BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010809
(500 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O80860|FTSH2_ARATH ATP-dependent zinc metalloprotease FTSH 2, chloroplastic
OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1
Length = 695
Score = 837 bits (2161), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/502 (86%), Positives = 460/502 (91%), Gaps = 8/502 (1%)
Query: 1 MEASSACLVGNILTTHKT-KTNLSKDFHGRHLLFNSSFRSLEKKPKVAVVKASLS-QKQH 58
M ASSACLVGN L+ + T K LSK F GR +SF S+ + KV VVKASL +K+
Sbjct: 1 MAASSACLVGNGLSVNTTTKQRLSKHFSGRQ----TSFSSVIRTSKVNVVKASLDGKKKQ 56
Query: 59 EGRRGFLKKLVGNVGVGTALLGSGKAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFEN 118
EGRR FLK L+GN GVG L+ SGKA ADEQGVSSSRMSYSRFLEYLDKDRV KVDL+EN
Sbjct: 57 EGRRDFLKILLGNAGVG--LVASGKANADEQGVSSSRMSYSRFLEYLDKDRVNKVDLYEN 114
Query: 119 GTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIG 178
GTIAIVEA+SPELGNRV+RVRVQLPGLSQELLQK R KNIDFAAHNAQED GS+LFNLIG
Sbjct: 115 GTIAIVEAVSPELGNRVERVRVQLPGLSQELLQKLRAKNIDFAAHNAQEDQGSVLFNLIG 174
Query: 179 NLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDE 238
NLAFP +LIGGLFLLSRRS GGMGGPGGPG PL FGQSKAKFQMEPNTGVTFDDVAGVDE
Sbjct: 175 NLAFPALLIGGLFLLSRRSGGGMGGPGGPGNPLQFGQSKAKFQMEPNTGVTFDDVAGVDE 234
Query: 239 AKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGS 298
AKQDFMEVVEFLKKPERFTA+GA+IPKGVLL+GPPGTGKTLLAKAIAGEAGVPFFSISGS
Sbjct: 235 AKQDFMEVVEFLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGS 294
Query: 299 EFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLL 358
EFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLL
Sbjct: 295 EFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLL 354
Query: 359 TEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKK 418
TEMDGFEGNTG+IV+AATNRADILDSALLRPGRFDRQV+VDVPD++GRT+ILKVH NKK
Sbjct: 355 TEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHAGNKK 414
Query: 419 FDADVSLDVIAMRTPGFSGADLANLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGMEGT 478
FD DVSL++IAMRTPGFSGADLANLLNEAAILAGRR + +ISSKEIDDSIDRIVAGMEGT
Sbjct: 415 FDNDVSLEIIAMRTPGFSGADLANLLNEAAILAGRRARTSISSKEIDDSIDRIVAGMEGT 474
Query: 479 VMTDGKSKSLVAYHEVGHAICG 500
VMTDGKSKSLVAYHEVGHA+CG
Sbjct: 475 VMTDGKSKSLVAYHEVGHAVCG 496
>sp|Q8W585|FTSH8_ARATH ATP-dependent zinc metalloprotease FTSH 8, chloroplastic
OS=Arabidopsis thaliana GN=FTSH8 PE=1 SV=1
Length = 685
Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/502 (85%), Positives = 451/502 (89%), Gaps = 15/502 (2%)
Query: 1 MEASSACLVGNILTTHKTKTNLSKDFHGRHLLFNSSFRSLEKKPKVAVVKASLSQKQHEG 60
M ASSACL+GN L+ + TK K L++ KV VVKASL +K+HEG
Sbjct: 1 MAASSACLLGNGLSVYTTKQRFQK-------------LGLDRTSKVTVVKASLDEKKHEG 47
Query: 61 RRGFLKKLVGNVGVGTALLGSGKAYADE--QGVSSSRMSYSRFLEYLDKDRVKKVDLFEN 118
RRGF K L+GN G LL SG A ADE QGVSSSRMSYSRFLEYLDK RV+KVDL+EN
Sbjct: 48 RRGFFKLLLGNAAAGVGLLASGNANADEQGQGVSSSRMSYSRFLEYLDKGRVEKVDLYEN 107
Query: 119 GTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIG 178
GTIAIVEA+SPELGNR+QRVRVQLPGLSQELLQK R KNIDFAAHNAQED GS + NLIG
Sbjct: 108 GTIAIVEAVSPELGNRIQRVRVQLPGLSQELLQKLRAKNIDFAAHNAQEDQGSPILNLIG 167
Query: 179 NLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDE 238
NLAFP+ILIGGLFLLSRRSSGGMGGPGGPGFPL GQSKAKFQMEPNTGVTFDDVAGVDE
Sbjct: 168 NLAFPVILIGGLFLLSRRSSGGMGGPGGPGFPLQIGQSKAKFQMEPNTGVTFDDVAGVDE 227
Query: 239 AKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGS 298
AKQDFMEVVEFLKKPERFTA+GARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGS
Sbjct: 228 AKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGS 287
Query: 299 EFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLL 358
EFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLL
Sbjct: 288 EFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLL 347
Query: 359 TEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKK 418
TEMDGFEGNTG+IV+AATNRADILDSALLRPGRFDRQV+VDVPD++GRT+ILKVH NKK
Sbjct: 348 TEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHSGNKK 407
Query: 419 FDADVSLDVIAMRTPGFSGADLANLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGMEGT 478
F++ VSL+VIAMRTPGFSGADLANLLNEAAILAGRRGK AISSKEIDDSIDRIVAGMEGT
Sbjct: 408 FESGVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGKTAISSKEIDDSIDRIVAGMEGT 467
Query: 479 VMTDGKSKSLVAYHEVGHAICG 500
VMTDGKSKSLVAYHEVGHAICG
Sbjct: 468 VMTDGKSKSLVAYHEVGHAICG 489
>sp|Q655S1|FTSH2_ORYSJ ATP-dependent zinc metalloprotease FTSH 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=FTSH2 PE=3 SV=1
Length = 676
Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/453 (92%), Positives = 433/453 (95%), Gaps = 1/453 (0%)
Query: 49 VKASLSQKQHEGRRGFLKKLVGNVGVG-TALLGSGKAYADEQGVSSSRMSYSRFLEYLDK 107
V ASL K ++ RR FLK +GN+GVG LLG+ +A A+EQGVSSSRMSYSRFLEYLDK
Sbjct: 31 VTASLEHKTNDARRKFLKLALGNLGVGLPTLLGAKRALAEEQGVSSSRMSYSRFLEYLDK 90
Query: 108 DRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQE 167
DRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQK REKNIDFAAH+ QE
Sbjct: 91 DRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKLREKNIDFAAHSNQE 150
Query: 168 DSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTG 227
DSGSLLFNLIGNLAFPLILIGGLFLLSRR+ GG+GGP GPGFPL FGQS+AKFQMEPNTG
Sbjct: 151 DSGSLLFNLIGNLAFPLILIGGLFLLSRRAQGGLGGPNGPGFPLGFGQSRAKFQMEPNTG 210
Query: 228 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGE 287
VTFDDVAGVDEAKQDFMEVVEFLKKPERFTA+GARIPKGVLLVGPPGTGKTLLAKAIAGE
Sbjct: 211 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 270
Query: 288 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGN 347
AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGN
Sbjct: 271 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGN 330
Query: 348 DEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRT 407
DEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQV+VDVPD+RGRT
Sbjct: 331 DEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVSVDVPDVRGRT 390
Query: 408 EILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILAGRRGKAAISSKEIDDS 467
EILKVHGSNKKFD DVSL+VIAMRTPGFSGADLANLLNEAAILAGRRG+ AISSKEIDDS
Sbjct: 391 EILKVHGSNKKFDTDVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGRTAISSKEIDDS 450
Query: 468 IDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICG 500
IDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICG
Sbjct: 451 IDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICG 483
>sp|O78516|FTSH_GUITH ATP-dependent zinc metalloprotease FtsH OS=Guillardia theta GN=ftsH
PE=3 SV=1
Length = 631
Score = 625 bits (1611), Expect = e-178, Method: Compositional matrix adjust.
Identities = 304/412 (73%), Positives = 348/412 (84%), Gaps = 5/412 (1%)
Query: 89 QGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQE 148
+ ++SSRM+Y RFLEYLD VKKVDL++ G AIVEAI PELGNR+QR+RV+LP + E
Sbjct: 36 KNIASSRMTYGRFLEYLDLGWVKKVDLYDEGHTAIVEAIGPELGNRIQRIRVELPATAPE 95
Query: 149 LLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPG 208
L+ K R+ N+D AH + + + ++LIGNL FP++LI GL L RRSS PGGPG
Sbjct: 96 LITKLRKANVDLDAHATNDSTPA--WSLIGNLIFPILLIAGLAFLFRRSSNL---PGGPG 150
Query: 209 FPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVL 268
+ FG+SKA+FQME TGVTF+DVAGVDEAK++F EVV FLKKPERFTA+GA+IPKGVL
Sbjct: 151 QAMNFGKSKARFQMEAKTGVTFNDVAGVDEAKEEFEEVVSFLKKPERFTAVGAKIPKGVL 210
Query: 269 LVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVF 328
LVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKEN+PCIVF
Sbjct: 211 LVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENSPCIVF 270
Query: 329 VDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 388
+DEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGII+IAATNR D+LD+ALLR
Sbjct: 271 IDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRVDVLDAALLR 330
Query: 389 PGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAA 448
PGRFDRQVTVDVPD++GR EIL VH NKK D +SL++IA RTPGFSGADLANLLNEAA
Sbjct: 331 PGRFDRQVTVDVPDVKGRLEILNVHARNKKLDLSISLELIAKRTPGFSGADLANLLNEAA 390
Query: 449 ILAGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICG 500
IL RR K I+ EID SIDR++AGMEG + D K+K L+AYHEVGHAI G
Sbjct: 391 ILTARRRKKQITISEIDASIDRVIAGMEGKALVDSKTKRLIAYHEVGHAIIG 442
>sp|P51327|FTSH_PORPU ATP-dependent zinc metalloprotease FtsH OS=Porphyra purpurea
GN=ftsH PE=3 SV=1
Length = 628
Score = 618 bits (1593), Expect = e-176, Method: Compositional matrix adjust.
