EA L + G+ PD +TY +L K
Sbjct: 793 HFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVK 830
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 101/242 (41%)
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
+N LL + + + ++ F L E + P + N + KN MI+E V ++M
Sbjct: 156 VFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKM 215
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
S K D T +++I + + ++ E F+ + + ++ +I K
Sbjct: 216 ASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDS 275
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
A + ++M + P + + +I + + A ++ E+ GK M V +
Sbjct: 276 VAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTL 335
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
++ YC G A LF+ + G+ P++ TY ++ + K + ++ +M+ I
Sbjct: 336 MKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDI 395
Query: 462 VP 463
P
Sbjct: 396 SP 397
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 78/189 (41%), Gaps = 36/189 (19%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA-----------HLH 192
D +Y LI +KG A L SE++ G P+ VY+++I+ HLH
Sbjct: 642 DVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLH 701
Query: 193 TRDKAKALAKALGYFQKM----------------------KGMERCKPNIVTYNILLRAC 230
R + + L + + KG+ P+++TY++L+
Sbjct: 702 KRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGI---MPDLITYSVLIHGL 758
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
++ + +++ + P ++ YN ++ + K G ++E + + M PD
Sbjct: 759 CNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDD 818
Query: 291 ITFNLLIDS 299
T+++L++
Sbjct: 819 TTYDILVNG 827
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 163/418 (38%), Gaps = 84/418 (20%)
Query: 122 SDKW--LQCLEVFRWMQKQRW--YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
SD W + + V R ++ R + +D+ +++ L+ K + A+ F+ +
Sbjct: 127 SDDWGPVPSVVVARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIV 186
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARN 235
P +V N ++ + K + +A + KM KG+ K + T ++++RA +
Sbjct: 187 PCLTVMNIFLSELV----KNNMIREARDVYNKMASKGV---KGDCATISVMIRASMREGK 239
Query: 236 VDQVNALFKELHESILAPDIYTYNGVMDAYGKN-------GMIKEM--------ESVLSR 280
+++ F+E + D Y+ V++A K G+++EM E + +R
Sbjct: 240 LEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTR 299
Query: 281 -----MKSNQ-------------C-KP-DIITFNLLIDSYGKR-------QAFDKME--- 310
MK + C KP +++ L+ Y K+ + FDKM
Sbjct: 300 VIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENG 359
Query: 311 -------------------------QVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
+++ + + PT+ NS+I Y KAR +A
Sbjct: 360 ICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEAS 419
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+F + A F TY +++ +S A I++++ + G V + N M+ +
Sbjct: 420 KLFDEAVACGIANVF-TYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGH 478
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
C G A+ +F G+ P+ TY +L Y K E L RM I P
Sbjct: 479 CQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAP 536
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
D IY+ LI+ + K+G+ A L++EM G PD Y+ LI H L
Sbjct: 711 CDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLI----HGLCNKGQLEN 766
Query: 203 ALGYFQKMKGMERC-KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
A + M +C P + YN L+ + N+ + L E+ + L PD TY+ +
Sbjct: 767 AQKILEDMD--RKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDIL 824
Query: 262 MDAYGKNG 269
++ K+G
Sbjct: 825 VNGKVKDG 832
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 61/146 (41%)
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
FN ++ +Y K + A F + P ++ + + AR++++++
Sbjct: 156 VFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKM 215
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
+ G +T++ M+ A G EA+ F + N GV D+ Y ++ +A K
Sbjct: 216 ASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDS 275
Query: 447 ELVQKLLKRMEQNGIVPNKRFFLEAL 472
LL+ M G VP++ F +
Sbjct: 276 VAALGLLREMRDKGWVPHEVIFTRVI 301
>gi|449447783|ref|XP_004141647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Cucumis sativus]
Length = 1020
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 164/370 (44%), Gaps = 46/370 (12%)
Query: 145 TGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKAL 204
T Y+ LI + GK G+ + A +F EM +G D +N +I +T LA+A
Sbjct: 321 TSTYNTLIDLYGKAGRLKDAANVFGEMLTTGISMDTITFNTMI----YTCGSHGHLAEAE 376
Query: 205 GYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
KM+ ER P+ TYNI L A N+D ++ + E L PD+ T+ ++
Sbjct: 377 TLLLKME--ERGLSPDTKTYNIFLSLYANNGNIDGALKCYRRIREVGLFPDVVTHRALLH 434
Query: 264 AYGKNGMIKEMESVLSRMKSNQCK------PDIITFNL---------------------- 295
+ M++++E+V++ M+ + P +I +
Sbjct: 435 VLSERNMVEDVENVIAEMEKSHILLDEHSLPRVIKMYINEGLLDRAKILLEKYRLDTELS 494
Query: 296 ------LIDSYGKRQAFDKMEQVF---KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
+ID+Y ++ + + E +F + L S +K + +N MI YGKA L KA
Sbjct: 495 PRISAAIIDAYAEKGLWFEAESIFLWKRDL--SGKKMDVMEYNVMIKAYGKAELYEKAFL 552
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+F+ M P TY +I M+ D V AR + E+ ++G T +A++ +Y
Sbjct: 553 LFKSMKNRGTWPDECTYNSLIQMFSGGDLVDEARRLLTEMQRMGFKPTCQTFSAVIASYA 612
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
GL ++A +++ + V P+ Y +L + + E K + ME++GI N+
Sbjct: 613 RLGLMSDAVEVYDMMVHADVEPNEILYGVLVNGFAEIGQAEEALKYFRLMEKSGIAENQI 672
Query: 467 FFLEALETFS 476
++ FS
Sbjct: 673 VLTSLIKAFS 682
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/368 (20%), Positives = 152/368 (41%), Gaps = 60/368 (16%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L + +W + ++VF+W + Q+ Y+ + Y+ ++ +G+ + ++EM +G P
Sbjct: 135 LKEQSRWERVIQVFQWFKSQKDYVPNVIHYNIVLRTLGQAQKWDELRLCWNEMAENGVVP 194
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
+ Y LI + K + +AL + + M + P+ VT N ++R A D
Sbjct: 195 TNNTYGMLIDVY----GKVGLVKEALLWIKHMT-VRGIFPDEVTMNTVVRVLKDAGEFDS 249
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNG----------MIKEMESVLSRMKSNQCKP 288
+ +K+ ++ + + N ++ +G N ++ E+ + +R+ + + P
Sbjct: 250 ADKFYKDWCRGLVELNDFDLNSRVEDFGVNSAVEPITPKHFLLTELFRIGTRIPNRKVSP 309
Query: 289 DII----------TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
++ T+N LID YGK VF ++ + TFN+MI G
Sbjct: 310 EVDNCVRKPRLTSTYNTLIDLYGKAGRLKDAANVFGEMLTTGISMDTITFNTMIYTCGSH 369
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
+AE + KM +P TY +++Y N+ A + + + ++G
Sbjct: 370 GHLAEAETLLLKMEERGLSPDTKTYNIFLSLYANNGNIDGALKCYRRIREVG-------- 421
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
LF PD T++ L ++ NM E V+ ++ ME+
Sbjct: 422 ------------------LF---------PDVVTHRALLHVLSERNMVEDVENVIAEMEK 454
Query: 459 NGIVPNKR 466
+ I+ ++
Sbjct: 455 SHILLDEH 462
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/319 (19%), Positives = 130/319 (40%), Gaps = 6/319 (1%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
W + +F W + D Y+ +I GK A LF M+N G PD YN
Sbjct: 511 WFEAESIFLWKRDLSGKKMDVMEYNVMIKAYGKAELYEKAFLLFKSMKNRGTWPDECTYN 570
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
+LI D + L Q+M KP T++ ++ + A+ + ++
Sbjct: 571 SLIQM-FSGGDLVDEARRLLTEMQRMG----FKPTCQTFSAVIASYARLGLMSDAVEVYD 625
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
+ + + P+ Y +++ + + G +E M+ + + I LI ++ K
Sbjct: 626 MMVHADVEPNEILYGVLVNGFAEIGQAEEALKYFRLMEKSGIAENQIVLTSLIKAFSKVG 685
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
+ + +++ + + ++ NSMI Y + +A+ VF+ + Y +++
Sbjct: 686 SLEDARRIYNRMKNMEDGADTIASNSMINLYADLGMVSEAKQVFEDLRERGYADG-VSFA 744
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
+I +Y + A E+ +E+ + G ++ ++E Y +NG E L
Sbjct: 745 TMIYLYKNIGMLDEAIEVAEEMKESGLLRDATSFRKVIECYAINGQVRECGELLHEMVTR 804
Query: 425 GVTPDSSTYKLLYKAYTKA 443
+ PD+ T+ +L+ K
Sbjct: 805 KLLPDNRTFNVLFTILKKG 823
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 117/260 (45%), Gaps = 1/260 (0%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
K +++ YN++++A +A ++ LFK + PD TYN ++ + ++ E
Sbjct: 528 KMDVMEYNVMIKAYGKAELYEKAFLLFKSMKNRGTWPDECTYNSLIQMFSGGDLVDEARR 587
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+L+ M+ KP TF+ +I SY + +V+ ++H+ +P + ++ +
Sbjct: 588 LLTEMQRMGFKPTCQTFSAVIASYARLGLMSDAVEVYDMMVHADVEPNEILYGVLVNGFA 647
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
+ +A F+ M + I +I + ++ AR I++ + +
Sbjct: 648 EIGQAEEALKYFRLMEKSGIAENQIVLTSLIKAFSKVGSLEDARRIYNRMKNMEDGADTI 707
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
N+M+ Y G+ +EA +FE+ G S ++Y Y M + ++ + M
Sbjct: 708 ASNSMINLYADLGMVSEAKQVFEDLRERGYADGVSFATMIY-LYKNIGMLDEAIEVAEEM 766
Query: 457 EQNGIVPNKRFFLEALETFS 476
+++G++ + F + +E ++
Sbjct: 767 KESGLLRDATSFRKVIECYA 786
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 137/332 (41%), Gaps = 57/332 (17%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIY-SKLIAVMGKKGQTRLAMWLFSEMRNS 174
F E+G+++ + L+ FR M+K IA+ I + LI K G A +++ M+N
Sbjct: 646 FAEIGQAE---EALKYFRLMEKSG--IAENQIVLTSLIKAFSKVGSLEDARRIYNRMKNM 700
Query: 175 GCRPDPSVYNALIT--AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
D N++I A L +AK + F+ ++ ER + V++ ++
Sbjct: 701 EDGADTIASNSMINLYADLGMVSEAKQV------FEDLR--ERGYADGVSFATMIYLYKN 752
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+D+ + +E+ ES L D ++ V++ Y NG ++E +L M + + PD T
Sbjct: 753 IGMLDEAIEVAEEMKESGLLRDATSFRKVIECYAINGQVRECGELLHEMVTRKLLPDNRT 812
Query: 293 FNLLIDSYGK----------------------RQAFDKMEQVFKSL-MHSKEKPTLPTF- 328
FN+L K RQA + VF L +H+ + TF
Sbjct: 813 FNVLFTILKKGVIPLEAVSQLESAFHEEKTYARQAI--IAAVFSGLGLHASALESCDTFL 870
Query: 329 -----------NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
N I YG A KA +F KM P +TY ++ YG +
Sbjct: 871 KAEVQLDSFAYNVAIYAYGAAEKIDKALNIFMKMKDQNLKPDLVTYINLVGCYGKAGMIE 930
Query: 378 RAREIFDELS----KLGKDMKVSTLNAMLEAY 405
++I+ +L +L K + + +N A+
Sbjct: 931 GVKQIYSQLKYGEIELNKSLFFAIINTFRSAH 962
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 93/226 (41%), Gaps = 32/226 (14%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L++ +G D + +EV M K+ + D + K+I GQ R L EM
Sbjct: 749 LYKNIGMLD---EAIEVAEEM-KESGLLRDATSFRKVIECYAINGQVRECGELLHEMVTR 804
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK--------------------GME 214
PD +N L T +A+++ F + K +E
Sbjct: 805 KLLPDNRTFNVLFTILKKGVIPLEAVSQLESAFHEEKTYARQAIIAAVFSGLGLHASALE 864
Query: 215 RCKP--------NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
C + YN+ + A A +D+ +F ++ + L PD+ TY ++ YG
Sbjct: 865 SCDTFLKAEVQLDSFAYNVAIYAYGAAEKIDKALNIFMKMKDQNLKPDLVTYINLVGCYG 924
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
K GMI+ ++ + S++K + + + F +I+++ +D ++ V
Sbjct: 925 KAGMIEGVKQIYSQLKYGEIELNKSLFFAIINTFRSAHRYDLVQMV 970
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 161/368 (43%), Gaps = 36/368 (9%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALA 201
D Y+ LI+ + K G+ A+ + +M + C P+ YNA+I++ D+A +A
Sbjct: 342 DIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIA 401
Query: 202 K-----------------------------ALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
+ A+ F++MKG + C+P+ TYN+L+ +
Sbjct: 402 RLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKG-KGCRPDEFTYNMLIDSLCS 460
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+R +++ L KE+ + A ++ YN ++D + KN I+E E + M+ D +T
Sbjct: 461 SRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVT 520
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N LID K + + Q+ ++ +P T+NS++ ++ K KA + Q MT
Sbjct: 521 YNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMT 580
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ P +TY +I+ V A + + G + N +++A
Sbjct: 581 SSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTH 640
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKAN--MKELVQKLLKRMEQNGIVPNKRFFL- 469
EA LF + PD+ TYK++Y+ + E V ++ +E+ I F +
Sbjct: 641 EAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVML 700
Query: 470 -EALETFS 476
E L T S
Sbjct: 701 AEGLCTLS 708
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 144/353 (40%), Gaps = 32/353 (9%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL--- 200
D ++ LI + K Q R A+ + EM + G PD + + ++ ++ + AL
Sbjct: 202 DVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIK 261
Query: 201 ----------------------------AKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
+AL + Q+ E +P+ TYN L+ +
Sbjct: 262 EQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVS-EGFRPDQFTYNTLVNGLCK 320
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+ + + L PDIYTYN ++ K G I+E +L +M S C P+ +T
Sbjct: 321 IGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVT 380
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N +I S K D+ ++ + L P + TFNS+I + A +F++M
Sbjct: 381 YNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMK 440
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
P TY +I + A + E+ G V N +++ +C N
Sbjct: 441 GKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIE 500
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
EA+ +F+ GV+ DS TY L K+ E +L+ +M G+ P+K
Sbjct: 501 EAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDK 553
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 145/321 (45%), Gaps = 9/321 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ L+ + K G + AM + M G PD YN+LI+ K + +A
Sbjct: 307 DQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLC----KLGEIEEA 362
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ +M + C PN VTYN ++ + + VD+ + + L + PD+ T+N ++
Sbjct: 363 VKILDQMVSRD-CSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQ 421
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ K + MK C+PD T+N+LIDS + ++ + K + +
Sbjct: 422 GLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCAR 481
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRARE 381
+ +N++I + K + +AE +F +M + +TY +I G C + V A +
Sbjct: 482 NVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLID--GLCKSKRVEDAAQ 539
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ D++ G T N++L +C G +A + + + G PD TY L
Sbjct: 540 LMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLC 599
Query: 442 KANMKELVQKLLKRMEQNGIV 462
KA ++ +LL+ ++ G+V
Sbjct: 600 KAGRVQVASRLLRSIQMKGMV 620
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/431 (21%), Positives = 163/431 (37%), Gaps = 74/431 (17%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L E L + + L VF W KQ ++ + +Y +++ +GK G + EM+ S
Sbjct: 67 LIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLS 126
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN--------------- 219
GC D ++ + ++ K + + +G + M+ R KP+
Sbjct: 127 GCEFDRGIFLIFVESY----GKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDAN 182
Query: 220 --------------------IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
+ T+NIL++A +A V + +E+ L+PD T+
Sbjct: 183 KLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFT 242
Query: 260 GVMDAY-----------------------------------GKNGMIKEMESVLSRMKSN 284
+M Y K G I + S + S
Sbjct: 243 TIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSE 302
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
+PD T+N L++ K +V +++ P + T+NS+I K +A
Sbjct: 303 GFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEA 362
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
+ +M + +P+ +TY II+ + V A EI L+ G V T N++++
Sbjct: 363 VKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQG 422
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
C++ A LFE G PD TY +L + + E LLK ME NG N
Sbjct: 423 LCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARN 482
Query: 465 KRFFLEALETF 475
+ ++ F
Sbjct: 483 VVIYNTLIDGF 493
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 150/342 (43%), Gaps = 11/342 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ L K ++ + E+ R + + + D ++ LI + + AM LF EM+
Sbjct: 384 IISSLCKENRVDEATEIARLLT-SKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGK 442
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GCRPD YN LI + +R L +AL ++M+ + C N+V YN L+ + +
Sbjct: 443 GCRPDEFTYNMLIDSLCSSR----KLEEALNLLKEME-LNGCARNVVIYNTLIDGFCKNK 497
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+++ +F E+ ++ D TYN ++D K+ +++ ++ +M +PD T+N
Sbjct: 498 RIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYN 557
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA-RLQGKAEYVFQ-KMT 352
L+ + K K + +++ S P + T+ ++I KA R+Q + + +M
Sbjct: 558 SLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMK 617
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
M TP Y +I + A +F E+ + T + C G P
Sbjct: 618 GMVLTPH--AYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPI 675
Query: 413 EADLLFENSH-NMGVTPDSSTYKLLYKAYTKANMKELVQKLL 453
+ F G P+ S++ +L + +M + + KL+
Sbjct: 676 GEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLV 717
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 132/319 (41%), Gaps = 15/319 (4%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL---HTRDKAKALAKALGYF 207
LI K+G+ A+ E + G RPD YN L+ H + + + L
Sbjct: 279 LINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAML--- 335
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ G++ P+I TYN L+ + +++ + ++ +P+ TYN ++ + K
Sbjct: 336 --LGGLD---PDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCK 390
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ E + + S PD+ TFN LI +F+ + +P T
Sbjct: 391 ENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFT 450
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDE 385
+N +I + +R +A + ++M + + Y +I G+C N + A EIFDE
Sbjct: 451 YNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLID--GFCKNKRIEEAEEIFDE 508
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ G T N +++ C + +A L + G+ PD TY L + K
Sbjct: 509 MELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGD 568
Query: 446 KELVQKLLKRMEQNGIVPN 464
+ +++ M +G P+
Sbjct: 569 IKKAADIVQTMTSSGCNPD 587
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 154/322 (47%), Gaps = 14/322 (4%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
IY+ L+ + K G + A LF M G PD Y+ +I + K++ +A+A
Sbjct: 685 IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC----KSENVAEAFSL 740
Query: 207 FQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
F +M KG++ P+ YN L+ C + ++++ LF+E+ + A + ++N ++D
Sbjct: 741 FHEMPSKGVQ---PHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDG 796
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
Y K+ I+E + M + Q PD +T+ +ID + K ++ +FK +
Sbjct: 797 YCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVD 856
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREI 382
T+ S++ Y K + +F+KM A P +TY +I Y +C DN+ A ++
Sbjct: 857 TVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVI--YAHCKEDNLVEAFKL 914
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
DE+ G K + + ++ A C TEA L + +G+ P + L +++ +
Sbjct: 915 RDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHE 974
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
A + ++ + ++ G+VP+
Sbjct: 975 AGKMDEATRVFEGVKSLGLVPD 996
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 143/325 (44%), Gaps = 5/325 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ L+ + K G R A + EM G P+ +Y+ +I D +A+
Sbjct: 227 DVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVE-- 284
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
++ G + PN TY I+ +A+ +++ F+E+ ++ L PD + ++D
Sbjct: 285 ---LKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALID 341
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ + G I E+ + M S ++IT+N+LI K +K ++ K ++ KP
Sbjct: 342 GFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKP 401
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
TF +I Y + G+A + +M PS ++Y +I +C ++S A ++
Sbjct: 402 NSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLL 461
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
++++ G V + ++ AY G EA L + GV PD Y + +KA
Sbjct: 462 EKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKA 521
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFF 468
E L ++ G+ P+ F
Sbjct: 522 GKMEEASTYLLEIQGRGLKPDAVTF 546
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 135/306 (44%), Gaps = 15/306 (4%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ L EM P Y A+I H +D L+ A +KM KPN+V Y
Sbjct: 422 ALELLDEMEKRNLVPSAVSYGAMINGLCHCKD----LSLANKLLEKMT-FSGLKPNVVVY 476
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
+IL+ A A +++ L + S +APDI+ YN ++ K G ++E + L ++
Sbjct: 477 SILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQG 536
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
KPD +TF I Y K + + F ++ P P + +I + KA +
Sbjct: 537 RGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLME 596
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAM 401
A +F+++ A+ P T C ++G N V A ++F EL + G V T +++
Sbjct: 597 ALSIFRRLHALGVLPDVQT--CSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL 654
Query: 402 LEAYCMNGLPTEADLLFENSHNM---GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
+ +C G E + FE M G+ P+ Y L K+ + +KL M +
Sbjct: 655 ISGFCKQG---EVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE 711
Query: 459 NGIVPN 464
G+ P+
Sbjct: 712 KGLEPD 717
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 147/347 (42%), Gaps = 46/347 (13%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
K+ ++ L +FR + + D S I + K G+ + A+ +FSE++ G PD
Sbjct: 590 KAGNLMEALSIFRRLHA-LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 648
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQ 238
Y++LI+ K + KA +M KG+ PNI YN L+ ++ ++ +
Sbjct: 649 FTYSSLISGFC----KQGEVEKAFELHDEMCLKGI---APNIFIYNALVDGLCKSGDIQR 701
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
LF + E L PD TY+ ++D Y K+ + E S+ M S +P +N L+
Sbjct: 702 ARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVH 761
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
K +K +F+ ++ TL +FN++I Y K+ +A +FQ+M A + P
Sbjct: 762 GCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMP 820
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+TY +I + +C G EA+LLF
Sbjct: 821 DHVTYTTVI-----------------------------------DWHCKAGKMEEANLLF 845
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
+ + D+ TY L Y K V L ++M G+ P++
Sbjct: 846 KEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDE 892
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 130/319 (40%), Gaps = 9/319 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + K G+ A + M GC+P+ + LI + + +AL
Sbjct: 371 YNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRAL------- 423
Query: 208 QKMKGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+ + ME+ P+ V+Y ++ +++ N L +++ S L P++ Y+ ++ AY
Sbjct: 424 ELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAY 483
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
G I+E +L M + PDI +N +I K ++ + KP
Sbjct: 484 ASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDA 543
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
TF + I+ Y K +A F +M P+ Y +I + N+ A IF
Sbjct: 544 VTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRR 603
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
L LG V T +A + NG EA +F G+ PD TY L + K
Sbjct: 604 LHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGE 663
Query: 446 KELVQKLLKRMEQNGIVPN 464
E +L M GI PN
Sbjct: 664 VEKAFELHDEMCLKGIAPN 682
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 138/324 (42%), Gaps = 11/324 (3%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+YS LI +G+ A L M SG PD YNA+I+ KA + +A Y
Sbjct: 475 VYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISC----LSKAGKMEEASTY 530
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+++G KP+ VT+ + ++ + + F E+ + L P+ Y +++ +
Sbjct: 531 LLEIQG-RGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 589
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K G + E S+ R+ + PD+ T + I K + +VF L P +
Sbjct: 590 KAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 649
Query: 327 TFNSMIINYGKARLQGKAEYVFQ---KMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T++S+I + K QG+ E F+ +M P+ Y ++ ++ RAR++F
Sbjct: 650 TYSSLISGFCK---QGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLF 706
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
D + + G + T + M++ YC + EA LF + GV P S Y L K
Sbjct: 707 DGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKE 766
Query: 444 NMKELVQKLLKRMEQNGIVPNKRF 467
E L + M Q G F
Sbjct: 767 GDMEKAMNLFREMLQKGFATTLSF 790
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/355 (19%), Positives = 149/355 (41%), Gaps = 14/355 (3%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
L+ E + + + +E+ R M ++ + +T Y+ + A + + + A F EM+
Sbjct: 268 LVIEGMCQVGDIDEAVELKRSM-GEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQK 326
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKG-MERCKP--NIVTYNILLRAC 230
+G +PD + +ALI + D + L ++K M C N++TYN+L+
Sbjct: 327 TGLKPDYNACSALIDGFMREGDIDEVL--------RIKDVMVSCGIPINLITYNVLIHGL 378
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
+ +++ + K + P+ T+ +++ Y + + +L M+ P
Sbjct: 379 CKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSA 438
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
+++ +I+ + ++ + + S KP + ++ +I+ Y +A +
Sbjct: 439 VSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDG 498
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M+ P Y II+ + A E+ G T A + Y G
Sbjct: 499 MSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGK 558
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA-NMKELVQKLLKRMEQNGIVPN 464
TEA F+ + G+ P++ Y +L + KA N+ E + + +R+ G++P+
Sbjct: 559 MTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALS-IFRRLHALGVLPD 612
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 128/330 (38%), Gaps = 77/330 (23%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ + +FR M ++ + A T ++ LI K + + A LF EM PD Y +
Sbjct: 771 KAMNLFREMLQKGF--ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTV 828
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
I H CK A +++ N LFKE+
Sbjct: 829 IDWH-------------------------CK---------------AGKMEEANLLFKEM 848
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
E L D TY +M Y K G E+ ++ +M + KPD +T+ L+I +
Sbjct: 849 QERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYA------- 901
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
H KE + F K R + + + K T ++ +
Sbjct: 902 -----------HCKEDNLVEAF--------KLRDEVVGKGMLTKGT---------IHDLL 933
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
IT ++++ A ++ DE+ +LG ++ N ++ ++ G EA +FE ++G+
Sbjct: 934 ITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGL 993
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
PD++T L E + L+K++
Sbjct: 994 VPDTTTLIDLVNGNLNDTDSEDARNLIKQL 1023
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 72/174 (41%)
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
+ F++LIDSY + D+ VF + +L NS++ + K + V+
Sbjct: 159 VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNG 218
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M K TY ++ ++ A+ + E+ + G + + ++E C G
Sbjct: 219 MLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGD 278
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA L + G+ P++ TY ++ +A + + M++ G+ P+
Sbjct: 279 IDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPD 332
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 163/394 (41%), Gaps = 35/394 (8%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+F G+ D L L+ K AD +Y+ I GK G+ ++ F EM++
Sbjct: 239 VFAREGRVDAALSLLD----EMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSH 294
Query: 175 GCRPDPSVYNALITAHLHTR--DKAKALAKAL----------------------GYFQKM 210
G PD Y ++I D+A L + L G F +
Sbjct: 295 GLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEA 354
Query: 211 KGM-ERCK-----PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
G+ ER K P+++ YN +L + R V++ +F+E+ + P++ TYN ++D
Sbjct: 355 YGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDM 413
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ G + + M+ P+++T N++ID K Q ++ +F+ + P
Sbjct: 414 LCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPN 473
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
TF+S+I GK A +++KM + P I Y +I + C +I+
Sbjct: 474 AVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYK 533
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E+ G ++ +N ++ G + LF + G PD+ +Y +L KA
Sbjct: 534 EMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAG 593
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ +L M++ G V + + ++ F S
Sbjct: 594 LANETYELFYAMKEQGCVLDTHAYNAVIDGFCKS 627
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 145/337 (43%), Gaps = 13/337 (3%)
Query: 145 TGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKAL 204
+ I +L+A K + R A + MR RP S Y LI A R+ L
Sbjct: 160 SNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLI--- 216
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
F +M+ + + N+ + L+R A+ VD +L E+ + L DI YN +D
Sbjct: 217 -LFHQMQELGY-EVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDC 274
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+GK G + MKS+ PD +T+ +I K D+ ++F+ L +++ P
Sbjct: 275 FGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPC 334
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+N+MI+ YG A +A + ++ A PS I Y CI+T G V A IF+
Sbjct: 335 AYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFE 394
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E+ + V T N +++ C G A + ++ G+ P+ T ++ KA
Sbjct: 395 EMKRDAVP-NVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQ 453
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
E + + M+ PN TFSS + G
Sbjct: 454 KLEEACSIFEGMDDKVCTPNAV-------TFSSLIDG 483
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 152/341 (44%), Gaps = 17/341 (4%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L +F MQ + Y + +++ LI V ++G+ A+ L EM+++ D +YN I
Sbjct: 215 LILFHQMQ-ELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCID 273
Query: 189 AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE 248
KA + + +F +MK P+ VTY ++ +A +D+ LF++L +
Sbjct: 274 CF----GKAGKVDMSWKFFHEMKS-HGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQ 328
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
+ P Y YN ++ YG G E +L R K+ P +I +N ++ GK++ ++
Sbjct: 329 NRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEE 388
Query: 309 MEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
++F+ M P +PT+N +I + A + M P+ +T +I
Sbjct: 389 ALRIFEE-MKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMID 447
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP-----TEADLLFENSHN 423
+ A IF+ G D KV T NA+ + ++GL +A L+E +
Sbjct: 448 RLCKAQKLEEACSIFE-----GMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLD 502
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G P + Y L +++ K KE K+ K M G P+
Sbjct: 503 CGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPD 543
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 142/318 (44%), Gaps = 8/318 (2%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
+I D YS LI + K G LF M+ GC D YNA+I K+ +
Sbjct: 575 FIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFC----KSGKV 630
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
KA ++MK ++ P +VTY ++ A+ +D+ LF+E + + ++ Y+
Sbjct: 631 NKAYQLLEEMK-VKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSS 689
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++D +GK G I E ++ + P++ T+N L+D+ K + ++ F+S+ K
Sbjct: 690 LIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLK 749
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P T++ +I + R KA +Q+M + P+ ITY +I+ N+ A
Sbjct: 750 CPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEAS 809
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+F G ++ NAM+E +A LFE + G + T +L A
Sbjct: 810 GLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDAL 869
Query: 441 TKANMKE---LVQKLLKR 455
KA E +V +LK
Sbjct: 870 HKAECLEQAAIVGAVLKE 887
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 144/332 (43%), Gaps = 5/332 (1%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ LI K G+ ++ EM ++GC PD + LI ++ KA K
Sbjct: 511 VYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLT----LINTYMDCVFKAGETEKGRAL 566
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F+++ P+ +Y+IL+ +A ++ LF + E D + YN V+D +
Sbjct: 567 FREINA-HGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFC 625
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K+G + + +L MK P ++T+ +ID K D+ +F+ + K +
Sbjct: 626 KSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVV 685
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
++S+I +GK +A + +++ TP+ T+ C++ + ++ A F +
Sbjct: 686 VYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSM 745
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
L T + ++ C +A + ++ +G+ P++ TY + KA
Sbjct: 746 KDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNI 805
Query: 447 ELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
L R + NG +P+ + +E SS+
Sbjct: 806 LEASGLFSRFKANGGIPDSASYNAMIEGLSSA 837
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 122/288 (42%), Gaps = 5/288 (1%)
Query: 157 KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERC 216
K G+T LF E+ G PD Y+ LI H KA + F MK + C
Sbjct: 556 KAGETEKGRALFREINAHGFIPDARSYSILI----HGLVKAGLANETYELFYAMK-EQGC 610
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+ YN ++ ++ V++ L +E+ P + TY V+D K + E
Sbjct: 611 VLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYM 670
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+ KSN K +++ ++ LID +GK D+ + + LM P + T+N ++
Sbjct: 671 LFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALV 730
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
KA +A FQ M +K P+ ITY +I ++A + E+ KLG
Sbjct: 731 KAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTI 790
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
T M+ G EA LF G PDS++Y + + + AN
Sbjct: 791 TYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSAN 838
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 146/349 (41%), Gaps = 15/349 (4%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L K+++ + +E+F +++ R + Y+ +I G G+ A L + G P
Sbjct: 310 LCKANRLDEAVELFEQLEQNR-KVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP 368
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
YN ++T K + + +AL F++MK PN+ TYNIL+ + ++
Sbjct: 369 SVIAYNCILTC----LGKKRRVEEALRIFEEMK--RDAVPNVPTYNILIDMLCREGKLNA 422
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+ ++ + L P++ T N ++D K ++E S+ M C P+ +TF+ LID
Sbjct: 423 ALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLID 482
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
GK D +++ ++ P + S+I ++ K + ++++M +P
Sbjct: 483 GLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSP 542
Query: 359 SFITYECIITMYGYC----DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+I Y C + R +F E++ G + + ++ GL E
Sbjct: 543 DLT----LINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANET 598
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
LF G D+ Y + + K+ +LL+ M+ G P
Sbjct: 599 YELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPP 647
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 148/346 (42%), Gaps = 7/346 (2%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
LGK + + L +F M++ + + Y+ LI ++ ++G+ A+ + +M +G P
Sbjct: 380 LGKKRRVEEALRIFEEMKRDA--VPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFP 437
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
+ N +I KA+ L +A F+ M + C PN VT++ L+ + VD
Sbjct: 438 NVLTVNIMIDRLC----KAQKLEEACSIFEGMDD-KVCTPNAVTFSSLIDGLGKCGRVDD 492
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+L++++ + P Y ++ ++ K G ++ + M C PD+ N +D
Sbjct: 493 AYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMD 552
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
K +K +F+ + P +++ +I KA L + +F M
Sbjct: 553 CVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVL 612
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
Y +I + V++A ++ +E+ G V T ++++ EA +LF
Sbjct: 613 DTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLF 672
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
E + + G+ + Y L + K + +++ + Q G+ PN
Sbjct: 673 EEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPN 718
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 87/209 (41%), Gaps = 22/209 (10%)
Query: 100 LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG 159
++ + KV R + +L+ EEL Q+ + ++ L+ + K
Sbjct: 691 IDGFGKVGRIDEAYLIMEEL-----------------MQKGLTPNVYTWNCLLDALVKAE 733
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
+ A+ F M++ C P+ Y+ LI R KA ++Q+M+ + KPN
Sbjct: 734 EINEALICFQSMKDLKCPPNQITYSILINGLCRVRK----FNKAFVFWQEMQKL-GLKPN 788
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLS 279
+TY ++ A+A N+ + + LF + PD +YN +++ + ++
Sbjct: 789 TITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFE 848
Query: 280 RMKSNQCKPDIITFNLLIDSYGKRQAFDK 308
+ C T +L+D+ K + ++
Sbjct: 849 ETRLKGCNIHTKTCVVLLDALHKAECLEQ 877
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 93/223 (41%), Gaps = 16/223 (7%)
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI-ITFNLL---IDSYGKR 303
E + P+ YN ++ +N +E +L M + P I+ L+ + S R
Sbjct: 120 EKVHCPE--AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLR 177
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
+AFD + +++ K +P + +I + R +F +M + Y + +
Sbjct: 178 EAFD----IIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLF 233
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+I ++ V A + DE+ D + N ++ + G + D+ ++ H
Sbjct: 234 TTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCF---GKAGKVDMSWKFFHE 290
Query: 424 M---GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
M G+ PD TY + KAN + +L +++EQN VP
Sbjct: 291 MKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVP 333
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 148/331 (44%), Gaps = 12/331 (3%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
L AV+ K ++A +F EM SG P+ YN LI A L L +F +M
Sbjct: 174 LDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFC----TAGNLEMGLFFFGEM 229
Query: 211 KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
+ C PN+VTYN ++ A + R + + L + + L P++ +YN V++ + G
Sbjct: 230 E-RNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQ 288
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
+KE +L M + PD +TFN LI+ Y F + + ++ + P + T+ +
Sbjct: 289 MKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTT 348
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
+I + KA +A +M P+ TY +I + + +A +I E+ + G
Sbjct: 349 LINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENG 408
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
+ T NA++ +C+ G +A L + G PD +Y + + + E
Sbjct: 409 FTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAF 468
Query: 451 KLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
+L M GI P+ + T+SS + G
Sbjct: 469 QLKVEMVAKGISPD-------VATYSSLIQG 492
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 148/349 (42%), Gaps = 34/349 (9%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL------- 200
Y+ LI G + ++ F EM +GC P+ YN +I A+ R +A
Sbjct: 206 YNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMA 265
Query: 201 -----AKALGYFQKMKGM------------------ERCKPNIVTYNILLRACAQARNVD 237
+ Y + G+ R P+ VT+N L+ N
Sbjct: 266 LKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFH 325
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
Q L E+ ++ L+P++ TY ++++ K G + L +M+ P+ T+ LI
Sbjct: 326 QALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLI 385
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
D + ++ + Q+ K ++ + PT+ T+N++I + A + Q+M +
Sbjct: 386 DGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFI 445
Query: 358 PSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEAD 415
P ++Y II+ G+C N + +A ++ E+ G V+T +++++ C E
Sbjct: 446 PDVVSYSTIIS--GFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVC 503
Query: 416 LLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
LF+ ++G+ PD TY L AY + +L M Q G P+
Sbjct: 504 DLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPD 552
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 158/385 (41%), Gaps = 56/385 (14%)
Query: 130 EVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
E+ M K+R Y+ D ++ LI G A+ L +EM +G P+ Y LI +
Sbjct: 294 EILEEMSKRR-YVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINS 352
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
KA L +A+ + +M+ PN TY L+ +Q + Q + KE+ E+
Sbjct: 353 MC----KAGNLNRAMEFLDQMRD-RGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVEN 407
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
P I TYN +++ + G +++ +L M PD+++++ +I + + Q +K
Sbjct: 408 GFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKA 467
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
Q+ ++ P + T++S+I K R G+ +FQ+M ++ P +TY +I
Sbjct: 468 FQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINA 527
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLN------------------------------ 399
Y ++ +A + DE+ + G + T N
Sbjct: 528 YCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPN 587
Query: 400 --------------------AMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
A+++ +CM GL EAD + E+ G + Y ++
Sbjct: 588 EITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHG 647
Query: 440 YTKANMKELVQKLLKRMEQNGIVPN 464
++K E L K M +G P+
Sbjct: 648 HSKVGNIEKAYNLYKEMLHSGFAPH 672
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 135/301 (44%), Gaps = 4/301 (1%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ + + ++ G P YNA++ A + T+ K A G F++M PN+ TY
Sbjct: 151 ALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKI---AEGIFKEMVE-SGVSPNVYTY 206
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
NIL+R A N++ F E+ + P++ TYN ++DAY K I E +L M
Sbjct: 207 NILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMAL 266
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
P++I++N++I+ + + ++ + + + P TFN++I Y +
Sbjct: 267 KGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQ 326
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A + +M +P+ +TY +I N++RA E D++ G T +++
Sbjct: 327 ALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLID 386
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
+ G +A + + G TP TY L + E LL+ M + G +P
Sbjct: 387 GFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIP 446
Query: 464 N 464
+
Sbjct: 447 D 447
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 119/265 (44%), Gaps = 5/265 (1%)
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM-IKE 273
+CK + +++++++CA+ +++ ++ P + +YN ++DA + +K
Sbjct: 127 QCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKI 186
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
E + M + P++ T+N+LI + + F + + P + T+N++I
Sbjct: 187 AEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIID 246
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGK 391
Y K R G+A + + M P+ I+Y +I G C + EI +E+SK
Sbjct: 247 AYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVIN--GLCREGQMKETSEILEEMSKRRY 304
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
T N ++ YC G +A +L G++P+ TY L + KA +
Sbjct: 305 VPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAME 364
Query: 452 LLKRMEQNGIVPNKRFFLEALETFS 476
L +M G+ PN R + ++ FS
Sbjct: 365 FLDQMRDRGLHPNGRTYTTLIDGFS 389
>gi|410110133|gb|AFV61146.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rhodocnemis]
Length = 345
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 132/273 (48%), Gaps = 6/273 (2%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ +FS ++ G PD YNA+I KAK +A +MK PN +Y
Sbjct: 6 AISIFSRLKRLGFMPDLVAYNAMINVF----GKAKLFREARSLISEMK-TAGVMPNTTSY 60
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
+ LL + + + ++F E+ E D+ T N ++D YG+ GM KE + + M+
Sbjct: 61 STLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 120
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+P+++++N L+ YG + F + +F+ + + + T+NSMI+ YGK K
Sbjct: 121 MGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEK 180
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A + Q+M + P+ ITY II+++G + RA +F +L G ++ M+
Sbjct: 181 ANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIV 240
Query: 404 AYCMNGLPTEAD-LLFENSHNMGVTPDSSTYKL 435
AY GL A LL E + D++ + L
Sbjct: 241 AYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL 273
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 131/263 (49%), Gaps = 1/263 (0%)
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+KA+ F ++K + P++V YN ++ +A+ + +L E+ + + P+ +Y+
Sbjct: 4 SKAISIFSRLKRLG-FMPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYST 62
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ Y +N E SV S M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 63 LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 122
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P + ++N+++ YG A L G+A ++F+ M + +TY +I +YG +A
Sbjct: 123 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKAN 182
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
+ E+ G + T + ++ + G A +LF+ + GV D ++ + AY
Sbjct: 183 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY 242
Query: 441 TKANMKELVQKLLKRMEQNGIVP 463
+A + ++LL +++ +P
Sbjct: 243 ERAGLVAHAKRLLHELKRPDNIP 265
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 150/331 (45%), Gaps = 15/331 (4%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ ++ D Y+ +I V GK R A L SEM+ +G P+ + Y+ L+T ++
Sbjct: 14 KRLGFMPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVEN--- 70
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
K +AL F +M+ + +C ++ T NI++ Q + + LF + + + P++
Sbjct: 71 -KKFLEALSVFSEMREI-KCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVV 128
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+YN ++ YG + E + M+ + +++T+N +I YGK +K + + +
Sbjct: 129 SYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQEM 188
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P T++++I +GK +A +FQK+ + I ++ +I Y V
Sbjct: 189 QSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLV 248
Query: 377 SRAREIFDELSK---LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ A+ + EL + + +D + L G EA +F + + G D + +
Sbjct: 249 AHAKRLLHELKRPDNIPRDTAIHILAG-------AGRIEEATYVFRQAIDAGEVKDITVF 301
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ + +K V ++ +M G P+
Sbjct: 302 ERMIHLLSKYKKYSNVVEVFDKMRGLGYFPD 332
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 74/159 (46%)
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+ K +F L P L +N+MI +GKA+L +A + +M P+ +Y
Sbjct: 3 YSKAISIFSRLKRLGFMPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYST 62
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
++TMY A +F E+ ++ + ++T N M++ Y G+ EAD LF MG
Sbjct: 63 LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 122
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ P+ +Y L + Y A + L + M++ I N
Sbjct: 123 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 161
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 119/282 (42%), Gaps = 37/282 (13%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
++ K+L+ L VF M++ + + D + +I V G+ G + A LF MR G P+
Sbjct: 69 ENKKFLEALSVFSEMREIKCLL-DLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 127
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
YN L L A+ +A+ F+ M+ + + N+VTYN ++ + ++ N
Sbjct: 128 VSYNTL----LRVYGDAELFGEAIHLFRLMQ-RKNIEQNVVTYNSMIMIYGKTLEHEKAN 182
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
L +E+ + P+ TY+ ++ +GK G + + +++S+ + D I F +I +Y
Sbjct: 183 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY 242
Query: 301 --------GKRQAFD--------------------KMEQ---VFKSLMHSKEKPTLPTFN 329
KR + ++E+ VF+ + + E + F
Sbjct: 243 ERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFE 302
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
MI K + VF KM + Y P ++ YG
Sbjct: 303 RMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYG 344
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 85/189 (44%)
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY 335
S+ SR+K PD++ +N +I+ +GK + F + + + + P ++++++ Y