Identities = 304/410 (74%), Positives = 348/410 (84%), Gaps = 5/410 (1%)
Query: 91 VSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELL 150
++SSRM+Y RFLEYLD VK+VDL+EN AIVEA+ PELGNRVQR+RV+LP + EL+
Sbjct: 38 IASSRMTYGRFLEYLDMGWVKRVDLYENNHTAIVEAVGPELGNRVQRIRVELPASAPELI 97
Query: 151 QKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFP 210
K R+ N+D AH + S S ++ L+GNL FPLIL+GGL L RRS+ GGPG
Sbjct: 98 TKLRKANVDLDAHPPK--STSAVWGLLGNLLFPLILVGGLAFLFRRSNNASGGPGQA--- 152
Query: 211 LAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLV 270
++FG+SKA FQME TGV F+DVAGV+EAK++F EVV FLK+PE FTA+GA+IPKGVLLV
Sbjct: 153 MSFGKSKALFQMEAKTGVVFNDVAGVEEAKEEFQEVVTFLKQPESFTAVGAKIPKGVLLV 212
Query: 271 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD 330
GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAK+NAPCIVF+D
Sbjct: 213 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKDNAPCIVFID 272
Query: 331 EIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPG 390
EIDAVGRQRGTG+GGGNDEREQTLNQLLTEMDGFEGNTG+IVIAATNRADILDSALLRPG
Sbjct: 273 EIDAVGRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRADILDSALLRPG 332
Query: 391 RFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAIL 450
RFDRQV+VDVPD RGR IL+VH NKK ++ VSL+ IA RTPGFSGADLANLLNEAAIL
Sbjct: 333 RFDRQVSVDVPDFRGRLAILEVHAKNKKMESKVSLETIARRTPGFSGADLANLLNEAAIL 392
Query: 451 AGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICG 500
RR K+A++ EID SIDR+VAG+EGT + D KSK L+AYHEVGHAI G
Sbjct: 393 TARRRKSAMTMSEIDTSIDRVVAGLEGTPLIDSKSKRLIAYHEVGHAIIG 442
>sp|Q1PDW5|FTSH6_ARATH ATP-dependent zinc metalloprotease FTSH 6, chloroplastic
OS=Arabidopsis thaliana GN=FTSH6 PE=2 SV=1
Length = 688
Score = 612 bits (1579), Expect = e-174, Method: Compositional matrix adjust.
Identities = 311/431 (72%), Positives = 357/431 (82%), Gaps = 10/431 (2%)
Query: 73 GVGTALLGSGKAYADEQ-GVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPEL 131
+GT L KA + +S+RMSYSRFL++L ++ VKKVDL ENGT+AIVE +P +
Sbjct: 70 ALGTVLAHPAKAEPEAPIEATSNRMSYSRFLQHLKENEVKKVDLIENGTVAIVEISNPVV 129
Query: 132 GNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLF 191
G ++QRVRV LPGL +L+++ +EKN+DFAAH + G+ L N +GNL FPLIL+ L
Sbjct: 130 G-KIQRVRVNLPGLPVDLVREMKEKNVDFAAHPMNVNWGAFLLNFLGNLGFPLILLVSLL 188
Query: 192 LLS--RRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF 249
L S RR+ P GP P G+SKAKFQMEPNTG+TF+DVAGVDEAKQDF E+VEF
Sbjct: 189 LTSSSRRN------PAGPNLPFGLGRSKAKFQMEPNTGITFEDVAGVDEAKQDFEEIVEF 242
Query: 250 LKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGA 309
LK PE+F+A+GA+IPKGVLL GPPGTGKTLLAKAIAGEAGVPFFS+SGSEF+EMFVGVGA
Sbjct: 243 LKTPEKFSALGAKIPKGVLLTGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGA 302
Query: 310 SRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTG 369
SR RDLF KAK N+PCIVF+DEIDAVGR RGTGIGGGNDEREQTLNQ+LTEMDGF GNTG
Sbjct: 303 SRARDLFNKAKANSPCIVFIDEIDAVGRMRGTGIGGGNDEREQTLNQILTEMDGFAGNTG 362
Query: 370 IIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIA 429
+IVIAATNR +ILDSALLRPGRFDRQV+V +PDIRGR EILKVH +KK D DVSL VIA
Sbjct: 363 VIVIAATNRPEILDSALLRPGRFDRQVSVGLPDIRGREEILKVHSRSKKLDKDVSLSVIA 422
Query: 430 MRTPGFSGADLANLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLV 489
MRTPGFSGADLANL+NEAAILAGRRGK I+ EIDDSIDRIVAGMEGT M DGKSK++V
Sbjct: 423 MRTPGFSGADLANLMNEAAILAGRRGKDKITLTEIDDSIDRIVAGMEGTKMIDGKSKAIV 482
Query: 490 AYHEVGHAICG 500
AYHEVGHAIC
Sbjct: 483 AYHEVGHAICA 493
>sp|Q1XDF9|FTSH_PORYE ATP-dependent zinc metalloprotease FtsH OS=Porphyra yezoensis
GN=ftsH PE=3 SV=1
Length = 628
Score = 590 bits (1521), Expect = e-168, Method: Compositional matrix adjust.
Identities = 302/410 (73%), Positives = 345/410 (84%), Gaps = 5/410 (1%)
Query: 91 VSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELL 150
++SSRM+Y RFLEYLD VK+VDL+EN AIVEA+ PELGNRVQR+RV+LP + EL+
Sbjct: 38 IASSRMTYGRFLEYLDMGWVKRVDLYENNHTAIVEAVGPELGNRVQRIRVELPASAPELI 97
Query: 151 QKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFP 210
K R+ N+D AH + S S ++ L+GNL FPL+L+GGL L RRS+ GGPG
Sbjct: 98 TKLRKANVDLDAHPPK--STSAVWGLLGNLLFPLLLVGGLAFLFRRSNNASGGPGQA--- 152
Query: 211 LAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLV 270
++FG+SKA FQME TGV F+DVAGV+EAK++F EVV FLK+PE FTA+GA+IPKGVLLV
Sbjct: 153 MSFGKSKALFQMEAKTGVVFNDVAGVEEAKEEFQEVVTFLKQPESFTAVGAKIPKGVLLV 212
Query: 271 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD 330
GPPGTGKTLLAKAIAGEA VPFFSISGSEFVEMFVGVGASRVRDLFKKAK+NAPCIVF+D
Sbjct: 213 GPPGTGKTLLAKAIAGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKAKDNAPCIVFID 272
Query: 331 EIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPG 390
EIDAVGRQRGTG+GGGNDEREQTLNQLLTEMDGFEGNTG+IVIAATNRADILDSALLRPG
Sbjct: 273 EIDAVGRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRADILDSALLRPG 332
Query: 391 RFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAIL 450
RFDRQV+VDVPD +GR IL+VH NKK + VSL+ IA RTPGFSGADLANLLNEAAIL
Sbjct: 333 RFDRQVSVDVPDFKGRLAILEVHAKNKKMEPKVSLETIARRTPGFSGADLANLLNEAAIL 392
Query: 451 AGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICG 500
RR K A++ EID SIDR+VAGMEGT + D KSK L+AYHEVGHAI G
Sbjct: 393 TARRRKNAMTMSEIDTSIDRVVAGMEGTPLIDSKSKRLIAYHEVGHAIIG 442
>sp|Q55700|FTSH2_SYNY3 ATP-dependent zinc metalloprotease FtsH 2 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH2 PE=1 SV=1
Length = 627
Score = 583 bits (1502), Expect = e-165, Method: Compositional matrix adjust.