Sbjct: 8 SIFSRLKRLGFMPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMY 67
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
+ + +A VF +M +K T +I +YG A ++F + K+G + V
Sbjct: 68 VENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 127
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+ N +L Y L EA LF + + TY + Y K E L++
Sbjct: 128 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQE 187
Query: 456 MEQNGIVPN 464
M+ GI PN
Sbjct: 188 MQSRGIEPN 196
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 73/155 (47%), Gaps = 9/155 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS +I++ GK G+ A LF ++R+SG D ++ +I A+ ++A +A A
Sbjct: 200 YSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY----ERAGLVAHAKRLL 255
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++K +P+ + + + A A +++ +F++ ++ DI + ++ K
Sbjct: 256 HELK-----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMIHLLSK 310
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK 302
+ V +M+ PD +++++YGK
Sbjct: 311 YKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGK 345
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 176/385 (45%), Gaps = 27/385 (7%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
Q L +++ M + + D + LI + K G+ + A LF M P+ +VYN+L
Sbjct: 270 QALRLYQDMLGEGL-VPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSL 328
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKE 245
I A+ D ++A+A F +++ E P++ TY+IL+R C+ +R + N K
Sbjct: 329 IDAYCKVGDVSEAMA----LFLELERFE-VSPDVFTYSILIRGLCSVSRTEEAGNIFEKM 383
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
E ILA + TYN ++D K G + + + S+M N +P++ITF+ LID Y K +
Sbjct: 384 TKEGILANSV-TYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRN 442
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
++ ++ P + T+ +MI + K +A ++ M TP+ T C
Sbjct: 443 LQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISC 502
Query: 366 IITMYGYCDN--VSRAREIFDELSKL--------GKDMKVSTLN-----AMLEAYCMNGL 410
++ G C + +S A E+F E + K S N A++ C +G
Sbjct: 503 LLD--GLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQ 560
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
++A LF + G+ PD Y ++ + + +K ++ L M + G++PN +
Sbjct: 561 FSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQ--VKYILMMLHADMLKFGVIPNSAVHVI 618
Query: 471 ALETFSSSLAGSQSGSAKTDLTRSL 495
E + S + + DL +L
Sbjct: 619 LCECYQESGFLKSAQNCSKDLEENL 643
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 135/295 (45%), Gaps = 11/295 (3%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
L+ V+ K G+ L ++ EM ++G P + LI D L +A F +M
Sbjct: 153 LLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGD----LLRAQEMFDEM 208
Query: 211 KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
+ ++ P ++ Y IL+R +++ ++ + + E + P++YTYN +MD Y K
Sbjct: 209 R-VKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLAN 267
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
K+ + M PD++TF +LID K +F +++ P + +NS
Sbjct: 268 AKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNS 327
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE---IFDELS 387
+I Y K +A +F ++ + +P TY +I G C +VSR E IF++++
Sbjct: 328 LIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIR--GLC-SVSRTEEAGNIFEKMT 384
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
K G T N++++ C G +A + GV P+ T+ L Y K
Sbjct: 385 KEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCK 439
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 143/330 (43%), Gaps = 10/330 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + + L+ E+F M + + + +Y+ LI + + A + MR
Sbjct: 188 LIDGCCRQGDLLRAQEMFDEM-RVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREV 246
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P+ YN L+ + K +AL +Q M G E P++VT+ IL+ +
Sbjct: 247 GVYPNVYTYNTLMDGYC----KLANAKQALRLYQDMLG-EGLVPDVVTFGILIDGLCKFG 301
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ LF + + + P+I YN ++DAY K G + E ++ ++ + PD+ T++
Sbjct: 302 EMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYS 361
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+LI ++ +F+ + T+NS+I K KA + +MT
Sbjct: 362 ILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTEN 421
Query: 355 KYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
P+ IT+ +I GYC N+ A I+ E+ V T AM++ +C G
Sbjct: 422 GVEPNVITFSTLID--GYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMK 479
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
EA L+ + + G+TP+ T L K
Sbjct: 480 EALKLYSDMLDNGITPNCYTISCLLDGLCK 509
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 145/320 (45%), Gaps = 11/320 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+ LI ++G A +F EMR G P VY LI L + +K + A+++
Sbjct: 185 FGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRG-LCSDNKIEE-AESMHRA 242
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ G+ PN+ TYN L+ + N Q L++++ L PD+ T+ ++D K
Sbjct: 243 MREVGV---YPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCK 299
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G +K ++ M P+I +N LID+Y K + +F L + P + T
Sbjct: 300 FGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFT 359
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDE 385
++ +I +A +F+KMT + +TY +I G C + +A EI +
Sbjct: 360 YSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLID--GCCKEGKMDKALEICSQ 417
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK-AN 444
+++ G + V T + +++ YC A ++ ++PD TY + + K +
Sbjct: 418 MTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGS 477
Query: 445 MKELVQKLLKRMEQNGIVPN 464
MKE + KL M NGI PN
Sbjct: 478 MKEAL-KLYSDMLDNGITPN 496
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 132/300 (44%), Gaps = 13/300 (4%)
Query: 168 FSEM-RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
FSE+ R + P+VY LI K + + +AL + K+ I N+L
Sbjct: 102 FSELSRLKSSKFTPNVYGELIIVLC----KMELVEEALSMYHKVGA----ALTIQACNVL 153
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
L + + + +++E+ + L+P + T+ ++D + G + + + M+
Sbjct: 154 LYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGI 213
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
P +I + +LI ++ E + +++ P + T+N+++ Y K +A
Sbjct: 214 VPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALR 273
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEA 404
++Q M P +T+ +I G C + AR +F + K ++ N++++A
Sbjct: 274 LYQDMLGEGLVPDVVTFGILID--GLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDA 331
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
YC G +EA LF V+PD TY +L + + E + ++M + GI+ N
Sbjct: 332 YCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILAN 391
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 144/344 (41%), Gaps = 27/344 (7%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAM------WLFSEMRNSGCR-----------PDPSVYNA 185
AD +S +I ++ KKG A S M + C+ P ++N
Sbjct: 247 ADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNT 306
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMER--CKPNIVTYNILLRACAQARNVDQVNALF 243
LI H K+K L + FQ+MK M+ C PN+ TYNI++ +A+ +D+ L
Sbjct: 307 LI----HAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELV 362
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR 303
E+ L+PD+ TY+ ++D K G + +L M PD T ++++ K
Sbjct: 363 NEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKA 422
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
D +++ P L T+N+++ KA +A KM A K TP +Y
Sbjct: 423 GKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSY 482
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
IIT + A IF E+ K G +++L+ NGL DL E
Sbjct: 483 TIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLE---DLALELLKT 539
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
PD +K++ KA E ++++RM G P F
Sbjct: 540 SLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGF-PADAF 582
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 170/418 (40%), Gaps = 64/418 (15%)
Query: 103 YVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTR 162
Y V + +CFL + L K++ E F+ MQ+ R Y D YS ++ + K G+
Sbjct: 34 YQHSVFTYNCFL--DALAKANAGQLAYEKFQQMQR-RGYPPDDFTYSIVLRGLCKAGELD 90
Query: 163 LAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVT 222
A L ++R SG + + Y+ +I KA + AL F+ M C P++VT
Sbjct: 91 KAKELLGQLRESGVKLNVITYSVVIDGCC----KASRVDDALEIFKTMSSGGGCVPDVVT 146
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
+N LL+ + + LF+ + ++ P++ +Y+ ++D K G + E + M
Sbjct: 147 FNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMV 206
Query: 283 SNQCKPDIITF------------------------------------------------- 293
C PD++ +
Sbjct: 207 EKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAE 266
Query: 294 ---NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
N +I+ + D+ + F+ ++ P+ FN++I K++ +FQ+
Sbjct: 267 EAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQR 326
Query: 351 MTAMK---YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
M +MK P+ TY ++ + A+E+ +E++ G V T +A+++ C
Sbjct: 327 MKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCK 386
Query: 408 NG-LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G L DLL E S GV PDS T + A +KA + L+ M+ G P+
Sbjct: 387 LGKLDRACDLLEEMSKE-GVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPD 443
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 144/351 (41%), Gaps = 29/351 (8%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS L+ + K G+ A L+ EM C PD Y + +T KA +A+A
Sbjct: 182 YSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLC----KANRVAEACDCC 237
Query: 208 QKM--KGMERCKPNIVTYNILLRACA------QARN-----------VDQVNALFKELHE 248
+KM KG K + V ++ ++ +A+N +D+ F+E+
Sbjct: 238 RKMVTKGS---KADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMIS 294
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ---CKPDIITFNLLIDSYGKRQA 305
P +N ++ A K+ + + + RMKS + C P++ T+N+++D+ K +
Sbjct: 295 RNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQ 354
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
D+ +++ + + P + T+++++ K +A + ++M+ P T
Sbjct: 355 LDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDAS 414
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
I+ V A + + G + T N +L+ C G EA
Sbjct: 415 ILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAK 474
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
TPD +Y ++ A ++ + + M + G++P+ + L+ +
Sbjct: 475 CTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLA 525
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 22/252 (8%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD----PSVYNALITAHLHTRDKAKA 199
D YS L+ + K G+ A L EM G PD S+ NAL KA
Sbjct: 373 DVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNAL--------SKAGK 424
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
+ AL + + MK P++VTYN LL +A +D+ ++ + PD+++Y
Sbjct: 425 VDYALSHLETMKARGS-TPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYT 483
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
++ A ++G ++ M PD + ++ L+D + D ++ K+ S
Sbjct: 484 IIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKT---S 540
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAE---YVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
KP ++ KA GKAE V ++M + TY +++ V
Sbjct: 541 LCKPDFVMHKMVLDGLCKA---GKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKV 597
Query: 377 SRAREIFDELSK 388
+AR++ D+ S+
Sbjct: 598 DKARQLVDDASE 609
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 80/195 (41%), Gaps = 16/195 (8%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
GK D L LE K R D Y+ L+ + K G+ A+ ++M + C PD
Sbjct: 423 GKVDYALSHLETM----KARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPD 478
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVD 237
Y +ITA + A A A FQ+M +G+ P+ V Y+ LL A+ D
Sbjct: 479 VFSYTIIITALCRSGQAAGAHA----IFQEMVKRGV---LPDTVLYHSLLDGLARNGLED 531
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
L K S+ PD + V+D K G ++ V+ RM D T+ ++
Sbjct: 532 LALELLKT---SLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVV 588
Query: 298 DSYGKRQAFDKMEQV 312
K DK Q+
Sbjct: 589 SGLRKLGKVDKARQL 603
>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g42310, mitochondrial; Flags: Precursor
gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 709
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 157/333 (47%), Gaps = 13/333 (3%)
Query: 137 KQRWYIADTGIYSKLIAVMGK--KGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR 194
+Q Y +D YS +I + + K + + + L+ E+ D + N +I +
Sbjct: 224 RQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSG 283
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
D +KAL + LG Q G+ +V+ ++ A A + + ALF+EL +S + P
Sbjct: 284 DPSKAL-QLLGMAQA-TGLSAKTATLVS---IISALADSGRTLEAEALFEELRQSGIKPR 338
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
YN ++ Y K G +K+ ES++S M+ PD T++LLID+Y ++ V K
Sbjct: 339 TRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLK 398
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECIITMYG 371
+ +P F+ ++ + R +G+ + FQ + MK P Y +I +G
Sbjct: 399 EMEAGDVQPNSFVFSRLLAGF---RDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFG 455
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ + A FD + G + T N +++ +C +G A+ +FE G P ++
Sbjct: 456 KFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCAT 515
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
TY ++ +Y + +++LL +M+ GI+PN
Sbjct: 516 TYNIMINSYGDQERWDDMKRLLGKMKSQGILPN 548
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 158/379 (41%), Gaps = 34/379 (8%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
F + G K LQ L M + A T +I+ + G+T A LF E+R SG
Sbjct: 279 FAKSGDPSKALQLLG----MAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSG 334
Query: 176 CRPDPSVYNALITAHLHT---RDKAKALAKA---------------------LGYFQK-- 209
+P YNAL+ ++ T +D +++ G ++
Sbjct: 335 IKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESAR 394
Query: 210 --MKGME--RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+K ME +PN ++ LL + + KE+ + PD YN V+D +
Sbjct: 395 IVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTF 454
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
GK + + RM S +PD +T+N LID + K E++F+++ P
Sbjct: 455 GKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCA 514
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+N MI +YG + + KM + P+ +T+ ++ +YG + A E +E
Sbjct: 515 TTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEE 574
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ +G + NA++ AY GL +A F + G+ P L A+ +
Sbjct: 575 MKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRR 634
Query: 446 KELVQKLLKRMEQNGIVPN 464
+L+ M++NG+ P+
Sbjct: 635 DAEAFAVLQYMKENGVKPD 653
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 162/377 (42%), Gaps = 45/377 (11%)
Query: 92 DKEPLVRTLNKYVKVVRSEHCF-LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSK 150
D E +V + K V EH + LL + + +W V + M+ ++ ++S+
Sbjct: 357 DAESMVSEMEKR-GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD-VQPNSFVFSR 414
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
L+A +G+ + + EM++ G +PD YN +I T K L A+ F +M
Sbjct: 415 LLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVI----DTFGKFNCLDHAMTTFDRM 470
Query: 211 KGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG 269
E +P+ VT+N L+ C R++ +F+ + P TYN ++++YG
Sbjct: 471 LS-EGIEPDRVTWNTLIDCHCKHGRHI-VAEEMFEAMERRGCLPCATTYNIMINSYGDQE 528
Query: 270 MIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFN 329
+M+ +L +MKS P+++T L+D YGK F+ + + + KP+ +N
Sbjct: 529 RWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYN 588
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
++I Y + L +A F+ MT+ PS +
Sbjct: 589 ALINAYAQRGLSEQAVNAFRVMTSDGLKPSLL---------------------------- 620
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
LN+++ A+ + EA + + GV PD TY L KA + + + V
Sbjct: 621 -------ALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKV 673
Query: 450 QKLLKRMEQNGIVPNKR 466
+ + M +G P+++
Sbjct: 674 PVVYEEMIMSGCKPDRK 690
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 114/255 (44%), Gaps = 7/255 (2%)
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y+IL+ A ++ + + F + L P TYN ++ A +N I++ +++++M+
Sbjct: 170 YSILIHALGRSEKLYEA---FLLSQKQTLTP--LTYNALIGACARNNDIEKALNLIAKMR 224
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDK--MEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
+ + D + ++L+I S + D + +++K + K + + N +I+ + K+
Sbjct: 225 QDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGD 284
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
KA + A + T II+ A +F+EL + G + NA
Sbjct: 285 PSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNA 344
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+L+ Y G +A+ + GV+PD TY LL AY A E + +LK ME
Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 404
Query: 461 IVPNKRFFLEALETF 475
+ PN F L F
Sbjct: 405 VQPNSFVFSRLLAGF 419
>gi|449525162|ref|XP_004169587.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g73710-like [Cucumis sativus]
Length = 1026
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 163/369 (44%), Gaps = 44/369 (11%)
Query: 145 TGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKAL 204
T Y+ LI + GK G+ + A +F EM +G D +N +I +T LA+A
Sbjct: 321 TSTYNTLIDLYGKAGRLKDAANVFGEMLTTGISMDTITFNTMI----YTCGSHGHLAEAE 376
Query: 205 GYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
KM+ ER P+ TYNI L A N+D ++ + E L PD+ T+ ++
Sbjct: 377 TLLLKME--ERGLSPDTKTYNIFLSLYANDGNIDGALKCYRRIREVGLFPDVVTHRALLH 434
Query: 264 AYGKNGMIKEMESVLSRMKSNQCK------PDIITFNL---------------------- 295
+ M++++E+V++ M+ + P +I +
Sbjct: 435 VLSERNMVEDVENVIAEMEKSHILLDEHSLPRVIKMYINEGLLDRAKILLEKYRLDTELS 494
Query: 296 ------LIDSYGKRQAFDKMEQVF--KSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
+ID+Y ++ + + E +F K + K K + +N MI YGKA L KA +
Sbjct: 495 PRISAAIIDAYAEKGLWFEAESIFLWKRDLAGK-KXDVMEYNVMIKAYGKAELYEKAFLL 553
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F+ M P TY +I M+ D V AR + E+ ++G T +A++ +Y
Sbjct: 554 FKSMKNRGTWPDECTYNSLIQMFSGGDLVDEARRLLTEMQRMGFKPTCQTFSAVIASYAR 613
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
GL ++A +++ + V P+ Y +L + + E K + ME++GI N+
Sbjct: 614 LGLMSDAVEVYDMMVHADVEPNEILYGVLVNGFAEIGQAEEALKYFRLMEKSGIAENQIV 673
Query: 468 FLEALETFS 476
++ FS
Sbjct: 674 LTSLIKAFS 682
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 117/283 (41%), Gaps = 20/283 (7%)
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+ + FQ K + PN++ YNI+LR QA+ D++ + E+ E+ + P TY +
Sbjct: 143 RVIQVFQWFKSQKDYVPNVIHYNIVLRTLGQAQKWDELRLCWNEMAENGVVPTNNTYGML 202
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+D YGK G++KE + M PD +T N ++ FD ++ +K
Sbjct: 203 IDVYGKVGLVKEALLWIKHMTVRGIFPDEVTMNTVVRVLKDAGEFDSADKFYKDWCRGLV 262
Query: 322 KPTLPTFNSMIINYG----------KARLQGKAEYVFQKMTAMKYTPSFI---------- 361
+ NS + ++G K + + ++ K +P
Sbjct: 263 ELNDFDLNSRVEDFGVNSAVEPITPKHFCXTELFRIGTRIPNRKVSPEVDNCVRKPRLTS 322
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
TY +I +YG + A +F E+ G M T N M+ +G EA+ L
Sbjct: 323 TYNTLIDLYGKAGRLKDAANVFGEMLTTGISMDTITFNTMIYTCGSHGHLAEAETLLLKM 382
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G++PD+ TY + Y + K +R+ + G+ P+
Sbjct: 383 EERGLSPDTKTYNIFLSLYANDGNIDGALKCYRRIREVGLFPD 425
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/367 (20%), Positives = 152/367 (41%), Gaps = 60/367 (16%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L + +W + ++VF+W + Q+ Y+ + Y+ ++ +G+ + ++EM +G P
Sbjct: 135 LKEQSRWERVIQVFQWFKSQKDYVPNVIHYNIVLRTLGQAQKWDELRLCWNEMAENGVVP 194
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
+ Y LI + K + +AL + + M + P+ VT N ++R A D
Sbjct: 195 TNNTYGMLIDVY----GKVGLVKEALLWIKHMT-VRGIFPDEVTMNTVVRVLKDAGEFDS 249
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIK----------EMESVLSRMKSNQCKP 288
+ +K+ ++ + + N ++ +G N ++ E+ + +R+ + + P
Sbjct: 250 ADKFYKDWCRGLVELNDFDLNSRVEDFGVNSAVEPITPKHFCXTELFRIGTRIPNRKVSP 309
Query: 289 DII----------TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
++ T+N LID YGK VF ++ + TFN+MI G
Sbjct: 310 EVDNCVRKPRLTSTYNTLIDLYGKAGRLKDAANVFGEMLTTGISMDTITFNTMIYTCGSH 369
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
+AE + KM +P TY +++Y N+ A + + + ++G
Sbjct: 370 GHLAEAETLLLKMEERGLSPDTKTYNIFLSLYANDGNIDGALKCYRRIREVG-------- 421
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
LF PD T++ L ++ NM E V+ ++ ME+
Sbjct: 422 ------------------LF---------PDVVTHRALLHVLSERNMVEDVENVIAEMEK 454
Query: 459 NGIVPNK 465
+ I+ ++
Sbjct: 455 SHILLDE 461
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/319 (19%), Positives = 130/319 (40%), Gaps = 6/319 (1%)
Query: 125 WLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
W + +F W + D Y+ +I GK A LF M+N G PD YN
Sbjct: 511 WFEAESIFLWKRDLAGKKXDVMEYNVMIKAYGKAELYEKAFLLFKSMKNRGTWPDECTYN 570
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
+LI D + L Q+M KP T++ ++ + A+ + ++
Sbjct: 571 SLIQM-FSGGDLVDEARRLLTEMQRMG----FKPTCQTFSAVIASYARLGLMSDAVEVYD 625
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
+ + + P+ Y +++ + + G +E M+ + + I LI ++ K
Sbjct: 626 MMVHADVEPNEILYGVLVNGFAEIGQAEEALKYFRLMEKSGIAENQIVLTSLIKAFSKVG 685
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
+ + +++ + + ++ NSMI Y + +A+ VF+ + Y +++
Sbjct: 686 SLEDARRIYNRMKNMEDGADTIASNSMINLYADLGMVSEAKQVFEDLRERGYADG-VSFA 744
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
+I +Y + A E+ +E+ + G ++ ++E Y +NG E L
Sbjct: 745 TMIYLYKNIGMLDEAIEVAEEMKESGLLRDATSFRKVIECYAINGQVRECGELLHEMVTR 804
Query: 425 GVTPDSSTYKLLYKAYTKA 443
+ PD+ T+ +L+ K
Sbjct: 805 KLLPDNRTFNVLFTILKKG 823
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 117/260 (45%), Gaps = 1/260 (0%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
K +++ YN++++A +A ++ LFK + PD TYN ++ + ++ E
Sbjct: 528 KXDVMEYNVMIKAYGKAELYEKAFLLFKSMKNRGTWPDECTYNSLIQMFSGGDLVDEARR 587
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+L+ M+ KP TF+ +I SY + +V+ ++H+ +P + ++ +
Sbjct: 588 LLTEMQRMGFKPTCQTFSAVIASYARLGLMSDAVEVYDMMVHADVEPNEILYGVLVNGFA 647
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
+ +A F+ M + I +I + ++ AR I++ + +
Sbjct: 648 EIGQAEEALKYFRLMEKSGIAENQIVLTSLIKAFSKVGSLEDARRIYNRMKNMEDGADTI 707
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
N+M+ Y G+ +EA +FE+ G S ++Y Y M + ++ + M
Sbjct: 708 ASNSMINLYADLGMVSEAKQVFEDLRERGYADGVSFATMIY-LYKNIGMLDEAIEVAEEM 766
Query: 457 EQNGIVPNKRFFLEALETFS 476
+++G++ + F + +E ++
Sbjct: 767 KESGLLRDATSFRKVIECYA 786
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 128/309 (41%), Gaps = 53/309 (17%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIY-SKLIAVMGKKGQTRLAMWLFSEMRNS 174
F E+G+++ + L+ FR M+K IA+ I + LI K G A +++ M+N
Sbjct: 646 FAEIGQAE---EALKYFRLMEKSG--IAENQIVLTSLIKAFSKVGSLEDARRIYNRMKNM 700
Query: 175 GCRPDPSVYNALIT--AHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQ 232
D N++I A L +AK + F+ ++ ER + V++ ++
Sbjct: 701 EDGADTIASNSMINLYADLGMVSEAKQV------FEDLR--ERGYADGVSFATMIYLYKN 752
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+D+ + +E+ ES L D ++ V++ Y NG ++E +L M + + PD T
Sbjct: 753 IGMLDEAIEVAEEMKESGLLRDATSFRKVIECYAINGQVRECGELLHEMVTRKLLPDNRT 812
Query: 293 FNLLIDSYGK----------------------RQAFDKMEQVFKSL-MHSKEKPTLPTF- 328
FN+L K RQA + VF L +H+ + TF
Sbjct: 813 FNVLFTILKKGVIPLEAVSQLESAFHEEKTYARQAI--IAAVFSGLGLHASALESCDTFL 870
Query: 329 -----------NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
N I YG A KA +F KM P +TY ++ YG +
Sbjct: 871 KAEVQLDSFAYNVAIYAYGAAEKIDKALNIFMKMKDQNLKPDLVTYINLVGCYGKAGMIE 930
Query: 378 RAREIFDEL 386
++I+ +L
Sbjct: 931 GVKQIYSQL 939
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 93/226 (41%), Gaps = 32/226 (14%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L++ +G D + +EV M K+ + D + K+I GQ R L EM
Sbjct: 749 LYKNIGMLD---EAIEVAEEM-KESGLLRDATSFRKVIECYAINGQVRECGELLHEMVTR 804
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK--------------------GME 214
PD +N L T +A+++ F + K +E
Sbjct: 805 KLLPDNRTFNVLFTILKKGVIPLEAVSQLESAFHEEKTYARQAIIAAVFSGLGLHASALE 864
Query: 215 RCKP--------NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
C + YN+ + A A +D+ +F ++ + L PD+ TY ++ YG
Sbjct: 865 SCDTFLKAEVQLDSFAYNVAIYAYGAAEKIDKALNIFMKMKDQNLKPDLVTYINLVGCYG 924
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQV 312
K GMI+ ++ + S++K + + + F +I+++ +D ++ V
Sbjct: 925 KAGMIEGVKQIYSQLKYGEIELNKSLFFAIINTFRSADRYDLVQMV 970
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 160/358 (44%), Gaps = 7/358 (1%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ +EV++ M + YS L+ GK+ +WL EM + G +P+ Y
Sbjct: 200 EAMEVYKVMATD-GIVPSVRTYSVLMLAFGKR-DVETVVWLLREMEDHGVKPNVYSY--- 254
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
T + +A +A QKM+ E CKP++VT +L++ A V +F ++
Sbjct: 255 -TICIRVLGQAGRFEEAYKILQKMED-EGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKM 312
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
S PD TY ++D G NG + + + + MK++ +++ + ++D+ +
Sbjct: 313 KASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRV 372
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
D+ VF + +P ++NS+I + KA A +F M TP+ TY
Sbjct: 373 DEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLF 432
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I YG +A + ++ + G V NA+L + +G A +F ++GV
Sbjct: 433 INYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGV 492
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQS 484
PD+ TY ++ K +KA+ + K+ M + VP+ ++T + G+++
Sbjct: 493 CPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEA 550
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 176/407 (43%), Gaps = 32/407 (7%)
Query: 67 RSKRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWL 126
R+ + E E+ L R+L+ F PL+R L K K + + FE LG S K
Sbjct: 719 RAGMEKSIEFAENIALSRILLDDFF-LSPLIRHLCKSKKALEAHELVKKFESLGVSLK-- 775
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
TG Y+ LI + + +A LFSEM+ GC PD YN +
Sbjct: 776 ------------------TGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLI 817
Query: 187 ITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
+ A K+ + L ++M KG E VTYN ++ +++ + + L+
Sbjct: 818 LDA----MGKSMRIEDMLKVQKEMHCKGYES---TYVTYNTIISGLVKSKMLYEAMDLYY 870
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
+L +P TY ++D K+G I++ E + M CKP+ +N+L++ Y
Sbjct: 871 KLMSEGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAG 930
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA-RLQGKAEYVFQKMTAMKYTPSFITY 363
+K+ ++F++++ P + ++ +I A RL Y F+++T + P ITY
Sbjct: 931 NTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGRLNDSLSY-FRQLTELGLEPDLITY 989
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+I G + A +F+++ K G + T N+++ G EA ++E
Sbjct: 990 NLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLK 1049
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
G P+ TY L Y+ + + +M G PN +++
Sbjct: 1050 NGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGGCPPNSSTYMQ 1096
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 174/429 (40%), Gaps = 62/429 (14%)
Query: 82 LVRVLMRSFSDKEPL----VRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQK 137
L+ L++S D+E + V + V VR+ +L GK D +E W+ +
Sbjct: 188 LIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLML--AFGKRD-----VETVVWLLR 240
Query: 138 QRWYIADTGI------YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
+ + D G+ Y+ I V+G+ G+ A + +M + GC+PD LI
Sbjct: 241 E---MEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLI---- 293
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACA-------------------- 231
A ++ A F KMK ++ KP+ VTY LL C
Sbjct: 294 QILCDAGRVSDAKDVFWKMKASDQ-KPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGY 352
Query: 232 ---------------QARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
Q VD+ + +F ++ + + P Y+YN ++ + K +
Sbjct: 353 NDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALE 412
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-KPTLPTFNSMIINY 335
+ + M + P+ T+ L I+ YGK K + ++ LM SK P + N+++ +
Sbjct: 413 LFNHMNIHGPTPNGYTYVLFINYYGKSGESLKAIKRYE-LMKSKGIVPDVVAGNAVLYSL 471
Query: 336 GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
K+ G A+ VF ++ ++ P ITY +I N A ++F E+ + V
Sbjct: 472 AKSGRLGMAKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDV 531
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+N++++ G EA +F M + P TY L + + V LL+
Sbjct: 532 LAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEE 591
Query: 456 MEQNGIVPN 464
M N PN
Sbjct: 592 MNSNSYPPN 600
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 137/319 (42%), Gaps = 6/319 (1%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L ++ G + +E++ M K Y + Y+ ++ + + G+ A +F +M+
Sbjct: 327 LLDKCGDNGDSRSVIEIWNAM-KADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQK 385
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P YN+LI+ L KA L AL F M + PN TY + + ++
Sbjct: 386 GIEPQQYSYNSLISGFL----KADRLNHALELFNHMN-IHGPTPNGYTYVLFINYYGKSG 440
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ ++ + + PD+ N V+ + K+G + + V +KS PD IT+
Sbjct: 441 ESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYT 500
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++I K D+ +VF ++ ++ P + NS+I KA +A +F ++ M
Sbjct: 501 MMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEM 560
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P+ TY ++ G V + +E++ + T N +L+ C NG A
Sbjct: 561 NLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYA 620
Query: 415 DLLFENSHNMGVTPDSSTY 433
+ N G PD S+Y
Sbjct: 621 LGMLYNMTMKGCMPDLSSY 639
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 129/330 (39%), Gaps = 48/330 (14%)
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
L+ AH RD A+ F M+ + K N+ T+ + R+ +
Sbjct: 121 LMRAHGRVRDMAQV-------FDLMQ-RQIVKANVGTFLTIFRSLGMEGGLRSAPVALPM 172
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ E+ + + YTYNG++ K+G +E V M ++ P + T+++L+ ++GKR
Sbjct: 173 MKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAFGKRDV 232
Query: 306 ----------------------------------FDKMEQVFKSLMHSKEKPTLPTFNSM 331
F++ ++ + + KP + T +
Sbjct: 233 ETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVL 292
Query: 332 IINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR---EIFDELSK 388
I A A+ VF KM A P +TY IT+ C + +R EI++ +
Sbjct: 293 IQILCDAGRVSDAKDVFWKMKASDQKPDRVTY---ITLLDKCGDNGDSRSVIEIWNAMKA 349
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
G + V A+++A C G EA +F+ G+ P +Y L + KA+
Sbjct: 350 DGYNDNVVAYTAVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNH 409
Query: 449 VQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+L M +G PN ++ + + S
Sbjct: 410 ALELFNHMNIHGPTPNGYTYVLFINYYGKS 439
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 151/359 (42%), Gaps = 13/359 (3%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
G++D L L+ +R + D Y+ L+ K+ + A+ L EMR+ GC PD
Sbjct: 166 GRTDNALAVLDDML----RRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPD 221
Query: 180 PSVYNALITAHLHTR--DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
YN ++ D A K+L + C+PN V+YNI+L+ A +
Sbjct: 222 IVTYNVVVNGICQEGRVDDAMEFLKSLPSYG-------CEPNTVSYNIVLKGLCTAERWE 274
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
L E+ P++ T+N ++ + G+++ +L ++ C P+ +++N ++
Sbjct: 275 DAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPIL 334
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYT 357
++ K++ D+ + ++ S P + ++N+++ + A + ++ T
Sbjct: 335 HAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCT 394
Query: 358 PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLL 417
P I+Y +I A E+ +E+ G + T + + C G EA
Sbjct: 395 PVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKA 454
Query: 418 FENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
F +MG+ P++ Y + K L M NG +PN+ + +E +
Sbjct: 455 FCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLA 513
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 162/392 (41%), Gaps = 25/392 (6%)
Query: 79 SKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEH--CFLLFEELGKSDKWLQCLEVFRWMQ 136
S + +RVL+R D E +R + + S C L ++L S + + V +
Sbjct: 59 SNDRLRVLVRR-GDLEEAIRLVESMAGLEPSAAGPCAALIKKLCASGRTAEARRVLASCE 117
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
D Y+ ++A GQ A L + M PD YN LI L R +
Sbjct: 118 P------DVMSYNAMVAGYCVTGQLDNARRLVAAMPM---EPDTYTYNTLIRG-LCGRGR 167
Query: 197 AKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
AL M + R C P++VTY ILL A + Q L E+ + APDI
Sbjct: 168 TD---NALAVLDDM--LRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDI 222
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
TYN V++ + G + + L + S C+P+ +++N+++ + ++ E++
Sbjct: 223 VTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAE 282
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
+ P + TFN +I + L A + ++ TP+ ++Y I+ +
Sbjct: 283 MSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKK 342
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM---GVTPDSST 432
+ RA + + G + + N +L A C G E D E H + G TP +
Sbjct: 343 MDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGG---EVDAAVELLHQLKDKGCTPVLIS 399
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y + TKA E +LL M G+ P+
Sbjct: 400 YNTVIDGLTKAGKTEEALELLNEMVTKGLQPD 431
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 135/330 (40%), Gaps = 15/330 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT Y+ LI + +G+T A+ + +M GC PD Y L+ +A K
Sbjct: 151 DTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILL----------EATCKR 200
Query: 204 LGYFQKMKGMER-----CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
GY Q +K ++ C P+IVTYN+++ Q VD K L P+ +Y
Sbjct: 201 SGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSY 260
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N V+ ++ E +++ M P+++TFN+LI +R + ++ +
Sbjct: 261 NIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPK 320
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
P ++N ++ + K + +A + M + P ++Y ++T V
Sbjct: 321 YGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDA 380
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A E+ +L G + + N +++ G EA L G+ PD TY +
Sbjct: 381 AVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISS 440
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+ E K +++ GI PN +
Sbjct: 441 GLCREGRIEEAIKAFCKVQDMGIRPNTVLY 470
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 104/278 (37%), Gaps = 14/278 (5%)
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
L +A+ + M G+E ++ + CA R + L + PD+ +YN
Sbjct: 72 LEEAIRLVESMAGLEPSAAGPCA-ALIKKLCASGRTAEARRVL------ASCEPDVMSYN 124
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
++ Y G + +++ M +PD T+N LI R D V ++
Sbjct: 125 AMVAGYCVTGQLDNARRLVAAMPM---EPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRR 181
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VS 377
P + T+ ++ K +A + +M P +TY ++ G C V
Sbjct: 182 GCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVN--GICQEGRVD 239
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
A E L G + + N +L+ C +A+ L G P+ T+ +L
Sbjct: 240 DAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLI 299
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ + E ++L ++ + G PN + L F
Sbjct: 300 SFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAF 337
>gi|159464329|ref|XP_001690394.1| hypothetical protein CHLREDRAFT_114572 [Chlamydomonas reinhardtii]
gi|158279894|gb|EDP05653.1| predicted protein [Chlamydomonas reinhardtii]
Length = 287
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 136/289 (47%), Gaps = 5/289 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I+ G Q R A+ L +EMR+ G + Y+AL+ + KA L A +
Sbjct: 3 YTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCI----KANELDLAQDVY 58
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M E C PN+VTYNIL+ A R + L L S + ++ TYN V+ A K
Sbjct: 59 KQML-EEGCSPNLVTYNILIDVEASKRKTTERRRLAVALVRSGIQAEVRTYNTVISACNK 117
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+G ++ V +M + KP T+ LI +YGK+ +K +F+ ++ + + T
Sbjct: 118 SGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRRGCERNVIT 177
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
++S+I KA A +F KM P+ +TY +I + + +A E+F+++
Sbjct: 178 YSSLISACEKAGRWEMALELFSKMHKENCKPNVVTYNSLIAACSHGGHWEKASELFEQMQ 237
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
G T ++ AY G A FE + G PD++ + L
Sbjct: 238 TQGCKPDSITYCGLITAYERGGQWRRALKAFEQMQSQGCHPDAAVFNSL 286
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 117/253 (46%), Gaps = 6/253 (2%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
N+ TY+ L+ C +A +D ++K++ E +P++ TYN ++D E +
Sbjct: 34 NVHTYSALMNVCIKANELDLAQDVYKQMLEEGCSPNLVTYNILIDVEASKRKTTERRRLA 93
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
+ + + ++ T+N +I + K ++ +V++ ++ + KP+ T+ ++I YGK
Sbjct: 94 VALVRSGIQAEVRTYNTVISACNKSGQPEQALKVYEKMLAAGVKPSATTYTALISAYGKK 153
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR---AREIFDELSKLGKDMKV 395
KA +F+ M + ITY +I+ C+ R A E+F ++ K V
Sbjct: 154 GQVEKALDIFRDMIRRGCERNVITYSSLISA---CEKAGRWEMALELFSKMHKENCKPNV 210
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
T N+++ A G +A LFE G PDS TY L AY + K ++
Sbjct: 211 VTYNSLIAACSHGGHWEKASELFEQMQTQGCKPDSITYCGLITAYERGGQWRRALKAFEQ 270
Query: 456 MEQNGIVPNKRFF 468
M+ G P+ F
Sbjct: 271 MQSQGCHPDAAVF 283
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 130/288 (45%), Gaps = 6/288 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ + G + + LE+ M + R + YS L+ V K + LA ++ +M
Sbjct: 6 MISQCGSHQQLRRALELVAEM-RSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQMLEE 64
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC P+ YN LI R + A+ + G++ + TYN ++ AC ++
Sbjct: 65 GCSPNLVTYNILIDVEASKRKTTERRRLAVALVRS--GIQ---AEVRTYNTVISACNKSG 119
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+Q +++++ + + P TY ++ AYGK G +++ + M C+ ++IT++
Sbjct: 120 QPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRRGCERNVITYS 179
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
LI + K ++ ++F + KP + T+NS+I KA +F++M
Sbjct: 180 SLISACEKAGRWEMALELFSKMHKENCKPNVVTYNSLIAACSHGGHWEKASELFEQMQTQ 239
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
P ITY +IT Y RA + F+++ G + N+++
Sbjct: 240 GCKPDSITYCGLITAYERGGQWRRALKAFEQMQSQGCHPDAAVFNSLM 287
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 115/243 (47%)
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
TY ++ C + + + L E+ + +++TY+ +M+ K + + V +M
Sbjct: 2 TYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQM 61
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
C P+++T+N+LID ++ + ++ +L+ S + + T+N++I K+
Sbjct: 62 LEEGCSPNLVTYNILIDVEASKRKTTERRRLAVALVRSGIQAEVRTYNTVISACNKSGQP 121
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
+A V++KM A PS TY +I+ YG V +A +IF ++ + G + V T +++
Sbjct: 122 EQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRRGCERNVITYSSL 181
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ A G A LF H P+ TY L A + E +L ++M+ G
Sbjct: 182 ISACEKAGRWEMALELFSKMHKENCKPNVVTYNSLIAACSHGGHWEKASELFEQMQTQGC 241
Query: 462 VPN 464
P+
Sbjct: 242 KPD 244
>gi|302808035|ref|XP_002985712.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
gi|300146621|gb|EFJ13290.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
Length = 447
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 162/354 (45%), Gaps = 47/354 (13%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y L+ K G+ + A+ L EM+++G RP+ ++ +I L T A +++AL +F
Sbjct: 33 YGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRG-LCT---AGKVSQALLHF 88
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+++ E C PN+ TY+ L+ A ++ + L E+ + +P++ TYN ++D + K
Sbjct: 89 RRIG--EDCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRK 146
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ E+ +L M C+ D+IT+ +++D + K + D+ ++ +L EK + T
Sbjct: 147 LERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNAL----EKRNVVT 202
Query: 328 FNSMIINYGKARLQGKAEYV--FQKMTAMKYTPSFI-----------------TYECIIT 368
+NS+ A E + +KM P+ + Y+ +++
Sbjct: 203 YNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLS 262
Query: 369 MYGY---CDNVS---------RAREIFDELSKLGK------DMKVSTLNAMLEAYCMNGL 410
MY D+VS A +D L LG+ + T+N ++ +C G
Sbjct: 263 MYSQGCKTDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGD 322
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA LF++ + G P + TY L A+ KA + KLL +M Q PN
Sbjct: 323 LHEAHQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPN 376
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 132/320 (41%), Gaps = 11/320 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS L+ + K GQ A L +EM GC P+ YNALI K + L + L
Sbjct: 102 YSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGF----RKLERLDEVLMLL 157
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY-- 265
++M C+ +++TY ++L + ++D+ L L + ++ TYN + A
Sbjct: 158 KEMS-QRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKR----NVVTYNSLFTALST 212
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ E S+L +M +P+ + + ++ K D+ QV S+ K
Sbjct: 213 AEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDD 272
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
++ +++ + A + + +M Y T +I + ++ A ++F
Sbjct: 273 VSYKILVVAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKS 332
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ + G T N ++ A+C P A L P+ TY + K++ +
Sbjct: 333 MYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQR 392
Query: 446 KELVQKLLKRMEQNGIVPNK 465
+E + + + M NG P++
Sbjct: 393 EEEARGIFQMMVDNGCFPDR 412
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 104/237 (43%), Gaps = 11/237 (4%)
Query: 130 EVFRWMQ--KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
E +R + ++R + +++ L G + T A+ L +M G RP+ Y ++
Sbjct: 187 EAYRLLNALEKRNVVTYNSLFTALSTAEGDR--TTEALSLLEKMIQEGTRPNQVNYRTVL 244
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA-RNVDQVNALFKEL 246
+A L + + CK + V+Y IL+ A A A R D + L + L
Sbjct: 245 LMLCKNSRLDEAYQVLLSMYS-----QGCKTDDVSYKILVVAFANAGRTYDSLELLGRML 299
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
+ D T N V+ + K G + E + M P +T+N LI ++ K Q
Sbjct: 300 GSGYIL-DTKTMNVVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQP 358
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
D ++ ++ + KP + T+NS+I ++ + + + +A +FQ M P ++Y
Sbjct: 359 DTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDNGCFPDRVSY 415
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 6/190 (3%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L K+ + + +V M Q D Y L+ G+T ++ L M SG
Sbjct: 247 LCKNSRLDEAYQVLLSMYSQGCKTDDVS-YKILVVAFANAGRTYDSLELLGRMLGSGYIL 305
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
D N +I H KA L +A F+ M P+ VTYN L+ A +A+ D
Sbjct: 306 DTKTMNVVI----HKFCKAGDLHEAHQLFKSMY-QRGSIPSNVTYNTLIGAFCKAQQPDT 360
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
L ++ ++ P++ TYN ++ ++ + +E + M N C PD +++ L
Sbjct: 361 AVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDNGCFPDRVSYTTLKL 420
Query: 299 SYGKRQAFDK 308
S + +D+
Sbjct: 421 SKNEAAIYDQ 430
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH---TRDKAKALAKAL 204
Y ++ ++ K + A + M + GC+ D Y L+ A + T D + L + L
Sbjct: 240 YRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFANAGRTYDSLELLGRML 299
Query: 205 G--YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
G Y K M N+++ +A ++ + + LFK +++ P TYN ++
Sbjct: 300 GSGYILDTKTM----------NVVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNVTYNTLI 349
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
A+ K +L +M KP++IT+N +I S+ + Q ++ +F+ ++ +
Sbjct: 350 GAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDNGCF 409
Query: 323 PTLPTFNSMIINYGKARL 340
P ++ ++ ++ +A +
Sbjct: 410 PDRVSYTTLKLSKNEAAI 427
>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 139/308 (45%), Gaps = 12/308 (3%)
Query: 165 MW-LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
MW L++ M + P YN L+ A D +A K+L KG+E P +V Y
Sbjct: 170 MWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRA--KSLISEMVKKGIE---PTVVIY 224
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
L+ + + ++F+++ +S + P++YTYN +MD Y K +K+ + M
Sbjct: 225 TTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLD 284
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+ +P+++TF +LID+ K + + F + P + FNS+I Y KA +
Sbjct: 285 DGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSE 344
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A + +M K +P TY +I V A +I + K G N++++
Sbjct: 345 ATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLID 404
Query: 404 AYCMNGLPTEADLLFE------NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
YC G +A +F+ + G+ PD+ Y ++ + + A V L M
Sbjct: 405 GYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAVMLQGHLNAKHMADVMMLHADMI 464
Query: 458 QNGIVPNK 465
+ GIVPN+
Sbjct: 465 KMGIVPNE 472
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 135/300 (45%), Gaps = 16/300 (5%)
Query: 168 FSEMRNSGCRPDPSVYNALITA--HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNI 225
S++R G + +PSV+ LI A + D+A + +G F P + N
Sbjct: 109 LSQLR--GSKFNPSVFGVLIIAFSEVGLVDEALRVYLKVGAF----------PAVQACNA 156
Query: 226 LLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ 285
LL + + D + L+ + L P + TYN ++DA + G + +S++S M
Sbjct: 157 LLNGLLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKG 216
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
+P ++ + LI + E +F+ + S P L T+N ++ Y K +A
Sbjct: 217 IEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQAL 276
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+++Q M P+ +T+ +I + AR F +++K G V N++++ Y
Sbjct: 277 HLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGY 336
Query: 406 CMNGLPTEA-DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G +EA DLL E ++PD TY +L K + E +LKRME+ G+ N
Sbjct: 337 SKAGNCSEATDLLLE-MEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPAN 395
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 105/214 (49%), Gaps = 16/214 (7%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
IY+ LI + + + A +F +M++SG P+ YN L+ + T + + +AL
Sbjct: 223 IYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTAN----VKQALHL 278
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+Q M + +PN+VT+ IL+ A + R + F ++ + + P++ +N ++D Y
Sbjct: 279 YQGMLD-DGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYS 337
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K G E +L M+ + PD+ T+++LI + + ++ + + K + EK +P
Sbjct: 338 KAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRM----EKEGVP 393
Query: 327 ----TFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
+NS+I Y K +G E + A K+
Sbjct: 394 ANSVVYNSLIDGYCK---EGNMEKALEIFKATKF 424
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 117/256 (45%), Gaps = 11/256 (4%)
Query: 226 LLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD-AYGKNGMIKEMESVLSRMKSN 284
LL++C R V +L S P ++ GV+ A+ + G++ E V ++ +
Sbjct: 92 LLQSCTPRRVNSLVFNALSQLRGSKFNPSVF---GVLIIAFSEVGLVDEALRVYLKVGAF 148
Query: 285 QCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
P + N L++ K+ +FD M +++ +++ + PT+ T+N ++ + +A
Sbjct: 149 ---PAVQACNALLNGLLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRA 205
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAML 402
+ + +M P+ + Y +I +G C + A +F ++ G + T N ++
Sbjct: 206 KSLISEMVKKGIEPTVVIYTTLI--HGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLM 263
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+ YC +A L++ + G+ P+ T+ +L A K ++ +M + G+V
Sbjct: 264 DGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVV 323
Query: 463 PNKRFFLEALETFSSS 478
PN F ++ +S +
Sbjct: 324 PNVVVFNSLIDGYSKA 339
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 3/131 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA-- 201
D YS LI + G A + M G + VYN+LI + + KAL
Sbjct: 360 DVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIF 419
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
KA +F M+ +P+ + Y ++L+ A+++ V L ++ + + P+ T V
Sbjct: 420 KATKFFSDMR-RNGLRPDALAYAVMLQGHLNAKHMADVMMLHADMIKMGIVPNEVTSQVV 478
Query: 262 MDAYGKNGMIK 272
Y NG +K
Sbjct: 479 RRGYQDNGYLK 489