Identities = 292/431 (67%), Positives = 341/431 (79%), Gaps = 14/431 (3%)
Query: 70 GNVGVGTALLGSGKAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISP 129
G+ G A LGS A ++RM+Y RFLEY+D R+ VDL+ENG AIV+ P
Sbjct: 25 GSFGGADANLGSNTA--------NTRMTYGRFLEYVDAGRITSVDLYENGRTAIVQVSDP 76
Query: 130 ELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGG 189
E+ +R R RV LP + EL+ + R+ NI +H + + +++ +GNL FP++LI
Sbjct: 77 EV-DRTLRSRVDLPTNAPELIARLRDSNIRLDSHPVRNNG--MVWGFVGNLIFPVLLIAS 133
Query: 190 LFLLSRRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF 249
LF L RRSS PGGPG + FG+SKA+FQM+ TGV FDDVAG+DEAK++ EVV F
Sbjct: 134 LFFLFRRSSNM---PGGPGQAMNFGKSKARFQMDAKTGVMFDDVAGIDEAKEELQEVVTF 190
Query: 250 LKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGA 309
LK+PERFTA+GA+IPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGA
Sbjct: 191 LKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGA 250
Query: 310 SRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTG 369
SRVRDLFKKAKENAPC++F+DEIDAVGRQRG GIGGGNDEREQTLNQLLTEMDGFEGNTG
Sbjct: 251 SRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTG 310
Query: 370 IIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIA 429
II+IAATNR D+LDSAL+RPGRFDRQV VD PD GR EIL+VH NKK +VS+D IA
Sbjct: 311 IIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEILEVHARNKKLAPEVSIDSIA 370
Query: 430 MRTPGFSGADLANLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLV 489
RTPGFSGADLANLLNEAAIL RR K+AI+ EIDD++DR+VAGMEGT + D KSK L+
Sbjct: 371 RRTPGFSGADLANLLNEAAILTARRRKSAITLLEIDDAVDRVVAGMEGTPLVDSKSKRLI 430
Query: 490 AYHEVGHAICG 500
AYHEVGHAI G
Sbjct: 431 AYHEVGHAIVG 441
>sp|Q67WJ2|FTSH6_ORYSJ ATP-dependent zinc metalloprotease FTSH 6, chloroplastic OS=Oryza
sativa subsp. japonica GN=FTSH6 PE=3 SV=1
Length = 686
Score = 581 bits (1498), Expect = e-165, Method: Compositional matrix adjust.
Identities = 296/419 (70%), Positives = 343/419 (81%), Gaps = 7/419 (1%)
Query: 83 KAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQL 142
+A A E+ V+S+RMSYSRFLEYLD VKKVD FENGT+A+ E +RV RV+VQL
Sbjct: 77 EATAPEE-VTSNRMSYSRFLEYLDAGAVKKVDFFENGTVAVAEVDDAAALSRVHRVKVQL 135
Query: 143 PGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMG 202
PGL EL++K R+K +DFAAH + +G +L +L+ N FPL+ + L S M
Sbjct: 136 PGLPAELVRKLRDKGVDFAAHPVEPSAGVMLLDLLVNFGFPLLFVASLLW----RSPTMN 191
Query: 203 GPGG-PGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGA 261
PGG P P G+SKAKFQMEP TGVTFDDVAGVDEAKQDF E+V+FLK PE+FTA+GA
Sbjct: 192 NPGGGPSLPFGLGKSKAKFQMEPKTGVTFDDVAGVDEAKQDFQEIVQFLKFPEKFTAVGA 251
Query: 262 RIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKE 321
R PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFS+SGSEF+EMFVGVGASRVRDLF +AK
Sbjct: 252 RTPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFDRAKA 311
Query: 322 NAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEM-DGFEGNTGIIVIAATNRAD 380
+APC+VF+DEIDAVGRQRG GIGGGNDEREQTLNQLLTEM G+ G++VIAATNR +
Sbjct: 312 SAPCLVFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFGGGDGGVVVIAATNRPE 371
Query: 381 ILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADL 440
ILD+ALLRPGRFDR+V+V +PD+RGR EIL VHG+NK+ D VSL V+AMRTPGFSGADL
Sbjct: 372 ILDAALLRPGRFDRRVSVGLPDVRGREEILLVHGANKRLDPGVSLAVVAMRTPGFSGADL 431
Query: 441 ANLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAIC 499
ANL+NEAAILAGRRGK I+ EIDDSIDRIVAG+EGT MTDGKSK LVAYHE+GHA+C
Sbjct: 432 ANLMNEAAILAGRRGKDRITVSEIDDSIDRIVAGLEGTSMTDGKSKMLVAYHEIGHAVC 490
>sp|P49825|FTSH_ODOSI ATP-dependent zinc metalloprotease FtsH OS=Odontella sinensis
GN=ftsH PE=3 SV=1
Length = 644
Score = 534 bits (1375), Expect = e-151, Method: Compositional matrix adjust.
Identities = 258/410 (62%), Positives = 325/410 (79%), Gaps = 4/410 (0%)
Query: 91 VSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELL 150
V SS+M+Y RFLEYL+ V +VDL++N AIV+A SPELGNR Q +RV++P + +L+
Sbjct: 50 VISSKMTYGRFLEYLEMGWVNQVDLYDNSRNAIVQASSPELGNRPQTIRVEIPVGASQLI 109
Query: 151 QKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFP 210
QK +E NIDF AH A++ + + N++ N+ P+I I GL L + S GG G P
Sbjct: 110 QKLKEYNIDFDAHPAEQKN--IFVNILSNILLPIIFITGLVYLFQNSENFGGGSGQS--P 165
Query: 211 LAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLV 270
++ G+S A+F+ P+TGV+F D+AG+DEAK +F E+V FLK+P+++T +GA+IPKG+LLV
Sbjct: 166 MSLGKSTARFERRPDTGVSFKDIAGIDEAKTEFEEIVSFLKEPDKYTIVGAKIPKGILLV 225
Query: 271 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD 330
GPPGTGKTLLAKAIA EA VPFFS++GSEFVEMF+G+GA+RVRDLFKKA ENAPCIVF+D
Sbjct: 226 GPPGTGKTLLAKAIANEADVPFFSVAGSEFVEMFIGIGAARVRDLFKKASENAPCIVFID 285
Query: 331 EIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPG 390
EIDAVGR+RG G+GGGNDEREQTLNQLLTEMDGF+ N G+IV+ ATNRADILD+ALLRPG
Sbjct: 286 EIDAVGRERGAGVGGGNDEREQTLNQLLTEMDGFKENKGVIVVGATNRADILDAALLRPG 345
Query: 391 RFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAIL 450
RFDRQVTV++PD GR ILKVH NK DVSL +A RTPGFSGADLANLLNEAAIL
Sbjct: 346 RFDRQVTVNLPDRLGRVGILKVHARNKPLGEDVSLVQLANRTPGFSGADLANLLNEAAIL 405
Query: 451 AGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICG 500
A R K++I+ E++++ DRI+ G+ G M D K+K L+AYHEVGHAI G
Sbjct: 406 ATRYKKSSITKNEVNEAADRIIGGIAGAPMEDTKNKRLIAYHEVGHAITG 455
>sp|B7T1V0|FTSH_VAULI ATP-dependent zinc metalloprotease FtsH OS=Vaucheria litorea
GN=ftsH PE=3 SV=1
Length = 644
Score = 530 bits (1364), Expect = e-149, Method: Compositional matrix adjust.
Identities = 268/413 (64%), Positives = 335/413 (81%), Gaps = 5/413 (1%)
Query: 88 EQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQ 147
+Q ++ +M+Y RFLEYLD +KKVD ++NG IAI+EA SPELG+R+Q++RV++P
Sbjct: 37 KQNSNNIKMTYGRFLEYLDMGWIKKVDFYDNGRIAIIEASSPELGDRLQKIRVEIPVGDS 96
Query: 148 ELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGP 207
L+ K R +DF AH+ G +F + N+ PLI+I GL L RRS+ M GPG
Sbjct: 97 PLIVKLRTAKVDFTAHSTINSKG--IFTQLSNIFIPLIIIIGLIFLFRRSTNFMSGPGQL 154
Query: 208 GFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGV 267
++F +++AK Q E NT V FDDVAG+DE K++F EVV FL+KP+RF ++GA+IPKGV
Sbjct: 155 ---MSFRKARAKVQTEINTDVVFDDVAGIDEVKEEFEEVVTFLRKPQRFLSVGAKIPKGV 211
Query: 268 LLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIV 327
+L+GPPGTGKTLLAKAIAGEAGVPF SISGSEFVEMFVG+GASRVRDLFK A++NAPCIV
Sbjct: 212 ILIGPPGTGKTLLAKAIAGEAGVPFISISGSEFVEMFVGIGASRVRDLFKTAQQNAPCIV 271
Query: 328 FVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALL 387
F+DEIDAVGRQRG GIGGGNDEREQTLNQ+LTEMDGF+ NTGIIVIAATNR D+LD ALL
Sbjct: 272 FIDEIDAVGRQRGAGIGGGNDEREQTLNQILTEMDGFKENTGIIVIAATNRVDVLDGALL 331
Query: 388 RPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEA 447
RPGRFDRQV++++PDI+GR EILKVH NKK D+++SL +IA RTPGFSGADLANLLNE+
Sbjct: 332 RPGRFDRQVSINLPDIKGRLEILKVHAKNKKLDSNISLGLIAQRTPGFSGADLANLLNES 391
Query: 448 AILAGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICG 500
AIL RR K AI+ E++ +IDR++AG+EGT +TD K+K L+AYHE+GHA+ G
Sbjct: 392 AILTARRNKFAITMSEVNTAIDRLLAGLEGTSLTDTKNKRLIAYHEIGHAVIG 444
>sp|Q9TJ83|FTSH_CYAME ATP-dependent zinc metalloprotease FtsH OS=Cyanidioschyzon merolae
GN=ftsH PE=3 SV=1
Length = 603
Score = 527 bits (1358), Expect = e-149, Method: Compositional matrix adjust.
Identities = 263/416 (63%), Positives = 318/416 (76%), Gaps = 16/416 (3%)
Query: 86 ADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGL 145
A++ V++SRM+Y R LEY+ VK++D+++ A++EA SPE G Q +RV LP
Sbjct: 23 ANQMPVATSRMTYGRLLEYMQMGWVKRIDVYDR--TALIEASSPETG--WQWIRVDLPAN 78
Query: 146 SQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGG-LFLLSRRSSGGMGGP 204
S + L++ + +ID H + S N+ N PLI+IG ++LLSR +S G
Sbjct: 79 SSDWLEQAKTLHIDVDVH-----AVSNWINVASNWIIPLIIIGVVIWLLSRSASSNTTGA 133
Query: 205 GGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIP 264
L FG+SKA+FQM TG+ FDDVAG++EAK++ EVV FLK P +F A+GA IP
Sbjct: 134 ------LNFGKSKARFQMVAKTGIMFDDVAGIEEAKEELAEVVAFLKNPSKFLAVGASIP 187
Query: 265 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 324
KGVLLVGPPGTGKTLLAKAIAGEA VPFFSISGSEFVEMFVGVGASRVRDLFKKAK+NAP
Sbjct: 188 KGVLLVGPPGTGKTLLAKAIAGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKAKQNAP 247
Query: 325 CIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDS 384
C+VF+DEIDAVGRQRG GIGGGNDEREQTLNQLLTEMDGFEGNTG+IVIAATNR D+LD+
Sbjct: 248 CLVFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRVDVLDA 307
Query: 385 ALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLL 444
ALLRPGRFDRQ+ V +PD++ R ILKVH + KK VSL+ +A RT GF+GADLANLL
Sbjct: 308 ALLRPGRFDRQIMVSMPDVKSRIAILKVHANQKKLHPQVSLEAVARRTAGFAGADLANLL 367
Query: 445 NEAAILAGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICG 500
NEAAILA RRG I+ KEIDD+IDR++AGMEGT + DGK K L+AYHE GHA+
Sbjct: 368 NEAAILAVRRGLKQITWKEIDDAIDRVIAGMEGTPIMDGKIKRLIAYHETGHALTA 423
>sp|O19922|FTSH_CYACA ATP-dependent zinc metalloprotease FtsH OS=Cyanidium caldarium
GN=ftsH PE=3 SV=1
Length = 614
Score = 524 bits (1350), Expect = e-148, Method: Compositional matrix adjust.
Identities = 269/409 (65%), Positives = 316/409 (77%), Gaps = 5/409 (1%)
Query: 92 SSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQ 151
SSSRM+Y RFLEY+D + VKKVDL++N AIV+ I+P++ Q VRV+LP S EL+
Sbjct: 37 SSSRMTYGRFLEYIDMNWVKKVDLYDNARTAIVDIINPDIKGEEQLVRVELPTFSSELVS 96
Query: 152 KFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPL 211
K + K IDF AH + + L + + NL PLILI LF RR G GPG
Sbjct: 97 KLKNKLIDFDAHPSSSNVN--LVSWLSNLLLPLILIITLFFFFRR---GNKSSSGPGQAF 151
Query: 212 AFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVG 271
FG++KA+F ME TG+ F+DVAG++EAK++ E+V FLK +FT +GA IPKGVLLVG
Sbjct: 152 NFGKAKARFHMEAKTGIVFEDVAGIEEAKEELQEIVAFLKDSRKFTNVGATIPKGVLLVG 211
Query: 272 PPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDE 331
PPGTGKTLLAKAIAGEA PFFSISGSEFVEMFVGVGASRVRDLFKKAKE APCIVF+DE
Sbjct: 212 PPGTGKTLLAKAIAGEASAPFFSISGSEFVEMFVGVGASRVRDLFKKAKEKAPCIVFIDE 271
Query: 332 IDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGR 391
IDAVGRQRG GIGGGNDEREQTLNQLLTEMDGF G+TG+IV+AATNR D+LDSALLRPGR
Sbjct: 272 IDAVGRQRGVGIGGGNDEREQTLNQLLTEMDGFSGDTGVIVVAATNRIDVLDSALLRPGR 331
Query: 392 FDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILA 451
FDRQ+ V +P+I GR ILKVH KK DV L+VIA RTPGFSGADLANLLNEAAIL
Sbjct: 332 FDRQIMVSLPNINGRLAILKVHSKKKKIHKDVLLEVIARRTPGFSGADLANLLNEAAILT 391
Query: 452 GRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICG 500
RRGK I+ KEI+DSID+I+AG+EG+ + D + K L+AYHE GHA+
Sbjct: 392 VRRGKVEITMKEIEDSIDKIIAGLEGSPLADSRIKRLIAYHEAGHAVAA 440
>sp|Q8YMZ8|FTSH_NOSS1 ATP-dependent zinc metalloprotease FtsH OS=Nostoc sp. (strain PCC
7120 / UTEX 2576) GN=ftsH PE=3 SV=1
Length = 656
Score = 523 bits (1346), Expect = e-147, Method: Compositional matrix adjust.
Identities = 268/453 (59%), Positives = 333/453 (73%), Gaps = 16/453 (3%)
Query: 50 KASLSQKQHEGRRGFLKKLVGNVGVGTALLGSGKAYADEQGVSSSRMSYSRFLEYLDKDR 109
K +L ++Q R + L ++ + + G A Q +SY ++ +++++
Sbjct: 30 KKALIKQQSPKRVAWTGALAASLIMLPTMFGGNPVLA--QKAERESLSYGELIQKVNQEQ 87
Query: 110 VKKVDLFENGTIAIV--EAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQE 167
VK+V+L E IA V + P+ ++V+L + EL+ + +EKN+DF ++
Sbjct: 88 VKRVELDETEQIAKVYLKGQKPD----APPIQVRLLEQNNELINRLKEKNVDFGEISSAN 143
Query: 168 DSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTG 227
++ L+ NL + L L+ + L RRS+ + FG+S+A+FQME TG
Sbjct: 144 SRAAV--GLLINLMWILPLVALMLLFLRRSTNASSQA------MNFGKSRARFQMEAKTG 195
Query: 228 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGE 287
V FDDVAG++EAK++ EVV FLK+PERFTA+GARIPKGVLLVGPPGTGKTLLAKAIAGE
Sbjct: 196 VKFDDVAGIEEAKEELQEVVTFLKQPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 255
Query: 288 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGN 347
A VPFFSISGSEFVEMFVGVGASRVRDLFKKAK+NAPC++F+DEIDAVGRQRGTGIGGGN
Sbjct: 256 AAVPFFSISGSEFVEMFVGVGASRVRDLFKKAKDNAPCLIFIDEIDAVGRQRGTGIGGGN 315
Query: 348 DEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRT 407
DEREQTLNQLLTEMDGFEGNTGII+IAATNR D+LDSALLRPGRFDRQV VD PD++GR
Sbjct: 316 DEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALLRPGRFDRQVIVDAPDLKGRL 375
Query: 408 EILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILAGRRGKAAISSKEIDDS 467
EIL+VH NKK D VSL+ IA RTPGF+GADLANLLNEAAIL RR K AI+ EIDD+
Sbjct: 376 EILQVHSRNKKVDPSVSLEAIARRTPGFTGADLANLLNEAAILTARRRKEAITILEIDDA 435
Query: 468 IDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICG 500
+DR+VAGMEGT + D KSK L+AYHEVGH + G
Sbjct: 436 VDRVVAGMEGTPLVDSKSKRLIAYHEVGHGLVG 468
>sp|P73179|FTSH1_SYNY3 ATP-dependent zinc metalloprotease FtsH 1 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH1 PE=2 SV=1
Length = 665
Score = 502 bits (1293), Expect = e-141, Method: Compositional matrix adjust.
Identities = 258/411 (62%), Positives = 313/411 (76%), Gaps = 12/411 (2%)
Query: 92 SSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQ 151
+ +M+Y + ++ + ++V KV++ N AIV G++ Q V QL + ELL
Sbjct: 80 AEPKMNYGQLIDAIKANQVAKVEVDTNRRQAIVTLKDAPPGSKPQTV--QLLDNNPELLN 137
Query: 152 KFREKN--IDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGF 209
R ++ ID + ++S L+ L+ NL ILIG + ++ RRS+ G
Sbjct: 138 LLRSRSETIDLDINRTPDNSA--LYGLLTNLLVVAILIGLVVMVVRRSANASGQA----- 190
Query: 210 PLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLL 269
++FG+SKA+FQME TGV FDDVAG+DEAK++ EVV FLK+PE+FTAIGA+IP+GVLL
Sbjct: 191 -MSFGKSKARFQMEAKTGVGFDDVAGIDEAKEELQEVVTFLKQPEKFTAIGAKIPRGVLL 249
Query: 270 VGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFV 329
+GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC+VF+
Sbjct: 250 IGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLVFI 309
Query: 330 DEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRP 389
DEIDAVGRQRG G GGGNDEREQTLNQLLTEMDGFEGN+GIIVIAATNR D+LD ALLRP
Sbjct: 310 DEIDAVGRQRGVGYGGGNDEREQTLNQLLTEMDGFEGNSGIIVIAATNRPDVLDLALLRP 369
Query: 390 GRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAI 449
GRFDRQVTVD PD++GR IL +H NKK +V L IA RTPGF+GADLAN+LNEAAI
Sbjct: 370 GRFDRQVTVDYPDVQGRELILAIHAQNKKLHEEVQLAAIARRTPGFTGADLANVLNEAAI 429
Query: 450 LAGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICG 500
RR K AI+ E++D+IDR+VAGMEGT + D KSK L+AYHEVGHA+ G
Sbjct: 430 FTARRRKEAITMAEVNDAIDRVVAGMEGTPLVDSKSKRLIAYHEVGHALIG 480
>sp|Q10ZF7|FTSH_TRIEI ATP-dependent zinc metalloprotease FtsH OS=Trichodesmium erythraeum
(strain IMS101) GN=ftsH PE=3 SV=1
Length = 667
Score = 480 bits (1235), Expect = e-134, Method: Compositional matrix adjust.