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 128/268 (47%), Gaps = 8/268 (2%)
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY---GKNGMI 271
+ +PN+ T+N+++ A + +++ + +++ +P++ +YN ++D Y G NG +
Sbjct: 218 KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKM 277
Query: 272 KEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM 331
+ ++VL M N+ P++ TFN+LID + K +VFK ++ P + T+NS+
Sbjct: 278 YKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSL 337
Query: 332 IINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKL 389
I +A + KM + P+ ITY +I G+C N + A ++FD +
Sbjct: 338 INGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLIN--GFCKNGMMKEALDMFDSVKGQ 395
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
G N +++AYC G + L E G+ PD TY L + E
Sbjct: 396 GTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455
Query: 450 QKLLKRMEQNGIVPNKRFFLEALETFSS 477
+KL ++ G+ P+ F +E + S
Sbjct: 456 KKLFDQLTNKGL-PDLVTFHILMEGYCS 482
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 149/316 (47%), Gaps = 13/316 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ +I + K G+ A + +M+ G P+ YN LI + K + KA
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGK-MYKADAVL 284
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M E PN+ T+NIL+ + N+ +FKE+ + + P++ TYN +++
Sbjct: 285 KEMVENE-VSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCN 343
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G I E + +M S +P++IT++ LI+ + K + +F S+ +PT
Sbjct: 344 GGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRM 403
Query: 328 FNSMIINYGKARLQGKAEYVF---QKMTAMKYTPSFITYECIITMYGYC--DNVSRAREI 382
+N +I Y K GK + F ++M P TY C+I G C N+ A+++
Sbjct: 404 YNMLIDAYCKL---GKIDDGFALKEEMEREGIVPDVGTYNCLIA--GLCRNGNIEAAKKL 458
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
FD+L+ G + T + ++E YC G +A +L + MG+ P TY ++ K Y K
Sbjct: 459 FDQLTNKGLP-DLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCK 517
Query: 443 ANMKELVQKLLKRMEQ 458
+ + +ME+
Sbjct: 518 EGNLKAATNMRTQMEK 533
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 169/362 (46%), Gaps = 35/362 (9%)
Query: 128 CLEVFRWMQKQRWYIADTGIYSKLI-AVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
CL + W+ K R + KL+ ++ K +++ +L +RN S+++A+
Sbjct: 84 CLRYYTWLVKNRDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAI 143
Query: 187 ----------ITAHLHTRDKA---------KALAKALGYFQKMKGMERCKPNIVTYNILL 227
I A + A +A ++ Y K+ M CKP +V LL
Sbjct: 144 SMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSAMS-CKPLMVA---LL 199
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
+ Q R+ D V L+KE+ + P+++T+N V++A K G + + V+ MK
Sbjct: 200 K---QNRSAD-VEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYS 255
Query: 288 PDIITFNLLIDSYGKRQAFDKM---EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKA 344
P+++++N LID Y K KM + V K ++ ++ P L TFN +I + K +
Sbjct: 256 PNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGS 315
Query: 345 EYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAML 402
VF++M P+ ITY +I G C+ ++ A + D++ G + T ++++
Sbjct: 316 LKVFKEMLDQDVIPNVITYNSLIN--GLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLI 373
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+C NG+ EA +F++ G P + Y +L AY K + L + ME+ GIV
Sbjct: 374 NGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 463 PN 464
P+
Sbjct: 434 PD 435
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 7/185 (3%)
Query: 145 TGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKAL 204
T +Y+ LI K G+ L EM G PD YN LI R+ AK L
Sbjct: 401 TRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGL--CRNGNIEAAKKL 458
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
KG+ P++VT++IL+ + L KE+ + L P TYN +M
Sbjct: 459 FDQLTNKGL----PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKG 514
Query: 265 YGKNGMIKEMESVLSRM-KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
Y K G +K ++ ++M K + + ++ ++N+L+ Y ++ + + ++ P
Sbjct: 515 YCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVP 574
Query: 324 TLPTF 328
T+
Sbjct: 575 NRITY 579
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 11/180 (6%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
+LGK D E ++ + D G Y+ LIA + + G A LF ++ N G
Sbjct: 413 KLGKIDDGFALKEEM----EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL- 467
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
PD ++ L+ + +R +++ A L KM KP +TYNI+++ + N+
Sbjct: 468 PDLVTFHILMEGYC-SRGESRKAAMLLKEMSKMG----LKPRHLTYNIMMKGYCKEGNLK 522
Query: 238 QVNALFKELH-ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
+ ++ E L ++ +YN ++ Y + G +++ +L+ M P+ IT+ ++
Sbjct: 523 AATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Query: 158 KGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCK 217
+G++R A L EM G +P YN ++ + K L A +M+ R +
Sbjct: 483 RGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYC----KEGNLKAATNMRTQMEKERRLR 538
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
N+ +YN+LL+ +Q ++ N L E+ E L P+ TY V + G + ++E
Sbjct: 539 MNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKGFVPDIEGH 598
Query: 278 L 278
L
Sbjct: 599 L 599
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 158/370 (42%), Gaps = 50/370 (13%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
R D G + ++ + +G A+ L ++ + GC PD YNA++ K
Sbjct: 186 RGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVL--------KGL 237
Query: 199 ALAKALGYFQK-MKGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
+AK G Q+ M+ M R C PNIVT+N L+ + ++V+ + ++ E PDI
Sbjct: 238 CMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDI 297
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI------------------------- 290
Y ++D K G +K +L+RM S KP++
Sbjct: 298 RMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAE 357
Query: 291 ----------ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
+TFN+L+D + + D++ ++ + ++ P + T+ ++I + K L
Sbjct: 358 MFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGL 417
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTL 398
+A + + MTA P+ I+Y I + G C + A ++ ++ + G + T
Sbjct: 418 IDEAVMLLKSMTACGCKPNTISYT--IVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITF 475
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N ++ C GL +A L + G +PD +Y + KA + +LL M
Sbjct: 476 NTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVN 535
Query: 459 NGIVPNKRFF 468
G+ PN +
Sbjct: 536 KGMSPNTIIY 545
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 147/354 (41%), Gaps = 36/354 (10%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA---------------HLH 192
Y ++ + +G+ A+ + EM GC P P +Y+ ++ A LH
Sbjct: 125 YFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLH 184
Query: 193 TRDKA----------------KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
R A ++ KAL + + C+P++V+YN +L+ A+
Sbjct: 185 ARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFG-CEPDVVSYNAVLKGLCMAKRW 243
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
V L +E+ P+I T+N ++ +NG+ + + VL++M + C PDI + +
Sbjct: 244 GCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATI 303
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
ID K ++ + KP + +N+++ A + E + +M
Sbjct: 304 IDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDC 363
Query: 357 TPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+T+ ++ +C N V R E+ +++ G V T ++ +C GL EA
Sbjct: 364 PLDDVTFNILVDF--FCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEA 421
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+L ++ G P++ +Y ++ K A + L+ +M Q G N F
Sbjct: 422 VMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITF 475
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 143/326 (43%), Gaps = 7/326 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +Y+ +I + K+G ++A + + M + G +P+ YN L+ L + ++ + +
Sbjct: 296 DIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKG-LCSAERWEETEEL 354
Query: 204 LG-YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
L F K C + VT+NIL+ Q VD+V L +++ PD+ TY V+
Sbjct: 355 LAEMFDK-----DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVI 409
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+ + K G+I E +L M + CKP+ I++ +++ + + E + ++
Sbjct: 410 NGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCP 469
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
TFN++I K L +A + ++M +P I+Y +I G A E+
Sbjct: 470 LNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALEL 529
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+ + G +++ A G + +F+N + + D+ Y + + K
Sbjct: 530 LNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCK 589
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFF 468
E + L M +G VPN+ +
Sbjct: 590 RGETERAIEFLAYMVSSGCVPNESTY 615
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 119/277 (42%), Gaps = 14/277 (5%)
Query: 183 YNALITAHLHTR--DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQV 239
YNA++ + + A+ LA A+ PN TY ++RA CA+ R D +
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAVPV----------PPNAYTYFPVVRALCARGRIADAL 142
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
A+ E+ AP Y+ +++A + G + VL + + C D+ NL++++
Sbjct: 143 -AVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNA 201
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
+ + DK + + L +P + ++N+++ A+ G + + ++M M P+
Sbjct: 202 ICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPN 261
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
+T+ +I+ R E+ ++++ G + +++ C G A +
Sbjct: 262 IVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILN 321
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
+ G+ P+ Y L K A E ++LL M
Sbjct: 322 RMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEM 358
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 144/344 (41%), Gaps = 27/344 (7%)
Query: 143 ADTGIYSKLIAVMGKKGQTRLAM------WLFSEMRNSGCR-----------PDPSVYNA 185
AD +S +I ++ KKG A S M + C+ P ++N
Sbjct: 247 ADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNT 306
Query: 186 LITAHLHTRDKAKALAKALGYFQKMKGMER--CKPNIVTYNILLRACAQARNVDQVNALF 243
LI H K+K L + FQ+MK M+ C PN+ TYNI++ +A+ +D+ L
Sbjct: 307 LI----HAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELV 362
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR 303
E+ L+PD+ TY+ ++D K G + +L M PD T ++++ K
Sbjct: 363 NEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKA 422
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
D +++ P L T+N+++ KA +A KM A K TP +Y
Sbjct: 423 GKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSY 482
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
IIT + A IF E+ K G +++L+ NGL DL E
Sbjct: 483 TIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLE---DLALELLKT 539
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
PD +K++ KA E ++++RM G P F
Sbjct: 540 SLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGF-PADAF 582
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 170/418 (40%), Gaps = 64/418 (15%)
Query: 103 YVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTR 162
Y V + +CFL + L K++ E F+ MQ+ R Y D YS ++ + K G+
Sbjct: 34 YQHSVFTYNCFL--DALAKANAGQLAYEKFQQMQR-RGYPPDDFTYSIVLRGLCKAGELD 90
Query: 163 LAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVT 222
A L ++R SG + + Y+ +I KA + AL F+ M C P++VT
Sbjct: 91 KAKELLGQLRESGVKLNVITYSVVIDGCC----KASRVDDALEIFKTMSAGGGCVPDVVT 146
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
+N LL+ + + LF+ + ++ P++ +Y+ ++D K G + E + M
Sbjct: 147 FNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMV 206
Query: 283 SNQCKPDIITF------------------------------------------------- 293
C PD++ +
Sbjct: 207 EKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAE 266
Query: 294 ---NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
N +I+ + D+ + F+ ++ P+ FN++I K++ +FQ+
Sbjct: 267 EAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQR 326
Query: 351 MTAMK---YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
M +MK P+ TY ++ + A+E+ +E++ G V T +A+++ C
Sbjct: 327 MKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCK 386
Query: 408 NG-LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
G L DLL E S GV PDS T + A +KA + L+ M+ G P+
Sbjct: 387 LGKLDRACDLLEEMSKE-GVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPD 443
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 144/351 (41%), Gaps = 29/351 (8%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS L+ + K G+ A L+ EM C PD Y + +T KA +A+A
Sbjct: 182 YSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLC----KANRVAEACDCC 237
Query: 208 QKM--KGMERCKPNIVTYNILLRACA------QARN-----------VDQVNALFKELHE 248
+KM KG K + V ++ ++ +A+N +D+ F+E+
Sbjct: 238 RKMVTKGS---KADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMIS 294
Query: 249 SILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ---CKPDIITFNLLIDSYGKRQA 305
P +N ++ A K+ + + + RMKS + C P++ T+N+++D+ K +
Sbjct: 295 RNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQ 354
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
D+ +++ + + P + T+++++ K +A + ++M+ P T
Sbjct: 355 LDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDAS 414
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
I+ V A + + G + T N +L+ C G EA
Sbjct: 415 ILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAK 474
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
TPD +Y ++ A ++ + + M + G++P+ + L+ +
Sbjct: 475 CTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLA 525
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 80/195 (41%), Gaps = 16/195 (8%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
GK D L LE K R D Y+ L+ + K G+ A+ ++M + C PD
Sbjct: 423 GKVDYALSHLETM----KARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPD 478
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVD 237
Y +ITA + A A A FQ+M +G+ P+ V Y+ LL A+ D
Sbjct: 479 VFSYTIIITALCRSGQAAGAHA----IFQEMVKRGV---LPDTVLYHSLLDGLARNGLED 531
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
L K S+ PD + V+D K G ++ V+ RM D T+ ++
Sbjct: 532 LALELLK---TSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVV 588
Query: 298 DSYGKRQAFDKMEQV 312
K DK Q+
Sbjct: 589 RGLRKLGKVDKARQL 603
>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
Length = 680
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 157/333 (47%), Gaps = 13/333 (3%)
Query: 137 KQRWYIADTGIYSKLIAVMGK--KGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR 194
+Q Y +D YS +I + + K + + + L+ E+ D + N +I +
Sbjct: 195 RQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSG 254
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
D +KAL + LG Q G+ +V+ ++ A A + + ALF+EL +S + P
Sbjct: 255 DPSKAL-QLLGMAQA-TGLSAKTATLVS---IISALADSGRTLEAEALFEELRQSGIKPR 309
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
YN ++ Y K G +K+ ES++S M+ PD T++LLID+Y ++ V K
Sbjct: 310 TRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLK 369
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECIITMYG 371
+ +P F+ ++ + R +G+ + FQ + MK P Y +I +G
Sbjct: 370 EMEAGDVQPNSFVFSRLLAGF---RDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFG 426
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ + A FD + G + T N +++ +C +G A+ +FE G P ++
Sbjct: 427 KFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCAT 486
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
TY ++ +Y + +++LL +M+ GI+PN
Sbjct: 487 TYNIMINSYGDQERWDDMKRLLGKMKSQGILPN 519
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 158/379 (41%), Gaps = 34/379 (8%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
F + G K LQ L M + A T +I+ + G+T A LF E+R SG
Sbjct: 250 FAKSGDPSKALQLL----GMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSG 305
Query: 176 CRPDPSVYNALITAHLHT---RDKAKALAKA---------------------LGYFQK-- 209
+P YNAL+ ++ T +D +++ G ++
Sbjct: 306 IKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESAR 365
Query: 210 --MKGME--RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+K ME +PN ++ LL + + KE+ + PD YN V+D +
Sbjct: 366 IVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTF 425
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
GK + + RM S +PD +T+N LID + K E++F+++ P
Sbjct: 426 GKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCA 485
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+N MI +YG + + KM + P+ +T+ ++ +YG + A E +E
Sbjct: 486 TTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEE 545
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ +G + NA++ AY GL +A F + G+ P L A+ +
Sbjct: 546 MKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRR 605
Query: 446 KELVQKLLKRMEQNGIVPN 464
+L+ M++NG+ P+
Sbjct: 606 DAEAFAVLQYMKENGVKPD 624
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 162/377 (42%), Gaps = 45/377 (11%)
Query: 92 DKEPLVRTLNKYVKVVRSEHCF-LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSK 150
D E +V + K V EH + LL + + +W V + M+ ++ ++S+
Sbjct: 328 DAESMVSEMEKR-GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQ-PNSFVFSR 385
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
L+A +G+ + + EM++ G +PD YN +I T K L A+ F +M
Sbjct: 386 LLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVI----DTFGKFNCLDHAMTTFDRM 441
Query: 211 KGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG 269
E +P+ VT+N L+ C R++ +F+ + P TYN ++++YG
Sbjct: 442 LS-EGIEPDRVTWNTLIDCHCKHGRHI-VAEEMFEAMERRGCLPCATTYNIMINSYGDQE 499
Query: 270 MIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFN 329
+M+ +L +MKS P+++T L+D YGK F+ + + + KP+ +N
Sbjct: 500 RWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYN 559
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
++I Y + L +A F+ MT+ PS +
Sbjct: 560 ALINAYAQRGLSEQAVNAFRVMTSDGLKPSLL---------------------------- 591
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
LN+++ A+ + EA + + GV PD TY L KA + + + V
Sbjct: 592 -------ALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKV 644
Query: 450 QKLLKRMEQNGIVPNKR 466
+ + M +G P+++
Sbjct: 645 PVVYEEMIMSGCKPDRK 661
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 114/255 (44%), Gaps = 7/255 (2%)
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y+IL+ A ++ + + F + L P TYN ++ A +N I++ +++++M+
Sbjct: 141 YSILIHALGRSEKLYEA---FLLSQKQTLTP--LTYNALIGACARNNDIEKALNLIAKMR 195
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDK--MEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
+ + D + ++L+I S + D + +++K + K + + N +I+ + K+
Sbjct: 196 QDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGD 255
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNA 400
KA + A + T II+ A +F+EL + G + NA
Sbjct: 256 PSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNA 315
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNG 460
+L+ Y G +A+ + GV+PD TY LL AY A E + +LK ME
Sbjct: 316 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 375
Query: 461 IVPNKRFFLEALETF 475
+ PN F L F
Sbjct: 376 VQPNSFVFSRLLAGF 390
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 146/323 (45%), Gaps = 9/323 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI + K A+ LF++M +G RP+ YNAL+T A +
Sbjct: 191 YTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA-----AWL 245
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ R +PN++T+ L+ A + + + L+ + + + PD++TY +++
Sbjct: 246 LRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G++ E + M+ N C P+ + + LI + K + + ++F + T
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDE 385
+ +I Y A+ VF +M++ + P TY ++ G C N V +A IF+
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLD--GLCCNGKVEKALMIFEY 423
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ K D+ + T +++ C G +A LF + + G+ P+ TY + + + +
Sbjct: 424 MRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGL 483
Query: 446 KELVQKLLKRMEQNGIVPNKRFF 468
L K+M+++G +PN+ +
Sbjct: 484 IHEADSLFKKMKEDGFLPNESVY 506
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 127/275 (46%), Gaps = 9/275 (3%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A +M G PD + +L+ + H + A+ F ++ GM KPN+VTY
Sbjct: 137 ASCFLGKMMKLGFEPDLVTFTSLLNGYCH----WNRIEDAIALFDQILGMGF-KPNVVTY 191
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
L+R + R+++ LF ++ + P++ TYN ++ + G + +L M
Sbjct: 192 TTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMK 251
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+ +P++ITF LID++ K + ++++ ++ P + T+ S+I L +
Sbjct: 252 RRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDE 311
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAM 401
A +F M P+ + Y +I +G+C + V +IF E+S+ G T +
Sbjct: 312 ARQMFYLMERNGCYPNEVIYTTLI--HGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVL 369
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
++ YC+ G P A +F + PD TY +L
Sbjct: 370 IQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVL 404
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 135/301 (44%), Gaps = 5/301 (1%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ LF+ M +S RP PS+ + T L K + F++M+ + P + T
Sbjct: 67 ALDLFTRMVHS--RPLPSIID--FTRLLSVIAKMNRYDVVISLFEQMQILG-IPPLLCTC 121
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
NI++ + + + ++ + PD+ T+ +++ Y I++ ++ ++
Sbjct: 122 NIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILG 181
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
KP+++T+ LI K + + ++F + + +P + T+N+++ + G
Sbjct: 182 MGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGD 241
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A ++ + M + P+ IT+ +I + + A+E+++ + ++ V T +++
Sbjct: 242 AAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
CM GL EA +F G P+ Y L + K+ E K+ M Q G+V
Sbjct: 302 GLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA 361
Query: 464 N 464
N
Sbjct: 362 N 362
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 142/322 (44%), Gaps = 11/322 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
+++L++V+ K + + + LF +M+ G P N ++ + +A + LG
Sbjct: 86 FTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRA-SCFLGKM 144
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
K+ G E P++VT+ LL ++ ALF ++ P++ TY ++ K
Sbjct: 145 MKL-GFE---PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCK 200
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
N + + ++M +N +P+++T+N L+ + + + + +M + +P + T
Sbjct: 201 NRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT 260
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII---TMYGYCDNVSRAREIFD 384
F ++I + K +A+ ++ M M P TY +I MYG D AR++F
Sbjct: 261 FTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLD---EARQMFY 317
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ + G ++ +C + + +F GV ++ TY +L + Y
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG 377
Query: 445 MKELVQKLLKRMEQNGIVPNKR 466
++ Q++ +M P+ R
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIR 399
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 121/279 (43%), Gaps = 7/279 (2%)
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
AL F +M R P+I+ + LL A+ D V +LF+++ + P + T N VM
Sbjct: 67 ALDLFTRMVH-SRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVM 125
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+ L +M +PD++TF L++ Y + +F ++ K
Sbjct: 126 HCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFK 185
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR---A 379
P + T+ ++I K R A +F +M P+ +TY ++T G C+ + R A
Sbjct: 186 PNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVT--GLCE-IGRWGDA 242
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
+ ++ K + V T A+++A+ G EA L+ M V PD TY L
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
Query: 440 YTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ + +++ ME+NG PN+ + + F S
Sbjct: 303 LCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKS 341
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 112/252 (44%), Gaps = 10/252 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + K K ++ E++ M + Y D Y LI + G A +F M +
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVY-PDVFTYGSLINGLCMYGLLDEARQMFYLMERN 322
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQ 232
GC P+ +Y LI H K+K + + F +M KG+ N +TY +L++
Sbjct: 323 GCYPNEVIYTTLI----HGFCKSKRVEDGMKIFYEMSQKGV---VANTITYTVLIQGYCL 375
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
D +F ++ PDI TYN ++D NG +++ + M+ + +I+T
Sbjct: 376 VGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVT 435
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+ ++I K + +F SL KP + T+ +MI + + L +A+ +F+KM
Sbjct: 436 YTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495
Query: 353 AMKYTPSFITYE 364
+ P+ Y+
Sbjct: 496 EDGFLPNESVYK 507
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 160/358 (44%), Gaps = 13/358 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + K+ +W +VF M R D +Y+ LI + ++G+ + A + +M
Sbjct: 189 LLQGYCKAGRWECVSKVFEEMSG-RGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMER 247
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P+ YN LI + +A++ +K + + VTYN L+ +
Sbjct: 248 GLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVAL-----DAVTYNTLITGLSGVL 302
Query: 235 NVDQVNALFKEL--HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
+D+ L +E+ E+++ P++ T+N V+ K G +++ V M N C +++T
Sbjct: 303 EMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVT 362
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
FNLLI + K ++ + S +P T++ +I + K +AE + KM
Sbjct: 363 FNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMR 422
Query: 353 AMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
P + Y I + C+ + +AR FDE+ K K + V + M+ C
Sbjct: 423 RDGIEPELVHY--IPLLAALCEQGMMEQARNFFDEMHKNCK-LDVVAYSTMIHGACRLRD 479
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
A+ ++ + G+ PDS TY +L + + +++LK+M +G VP+ F
Sbjct: 480 RKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVF 537
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 158/335 (47%), Gaps = 17/335 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + + +T A+ L +M+ SG RPD Y LI D + KA+
Sbjct: 116 YTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAAD----VDKAVELL 171
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
++M G+E PN+V Y+ LL+ +A + V+ +F+E+ + PD+ Y G++D+
Sbjct: 172 REMCESGIE---PNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSL 228
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ G +K+ V+ +M +P+++T+N+LI+S K + + + +++
Sbjct: 229 CREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDA 288
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMK--YTPSFITYECIITMYGYCDNVSRAREIF 383
T+N++I +A + ++M + P+ +T+ +I +G C R R+ F
Sbjct: 289 VTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVI--HGLC-KTGRMRQAF 345
Query: 384 ---DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
D +++ G + T N ++ +A L + + G+ PDS TY +L +
Sbjct: 346 QVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGF 405
Query: 441 TKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
K + + LL +M ++GI P ++ L
Sbjct: 406 CKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAAL 440
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 117/252 (46%), Gaps = 12/252 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ +I + K G+ R A + M +GC + +N LI L + + KA+
Sbjct: 328 FNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLL----RVHKVKKAMELM 383
Query: 208 QKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M G+E P+ TY+IL+ + VD+ +L ++ + P++ Y ++ A
Sbjct: 384 DEMASSGLE---PDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAAL 440
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ GM+++ + M N CK D++ ++ +I + + E+ K ++ P
Sbjct: 441 CEQGMMEQARNFFDEMHKN-CKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDS 499
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T++ +I + + G AE V ++MTA + P ++ +I YG + + E+ E
Sbjct: 500 VTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIRE 559
Query: 386 LSKLGKDMKVST 397
++ KD+ + +
Sbjct: 560 MT--AKDIALDS 569
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 115/267 (43%), Gaps = 13/267 (4%)
Query: 219 NIVTYNILLRA-CAQARNVDQVNALFKEL-HESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+ V+YN +L A C Q +D L + + HE+ P +Y +M A +
Sbjct: 77 DAVSYNTVLAALCRQGGCLDAALFLLRVMAHET--RPTAVSYTTLMRALCAERRTGQAVG 134
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+L M+++ +PD++T+ LI DK ++ + + S +P + ++ ++ Y
Sbjct: 135 LLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYC 194
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
KA VF++M+ P + Y +I V +A ++ D++ + G + V
Sbjct: 195 KAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVV 254
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
T N ++ + C G EA L N GV D+ TY L + + LL+ M
Sbjct: 255 TYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEM 314
Query: 457 --EQNGIVPNKRFFLEALETFSSSLAG 481
+ + PN + TF+S + G
Sbjct: 315 IHGETMVEPN-------VVTFNSVIHG 334
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 11/203 (5%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D+ YS LI K Q A L S+MR G P+ Y L+ A + + +A
Sbjct: 394 DSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALC----EQGMMEQA 449
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+F +M + CK ++V Y+ ++ + R+ K + + L PD TY+ +++
Sbjct: 450 RNFFDEMH--KNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLIN 507
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH---SK 320
+ +G + E VL +M ++ PD+ F+ LI YG + +K+ ++ + + +
Sbjct: 508 MFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIAL 567
Query: 321 EKPTLPTFNSMII--NYGKARLQ 341
+ + T + ++ N GKA LQ
Sbjct: 568 DSKIISTIYTCLVANNEGKALLQ 590
>gi|224111544|ref|XP_002315895.1| predicted protein [Populus trichocarpa]
gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 167/358 (46%), Gaps = 11/358 (3%)
Query: 114 LLFEELGK-SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMR 172
L+FE L K S+ L FRW +KQ+ + T Y LI +GK Q + L ++M+
Sbjct: 7 LVFEALKKLSNAGALALSFFRWAEKQKGFQYSTESYHALIESLGKIKQFNVIWNLVTDMK 66
Query: 173 NSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMK--GMERCKPNIVTYNILLRAC 230
G + ALI+ +A+ + +A+ F KM+ G++ ++ N LL
Sbjct: 67 QKGLLNKETF--ALISRRYA---RARKVKEAVDAFMKMEKFGLKIESSDV---NRLLDTL 118
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
++R V++ +F ++++ DI +Y +++ +G+ + + V + MK +PD+
Sbjct: 119 CKSRQVERAQLVFDKMNKRGFVADIKSYTILLEGWGQEKNLSRLMEVYNEMKDEGFEPDV 178
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
+T+ +LI+++ K + +D ++F + KP+ + ++I G + +A F+
Sbjct: 179 VTYGILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGLGAEKRLSEALEFFEL 238
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
A + P TY ++ Y + + + + DE+ K G T + +L G
Sbjct: 239 SKASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSARTYDIILHHLIRAGK 298
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
A +F+ G P STY+++ + + + ++ K+ +M+ GI+P F
Sbjct: 299 TKIAYSVFQKMSCEGCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKGILPVMHMF 356
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 150/335 (44%), Gaps = 12/335 (3%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ ++ F M+K I + + ++L+ + K Q A +F +M G D Y L
Sbjct: 91 EAVDAFMKMEKFGLKIESSDV-NRLLDTLCKSRQVERAQLVFDKMNKRGFVADIKSYTIL 149
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
L + K L++ + + +MK E +P++VTY IL+ A ++R D LF E+
Sbjct: 150 ----LEGWGQEKNLSRLMEVYNEMKD-EGFEPDVVTYGILINAHCKSRRYDDAIELFHEM 204
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
P + Y +++ G + E K++ P+ T+N ++ +Y +
Sbjct: 205 EAKNCKPSPHIYCTLINGLGAEKRLSEALEFFELSKASGFVPEAPTYNAVVGAYCWSERM 264
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSM---IINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
D +++ + P+ T++ + +I GK ++ A VFQKM+ PS TY
Sbjct: 265 DDVQRTIDEMRKGGVGPSARTYDIILHHLIRAGKTKI---AYSVFQKMSCEGCQPSVSTY 321
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
E I+ M+ D V A +++D++ G + + ++ + C EA + F+ +
Sbjct: 322 EIIVRMFCNEDRVDMAIKVWDQMKAKGILPVMHMFSTLINSLCHESKLDEACMYFQEMLD 381
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
+G+ P + + L + K+ V +++++
Sbjct: 382 VGIRPPAQLFSNLKQNLLDEGKKDTVVVFERKLDK 416
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 186/441 (42%), Gaps = 62/441 (14%)
Query: 72 RKSEELESKELVRVLMRSFSD----KE--------------PLVRTLNKYVKVVRS---- 109
R SE+ + E++R ++ SFS+ KE P RTLN +KV
Sbjct: 129 RNSEK--ACEVMRCMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLV 186
Query: 110 EHCFLLFEELG-------------------------KSDKWLQCLEVFRWMQKQRWYIAD 144
E+ LLFEE+ ++DKWL + +R ++ D
Sbjct: 187 EYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVM-------LERGFVVD 239
Query: 145 TGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKAL 204
++ +I+ KG T A+W F + + G P+ + +I K ++ +A
Sbjct: 240 NATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLC----KRGSIKQAF 295
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI-LAPDIYTYNGVMD 263
++M G + KPN+ T+ L+ + ++ LF +L S P++ TY ++
Sbjct: 296 EMLEEMVG-KGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMIS 354
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
Y + + E +LSRMK P+ T+ LID + K F++ + + P
Sbjct: 355 GYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSP 414
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
L T+N+++ K +A + + P TY +++ + +N+ +A +F
Sbjct: 415 NLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALF 474
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+++ K+G + + ++ +C E+++ FE + +G+ P + TY + Y +
Sbjct: 475 NKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCRE 534
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
L K R+ +G P+
Sbjct: 535 GNLTLAMKFFHRLSDHGCAPD 555
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 155/362 (42%), Gaps = 12/362 (3%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
F E+G+ + +E+ M Q + +T + +I V + G A LF EM G
Sbjct: 145 FSEVGRLK---EAVEMVIEMHNQG-LVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200
Query: 176 CRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERC-KPNIVTYNILLRACAQAR 234
+PD Y ++ + K + +A + M +ER + T+ +++ +
Sbjct: 201 VQPDSISYRVMVVMYC----KIGNILEADKWLSVM--LERGFVVDNATFTLIISRFSGKG 254
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ F+ L + L P++ + +++ K G IK+ +L M KP++ T
Sbjct: 255 YTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHT 314
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSK-EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
LID K+ +K ++F L+ S+ KP + T+ +MI Y + +AE + +M
Sbjct: 315 SLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKE 374
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
P+ TY +I + N RA ++ + +S G + T NA++ C G E
Sbjct: 375 QGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQE 434
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALE 473
A + E+ G+ PD TY +L + K L +M + GI P+ + +
Sbjct: 435 AYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIA 494
Query: 474 TF 475
F
Sbjct: 495 VF 496
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 147/331 (44%), Gaps = 11/331 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM-RN 173
+ E L K Q E+ M + W + ++ LI + KKG T A LF ++ R+
Sbjct: 281 MIEGLCKRGSIKQAFEMLEEMVGKGWK-PNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRS 339
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
+P+ Y A+I+ + R+ A+ L K +G+ PN TY L+ +A
Sbjct: 340 ENHKPNVLTYTAMISGY--CREDKLNRAEMLLSRMKEQGL---VPNTNTYTTLIDGHCKA 394
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
N ++ L + +P++ TYN +++ K G ++E +L N KPD T+
Sbjct: 395 GNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTY 454
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N+L+ + K++ + +F ++ +P + ++ ++I + + ++E F++
Sbjct: 455 NILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVR 514
Query: 354 MKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
+ P+ TY +I GYC N++ A + F LS G T A++ C
Sbjct: 515 IGIIPTNKTYTSMIC--GYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKR 572
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
EA L+++ G+ P T L Y K
Sbjct: 573 DEARSLYDSMIEKGLVPCEVTRITLAYEYCK 603
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 149/323 (46%), Gaps = 11/323 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
++ ++S L+ V + A+ +F M +G RP L L++ K +
Sbjct: 129 NSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVL----LNSLAKDRLTDMV 184
Query: 204 LGYFQKMK--GMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
++KM G+E NI YN+L+ AC ++ +V++ + L E+ + PD++TYN +
Sbjct: 185 WKVYKKMARIGVE---ANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTL 241
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ Y K GM E SV RM+ KPDI+T+N LI + K + ++FK + +
Sbjct: 242 ISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDA-- 299
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P T+ ++I Y + +A + ++M A P+ +TY I+ + A +
Sbjct: 300 TPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANK 359
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ +E+S+ + T N ++ AYC G A + G+ D TYK L +
Sbjct: 360 LLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFC 419
Query: 442 KANMKELVQKLLKRMEQNGIVPN 464
K + ++LL M G P+
Sbjct: 420 KIREMDGAKELLLSMLDAGFSPS 442
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 150/343 (43%), Gaps = 15/343 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI++ KKG A+ + M G +PD YN+LI H K + +A
Sbjct: 234 DLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLI----HGFCKEGRMREA 289
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ F++++ PN VTY L+ + ++DQ L +E+ L P + TYN ++
Sbjct: 290 MRLFKEIRD---ATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILR 346
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ G I++ +L+ M + +PD +T N LI++Y K +V ++ + K
Sbjct: 347 KLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKL 406
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRARE 381
T+ ++I + K R A+ + M ++PS+ TY ++ GYC+ N +
Sbjct: 407 DQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVD--GYCNQQNEEAVLK 464
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ DE + G + S A++ +C A +F G DS Y L AY
Sbjct: 465 LPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYW 524
Query: 442 KANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQS 484
K LL M + ++ + + ++S AG S
Sbjct: 525 KLGKANAASDLLDEMYKRRLMITLKIY----RALNASYAGDNS 563
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 97/220 (44%), Gaps = 7/220 (3%)
Query: 246 LHESILAPDI--YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR 303
LH+ PDI + ++ ++ Y M +E V M N +P + +L++S K
Sbjct: 122 LHDD---PDINSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKD 178
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
+ D + +V+K + + + +N +I K+ KA+ + +M + P TY
Sbjct: 179 RLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTY 238
Query: 364 ECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHN 423
+I++Y A + D + + G + T N+++ +C G EA LF+ +
Sbjct: 239 NTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRD 298
Query: 424 MGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
TP+ TY L Y + N + +L + ME G+ P
Sbjct: 299 --ATPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYP 336
>gi|168036199|ref|XP_001770595.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678116|gb|EDQ64578.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 743
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 145/328 (44%), Gaps = 5/328 (1%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
+I V G KG + A LF +R+S + D YN +I ++ + +A ++ M
Sbjct: 401 MINVHGLKGDVKQAEELFRSLRSSVSKLDIIAYNVIINVYM----RYGMHEEAFRIYKLM 456
Query: 211 KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
+ + P+ TY+ +LR C + Q ++ L S + D N V++ +
Sbjct: 457 EEEDGLLPDSYTYHSMLRMCQKCNLQTQAEEIYWRLRNSDVELDEVMCNCVLNTCARFLP 516
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
++E+ + M C P+ ITFN++ID YGK D+ K L TF++
Sbjct: 517 LEEVHKIFQEMIDVGCIPNTITFNVMIDLYGKSGMLDRARDASK-LAQQLGVADKITFST 575
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
+I +YGK + E +M + S Y C++ YG ++ + ++ + K G
Sbjct: 576 LINSYGKKQDFRNMEATLWEMQNAGHGGSLEAYNCVLDAYGKAGHLDKLEDVIARMEKSG 635
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
M +++ N ++ Y + E + LF G PD TY + + Y A+ +
Sbjct: 636 LQMDLASYNILINIYGRHTKIAEMEALFHKMQEEGFIPDRWTYNTMIRTYGYADYPDKAV 695
Query: 451 KLLKRMEQNGIVPNKRFFLEALETFSSS 478
K M+ +GI+P++ ++ + F +
Sbjct: 696 DTFKMMQDSGIMPDRVTYVMLVAAFEKA 723
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 147/330 (44%), Gaps = 10/330 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ + ++G + Q + L +M GC PD +N LI + KA A F
Sbjct: 14 YNIMFKILGSRQQWPIIDELLGQMLGDGCVPDDYTFNTLIM----SASKADYADYATRAF 69
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
Q M KG++ P +TY++++ + V+ F + +S + + Y+ ++ Y
Sbjct: 70 QMMLEKGVQ---PTRLTYSMMMLLYQKNGKVEDAEVAFSHMLQSGIQV-VAAYSAMIAIY 125
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
+ G ++ E ++ M +++ PD + +++YG++ ++ E + ++ +
Sbjct: 126 TRCGFFEKAEKIMEDMWNHKIAPDRDNWLKQMNTYGQQGKIEEAEHIMDTMERLGMHLGV 185
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
+NSMI YGKA L KA +F+KM P +TY C+I G + A + F
Sbjct: 186 VGYNSMITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGKLRDALDYFQA 245
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ +LG S N ++ Y + + N G TPDS T + +AY +A
Sbjct: 246 MKRLGIMPASSNFNTLISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDAVVRAYERAGQ 305
Query: 446 KELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+ V ++L + + G V + + L +
Sbjct: 306 TKKVVQVLSLLREAGWVEDTESYGTLLHVY 335
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 151/343 (44%), Gaps = 7/343 (2%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
G+ K + + M++ ++ G Y+ +I GK G A+ LF +M+ +G PD
Sbjct: 161 GQQGKIEEAEHIMDTMERLGMHLGVVG-YNSMITAYGKAGLYEKALRLFEKMKEAGLEPD 219
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQV 239
Y+ +I A +A L AL YFQ MK + P +N L+ +ARNV +
Sbjct: 220 EVTYSCMIGAC----GRAGKLRDALDYFQAMKRL-GIMPASSNFNTLISLYGKARNVVGI 274
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
+ ++ PD T + V+ AY + G K++ VLS ++ D ++ L+
Sbjct: 275 VRVLADMKNFGCTPDSQTLDAVVRAYERAGQTKKVVQVLSLLREAGWVEDTESYGTLLHV 334
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
Y K + VF ++ + P S+I A + A VF+ M + PS
Sbjct: 335 YLKCNLQKEALSVFSAMRKAGMAPKEYMCRSLICACKDAGMFEDATNVFRDMQSAGVVPS 394
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
T +I ++G +V +A E+F L + + N ++ Y G+ EA +++
Sbjct: 395 LETSCTMINVHGLKGDVKQAEELFRSLRSSVSKLDIIAYNVIINVYMRYGMHEEAFRIYK 454
Query: 420 -NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
G+ PDS TY + + K N++ +++ R+ + +
Sbjct: 455 LMEEEDGLLPDSYTYHSMLRMCQKCNLQTQAEEIYWRLRNSDV 497
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 103/218 (47%), Gaps = 16/218 (7%)
Query: 167 LFSEMRNSGCRPDPSVYNALI-----TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIV 221
+F EM + GC P+ +N +I + L A LA+ LG K +
Sbjct: 523 IFQEMIDVGCIPNTITFNVMIDLYGKSGMLDRARDASKLAQQLGVADK-----------I 571
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
T++ L+ + + ++ + A E+ + + YN V+DAYGK G + ++E V++RM
Sbjct: 572 TFSTLINSYGKKQDFRNMEATLWEMQNAGHGGSLEAYNCVLDAYGKAGHLDKLEDVIARM 631
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
+ + + D+ ++N+LI+ YG+ +ME +F + P T+N+MI YG A
Sbjct: 632 EKSGLQMDLASYNILINIYGRHTKIAEMEALFHKMQEEGFIPDRWTYNTMIRTYGYADYP 691
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
KA F+ M P +TY ++ + N+ A
Sbjct: 692 DKAVDTFKMMQDSGIMPDRVTYVMLVAAFEKAGNLLEA 729
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 107/254 (42%), Gaps = 1/254 (0%)
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
+ + N+ +YNI+ + + ++ L ++ PD YT+N ++ + K
Sbjct: 6 KTRGNVYSYNIMFKILGSRQQWPIIDELLGQMLGDGCVPDDYTFNTLIMSASKADYADYA 65
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
M +P +T+++++ Y K + E F ++ S + + +++MI
Sbjct: 66 TRAFQMMLEKGVQPTRLTYSMMMLLYQKNGKVEDAEVAFSHMLQSGIQ-VVAAYSAMIAI 124
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMK 394
Y + KAE + + M K P + + YG + A I D + +LG +
Sbjct: 125 YTRCGFFEKAEKIMEDMWNHKIAPDRDNWLKQMNTYGQQGKIEEAEHIMDTMERLGMHLG 184
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
V N+M+ AY GL +A LFE G+ PD TY + A +A +
Sbjct: 185 VVGYNSMITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGKLRDALDYFQ 244
Query: 455 RMEQNGIVPNKRFF 468
M++ GI+P F
Sbjct: 245 AMKRLGIMPASSNF 258
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 131/323 (40%), Gaps = 18/323 (5%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS ++ + K G+ A FS M SG + + Y+A+I ++TR G+F
Sbjct: 84 YSMMMLLYQKNGKVEDAEVAFSHMLQSGIQV-VAAYSAMIA--IYTR---------CGFF 131
Query: 208 QK----MKGM--ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+K M+ M + P+ + + Q +++ + + + + YN +
Sbjct: 132 EKAEKIMEDMWNHKIAPDRDNWLKQMNTYGQQGKIEEAEHIMDTMERLGMHLGVVGYNSM 191
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ AYGK G+ ++ + +MK +PD +T++ +I + G+ F+++
Sbjct: 192 ITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGKLRDALDYFQAMKRLGI 251
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
P FN++I YGKAR V M TP T + ++ Y + +
Sbjct: 252 MPASSNFNTLISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDAVVRAYERAGQTKKVVQ 311
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ L + G + +L Y L EA +F G+ P + L A
Sbjct: 312 VLSLLREAGWVEDTESYGTLLHVYLKCNLQKEALSVFSAMRKAGMAPKEYMCRSLICACK 371
Query: 442 KANMKELVQKLLKRMEQNGIVPN 464
A M E + + M+ G+VP+
Sbjct: 372 DAGMFEDATNVFRDMQSAGVVPS 394
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 121/287 (42%), Gaps = 9/287 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS +IA+ + G A + +M N PD + ++T + + +A
Sbjct: 118 YSAMIAIYTRCGFFEKAEKIMEDMWNHKIAPDRDNW----LKQMNTYGQQGKIEEAE--- 170
Query: 208 QKMKGMERCKPN--IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
M MER + +V YN ++ A +A ++ LF+++ E+ L PD TY+ ++ A
Sbjct: 171 HIMDTMERLGMHLGVVGYNSMITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSCMIGAC 230
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
G+ G +++ MK P FN LI YGK + + +V + + P
Sbjct: 231 GRAGKLRDALDYFQAMKRLGIMPASSNFNTLISLYGKARNVVGIVRVLADMKNFGCTPDS 290
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T ++++ Y +A K V + + +Y ++ +Y C+ A +F
Sbjct: 291 QTLDAVVRAYERAGQTKKVVQVLSLLREAGWVEDTESYGTLLHVYLKCNLQKEALSVFSA 350
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
+ K G K +++ A G+ +A +F + + GV P T
Sbjct: 351 MRKAGMAPKEYMCRSLICACKDAGMFEDATNVFRDMQSAGVVPSLET 397
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 82/180 (45%), Gaps = 1/180 (0%)
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
++ + + ++ ++N++ G RQ + ++++ ++ P TFN++I++ KA
Sbjct: 3 ENGKTRGNVYSYNIMFKILGSRQQWPIIDELLGQMLGDGCVPDDYTFNTLIMSASKADYA 62
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
A FQ M P+ +TY ++ +Y V A F + + G + V+ +AM
Sbjct: 63 DYATRAFQMMLEKGVQPTRLTYSMMMLLYQKNGKVEDAEVAFSHMLQSGIQV-VAAYSAM 121
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ Y G +A+ + E+ N + PD + Y + E + ++ ME+ G+
Sbjct: 122 IAIYTRCGFFEKAEKIMEDMWNHKIAPDRDNWLKQMNTYGQQGKIEEAEHIMDTMERLGM 181
>gi|326488077|dbj|BAJ89877.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 395
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 167/379 (44%), Gaps = 31/379 (8%)
Query: 95 PLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAV 154
P++R L K+ + + + FE LG S K TG Y+ LI
Sbjct: 39 PIIRHLCKHKEALAAHELVKKFENLGVSLK--------------------TGSYNALICG 78
Query: 155 MGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KG 212
+ + +A LFSEM+ GC PD Y+ ++ A K+ + L ++M KG
Sbjct: 79 LVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDA----MGKSMRIEDMLKIQEEMHNKG 134
Query: 213 MERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIK 272
K VTYN ++ +++ +D+ L+ +L +P TY ++D K+G I+
Sbjct: 135 Y---KSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIE 191
Query: 273 EMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
+ E++ M C+P+ +N+L++ Y +K+ ++F+S++ P + ++ +I
Sbjct: 192 DAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVI 251
Query: 333 INY-GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGK 391
RL Y F+++T M P ITY +I G + A +++++ K G
Sbjct: 252 DTLCADGRLNDGLSY-FKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGI 310