Identities = 256/431 (59%), Positives = 314/431 (72%), Gaps = 23/431 (5%)
Query: 74 VGTALLGSGKAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGN 133
+ A+L A+A+ + +SYS+ L+ + V ++D + + IA V
Sbjct: 59 IAQAVLLVSPAFANS---TQKNLSYSQLLDKIQAGEVTEIDYYPSRGIAKVSL------- 108
Query: 134 RVQRVR-----VQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIG 188
+ QR R VQ+ ELL + R + IDF + ++S ++ +I N+ ++I
Sbjct: 109 KGQRSREGMYIVQMFEHVPELLDQVRAQKIDFELKRSPDNSVAM--GIIFNILIVFVVIV 166
Query: 189 GLFLLSRRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVE 248
L + RRSS G L FG+S+A+FQME TGV F+DVAG++EAK++ EVV
Sbjct: 167 VLLAILRRSSQSQGNA------LNFGKSRARFQMEAKTGVLFEDVAGIEEAKEELQEVVS 220
Query: 249 FLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVG 308
FLKKPE+FTAIGA+IPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVG
Sbjct: 221 FLKKPEKFTAIGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVG 280
Query: 309 ASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNT 368
ASRVRDLFKKAKENAPCI+F+DEIDAVGRQRG GIGGGNDEREQTLNQLLTEMDGFEGN+
Sbjct: 281 ASRVRDLFKKAKENAPCIIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNS 340
Query: 369 GIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVI 428
GII+IAATNR D+LD ALLRPGRFDRQVTVD+P +GR IL+VH NKK ++SL+ I
Sbjct: 341 GIIIIAATNRPDVLDVALLRPGRFDRQVTVDLPAYKGRLGILEVHARNKKLTPEISLEAI 400
Query: 429 AMRTPGFSGADLANLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGKSKSL 488
A +TPGFSGADLAN+LNEAAIL RR K I+ EIDD+IDR+ G+ T + DGK K L
Sbjct: 401 ARKTPGFSGADLANMLNEAAILTARRRKEGITPNEIDDAIDRVTIGLSLTPLLDGKKKRL 460
Query: 489 VAYHEVGHAIC 499
+AYHE+GHA+
Sbjct: 461 IAYHELGHALL 471
>sp|B2XTF7|FTSH_HETA2 ATP-dependent zinc metalloprotease FtsH OS=Heterosigma akashiwo
(strain NIES-293) GN=ftsH PE=3 SV=1
Length = 663
Score = 479 bits (1232), Expect = e-134, Method: Compositional matrix adjust.
Identities = 246/419 (58%), Positives = 309/419 (73%), Gaps = 10/419 (2%)
Query: 92 SSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQ 151
+SS+M+Y+R L Y++K +K +D +ENG IAIVEA S EL +R QR+RV++P S L+
Sbjct: 55 ASSKMAYARLLNYIEKGWIKTIDFYENGQIAIVEASSSELSDRPQRLRVEIPAGSTSLIG 114
Query: 152 KFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPL 211
K +E N+D AH + D + + +G+L P +++ +L R++
Sbjct: 115 KLKEANVDINAHPPKLDIFKTISDTLGSLIVPGLVVAVFYLFLERANNNNNNNSNGSPFG 174
Query: 212 A----------FGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGA 261
G+ K + Q EP+TG+TF D+AG++E K++F E+V FLK P RFTA+GA
Sbjct: 175 PGGGPNQNMRGLGEIKKEIQKEPDTGITFKDIAGIEEVKEEFEEIVTFLKDPSRFTAVGA 234
Query: 262 RIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKE 321
IPKGVLLVGPPGTGKTLLAKAIAGEA VPF +ISGSEFVEMFVGVGA+RVR+LF+KAK+
Sbjct: 235 TIPKGVLLVGPPGTGKTLLAKAIAGEAKVPFINISGSEFVEMFVGVGAARVRNLFEKAKQ 294
Query: 322 NAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADI 381
+ PCI+F+DEIDAVGRQRG G+GGGNDEREQTLNQLLTEMDGFE N GI+VIAATNRADI
Sbjct: 295 DTPCIIFIDEIDAVGRQRGAGVGGGNDEREQTLNQLLTEMDGFEKNKGIVVIAATNRADI 354
Query: 382 LDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLA 441
LD+ALLRPGRFDRQVTV+ PD GR IL VH NKK +SL+ IA RT GF GA+LA
Sbjct: 355 LDNALLRPGRFDRQVTVNPPDRAGRVAILAVHARNKKLSPAISLETIAQRTTGFGGAELA 414
Query: 442 NLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAICG 500
NLLNEAAI++ R KA I SKEI +I+R++AG+EG + D K+K LVAYHE GHA+ G
Sbjct: 415 NLLNEAAIISAREEKAEIGSKEISLAIERVIAGLEGPSIADNKNKRLVAYHEAGHAMVG 473
>sp|P72991|FTSH3_SYNY3 ATP-dependent zinc metalloprotease FtsH 3 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH3 PE=1 SV=1
Length = 616
Score = 471 bits (1212), Expect = e-132, Method: Compositional matrix adjust.
Identities = 250/422 (59%), Positives = 304/422 (72%), Gaps = 22/422 (5%)
Query: 84 AYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAIS---PELGNRVQRVRV 140
A+ D + +SYS F+ ++ +++++V+L + T A V S P L V
Sbjct: 27 AFFDRPTQTRETLSYSDFVNRVEANQIERVNLSADRTQAQVPNPSGGPPYL--------V 78
Query: 141 QLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGG 200
LP +L+ + N+D A Q D G F + L P++L+ G+F L RR+ G
Sbjct: 79 NLPN-DPDLINILTQHNVDIAVQ-PQSDEG-FWFRIASTLFLPILLLVGIFFLFRRAQSG 135
Query: 201 MGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIG 260
G + FG+SKA+ QMEP T VTF DVAG+++AK + EVV+FLK +RFT +G
Sbjct: 136 PGSQA-----MNFGKSKARVQMEPQTQVTFGDVAGIEQAKLELTEVVDFLKNADRFTELG 190
Query: 261 ARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAK 320
A+IPKGVLLVGPPGTGKTLLAKA+AGEAGVPFFSISGSEFVEMFVGVGASRVRDLF++AK
Sbjct: 191 AKIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAK 250
Query: 321 ENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRAD 380
NAPCIVF+DEIDAVGRQRG G+GGGNDEREQTLNQLLTEMDGFEGNTGII++AATNR D
Sbjct: 251 ANAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNTGIIIVAATNRPD 310
Query: 381 ILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADL 440
+LDSAL+RPGRFDRQV VD PD GR EIL VH K DV LD IA RTPGF+GADL
Sbjct: 311 VLDSALMRPGRFDRQVVVDRPDYAGRREILNVHARGKTLSQDVDLDKIARRTPGFTGADL 370
Query: 441 ANLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAI 498
+NLLNEAAILA RR IS E++D+IDR++AG E VM++ K K+LVAYHE GHA+
Sbjct: 371 SNLLNEAAILAARRNLTEISMDEVNDAIDRVLAGPEKKNRVMSE-KRKTLVAYHEAGHAL 429
Query: 499 CG 500
G
Sbjct: 430 VG 431
>sp|Q2JNP0|FTSH_SYNJB ATP-dependent zinc metalloprotease FtsH OS=Synechococcus sp.
(strain JA-2-3B'a(2-13)) GN=ftsH PE=3 SV=1
Length = 638
Score = 467 bits (1201), Expect = e-131, Method: Compositional matrix adjust.
Identities = 252/411 (61%), Positives = 307/411 (74%), Gaps = 18/411 (4%)
Query: 96 MSYSRFLEYLDKDRVKKVDLFENG----TIAIVEAISPELGNRVQRVRVQLPGLSQELLQ 151
+SYS + +++ V KV L E +AI EA E+ NR +V+V LP L+ E
Sbjct: 41 ISYSDLISRVERGEVSKV-LVETAPDGRQVAIAEA---EINNRATQVQVNLPPLTPEFEN 96
Query: 152 KFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPL 211
++ A QE+ LL ++ P++L+ GLF L RR+ G G L
Sbjct: 97 TLVANGVELAVRPVQEEG--LLGRILSTFFLPVLLLLGLFFLLRRAQNGPGSQA-----L 149
Query: 212 AFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVG 271
FG+S+A+ QMEP T +TF+DVAG+D+AK + EVV+FLK ERFTA+GA+IP+GVLLVG
Sbjct: 150 NFGKSRARVQMEPKTQITFNDVAGIDQAKLELAEVVDFLKNSERFTALGAKIPRGVLLVG 209
Query: 272 PPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDE 331
PPGTGKTLLA+A+AGEAGVPFFSISGSEFVEMFVGVGASRVRDLF++AK+NAPCIVF+DE
Sbjct: 210 PPGTGKTLLARAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKQNAPCIVFIDE 269
Query: 332 IDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGR 391
IDAVGRQRG G+GGGNDEREQTLNQLLTEMDGFEGN+GIIVIAATNR D+LD+ALLRPGR
Sbjct: 270 IDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNSGIIVIAATNRPDVLDAALLRPGR 329
Query: 392 FDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILA 451
FDRQVTVD PD +GR EILKVH K ADV L+ +A RTPGF+GADLANLLNEAAILA
Sbjct: 330 FDRQVTVDRPDFQGRLEILKVHARGKTLSADVDLEKLARRTPGFTGADLANLLNEAAILA 389
Query: 452 GRRGKAAISSKEIDDSIDRIVAGMEGT--VMTDGKSKSLVAYHEVGHAICG 500
RR IS EI+D++DR++AG E +M++ + K LVAYHE GHA+ G
Sbjct: 390 ARRNLTEISMDEINDAVDRVLAGPEKKDRLMSE-RRKELVAYHEAGHALVG 439
>sp|Q9FH02|FTSH5_ARATH ATP-dependent zinc metalloprotease FTSH 5, chloroplastic
OS=Arabidopsis thaliana GN=FTSH5 PE=1 SV=1
Length = 704
Score = 458 bits (1178), Expect = e-128, Method: Compositional matrix adjust.