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
+ T N+++ G EA ++E G P+ TY L + Y+ + E
Sbjct: 311 APNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFA 370
Query: 452 LLKRMEQNGIVPNKRFFLE 470
RM G PN +++
Sbjct: 371 AYGRMIVGGCRPNSSTYMQ 389
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 88/222 (39%), Gaps = 35/222 (15%)
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+YN ++ +I E + S MK C PD T++L++D+ GK + M ++ +
Sbjct: 71 SYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKI-QEE 129
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
MH+K Y +++TY II+ +
Sbjct: 130 MHNK----------------------------------GYKSTYVTYNTIISGLVKSKML 155
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
A ++ +L G T +L+ +G +A+ LF+ G P+ + Y +L
Sbjct: 156 DEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNIL 215
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
Y A E V +L + M + G+ P+ + + ++T +
Sbjct: 216 LNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCAD 257
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 158/339 (46%), Gaps = 12/339 (3%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
L++FR + Y D YS LI +G A L EM + PDPS + +L+
Sbjct: 415 LDIFRDLGAA-GYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLV- 472
Query: 189 AHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
H K AL +F M G+ P+I T N+++ A + V++ L E+
Sbjct: 473 ---HGFCKMGLWVNALEFFNMMLEGGI---LPSIATCNVIIDAHCREGRVEEALNLMNEM 526
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
+ P+++TYN V++ K + + M P ++ ++ LID + K+
Sbjct: 527 QTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNS 586
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMI-INYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
K ++ ++ P + + +I I ++R+ +A +F+KMT TP I+Y
Sbjct: 587 QKALMLYARMLKIGVTPDMVAYTILINILCHRSRM-CEAYNLFKKMTENGMTPDKISYTS 645
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
+I + ++ +A +F+E+ + G V T ++++ YC AD+L + G
Sbjct: 646 VIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKG 705
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+TPD TY +L A+ + + ++L M++NG++P+
Sbjct: 706 ITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPD 744
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 136/303 (44%), Gaps = 9/303 (2%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDK-AKALAKALGYFQKMKGMERC--KPNIVTY 223
LF EM+++G P P+V+ I + + + +A + ++ MER P +VTY
Sbjct: 236 LFEEMKSTG--PPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTY 293
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
+ + + V+ + L + ++Y YN ++ K G + E VL MKS
Sbjct: 294 STYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKS 353
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
PD+ T+++LI + K+ +K + + + +S +P+L +++S+ K RL
Sbjct: 354 CGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDI 413
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAM 401
+ +F+ + A Y Y +I G+C ++ A ++ +E+ + S ++
Sbjct: 414 SLDIFRDLGAAGYKYDQTAYSILIK--GFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESL 471
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+ +C GL A F G+ P +T ++ A+ + E L+ M+ GI
Sbjct: 472 VHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGI 531
Query: 462 VPN 464
PN
Sbjct: 532 FPN 534
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 128/284 (45%), Gaps = 12/284 (4%)
Query: 159 GQTRLAMWL-----FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGM 213
G ++ +W+ F+ M G P + N +I AH + + +AL +M+
Sbjct: 474 GFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHC----REGRVEEALNLMNEMQ-T 528
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
+ PN+ TYN ++ + R ++ LF + + + P + Y+ ++D + K ++
Sbjct: 529 QGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQK 588
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
+ +RM PD++ + +LI+ R + +FK + + P ++ S+I
Sbjct: 589 ALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIA 648
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM 393
+ + KA +F +M + P+ +TY ++ Y + + A + DE+ + G
Sbjct: 649 GFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITP 708
Query: 394 KVSTLNAMLEAYCMNG-LPTEADLLFENSHNMGVTPDSSTYKLL 436
V T N ++ A+ G L ++L E N GV PD TY +L
Sbjct: 709 DVVTYNVLIAAHRRRGNLDKALEMLNEMKEN-GVLPDHMTYMML 751
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 138/331 (41%), Gaps = 11/331 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I + KKG+ A+ + EM++ G PD Y+ LI H K + K L
Sbjct: 328 YNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILI----HGFCKQGDVEKGLYLI 383
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++MK +P++V+Y+ L + R D +F++L + D Y+ ++ +
Sbjct: 384 EEMK-YSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCM 442
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + ++ M N PD F L+ + K + + F ++ P++ T
Sbjct: 443 QGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIAT 502
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECIITMYGYCDNVSRAREIFD 384
N +I + + +G+ E M M+ P+ TY +I RA E+F
Sbjct: 503 CNVIIDAHCR---EGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFP 559
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ K V + +++ + +A +L+ +GVTPD Y +L +
Sbjct: 560 LMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRS 619
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
L K+M +NG+ P+K + + F
Sbjct: 620 RMCEAYNLFKKMTENGMTPDKISYTSVIAGF 650
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 121/287 (42%), Gaps = 23/287 (8%)
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM------IKEMESV 277
N LL+ A+A + + +LF+E+ + P+++TY +M+ Y K ++ +
Sbjct: 218 NFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEI 277
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
L M+ N P ++T++ I + + +SL+ + + +N++I K
Sbjct: 278 LEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCK 337
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKV 395
+A V ++M + +P TY I ++G+C +V + + +E+ + +
Sbjct: 338 KGELDEALKVLEEMKSCGISPDVYTYS--ILIHGFCKQGDVEKGLYLIEEMKYSNMEPSL 395
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+ +++ C L + +F + G D + Y +L K + + KL++
Sbjct: 396 VSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEE 455
Query: 456 MEQNGIVPNKRFF-------------LEALETFSSSLAGSQSGSAKT 489
M +N + P+ F + ALE F+ L G S T
Sbjct: 456 MVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIAT 502
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/290 (19%), Positives = 120/290 (41%), Gaps = 53/290 (18%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
+++ +++L++ A ++ +F + ++ L + N ++ + + + S+
Sbjct: 178 SVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLF 237
Query: 279 SRMKSNQCKPDIITFNLLIDSYGK----------RQAFDKMEQVFKSLMHSKEKPTLPTF 328
MKS P++ T+ ++++ Y K RQA + +E++ + + E PT+ T+
Sbjct: 238 EEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMER----NGESPTVVTY 293
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
++ I YG R+ G E +A+ + S I+ ++ +Y Y
Sbjct: 294 STYI--YGLCRV-GYVE------SALDFVRSLISANGLVNVYCY---------------- 328
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
NA++ C G EA + E + G++PD TY +L + K E
Sbjct: 329 ----------NAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEK 378
Query: 449 VQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTRSLSTA 498
L++ M+ + + P+ L + + L + D+ R L A
Sbjct: 379 GLYLIEEMKYSNMEPS----LVSYSSLFHGLCKKRLSDISLDIFRDLGAA 424
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 140/327 (42%), Gaps = 5/327 (1%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
IY+ LI + G A +FS M + G + +Y +I K
Sbjct: 144 IYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFE----L 199
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+QKMK + PN+ TYN L+ + + +F E+ + +A + TYN ++
Sbjct: 200 YQKMK-LVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLC 258
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+ G + + E +L RMK P TFN+L+D DK + L PTL
Sbjct: 259 RKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLV 318
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T+N +I + K + ++M +PS +TY ++ + D++ +A E+F +
Sbjct: 319 TYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLM 378
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
++G T ++ C+ G EA L+++ M + P+ Y + Y K
Sbjct: 379 KRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNS 438
Query: 447 ELVQKLLKRMEQNGIVPNKRFFLEALE 473
K L+ M +NG+ PN ++ ++
Sbjct: 439 YKALKFLEEMVKNGVTPNVASYISTIQ 465
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 133/285 (46%), Gaps = 6/285 (2%)
Query: 196 KAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
K+ L + G+F + G R + ++ ++ I ++A + NV + L ++ ++P++
Sbjct: 85 KSGNLDRTWGFFTEYLG--RTQFDVYSFWITIKAFCENGNVSKGFELLAQMETMGVSPNV 142
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
+ Y +++A +NG I + + + SRM + + ++I+ + K+ ++++
Sbjct: 143 FIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQK 202
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC-- 373
+ P L T+NS+I Y + A VF +++ + +TY +I G C
Sbjct: 203 MKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIG--GLCRK 260
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
VS+A + + + + + T N +++ C G +A E +G+ P TY
Sbjct: 261 GQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTY 320
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+L ++K +V +L++ ME GI P+K + + TF S
Sbjct: 321 NILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRS 365
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 163/370 (44%), Gaps = 16/370 (4%)
Query: 112 CFLLFEELGKSD-KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSE 170
C F ++GK D W + F ++ Q + D ++ +I V+ K + A+ LF E
Sbjct: 278 CIDCFGKVGKVDMAW----KFFHELKSQ-GLVPDDVTFTSMIGVLCKAERVDEAVELFEE 332
Query: 171 MRNSGCRPDPSVYNALITAH--LHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLR 228
+ ++ P YN +I + + ++A +L + QK KG C P+++ YN +L
Sbjct: 333 LDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLER----QKRKG---CIPSVIAYNCILT 385
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
+ V++ + + + AP++ +YN ++D K G ++ V MK P
Sbjct: 386 CLGRKGKVEEALRILEAMKMDA-APNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFP 444
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
+IIT N++ID K Q D+ +F L H P TF S+I G+ A ++
Sbjct: 445 NIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLY 504
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
+KM TP+ + Y +I + C +I+ E+ G + LN ++
Sbjct: 505 EKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKA 564
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G + LFE G+TPD +Y +L K + KL M++ G+ + R +
Sbjct: 565 GEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAY 624
Query: 469 LEALETFSSS 478
++ F S
Sbjct: 625 NIVIDGFCKS 634
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 148/326 (45%), Gaps = 8/326 (2%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K + D YS LI + K G ++ LF EM+ G D YN +I K
Sbjct: 578 KAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFC----K 633
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+ + KA ++MK + +P +VTY ++ A+ +D+ LF+E + ++
Sbjct: 634 SGKVNKAYQLLEEMK-TKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVV 692
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
Y+ ++D +GK G I E +L + P+ T+N L+D+ K + D+ F+++
Sbjct: 693 VYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNM 752
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+ K P T++ M+ K R KA +Q+M P+ ITY +I+ NV
Sbjct: 753 KNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNV 812
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
A+++F+ G + NAM+E +A +LFE + G S T +L
Sbjct: 813 LEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVL 872
Query: 437 YKAYTKANMKE---LVQKLLKRMEQN 459
A KA+ E +V +L+ M ++
Sbjct: 873 LDALHKADCLEQAAIVGAVLREMAKS 898
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 156/352 (44%), Gaps = 8/352 (2%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ + L K+ + + +F + + D+ + LI +G+ G+ A L+ +M +
Sbjct: 451 IMIDRLCKAQRLDEACSIFLGLD-HKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLD 509
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMER-CKPNIVTYNILLRACAQ 232
SG P+ VY +LI R+ K K G+ + M R C P+++ N + +
Sbjct: 510 SGQTPNAVVYTSLI------RNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFK 563
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
A +++ ALF+E+ L PD+ +Y+ ++ K G K+ + MK D
Sbjct: 564 AGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRA 623
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+N++ID + K +K Q+ + + +PT+ T+ S+I K +A +F++
Sbjct: 624 YNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 683
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
+ + + Y +I +G + A I +EL + G T N +L+A
Sbjct: 684 SKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEID 743
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA + F+N N+ P+ TY ++ K + M++ G+ PN
Sbjct: 744 EALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPN 795
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 143/332 (43%), Gaps = 5/332 (1%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y+ LI K G+ ++ EM + GC PD L+ ++ KA + K
Sbjct: 518 VYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDL----MLLNNYMDCVFKAGEIEKGRAL 573
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
F+++K + P++ +Y+IL+ + LF E+ E L D YN V+D +
Sbjct: 574 FEEIKA-QGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFC 632
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
K+G + + +L MK+ +P ++T+ +ID K D+ +F+ +
Sbjct: 633 KSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVV 692
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
++S+I +GK +A + +++ TP+ T+ C++ + + A F +
Sbjct: 693 VYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNM 752
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
L T + M+ C +A + ++ G+ P++ TY + +
Sbjct: 753 KNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNV 812
Query: 447 ELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ L +R + +G +P+ + +E S++
Sbjct: 813 LEAKDLFERFKSSGGIPDSACYNAMIEGLSNA 844
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 157/388 (40%), Gaps = 30/388 (7%)
Query: 76 ELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWM 135
EL+S+ LV D + K R + LFEEL S+K + C+
Sbjct: 297 ELKSQGLV-------PDDVTFTSMIGVLCKAERVDEAVELFEEL-DSNKSVPCVYA---- 344
Query: 136 QKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRD 195
Y+ +I G G+ A L + GC P YN ++T L +
Sbjct: 345 ------------YNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTC-LGRKG 391
Query: 196 KAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
K + +AL + MK PN+ +YNIL+ +A ++ + + E+ L P+I
Sbjct: 392 KVE---EALRILEAMK--MDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNI 446
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
T N ++D K + E S+ + C PD +TF LID G+ + +++
Sbjct: 447 ITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEK 506
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
++ S + P + S+I N+ K + ++++M +P + +
Sbjct: 507 MLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGE 566
Query: 376 VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKL 435
+ + R +F+E+ G V + + ++ G + LF G+ D+ Y +
Sbjct: 567 IEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNI 626
Query: 436 LYKAYTKANMKELVQKLLKRMEQNGIVP 463
+ + K+ +LL+ M+ G+ P
Sbjct: 627 VIDGFCKSGKVNKAYQLLEEMKTKGLQP 654
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 128/295 (43%), Gaps = 8/295 (2%)
Query: 150 KLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQK 209
+++A K + R A + MR RP S Y LI A L +A + L Q+
Sbjct: 172 EMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGA-LSAAHEADPMLTLLRQMQE 230
Query: 210 MKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG 269
+ G E + + L+ A+ VD +L E+ + D+ YN +D +GK G
Sbjct: 231 I-GYE---VTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVG 286
Query: 270 MIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFN 329
+ +KS PD +TF +I K + D+ ++F+ L +K P + +N
Sbjct: 287 KVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYN 346
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
+MI+ YG +A + ++ PS I Y CI+T G V A I + + K+
Sbjct: 347 TMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM-KM 405
Query: 390 GKDMKVSTLNAMLEAYCMNGLPTEADLLFENS-HNMGVTPDSSTYKLLYKAYTKA 443
+++ N +++ C G EA L ++S G+ P+ T ++ KA
Sbjct: 406 DAAPNLTSYNILIDMLCKAG-ELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKA 459
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 22/165 (13%)
Query: 100 LNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKG 159
++ + KV R + +L+ EEL Q+ +T ++ L+ + K
Sbjct: 698 IDGFGKVGRIDEAYLILEEL-----------------MQKGLTPNTYTWNCLLDALVKAE 740
Query: 160 QTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPN 219
+ A+ F M+N C P+ Y+ ++ K + KA ++Q+M+ + KPN
Sbjct: 741 EIDEALVCFQNMKNLKCPPNEVTYSIMVNGLC----KVRKFNKAFVFWQEMQK-QGLKPN 795
Query: 220 IVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
+TY ++ A+ NV + LF+ S PD YN +++
Sbjct: 796 TITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEG 840
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 144/326 (44%), Gaps = 13/326 (3%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH--TRDKAKALAKAL 204
+Y ++ + G R ++ + M GC D N ++ A D+A L + L
Sbjct: 148 MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKL 207
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
+F C+ +IV+YN +L+ A+ V L E+ AP+I T+N ++
Sbjct: 208 AFFG-------CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+NG+ + + VL++M + C PDI + +ID K + ++ + KP
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN 320
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREI 382
+ +N+++ A +AE + +M +T+ ++ +C N V R E+
Sbjct: 321 VVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF--FCQNGLVDRVIEL 378
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+++ G V T ++ +C GL EA +L ++ + G P++ +Y ++ K
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFF 468
A ++L+ +M Q G PN F
Sbjct: 439 AGRWVDAEELMSQMIQQGCPPNPVTF 464
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 154/366 (42%), Gaps = 52/366 (14%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DTG + ++ + ++G A+ L ++ GC D YNA++ K +AK
Sbjct: 180 DTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVL--------KGLCMAKR 231
Query: 204 LGYFQK-MKGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
G ++ M M R C PNIVT+N L+ + ++V+ + ++ E PDI Y
Sbjct: 232 WGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYAT 291
Query: 261 VMDAYGKNGMI-----------------------------------KEMESVLSRMKSNQ 285
++D K G + KE E +LS M
Sbjct: 292 IIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
C D +TFN+L+D + + D++ ++ + ++ P + T+ ++I + K L +A
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSR---AREIFDELSKLGKDMKVSTLNAML 402
+ + M++ P+ ++Y I + G C + R A E+ ++ + G T N ++
Sbjct: 412 MLLKSMSSCGCKPNTVSYT--IVLKGLC-SAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
C GL +A L + G +PD +Y + KA E +LL M GI
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS 528
Query: 463 PNKRFF 468
PN +
Sbjct: 529 PNTIIY 534
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 172/411 (41%), Gaps = 27/411 (6%)
Query: 68 SKRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQ 127
+KR EEL E+VRV D P + T N + + LFE +
Sbjct: 229 AKRWGDVEEL-MDEMVRV------DCAPNIVTFNTLIGYLCRNG---LFERVH------- 271
Query: 128 CLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
EV M + D +Y+ +I + K+G +A + + M + G +P+ YN ++
Sbjct: 272 --EVLAQM-SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVL 328
Query: 188 TAHLHTRDKAKALAKALG-YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
L + ++ K + L FQK C + VT+NIL+ Q VD+V L +++
Sbjct: 329 KG-LCSAERWKEAEELLSEMFQK-----DCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 382
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
PD+ TY V++ + K G+I E +L M S CKP+ +++ +++ +
Sbjct: 383 LSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRW 442
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
E++ ++ P TFN++I K L +A + ++M +P I+Y +
Sbjct: 443 VDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTV 502
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I G A E+ + + G +++ A G + +F+N + +
Sbjct: 503 IDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTI 562
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
D+ Y + + K + M NG +PN+ + ++ +S
Sbjct: 563 RSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLAS 613
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 125/299 (41%), Gaps = 9/299 (3%)
Query: 180 PSVYNAL-ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
P+ Y + L TR + +A AL +M + C P Y+++L A ++
Sbjct: 109 PNAYTFFPVVRGLCTRGR---IADALEVLDEMS-FKGCAPIPPMYHVILEAACRSGGFRN 164
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+ + +H D N V++A + G + E +L ++ C+ DI+++N ++
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
+ + +E++ ++ P + TFN++I + L + V +M+ TP
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284
Query: 359 SFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
Y II G C ++ A EI + + G V N +L+ C EA+
Sbjct: 285 DIRMYATIID--GICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEE 342
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
L D T+ +L + + + + V +LL++M +G +P+ + + F
Sbjct: 343 LLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 94/230 (40%), Gaps = 4/230 (1%)
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
+ P+ YT+ V+ G I + VL M C P +++++++ + F
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 311 QVFKSLMHSKEKPTLPTFN-SMIIN-YGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+V ++ MH+K TL T N ++++N + +A + +K+ ++Y ++
Sbjct: 167 RVLEA-MHAK-GCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
E+ DE+ ++ + T N ++ C NGL + G TP
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
D Y + K E+ ++L RM G+ PN + L+ S+
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSA 334
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 163/366 (44%), Gaps = 12/366 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + LG++ +W + E+ + M R D Y+ L + K G+ A+ + M
Sbjct: 261 LMQGLGRTGRWREASEMLKDMT-ARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQK 319
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQ 232
G P YN ++ L D+ + A G + M KG KP+ VTYN LL+
Sbjct: 320 GEEPGTLTYNVVVNG-LCKEDR---MDDAFGVVEMMVKKGK---KPDAVTYNTLLKGLCG 372
Query: 233 ARNVDQVNALFKEL--HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
A + + L+K L + + PD++T N ++ K G + + + S M + +I
Sbjct: 373 AGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNI 432
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
+T+N LI+ Y + + +++K + S P T++ MI K ++ A +F K
Sbjct: 433 VTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCK 492
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M P+ I Y ++T D++ +AR +F E+ + ++ V + N +++ G
Sbjct: 493 MKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGD 552
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
A L M + PD+ T+ +L ++K M + L ++M G VP F
Sbjct: 553 VKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDS 612
Query: 471 ALETFS 476
L+ +
Sbjct: 613 LLKGYG 618
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 137/317 (43%), Gaps = 18/317 (5%)
Query: 157 KKGQTRLAMWLFSEM-RNSGCR-PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME 214
+ GQ AM LFS+M RN C PD YN L+ KAK LA+A F+ MK
Sbjct: 124 RSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFC----KAKRLAEARVLFEAMKKGG 179
Query: 215 RCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEM 274
C+PN+VTY++L+ ++ V + L +E+ L D++ Y+ ++ A+ G I+
Sbjct: 180 DCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETG 239
Query: 275 ESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIIN 334
+ M + P+++T++ L+ G+ + + ++ K + +P + + +
Sbjct: 240 RELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADG 299
Query: 335 YGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKD 392
K G A V M P +TY ++ G C D + A + + + K GK
Sbjct: 300 LCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVN--GLCKEDRMDDAFGVVEMMVKKGKK 357
Query: 393 MKVSTLNAMLEAYCMNGLPTEAD-----LLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
T N +L+ C G EA LL E H V PD T L + K
Sbjct: 358 PDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFH---VKPDVFTCNNLIQGLCKEGRVH 414
Query: 448 LVQKLLKRMEQNGIVPN 464
++ M + G+ N
Sbjct: 415 DAARIHSSMVEMGLQGN 431
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 144/345 (41%), Gaps = 14/345 (4%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L K D+ V M K + D Y+ L+ + G+ AM L+ + +
Sbjct: 335 LCKEDRMDDAFGVVEMMVK-KGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHV 393
Query: 179 DPSVY--NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
P V+ N LI L + A+ +M G++ NIVTYN L+ AR +
Sbjct: 394 KPDVFTCNNLIQG-LCKEGRVHDAARIHSSMVEM-GLQ---GNIVTYNFLIEGYLAARKL 448
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
+ L+K ES +P+ TY+ +++ K M+ + +MK + +P +I +N L
Sbjct: 449 IEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNAL 508
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
+ S + + ++ +F+ + + + +FN +I KA A+ + +M M
Sbjct: 509 MTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDL 568
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
P +T+ +I + + A +++++ G V +++L+ Y GL E +
Sbjct: 569 VPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGY---GLKGETEK 625
Query: 417 LFENSHNMG---VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
+ H M V DS + + V+K+L + Q
Sbjct: 626 IISLLHQMADKDVVLDSKLTSTILACLCHMSRNLDVEKILPKFSQ 670
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 97/214 (45%), Gaps = 3/214 (1%)
Query: 254 DIYTYNGVMDAYGKNGMIKEMESVLSRMKSN-QC-KPDIITFNLLIDSYGKRQAFDKMEQ 311
++Y N V+ + ++G + S+ S+MK N C PD +T+N L++ + K + +
Sbjct: 111 NVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARV 170
Query: 312 VFKSLMHSKE-KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMY 370
+F+++ + +P L T++ +I Y K+ G+ + ++M Y +I+ +
Sbjct: 171 LFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAF 230
Query: 371 GYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
++ RE+FDE+ + V T + +++ G EA + ++ GV PD
Sbjct: 231 CGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDV 290
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y +L K K+L M Q G P
Sbjct: 291 VAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPG 324
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 2/140 (1%)
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P+ P +++I N KAR V+ KM + P F + + + + S A +
Sbjct: 40 PSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSV 99
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM--GVTPDSSTYKLLYKAY 440
++K G + V LN +L+ +C +G +A LF V PD TY L +
Sbjct: 100 LSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGF 159
Query: 441 TKANMKELVQKLLKRMEQNG 460
KA + L + M++ G
Sbjct: 160 CKAKRLAEARVLFEAMKKGG 179
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 145/328 (44%), Gaps = 42/328 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ L+ K G A+ F+ M + GC+PD ++ +I+ + K + +A +F
Sbjct: 1216 FTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVIS----SLSKKRRAIEAQSFF 1271
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+K +R +P++V Y L+ +A N+ + +F E+ + + P++YTY+ V+DA +
Sbjct: 1272 DSLK--DRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDALCR 1329
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+G I V S M C P+ ITFN L+ + K +K+ Q
Sbjct: 1330 SGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQ---------------- 1373
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
V+ +M + P ITY +I + DN+ A +I + +
Sbjct: 1374 -------------------VYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVK 1414
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
K G ++ S+ N + G A +F ++ P++ TY +L + + +
Sbjct: 1415 K-GCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTD 1473
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETF 475
+V KL K M++N I PN + + TF
Sbjct: 1474 MVLKLRKEMDENEIEPNANTYRVLISTF 1501
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 114/258 (44%), Gaps = 1/258 (0%)
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
+ L +F +E + Y ++ + R D L + + + T+ +
Sbjct: 1160 QTLAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFTIL 1219
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ Y K G+ E +RM+ CKPD I F+++I S K++ + + F SL +
Sbjct: 1220 VRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSL-KDRF 1278
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
+P + + S++ + +A +AE VF +M P+ TY +I ++RA +
Sbjct: 1279 EPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRAHD 1338
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+F E+ +G D T N ++ + G + ++ +G PD+ TY L +++
Sbjct: 1339 VFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHC 1398
Query: 442 KANMKELVQKLLKRMEQN 459
+ + E K+L +++
Sbjct: 1399 RDDNLEEAVKILNSVKKG 1416
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 116/244 (47%), Gaps = 7/244 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS +I + + GQ A +FSEM + GC P+ +N L+ H+ KA K L +
Sbjct: 1320 YSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHV----KAGRTEKVLQVY 1375
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+MK + C P+ +TYN L+ + + N+++ + + + + ++N + K
Sbjct: 1376 NQMKRLG-CPPDAITYNFLIESHCRDDNLEEAVKILNSVKKGC-NLNASSFNPIFGCISK 1433
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + + ++MK +C+P+ +T+N+L+ + +++ D + ++ K + ++ +P T
Sbjct: 1434 LGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANT 1493
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMK-YTPSFITYECIITMYGYCDNVSRAREIFDEL 386
+ +I + A F++M K PS YE ++ + + E+ +++
Sbjct: 1494 YRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKM 1553
Query: 387 SKLG 390
G
Sbjct: 1554 VNRG 1557
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 151/375 (40%), Gaps = 51/375 (13%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI K+G R A +F+E+R G RP +N LI +R+ + F
Sbjct: 226 YNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEG-------F 278
Query: 208 QKMKGME--RCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL-------------- 251
+ K ME R P++ TY++L+ + +D LF E+ + L
Sbjct: 279 RLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQ 338
Query: 252 ---------------------APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
PD+ YN +++ K G + + ++ MK KPD
Sbjct: 339 YRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDK 398
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
IT+ LID Y K + ++ K + F ++I + + AE ++
Sbjct: 399 ITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLRE 458
Query: 351 MTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
M P TY +I GYC NV ++ E+ G V T N ++ C
Sbjct: 459 MVEAGMKPDDATYTMVID--GYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQ 516
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G A++L E N+GVTPD TY +L + + K E LLK + G++ + ++
Sbjct: 517 GQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAE---DLLKLRNEKGLIVDYAYY 573
Query: 469 LEALETFSSSLAGSQ 483
+ ++ SL Q
Sbjct: 574 TSLVSEYNKSLKDRQ 588
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 151/341 (44%), Gaps = 15/341 (4%)
Query: 126 LQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLF-SEMRNSGCRPDPSVYN 184
+QC + R Q + + K+I + + +W F SE+ G P YN
Sbjct: 173 IQCFRLVRNSNFQIPFHGCGYLLDKMI-----NSNSPVTIWTFYSEILEYGFPPKVQYYN 227
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
LI K ++ A F +++ +P V++N L+ ++RN+D+ L K
Sbjct: 228 ILINKFC----KEGSIRDAKLIFNEIRK-RGLRPTTVSFNTLINGLCKSRNLDEGFRLKK 282
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
+ E+ + PD++TY+ ++ K G + E + M+ +P+ ITF LID + +
Sbjct: 283 TMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSR 342
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
D + ++ KP L +N+++ K KA + +M + P ITY
Sbjct: 343 RMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYT 402
Query: 365 CIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
+I GYC ++ A EI +++ G + A++ +C +G +A+
Sbjct: 403 TLID--GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMV 460
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
G+ PD +TY ++ Y K ++ KLLK M+ NG P
Sbjct: 461 EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKP 501
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 147/334 (44%), Gaps = 19/334 (5%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L KS + + + M++ R Y D YS LI + K+G+ +A LF EM+
Sbjct: 264 LINGLCKSRNLDEGFRLKKTMEENRIY-PDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQR 322
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G RP+ + ALI +R + A+ + +M M KP++V YN LL +
Sbjct: 323 GLRPNGITFTALIDGQYRSR----RMDSAMNTYHQMLTMG-VKPDLVMYNTLLNGLCKVG 377
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+V++ L E+ + PD TY ++D Y K G ++ + M D + F
Sbjct: 378 DVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFT 437
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
LI + + E+ + ++ + KP T+ +I Y K +G + F+ + M
Sbjct: 438 ALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCK---KGNVKMGFKLLKEM 494
Query: 355 K---YTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
+ + P ITY + M G C + A + + + LG T N +LE +C NG
Sbjct: 495 QINGHKPGVITYN--VLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG 552
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+A+ L + + G+ D + Y L Y K+
Sbjct: 553 ---KAEDLLKLRNEKGLIVDYAYYTSLVSEYNKS 583
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 114/258 (44%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
P + YNIL+ + ++ +F E+ + L P ++N +++ K+ + E +
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
M+ N+ PD+ T+++LI K D EQ+F + +P TF ++I +
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYR 340
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
+R A + +M M P + Y ++ +V++AR++ DE+ +G T
Sbjct: 341 SRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKIT 400
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
+++ YC G A + + + GV D+ + L + + ++ L+ M
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMV 460
Query: 458 QNGIVPNKRFFLEALETF 475
+ G+ P+ + ++ +
Sbjct: 461 EAGMKPDDATYTMVIDGY 478
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 103/234 (44%)
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
+ E+ E P + YN +++ + K G I++ + + + ++ +P ++FN LI+
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFI 361
K + D+ ++ K++ ++ P + T++ +I K AE +F +M P+ I
Sbjct: 270 KSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
T+ +I + A + ++ +G + N +L C G +A L +
Sbjct: 330 TFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM 389
Query: 422 HNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
+G+ PD TY L Y K E ++ K M + G+V + F + F
Sbjct: 390 KMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGF 443
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 144/326 (44%), Gaps = 13/326 (3%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH--TRDKAKALAKAL 204
+Y ++ + G R ++ + M GC D N ++ A D+A L + L
Sbjct: 148 MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKL 207
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
+F C+ +IV+YN +L+ A+ V L E+ AP+I T+N ++
Sbjct: 208 AFFG-------CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+NG+ + + VL++M + C PDI + +ID K + ++ + KP
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN 320
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREI 382
+ +N+++ A +AE + +M +T+ ++ +C N V R E+
Sbjct: 321 VVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF--FCQNGLVDRVIEL 378
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+++ G V T ++ +C GL EA +L ++ + G P++ +Y ++ K
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFF 468
A ++L+ +M Q G PN F
Sbjct: 439 AGRWVDAEELMSQMIQQGCPPNPVTF 464
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 154/366 (42%), Gaps = 52/366 (14%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DTG + ++ + ++G A+ L ++ GC D YNA++ K +AK
Sbjct: 180 DTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVL--------KGLCMAKR 231
Query: 204 LGYFQK-MKGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
G ++ M M R C PNIVT+N L+ + ++V+ + ++ E PDI Y
Sbjct: 232 WGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYAT 291
Query: 261 VMDAYGKNGMI-----------------------------------KEMESVLSRMKSNQ 285
++D K G + KE E +LS M
Sbjct: 292 IIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
C D +TFN+L+D + + D++ ++ + ++ P + T+ ++I + K L +A
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSR---AREIFDELSKLGKDMKVSTLNAML 402
+ + M++ P+ ++Y I + G C + R A E+ ++ + G T N ++
Sbjct: 412 MLLKSMSSCGCKPNTVSYT--IVLKGLC-SAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
C GL +A L + G +PD +Y + KA E +LL M GI
Sbjct: 469 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGIS 528
Query: 463 PNKRFF 468
PN +
Sbjct: 529 PNTIIY 534
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 172/411 (41%), Gaps = 27/411 (6%)
Query: 68 SKRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQ 127
+KR EEL E+VRV D P + T N + + LFE +
Sbjct: 229 AKRWGDVEEL-MDEMVRV------DCAPNIVTFNTLIGYLCRNG---LFERVH------- 271
Query: 128 CLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
EV M + D +Y+ +I + K+G +A + + M + G +P+ YN ++
Sbjct: 272 --EVLAQM-SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVL 328
Query: 188 TAHLHTRDKAKALAKALG-YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
L + ++ K + L FQK C + VT+NIL+ Q VD+V L +++
Sbjct: 329 KG-LCSAERWKEAEELLSEMFQK-----DCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 382
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
PD+ TY V++ + K G+I E +L M S CKP+ +++ +++ +
Sbjct: 383 LSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRW 442
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
E++ ++ P TFN++I K L +A + ++M +P I+Y +
Sbjct: 443 VDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTV 502
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I G A E+ + + G +++ A G + +F+N + +
Sbjct: 503 IDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTI 562
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
D+ Y + + K + M NG +PN+ + ++ +S
Sbjct: 563 RSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLAS 613
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 125/299 (41%), Gaps = 9/299 (3%)
Query: 180 PSVYNAL-ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
P+ Y + L TR + +A AL +M + C P Y+++L A ++
Sbjct: 109 PNAYTFFPVVRGLCTRGR---IADALEVLDEMS-FKGCAPIPPMYHVILEAACRSGGFRN 164
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+ + +H D N V++A + G + E +L ++ C+ DI+++N ++
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
+ + +E++ ++ P + TFN++I + L + V +M+ TP
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284
Query: 359 SFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADL 416
Y II G C ++ A EI + + G V N +L+ C EA+
Sbjct: 285 DIRMYATIID--GICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEE 342
Query: 417 LFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETF 475
L D T+ +L + + + + V +LL++M +G +P+ + + F
Sbjct: 343 LLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 94/230 (40%), Gaps = 4/230 (1%)
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
+ P+ YT+ V+ G I + VL M C P +++++++ + F
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 311 QVFKSLMHSKEKPTLPTFN-SMIIN-YGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+V ++ MH+K TL T N ++++N + +A + +K+ ++Y ++
Sbjct: 167 RVLEA-MHAK-GCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
E+ DE+ ++ + T N ++ C NGL + G TP
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
D Y + K E+ ++L RM G+ PN + L+ S+
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSA 334
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 156/356 (43%), Gaps = 14/356 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ + LGK ++ + M+K+ Y+ ++ L+ + A+ + EM
Sbjct: 147 MIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDEMPKY 206
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC PD V+ L+ A K ++ +A F+ M+ R PN+ + LL +
Sbjct: 207 GCEPDEYVFGCLLDALC----KNGSVKEAASLFEDMR--VRFNPNLRHFTSLLYGWCREG 260
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ + + ++ E+ PDI YN ++ Y + G +++ +L+ MK C P+ +F
Sbjct: 261 KIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFT 320
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+LI S+ K + D+ ++F + S + + T+ ++I + K KA + M
Sbjct: 321 ILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQK 380
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ PS ++Y CI+ + + + E+ +E+ K+G ++ N M+ C G EA
Sbjct: 381 GHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEA 440
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKAN--------MKELVQKLLKRMEQNGIV 462
L+ G+ P TY L+ + KE+V++ L Q G +
Sbjct: 441 VRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTL 496
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 107/251 (42%), Gaps = 6/251 (2%)
Query: 222 TYNILLRACAQARNVDQVNALFKELHES---ILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
Y +++ + R V AL +E+ + +L P+++ +M + M+K+ VL
Sbjct: 143 VYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIV--LMRRFASVRMVKKAVEVL 200
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
M C+PD F L+D+ K + + +F+ M + P L F S++ + +
Sbjct: 201 DEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFED-MRVRFNPNLRHFTSLLYGWCRE 259
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
+A++V ++ + P + Y ++ Y + A ++ E+ K+ ++
Sbjct: 260 GKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASF 319
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
+++++C EA +F G D TY L + K + ++L M Q
Sbjct: 320 TILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQ 379
Query: 459 NGIVPNKRFFL 469
G P++ +L
Sbjct: 380 KGHDPSQLSYL 390
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 74/190 (38%), Gaps = 6/190 (3%)
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII---NYGKARLQGKAEYVF 348
+ +I + GK + F + + + + KE P + T I+ + R+ KA V
Sbjct: 143 VYKAMIKTLGKMRQFGAVWALIEEM--RKENPYMLTPEVFIVLMRRFASVRMVKKAVEVL 200
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
+M P + C++ +V A +F+++ ++ + + ++L +C
Sbjct: 201 DEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDM-RVRFNPNLRHFTSLLYGWCRE 259
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G EA + G PD Y L Y +A LL M++ PN F
Sbjct: 260 GKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASF 319
Query: 469 LEALETFSSS 478
+++F +
Sbjct: 320 TILIQSFCKT 329
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 140/327 (42%), Gaps = 5/327 (1%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
IY+ LI + G A +FS M + G + +Y +I K
Sbjct: 144 IYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFE----L 199
Query: 207 FQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+QKMK + PN+ TYN L+ + + +F E+ + +A + TYN ++
Sbjct: 200 YQKMK-LVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLC 258
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
+ G + + E +L RMK P TFN+L+D DK + L PTL
Sbjct: 259 RKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLV 318
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T+N +I + K + ++M +PS +TY ++ + D++ +A E+F +
Sbjct: 319 TYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLM 378
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
++G T ++ C+ G EA L+++ M + P+ Y + Y K
Sbjct: 379 KRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNS 438
Query: 447 ELVQKLLKRMEQNGIVPNKRFFLEALE 473
K L+ M +NG+ PN ++ ++
Sbjct: 439 YKALKFLEEMVKNGVTPNVASYISTIQ 465
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 133/285 (46%), Gaps = 6/285 (2%)
Query: 196 KAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
K+ L + G+F + G R + ++ ++ I ++A + NV + L ++ ++P++
Sbjct: 85 KSGNLDRTWGFFTEYLG--RTQFDVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNV 142
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
+ Y +++A +NG I + + + SRM + + ++I+ + K+ ++++
Sbjct: 143 FIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQK 202
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC-- 373
+ P L T+NS+I Y + A VF +++ + +TY +I G C
Sbjct: 203 MKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIG--GLCRK 260
Query: 374 DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
VS+A + + + + + T N +++ C G +A E +G+ P TY
Sbjct: 261 GQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTY 320
Query: 434 KLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+L ++K +V +L++ ME GI P+K + + TF S
Sbjct: 321 NILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRS 365
>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 766
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 160/352 (45%), Gaps = 10/352 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
LF+ L KS L +F + + Y D Y+ LI + A L EMR +
Sbjct: 399 LFDGLCKSGLTEISLSMFHNLGAEG-YKHDVISYNTLINGFVLQRDMGSACKLVHEMRMN 457
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P+ +N LI H K + L KAL F M + + NI T NI+ +
Sbjct: 458 GSVPNSFTFNRLI----HGFCKRQRLDKALEVFTIMLKV-GVQLNIFTCNIMADEFNREG 512
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ + L E+ + + P+ YTYN V+ K ++ VL M N P I +N
Sbjct: 513 HFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYN 572
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY--GKARLQGKAEYVFQKMT 352
LID Y K+ K ++ ++ P++ T+ +M+IN ++++Q +A Y+F++M
Sbjct: 573 TLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTY-TMLINMFSNRSKMQ-EAYYLFKEMI 630
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
P I + CII + ++ A +++E+S+ GK V T +++ Y
Sbjct: 631 KKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMD 690
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+AD LF VTPD TY L Y + V+++ M++NG+ PN
Sbjct: 691 KADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPN 742
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 151/351 (43%), Gaps = 41/351 (11%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRD---KAKALAKALGYF 207
L+ + QT LF E+++SG P P+V+ I + + + K + KA
Sbjct: 219 LLNCFAEANQTEFIRSLFEELKDSG--PSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVL 276
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M+ M P +VTY + +A V+ L ++L + Y YN V+ + +
Sbjct: 277 EEME-MNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCR 335
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
NG + E +L M+S+ P ++++LID K+ +K + + ++ S KP+L T
Sbjct: 336 NGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVT 395
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT------------------- 368
++S+ K+ L + +F + A Y I+Y +I
Sbjct: 396 YSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMR 455
Query: 369 --------------MYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPT 412
++G+C + +A E+F + K+G + + T N M + + G
Sbjct: 456 MNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFW 515
Query: 413 EADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
EA L ++G+ P+S TY ++ K K E ++L M +N + P
Sbjct: 516 EALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFP 566
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 136/321 (42%), Gaps = 5/321 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ +I + G+ A L +MR+ G P Y+ LI K + KAL
Sbjct: 326 YNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLC----KKGQVEKALDLI 381
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M KP++VTY+ L ++ + ++F L D+ +YN +++ +
Sbjct: 382 EEMV-QSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVL 440
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ ++ M+ N P+ TFN LI + KRQ DK +VF ++ + + T
Sbjct: 441 QRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFT 500
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
N M + + +A + ++ + P+ TY +I +A E+ +
Sbjct: 501 CNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVML 560
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
K N +++ Y PT+A LL+ +G+ P TY +L ++ + +
Sbjct: 561 KNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQ 620
Query: 448 LVQKLLKRMEQNGIVPNKRFF 468
L K M + G+VP++ F
Sbjct: 621 EAYYLFKEMIKKGLVPDEIIF 641
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 117/264 (44%), Gaps = 9/264 (3%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY-----GKNGMIKE 273
NI++ N LL A+A + + +LF+EL +S +P+++TY +M+ Y GKN I +
Sbjct: 212 NILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVK 271
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
VL M+ N P ++T+ I + + ++ + L + +N++I
Sbjct: 272 ATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIH 331
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGK 391
+ + +A + + M + +P+ +Y +I G C V +A ++ +E+ +
Sbjct: 332 EFCRNGELHEAFELLEDMRSHGISPTAYSYSILID--GLCKKGQVEKALDLIEEMVQSNV 389
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
+ T +++ + C +GL + +F N G D +Y L + K
Sbjct: 390 KPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACK 449
Query: 452 LLKRMEQNGIVPNKRFFLEALETF 475
L+ M NG VPN F + F
Sbjct: 450 LVHEMRMNGSVPNSFTFNRLIHGF 473
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 90/194 (46%), Gaps = 9/194 (4%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI K+ A+ L+++M G P Y LI R K + +A F
Sbjct: 571 YNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINM-FSNRSK---MQEAYYLF 626
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
++M KG+ P+ + + ++ + ++ AL++E+ + +P++ TY ++D Y
Sbjct: 627 KEMIKKGL---VPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGY 683
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K + + + + ++MK + PD +T+ LI Y D++ ++F + + P
Sbjct: 684 FKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNY 743
Query: 326 PTFNSMIINYGKAR 339
+ ++ ++ G R
Sbjct: 744 TAYATLGLHLGVVR 757
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 141/333 (42%), Gaps = 4/333 (1%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y ++ + +G+ A+ + EMR GC P P +Y+ ++ A +R A+
Sbjct: 118 YFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAAC-SRGGGGGFRSAVRVL 176
Query: 208 QKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKELHESI-LAPDIYTYNGVMDAY 265
Q + G C ++ N++L A C Q +VD+ L ++L S PD+ +YN V+
Sbjct: 177 QDLHG-RGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGL 235
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
++ ++ M C P+++TFN LI + F+++ QV ++ P +
Sbjct: 236 CMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDI 295
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
+ +++ K A + +M + P+ + Y ++ + +A E+ E
Sbjct: 296 RMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAE 355
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ + T N +++ +C NGL L E G PD TY + + K +
Sbjct: 356 MFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGL 415
Query: 446 KELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ LLK M G PN + L+ S+
Sbjct: 416 IDEAVMLLKSMAACGCRPNTISYTIVLKGLCSA 448
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 147/357 (41%), Gaps = 51/357 (14%)
Query: 153 AVMGKKGQTRLAMWLFSEMRNS-GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQK-M 210
AV + G A+ L ++ S GC PD YNA++ K +AK G Q M
Sbjct: 197 AVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVL--------KGLCMAKRWGRVQDLM 248
Query: 211 KGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
+ M R C PN+VT+N L+ + ++V+ + ++ + PDI Y V+D K
Sbjct: 249 EEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKE 308
Query: 269 GMIKEMESVLSRMKS-----------------------------------NQCKPDIITF 293
G ++ +L RM S N C D +TF
Sbjct: 309 GHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTF 368
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N+L+D + + ++ ++ + ++ P + T+ ++I + K L +A + + M A
Sbjct: 369 NILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAA 428
Query: 354 MKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P+ I+Y I + G C + A ++ ++ + G T N ++ C GL
Sbjct: 429 CGCRPNTISYT--IVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLV 486
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+A L + G +PD +Y + KA + +LL M G+ PN +
Sbjct: 487 EQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIY 543
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 135/322 (41%), Gaps = 5/322 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +Y+ ++ + K+G +A + M + G +P+ YN ++ +A
Sbjct: 294 DIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELL 353
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F C + VT+NIL+ Q V +V L +++ E PD+ TY V++
Sbjct: 354 AEMFDN-----DCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVIN 408
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ K G+I E +L M + C+P+ I++ +++ + + E + ++ P
Sbjct: 409 GFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSP 468
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
TFN++I K L +A + ++M +P I+Y +I G A E+
Sbjct: 469 NPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELL 528
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ + G +++ A G +F+N ++ + D+ Y + + K
Sbjct: 529 NVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKR 588
Query: 444 NMKELVQKLLKRMEQNGIVPNK 465
+ + L M +G +PN+
Sbjct: 589 GGTDRAIEFLAYMVSSGCMPNE 610
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 106/249 (42%), Gaps = 5/249 (2%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ D Y+ +I K+G A+ L M GCRP+ Y T L A+
Sbjct: 397 VPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISY----TIVLKGLCSAERWV 452
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
A +M + C PN VT+N ++ + V+Q L K++ + +PD+ +Y+ V
Sbjct: 453 DAEDLMSQMI-EQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTV 511
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+D GK G E +L+ M + P+ I ++ + + K +++ Q+F ++
Sbjct: 512 IDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTI 571
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
+ +N++I + K +A M + P+ TY +I V A+E
Sbjct: 572 RSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQE 631
Query: 382 IFDELSKLG 390
+ EL G
Sbjct: 632 MLTELCSKG 640
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 92/234 (39%), Gaps = 7/234 (2%)
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
+ P+ YTY V+ A G I + SVL M+ C P +++++++ R
Sbjct: 111 VPPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFR 170
Query: 311 QVFKSL--MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM----TAMKYTPSFITYE 364
+ L +H + L N ++ G + + + T+ P ++Y
Sbjct: 171 SAVRVLQDLHGR-GCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYN 229
Query: 365 CIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNM 424
++ R +++ +E+ ++G V T N ++ C NGL + +
Sbjct: 230 AVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDH 289
Query: 425 GVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
G TPD Y + K E+ ++L RM G+ PN + L+ S+
Sbjct: 290 GCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSA 343
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 154/364 (42%), Gaps = 35/364 (9%)
Query: 130 EVFRWMQKQRWY-IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
E R + R Y + D Y+ LI + KK + AM M N GC PD YN +I
Sbjct: 242 EAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIID 301
Query: 189 AH--LHTRDKAKALAK----------ALGYFQKMKGM------ERC------------KP 218
+ + +A L K + Y + G+ ER KP
Sbjct: 302 GYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKP 361
Query: 219 NIVTYNILLRA-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
+IV YN L++ C Q + + + E+ E PDI TYN V++ K G I + V
Sbjct: 362 DIVVYNSLVKGLCLQGLILHALQVM-NEMAEEGCHPDIQTYNIVINGLCKMGNISDATVV 420
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
++ PD+ TFN LID Y KR D Q+ + + P T+NS++ K
Sbjct: 421 MNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCK 480
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVST 397
A + FQ+M P+ ITY +I + + + A ++ ++S+ G +
Sbjct: 481 AGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVS 540
Query: 398 LNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT-KANMKELVQKLLKRM 456
N ++ +C NG A LLF+ G + + T+ L A++ K NM + +K+ M
Sbjct: 541 FNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNM-HMAEKIFDEM 599
Query: 457 EQNG 460
G
Sbjct: 600 LSKG 603
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 156/344 (45%), Gaps = 17/344 (4%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
+ ++ D Y LI + +G A+ LF+E + G +PD VYN+L+ K
Sbjct: 322 KGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLV--------KGL 373
Query: 199 AL-AKALGYFQKMKGM--ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
L L Q M M E C P+I TYNI++ + N+ + + PD+
Sbjct: 374 CLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDV 433
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
+T+N ++D Y K + ++ RM PD IT+N +++ K +++ + F+
Sbjct: 434 FTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQE 493
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
++ P T+N +I N+ ++ +A V KM+ P +++ +I YG+C N
Sbjct: 494 MILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLI--YGFCRN 551
Query: 376 --VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTY 433
+ A +F +L + G T N ++ A+ A+ +F+ + G DS TY
Sbjct: 552 GDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTY 611
Query: 434 KLLYKAYTK-ANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
++L K AN+ L++ M + G +P+ F + + +
Sbjct: 612 RVLIDGSCKTANVDRAYMHLVE-MIKKGFIPSMSTFGRVINSLT 654
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 148/341 (43%), Gaps = 18/341 (5%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
LE+F Q + D +Y+ L+ + +G A+ + +EM GC PD YN +I
Sbjct: 348 LELFNEAQA-KGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 406
Query: 189 AHL---HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
+ D + A+ MKG P++ T+N L+ + +D L +
Sbjct: 407 GLCKMGNISDATVVMNDAI-----MKGY---LPDVFTFNTLIDGYCKRLKLDSALQLVER 458
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ E +APD TYN V++ K G + E+ M C P+ IT+N+LI+++ +
Sbjct: 459 MWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNK 518
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKAR---LQGKAEYVFQKMTAMKYTPSFIT 362
++ +V + P +FN++I YG R L+G A +FQK+ Y+ + T
Sbjct: 519 MEEASKVIVKMSQEGLHPDAVSFNTLI--YGFCRNGDLEG-AYLLFQKLEEKGYSATADT 575
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
+ +I + N+ A +IFDE+ G T +++ C A +
Sbjct: 576 FNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMI 635
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
G P ST+ + + T + ++ M + G+VP
Sbjct: 636 KKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 676
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 130/321 (40%), Gaps = 20/321 (6%)
Query: 177 RPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
R P+ + L A + +A L A+ F++M + C P YN ++ A A
Sbjct: 46 RLSPATIHPLYVASIRAYARAGRLRDAVDAFERMD-LFACPPAAPAYNAIMDALVDAAYH 104
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
DQ + ++ + + ++PD++T+ + ++ + L +++ + + ++
Sbjct: 105 DQAHKVYVRMLAAGVSPDLHTHTIRLRSF---CLTARPHIALRLLRALPHRGAVAYCTVV 161
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
Y D Q+F ++H+ P L FN ++ K +A + K+
Sbjct: 162 CGLYAHGHTHDA-RQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGM 220
Query: 357 TPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ + TY I + G C+ + A + D + V T N ++ C +P EA
Sbjct: 221 SINLFTYN--IWIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEA 277
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
N G PD TY + Y K +M + +LLK G VP++ T
Sbjct: 278 MHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQ-------VT 330
Query: 475 FSSSLAGSQSGSAKTDLTRSL 495
+ S + G A+ D+ R+L
Sbjct: 331 YCSLINGL---CAEGDVERAL 348
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 131/368 (35%), Gaps = 84/368 (22%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
+Y I + G+ R A+ F M C P YNA++ AL A +
Sbjct: 55 LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIM----------DALVDAAYH 104
Query: 207 FQKMKGMER-----CKPNIVTYNILLRA-CAQAR-------------------------- 234
Q K R P++ T+ I LR+ C AR
Sbjct: 105 DQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGL 164
Query: 235 ----NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS------- 283
+ LF ++ + + P++ +N V+ A K G + E +L ++
Sbjct: 165 YAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINL 224
Query: 284 --------NQCK-------------------PDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
C+ PD++T+N LI K+ + + +
Sbjct: 225 FTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRM 284
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--D 374
M+ P T+N++I Y K + +A + + + P +TY +I G C
Sbjct: 285 MNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLIN--GLCAEG 342
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
+V RA E+F+E G + N++++ C+ GL A + G PD TY
Sbjct: 343 DVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYN 402
Query: 435 LLYKAYTK 442
++ K
Sbjct: 403 IVINGLCK 410
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 156/351 (44%), Gaps = 10/351 (2%)
Query: 129 LEVF-RWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
+EV R ++K+ + D Y+ LI + AM L EM + GC+PD YN L+
Sbjct: 1 MEVLDRQLEKECY--PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLV 58
Query: 188 TAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQVNALFKEL 246
K L +A+ + M +PN++T+NI+LR+ C+ R +D L E+
Sbjct: 59 NGMC----KEGRLDEAIKFLNSMPSYGS-QPNVITHNIILRSMCSTGRWMD-AEKLLTEM 112
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
+P + T+N +++ + G++ +L +M ++ C P+ +++N L+ + K +
Sbjct: 113 VRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKM 172
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
D+ Q + ++ P + T+N+M+ K A + ++++ +P ITY +
Sbjct: 173 DRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTV 232
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I +A E+ E+ G V T ++++ G EA F + GV
Sbjct: 233 IDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGV 292
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
P++ TY + KA + L M G P + + +E ++
Sbjct: 293 KPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIAN 343
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 11/270 (4%)
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
+ C P+++TY IL+ A V Q L E+ PD+ TYN +++ K G + E
Sbjct: 10 KECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDE 69
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
L+ M S +P++IT N+++ S + E++ ++ P++ TFN +I
Sbjct: 70 AIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILIN 129
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGK 391
+ L G+A + +KM TP+ ++Y + ++G+C + RA + + + G
Sbjct: 130 FLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPL--LHGFCKEKKMDRAIQYLEIMVSRGC 187
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
+ T N ML A C +G A L + G +P TY + +K + +
Sbjct: 188 YPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVE 247
Query: 452 LLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
LL M G+ P+ + T+SS +AG
Sbjct: 248 LLHEMRGKGLKPD-------VITYSSLIAG 270
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 114/266 (42%), Gaps = 13/266 (4%)
Query: 133 RWMQKQRWYI--------ADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYN 184
RWM ++ ++ LI + +KG A+ + +M GC P+ YN
Sbjct: 101 RWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYN 160
Query: 185 ALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
L LH K K + +A+ Y + M C P+IVTYN +L A + VD L
Sbjct: 161 PL----LHGFCKEKKMDRAIQYLEIMVS-RGCYPDIVTYNTMLTALCKDGKVDAAVELLN 215
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
+L +P + TYN V+D K G + +L M+ KPD+IT++ LI +
Sbjct: 216 QLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREG 275
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYE 364
++ + F + KP T+NS++ KA+ +A M + P+ ++Y
Sbjct: 276 KVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYT 335
Query: 365 CIITMYGYCDNVSRAREIFDELSKLG 390
+I A E+ +EL G
Sbjct: 336 ILIEGIANEGLAKEALELLNELCSRG 361
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 122/278 (43%), Gaps = 17/278 (6%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
L +EM GC P +N LI + L +A+ +KM C PN ++YN L
Sbjct: 108 LLTEMVRKGCSPSVVTFNILINFLC----RKGLLGRAIDILEKMP-THGCTPNSLSYNPL 162
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
L + + +D+ + + PDI TYN ++ A K+G + +L+++ S C
Sbjct: 163 LHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGC 222
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
P +IT+N +ID K D+ ++ + KP + T++S+I + +GK E
Sbjct: 223 SPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSR---EGKVEE 279
Query: 347 V---FQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFD-ELSKLGKDMKVSTLNA 400
F + P+ TY I M+G C RA + +SK K +VS
Sbjct: 280 AIKFFHDVEGFGVKPNAFTYNSI--MFGLCKAQQTDRAIDFLAYMISKGCKPTEVS-YTI 336
Query: 401 MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
++E GL EA L + GV SS +++ +
Sbjct: 337 LIEGIANEGLAKEALELLNELCSRGVVKKSSAEQVVVR 374
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 168/385 (43%), Gaps = 24/385 (6%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
+ + LGK ++ + M+K+ Y+ ++ L+ + A+ + EM
Sbjct: 170 MIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDEMPKY 229
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC PD V+ L+ A K ++ +A F+ M+ R PN+ + LL +
Sbjct: 230 GCEPDEYVFGCLLDALC----KNGSVKEAASLFEDMR--VRFNPNLRHFTSLLYGWCREG 283
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ + + ++ E+ PDI YN ++ Y + G +++ +L+ MK C P+ +F
Sbjct: 284 KIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFT 343
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+LI S+ K + D+ ++F + S + + T+ ++I + K KA + M
Sbjct: 344 ILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQK 403
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ PS ++Y CI+ + + + E+ +E+ K+G ++ N M+ C G EA
Sbjct: 404 GHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEA 463
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
L+ G+ P TY L+ + + Q +V +F E +E
Sbjct: 464 VRLWGEMQAGGLNPGLDTYILMVHGF---------------LSQGCLVEACDYFKEMVE- 507
Query: 475 FSSSLAGSQSGSAKTDLTRSLSTAK 499
L+ Q G+ K +LT +L A+
Sbjct: 508 -RGLLSAPQYGTLK-ELTNALLRAE 530
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 110/254 (43%), Gaps = 12/254 (4%)
Query: 222 TYNILLRACAQARNVDQVNALFKELHES---ILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
Y +++ + R V AL +E+ + +L P+++ +M + M+K+ VL
Sbjct: 166 VYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIV--LMRRFASVRMVKKAVEVL 223
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
M C+PD F L+D+ K + + +F+ M + P L F S++ YG
Sbjct: 224 DEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFED-MRVRFNPNLRHFTSLL--YGWC 280
Query: 339 RLQGK---AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKV 395
R +GK A++V ++ + P + Y ++ Y + A ++ E+ K+
Sbjct: 281 R-EGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNA 339
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
++ +++++C EA +F G D TY L + K + ++L
Sbjct: 340 ASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDD 399
Query: 456 MEQNGIVPNKRFFL 469
M Q G P++ +L
Sbjct: 400 MIQKGHDPSQLSYL 413
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 74/190 (38%), Gaps = 6/190 (3%)
Query: 292 TFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII---NYGKARLQGKAEYVF 348
+ +I + GK + F + + + + KE P + T I+ + R+ KA V
Sbjct: 166 VYKAMIKTLGKMRQFGAVWALIEEM--RKENPYMLTPEVFIVLMRRFASVRMVKKAVEVL 223
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
+M P + C++ +V A +F+++ ++ + + ++L +C
Sbjct: 224 DEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDM-RVRFNPNLRHFTSLLYGWCRE 282
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G EA + G PD Y L Y +A LL M++ PN F
Sbjct: 283 GKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASF 342
Query: 469 LEALETFSSS 478
+++F +
Sbjct: 343 TILIQSFCKT 352
>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
Length = 894
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 142/334 (42%), Gaps = 12/334 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y +I +G+K L EM+ G P+ +YN +I A R ++ALA
Sbjct: 349 YGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALA----VL 404
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+M R P++VT+N L+ A + +V++ L +E L P+ +Y ++ +
Sbjct: 405 NQMVA-SRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCV 463
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + +L M PD++T LI D+ V + + + P
Sbjct: 464 RGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANI 523
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
+N +I K R+ A+ + +M K P Y +I + D +S AR+IF+ +
Sbjct: 524 YNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFME 583
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ G + NAM++ YC +G+ EA + + +G PD TY L Y K +
Sbjct: 584 EKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIK 643
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAG 481
+ L M + PN + T++S + G
Sbjct: 644 AALRFLCDMMKRRCKPN-------IVTYASLICG 670
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 144/334 (43%), Gaps = 25/334 (7%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
G+ D+ L + R +R + D IY+ LI+ + KK A L EM +PD
Sbjct: 500 GQVDEAL----MVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPD 555
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQV 239
VY LI + R + A+ + F + KG R +IV YN +++ ++ +++
Sbjct: 556 KFVYTTLIDGFI--RSDKLSDARKIFEFMEEKGGYR---DIVAYNAMIKGYCKSGMMNEA 610
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
+ + PD +TY ++D Y K G IK L M +CKP+I+T+ LI
Sbjct: 611 VMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICG 670
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
Y D E +F S+ P + + +I + K +A F+ M +P+
Sbjct: 671 YCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPN 730
Query: 360 FITYECIIT-----MYGY----CDNVSRAR------EIFDELSKLGKDMKVSTLNAMLEA 404
T ++ YG C + +A ++F L G D ++S NA++ +
Sbjct: 731 DATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFS 790
Query: 405 YCMNGLPTEADLLFENSHNMGVTPDSSTY-KLLY 437
C + + +A L E N G PD T+ LLY
Sbjct: 791 LCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLY 824
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 123/267 (46%), Gaps = 4/267 (1%)
Query: 214 ERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKE 273
E C P V YN+L+ + +V + L E+ + P + TY ++ G+ + +
Sbjct: 305 EGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTK 364
Query: 274 MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMII 333
+ES+L MK P++ +N +I + K ++ + V ++ S+ P + TFN++I
Sbjct: 365 IESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIA 424
Query: 334 NYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGK 391
+ + +A + ++ + P+ ++Y +I +G+C V A ++ E+ G
Sbjct: 425 AFCREGDVEEALKLLREAIRRELEPNQLSYTPLI--HGFCVRGEVMVASDLLVEMIGRGH 482
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
V TL A++ ++G EA ++ E V PD++ Y +L K M +
Sbjct: 483 TPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKN 542
Query: 452 LLKRMEQNGIVPNKRFFLEALETFSSS 478
LL M + + P+K + ++ F S
Sbjct: 543 LLVEMLEQKVQPDKFVYTTLIDGFIRS 569
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 143/376 (38%), Gaps = 36/376 (9%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
KSD L +E W K+R + IY+ +I + K A+ + ++M S PD
Sbjct: 359 KSD--LTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDV 416
Query: 181 SVYNALITAHLHTRDKAKAL------------AKALGYFQKMKGMERC------------ 216
+N LI A D +AL L Y + G C
Sbjct: 417 VTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGF--CVRGEVMVASDLL 474
Query: 217 --------KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKN 268
P++VT L+ + VD+ + +++ E + PD YN ++ K
Sbjct: 475 VEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKK 534
Query: 269 GMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
M+ +++L M + +PD + LID + + ++F+ + + +
Sbjct: 535 RMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAY 594
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
N+MI Y K+ + +A M + P TY +I Y ++ A ++ K
Sbjct: 595 NAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMK 654
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
+ T +++ YC G A++LF + + G+ P+ Y +L + K +
Sbjct: 655 RRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQ 714
Query: 449 VQKLLKRMEQNGIVPN 464
+ M N PN
Sbjct: 715 AAAYFEHMLLNHCSPN 730
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 141/342 (41%), Gaps = 28/342 (8%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
DT ++ LI + +G+ A+ LF +M G RPD Y LI + + A+
Sbjct: 130 DTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLL 189
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
QK C+PN+ YN ++ + + R V + LF E+ ++PDI+TYN ++
Sbjct: 190 GSMVQK-----NCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIH 244
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
A K + ++L+ M ++ PD+++FN ++D+ K + V ++ +P
Sbjct: 245 ALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEP 304
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--------- 374
+ T+ +++ + +A VF M P+ I+Y +I GYC
Sbjct: 305 NVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLIN--GYCKIQRIDKAIH 362
Query: 375 ------------NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSH 422
N+ A ++FD + G V + N ++ YC +A LF
Sbjct: 363 YTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMC 422
Query: 423 NMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ PD+ TY L + L M +PN
Sbjct: 423 RQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPN 464
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 160/414 (38%), Gaps = 102/414 (24%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y LI + K G T A+ L M C+P+ YN +I + K + + +A
Sbjct: 165 DVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLC----KDRQVTEA 220
Query: 204 LGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
F +M KG+ P+I TYN L+ A V L E+ +S + PD+ ++N V
Sbjct: 221 FNLFSEMVTKGIS---PDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTV 277
Query: 262 MDAYGKNGMIKEMESVLSRM-----------------------------------KSNQC 286
+DA K G + E V+ +M C
Sbjct: 278 VDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGC 337
Query: 287 KPDIITFNLLIDSYGKRQAFDK----------------MEQ---VFKSLMHSKEKPTLPT 327
P++I++N LI+ Y K Q DK M++ VF +++ P + +
Sbjct: 338 MPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVIS 397
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL- 386
+N++I Y K + KA Y+F +M + P +TY +I + + + A +F E+
Sbjct: 398 YNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMV 457
Query: 387 ------------------------------------SKLGKDMKVSTLNAMLEAYCMNGL 410
S L D++V+ N ++ C G
Sbjct: 458 ACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVN--NIAIDGMCRAGE 515
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A LF N + G+ PD TY ++ + + + KL + M++NG N
Sbjct: 516 LEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLN 569
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 135/323 (41%), Gaps = 28/323 (8%)
Query: 163 LAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVT 222
A + +++ G +PD + + LI + K + +AL F KM G E +P++VT
Sbjct: 114 FAFSVLAKILKLGHQPDTATFTTLIRG-ICVEGK---IGEALHLFDKMIG-EGFRPDVVT 168
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y L+ + N L + + P+++ YN ++D+ K+ + E ++ S M
Sbjct: 169 YGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMV 228
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
+ PDI T+N LI + + + + ++ SK P + +FN+++ K
Sbjct: 229 TKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVT 288
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNA 400
+A V KM P+ +TY + M G+C + A ++FD + G V + N
Sbjct: 289 EAHDVVDKMIQRGVEPNVVTYTAL--MDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNT 346
Query: 401 MLEAYC--------------MNGLPT-----EADLLFENSHNMGVTPDSSTYKLLYKAYT 441
++ YC M+ EA +F+ G P+ +Y L Y
Sbjct: 347 LINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYC 406
Query: 442 KANMKELVQKLLKRMEQNGIVPN 464
K + L M + ++P+
Sbjct: 407 KIQRIDKAMYLFGEMCRQELIPD 429
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 125/291 (42%), Gaps = 9/291 (3%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A+ +F M GC P+ YN LI + K + + KA+ F +M E P+ VTY
Sbjct: 379 AVKVFDTMVCKGCMPNVISYNTLINGYC----KIQRIDKAMYLFGEMCRQELI-PDTVTY 433
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
+ L+ + ALF E+ P++ TY ++D KN + E ++L ++
Sbjct: 434 STLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEG 493
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK 343
+ PDI N+ ID + + +F +L +P + T++ MI + L +
Sbjct: 494 SNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDE 553
Query: 344 AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
A +F++M T + Y I + + SRA ++ E+ G ST+ ++
Sbjct: 554 ASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVK 613
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSST---YKLLYKAYT-KANMKELVQ 450
+GL + N T DSS+ +L K + + N +LVQ
Sbjct: 614 MLSDDGLDQSLKQILRNGCKWISTFDSSSSTGLHILQKGISHERNESDLVQ 664
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 122/302 (40%), Gaps = 9/302 (2%)
Query: 171 MRNSGCRPDPSVYNALITAHL---HTRDKAKALA-----KALGYFQKMKGMERCKPNIVT 222
MR RP + +L+ L H R +K+L A+ F +M M+ P+ V
Sbjct: 5 MRRPSSRPSGTQMLSLLPHFLSLSHNRFHSKSLHFNTIDGAISSFNRMLRMQP-PPSTVD 63
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
+N LL + A+ ++ + +L ++ + P+IYT + +++++ + SVL+++
Sbjct: 64 FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
+PD TF LI + +F ++ +P + T+ ++I K
Sbjct: 124 KLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS 183
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
A + M P+ Y II V+ A +F E+ G + T N+++
Sbjct: 184 AAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLI 243
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
A C L + + PD ++ + A K ++ +M Q G+
Sbjct: 244 HALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVE 303
Query: 463 PN 464
PN
Sbjct: 304 PN 305
>gi|449018641|dbj|BAM82043.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 805
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 186/419 (44%), Gaps = 21/419 (5%)
Query: 63 WTRPRSKRGRKSEE---LESKELVRVLMRSFSD---KEPLVRTLNKY---------VKVV 107
+T PR+ + S E ES+ L V + +D + PL R+ +++ V+ +
Sbjct: 299 FTPPRAPASKTSYERRLAESRNLFPVSNLNVADADLRSPLHRSASQHRSDGSLAPQVREI 358
Query: 108 RSEHCF-LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMW 166
RS + L KS + L + R ++++ D YS LI+ +GK G + A+
Sbjct: 359 RSTRQLNKILSALYKSGRAADALSLCRIVEREGHIEIDVASYSILISCLGKCGASAQAIE 418
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
+F +M +G P+ ++AL A +A+ FQ ++ + N+V YN +
Sbjct: 419 MFHKMIRNGVAPNAFTFSALFGALTD----GAFFDQAMRLFQMIRASYPNELNVVVYNAV 474
Query: 227 LRACAQARNVDQVNALFKELHESI-LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ 285
L+ +A +D L ++ ++ + PDI TY ++D K + +VL RM+
Sbjct: 475 LKYVGRAGRIDAALDLLGQMEQNRNVQPDIVTYGTILDICAKKQDVSLAYAVLDRMRKRG 534
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
+P+ + LID+ + D+ E +F+ L + L N+++ + +A++ +A
Sbjct: 535 MRPNNFCYASLIDACARAGLPDQAESLFRQLRAEGLEYDLFICNALLGAFARAKMVERAF 594
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
F++M + IT+ +IT +A + F+ + K +T NA+++A
Sbjct: 595 QAFEEMRSAGVRGDRITFNTLITAAARAREFDKAWKAFETMKKSNISADATTYNALIDAC 654
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+G+ A LF + P T+ L A TK ++L M G+ P+
Sbjct: 655 SKSGMTELAFALFNEMRQAHLQPTIFTFNALIGACTKLQDMRRATQVLMLMHGFGVYPD 713
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 137/295 (46%), Gaps = 6/295 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM-RN 173
LF L + Q + +F+ ++ + +Y+ ++ +G+ G+ A+ L +M +N
Sbjct: 438 LFGALTDGAFFDQAMRLFQMIRASYPNELNVVVYNAVLKYVGRAGRIDAALDLLGQMEQN 497
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
+PD Y ++ + + + +LA A+ + +GM +PN Y L+ ACA+A
Sbjct: 498 RNVQPDIVTYGTIL--DICAKKQDVSLAYAVLDRMRKRGM---RPNNFCYASLIDACARA 552
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
DQ +LF++L L D++ N ++ A+ + M++ M+S + D ITF
Sbjct: 553 GLPDQAESLFRQLRAEGLEYDLFICNALLGAFARAKMVERAFQAFEEMRSAGVRGDRITF 612
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N LI + + + FDK + F+++ S T+N++I K+ + A +F +M
Sbjct: 613 NTLITAAARAREFDKAWKAFETMKKSNISADATTYNALIDACSKSGMTELAFALFNEMRQ 672
Query: 354 MKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
P+ T+ +I ++ RA ++ + G TLN +L A N
Sbjct: 673 AHLQPTIFTFNALIGACTKLQDMRRATQVLMLMHGFGVYPDTFTLNILLTACARN 727
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 13/168 (7%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D I + L+ + A F EMR++G R D +N LITA +A+ KA
Sbjct: 573 DLFICNALLGAFARAKMVERAFQAFEEMRSAGVRGDRITFNTLITAAA----RAREFDKA 628
Query: 204 LGYFQKMKGMERCKPNI----VTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
F+ MK K NI TYN L+ AC+++ + ALF E+ ++ L P I+T+N
Sbjct: 629 WKAFETMK-----KSNISADATTYNALIDACSKSGMTELAFALFNEMRQAHLQPTIFTFN 683
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
++ A K ++ VL M PD T N+L+ + + + FD
Sbjct: 684 ALIGACTKLQDMRRATQVLMLMHGFGVYPDTFTLNILLTACARNEDFD 731
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 155/369 (42%), Gaps = 39/369 (10%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +Y+ I GK G +A F E++ G +PD Y ++I KA L +A
Sbjct: 248 DIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLC----KAGRLGEA 303
Query: 204 LGYFQKMKG-----------------------------MER-----CKPNIVTYNILLRA 229
F +M+ +ER C P++V++N +L
Sbjct: 304 EELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTC 363
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
+ R VD+ +LF E+ + P+ TYN ++D G ++E +L M+ P+
Sbjct: 364 LGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPN 422
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
++T N+++D K + ++ ++F+S P T+ S+I GK +A +F+
Sbjct: 423 LLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFE 482
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
KM + + + Y +I + +IF EL + G ++ LN ++ G
Sbjct: 483 KMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAG 542
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFL 469
+ ++FE+ + G PD +Y +L TKA + M+Q G + R +
Sbjct: 543 EVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYN 602
Query: 470 EALETFSSS 478
++ F S
Sbjct: 603 AVVDGFCKS 611
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 162/354 (45%), Gaps = 13/354 (3%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L L ++ + + LE+ R MQ+ + + +++ L+ + ++GQ A+ L E++
Sbjct: 184 VLIGALAEARRPERALELLRQMQEVGYEVG-VHLFTTLVRALAREGQVADALALVDEVKG 242
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
S PD +YN I KA + A +F ++K + KP+ V+Y ++ +A
Sbjct: 243 SCLEPDIVLYNVCIDCF----GKAGNVDMAWKFFHELKA-QGLKPDDVSYTSMIWVLCKA 297
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ + LF ++ P Y YN ++ YG G ++ +L R++ C P +++F
Sbjct: 298 GRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSF 357
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
N ++ GK++ D+ +F+ +M +P T+N +I L G+ E ++ +
Sbjct: 358 NSILTCLGKKRKVDEALSLFE-VMKKDAEPNSSTYNIII---DMLCLGGRVEEAYRILDE 413
Query: 354 MKYT---PSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M++ P+ +T ++ + A +IF+ S+ G + T ++++ G
Sbjct: 414 MEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQ 473
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA LFE + G + Y L + + KE K+ K + + G P+
Sbjct: 474 VDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPD 527
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 162/396 (40%), Gaps = 33/396 (8%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ + L K+ K + ++F QR D Y LI +GKKGQ A LF +M +
Sbjct: 428 IMVDRLCKARKLEEAYKIFE-SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLD 486
Query: 174 SGCRPDPSVYNALI-TAHLHTRD------------------------------KAKALAK 202
+G +P VY +LI +H R KA + K
Sbjct: 487 AGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEK 546
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
F+ ++ P++ +Y+IL+ +A + + +F + + A D YN V+
Sbjct: 547 GRMIFEDIRSYGFL-PDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVV 605
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D + K+G + + +L MK +P + T+ ++D K D+ +F+ +
Sbjct: 606 DGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIE 665
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
+ ++S+I +GK +A + ++M TP+ T+ ++ + ++ A
Sbjct: 666 LNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVC 725
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
F + ++ T + ++ C +A + +++ G+ P+ TY + K
Sbjct: 726 FQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAK 785
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
L +R + NG +P+ F +E S++
Sbjct: 786 VGNITDAYSLFERFKANGGIPDAASFNALIEGMSNA 821
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 155/393 (39%), Gaps = 42/393 (10%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L K+ + + E+F M+ +R + Y+ +I G G+ A L +R GC P
Sbjct: 294 LCKAGRLGEAEELFAQMEAER-SVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIP 352
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
+N+++T K + + +AL F+ MK + +PN TYNI++ V++
Sbjct: 353 SVVSFNSILT----CLGKKRKVDEALSLFEVMK--KDAEPNSSTYNIIIDMLCLGGRVEE 406
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+ E+ + L P++ T N ++D K ++E + C PD +T+ LID
Sbjct: 407 AYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLID 466
Query: 299 SYGKR-------QAFDKM----------------------------EQVFKSLMHSKEKP 323
GK+ + F+KM ++FK L+ KP
Sbjct: 467 GLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKP 526
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
L N+ + KA K +F+ + + + P +Y +I IF
Sbjct: 527 DLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIF 586
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ + G + NA+++ +C +G +A + E V P +TY + K
Sbjct: 587 HAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKI 646
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+ + L + + GI N + ++ F
Sbjct: 647 DRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFG 679
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 111/248 (44%), Gaps = 1/248 (0%)
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+P Y +L+ A A+AR ++ L +++ E ++ + ++ A + G + + +
Sbjct: 176 RPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALA 235
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
++ +K + +PDI+ +N+ ID +GK D + F L KP ++ SMI
Sbjct: 236 LVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLC 295
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
KA G+AE +F +M A + P Y +I YG A ++ + L + G V
Sbjct: 296 KAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVV 355
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
+ N++L EA LFE P+SSTY ++ E ++L M
Sbjct: 356 SFNSILTCLGKKRKVDEALSLFE-VMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEM 414
Query: 457 EQNGIVPN 464
E + PN
Sbjct: 415 EHASLFPN 422
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 124/288 (43%), Gaps = 5/288 (1%)
Query: 157 KKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERC 216
K G+ +F ++R+ G PD Y+ LI H KA + F MK +
Sbjct: 540 KAGEVEKGRMIFEDIRSYGFLPDVRSYSILI----HGLTKAGQARETSNIFHAMK-QQGF 594
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
+ YN ++ ++ V + + +E+ E + P + TY ++D K + E
Sbjct: 595 ALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYM 654
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
+ KS + +++ ++ LID +GK D+ + + +M P + T+NS++
Sbjct: 655 LFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALV 714
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
KA +A FQ M MK P+ TY +I ++A + ++ K G V
Sbjct: 715 KAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVV 774
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
T M+ G T+A LFE G PD++++ L + + AN
Sbjct: 775 TYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNAN 822
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 144/346 (41%), Gaps = 7/346 (2%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
LGK K + L +F M+K ++ Y+ +I ++ G+ A + EM ++ P
Sbjct: 364 LGKKRKVDEALSLFEVMKKDAE--PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFP 421
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
+ N ++ KA+ L +A F+ C P+ VTY L+ + VD+
Sbjct: 422 NLLTVNIMVDRLC----KARKLEEAYKIFES-ASQRGCNPDCVTYCSLIDGLGKKGQVDE 476
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
LF+++ ++ + Y ++ + +G ++ + + CKPD+ N +D
Sbjct: 477 AYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMD 536
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
K +K +F+ + P + +++ +I KA + +F M +
Sbjct: 537 CVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFAL 596
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
Y ++ + V +A EI +E+ + V+T A+++ EA +LF
Sbjct: 597 DARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLF 656
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
E + + G+ + Y L + K + +L+ M + G+ PN
Sbjct: 657 EEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPN 702
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/128 (20%), Positives = 51/128 (39%)
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVS 396
+AR A M +K+ P+F Y +I RA E+ ++ ++G ++ V
Sbjct: 156 RARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVH 215
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
++ A G +A L + + PD Y + + KA ++ K +
Sbjct: 216 LFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHEL 275
Query: 457 EQNGIVPN 464
+ G+ P+
Sbjct: 276 KAQGLKPD 283
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 166/379 (43%), Gaps = 31/379 (8%)
Query: 95 PLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAV 154
P++R K+ + + + FE LG S K TG Y+ LI
Sbjct: 736 PIIRHFCKHKEALAAHELVKKFENLGVSLK--------------------TGSYNALICG 775
Query: 155 MGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KG 212
+ + +A LFSEM+ GC PD Y+ ++ A K+ + L ++M KG
Sbjct: 776 LVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAM----GKSMRIEDMLKIQEEMHNKG 831
Query: 213 MERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIK 272
K VTYN ++ +++ +D+ L+ +L +P TY ++D K+G I+
Sbjct: 832 Y---KSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIE 888
Query: 273 EMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMI 332
+ E++ M C+P+ +N+L++ Y +K+ ++F+S++ P + ++ +I
Sbjct: 889 DAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVI 948
Query: 333 INY-GKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGK 391
RL Y F+++T M P ITY +I G + A +++++ K G
Sbjct: 949 DTLCADGRLNDGLSY-FKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGI 1007
Query: 392 DMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
+ T N+++ G EA ++E G P+ TY L + Y+ + E
Sbjct: 1008 APNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFA 1067
Query: 452 LLKRMEQNGIVPNKRFFLE 470
RM G PN +++
Sbjct: 1068 AYGRMIVGGCRPNSSTYMQ 1086
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 182/419 (43%), Gaps = 13/419 (3%)
Query: 52 RTRPRTGICCVWTRPRSKRGRKSEELESKELVRVLMRSFSDKEP-----LVRTLNKYVKV 106
R RP + C P R S ++ +V +L RS + +P L ++ + +V
Sbjct: 39 RRRPSSRAGCRQLAPPPCEERVSRPGDAGNVVHML-RSAAAADPEEALELFLSVARQPRV 97
Query: 107 VRS-EHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAM 165
V + E C + E + + +VF MQ+Q A+ G + + +G +G R A
Sbjct: 98 VHTTESCNYMLELMRAHGRVGDVAQVFDLMQRQ-IIKANVGTFCTVFGAVGVEGGLRSAP 156
Query: 166 WLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNI 225
M+ +G + YN LI + K+ +A+ ++ M + P + TY++
Sbjct: 157 VALPVMKEAGIVLNAYTYNGLI----YFLVKSGFDREAMDVYKAMAA-DGVVPTVRTYSV 211
Query: 226 LLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ 285
L+ A + R+ + V L E+ + P++Y+Y + G+ G ++E +L +M+
Sbjct: 212 LMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEG 271
Query: 286 CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE 345
CKPD++T +LI + VF + S +KP T+ +++ G +
Sbjct: 272 CKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVS 331
Query: 346 YVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
++ + A Y + ++Y + V A ++FDE+ + G + + N+++ +
Sbjct: 332 EIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGF 391
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A LF + + G TP+ T+ L + K+ K + M+ GIVP+
Sbjct: 392 LKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPD 450
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 149/338 (44%), Gaps = 6/338 (1%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ ++V++ M + YS L+ GK+ + L EM G RP+ Y
Sbjct: 189 EAMDVYKAMAAD-GVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSY--- 244
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
T + +A L +A +KM+ E CKP++VT +L++ A + +F ++
Sbjct: 245 -TICIRVLGQAGRLEEAYRILRKME-EEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKM 302
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
S PD TY ++D G +G + + + + +K++ +++++ +D+ +
Sbjct: 303 KASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRV 362
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
D+ VF + P ++NS+I + KA +A +F M TP+ T+
Sbjct: 363 DEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLF 422
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I +G +A + ++ + G V NA+L G A +F MG+
Sbjct: 423 INYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGI 482
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+PD+ TY ++ K +KA+ + K+ M +N P+
Sbjct: 483 SPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPD 520
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 168/395 (42%), Gaps = 41/395 (10%)
Query: 120 GKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPD 179
GKS + L+ L+ + M K + + D + ++ + K G+ +A +F E++ G PD
Sbjct: 427 GKSGESLKALKRYELM-KSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPD 485
Query: 180 PSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQV 239
Y +I KA +A+ F +M RC P+++ N L+ +A ++
Sbjct: 486 NITYTMMIKCC----SKASNADEAMKIFAEMI-ENRCAPDVLAMNSLIDMLYKAGRGNEA 540
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
+F EL E L P TYN ++ G+ G +KE+ +L M SN P+IIT+N ++D
Sbjct: 541 WKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDC 600
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKM-------- 351
K + + S+ + P L ++N+++ K +A ++F +M
Sbjct: 601 LCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKVLAPDY 660
Query: 352 -TAMKYTPSFI----TYECIITMYGYC----------------------DNVSRAREIFD 384
T PSF+ E + T+ Y D ++ E +
Sbjct: 661 ATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGTEKSIEFAE 720
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
++ G + L+ ++ +C + A L + N+GV+ + +Y L +
Sbjct: 721 NIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDED 780
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSL 479
+ ++ ++L M++ G P++ + L+ S+
Sbjct: 781 LIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSM 815
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 154/339 (45%), Gaps = 17/339 (5%)
Query: 118 ELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCR 177
++G+ D + L+VF M KQ+ I Y+ LI+ K + A+ LF+ M G
Sbjct: 358 QVGRVD---EALDVFDEM-KQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHG-- 411
Query: 178 PDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVD 237
P P+ Y ++ + H K+ KAL ++ MK + P++V N +L A+ +
Sbjct: 412 PTPNGYTHVLFINYHG--KSGESLKALKRYELMKS-KGIVPDVVAGNAVLYGLAKTGRLG 468
Query: 238 QVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLI 297
+F EL ++PD TY ++ K E + + M N+C PD++ N LI
Sbjct: 469 MAKRVFHELKAMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLI 528
Query: 298 DSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK-- 355
D K ++ ++F L +PT T+N+++ G+ +GK + V Q + M
Sbjct: 529 DMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGR---EGKVKEVMQLLEGMNSN 585
Query: 356 -YTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+ P+ ITY ++ V+ A ++ ++ G +S+ N ++ G EA
Sbjct: 586 SFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEA 645
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKAN-MKELVQKL 452
+F + + PD +T + ++ ++ MKE + +
Sbjct: 646 FWMFCQMKKV-LAPDYATVCTILPSFVRSGLMKEALHTV 683
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 132/387 (34%), Gaps = 75/387 (19%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ I V+G+ G+ A + +M GC+PD LI A LA A F
Sbjct: 244 YTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLI----QILCDAGRLADAKDVF 299
Query: 208 QKMKGMERCKPNIVTYNILLRACA-----------------------------------Q 232
KMK ++ KP+ VTY LL C Q
Sbjct: 300 WKMKASDQ-KPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQ 358