Identities = 245/409 (59%), Positives = 303/409 (74%), Gaps = 12/409 (2%)
Query: 94 SRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKF 153
++ YS FL + K +V++V ++G++ + A+ NR R V +P +L+
Sbjct: 122 TQWRYSEFLNAVKKGKVERVKFSKDGSVLQLTAVD----NR--RATVIVPN-DPDLIDIL 174
Query: 154 REKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAF 213
+D + + +G LF+ IGNL FPL+ GGLF L R GG GGPGG G P+ F
Sbjct: 175 AMNGVDISVSEGEGGNG--LFDFIGNLLFPLLAFGGLFYLFRGGQGGAGGPGGLGGPMDF 232
Query: 214 GQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPP 273
G+SK+KFQ P TGVTF DVAG D+AK + EVV+FLK P+++TA+GA+IPKG LLVGPP
Sbjct: 233 GRSKSKFQEVPETGVTFGDVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPP 292
Query: 274 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 333
GTGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVRDLF+KAK APCIVF+DEID
Sbjct: 293 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 352
Query: 334 AVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD 393
AVGRQRG G+GGGNDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLRPGRFD
Sbjct: 353 AVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 412
Query: 394 RQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILAGR 453
RQVTVD PD+ GR +ILKVH K DV + +A RTPGF+GADL NL+NEAAILA R
Sbjct: 413 RQVTVDRPDVAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILAAR 472
Query: 454 RGKAAISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAICG 500
R IS EI D+++RI+AG E V+++ K K LVAYHE GHA+ G
Sbjct: 473 RELKEISKDEISDALERIIAGPEKKNAVVSEEK-KRLVAYHEAGHALVG 520
>sp|O82150|FTSH_TOBAC ATP-dependent zinc metalloprotease FTSH, chloroplastic OS=Nicotiana
tabacum GN=FTSH PE=2 SV=2
Length = 714
Score = 454 bits (1168), Expect = e-127, Method: Compositional matrix adjust.
Identities = 246/409 (60%), Positives = 303/409 (74%), Gaps = 12/409 (2%)
Query: 94 SRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKF 153
S+ YS FL + K +V++V ++G+ + A+ +R V +P +L+
Sbjct: 125 SQWRYSEFLNAVKKGKVERVRFSKDGSALQLTAVDG------RRATVTVPN-DPDLIDIL 177
Query: 154 REKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAF 213
+D + + +G+ LFNLIGNL FP I GLF L +RS GG GGPGG G P+ F
Sbjct: 178 AMNGVDISVSEG-DSAGNGLFNLIGNL-FPFIAFAGLFYLFQRSQGGPGGPGGLGGPMDF 235
Query: 214 GQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPP 273
G+SK+KFQ P TGVTF DVAG D+AK + EVV+FLK P+++TA+GA+IPKG LLVGPP
Sbjct: 236 GRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPP 295
Query: 274 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 333
GTGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVRDLF+KAK APCIVF+DEID
Sbjct: 296 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 355
Query: 334 AVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD 393
AVGRQRG G+GGGNDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLRPGRFD
Sbjct: 356 AVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 415
Query: 394 RQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILAGR 453
RQVTVD PD+ GR +IL+VH K DV + IA RTPG++GADL NL+NEAAILA R
Sbjct: 416 RQVTVDRPDVAGRIKILQVHSRGKALTKDVDFEKIARRTPGYTGADLQNLMNEAAILAAR 475
Query: 454 RGKAAISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAICG 500
R IS EI D+++RI+AG E V++D K K LVAYHE GHA+ G
Sbjct: 476 RELKEISKDEISDALERIIAGPEKKNAVVSDEK-KKLVAYHEAGHALVG 523
>sp|Q39444|FTSH_CAPAN ATP-dependent zinc metalloprotease FTSH, chloroplastic (Fragment)
OS=Capsicum annuum GN=FTSH PE=2 SV=1
Length = 662
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 244/410 (59%), Positives = 302/410 (73%), Gaps = 12/410 (2%)
Query: 93 SSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQK 152
S++ YS FL + K +V++V ++G+ + A+ +R V +P +L+
Sbjct: 101 STQWRYSEFLNAVKKGKVERVRFSKDGSALQLTAVDG------RRANVIVPN-DPDLIDI 153
Query: 153 FREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLA 212
+D + ++ + G+ LF++IGNL FP I GLF L RRS GG GGPGG G P+
Sbjct: 154 LAMNGVDISV--SEGEGGNGLFSVIGNLLFPFIAFAGLFFLFRRSQGGPGGPGGLGGPMD 211
Query: 213 FGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGP 272
FG+SK+KFQ P TGVTF DVAG D+AK + EVV+FLK P+++TA+GA+IPKG LLVGP
Sbjct: 212 FGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGP 271
Query: 273 PGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEI 332
PGTGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVR LF+ AK APCIVF+DEI
Sbjct: 272 PGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRHLFENAKSKAPCIVFIDEI 331
Query: 333 DAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRF 392
DAVGRQRG G+GGGNDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLRPG+F
Sbjct: 332 DAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGKF 391
Query: 393 DRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILAG 452
DRQVTVD PD+ GR IL+VH K DV D IA RTPGF+GADL NL+NEAAILA
Sbjct: 392 DRQVTVDRPDVAGRVRILQVHSRGKALAKDVDFDKIARRTPGFTGADLQNLMNEAAILAA 451
Query: 453 RRGKAAISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAICG 500
RR IS EI D+++RI+AG E V++D K K LVAYHE GHA+ G
Sbjct: 452 RRDLKEISKDEISDALERIIAGPEKKNAVVSDEK-KKLVAYHEAGHALVG 500
>sp|D1J722|FTSH_ECTSI ATP-dependent zinc metalloprotease FtsH OS=Ectocarpus siliculosus
GN=ftsH PE=3 SV=1
Length = 661
Score = 449 bits (1156), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/448 (53%), Positives = 305/448 (68%), Gaps = 37/448 (8%)
Query: 74 VGTALLGSGKAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAIS----- 128
VGT L+ ++ + +SY FL YL+ +KKVDL+EN +A+ +A
Sbjct: 33 VGTNLINLKNSHPTQM------VSYDTFLHYLENGAIKKVDLYENAELAVFDAFESLDQN 86
Query: 129 -----PELG----------NRVQRVRVQLPGLSQELLQKFREKNIDFAAHN-AQEDSGSL 172
P L + + + V++P + L+ R+ IDF A+ DS
Sbjct: 87 LLKPVPLLSSDTLFGILNSDEFRPIGVKIPVRNSSLILTLRDYKIDFTAYPIVNFDS--- 143
Query: 173 LFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDD 232
++ ++ L P++LI L S F +++AK Q++ +TGV F D
Sbjct: 144 IWPILSVLLIPVLLIVVYRLFFSEGSNY-------DFFGNLRKARAKIQLDADTGVLFSD 196
Query: 233 VAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPF 292
VAG+DEAKQ+F E V FLK P+ FTA+GA PKGV++VGPPGTGKTLLAKAIAGEAGVPF
Sbjct: 197 VAGIDEAKQEFEEFVSFLKMPQLFTAVGANPPKGVIIVGPPGTGKTLLAKAIAGEAGVPF 256
Query: 293 FSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQ 352
SISGSEFVEMFVG+GASRVRDLF+ A+ N+PCI+F+DEIDA+GRQRGTG+GG NDEREQ
Sbjct: 257 ISISGSEFVEMFVGIGASRVRDLFETAERNSPCILFIDEIDAIGRQRGTGVGGTNDEREQ 316
Query: 353 TLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKV 412
TLNQ+LTEMDGF+ +GIIVIAATNRAD+LDSALLRPGRFDRQ+TV +P+I GR EILKV
Sbjct: 317 TLNQILTEMDGFKPTSGIIVIAATNRADVLDSALLRPGRFDRQITVYLPNIYGRIEILKV 376
Query: 413 HGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILAGRRGKAAISSKEIDDSIDRIV 472
H NK D+ SL IA RT GFSGADLAN+LNEAAIL R I+ K+I +I+RI+
Sbjct: 377 HSRNKNIDSKTSLKFIAQRTAGFSGADLANILNEAAILTARANLETITIKQIYTAIERII 436
Query: 473 AGMEGTVMTDGKSKSLVAYHEVGHAICG 500
AG+EG ++ D ++K LVAYHEVGHA+ G
Sbjct: 437 AGLEGVLLNDSRNKRLVAYHEVGHALTG 464
>sp|Q9BAE0|FTSH_MEDSA ATP-dependent zinc metalloprotease FTSH, chloroplastic OS=Medicago
sativa GN=FTSH PE=2 SV=1
Length = 706
Score = 448 bits (1152), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/409 (58%), Positives = 300/409 (73%), Gaps = 12/409 (2%)
Query: 94 SRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKF 153
S+ YS FL + K +V++V ++G++ + A+ +R V +P +L+
Sbjct: 125 SQWRYSEFLNAVKKGKVERVRFSKDGSVLQLTAVDG------RRANVIVPN-DPDLIDIL 177
Query: 154 REKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAF 213
+D + ++ +G LF+ +G+L P + GLFL+ RR GG GGPGG G P+ F
Sbjct: 178 AMNGVDISVSEGEQGNG--LFSFVGSLLLPFLAFAGLFLIFRRGQGGPGGPGGLGGPMDF 235
Query: 214 GQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPP 273
G+SK+KFQ P TGVTF DVAG D+AK + EVV+FLK P+++TA+GA+IPKG LLVGPP
Sbjct: 236 GRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPP 295
Query: 274 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 333
GTGKTLLA+A+AGEAG PFFS + SEFVE+FVGVGASRVRDLF+KAK APCIVF+DEID
Sbjct: 296 GTGKTLLARAVAGEAGTPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 355
Query: 334 AVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD 393
AVGRQRG G+GGGNDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLRPGRFD
Sbjct: 356 AVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 415
Query: 394 RQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILAGR 453
RQVTVD PD+ GR +IL+VH K DV D IA RTPGF+G DL NL+NEAAILA R
Sbjct: 416 RQVTVDRPDVAGRVKILQVHSRGKALAKDVDFDKIARRTPGFTGVDLQNLMNEAAILAAR 475
Query: 454 RGKAAISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAICG 500
R IS EI D+++RI+AG E V+++ K K LVAYHE GHA+ G
Sbjct: 476 RDLKEISKDEIADALERIIAGPEKKNAVVSEEK-KKLVAYHEAGHALVG 523
>sp|Q39102|FTSH1_ARATH ATP-dependent zinc metalloprotease FTSH 1, chloroplastic
OS=Arabidopsis thaliana GN=FTSH1 PE=1 SV=2
Length = 716
Score = 439 bits (1130), Expect = e-122, Method: Compositional matrix adjust.
Identities = 245/410 (59%), Positives = 303/410 (73%), Gaps = 12/410 (2%)
Query: 94 SRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKF 153
S+ YS FL + K +V++V ++G++ + A+ NR R V +P +L+
Sbjct: 132 SQWRYSEFLNAVKKGKVERVRFSKDGSVVQLTAVD----NR--RASVIVPN-DPDLIDIL 184
Query: 154 REKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFP-LA 212
+D + E SG+ LF +IGNL FPL+ GGLFLL RR+ GG GG G +
Sbjct: 185 AMNGVDISVSEG-ESSGNDLFTVIGNLIFPLLAFGGLFLLFRRAQGGPGGGPGGLGGPMD 243
Query: 213 FGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGP 272
FG+SK+KFQ P TGV+F DVAG D+AK + EVV+FLK P+++TA+GA+IPKG LLVGP
Sbjct: 244 FGRSKSKFQEVPETGVSFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGP 303
Query: 273 PGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEI 332
PGTGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVRDLF+KAK APCIVF+DEI
Sbjct: 304 PGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEI 363
Query: 333 DAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRF 392
DAVGRQRG G+GGGNDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLRPGRF
Sbjct: 364 DAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRF 423
Query: 393 DRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILAG 452
DRQVTVD PD+ GR +IL+VH K DV D +A RTPGF+GADL NL+NEAAILA
Sbjct: 424 DRQVTVDRPDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAA 483
Query: 453 RRGKAAISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAICG 500
RR IS EI D+++RI+AG E V+++ K K LVAYHE GHA+ G
Sbjct: 484 RRELKEISKDEISDALERIIAGPEKKNAVVSEEK-KRLVAYHEAGHALVG 532
>sp|Q5Z974|FTSH1_ORYSJ ATP-dependent zinc metalloprotease FTSH 1, chloroplastic OS=Oryza
sativa subsp. japonica GN=FTSH1 PE=2 SV=1
Length = 686
Score = 435 bits (1118), Expect = e-121, Method: Compositional matrix adjust.
Identities = 239/410 (58%), Positives = 293/410 (71%), Gaps = 11/410 (2%)
Query: 94 SRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKF 153
++ YS FL + K +V++V ++G + + AI G R V P L L
Sbjct: 101 AQWRYSEFLSAVKKGKVERVRFSKDGGLLQLTAID---GRRATVVVPNDPDLIDILATN- 156
Query: 154 REKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFP-LA 212
+I A +A G L F +GNL FP + GLF L RR+ GG G G +
Sbjct: 157 -GVDISVAEGDAAGPGGFLAF--VGNLLFPFLAFAGLFFLFRRAQGGPGAGPGGLGGPMD 213
Query: 213 FGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGP 272
FG+SK+KFQ P TGVTF DVAG D+AK + EVV+FLK P+++TA+GA+IPKG LLVGP
Sbjct: 214 FGRSKSKFQEVPETGVTFVDVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGP 273
Query: 273 PGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEI 332
PGTGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVRDLF+KAK APCIVF+DEI
Sbjct: 274 PGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKAPCIVFIDEI 333
Query: 333 DAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRF 392
DAVGRQRG G+GGGNDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LD+ALLRPGRF
Sbjct: 334 DAVGRQRGAGLGGGNDEREQTINQLLTEMDGFAGNSGVIVLAATNRPDVLDAALLRPGRF 393
Query: 393 DRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILAG 452
DRQVTVD PD+ GR +IL+VH K DV + IA RTPGF+GADL NL+NEAAILA
Sbjct: 394 DRQVTVDRPDVAGRVKILEVHSRGKALAKDVDFEKIARRTPGFTGADLQNLMNEAAILAA 453
Query: 453 RRGKAAISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAICG 500
RR IS EI D+++RI+AG E V+++ K + LVAYHE GHA+ G
Sbjct: 454 RRDLKEISKDEISDALERIIAGPEKKNAVVSEEK-RRLVAYHEAGHALVG 502
>sp|B0K5A3|FTSH1_THEPX ATP-dependent zinc metalloprotease FtsH 1 OS=Thermoanaerobacter sp.
(strain X514) GN=ftsH1 PE=3 SV=1
Length = 611
Score = 425 bits (1093), Expect = e-118, Method: Compositional matrix adjust.