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK------------------------- 267
VD+ +F E+ + + P Y+YN ++ + K
Sbjct: 359 VGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYT 418
Query: 268 -------NGMIKEMESVLSR---MKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
+G E L R MKS PD++ N ++ K ++VF L
Sbjct: 419 HVLFINYHGKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELK 478
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
P T+ MI KA +A +F +M + P + +I M +
Sbjct: 479 AMGISPDNITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGN 538
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
A +IF EL ++ + T N +L G E L E ++ P+ TY +
Sbjct: 539 EAWKIFYELKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVL 598
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPN 464
K +L M NG +P+
Sbjct: 599 DCLCKNGEVNYALDMLYSMTMNGCMPD 625
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 74/370 (20%), Positives = 141/370 (38%), Gaps = 71/370 (19%)
Query: 142 IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN-------SGCRPDPS-VYNALITAHLHT 193
+ D Y+ ++ + K+G+ A W+F +M+ + C PS V + L+ LHT
Sbjct: 623 MPDLSSYNTVMYGLVKEGRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEALHT 682
Query: 194 -------------RDKAKALAKALGYFQKMKGMERC---KPNIVTYNILL---------R 228
R +L + + K G E+ NI + +LL R
Sbjct: 683 VREYILQPDSKVDRSSVHSLMEGI---LKRDGTEKSIEFAENIASSGLLLDDLFLSPIIR 739
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
+ + + L K+ ++ +YN ++ +I E + S MK C P
Sbjct: 740 HFCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDP 799
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
D T++L++D+ GK + M ++ + MH+K
Sbjct: 800 DEFTYHLILDAMGKSMRIEDMLKI-QEEMHNK---------------------------- 830
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
Y +++TY II+ + A ++ +L G T +L+ +
Sbjct: 831 ------GYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKD 884
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G +A+ LF+ G P+ + Y +L Y A E V +L + M + G+ P+ + +
Sbjct: 885 GNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSY 944
Query: 469 LEALETFSSS 478
++T +
Sbjct: 945 TVVIDTLCAD 954
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 102/254 (40%), Gaps = 11/254 (4%)
Query: 226 LLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQ 285
L+RA + +V QV F + I+ ++ T+ V A G G ++ L MK
Sbjct: 110 LMRAHGRVGDVAQV---FDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAG 166
Query: 286 CKPDIITFN----LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
+ T+N L+ S R+A D V+K++ PT+ T++ +++ +GK R
Sbjct: 167 IVLNAYTYNGLIYFLVKSGFDREAMD----VYKAMAADGVVPTVRTYSVLMLAFGKRRDA 222
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
+ +M A P+ +Y I + G + A I ++ + G V T +
Sbjct: 223 ETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVL 282
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
++ C G +A +F PD TY L + V ++ ++ +G
Sbjct: 283 IQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGY 342
Query: 462 VPNKRFFLEALETF 475
N + A++
Sbjct: 343 NDNVVSYTAAVDAL 356
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 153/358 (42%), Gaps = 15/358 (4%)
Query: 134 WMQKQRWYIADTGIYSKLIAVMGKK----GQTRLAMWLFSEMRNSGCRPDPSVYNALITA 189
W R G K A++ ++ G+ A+ LF M GC D + +N +
Sbjct: 111 WSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTI--- 167
Query: 190 HLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHES 249
L K+K + KA F+ ++G R + VTYN++L + + + KE+ E
Sbjct: 168 -LDVLCKSKRVEKAYELFRALRG--RFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVER 224
Query: 250 ILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKM 309
+ P++ TYN ++ + + G I+ MK C+ D++T+ ++ +G +
Sbjct: 225 GINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRA 284
Query: 310 EQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITM 369
VF ++ P++ T+N+MI K A +F++M Y P+ TY +I
Sbjct: 285 RNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRG 344
Query: 370 YGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPD 429
+ SR E+ + G + T N M+ Y +A LFE + P+
Sbjct: 345 LFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPN 404
Query: 430 SSTYKLLYKA-YTKANMKELV--QKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQS 484
TY +L + + +++V KLL M + G +P K F L L G+Q+
Sbjct: 405 LDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGL--LLTGNQA 460
>gi|410110137|gb|AFV61148.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rubella]
Length = 440
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 142/302 (47%), Gaps = 5/302 (1%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
LF EMR PD Y+ LIT H K AL + QKM+ +R ++V Y+ L
Sbjct: 2 LFDEMRQRALSPDRYTYSTLIT-HF---GKEGLFDAALSWLQKME-QDRVPGDLVLYSNL 56
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+ + + + ++F L S PD+ YN +++ +GK + +E S++S MK+
Sbjct: 57 IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGV 116
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
P+ +++ L+ Y + + F + VF + K L T N MI YG+ + +A+
Sbjct: 117 MPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLSMAKEADK 176
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+F M M PS +++ ++ +YG + A +F + + + V T N+M+ Y
Sbjct: 177 LFWGMRKMGIEPSVVSFNTLLRVYGDAELFGEAIHLFRLMQRKNIEQTVVTYNSMIMIYG 236
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
+A+ L + + G+ P+S TY + + K + L +++ +G+ ++
Sbjct: 237 KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 296
Query: 467 FF 468
F
Sbjct: 297 LF 298
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 155/327 (47%), Gaps = 5/327 (1%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
+QR D YS LI GK+G A+ +M D +Y+ LI D
Sbjct: 7 RQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 66
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+KA++ F ++K P++V YN ++ +A+ + +L E+ + + P+
Sbjct: 67 SKAIS----IFSRLK-RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTT 121
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+Y+ ++ Y +N E SV S M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 122 SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLSMAKEADKLFWGM 181
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P++ +FN+++ YG A L G+A ++F+ M + +TY +I +YG
Sbjct: 182 RKMGIEPSVVSFNTLLRVYGDAELFGEAIHLFRLMQRKNIEQTVVTYNSMIMIYGKTLEH 241
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A + E+ G + T + ++ + G A +LF+ + GV D ++ +
Sbjct: 242 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTM 301
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVP 463
AY +A + ++LL +++ +P
Sbjct: 302 IVAYERAGLVAHAKRLLHELKRPDNIP 328
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 148/360 (41%), Gaps = 42/360 (11%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L SEM+ +G P+ + Y+ L+T ++
Sbjct: 77 KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVEN--- 133
Query: 197 AKALAKALGYFQKMK--------------------------------GMER--CKPNIVT 222
K +AL F +M+ GM + +P++V+
Sbjct: 134 -KKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLSMAKEADKLFWGMRKMGIEPSVVS 192
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
+N LLR A + LF+ + + + TYN ++ YGK ++ +++ M+
Sbjct: 193 FNTLLRVYGDAELFGEAIHLFRLMQRKNIEQTVVTYNSMIMIYGKTLEHEKANNLIQEMQ 252
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
S +P+ IT++ +I +GK D+ +F+ L S + F +MI+ Y +A L
Sbjct: 253 SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVA 312
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
A+ + ++ P I + I + + A +F + G+ ++ M+
Sbjct: 313 HAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFERMI 368
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIV 462
+ +F+ +G PDS+ ++ AY K + + M++ G V
Sbjct: 369 HLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQEVGCV 428
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 110/259 (42%), Gaps = 35/259 (13%)
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGM-------IKEME------------------ 275
LF E+ + L+PD YTY+ ++ +GK G+ +++ME
Sbjct: 1 GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELS 60
Query: 276 ----------SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
S+ SR+K + PD++ +N +I+ +GK + F + + + + P
Sbjct: 61 RKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNT 120
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
++++++ Y + + +A VF +M +K T +I +YG A ++F
Sbjct: 121 TSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLSMAKEADKLFWG 180
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ K+G + V + N +L Y L EA LF + TY + Y K
Sbjct: 181 MRKMGIEPSVVSFNTLLRVYGDAELFGEAIHLFRLMQRKNIEQTVVTYNSMIMIYGKTLE 240
Query: 446 KELVQKLLKRMEQNGIVPN 464
E L++ M+ GI PN
Sbjct: 241 HEKANNLIQEMQSRGIEPN 259
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 140/321 (43%), Gaps = 5/321 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ ++ + K + + A+ L ++ +GC P + YNAL L+ K L +A
Sbjct: 33 DIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNAL----LNGLCKMGRLEEA 88
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ +K+ C P++VTY L+ + + + LFKE+ LA D Y ++
Sbjct: 89 IDLLRKIVD-NGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIR 147
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ G I + SV M S C PD++T + +ID K ++FKS+ P
Sbjct: 148 GLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAP 207
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
++++I KAR A + +M TP ITY +I +V+ AR F
Sbjct: 208 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFF 267
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
DE+ + G V T N ++ +C G A +F++ + +P+ TY L K
Sbjct: 268 DEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKR 327
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+ M++ G P+
Sbjct: 328 RQLTKASLYYQHMKERGCPPD 348
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 146/320 (45%), Gaps = 10/320 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ LI +GKK ++ A LF EM + G D Y ALI L +A + +A
Sbjct: 103 DVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLL----QAGKIPQA 158
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
++ M + C P++VT + ++ +A + +FK + LAP+ Y+ ++
Sbjct: 159 SSVYKTMTS-QGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIH 217
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K + +L++MK C PD IT+N+LID K F ++ + KP
Sbjct: 218 GLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKP 277
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRARE 381
+ T+N +I + KA A VF M++ + +P+ +TY +I+ G C +++A
Sbjct: 278 DVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLIS--GLCKRRQLTKASL 335
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
+ + + G +++++ C +G +LF+ GV + +L++
Sbjct: 336 YYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFH-LC 394
Query: 442 KANMKELVQKLLKRMEQNGI 461
KAN + L + + G+
Sbjct: 395 KANRVDEAVSLFNAIRKEGM 414
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 115/241 (47%), Gaps = 14/241 (5%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L ++ K Q V++ M Q + D S +I + K G+ A+ +F M
Sbjct: 145 LIRGLLQAGKIPQASSVYKTMTSQGC-VPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEAR 203
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P+ VY+ALI H KA+ + AL +MK C P+ +TYNIL+ ++
Sbjct: 204 GLAPNEVVYSALI----HGLCKARKMDCALEMLAQMK-KAFCTPDTITYNILIDGLCKSG 258
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+V A F E+ E+ PD+YTYN ++ + K G V M S++C P+++T+
Sbjct: 259 DVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYG 318
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP---TFNSMIINYGK-ARLQGKAEYVFQK 350
LI KR+ K ++ H KE+ P ++S++ K +L+G +F +
Sbjct: 319 TLISGLCKRRQLTKASLYYQ---HMKERGCPPDSFVYSSLVDGLCKSGKLEGGC-MLFDE 374
Query: 351 M 351
M
Sbjct: 375 M 375
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 134/316 (42%), Gaps = 9/316 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L+ + K G+ A+ L ++ ++GC PD Y +LI K K +A F
Sbjct: 72 YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDG----LGKKKRSFEAYKLF 127
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
++M +G+ + V Y L+R QA + Q ++++K + PD+ T + ++D
Sbjct: 128 KEMASRGLAL---DTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGL 184
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G I + M++ P+ + ++ LI K + D ++ + + P
Sbjct: 185 CKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 244
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+N +I K+ A F +M P TY +I+ + N A +FD+
Sbjct: 245 ITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDD 304
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+S V T ++ C T+A L +++ G PDS Y L K+
Sbjct: 305 MSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGK 364
Query: 446 KELVQKLLKRMEQNGI 461
E L ME++G+
Sbjct: 365 LEGGCMLFDEMERSGV 380
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 119/286 (41%), Gaps = 39/286 (13%)
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
C +I TY ++ A+ + + + AL +++ + P I TYN +++ K G ++E
Sbjct: 30 CTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAI 89
Query: 276 SVLSRMKSNQCKPDIITFNLLIDSYGKRQ-----------------AFD----------- 307
+L ++ N C PD++T+ LID GK++ A D
Sbjct: 90 DLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGL 149
Query: 308 ----KMEQ---VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSF 360
K+ Q V+K++ P + T ++MI KA G A +F+ M A P+
Sbjct: 150 LQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNE 209
Query: 361 ITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+ Y +I +G C + A E+ ++ K T N +++ C +G A F
Sbjct: 210 VVYSALI--HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFF 267
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ G PD TY +L + KA + + M + PN
Sbjct: 268 DEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPN 313
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 115/243 (47%)
Query: 222 TYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRM 281
T++IL+ +A + Q ++L +E + DI+TY ++D KN I+E +++ ++
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 282 KSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQ 341
+N C P I T+N L++ K ++ + + ++ + P + T+ S+I GK +
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 342 GKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAM 401
+A +F++M + + Y +I + +A ++ ++ G V TL+ M
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180
Query: 402 LEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
++ C G A +F++ G+ P+ Y L KA + ++L +M++
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240
Query: 462 VPN 464
P+
Sbjct: 241 TPD 243
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 110/244 (45%), Gaps = 22/244 (9%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L L K+ K LE+ M+K + DT Y+ LI + K G A F EM +
Sbjct: 215 LIHGLCKARKMDCALEMLAQMKKA-FCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEA 273
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC+PD YN LI+ KA A G F M RC PN+VTY L+ + R
Sbjct: 274 GCKPDVYTYNILISGFC----KAGNTDAACGVFDDMSS-SRCSPNVVTYGTLISGLCKRR 328
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG-------MIKEMESVLSRMKSNQCK 287
+ + + ++ + E PD + Y+ ++D K+G + EME S + ++Q +
Sbjct: 329 QLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMER--SGVANSQTR 386
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
+I F+L K D+ +F ++ + P +NS+I K+ + + V
Sbjct: 387 TRLI-FHLC-----KANRVDEAVSLFNAI-RKEGMPHPYAYNSIISALIKSGKVNEGQAV 439
Query: 348 FQKM 351
+Q+M
Sbjct: 440 YQEM 443
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 146/325 (44%), Gaps = 5/325 (1%)
Query: 151 LIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM 210
L A + K A +F EM S P+ YN LI A L AL +F +M
Sbjct: 176 LDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFC----LAGNLDVALRFFDRM 231
Query: 211 KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGM 270
+ + C PN+VTYN L+ + R +D L + + L P++ +YN V++ + G
Sbjct: 232 EK-KGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
+KE+ VL+ M D +T+N LI Y K F + + ++ P++ T+ S
Sbjct: 291 MKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTS 350
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
+I + KA +A +M P+ TY ++ + ++ A + E+ G
Sbjct: 351 LIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNG 410
Query: 391 KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQ 450
V T NA++ +C+ G +A + E+ G+TPD +Y + + ++ +
Sbjct: 411 FSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 451 KLLKRMEQNGIVPNKRFFLEALETF 475
++ ++M GI P+ + ++ F
Sbjct: 471 RVKRKMVAKGIKPDTITYSSLIQGF 495
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/407 (19%), Positives = 172/407 (42%), Gaps = 55/407 (13%)
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+R Y D Y+ LI K+G A+ + +EM G P Y +LI H+ KA
Sbjct: 303 KRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLI----HSMCKA 358
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYT 257
+ +A + +M+ C PN TY L+ +Q +++ + KE+ ++ +P + T
Sbjct: 359 GNMNRATEFLDQMRVRGLC-PNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVT 417
Query: 258 YNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
YN +++ + G + + +VL MK PD+++++ ++ + + D+ +V + ++
Sbjct: 418 YNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMV 477
Query: 318 HSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS 377
KP T++S+I + + R +A +F +M + P TY +I Y ++
Sbjct: 478 AKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQ 537
Query: 378 RAREIFDELSKLG----------------------------------------------- 390
+A ++ +E+ + G
Sbjct: 538 KAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLI 597
Query: 391 ---KDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+++ ++ ++++ +CM G+ TEAD +FE+ PD + Y ++ + +
Sbjct: 598 ENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIR 657
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTRS 494
L K M ++G + + + ++T ++ S ++ RS
Sbjct: 658 KAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRS 704
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 160/357 (44%), Gaps = 50/357 (14%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR--DKAKALAKALG 205
Y+ LI G +A+ F M GC P+ YN LI + R D L +++
Sbjct: 208 YNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMA 267
Query: 206 YFQKMKGMERCKPNIVTYNILLRA-CAQAR----------------NVDQV--NALFK-- 244
+KG+E PN+++YN+++ C + R ++D+V N L K
Sbjct: 268 ----LKGLE---PNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGY 320
Query: 245 ----ELHESI----------LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
H+++ L+P + TY ++ + K G + L +M+ P+
Sbjct: 321 CKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNE 380
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
T+ L+D + ++ ++ +V K ++ + P++ T+N++I + A A V +
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLED 440
Query: 351 MTAMKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
M TP ++Y +++ G+C +V A + ++ G T +++++ +C
Sbjct: 441 MKEKGLTPDVVSYSTVLS--GFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQ 498
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT-KANMKELVQKLLKRMEQNGIVPN 464
EA LF+ +G+ PD TY L AY + ++++ +Q L M + G++P+
Sbjct: 499 RRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQ-LHNEMVEKGVLPD 554
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 102/228 (44%), Gaps = 7/228 (3%)
Query: 253 PDIYTYNGVMDAYGKNGM-IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
P + +YN V+DA ++ I E+V M +Q P++ T+N+LI + D +
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALR 226
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
F + P + T+N++I Y K R + + M P+ I+Y +I G
Sbjct: 227 FFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVIN--G 284
Query: 372 YCDNVSRAREI---FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
C R +EI E++K G + T N +++ YC G +A ++ G++P
Sbjct: 285 LCRE-GRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSP 343
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
TY L + KA + L +M G+ PN+R + ++ FS
Sbjct: 344 SVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFS 391
>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 532
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 136/301 (45%), Gaps = 4/301 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
+T ++ LI + + G+ LF+ M++ GC PD YN LI+ KA L +A
Sbjct: 197 NTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLC----KANELDRA 252
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
++++ C P+++TY ++ + ++ + LF+E+ S + P + T+N ++D
Sbjct: 253 CDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLID 312
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+GK G + E++ +M S C PD++TF LID Y + +V+ + P
Sbjct: 313 GFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSP 372
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
+ T++ +I K +A + +++ P Y +I + NV A I
Sbjct: 373 NIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIV 432
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
E+ + T ++ +CM G EA +F+ +G PD+ T L KA
Sbjct: 433 TEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAPDNITISSLVACLLKA 492
Query: 444 N 444
Sbjct: 493 G 493
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 169/401 (42%), Gaps = 25/401 (6%)
Query: 111 HCFLLFEELGKSDKWL---QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWL 167
HCF +E L +S + +E+ + ++ D+ + L+ + G+ LA L
Sbjct: 91 HCFSTYELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKL 150
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
E++ R VYN L L+ K + +A+ F++ PN T+NIL+
Sbjct: 151 IIEVQGEEARISSFVYNYL----LNELVKGGKVHEAIFLFKENLAFHS-PPNTWTFNILI 205
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS-NQC 286
R + V++ LF + PD+ TYN ++ K + +L ++S N C
Sbjct: 206 RGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDC 265
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
PD++T+ +I + K + +F+ ++ S +PT+ TFN +I +GK AE
Sbjct: 266 SPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEA 325
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+ +KM + P +T+ +I Y ++ +++D + + T + ++ A C
Sbjct: 326 MHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALC 385
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
+ EA L V P Y + + KA + ++ ME+ P+K
Sbjct: 386 KDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKV 445
Query: 467 FF-------------LEALETFSSSLAGSQSGSAKTDLTRS 494
F +EAL+ F LA G A ++T S
Sbjct: 446 TFTILIIGHCMKGRMVEALDIFKKMLA---IGCAPDNITIS 483
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 134/291 (46%), Gaps = 15/291 (5%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN-SGCRPDPSVYNALI 187
E+F MQ + D Y+ LI+ + K + A L E+++ + C PD Y ++I
Sbjct: 218 FELFNAMQ-SFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSII 276
Query: 188 TAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKE 245
+ K L A F++M G+E P +VT+N+L+ + N+ A+ ++
Sbjct: 277 SGF----RKLGKLEAASVLFEEMIRSGIE---PTVVTFNVLIDGFGKIGNMVAAEAMHEK 329
Query: 246 LHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQA 305
+ PD+ T+ ++D Y + G I+ V MK+ P+I T++++I++ K
Sbjct: 330 MASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNR 389
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
+ + + L S P +N +I + KA +A + +M + P +T+
Sbjct: 390 IHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFT- 448
Query: 366 IITMYGYC--DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
I + G+C + A +IF ++ +G T+++++ G P+EA
Sbjct: 449 -ILIIGHCMKGRMVEALDIFKKMLAIGCAPDNITISSLVACLLKAGKPSEA 498
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 5/202 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ LI GK G A + +M + C PD + +LI + T D + L +
Sbjct: 307 FNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGD----IRLGLKVW 362
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
MK PNI TY++++ A + + + L ++L S + P + YN V+D + K
Sbjct: 363 DVMKA-RNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCK 421
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G + E +++ M+ +C+PD +TF +LI + + + +FK ++ P T
Sbjct: 422 AGNVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAPDNIT 481
Query: 328 FNSMIINYGKARLQGKAEYVFQ 349
+S++ KA +A ++ Q
Sbjct: 482 ISSLVACLLKAGKPSEAFHIVQ 503
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 147/334 (44%), Gaps = 11/334 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ LI + KG A+ L + +G R D Y LI K ++A+G+
Sbjct: 149 FTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLC----KMGKTSEAVGWL 204
Query: 208 QKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYG 266
+KM+ ER PN+V Y+ ++ + V + L E+ + P++ TY ++
Sbjct: 205 RKME--ERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLC 262
Query: 267 KNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLP 326
G KE S+L M PD+ + N+L+D K + + V ++ E P +
Sbjct: 263 NFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVF 322
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFD 384
T+NS+I Y +A VF+ M + P + Y +I +G+C N+++A + D
Sbjct: 323 TYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLI--HGWCKIKNINKAMHLLD 380
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
E+ K+G V T ++ +C G P A LF N H G P+ T ++ K+
Sbjct: 381 EMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQ 440
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ L ME++ + N + L+ S+
Sbjct: 441 LLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSA 474
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 154/359 (42%), Gaps = 40/359 (11%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
Y +D Y LI + K G+T A+ +M P+ VY+ ++ K +
Sbjct: 177 YRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLC----KDGLV 232
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
++ALG +M G + KPN+VTY L++ + +L E+ + + PD+ + N
Sbjct: 233 SEALGLCLEMSG-KGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNI 291
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++D K G I + +SV+ M PD+ T+N LID Y + D+ +VF+ ++
Sbjct: 292 LVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRG 351
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY----------------- 363
P + + S+I + K + KA ++ +M + +TP +T+
Sbjct: 352 CLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAK 411
Query: 364 ----------------ECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
C I + G C + +S A +F + K D+ + + +L+
Sbjct: 412 ELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGM 471
Query: 406 CMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
C G A LF G+ + Y ++ + K + + + LL ME+NG +P+
Sbjct: 472 CSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPD 530
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 138/363 (38%), Gaps = 45/363 (12%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L L K K + + R M+++ W + +YS ++ + K G A+ L EM
Sbjct: 186 VLINGLCKMGKTSEAVGWLRKMEERNWN-PNVVVYSTVMDGLCKDGLVSEALGLCLEMSG 244
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
G +P+ Y LI L + K L KM M P++ + NIL+ +
Sbjct: 245 KGIKPNLVTYTCLIQG-LCNFGRWKEAGSLLDEMMKMGVM----PDLQSLNILVDVLCKE 299
Query: 234 RNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITF 293
+ Q ++ + PD++TYN ++D Y + E V M S C PDI+ +
Sbjct: 300 GKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAY 359
Query: 294 NLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTA 353
LI + K + +K + ++ P + T+ ++I + + A+ +F M
Sbjct: 360 TSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHK 419
Query: 354 MKYTPSFITYECIITMYGYCDN-------------------------------------V 376
P+ T C I + G C + +
Sbjct: 420 YGQVPNLQT--CAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKL 477
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+ A E+F L G + V M+ + GL +A+ L N G PDS TY +
Sbjct: 478 NTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVF 537
Query: 437 YKA 439
+
Sbjct: 538 VQG 540
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 119/272 (43%), Gaps = 6/272 (2%)
Query: 196 KAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESI-LAPD 254
K K++ +AL +F M M P+++ + +LL + ++ +L KE+H S+ + PD
Sbjct: 52 KLKSIDEALNFFHTMAKMNPL-PSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPD 110
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
+ N V+++ ++ SVL M +P ++TF +LI+ + + ++
Sbjct: 111 TFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVD 170
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
+ + + + T+ +I K +A +KM + P+ + Y + M G C
Sbjct: 171 HVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTV--MDGLCK 228
Query: 375 N--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
+ VS A + E+S G + T +++ C G EA L + MGV PD +
Sbjct: 229 DGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQS 288
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+L K + ++ M G VP+
Sbjct: 289 LNILVDVLCKEGKIMQAKSVIGFMILVGEVPD 320
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 6/195 (3%)
Query: 141 YIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKAL 200
+ D ++ LI + G+ A LF M G P+ A+I L K++ L
Sbjct: 387 FTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTC-AII---LDGLCKSQLL 442
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
++AL F M+ NIV Y+I+L A ++ LF L L ++Y Y
Sbjct: 443 SEALSLFHAMEK-SNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTI 501
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
+++ + K G++ + E +LS M+ N C PD T+N+ + + + + + ++M K
Sbjct: 502 MINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIK-YLTMMRDK 560
Query: 321 EKPTLPTFNSMIINY 335
T MIINY
Sbjct: 561 GFSVDATTTEMIINY 575
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 76/205 (37%), Gaps = 10/205 (4%)
Query: 267 KNGMIKEMESVLS---RMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE-- 321
K+G +K ++ L+ M P +I F LL+ K + + + K MHS
Sbjct: 49 KSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKE-MHSSLGI 107
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRA 379
KP N +I + +L V M + PS +T+ +I G C +V RA
Sbjct: 108 KPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILIN--GLCVKGDVGRA 165
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
E+ D + K G V T ++ C G +EA P+ Y +
Sbjct: 166 VELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDG 225
Query: 440 YTKANMKELVQKLLKRMEQNGIVPN 464
K + L M GI PN
Sbjct: 226 LCKDGLVSEALGLCLEMSGKGIKPN 250
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 15/153 (9%)
Query: 88 RSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGI 147
R + KE L ++KY +V + C ++ + L KS + L +F M+K + + I
Sbjct: 406 RPLAAKE-LFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDL-NIVI 463
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT--AHLHTRDKAKALAKALG 205
YS ++ M G+ A+ LFS + G + + Y +I A DKA+ L
Sbjct: 464 YSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDL----- 518
Query: 206 YFQKMKGMER--CKPNIVTYNILLRACAQARNV 236
+ ME C P+ TYN+ ++ R +
Sbjct: 519 ----LSNMEENGCMPDSCTYNVFVQGLVAEREI 547
>gi|125560423|gb|EAZ05871.1| hypothetical protein OsI_28108 [Oryza sativa Indica Group]
Length = 608
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 171/394 (43%), Gaps = 22/394 (5%)
Query: 78 ESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQK 137
ES V +L S KEPL R V+ + + F++L KW E+ W++
Sbjct: 86 ESGSAVSILKTQRSKKEPLPRD-----AVLGT---LMRFKQL---KKWNLVSEILEWLRT 134
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
Q W+ + L+ GK G A + M G +P AL+ A+ +A
Sbjct: 135 QHWWNFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAY----GRA 190
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL---HESILAPD 254
K KA F++M+ +P+ VTY I+L++ + + A+F++L + PD
Sbjct: 191 KQYRKAEAVFRRMQ-TSGPEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPD 249
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
++ ++ Y K G + + ++M +TFN L+ + ++ ++
Sbjct: 250 QKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMSF---ETDYKEVSNIYD 306
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
+ + KP + +++ +I YGKAR + +A VF++M P+ +Y +I +
Sbjct: 307 QMQRTALKPDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISG 366
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
V A +F + + + + + M+ AY A+ F G+ P+ Y
Sbjct: 367 LVEEAHTVFKAMRRHRVEPDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYG 426
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
L K Y+K N E V ++ +RM G+ PN+ +
Sbjct: 427 TLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIY 460
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 154/330 (46%), Gaps = 21/330 (6%)
Query: 114 LLFEELGKSDKWLQCLEVFRWM--QKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM 171
++ + + DK+ + +F + +K+ + D ++ +I + K G A LF++M
Sbjct: 217 IILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDYAQARKLFAQM 276
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERC--KPNIVTYNILLRA 229
G +N+L++ ++ + Y Q M+R KP++V+Y++L++A
Sbjct: 277 SERGIPLSTVTFNSLMSFETDYKEVSNI------YDQ----MQRTALKPDVVSYSLLIKA 326
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
+AR ++ A+F+E+ ++ + P +YN ++DA+ +G+++E +V M+ ++ +PD
Sbjct: 327 YGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRVEPD 386
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
+ ++ ++ +Y D E+ F+ + KP + + +++ Y K + V++
Sbjct: 387 LCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNVERVMRVYE 446
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
+M P+ Y I+ ++G + A F E+ G N +L +
Sbjct: 447 RMRMQGVEPNQTIYTTIMDVHGRNSDFGNAVIWFKEMEARGYPADKKAKNILL---SLAK 503
Query: 410 LPTEADLLFENSHNMGVT----PDSSTYKL 435
P E + E + N + PD +TY L
Sbjct: 504 TPEEQEEANELTGNCAIQLEAKPDGTTYGL 533
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 165/356 (46%), Gaps = 22/356 (6%)
Query: 89 SFSDKEPLVRTLNK--YVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTG 146
FS E +++ +NK Y V S+ L E G++ ++ + VFR MQ +
Sbjct: 157 DFSRAERVLKYMNKKGYKPSVISQTA--LMEAYGRAKQYRKAEAVFRRMQTSG--PEPSA 212
Query: 147 IYSKLIA---VMGKKGQTRLAMW--LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ ++I V G K + A++ L +E R S +PD +++ +I + KA A
Sbjct: 213 VTYQIILKSFVEGDKYKEAEAIFEDLLNEKRAS-FKPDQKMFHMMIYMY----KKAGDYA 267
Query: 202 KALGYFQKMKGMERCKP-NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+A F +M ER P + VT+N L+ + + +V+ ++ ++ + L PD+ +Y+
Sbjct: 268 QARKLFAQMS--ERGIPLSTVTFNSLM---SFETDYKEVSNIYDQMQRTALKPDVVSYSL 322
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ AYGK +E +V M +P ++N+LID++ ++ VFK++ +
Sbjct: 323 LIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHR 382
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P L ++ +M++ Y A AE F+++ P+ + Y ++ Y +NV R
Sbjct: 383 VEPDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNVERVM 442
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+++ + G + + +++ + N A + F+ G D +L
Sbjct: 443 RVYERMRMQGVEPNQTIYTTIMDVHGRNSDFGNAVIWFKEMEARGYPADKKAKNIL 498
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 108/221 (48%), Gaps = 6/221 (2%)
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ AYGK G E VL M KP +I+ L+++YG+ + + K E VF+ + S
Sbjct: 148 LVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAVFRRMQTSG 207
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECIITMYGYCDNVS 377
+P+ T+ ++ ++ + +AE +F+ + K + P + +I MY + +
Sbjct: 208 PEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDYA 267
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
+AR++F ++S+ G + T N+++ E +++ + PD +Y LL
Sbjct: 268 QARKLFAQMSERGIPLSTVTFNSLM---SFETDYKEVSNIYDQMQRTALKPDVVSYSLLI 324
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
KAY KA +E + + M G+ P ++ + ++ F+ S
Sbjct: 325 KAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAIS 365
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 137/315 (43%), Gaps = 7/315 (2%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
IY+ LI ++G+ + A+ + M G +PD YN++I K++ + +A Y
Sbjct: 483 IYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLC----KSRKMEEAKDY 538
Query: 207 FQKMKGMER-CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+M +ER KPN+ TY L+ ++ + + FKE+ +AP+ ++D Y
Sbjct: 539 LVEM--IERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGY 596
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
K G E S+ M PD+ T++ LI + ++ + P +
Sbjct: 597 CKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDV 656
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
T+NS+I + K GKA + + M +P+ ITY +I + RARE+FD
Sbjct: 657 FTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDG 716
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ G T +++ YC +G ++A LF+ GV PDS Y L K
Sbjct: 717 IPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGN 776
Query: 446 KELVQKLLKRMEQNG 460
E L Q G
Sbjct: 777 TEKALSLFLESVQKG 791
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 164/397 (41%), Gaps = 44/397 (11%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ E+ + M K + +AD YS LI GK+ + A + EM + G +P Y AL
Sbjct: 289 EAFELKKLMDK-KGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTAL 347
Query: 187 ITAHLHTRDKAKA---------------------LAKALGYFQKMKG---------MERC 216
I + D +A L K + F M+ M
Sbjct: 348 IDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGI 407
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
KP+ TYN ++ + +N +V L E+ +S L P YT +++ ++G I++
Sbjct: 408 KPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASR 467
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
V M S KP+ + + LI + + F + ++ K + +P + +NS+II
Sbjct: 468 VFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLC 527
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMK 394
K+R +A+ +M P+ TY +I +GYC + + A F E+ G
Sbjct: 528 KSRKMEEAKDYLVEMIERGLKPNVYTYGALI--HGYCKSGEMQVADRYFKEMLGCGIAPN 585
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
A+++ YC G TEA +F V PD TY L + + +LL
Sbjct: 586 DVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLS 645
Query: 455 RMEQNGIVPNKRFFLEALETFSSSLAG--SQSGSAKT 489
+ G+VP+ + T++S ++G Q G K
Sbjct: 646 EFLEKGLVPD-------VFTYNSIISGFCKQGGIGKA 675
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 152/333 (45%), Gaps = 5/333 (1%)
Query: 132 FRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHL 191
F K+ ++ + L++ + K + L ++ M + D Y LI AH
Sbjct: 188 FFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHF 247
Query: 192 HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESIL 251
+ + K L + + KG C P++VTYN+++ +A VD+ L K + + L
Sbjct: 248 RAGNAKEG--KRLLFEMEEKG---CSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGL 302
Query: 252 APDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQ 311
D++TY+ ++D +GK E + +L M S KP + + LID + ++ + +
Sbjct: 303 VADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFR 362
Query: 312 VFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
V + ++ K L T+N+++ K KA+ + +M + P TY +I Y
Sbjct: 363 VKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYL 422
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
N SR +++ E+ K T ++ C +G +A +FE ++GV P++
Sbjct: 423 KEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAV 482
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
Y L K + + + ++LK M++ G+ P+
Sbjct: 483 IYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPD 515
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 168/395 (42%), Gaps = 42/395 (10%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
++ + + + + M K + D Y+ +I + K + A EM G +P+ Y
Sbjct: 496 RFQEAVRILKVMDK-KGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTY 554
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
ALI H K+ + A YF++M G PN V L+ + + + ++F
Sbjct: 555 GALI----HGYCKSGEMQVADRYFKEMLGC-GIAPNDVVCTALIDGYCKEGSTTEATSIF 609
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR 303
+ + + PD+ TY+ ++ +NG ++ +LS PD+ T+N +I + K+
Sbjct: 610 RCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQ 669
Query: 304 QAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITY 363
K Q+ + + P + T+N++I KA +A +F + + +TY
Sbjct: 670 GGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTY 729
Query: 364 ECIITMYGYCDNVSRAREIFDELS-------------------KLGKDMKV--------- 395
II Y N+S+A +FDE++ K G K
Sbjct: 730 ATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQ 789
Query: 396 ------STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELV 449
S+LNA+++ +C +G EA+ L E+ + V PD TY +L + K +
Sbjct: 790 KGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEA 849
Query: 450 QKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQS 484
++ M++ ++PN + L + ++AG +S
Sbjct: 850 EQFFVDMQKRNLMPNALTYTALLSGY--NMAGRRS 882
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 143/330 (43%), Gaps = 12/330 (3%)
Query: 141 YIADTGI------YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTR 194
Y+ GI Y+ LI + K G+ A LF + G + Y +I +
Sbjct: 681 YMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYC--- 737
Query: 195 DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPD 254
K+ L+KA F +M ++ P+ Y+ L+ C + N ++ +LF E + A
Sbjct: 738 -KSGNLSKAFRLFDEMT-LKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFAS- 794
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
+ N +MD + K+G + E +L M KPD +T+ +LID + K + EQ F
Sbjct: 795 TSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFV 854
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
+ P T+ +++ Y A + + +F +M A P +T+ +I +
Sbjct: 855 DMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEG 914
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
+ + ++ D++ K G ++ + + +++ C +E + E G+ +T
Sbjct: 915 DHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCS 974
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
L + + KA + ++LK M + VP+
Sbjct: 975 TLVRCFHKAGKMDGAARVLKSMVRFKWVPD 1004
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 142/364 (39%), Gaps = 36/364 (9%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK--------- 198
Y+ L+ + K G A L +EM G +PD YN +I +L ++ ++
Sbjct: 379 YNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMK 438
Query: 199 ----------------------ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
++ A F+ M + KPN V Y L++ Q
Sbjct: 439 KSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSL-GVKPNAVIYTTLIKGHVQEGRF 497
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
+ + K + + + PD+ YN V+ K+ ++E + L M KP++ T+ L
Sbjct: 498 QEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGAL 557
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
I Y K ++ FK ++ P ++I Y K +A +F+ M
Sbjct: 558 IHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSV 617
Query: 357 TPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P TY +I +G N + A E+ E + G V T N+++ +C G +A
Sbjct: 618 HPDVRTYSALI--HGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKA 675
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALET 474
L E G++P+ TY L KA E ++L + G+ N + ++
Sbjct: 676 FQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDG 735
Query: 475 FSSS 478
+ S
Sbjct: 736 YCKS 739
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 72/182 (39%)
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++D Y K G+ E S K N ++ N L+ K + + + ++ +
Sbjct: 172 LIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEAN 231
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+ T+ +I + +A + + + +M +PS +TY +I V A
Sbjct: 232 VLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAF 291
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
E+ + K G V T + +++ + TEA L+ E + G+ P Y L +
Sbjct: 292 ELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGF 351
Query: 441 TK 442
+
Sbjct: 352 MR 353
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 67/185 (36%)
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQK 350
+ F LLID Y K+ FD+ F + L N ++ + KA +
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG 226
Query: 351 MTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGL 410
M TY +I + N + + E+ + G + T N ++ C G
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286
Query: 411 PTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLE 470
EA L + G+ D TY +L + K + +L+ M G+ P +
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTA 346
Query: 471 ALETF 475
++ F
Sbjct: 347 LIDGF 351
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 158/370 (42%), Gaps = 50/370 (13%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
R D G + ++ + +G A+ L ++ + GC PD YNA++ K
Sbjct: 223 RGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVL--------KGL 274
Query: 199 ALAKALGYFQK-MKGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
+AK G Q+ M+ M R C PNIVT+N L+ + ++V+ + ++ E PDI
Sbjct: 275 CMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDI 334
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI------------------------- 290
Y ++D K G ++ +L+RM S KP++
Sbjct: 335 RMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAE 394
Query: 291 ----------ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
+TFN+L+D + + D++ ++ + ++ P + T+ ++I + K L
Sbjct: 395 MFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGL 454
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTL 398
+A + + MTA P+ I+Y I + G C + A ++ ++ + G + T
Sbjct: 455 IDEAVMLLKSMTACGCKPNTISYT--IVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITF 512
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N ++ C GL +A L + G +PD +Y + KA + +LL M
Sbjct: 513 NTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVN 572
Query: 459 NGIVPNKRFF 468
G+ PN +
Sbjct: 573 KGMSPNTIIY 582
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 149/354 (42%), Gaps = 36/354 (10%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA---------------HLH 192
Y ++ + +G+ A+ + EM GC P P +Y+ ++ A LH
Sbjct: 162 YFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLH 221
Query: 193 TRDKA----------------KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
R A ++ +AL + + C+P++V+YN +L+ A+
Sbjct: 222 ARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSF-GCEPDVVSYNAVLKGLCMAKRW 280
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
V L +E+ P+I T+N ++ +NG+ + + VL++M + C PDI + +
Sbjct: 281 GCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATI 340
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
ID K + ++ + KP + +N+++ A + E + +M
Sbjct: 341 IDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDC 400
Query: 357 TPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+T+ ++ +C N V R E+ +++ + G V T ++ +C GL EA
Sbjct: 401 PLDDVTFNILVDF--FCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEA 458
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+L ++ G P++ +Y ++ K A + L+ +M Q G N F
Sbjct: 459 VMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITF 512
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 143/326 (43%), Gaps = 7/326 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +Y+ +I + K+G +A + + M + G +P+ YN L+ L + ++ + +
Sbjct: 333 DIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKG-LCSAERWEETEEL 391
Query: 204 LG-YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
L F K C + VT+NIL+ Q VD+V L +++ E PD+ TY V+
Sbjct: 392 LAEMFDK-----DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVI 446
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+ + K G+I E +L M + CKP+ I++ +++ + + E + ++
Sbjct: 447 NGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCP 506
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
TFN++I K L +A + ++M +P I+Y +I G A E+
Sbjct: 507 LNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALEL 566
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+ + G +++ A G + +F+N + + D+ Y + + K
Sbjct: 567 LNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCK 626
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFF 468
E + L M +G VPN+ +
Sbjct: 627 RGETERAIEFLAYMVSSGCVPNESTY 652
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 118/277 (42%), Gaps = 14/277 (5%)
Query: 183 YNALITAHLHTR--DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQV 239
YNA++ + + A+ LA A+ PN TY ++RA CA+ R D +
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVPV----------PPNAYTYFPVVRALCARGRIADAL 179
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
A+ E+ AP Y+ +++A + G + VL + + C D+ NL++++
Sbjct: 180 -AVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNA 238
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
+ + D+ + + L +P + ++N+++ A+ G + + ++M M P+
Sbjct: 239 ICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPN 298
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
+T+ +I+ R E+ ++ + G + +++ C G A +
Sbjct: 299 IVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILN 358
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
+ G+ P+ Y L K A E ++LL M
Sbjct: 359 RMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEM 395
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 160/355 (45%), Gaps = 16/355 (4%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQ--RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM 171
+L + ++ + LE+ R M R + Y+ +I + K A +F +M
Sbjct: 174 ILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQM 233
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLR- 228
++G +P+ YN LI +L + K K + + L +KM +G+ KP+ TY LL
Sbjct: 234 IDNGVKPNNDTYNCLIHGYL-SIGKWKEVVQML---EKMSARGL---KPDCYTYGSLLNY 286
Query: 229 ACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKP 288
CA + ++++ + E+ L+PD + +N AY K GMI + + ++M+ + P
Sbjct: 287 LCA----LSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSP 342
Query: 289 DIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVF 348
+++ + LID+ K D E F +++ P + FNS++ +AE +
Sbjct: 343 NVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELV 402
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
+M P+ + + +I V R + D + +G + ++ YC+
Sbjct: 403 YEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLA 462
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
G EA+ +F+ ++G++P TY L Y A+ + L + M + G+ P
Sbjct: 463 GRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTP 517
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 139/323 (43%), Gaps = 9/323 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA--HLHTRDKAKALA 201
D I++ + K G AM +F++MR G P+ Y ALI A L D A+
Sbjct: 308 DHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEV-- 365
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
F +M E PNIV +N L+ ++ L E+ + + P+ +N +
Sbjct: 366 ----KFNQMIN-EGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTL 420
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKE 321
+ G + E ++ M+ +PD ++ LI Y D+ E+VF ++
Sbjct: 421 ICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGL 480
Query: 322 KPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
PT T+N+++ Y A A +F++M TP +TY I+ S A+E
Sbjct: 481 SPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKE 540
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT 441
++ + G + T N +L C + EA +F++ + G+ + T+ ++ A
Sbjct: 541 LYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALL 600
Query: 442 KANMKELVQKLLKRMEQNGIVPN 464
K KE L + NG+VPN
Sbjct: 601 KGGRKEDAMDLFAAIPANGLVPN 623
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 136/340 (40%), Gaps = 15/340 (4%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS---GCRPDPSVYNALITAHLHTRDKAKAL 200
DT YS L+ + + A+ L M N C P+ Y +I KA+
Sbjct: 168 DTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLC----KAQLF 223
Query: 201 AKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+A G FQ+M KPN TYN L+ +V + +++ L PD YTY
Sbjct: 224 DRAEGVFQQMID-NGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGS 282
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
+++ + EM S L M N PD FN+ +Y K DK +F +
Sbjct: 283 LLNYLCA---LSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 339
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSR 378
P + + ++I K AE F +M TP+ + + ++ YG C D R
Sbjct: 340 LSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLV--YGLCTVDKWER 397
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A E+ E+ G N ++ C G E L + ++GV PD+ +Y L
Sbjct: 398 AEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLIS 457
Query: 439 AYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
Y A + +K+ M G+ P + + L + S+
Sbjct: 458 GYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSA 497
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 149/361 (41%), Gaps = 7/361 (1%)
Query: 109 SEHCF-LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWL 167
H F + F K + +++F M +Q + Y LI + K G+ A
Sbjct: 308 DHHIFNIFFSAYAKCGMIDKAMDIFNKM-RQHGLSPNVVNYGALIDALCKLGRVDDAEVK 366
Query: 168 FSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILL 227
F++M N G P+ V+N+L+ L T DK + A+ L Y +G+ C PN V +N L+
Sbjct: 367 FNQMINEGVTPNIVVFNSLVYG-LCTVDKWER-AEELVYEMLDQGI--C-PNAVFFNTLI 421
Query: 228 RACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
V + L + + PD ++Y ++ Y G E E V M S
Sbjct: 422 CNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLS 481
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P +T+N L+ Y D +F+ ++ P + T+N+++ + + +A+ +
Sbjct: 482 PTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKEL 541
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
+ M TY I+ + V A ++F L G + + T M+ A
Sbjct: 542 YLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLK 601
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRF 467
G +A LF G+ P+ TY+L+ + + E L ME+NG PN +
Sbjct: 602 GGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQM 661
Query: 468 F 468
Sbjct: 662 L 662
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 4/117 (3%)
Query: 347 VFQKMT---AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLE 403
+F +M ++K P+ TY +I + + F + K G + +N +L+
Sbjct: 82 LFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLK 141
Query: 404 AYCMNGLPTEA-DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQN 459
C EA D+L + +G TPD+ +Y +L K + N E +LL+ M +
Sbjct: 142 GLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMAND 198
>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
Length = 536
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 152/322 (47%), Gaps = 10/322 (3%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSE-MRNSGCRPDPSVYNALITAHLHTRDKAKALAKALG 205
+ + L+ + K + AM LF E +R C D +N LI L KA+ KAL
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-DTKTFNILIRG-LCGVGKAE---KALE 227
Query: 206 YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHE-SILAPDIYTYNGVMDA 264
M G C+P+IVTYN L++ ++ +++ + +FK++ S+ +PD+ TY ++
Sbjct: 228 LLGVMSGFG-CEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISG 286
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
Y K G ++E S+L M P +TFN+L+D Y K E++ ++ P
Sbjct: 287 YCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPD 346
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+ TF S+I Y + + ++++M A P+ TY +I + + +ARE+
Sbjct: 347 VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLG 406
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYT-KA 443
+L+ + N +++ +C G EA+++ E PD T+ +L + K
Sbjct: 407 QLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKG 466
Query: 444 NMKELVQKLLKRMEQNGIVPNK 465
M E V + +M G P+K
Sbjct: 467 RMFEAVS-IFHKMVAIGCSPDK 487
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 168/390 (43%), Gaps = 14/390 (3%)
Query: 82 LVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFL----LFEELGKSDKWLQCLEVFRWMQK 137
L+ L+ SF++K L ++ E C + L L K D+ +++F +
Sbjct: 140 LLGFLVSSFAEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFD--EH 197
Query: 138 QRWY-IADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
R+ DT ++ LI + G+ A+ L M GC PD YN LI K
Sbjct: 198 LRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFC----K 253
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+ L KA F+ +K C P++VTY ++ +A + + ++L ++ + P
Sbjct: 254 SNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNV 313
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
T+N ++D Y K G + E + +M S C PD++TF LID Y + + ++++ +
Sbjct: 314 TFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM 373
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
P T++ +I KA + ++ + P Y +I + V
Sbjct: 374 NARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKV 433
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+ A I +E+ K T ++ +CM G EA +F +G +PD T L
Sbjct: 434 NEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSL 493
Query: 437 YKAYTKANM-KEL--VQKLLKRMEQNGIVP 463
KA M KE + ++ ++ + N +VP
Sbjct: 494 LSCLLKAGMAKEAYHLNQIARKGQSNNVVP 523
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 142/332 (42%), Gaps = 8/332 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L + K G LA +F M++ G P+ + L+++ A A L F
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSF 165
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ +E C + N LL + V+ LF E D T+N ++
Sbjct: 166 E----VEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCG 218
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH-SKEKPTLP 326
G ++ +L M C+PDI+T+N LI + K +K ++FK + S P +
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDEL 386
T+ SMI Y KA +A + M + P+ +T+ ++ Y + A EI ++
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKM 338
Query: 387 SKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMK 446
G V T ++++ YC G ++ L+E + G+ P++ TY +L A N
Sbjct: 339 ISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRL 398
Query: 447 ELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
++LL ++ I+P + ++ F +
Sbjct: 399 LKARELLGQLASKDIIPQPFMYNPVIDGFCKA 430
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 130/320 (40%), Gaps = 10/320 (3%)
Query: 151 LIAVMGKKGQTRLAM-WLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQK 209
L++ +KG+ A L GC V N+L L+T K + A+ F +
Sbjct: 144 LVSSFAEKGKLHFATALLLQSFEVEGC---CMVVNSL----LNTLVKLDRVEDAMKLFDE 196
Query: 210 MKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNG 269
+ C + T+NIL+R ++ L + PDI TYN ++ + K+
Sbjct: 197 HLRFQSCN-DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSN 255
Query: 270 MIKEMESVLSRMKSNQ-CKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTF 328
+ + + +KS C PD++T+ +I Y K + + ++ PT TF
Sbjct: 256 ELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTF 315
Query: 329 NSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSK 388
N ++ Y KA AE + KM + P +T+ +I Y VS+ +++E++
Sbjct: 316 NVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNA 375
Query: 389 LGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKEL 448
G T + ++ A C +A L + + P Y + + KA
Sbjct: 376 RGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNE 435
Query: 449 VQKLLKRMEQNGIVPNKRFF 468
+++ ME+ P+K F
Sbjct: 436 ANVIVEEMEKKKCKPDKITF 455
>gi|115475155|ref|NP_001061174.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|40253652|dbj|BAD05595.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623143|dbj|BAF23088.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|125602452|gb|EAZ41777.1| hypothetical protein OsJ_26318 [Oryza sativa Japonica Group]
gi|215695295|dbj|BAG90486.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704436|dbj|BAG93870.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 609
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 171/394 (43%), Gaps = 22/394 (5%)
Query: 78 ESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQK 137
ES V +L S KEPL R V+ + + F++L KW E+ W++
Sbjct: 86 ESGSAVSILKTQRSKKEPLPRD-----AVLGT---LMRFKQL---KKWNLVSEILEWLRT 134
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
Q W+ + L+ GK G A + M G +P AL+ A+ +A
Sbjct: 135 QHWWNFSEMDFLMLVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAY----GRA 190
Query: 198 KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL---HESILAPD 254
K KA F++M+ +P+ VTY I+L++ + + A+F++L + PD
Sbjct: 191 KQYRKAEAVFRRMQ-TSGPEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPD 249
Query: 255 IYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFK 314
++ ++ Y K G + + ++M +TFN L+ + ++ ++
Sbjct: 250 QKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLSTVTFNSLMSF---ETNYKEVSSIYD 306
Query: 315 SLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD 374
+ + KP + +++ +I YGKAR + +A VF++M P+ +Y +I +
Sbjct: 307 QMQRTALKPDVVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISG 366
Query: 375 NVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYK 434
V A +F + + + + + M+ AY A+ F G+ P+ Y
Sbjct: 367 LVEEAHTVFKAMRRHRVEPDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYG 426
Query: 435 LLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
L K Y+K N E V ++ +RM G+ PN+ +
Sbjct: 427 TLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIY 460
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 155/330 (46%), Gaps = 21/330 (6%)
Query: 114 LLFEELGKSDKWLQCLEVFRWM--QKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEM 171
++ + + DK+ + +F + +K+ + D ++ +I + K G A LF++M
Sbjct: 217 IILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDYAQARKLFAQM 276
Query: 172 RNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERC--KPNIVTYNILLRA 229
G +N+L++ + ++ + Y Q M+R KP++V+Y++L++A
Sbjct: 277 SERGIPLSTVTFNSLMSFETNYKEVSSI------YDQ----MQRTALKPDVVSYSLLIKA 326
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
+AR ++ A+F+E+ ++ + P +YN ++DA+ +G+++E +V M+ ++ +PD
Sbjct: 327 YGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRVEPD 386
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
+ ++ ++ +Y D E+ F+ + KP + + +++ Y K + V++
Sbjct: 387 LCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNVERVMRVYE 446
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
+M P+ Y I+ ++G + A F E+ G N +L +
Sbjct: 447 RMRMQGVEPNQTIYTTIMDVHGRNSDFGNAVIWFKEMEARGYPADKKAKNILL---SLAK 503
Query: 410 LPTEADLLFENSHNMGVT----PDSSTYKL 435
P E + E + N + PD +TY L
Sbjct: 504 TPEEQEEANELTGNCAIQLEAKPDGTTYGL 533
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 166/356 (46%), Gaps = 22/356 (6%)
Query: 89 SFSDKEPLVRTLNK--YVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTG 146
FS E +++ +NK Y V S+ L E G++ ++ + VFR MQ +
Sbjct: 157 DFSRAERVLKYMNKKGYKPSVISQTA--LMEAYGRAKQYRKAEAVFRRMQTSG--PEPSA 212
Query: 147 IYSKLIA---VMGKKGQTRLAMW--LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA 201
+ ++I V G K + A++ L +E R S +PD +++ +I + KA A
Sbjct: 213 VTYQIILKSFVEGDKYKEAEAIFEDLLNEKRAS-FKPDQKMFHMMI----YMYKKAGDYA 267
Query: 202 KALGYFQKMKGMERCKP-NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNG 260
+A F +M ER P + VT+N L+ + N +V++++ ++ + L PD+ +Y+
Sbjct: 268 QARKLFAQMS--ERGIPLSTVTFNSLM---SFETNYKEVSSIYDQMQRTALKPDVVSYSL 322
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ AYGK +E +V M +P ++N+LID++ ++ VFK++ +
Sbjct: 323 LIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHR 382
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
+P L ++ +M++ Y A AE F+++ P+ + Y ++ Y +NV R
Sbjct: 383 VEPDLCSYTTMVLAYVNASDMDGAEKFFRRIKEDGLKPNVVVYGTLMKGYSKLNNVERVM 442
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+++ + G + + +++ + N A + F+ G D +L
Sbjct: 443 RVYERMRMQGVEPNQTIYTTIMDVHGRNSDFGNAVIWFKEMEARGYPADKKAKNIL 498
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 111/221 (50%), Gaps = 6/221 (2%)
Query: 261 VMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
++ AYGK G E VL M KP +I+ L+++YG+ + + K E VF+ + S
Sbjct: 148 LVTAYGKLGDFSRAERVLKYMNKKGYKPSVISQTALMEAYGRAKQYRKAEAVFRRMQTSG 207
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK---YTPSFITYECIITMYGYCDNVS 377
+P+ T+ ++ ++ + +AE +F+ + K + P + +I MY + +
Sbjct: 208 PEPSAVTYQIILKSFVEGDKYKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDYA 267
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
+AR++F ++S+ G + T N+++ ++ N E +++ + PD +Y LL
Sbjct: 268 QARKLFAQMSERGIPLSTVTFNSLM-SFETN--YKEVSSIYDQMQRTALKPDVVSYSLLI 324
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
KAY KA +E + + M G+ P ++ + ++ F+ S
Sbjct: 325 KAYGKARREEEALAVFEEMLDAGVRPTRKSYNILIDAFAIS 365
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 145/328 (44%), Gaps = 42/328 (12%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
++ L+ K G A+ F+ M + GC+PD ++ +I+ + K + +A +F
Sbjct: 184 FTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVIS----SLSKKRRAIEAQSFF 239
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+K +R +P++V Y L+ +A N+ + +F E+ + + P++YTY+ V+DA +
Sbjct: 240 DSLK--DRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCR 297
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+G I V S M C P+ ITFN L+ + K +K+ Q
Sbjct: 298 SGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQ---------------- 341
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
V+ +M + P ITY +I + DN+ A +I + +
Sbjct: 342 -------------------VYNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVK 382
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
K G ++ S+ N + G A +F ++ P++ TY +L + + +
Sbjct: 383 K-GCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTD 441
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETF 475
+V KL K M++N I PN + + TF
Sbjct: 442 MVLKLRKEMDENEIEPNANTYRVLISTF 469
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 152/322 (47%), Gaps = 12/322 (3%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +S +I+ + KK + A F +++ PD VY +L+ H +A +++A
Sbjct: 215 DKIAFSVVISSLSKKRRAIEAQSFFDSLKDR-FEPDVVVYTSLV----HGWCRAGNISEA 269
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F +MK M +PN+ TY+I++ A ++ + + + +F E+ + P+ T+N +M
Sbjct: 270 ERVFGEMK-MAGIQPNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMR 328
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
+ K G +++ V ++MK C PD IT+N LI+S+ + D +E+ K L K+
Sbjct: 329 VHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRD---DNLEEAVKILNSVKKGC 385
Query: 324 TL--PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRARE 381
L +FN + K A +F KM +K P+ +TY ++ M+ + +
Sbjct: 386 NLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLK 445
Query: 382 IFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF-ENSHNMGVTPDSSTYKLLYKAY 440
+ E+ + + +T ++ +C G A F E + P Y+++ +
Sbjct: 446 LRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQL 505
Query: 441 TKANMKELVQKLLKRMEQNGIV 462
KA + ++L+++M G V
Sbjct: 506 RKAGQLKKHEELVEKMVNRGFV 527
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 114/259 (44%), Gaps = 1/259 (0%)
Query: 200 LAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYN 259
+ L +F +E + Y ++ + R D L + + + T+
Sbjct: 126 FPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDLMKTRNVEIPVETFT 185
Query: 260 GVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
++ Y K G+ E +RM+ CKPD I F+++I S K++ + + F SL
Sbjct: 186 ILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSL-KD 244
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRA 379
+ +P + + S++ + +A +AE VF +M P+ TY +I ++RA
Sbjct: 245 RFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRA 304
Query: 380 REIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKA 439
++F E+ +G D T N ++ + G + ++ +G PD+ TY L ++
Sbjct: 305 HDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIES 364
Query: 440 YTKANMKELVQKLLKRMEQ 458
+ + + E K+L +++
Sbjct: 365 HCRDDNLEEAVKILNSVKK 383
>gi|410110127|gb|AFV61143.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
origanoides]
Length = 408
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 142/302 (47%), Gaps = 5/302 (1%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
LF EMR PD Y+ LIT H K AL + QKM+ +R ++V Y+ L
Sbjct: 2 LFDEMRQRALSPDRYTYSTLIT-HF---GKEGLFDAALSWLQKME-QDRVPGDLVLYSNL 56
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+ + + + ++F L S PD+ YN +++ +GK + +E S++S MK+
Sbjct: 57 IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGV 116
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
P+ +++ L+ Y + + F + VF + K L T N MI YG+ + +A+
Sbjct: 117 MPNTTSYSTLLXMYVENKKFLEALSVFSEMREIKCLLDLXTCNIMIDVYGQLGMAKEADK 176
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+F M M P+ ++Y ++ +YG + A +F + + + V T N+M+ Y
Sbjct: 177 LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYG 236
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKR 466
+A+ L + + G+ P+S TY + + K + L +++ +G+ ++
Sbjct: 237 KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 296
Query: 467 FF 468
F
Sbjct: 297 LF 298
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 154/327 (47%), Gaps = 5/327 (1%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
+QR D YS LI GK+G A+ +M D +Y+ LI D
Sbjct: 7 RQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 66
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
+KA++ F ++K P++V YN ++ +A+ + +L E+ + + P+
Sbjct: 67 SKAIS----IFSRLK-RSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTT 121
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+Y+ ++ Y +N E SV S M+ +C D+ T N++ID YG+ + +++F +
Sbjct: 122 SYSTLLXMYVENKKFLEALSVFSEMREIKCLLDLXTCNIMIDVYGQLGMAKEADKLFWGM 181
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P + ++N+++ YG A L G+A ++F+ M + +TY ++ +YG
Sbjct: 182 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEH 241
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A + E+ G + T + ++ + G A +LF+ + GV D ++ +
Sbjct: 242 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTM 301
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVP 463
AY +A + ++LL +++ +P
Sbjct: 302 IVAYERAGLVAHAKRLLHELKRPDNIP 328
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 141/340 (41%), Gaps = 42/340 (12%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
K+ + D Y+ +I V GK R A L SEM+ +G P+ + Y+ L+ ++
Sbjct: 77 KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLXMYVEN--- 133
Query: 197 AKALAKALGYFQKMK--------------------------------GMER--CKPNIVT 222
K +AL F +M+ GM + +PN+V+
Sbjct: 134 -KKFLEALSVFSEMREIKCLLDLXTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVS 192
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
YN LLR A + LF+ + + ++ TYN +M YGK ++ +++ M+
Sbjct: 193 YNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQ 252
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
S +P+ IT++ +I +GK D+ +F+ L S + F +MI+ Y +A L
Sbjct: 253 SRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGLVA 312
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAML 402
A+ + ++ P I + I + + A +F + G+ ++ M+
Sbjct: 313 HAKRLLHELK----RPDNIPRDTAIHILAGAGRIEEATYVFRQAVDAGEVKDITVFERMI 368
Query: 403 EAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+ +F+ +G PDS+ ++ AY K
Sbjct: 369 HLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLNAYGK 408
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 132/283 (46%), Gaps = 12/283 (4%)
Query: 124 KWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY 183
K+L+ L VF M++ + + D + +I V G+ G + A LF MR G P+ Y
Sbjct: 135 KFLEALSVFSEMREIKCLL-DLXTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSY 193
Query: 184 NALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALF 243
N L+ + A+ +A+ F+ M+ + + N+VTYN ++ + ++ N L
Sbjct: 194 NTLLRVY----GDAELFGEAIHLFRLMQ-RKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 248
Query: 244 KELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR 303
+E+ + P+ TY+ ++ +GK G + + +++S+ + D I F +I +Y +
Sbjct: 249 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERA 308
Query: 304 QAFDKMEQVFKSLMHSKEKP-TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFIT 362
K L+H ++P +P ++ I G R++ +A YVF++
Sbjct: 309 GLVAHA----KRLLHELKRPDNIPRDTAIHILAGAGRIE-EATYVFRQAVDAGEVKDITV 363
Query: 363 YECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAY 405
+E +I + S E+FD++ LG + + +L AY
Sbjct: 364 FERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLNAY 406
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 111/259 (42%), Gaps = 35/259 (13%)
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGM-------IKEME------------------ 275
LF E+ + L+PD YTY+ ++ +GK G+ +++ME
Sbjct: 1 GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELS 60
Query: 276 ----------SVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTL 325
S+ SR+K + PD++ +N +I+ +GK + F + + + + P
Sbjct: 61 RKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNT 120
Query: 326 PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDE 385
++++++ Y + + +A VF +M +K T +I +YG A ++F
Sbjct: 121 TSYSTLLXMYVENKKFLEALSVFSEMREIKCLLDLXTCNIMIDVYGQLGMAKEADKLFWG 180
Query: 386 LSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANM 445
+ K+G + V + N +L Y L EA LF + + TY + Y K
Sbjct: 181 MRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLE 240
Query: 446 KELVQKLLKRMEQNGIVPN 464
E L++ M+ GI PN
Sbjct: 241 HEKANNLIQEMQSRGIEPN 259
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 157/356 (44%), Gaps = 16/356 (4%)
Query: 143 ADTGIYSKLIAVMGKK----GQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
A G K A++ ++ G+ A+ +F M GC D +N + L K+K
Sbjct: 130 ARLGPTPKTFAIIAERYASAGKPHRAVKVFLSMHQFGCFQDLQSFNTI----LDVLCKSK 185
Query: 199 ALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
+ A F+ KG + + + V+YN+++ + ++ + KE+ + L P++ +Y
Sbjct: 186 RVEMAYNLFKVFKG--KFRADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSY 243
Query: 259 NGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMH 318
N ++ Y + G I E MK C+ D+IT+ +I +G + +VF +++
Sbjct: 244 NTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVK 303
Query: 319 SKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
P++ T+N+ I K A +F++M Y P+ ITY +I + + R
Sbjct: 304 KGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMER 363
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYK 438
A E + G + V T N ++ +C G +A LF+ + P+ TY +L
Sbjct: 364 AMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTSGDCLPNLDTYNILIS 423
Query: 439 A-YTKANMKELV--QKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDL 491
A + + +L+ LL M G VP K F L L G+Q G AK L
Sbjct: 424 AMFVRKKSDDLLVAGNLLIEMVDRGFVPRKFTFNRVLNGL--LLTGNQ-GFAKEIL 476
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 116/297 (39%), Gaps = 34/297 (11%)
Query: 202 KALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGV 261
KAL +F + + +Y+ + A+ R+ + +L + + L P T+ +
Sbjct: 83 KALQFFNLLSHHPSYSHHPSSYDHAIDISARLRDSPSLRSLVYRMRSARLGPTPKTFAII 142
Query: 262 MDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID----------SYGKRQAF----- 306
+ Y G V M C D+ +FN ++D +Y + F
Sbjct: 143 AERYASAGKPHRAVKVFLSMHQFGCFQDLQSFNTILDVLCKSKRVEMAYNLFKVFKGKFR 202
Query: 307 -------------------DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
+K ++ K ++ P L ++N+M+ Y +A +A
Sbjct: 203 ADCVSYNVMVNGWCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDF 262
Query: 348 FQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCM 407
F +M ITY +I +G + RAR++FD + K G V+T NA ++ C
Sbjct: 263 FLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCK 322
Query: 408 NGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A ++FE G P+S TY L+ + E + + RM+ +G PN
Sbjct: 323 KDNVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEFMGRMKDDGCEPN 379
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 24/192 (12%)
Query: 95 PLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAV 154
P V T N +++V L K D + +F M + Y+ ++ Y+ +I
Sbjct: 308 PSVATYNAFIQV------------LCKKDNVDNAIVIFEEMV-VKGYVPNSITYNLVIRG 354
Query: 155 MGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME 214
+ +G+ AM M++ GC P+ YN +I + D+ + + KAL FQKM +
Sbjct: 355 LCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIR---YFCDEGE-IDKALDLFQKMTSGD 410
Query: 215 RCKPNIVTYNILLRACAQARNVDQV---NALFKELHESILAPDIYTYNGVMDAY---GKN 268
C PN+ TYNIL+ A + D + L E+ + P +T+N V++ G
Sbjct: 411 -CLPNLDTYNILISAMFVRKKSDDLLVAGNLLIEMVDRGFVPRKFTFNRVLNGLLLTGNQ 469
Query: 269 GMIKEMESVLSR 280
G KE+ + SR
Sbjct: 470 GFAKEILRLQSR 481
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 141/321 (43%), Gaps = 5/321 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D I++ LI K G+ AM LFS+MR G PD Y ++ A A+A+
Sbjct: 377 DHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQ- 435
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
F ++ E P+ V + L+ D+ L E+ + P+ +N +++
Sbjct: 436 ---FGRLIS-EGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLN 491
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
K GM+ +++ M + D+IT+N LID Y D+ ++ + ++ KP
Sbjct: 492 HLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKP 551
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
T+N+MI Y K A +F++M + P +TY I+ + A+E++
Sbjct: 552 NEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELY 611
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ K G + T N +L C N +A +F+N + + ++ T+ ++ A K
Sbjct: 612 LWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKG 671
Query: 444 NMKELVQKLLKRMEQNGIVPN 464
+ + L + G+VPN
Sbjct: 672 GRHDEAKDLFASLLARGLVPN 692
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 134/318 (42%), Gaps = 5/318 (1%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ L+ + K G++ A +F M G +P+ + Y L LH +L K
Sbjct: 307 DVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTL----LHGYATEGSLVK- 361
Query: 204 LGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMD 263
+ + M +P+ +NIL+ + VD LF ++ L PD TY VMD
Sbjct: 362 MHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMD 421
Query: 264 AYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKP 323
A G + + + R+ S PD + F LI R +DK E++ ++ P
Sbjct: 422 ALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICP 481
Query: 324 TLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIF 383
FN+++ + K + +A+ +F M + ITY +I Y V A ++
Sbjct: 482 NNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLL 541
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
+ + G T N M+ YC NG +A LF + GV P TY + + +A
Sbjct: 542 EGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQA 601
Query: 444 NMKELVQKLLKRMEQNGI 461
++L M ++GI
Sbjct: 602 RRTAAAKELYLWMIKSGI 619
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 160/393 (40%), Gaps = 47/393 (11%)
Query: 114 LLFEELGKSDKWLQCLEVFRWM----QKQRWYIADTGIYSKLIAVMGKKG-QTRLAMWLF 168
+L + L ++ Q L + M + Y D Y+ +I + ++G Q A LF
Sbjct: 167 ILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLF 226
Query: 169 SEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLR 228
+M + G PD YN++I+A KA+A+ KA +M PN +T+N LL
Sbjct: 227 DQMLDQGLSPDVVTYNSIISA----LSKARAMDKAAVVLVRMV-KNGAMPNRITHNSLLH 281
Query: 229 A-CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCK 287
C+ + D + +FK + + PD++TYN +M KNG E + M K
Sbjct: 282 GYCSSGKPNDAI-GVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHK 340
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV 347
P+ T+ L+ Y + KM + ++ + +P FN +I Y K A +
Sbjct: 341 PNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLL 400
Query: 348 FQKMTAMKYTPSFITYECI---ITMYGYCDN------------------VSR-------A 379
F KM P +TY + + M G D+ V R A
Sbjct: 401 FSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCA 460
Query: 380 REIFDELSKLGKDMKVSTL-------NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
R+ +D+ +L +M + N +L C G+ A +F+ + V D T
Sbjct: 461 RDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVIT 520
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPNK 465
Y L Y + KLL+ M +G+ PN+
Sbjct: 521 YNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNE 553
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 141/326 (43%), Gaps = 9/326 (2%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEM-----RNSGCRPDPSVYNALITAHLHTRDKAKALAK 202
Y+ L+ + + +++ A+ L M G PD YN +I L + + L
Sbjct: 165 YTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLR---EGRQLDT 221
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A F +M + P++VTYN ++ A ++AR +D+ + + ++ P+ T+N ++
Sbjct: 222 AYHLFDQMLD-QGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLL 280
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
Y +G + V RM + +PD+ T+N L+ K + ++F S++ K
Sbjct: 281 HGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHK 340
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P T+ +++ Y K ++ M P + +I Y V A +
Sbjct: 341 PNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLL 400
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
F ++ + G + T +++A CM G +A F + G+TPD+ ++ L
Sbjct: 401 FSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCA 460
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFF 468
+ + ++L M GI PN FF
Sbjct: 461 RDKWDKAEELAVEMIGRGICPNNIFF 486
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 139/332 (41%), Gaps = 39/332 (11%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
YS +I + G LA + SG + ++ L+ A + ++A+ AL
Sbjct: 94 YSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIAL--- 150
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
++M + C PN+ +Y ILL+ Q L LH ++A D T G
Sbjct: 151 RRMPVLG-CTPNVFSYTILLKGLCDENRSQQALHL---LHTMMVADD--TRGGY------ 198
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR-QAFDKMEQVFKSLMHSKEKPTLP 326
PD++++N +I+ + + D +F ++ P +
Sbjct: 199 -------------------PPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVV 239
Query: 327 TFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFD 384
T+NS+I KAR KA V +M P+ IT+ + ++GYC + + A +F
Sbjct: 240 TYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSL--LHGYCSSGKPNDAIGVFK 297
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ + G + V T N ++ C NG EA +F++ G P+S+TY L Y
Sbjct: 298 RMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEG 357
Query: 445 MKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
+ LL M +NGI P+ F + T++
Sbjct: 358 SLVKMHHLLDMMVRNGIQPDHYIFNILIGTYT 389
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 125/286 (43%), Gaps = 9/286 (3%)
Query: 201 AKALGYFQKMKGMERCK--PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTY 258
A A+ F++M + R K PN++TY++++ C++ ++D A + S + T+
Sbjct: 70 AVAISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITF 129
Query: 259 NGVMDAYGKNGMIKE-MESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLM 317
+ ++ A E M+ L RM C P++ ++ +L+ + + ++M
Sbjct: 130 SPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMM 189
Query: 318 HSKEK-----PTLPTFNSMIINYGK-ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
+ + P + ++N++I + R A ++F +M +P +TY II+
Sbjct: 190 VADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALS 249
Query: 372 YCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSS 431
+ +A + + K G T N++L YC +G P +A +F+ GV PD
Sbjct: 250 KARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVF 309
Query: 432 TYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
TY L K +K+ M + G PN + L +++
Sbjct: 310 TYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYAT 355
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 86/201 (42%), Gaps = 13/201 (6%)
Query: 288 PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINY-GKARLQGKAEY 346
P++IT++++ID + D ++ S TF+ ++ K R +
Sbjct: 89 PNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDI 148
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL--------GKDMKVSTL 398
++M + TP+ +Y I + G CD +R+++ L + G V +
Sbjct: 149 ALRRMPVLGCTPNVFSYT--ILLKGLCDE-NRSQQALHLLHTMMVADDTRGGYPPDVVSY 205
Query: 399 NAMLEAYCMNGLPTE-ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRME 457
N ++ G + A LF+ + G++PD TY + A +KA + +L RM
Sbjct: 206 NTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMV 265
Query: 458 QNGIVPNKRFFLEALETFSSS 478
+NG +PN+ L + SS
Sbjct: 266 KNGAMPNRITHNSLLHGYCSS 286
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/442 (23%), Positives = 184/442 (41%), Gaps = 39/442 (8%)
Query: 60 CCVWTRPRSKRGRKSEELESKELV-----------RVLMRSFSDKEPLVRTLNKYVKVVR 108
C +W R + GR E + E + LMR K+ V+ +Y++ +
Sbjct: 153 CNIWIRGLCEGGRLEEAVALVESMDAYIAPDVVTYNTLMRGLC-KDSKVQEAAQYLRRMM 211
Query: 109 SEHCF-------LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQT 161
++ C + + K D + E+ + + ++ D Y LI + +G
Sbjct: 212 NQGCIPDDFTYNTIIDGYCKRDMLQEATELLK-DAIFKGFVPDRVTYCSLINGLCAEGDV 270
Query: 162 RLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAK---ALGYFQKMKGM--ERC 216
A+ LF+E + +PD VYN+L+ K L + L Q M M + C
Sbjct: 271 ERALELFNEAQAKDLKPDLVVYNSLV----------KGLCRQGLILHALQVMNEMVEDGC 320
Query: 217 KPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMES 276
P+I TYNI++ + N+ + + PD++T+N ++D Y K +
Sbjct: 321 HPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQ 380
Query: 277 VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYG 336
++ RM PD IT+N +++ K ++ + F+ ++ +P T+N +I N+
Sbjct: 381 LVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFC 440
Query: 337 KARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMK 394
K +A V +M+ P I++ +I +G+C N + A +F +L + G
Sbjct: 441 KINQLEEASGVIVRMSQDGLVPDTISFNTLI--HGFCRNGDLDGAYLLFQKLDEKGYSAT 498
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
T N ++ AY A+ +F + G PD TY++L KA + L
Sbjct: 499 ADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLA 558
Query: 455 RMEQNGIVPNKRFFLEALETFS 476
M G VP+ F L + +
Sbjct: 559 EMVSKGFVPSMATFGRVLNSLA 580
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 148/357 (41%), Gaps = 31/357 (8%)
Query: 129 LEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALIT 188
LE+F Q + D +Y+ L+ + ++G A+ + +EM GC PD YN +I
Sbjct: 274 LELFNEAQAKDLK-PDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVIN 332
Query: 189 AHL---HTRDKAKALAKAL----------------GYFQKMK-----------GMERCKP 218
+ D A + A+ GY +++K M P
Sbjct: 333 GLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAP 392
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
+ +TYN +L +A +VN F+E+ P+ TYN +++ + K ++E V+
Sbjct: 393 DAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVI 452
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
RM + PD I+FN LI + + D +F+ L T TFN +I Y
Sbjct: 453 VRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSK 512
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTL 398
AE +F +M + Y P TY ++ NV RA E+ G ++T
Sbjct: 513 LNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATF 572
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+L + MN +EA + MGV P+ L A K LV++L+K+
Sbjct: 573 GRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEVVDTILSTDKKEIAAPKILVEELMKK 629
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 99/239 (41%), Gaps = 42/239 (17%)
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSR-----MKSNQ----------C 286
LF E+ + PD+ T+N V+ A + G I E ++L++ M N+ C
Sbjct: 102 LFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLC 161
Query: 287 K-------------------PDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
+ PD++T+N L+ K + Q + +M+ P T
Sbjct: 162 EGGRLEEAVALVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFT 221
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDE 385
+N++I Y K + +A + + + P +TY +I G C +V RA E+F+E
Sbjct: 222 YNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLIN--GLCAEGDVERALELFNE 279
Query: 386 LSKLGKDMK--VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
KD+K + N++++ C GL A + G PD TY ++ K
Sbjct: 280 AQ--AKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCK 336
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 111/288 (38%), Gaps = 27/288 (9%)
Query: 216 CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEME 275
C P YN ++ A DQ + ++ + + +APD T+ + ++ G
Sbjct: 6 CPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVAL 65
Query: 276 SVLSRMKSNQCKPDIITFNLLIDS-YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSM--- 331
+L + C + + ++ Y +D +F ++ P + TFN++
Sbjct: 66 RLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDA-RHLFDEMLRRDVFPDVATFNNVLHA 124
Query: 332 IINYGKARLQGK--AEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
+ G G A+ + + M+ K+T C I + G C+ R E + +
Sbjct: 125 LCQKGDIMESGALLAKVLKRGMSVNKFT-------CNIWIRGLCEG-GRLEEAVALVESM 176
Query: 390 GKDM--KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+ V T N ++ C + EA N G PD TY + Y K +M +
Sbjct: 177 DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQ 236
Query: 448 LVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQSGSAKTDLTRSL 495
+LLK G VP++ T+ S + G A+ D+ R+L
Sbjct: 237 EATELLKDAIFKGFVPDRV-------TYCSLINGL---CAEGDVERAL 274
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 140/318 (44%), Gaps = 21/318 (6%)
Query: 135 MQKQRWYIADTGI------YSKLIAVMGK--KGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ + R I D G YS LI+ + + +G + A+ LF + G P+ YN L
Sbjct: 131 VDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSE-ALKLFGSVLKQGYEPEVPTYNIL 189
Query: 187 ITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFK 244
I L K + +A F + G+E P+ +TY + + +A V+ + K
Sbjct: 190 IDGLL----KEDRVNEAFELFSGLVKHGLE---PDAITYTVFIDGLCKAGRVEDALLMLK 242
Query: 245 ELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQ 304
++ E PD+ ++N V++ K + E E +LS M++ C P+ I+FN LI +
Sbjct: 243 DMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAG 302
Query: 305 AFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGK---AEYVFQKMTAMKYTPSFI 361
+ K FK ++ KPT+ T+N ++ KAR +G+ A +F M P +
Sbjct: 303 KWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVV 362
Query: 362 TYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENS 421
TY +I G + AR + + G V T N+++ C EA LF
Sbjct: 363 TYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAM 422
Query: 422 HNMGVTPDSSTYKLLYKA 439
G PD+ TY + A
Sbjct: 423 VEKGCVPDTITYGTIISA 440
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 118/250 (47%), Gaps = 8/250 (3%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
PN +TYN LL + AL++ + ++ +PD+ TYN ++ + K G + E +
Sbjct: 8 PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKI 67
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
PD++T+N LI+ + K D+ +++ + ++ P + T+NS++ K
Sbjct: 68 FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCK 127
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC---DNVSRAREIFDELSKLGKDMK 394
G+ + + ++P+ ITY +I+ G C VS A ++F + K G + +
Sbjct: 128 ---NGRVDEARMLIVDKGFSPNVITYSTLIS--GLCRELRGVSEALKLFGSVLKQGYEPE 182
Query: 395 VSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
V T N +++ EA LF G+ PD+ TY + KA E +LK
Sbjct: 183 VPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLK 242
Query: 455 RMEQNGIVPN 464
M++ G VP+
Sbjct: 243 DMDEKGCVPD 252
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 150/355 (42%), Gaps = 20/355 (5%)
Query: 116 FEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSG 175
F ++G+ D + L++F K R ++ D Y+ LI K + A + M +
Sbjct: 55 FCKVGELD---EALKIFDGAVK-RGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSEN 110
Query: 176 CRPDPSVYNALITAHLHTR--DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQ 232
PD YN+L+ D+A+ L G+ PN++TY+ L+ C +
Sbjct: 111 LVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGF----------SPNVITYSTLISGLCRE 160
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
R V + LF + + P++ TYN ++D K + E + S + + +PD IT
Sbjct: 161 LRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAIT 220
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+ + ID K + + K + P + + N++I K + +AE + M
Sbjct: 221 YTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGME 280
Query: 353 AMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC---MNG 409
A +P+ I++ +I +A F E+ K G V T N +++ C G
Sbjct: 281 AKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEG 340
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
EA LF+ G PD TY L KA + ++LL ME G +PN
Sbjct: 341 RIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPN 395
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 132/300 (44%), Gaps = 11/300 (3%)
Query: 171 MRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRAC 230
MR G P+ YNAL++ + ++ A +++M P++VTYN LL
Sbjct: 1 MRKHGFWPNRITYNALLSGLCN----GGRMSDAQALYERMIKAGY-SPDVVTYNTLLHGF 55
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI 290
+ +D+ +F + PD+ TYN +++ + K + E + +L RM S PD+
Sbjct: 56 CKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDV 115
Query: 291 ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYV--F 348
+T+N L++ K D+ + ++ P + T++++I + L+G +E + F
Sbjct: 116 VTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCR-ELRGVSEALKLF 171
Query: 349 QKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMN 408
+ Y P TY +I D V+ A E+F L K G + T ++ C
Sbjct: 172 GSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKA 231
Query: 409 GLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
G +A L+ ++ G PD ++ + K + + LL ME G PN F
Sbjct: 232 GRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISF 291
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 149/351 (42%), Gaps = 19/351 (5%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
K+DK + + + M + + D Y+ L+ + K G+ A L + G P+
Sbjct: 92 KADKLDEAQRILQRMVSENL-VPDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNV 147
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQ 238
Y+ LI+ + + +++AL F + +G E P + TYNIL+ + V++
Sbjct: 148 ITYSTLISGLCR---ELRGVSEALKLFGSVLKQGYE---PEVPTYNILIDGLLKEDRVNE 201
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
LF L + L PD TY +D K G +++ +L M C PD+++ N +I+
Sbjct: 202 AFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVIN 261
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
K + D+ E + + P +FN++I +A KA F++M P
Sbjct: 262 GLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKP 321
Query: 359 SFITYECIITMYGYC-----DNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTE 413
+ +TY ++ G C + A +FD + + G+ V T +A+++ G +
Sbjct: 322 TVVTYNILVD--GLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDD 379
Query: 414 ADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
A L G P+ TY L + +L M + G VP+
Sbjct: 380 ARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPD 430
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 141/326 (43%), Gaps = 27/326 (8%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ L++ + G+ A L+ M +G PD YN L LH K L +AL F
Sbjct: 13 YNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTL----LHGFCKVGELDEALKIF 68
Query: 208 QKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY 265
+G P++VTYN L+ +A +D+ + + + L PD+ TYN +++
Sbjct: 69 DGAVKRGF---VPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGL 125
Query: 266 GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKR-QAFDKMEQVFKSLMHSKEKPT 324
KNG + E ++ P++IT++ LI + + + ++F S++ +P
Sbjct: 126 CKNGRVDEARMLIV---DKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPE 182
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
+PT+N +I K +A +F + P ITY I D + +A + D
Sbjct: 183 VPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFI------DGLCKAGRVED 236
Query: 385 ELSKLGKDM-------KVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
L L KDM V + NA++ C EA++L G +P++ ++ L
Sbjct: 237 ALLML-KDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLI 295
Query: 438 KAYTKANMKELVQKLLKRMEQNGIVP 463
+A + K M + G+ P
Sbjct: 296 CGQCRAGKWKKAMTTFKEMLKRGVKP 321
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 144/326 (44%), Gaps = 13/326 (3%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH--TRDKAKALAKAL 204
+Y ++ + G R ++ + M GC D N ++ A D+A L + L
Sbjct: 148 MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKL 207
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
+F C+ +IV+YN +L+ A+ V L E+ AP+I T+N ++
Sbjct: 208 AFFG-------CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+NG+ + + VL++M + C PDI + +ID K + ++ + KP
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN 320
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREI 382
+ +N+++ A +AE + +M +T+ ++ +C N V R E+
Sbjct: 321 VVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF--FCQNGLVDRVIEL 378
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+++ G V T ++ +C GL EA +L ++ + G P++ +Y ++ K
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFF 468
A ++L+ +M Q G PN F
Sbjct: 439 AGRWVDAEELMSQMIQQGCPPNPVTF 464
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 165/396 (41%), Gaps = 53/396 (13%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ E +S + + V M + + DTG + ++ + ++G A+ L ++
Sbjct: 151 VILEAACRSGGFRNSVRVLEAMHAKGCTL-DTGNCNLVLNAICEQGCVDEAVGLLRKLAF 209
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQK-MKGMER--CKPNIVTYNILLRAC 230
GC D YNA++ K +AK G ++ M M R C PNIVT+N L+
Sbjct: 210 FGCEADIVSYNAVL--------KGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYL 261
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMI------------------- 271
+ ++V+ + ++ E PDI Y ++D K G +
Sbjct: 262 CRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNV 321
Query: 272 ----------------KEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
KE E +LS M C D +TFN+L+D + + D++ ++ +
Sbjct: 322 VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQ 381
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
++ P + T+ ++I + K L +A + + M++ P+ ++Y I + G C +
Sbjct: 382 MLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYT--IVLKGLC-S 438
Query: 376 VSR---AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
R A E+ ++ + G T N ++ C GL +A L + G +PD +
Sbjct: 439 AGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 498
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
Y + KA E +LL M GI PN +
Sbjct: 499 YSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIY 534
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 172/411 (41%), Gaps = 27/411 (6%)
Query: 68 SKRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQ 127
+KR EEL E+VRV D P + T N + + LFE +
Sbjct: 229 AKRWGDVEEL-MDEMVRV------DCAPNIVTFNTLIGYLCRNG---LFERVH------- 271
Query: 128 CLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
EV M + D +Y+ +I + K+G +A + + M + G +P+ YN ++
Sbjct: 272 --EVLAQMS-EHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVL 328
Query: 188 TAHLHTRDKAKALAKALG-YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
L + ++ K + L FQK C + VT+NIL+ Q VD+V L +++
Sbjct: 329 KG-LCSAERWKEAEELLSEMFQK-----DCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 382
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
PD+ TY V++ + K G+I E +L M S CKP+ +++ +++ +
Sbjct: 383 LSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRW 442
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
E++ ++ P TFN++I K L +A + ++M +P I+Y +
Sbjct: 443 VDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTV 502
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I G A E+ + + G +++ A G + +F+N + +
Sbjct: 503 IDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTI 562
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
D+ Y + + K + M NG +PN+ + ++ +S
Sbjct: 563 RSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLAS 613
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 127/335 (37%), Gaps = 40/335 (11%)
Query: 180 PSVYNAL-ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
P+ Y + L TR + +A AL +M + C P Y+++L A ++
Sbjct: 109 PNAYTFFPVVRGLCTRGR---IADALEVLDEMS-FKGCAPIPPMYHVILEAACRSGGFRN 164
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+ + +H D N V++A + G + E +L ++ C+ DI+++N ++
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
+ + +E++ ++ P + TFN++I + L + V +M+ TP
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284
Query: 359 SFITYECII-------------------TMYGYCDNV----------------SRAREIF 383
Y II YG NV A E+
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
E+ + + T N +++ +C NGL L E + G PD TY + + K
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ + LLK M G PN + L+ S+
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA 439
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 94/230 (40%), Gaps = 4/230 (1%)
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
+ P+ YT+ V+ G I + VL M C P +++++++ + F
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 311 QVFKSLMHSKEKPTLPTFN-SMIIN-YGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+V ++ MH+K TL T N ++++N + +A + +K+ ++Y ++
Sbjct: 167 RVLEA-MHAK-GCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
E+ DE+ ++ + T N ++ C NGL + G TP
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
D Y + K E+ ++L RM G+ PN + L+ S+
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSA 334
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 144/326 (44%), Gaps = 13/326 (3%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLH--TRDKAKALAKAL 204
+Y ++ + G R ++ + M GC D N ++ A D+A L + L
Sbjct: 148 MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKL 207
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
+F C+ +IV+YN +L+ A+ V L E+ AP+I T+N ++
Sbjct: 208 AFFG-------CEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGY 260
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+NG+ + + VL++M + C PDI + +ID K + ++ + KP
Sbjct: 261 LCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPN 320
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN--VSRAREI 382
+ +N+++ A +AE + +M +T+ ++ +C N V R E+
Sbjct: 321 VVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF--FCQNGLVDRVIEL 378
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+++ G V T ++ +C GL EA +L ++ + G P++ +Y ++ K
Sbjct: 379 LEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCS 438
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFF 468
A ++L+ +M Q G PN F
Sbjct: 439 AGRWVDAEELMSQMIQQGCPPNPVTF 464
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 165/396 (41%), Gaps = 53/396 (13%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ E +S + + V M + + DTG + ++ + ++G A+ L ++
Sbjct: 151 VILEAACRSGGFRNSVRVLEAMHAKGCTL-DTGNCNLVLNAICEQGCVDEAVGLLRKLAF 209
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQK-MKGMER--CKPNIVTYNILLRAC 230
GC D YNA++ K +AK G ++ M M R C PNIVT+N L+
Sbjct: 210 FGCEADIVSYNAVL--------KGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYL 261
Query: 231 AQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMI------------------- 271
+ ++V+ + ++ E PDI Y ++D K G +
Sbjct: 262 CRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNV 321
Query: 272 ----------------KEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKS 315
KE E +LS M C D +TFN+L+D + + D++ ++ +
Sbjct: 322 VCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQ 381
Query: 316 LMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDN 375
++ P + T+ ++I + K L +A + + M++ P+ ++Y I + G C +
Sbjct: 382 MLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYT--IVLKGLC-S 438
Query: 376 VSR---AREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSST 432
R A E+ ++ + G T N ++ C GL +A L + G +PD +
Sbjct: 439 AGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 498
Query: 433 YKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
Y + KA E +LL M GI PN +
Sbjct: 499 YSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIY 534
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 172/411 (41%), Gaps = 27/411 (6%)
Query: 68 SKRGRKSEELESKELVRVLMRSFSDKEPLVRTLNKYVKVVRSEHCFLLFEELGKSDKWLQ 127
+KR EEL E+VRV D P + T N + + LFE +
Sbjct: 229 AKRWGDVEEL-MDEMVRV------DCAPNIVTFNTLIGYLCRNG---LFERVH------- 271
Query: 128 CLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALI 187
EV M + D +Y+ +I + K+G +A + + M + G +P+ YN ++
Sbjct: 272 --EVLAQMS-EHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVL 328
Query: 188 TAHLHTRDKAKALAKALG-YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
L + ++ K + L FQK C + VT+NIL+ Q VD+V L +++
Sbjct: 329 KG-LCSAERWKEAEELLSEMFQK-----DCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 382
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAF 306
PD+ TY V++ + K G+I E +L M S CKP+ +++ +++ +
Sbjct: 383 LSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRW 442
Query: 307 DKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECI 366
E++ ++ P TFN++I K L +A + ++M +P I+Y +
Sbjct: 443 VDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTV 502
Query: 367 ITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGV 426
I G A E+ + + G +++ A G + +F+N + +
Sbjct: 503 IDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTI 562
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSS 477
D+ Y + + K + M NG +PN+ + ++ +S
Sbjct: 563 RSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLAS 613
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 127/335 (37%), Gaps = 40/335 (11%)
Query: 180 PSVYNAL-ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
P+ Y + L TR + +A AL +M + C P Y+++L A ++
Sbjct: 109 PNAYTFFPVVRGLCTRGR---IADALEVLDEMS-FKGCAPIPPMYHVILEAACRSGGFRN 164
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
+ + +H D N V++A + G + E +L ++ C+ DI+++N ++
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
+ + +E++ ++ P + TFN++I + L + V +M+ TP
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284
Query: 359 SFITYECII-------------------TMYGYCDNV----------------SRAREIF 383
Y II YG NV A E+
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344
Query: 384 DELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
E+ + + T N +++ +C NGL L E + G PD TY + + K
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404
Query: 444 NMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ + LLK M G PN + L+ S+
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSA 439
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 94/230 (40%), Gaps = 4/230 (1%)
Query: 251 LAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKME 310
+ P+ YT+ V+ G I + VL M C P +++++++ + F
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166
Query: 311 QVFKSLMHSKEKPTLPTFN-SMIIN-YGKARLQGKAEYVFQKMTAMKYTPSFITYECIIT 368
+V ++ MH+K TL T N ++++N + +A + +K+ ++Y ++
Sbjct: 167 RVLEA-MHAK-GCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224
Query: 369 MYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTP 428
E+ DE+ ++ + T N ++ C NGL + G TP
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284
Query: 429 DSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
D Y + K E+ ++L RM G+ PN + L+ S+
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSA 334
>gi|255661202|gb|ACU25770.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 426
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 154/327 (47%), Gaps = 5/327 (1%)
Query: 137 KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDK 196
++R D YS LI GK+G A+ +M D +Y+ LI D
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDY 60
Query: 197 AKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIY 256
++A++ F ++K P++V YN ++ +A+ + AL E+ + + PD
Sbjct: 61 SRAIS----IFSRLK-RSGIAPDLVAYNSMINVFGKAKLFREARALVSEMRTAGVMPDTV 115
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+Y ++ Y +N E S+ S M+ QC D+ T N++ID YG+ + +++F S+
Sbjct: 116 SYCTLLTMYVENQKFLEALSLFSEMREIQCSFDLTTCNIMIDVYGQLGMAKEADKLFWSM 175
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
+P + ++N+++ YG A L G+A ++F+ M + +TY ++ +YG
Sbjct: 176 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMVIYGKTLEH 235
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A + E+ G + T + ++ + G A +LF+ G+ D Y+ +
Sbjct: 236 EKANNLIQEMQDRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRCSGIEIDQVLYQTM 295
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVP 463
AY +A + ++LL+ +++ +P
Sbjct: 296 IVAYERAGLVAHAKRLLQELKRPDNIP 322
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 108/217 (49%)
Query: 248 ESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFD 307
E L+PD YTY+ ++ +GK G+ + S L +M+ ++ D++ ++ LI+ K +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 308 KMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECII 367
+ +F L S P L +NSMI +GKA+L +A + +M P ++Y ++
Sbjct: 62 RAISIFSRLKRSGIAPDLVAYNSMINVFGKAKLFREARALVSEMRTAGVMPDTVSYCTLL 121
Query: 368 TMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVT 427
TMY A +F E+ ++ ++T N M++ Y G+ EAD LF + MG+
Sbjct: 122 TMYVENQKFLEALSLFSEMREIQCSFDLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGIE 181
Query: 428 PDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
P+ +Y L + Y A + L + M++ I N
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQN 218
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 127/327 (38%), Gaps = 69/327 (21%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D Y+ +I V GK R A L SEMR +G PD Y L+T ++ + +A
Sbjct: 78 DLVAYNSMINVFGKAKLFREARALVSEMRTAGVMPDTVSYCTLLTMYVEN----QKFLEA 133
Query: 204 LGYFQKMK---------------------GMER-------------CKPNIVTYNILLRA 229
L F +M+ GM + +PN+V+YN LLR
Sbjct: 134 LSLFSEMREIQCSFDLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGIEPNVVSYNTLLRV 193
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
A + LF+ + + ++ TYN +M YGK ++ +++ M+ +P+
Sbjct: 194 YGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMVIYGKTLEHEKANNLIQEMQDRGIEPN 253
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAE---- 345
IT++ +I +GK D+ +F+ L S + + +MI+ Y +A L A+
Sbjct: 254 AITYSTIISIWGKVGKLDRAAMLFQKLRCSGIEIDQVLYQTMIVAYERAGLVAHAKRLLQ 313
Query: 346 ---------------------------YVFQKMTAMKYTPSFITYECIITMYGYCDNVSR 378
+VF++ +E +I ++
Sbjct: 314 ELKRPDNIPRDTAIHILAGAGRIEEATWVFRQAVEAGEVKDITVFERMINLFSKHKKYPN 373
Query: 379 AREIFDELSKLGKDMKVSTLNAMLEAY 405
E+FD++ LG + + +L AY
Sbjct: 374 VVEVFDKMRGLGYFPHSNVIALVLNAY 400
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 126/301 (41%), Gaps = 37/301 (12%)
Query: 121 KSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDP 180
++ K+L+ L +F M++ + D + +I V G+ G + A LF MR G P+
Sbjct: 126 ENQKFLEALSLFSEMREIQCSF-DLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGIEPNV 184
Query: 181 SVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVN 240
YN L+ + A+ +A+ F+ M+ + + N+VTYN ++ + ++ N
Sbjct: 185 VSYNTLLRVY----GDAELFGEAIHLFRLMQ-RKNIEQNVVTYNSMMVIYGKTLEHEKAN 239
Query: 241 ALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSY 300
L +E+ + + P+ TY+ ++ +GK G + + +++ + + D + + +I +Y
Sbjct: 240 NLIQEMQDRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRCSGIEIDQVLYQTMIVAY 299
Query: 301 --------GKR--------------------QAFDKMEQ---VFKSLMHSKEKPTLPTFN 329
KR ++E+ VF+ + + E + F
Sbjct: 300 ERAGLVAHAKRLLQELKRPDNIPRDTAIHILAGAGRIEEATWVFRQAVEAGEVKDITVFE 359
Query: 330 SMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKL 389
MI + K + VF KM + Y P ++ YG +A ++ E+
Sbjct: 360 RMINLFSKHKKYPNVVEVFDKMRGLGYFPHSNVIALVLNAYGKLHEFDKANSVYMEMQDE 419
Query: 390 G 390
G
Sbjct: 420 G 420
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 169/415 (40%), Gaps = 69/415 (16%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
++ E L +S K+ L++F+ M + D +Y + + K G +LAM LF M+
Sbjct: 36 MIVESLVESKKFDNVLDLFKEMVGL-GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKR 94
Query: 174 SGCRPDPSVYNALITA---HLHTRD----------------------------KAKALAK 202
P+ VYN LI RD KA +
Sbjct: 95 RKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDV 154
Query: 203 ALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
A+G ++MK E+ +P+I+T+N LL +AR +++ + E+ + PD +TY+ +
Sbjct: 155 AIGLRERMK-KEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIF 213
Query: 263 D------------------AYGK-------------NGMIKE-----MESVLSRMKSNQC 286
D A GK NG+ KE E VL + +
Sbjct: 214 DGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGL 273
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
P + +N +++ Y + D+ + + +P FNS+I + + ++ KAE
Sbjct: 274 VPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEE 333
Query: 347 VFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYC 406
+KM PS TY +I YG SR +I +E+ + G+ V + +++ C
Sbjct: 334 WVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLC 393
Query: 407 MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGI 461
+G EA+++ + GV P+++ Y +L + M +NGI
Sbjct: 394 KDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGI 448
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 155/357 (43%), Gaps = 41/357 (11%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALA----KA 203
++ L++ + K + A + +E++ +G PD Y+ + L + D A A +A
Sbjct: 174 FNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREA 233
Query: 204 LGYFQK---------MKGMERCK--------------------PNIVTYNILLRACAQAR 234
+G K + G+ CK P V YN ++ Q
Sbjct: 234 IGKGVKIDNYTCSILLNGL--CKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIG 291
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
++D+ +++ L P+ +N V+D + + MI + E + +M P + T+N
Sbjct: 292 DMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYN 351
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+LID YG+ F + Q+ + + + EKP + ++ S+I K +AE V + M
Sbjct: 352 ILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGR 411
Query: 355 KYTPSFITYECIITMYGYCDNVSRARE---IFDELSKLGKDMKVSTLNAMLEAYCMNGLP 411
P+ Y +I G C V + RE FDE+SK G + T N++++ C G
Sbjct: 412 GVLPNANIYNMLID--GSC-TVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKL 468
Query: 412 TEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
EA+ +F + G PD TY L Y+ A + +L + M++ G+ P F
Sbjct: 469 KEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTF 525
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 143/319 (44%), Gaps = 10/319 (3%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI G+ + EM +G +P+ Y +LI K + +A
Sbjct: 350 YNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLC----KDGKILEAEMVL 405
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGK 267
+ M G PN YN+L+ + + F E+ ++ + I TYN ++ K
Sbjct: 406 RDMVG-RGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCK 464
Query: 268 NGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPT 327
G +KE E + + S PD+IT+N LI Y K ++++++ KPT+ T
Sbjct: 465 MGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINT 524
Query: 328 FNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELS 387
F+ +I K ++ K E +F +M M +P + Y +I Y +V +A + E+
Sbjct: 525 FHPLISGCSKEGIKLK-ETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMV 583
Query: 388 KLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKE 447
+G T N+++ + G +E L ++ G+ P++ TY LL + + ++K+
Sbjct: 584 DMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGH--CDLKD 641
Query: 448 LVQKLL--KRMEQNGIVPN 464
+ + M +NG +PN
Sbjct: 642 FNGAYVWYREMLENGFLPN 660
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 134/312 (42%), Gaps = 10/312 (3%)
Query: 167 LFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNIL 226
L+ MR G P ++ + + + K L F++M G+ +P+ + Y
Sbjct: 18 LYDFMRQEGRLPSFGYVRMIVESLVES----KKFDNVLDLFKEMVGLGF-RPDKLVYGRA 72
Query: 227 LRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQC 286
+ A + ++ LF+ + + P+++ YN ++ K I++ E + M
Sbjct: 73 MLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNL 132
Query: 287 KPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEY 346
P+ +TFN LID Y K D + + + K +P++ TFNS++ KAR +A
Sbjct: 133 VPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARC 192
Query: 347 VFQKMTAMKYTPSFITYECIIT-MYGYCDNVSRAREIFDELSKLGKDMKVS--TLNAMLE 403
+ ++ + P TY I + D A +++ E +GK +K+ T + +L
Sbjct: 193 MLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYRE--AIGKGVKIDNYTCSILLN 250
Query: 404 AYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVP 463
C G +A+ + ++ G+ P Y + Y + + +++ME G+ P
Sbjct: 251 GLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRP 310
Query: 464 NKRFFLEALETF 475
N F ++ F
Sbjct: 311 NCIAFNSVIDKF 322
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 132/319 (41%), Gaps = 30/319 (9%)
Query: 119 LGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRP 178
L K K L+ V R M R + + IY+ LI G+ R A+ F EM +G
Sbjct: 392 LCKDGKILEAEMVLRDMVG-RGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGA 450
Query: 179 DPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQ 238
YN+LI K L +A F + C P+++TYN L+ + A N +
Sbjct: 451 TIVTYNSLIKGLC----KMGKLKEAEEMFFLITSTGHC-PDVITYNSLISGYSNAGNSQK 505
Query: 239 VNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLID 298
L++ + + L P I T++ ++ K G IK E++ + M PD + +N +I
Sbjct: 506 CLELYETMKKLGLKPTINTFHPLISGCSKEG-IKLKETLFNEMLQMNLSPDRVVYNAMIH 564
Query: 299 SYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTP 358
Y + K + K ++ +P T+NS+I+ + K + + + M A P
Sbjct: 565 CYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIP 624
Query: 359 SFITYECIITMYGYCD---------------------NVSRAREIFDELSKLGKDMKVST 397
TY +I G+CD NV E+ L K G+ + +
Sbjct: 625 EADTYSLLIQ--GHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQS 682
Query: 398 LNAMLEAYCMNGLPTEADL 416
+ + + A M+ L T DL
Sbjct: 683 ICSEMIANGMDNLDTNEDL 701
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 109/240 (45%), Gaps = 9/240 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L + L K K + E+F ++ + D Y+ LI+ G ++ + L+ M+
Sbjct: 458 LIKGLCKMGKLKEAEEMF-FLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKL 516
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G +P + ++ LI+ K K F +M M P+ V YN ++ +
Sbjct: 517 GLKPTINTFHPLISGCSKEGIKLKET-----LFNEMLQM-NLSPDRVVYNAMIHCYQETG 570
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+V + +L KE+ + + PD TYN ++ + K G + E + ++ MK+ P+ T++
Sbjct: 571 HVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYS 630
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK-ARLQGKAEYVFQKMTA 353
LLI + + F+ ++ ++ + P + N + K RLQ +A+ + +M A
Sbjct: 631 LLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQ-EAQSICSEMIA 689
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 163/359 (45%), Gaps = 8/359 (2%)
Query: 127 QCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNAL 186
+ LEV++ M + YS L+ GK+ +WL EM G +P+ Y
Sbjct: 257 EALEVYKVMMVD-GVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSY--- 312
Query: 187 ITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKEL 246
T + +A+ +A +M+ E CKP+++T+ +L++ A + +F ++
Sbjct: 313 -TICIRVLGQARRFDEAYRILAEMEN-EGCKPDVITHTVLIQVLCDAGRISDAKDVFWKM 370
Query: 247 HESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGK-RQA 305
+S PD TY ++D + NG + + + + MK++ +++ + +ID+ + +
Sbjct: 371 KKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRV 430
Query: 306 FDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYEC 365
F+ +E +F + P ++NS+I + KA G A +F+ M P+ T+
Sbjct: 431 FEALE-MFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVL 489
Query: 366 IITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMG 425
I YG +A + ++ + G V NA+L +G A +F MG
Sbjct: 490 FINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMG 549
Query: 426 VTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSSLAGSQS 484
V+PD+ TY ++ K +KA+ + K+ M +N VP+ ++T + G ++
Sbjct: 550 VSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEA 608
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 144/322 (44%), Gaps = 9/322 (2%)
Query: 145 TGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKAL 204
TG Y+ LI + + +A LF+EM+ GC PD YN L+ A K+ + + L
Sbjct: 834 TGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDA----MGKSMRIEEML 889
Query: 205 GYFQKM--KGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
++M KG E VTYN ++ ++R ++Q L+ L +P TY ++
Sbjct: 890 KVQEEMHRKGYES---TYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLL 946
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
D K G I++ E++ + M CK + +N+L++ + +K+ +F+ ++
Sbjct: 947 DGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGIN 1006
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
P + ++ +I KA F+++ M P ITY +I G + A +
Sbjct: 1007 PDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSL 1066
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
F+E+ K G + T N+++ G EA ++E G P+ TY L + Y+
Sbjct: 1067 FNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSV 1126
Query: 443 ANMKELVQKLLKRMEQNGIVPN 464
+ + RM G +PN
Sbjct: 1127 SGSTDSAYAAYGRMIVGGCLPN 1148
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 130/258 (50%), Gaps = 8/258 (3%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
LL + +GKS + + L+V M + + Y + Y+ +I+ + K + A+ L+ + +
Sbjct: 874 LLLDAMGKSMRIEEMLKVQEEMHR-KGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMS 932
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGME-RCKPNIVTYNILLRACAQ 232
G P P Y L+ L KA + A F +M +E CK N YNILL
Sbjct: 933 QGFSPTPCTYGPLLDGLL----KAGRIEDAENLFNEM--LEYGCKANCTIYNILLNGHRI 986
Query: 233 ARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIIT 292
A N ++V LF+++ + + PDI +Y ++D K G + + + ++ +PD+IT
Sbjct: 987 AGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLIT 1046
Query: 293 FNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMT 352
+NLLID GK + ++ +F + P L T+NS+I++ GKA +A +++++
Sbjct: 1047 YNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELL 1106
Query: 353 AMKYTPSFITYECIITMY 370
+ P+ TY +I Y
Sbjct: 1107 TKGWKPNVFTYNALIRGY 1124
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 179/406 (44%), Gaps = 15/406 (3%)
Query: 65 RPRSKRGRKSEELESKELVRVLMRSFSDKEPL--VRTLNKYVKVVRS-EHCFLLFEELGK 121
R R + + E +++++ L + E L R+ + +VV + C + + +
Sbjct: 122 RARVQPPPRDERRAAEDVIHALRSADGPAEALERFRSAARRPRVVHTTASCNYMLDLMRD 181
Query: 122 SDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPS 181
+ EVF MQ+Q A+ G ++ + +G +G R A M+ +G +
Sbjct: 182 HGRVGDMAEVFDVMQRQ-IVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAY 240
Query: 182 VYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNA 241
YN L+ + + +AL K+ ++ P++ TY++L+ A + R+V+ V
Sbjct: 241 TYNGLVYFLVKSGFDREALE-----VYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLW 295
Query: 242 LFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYG 301
L +E+ + P++Y+Y + G+ E +L+ M++ CKPD+IT +LI
Sbjct: 296 LLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLC 355
Query: 302 KRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMK---YTP 358
+ VF + S +KP T+ +++ + G+++ V + AMK Y
Sbjct: 356 DAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFAD---NGESQSVMEIWNAMKADGYND 412
Query: 359 SFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLF 418
+ + Y +I V A E+FDE+ + G + + N+++ + +A LF
Sbjct: 413 NVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELF 472
Query: 419 ENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ G P+ T+ L Y K+ + + M+ GIVP+
Sbjct: 473 KYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPD 518
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 144/329 (43%), Gaps = 8/329 (2%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
L ++ + + +E++ M K Y + Y+ +I + + G+ A+ +F EM+
Sbjct: 385 LLDKFADNGESQSVMEIWNAM-KADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQK 443
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
G P+ YN+LI+ L KA AL F+ M + KPN T+ + + ++
Sbjct: 444 GIVPEQYSYNSLISGFL----KADRFGDALELFKYMD-IHGPKPNGYTHVLFINYYGKSG 498
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
+ ++ + + PD+ N V+ K+G + + V +K+ PD IT+
Sbjct: 499 ESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYT 558
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
++I K FD+ ++F ++ + P + NS+I KA +A +F ++ M
Sbjct: 559 MMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEM 618
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
P+ TY ++ G V + +E+ + T N +L+ C NG +A
Sbjct: 619 NLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDA 678
Query: 415 -DLLFENSHNMGVTPDSSTYKLLYKAYTK 442
D+L+ + G PD S+Y + K
Sbjct: 679 LDMLYSMT-TKGCIPDLSSYNTVIYGLVK 706
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 168/429 (39%), Gaps = 61/429 (14%)
Query: 82 LVRVLMRSFSDKEPL----VRTLNKYVKVVRSEHCFLLFEELGKSDKWLQCLEVFRWMQK 137
LV L++S D+E L V ++ V VR+ +L GK L + R M+
Sbjct: 245 LVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYS--VLMVAFGKRRDVETVLWLLREMEA 302
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKA 197
+ Y+ I V+G+ + A + +EM N GC+PD + LI A
Sbjct: 303 H-GVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLC----DA 357
Query: 198 KALAKALGYFQKMKGMERCKP-----------------------------------NIVT 222
++ A F KMK ++ KP N+V
Sbjct: 358 GRISDAKDVFWKMKKSDQ-KPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVA 416
Query: 223 YNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMK 282
Y ++ A Q V + +F E+ + + P+ Y+YN ++ + K + + M
Sbjct: 417 YTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMD 476
Query: 283 SNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQG 342
+ KP+ T L I+ YGK K Q ++ + P + N+++ K+ G
Sbjct: 477 IHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLG 536
Query: 343 KAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM-------KV 395
A+ VF ++ AM +P ITY +I C S+ FDE K+ DM V
Sbjct: 537 MAKRVFHELKAMGVSPDTITYTMMIKC---CSKASK----FDEAVKIFYDMIENNCVPDV 589
Query: 396 STLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKR 455
+N++++ G EA +F M + P TY L + + V LL+
Sbjct: 590 LVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEE 649
Query: 456 MEQNGIVPN 464
M + PN
Sbjct: 650 MYHSNYPPN 658
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 19/300 (6%)
Query: 121 KSDKWLQCLEVFRWMQ----KQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGC 176
K+D++ LE+F++M K Y + I GK G++ A+ + M++ G
Sbjct: 461 KADRFGDALELFKYMDIHGPKPNGYT-----HVLFINYYGKSGESIKAIQRYELMKSKGI 515
Query: 177 RPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
PD NA+ L K+ L A F ++K M P+ +TY ++++ C++A
Sbjct: 516 VPDVVAGNAV----LFGLAKSGRLGMAKRVFHELKAMG-VSPDTITYTMMIKCCSKASKF 570
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
D+ +F ++ E+ PD+ N ++D K G E + ++K +P T+N L
Sbjct: 571 DEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTL 630
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
+ G+ ++ + + + HS P L T+N+++ K A + MT
Sbjct: 631 LAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGC 690
Query: 357 TPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDM--KVSTLNAMLEAYCMNGLPTEA 414
P +Y +I YG R E F ++ K + +TL +L ++ GL EA
Sbjct: 691 IPDLSSYNTVI--YGLVKE-ERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEA 747
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 84/222 (37%), Gaps = 35/222 (15%)
Query: 257 TYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSL 316
+YN ++ +I E + + MK C PD T+NLL+D+ GK ++M +V +
Sbjct: 836 SYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKV-QEE 894
Query: 317 MHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNV 376
MH K Y +++TY II+ +
Sbjct: 895 MHRK----------------------------------GYESTYVTYNTIISGLVKSRRL 920
Query: 377 SRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLL 436
+A +++ L G T +L+ G +A+ LF G + + Y +L
Sbjct: 921 EQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNIL 980
Query: 437 YKAYTKANMKELVQKLLKRMEQNGIVPNKRFFLEALETFSSS 478
+ A E V L + M GI P+ + + ++T +
Sbjct: 981 LNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKA 1022
>gi|449507908|ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
mitochondrial-like [Cucumis sativus]
Length = 685
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 167/402 (41%), Gaps = 38/402 (9%)
Query: 85 VLMRSFSDKEPLVRTLNKYVKVVRSEHC-------FLLFEELGKSDKWLQCLEVFRWMQK 137
+L+ + + E L R+ K K ++ +HC ++ GK + + L +F M
Sbjct: 274 MLLDALAKDEQLDRSY-KVFKDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEML- 331
Query: 138 QRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVY-------------- 183
+ + Y+ +I + K G A+ LF M + CRP+ Y
Sbjct: 332 TKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQLG 391
Query: 184 -------------NALITAHL-HTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA 229
N I A+L T K ++A F M ++L
Sbjct: 392 RLDEVLEVSNKFINKSIYAYLVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAYISMLESL 451
Query: 230 CAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPD 289
C + V+ + L ++HE ++ D YN V+ GK + + + +MK + PD
Sbjct: 452 CRGGKTVEAIE-LLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPD 510
Query: 290 IITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQ 349
I T+N+LI S G+ + +VF+ L S KP + ++NS+I GK +A F
Sbjct: 511 IFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAHMRFL 570
Query: 350 KMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNG 409
+M P +TY +I +G D V AR +FD + G + T N +L+ G
Sbjct: 571 EMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCLERAG 630
Query: 410 LPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQK 451
E L+ G+TPDS TY +L + + +N K V++
Sbjct: 631 RTAETVDLYAKLREQGLTPDSITYAILDRLQSGSNRKFRVRR 672
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 157/384 (40%), Gaps = 40/384 (10%)
Query: 114 LLFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRN 173
+L + L K ++ + +VF+ M K + D Y+ +I + GK G+ ++ LF EM
Sbjct: 274 MLLDALAKDEQLDRSYKVFKDM-KLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLT 332
Query: 174 SGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQA 233
GC P+ YN +I A K+ + KA+ F M C+PN TY+I+L
Sbjct: 333 KGCTPNLIAYNTMIQA----LSKSGMVDKAILLFCNMIK-NNCRPNEFTYSIILNVLVAE 387
Query: 234 RNVDQVNALFKELHESILAPDIYTY--------------------------NGVMDAY-- 265
+ +++ + E+ + IY Y G DAY
Sbjct: 388 GQLGRLDEVL-EVSNKFINKSIYAYLVRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAYIS 446
Query: 266 -----GKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSK 320
+ G E +LS++ D + +N ++ + GK + + +++ +
Sbjct: 447 MLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDG 506
Query: 321 EKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAR 380
P + T+N +I + G+ +A VF+++ + P I+Y +I G +V A
Sbjct: 507 PFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDIISYNSLINCLGKNGDVDEAH 566
Query: 381 EIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAY 440
F E+ G + V T + ++E + A LF+ G P+ TY +L
Sbjct: 567 MRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRMITQGCCPNIVTYNILLDCL 626
Query: 441 TKANMKELVQKLLKRMEQNGIVPN 464
+A L ++ + G+ P+
Sbjct: 627 ERAGRTAETVDLYAKLREQGLTPD 650
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 114/278 (41%), Gaps = 32/278 (11%)
Query: 219 NIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVL 278
N TY LL+A ++R+ D+ ++ E+ + DI+ YN ++DA K+ + V
Sbjct: 233 NAYTYRCLLQAHIRSRDSDRAFNVYMEMWSNGYQLDIFAYNMLLDALAKDEQLDRSYKVF 292
Query: 279 SRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKA 338
MK C PD T+ ++I GK ++ +F+ ++ P L +N+MI K+
Sbjct: 293 KDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKS 352
Query: 339 RLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD-------------- 384
+ KA +F M P+ TY I+ + + R E+ +
Sbjct: 353 GMVDKAILLFCNMIKNNCRPNEFTYSIILNVLVAEGQLGRLDEVLEVSNKFINKSIYAYL 412
Query: 385 --ELSKLGKDMKVSTL----------------NAMLEAYCMNGLPTEADLLFENSHNMGV 426
LSKLG + L +MLE+ C G EA L H G+
Sbjct: 413 VRTLSKLGHSSEAHRLFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLSKVHEKGI 472
Query: 427 TPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
+ D+ Y + K + L ++M+Q+G P+
Sbjct: 473 STDTMMYNTVLSTLGKLKQVSHLHDLYEKMKQDGPFPD 510
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/368 (20%), Positives = 147/368 (39%), Gaps = 72/368 (19%)
Query: 164 AMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTY 223
A ++ EM ++G + D YN L+ A K + L ++ F+ MK ++ C P+ TY
Sbjct: 253 AFNVYMEMWSNGYQLDIFAYNMLLDALA----KDEQLDRSYKVFKDMK-LKHCNPDEYTY 307
Query: 224 NILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKS 283
I++R + ++ ALF+E+ P++ YN ++ A K+GM+ + + M
Sbjct: 308 TIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKSGMVDKAILLFCNMIK 367
Query: 284 NQCKPDIITFNLLIDSYGKRQAFDKMEQVFK-------------------SLMHSKEKPT 324
N C+P+ T++++++ ++++V + L HS E
Sbjct: 368 NNCRPNEFTYSIILNVLVAEGQLGRLDEVLEVSNKFINKSIYAYLVRTLSKLGHSSEAHR 427
Query: 325 L-------------PTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYG 371
L + SM+ + + +A + K+ + + Y +++ G
Sbjct: 428 LFCNMWSFHDGGDRDAYISMLESLCRGGKTVEAIELLSKVHEKGISTDTMMYNTVLSTLG 487
Query: 372 YCDNVSRAREIFDE----------------LSKLGKDMKVS------------------- 396
VS +++++ +S LG+ KV
Sbjct: 488 KLKQVSHLHDLYEKMKQDGPFPDIFTYNILISSLGRVGKVKEAVEVFEELESSDCKPDII 547
Query: 397 TLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
+ N+++ NG EA + F + G+ PD TY L + + K + E+ + L RM
Sbjct: 548 SYNSLINCLGKNGDVDEAHMRFLEMQDKGLNPDVVTYSTLIECFGKTDKVEMARSLFDRM 607
Query: 457 EQNGIVPN 464
G PN
Sbjct: 608 ITQGCCPN 615
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 83/202 (41%), Gaps = 17/202 (8%)
Query: 271 IKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNS 330
I ++ +LS+M +Q + I T N+LI + + + + K + T+
Sbjct: 183 IDQVREILSQMDRDQIRGTISTVNILIKIFSSNEDLELCTGLIKKW---DLRLNAYTYRC 239
Query: 331 MIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
++ + ++R +A V+ +M + Y Y ++ + + R+ ++F
Sbjct: 240 LLQAHIRSRDSDRAFNVYMEMWSNGYQLDIFAYNMLLDALAKDEQLDRSYKVF------- 292
Query: 391 KDMKVSTLNA-------MLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKA 443
KDMK+ N M+ G E+ LFE G TP+ Y + +A +K+
Sbjct: 293 KDMKLKHCNPDEYTYTIMIRMTGKMGRAEESLALFEEMLTKGCTPNLIAYNTMIQALSKS 352
Query: 444 NMKELVQKLLKRMEQNGIVPNK 465
M + L M +N PN+
Sbjct: 353 GMVDKAILLFCNMIKNNCRPNE 374
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 138/324 (42%), Gaps = 9/324 (2%)
Query: 147 IYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGY 206
IY+ LI K G LA LF +M G P+ Y+ L+ + +
Sbjct: 195 IYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREG------- 247
Query: 207 FQKMKGMERCK--PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
FQ + M R PN YN L+ VD+ +F E+ E +A + TYN ++
Sbjct: 248 FQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGG 307
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
+ E ++ ++ P+I+T+N+LI+ + D ++F L S PT
Sbjct: 308 LCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPT 367
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREIFD 384
L T+N++I Y K A + ++M S +TY +I + + +A E+
Sbjct: 368 LVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHS 427
Query: 385 ELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKAN 444
+ K G V T + ++ C+NG EA F++ M + P+S Y + Y K
Sbjct: 428 LMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEG 487
Query: 445 MKELVQKLLKRMEQNGIVPNKRFF 468
+LL M +G+VPN F
Sbjct: 488 SSYRALRLLNEMVHSGMVPNVASF 511
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 134/302 (44%), Gaps = 25/302 (8%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKALGYF 207
Y+ LI+ G A +F+EMR G YN LI + K +A+
Sbjct: 266 YNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGG----LCRGKKFGEAVKLV 321
Query: 208 QKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAY-- 265
K+ + PNIVTYNIL+ +D LF +L S L+P + TYN ++ Y
Sbjct: 322 HKVNKVGL-SPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSK 380
Query: 266 -----GKNGMIKEMES-VLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHS 319
G ++KEME ++R K +T+ +LID++ + DK ++ + S
Sbjct: 381 VENLAGALDLVKEMEERCIARSK--------VTYTILIDAFARLNYTDKACEMHSLMEKS 432
Query: 320 KEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVS-- 377
P + T++ +I +A F+ + M P+ + Y +I +GYC S
Sbjct: 433 GLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMI--HGYCKEGSSY 490
Query: 378 RAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLY 437
RA + +E+ G V++ + + C + EA+LL N G+ P S YK+++
Sbjct: 491 RALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVH 550
Query: 438 KA 439
K
Sbjct: 551 KV 552
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 115/250 (46%), Gaps = 6/250 (2%)
Query: 218 PNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESV 277
PN+V Y L+ C + +V LF ++ L P+ +TY+ +M+ + K G+ +E +
Sbjct: 191 PNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQM 250
Query: 278 LSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGK 337
M + P+ +N LI Y DK +VF + + T+N +I +
Sbjct: 251 YENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCR 310
Query: 338 ARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCD--NVSRAREIFDELSKLGKDMKV 395
+ G+A + K+ + +P+ +TY +I G+CD + A +F++L G +
Sbjct: 311 GKKFGEAVKLVHKVNKVGLSPNIVTYNILIN--GFCDVGKMDTAVRLFNQLKSSGLSPTL 368
Query: 396 STLNAMLEAYC-MNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLK 454
T N ++ Y + L DL+ E + TY +L A+ + N + ++
Sbjct: 369 VTYNTLIAGYSKVENLAGALDLVKEMEERC-IARSKVTYTILIDAFARLNYTDKACEMHS 427
Query: 455 RMEQNGIVPN 464
ME++G+VP+
Sbjct: 428 LMEKSGLVPD 437
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 143/334 (42%), Gaps = 10/334 (2%)
Query: 145 TGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKAL 204
T +Y ++ T A+ M + G P + +N L+ + ++ KA
Sbjct: 89 TPLYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLI----RSNYFDKAW 144
Query: 205 GYFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVMDA 264
F +K + N ++ I++ C +A +V L L E L+P++ Y ++D
Sbjct: 145 WIFNVLK--SKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDG 202
Query: 265 YGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPT 324
KNG + +++ +M P+ T+++L++ + K+ + Q+++++ S P
Sbjct: 203 CCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPN 262
Query: 325 LPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREI 382
+N +I Y + KA VF +M +TY +I G C A ++
Sbjct: 263 AYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIG--GLCRGKKFGEAVKL 320
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+++K+G + T N ++ +C G A LF + G++P TY L Y+K
Sbjct: 321 VHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSK 380
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFFLEALETFS 476
L+K ME+ I +K + ++ F+
Sbjct: 381 VENLAGALDLVKEMEERCIARSKVTYTILIDAFA 414
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 87/214 (40%), Gaps = 21/214 (9%)
Query: 269 GMIKEMESVLSRMKSNQ----------------CKPDIITFNLLIDSYGKRQAFDKMEQV 312
GM+ + +S++ R+ S + C ++ ++++Y + D+
Sbjct: 52 GMLPQAQSLILRLISGRIPSSLMLQLTQAHFTSCSTYTPLYDAIVNAYVHSHSTDQALTF 111
Query: 313 FKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGY 372
++H P TFN+++ ++ KA ++F +K Y I + G
Sbjct: 112 LHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFN---VLKSKVVLNAYSFGIMITGC 168
Query: 373 CDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDS 430
C+ R + L + G V +++ C NG A LF +G+ P+
Sbjct: 169 CEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQ 228
Query: 431 STYKLLYKAYTKANMKELVQKLLKRMEQNGIVPN 464
TY +L + K ++ ++ + M ++GIVPN
Sbjct: 229 HTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPN 262
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 158/370 (42%), Gaps = 50/370 (13%)
Query: 139 RWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAK 198
R D G + ++ + +G A+ L ++ + GC PD YNA++ K
Sbjct: 186 RGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVL--------KGL 237
Query: 199 ALAKALGYFQK-MKGMER--CKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDI 255
+AK G Q+ M+ M R C PNIVT+N L+ + ++V+ + ++ E PDI
Sbjct: 238 CMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDI 297
Query: 256 YTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDI------------------------- 290
Y ++D K G ++ +L+RM S KP++
Sbjct: 298 RMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAE 357
Query: 291 ----------ITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARL 340
+TFN+L+D + + D++ ++ + ++ P + T+ ++I + K L
Sbjct: 358 MFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGL 417
Query: 341 QGKAEYVFQKMTAMKYTPSFITYECIITMYGYC--DNVSRAREIFDELSKLGKDMKVSTL 398
+A + + MTA P+ I+Y I + G C + A ++ ++ + G + T
Sbjct: 418 IDEAVMLLKSMTACGCKPNTISYT--IVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITF 475
Query: 399 NAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQ 458
N ++ C GL +A L + G +PD +Y + KA + +LL M
Sbjct: 476 NTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVN 535
Query: 459 NGIVPNKRFF 468
G+ PN +
Sbjct: 536 KGMSPNTIIY 545
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 149/354 (42%), Gaps = 36/354 (10%)
Query: 148 YSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITA---------------HLH 192
Y ++ + +G+ A+ + EM GC P P +Y+ ++ A LH
Sbjct: 125 YFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLH 184
Query: 193 TRDKA----------------KALAKALGYFQKMKGMERCKPNIVTYNILLRACAQARNV 236
R A ++ +AL + + C+P++V+YN +L+ A+
Sbjct: 185 ARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSF-GCEPDVVSYNAVLKGLCMAKRW 243
Query: 237 DQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLL 296
V L +E+ P+I T+N ++ +NG+ + + VL++M + C PDI + +
Sbjct: 244 GCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATI 303
Query: 297 IDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKY 356
ID K + ++ + KP + +N+++ A + E + +M
Sbjct: 304 IDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDC 363
Query: 357 TPSFITYECIITMYGYCDN--VSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEA 414
+T+ ++ +C N V R E+ +++ + G V T ++ +C GL EA
Sbjct: 364 PLDDVTFNILVDF--FCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEA 421
Query: 415 DLLFENSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRMEQNGIVPNKRFF 468
+L ++ G P++ +Y ++ K A + L+ +M Q G N F
Sbjct: 422 VMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITF 475
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 143/326 (43%), Gaps = 7/326 (2%)
Query: 144 DTGIYSKLIAVMGKKGQTRLAMWLFSEMRNSGCRPDPSVYNALITAHLHTRDKAKALAKA 203
D +Y+ +I + K+G +A + + M + G +P+ YN L+ L + ++ + +
Sbjct: 296 DIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKG-LCSAERWEETEEL 354
Query: 204 LG-YFQKMKGMERCKPNIVTYNILLRACAQARNVDQVNALFKELHESILAPDIYTYNGVM 262
L F K C + VT+NIL+ Q VD+V L +++ E PD+ TY V+
Sbjct: 355 LAEMFDK-----DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVI 409
Query: 263 DAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDSYGKRQAFDKMEQVFKSLMHSKEK 322
+ + K G+I E +L M + CKP+ I++ +++ + + E + ++
Sbjct: 410 NGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCP 469
Query: 323 PTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPSFITYECIITMYGYCDNVSRAREI 382
TFN++I K L +A + ++M +P I+Y +I G A E+
Sbjct: 470 LNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALEL 529
Query: 383 FDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFENSHNMGVTPDSSTYKLLYKAYTK 442
+ + G +++ A G + +F+N + + D+ Y + + K
Sbjct: 530 LNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCK 589
Query: 443 ANMKELVQKLLKRMEQNGIVPNKRFF 468
E + L M +G VPN+ +
Sbjct: 590 RGETERAIEFLAYMVSSGCVPNESTY 615
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 118/277 (42%), Gaps = 14/277 (5%)
Query: 183 YNALITAHLHTR--DKAKALAKALGYFQKMKGMERCKPNIVTYNILLRA-CAQARNVDQV 239
YNA++ + + A+ LA A+ PN TY ++RA CA+ R D +
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAVPV----------PPNAYTYFPVVRALCARGRIADAL 142
Query: 240 NALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNLLIDS 299
A+ E+ AP Y+ +++A + G + VL + + C D+ NL++++
Sbjct: 143 -AVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNA 201
Query: 300 YGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAMKYTPS 359
+ + D+ + + L +P + ++N+++ A+ G + + ++M M P+
Sbjct: 202 ICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPN 261
Query: 360 FITYECIITMYGYCDNVSRAREIFDELSKLGKDMKVSTLNAMLEAYCMNGLPTEADLLFE 419
+T+ +I+ R E+ ++ + G + +++ C G A +
Sbjct: 262 IVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILN 321
Query: 420 NSHNMGVTPDSSTYKLLYKAYTKANMKELVQKLLKRM 456
+ G+ P+ Y L K A E ++LL M
Sbjct: 322 RMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEM 358
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 117/276 (42%), Gaps = 9/276 (3%)
Query: 115 LFEELGKSDKWLQCLEVFRWMQKQRWYIADTGIYSKLIAVMGKKGQTRLAMWLFSEMRNS 174
F + G D+ ++ LE +R + D Y+ +I K+G A+ L M
Sbjct: 376 FFCQNGLVDRVIELLE----QMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTAC 431
Query: 175 GCRPDPSVYNALITAHLHTRDKAKALAKALGYFQKMKGMERCKPNIVTYNILLRACAQAR 234
GC+P+ Y T L A+ A +M + C N +T+N L+ +
Sbjct: 432 GCKPNTISY----TIVLKGLCSAERWVDAEDLMSQMI-QQGCPLNPITFNTLINFLCKKG 486
Query: 235 NVDQVNALFKELHESILAPDIYTYNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFN 294
V+Q L K++ + +PD+ +Y+ V+D GK G E +L+ M + P+ I ++
Sbjct: 487 LVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYS 546
Query: 295 LLIDSYGKRQAFDKMEQVFKSLMHSKEKPTLPTFNSMIINYGKARLQGKAEYVFQKMTAM 354
+ + + +K+ Q+F ++ + + +N++I + K +A M +
Sbjct: 547 SIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSS 606
Query: 355 KYTPSFITYECIITMYGYCDNVSRAREIFDELSKLG 390
P+ TY +I V A+E+ EL G
Sbjct: 607 GCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.130 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,054,718,981
Number of Sequences: 23463169
Number of extensions: 279667570
Number of successful extensions: 2059395
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6090
Number of HSP's successfully gapped in prelim test: 5838
Number of HSP's that attempted gapping in prelim test: 1882742
Number of HSP's gapped (non-prelim): 71403
length of query: 500
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 353
effective length of database: 8,910,109,524
effective search space: 3145268661972
effective search space used: 3145268661972
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)