Identities = 221/407 (54%), Positives = 290/407 (71%), Gaps = 15/407 (3%)
Query: 96 MSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFRE 155
+ Y + ++Y+D ++VK + L N +++ E +RV V + ++ +LQ
Sbjct: 38 IDYGQLIKYIDANQVKSITLVGNDVKGVLKN-GTEFKSRVPDVTNFMSFVNPYILQG--- 93
Query: 156 KNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAFGQ 215
+DF + + ++ +L +I I ++ +++ GG G ++FG+
Sbjct: 94 -KLDFKSE--PQVGPPWWVQMLPSLFLIVIFIIFWYIFMQQAQGGGGSK-----VMSFGK 145
Query: 216 SKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGT 275
S+A+ + + VTF+DVAG DE K++ E+VEFLK P++F +GARIPKGVLLVGPPGT
Sbjct: 146 SRARMITDKDKRVTFNDVAGADEEKEELQEIVEFLKYPKKFLELGARIPKGVLLVGPPGT 205
Query: 276 GKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 335
GKTLLAKA+AGEAGVPFFSISGS+FVEMFVGVGA+RVRDLF +AK+NAPCIVF+DEIDAV
Sbjct: 206 GKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGAARVRDLFDQAKKNAPCIVFIDEIDAV 265
Query: 336 GRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQ 395
GRQRG G+GGG+DEREQTLNQLL EMDGF N GIIVIAATNR DILD ALLRPGRFDR
Sbjct: 266 GRQRGAGLGGGHDEREQTLNQLLVEMDGFSVNEGIIVIAATNRPDILDPALLRPGRFDRH 325
Query: 396 VTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILAGRRG 455
+TV +PDI+GR EILK+H NK DVSL V+A RTPGF+GADL NL+NEAA+LA RRG
Sbjct: 326 ITVGIPDIKGREEILKIHSRNKPLAPDVSLQVLARRTPGFTGADLENLMNEAALLAARRG 385
Query: 456 KAAISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAICG 500
I+ E++++I R++AG E +M++ K K LVAYHE GHA+
Sbjct: 386 LKQITMAELEEAITRVIAGPEKRSRIMSE-KDKKLVAYHEAGHAVVA 431
>sp|Q67JH0|FTSH3_SYMTH ATP-dependent zinc metalloprotease FtsH 3 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH3 PE=3 SV=1
Length = 626
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/444 (50%), Positives = 303/444 (68%), Gaps = 33/444 (7%)
Query: 64 FLKKLVGNVGVGTALLGSGKAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAI 123
++ LV +V + L G+ + ++++ YS + Y+ + V+ + L +G A
Sbjct: 11 YMLILVISVAIAVQLGGTSQ--------QTTQLVYSDLVRYIQQGEVRSITL--SGAYAE 60
Query: 124 VEAISPELGNRVQRVRVQLPGLSQ-----ELLQKFREKNIDFAAHNAQEDSGSLLFNLIG 178
E +S E + VQLP S E+LQ+ +DF ++D+ S ++ ++
Sbjct: 61 GELVSGE------KFTVQLPPSSSQAPLVEMLQQHPNIKLDF-----RQDNTSGIWAMLL 109
Query: 179 NLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDE 238
P++L+ F + + G G + FG+S+A+ + VTFDDVAG+DE
Sbjct: 110 QTLVPVVLVLLAFFFIMQQTQGSGN-----RVMQFGKSRARLVTDDRKRVTFDDVAGIDE 164
Query: 239 AKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGS 298
K++ E+V+FLK P+R+ +GARIPKGVLL GPPGTGKTLLAKA+AGEAGVPFFSISGS
Sbjct: 165 VKEELAEIVDFLKHPKRYLELGARIPKGVLLYGPPGTGKTLLAKAVAGEAGVPFFSISGS 224
Query: 299 EFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLL 358
+FVEMFVGVGASRVRDLF++AK+N+PCIVF+DEIDAVGRQRG G GGG+DEREQTLNQLL
Sbjct: 225 DFVEMFVGVGASRVRDLFEQAKKNSPCIVFIDEIDAVGRQRGAGYGGGHDEREQTLNQLL 284
Query: 359 TEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKK 418
EMDGF N GII+IAATNR D+LD ALLRPGRFDRQ+ +D PD++GR I +VH K
Sbjct: 285 VEMDGFSANEGIIIIAATNRPDVLDPALLRPGRFDRQIVIDRPDLKGRLAIFQVHAKGKP 344
Query: 419 FDADVSLDVIAMRTPGFSGADLANLLNEAAILAGRRGKAAISSKEIDDSIDRIVAG--ME 476
+ DV L+V+A RTPGF+GAD+ANL+NEAA+LA RR K IS ++++D+IDR++AG +
Sbjct: 345 LEPDVDLEVLAKRTPGFTGADIANLMNEAALLAARRRKKKISMQDVEDAIDRVLAGGPEK 404
Query: 477 GTVMTDGKSKSLVAYHEVGHAICG 500
+ + K K + AYHE GHA+ G
Sbjct: 405 KSRVISEKEKRVTAYHEAGHAVVG 428
>sp|A1URA3|FTSH_BARBK ATP-dependent zinc metalloprotease FtsH OS=Bartonella bacilliformis
(strain ATCC 35685 / KC583) GN=ftsH PE=3 SV=1
Length = 764
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/419 (52%), Positives = 287/419 (68%), Gaps = 25/419 (5%)
Query: 87 DEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNR--VQRVRVQLPG 144
+ Q S+ +SYS FL+ +D + +K V + G + ++ + +R + + PG
Sbjct: 28 NRQRASNGEVSYSEFLQKIDNNELKTVTI--QG-----QKLTGQTADRRMISTYAPRDPG 80
Query: 145 LSQELLQKFREKNIDFAAHNAQEDSG-SLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGG 203
L +Q+ ++ A E SG S+ NL+ +L LI++G R+ GG G
Sbjct: 81 L----VQRLNTNKVNIRA--VPESSGNSIFLNLLFSLLPVLIIVGAWIFFMRQMQGGSRG 134
Query: 204 PGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARI 263
L FG+SKAK E VTF DVAGV+EAKQD E+V+FL++P++F +G RI
Sbjct: 135 A------LGFGKSKAKLLTEAQGRVTFKDVAGVEEAKQDLQEIVDFLREPQKFQRLGGRI 188
Query: 264 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA 323
P+GVLLVGPPGTGKTLLA++IAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+NA
Sbjct: 189 PRGVLLVGPPGTGKTLLARSIAGEANVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNA 248
Query: 324 PCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILD 383
PCI+F+DEIDAVGR RG G+GGGNDEREQTLNQLL EMDGFE N II+IAATNR D+LD
Sbjct: 249 PCIIFIDEIDAVGRHRGAGLGGGNDEREQTLNQLLVEMDGFEPNESIILIAATNRPDVLD 308
Query: 384 SALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANL 443
ALLRPGRFDRQV V PD+ GR +IL+VH N +V+L V+A TPGFSGADL NL
Sbjct: 309 PALLRPGRFDRQVVVPNPDVAGREKILEVHVRNVPLAPNVNLRVLARGTPGFSGADLMNL 368
Query: 444 LNEAAILAGRRGKAAISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAICG 500
+NEAA++A R K ++ +E +D+ D+++ G E T MT + K L AYHE GHAI
Sbjct: 369 VNEAALMAASRNKKVVTMQEFEDAKDKVMMGAERRSTAMTQ-EEKELTAYHEAGHAIVA 426
>sp|P37476|FTSH_BACSU ATP-dependent zinc metalloprotease FtsH OS=Bacillus subtilis
(strain 168) GN=ftsH PE=1 SV=1
Length = 637
Score = 415 bits (1066), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/297 (68%), Positives = 238/297 (80%), Gaps = 1/297 (0%)
Query: 205 GGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIP 264
GG + FG+SKAK E V F DVAG DE KQ+ +EVVEFLK P +F +GARIP
Sbjct: 135 GGGSRVMNFGKSKAKLYTEEKKRVKFKDVAGADEEKQELVEVVEFLKDPRKFAELGARIP 194
Query: 265 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 324
KGVLLVGPPGTGKTLLAKA AGEAGVPFFSISGS+FVEMFVGVGASRVRDLF+ AK+NAP
Sbjct: 195 KGVLLVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAP 254
Query: 325 CIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDS 384
C++F+DEIDAVGRQRG G+GGG+DEREQTLNQLL EMDGF N GII+IAATNRADILD
Sbjct: 255 CLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDP 314
Query: 385 ALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLL 444
ALLRPGRFDRQ+TVD PD+ GR +LKVH NK D V+L IAMRTPGFSGADL NLL
Sbjct: 315 ALLRPGRFDRQITVDRPDVIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLL 374
Query: 445 NEAAILAGRRGKAAISSKEIDDSIDRIVAG-MEGTVMTDGKSKSLVAYHEVGHAICG 500
NEAA++A R+ K I +++ID++ DR++AG + + + K +++VAYHE GH + G
Sbjct: 375 NEAALVAARQNKKKIDARDIDEATDRVIAGPAKKSRVISKKERNIVAYHEGGHTVIG 431
>sp|B8D065|FTSH_HALOH ATP-dependent zinc metalloprotease FtsH OS=Halothermothrix orenii
(strain H 168 / OCM 544 / DSM 9562) GN=ftsH PE=3 SV=1
Length = 630
Score = 414 bits (1063), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/406 (52%), Positives = 288/406 (70%), Gaps = 19/406 (4%)
Query: 97 SYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREK 156
+YS + Y+++ ++ +V + N EA+ +R V + P +L+ + RE
Sbjct: 45 TYSDLINYVEQGKINEVTIIGN------EAVKGTYNHREFNVPIP-PEAVPDLMAELREA 97
Query: 157 NIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAFGQS 216
+++ E + ++ + ++LIG F + +R GG G ++FG+S
Sbjct: 98 DVEIKTE--PEPTAPWWTGMLAYILPIILLIGAWFFIMQRMQGG-----GSQM-MSFGKS 149
Query: 217 KAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTG 276
+A+ E VTF+DVA +E K++ EVVEFLK P++FT +GA++PKGVLLVGPPGTG
Sbjct: 150 RARLS-ENGKKVTFEDVANYEEVKEELQEVVEFLKNPDKFTRMGAKVPKGVLLVGPPGTG 208
Query: 277 KTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVG 336
KTLLA+A+AGEAGVPFF ISGS+FVEMFVGVGASRVRDLF++ K+NAPCI+F+DE+DAVG
Sbjct: 209 KTLLARAVAGEAGVPFFIISGSDFVEMFVGVGASRVRDLFEQGKKNAPCIIFIDELDAVG 268
Query: 337 RQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQV 396
RQRG G+GGG+DEREQTLNQLL EMDGFE N GIIV+AATNR D+LD ALLRPGRFDRQV
Sbjct: 269 RQRGAGLGGGHDEREQTLNQLLVEMDGFEPNEGIIVMAATNRPDVLDPALLRPGRFDRQV 328
Query: 397 TVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILAGRRGK 456
VD PD++GR ILK+H NK DV ++V+A RTPGF+GAD+ NL NEAAILA RR K
Sbjct: 329 VVDKPDVKGRMGILKIHLRNKPVADDVDVEVLAKRTPGFTGADMENLANEAAILAVRRRK 388
Query: 457 AAISSKEIDDSIDRIVAG--MEGTVMTDGKSKSLVAYHEVGHAICG 500
I+ ++ DD+ID+++AG + VM++ + + LVAYHE GHA+ G
Sbjct: 389 NKITMEDFDDAIDKVIAGPAKKSKVMSE-RERKLVAYHETGHALVG 433
>sp|B8H444|FTSH_CAUCN ATP-dependent zinc metalloprotease FtsH OS=Caulobacter crescentus
(strain NA1000 / CB15N) GN=ftsH PE=2 SV=1
Length = 626
Score = 413 bits (1061), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/411 (53%), Positives = 286/411 (69%), Gaps = 21/411 (5%)
Query: 92 SSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQ 151
SSS +SYS+ L+ +D ++K + IA ++ N+ + V P S+EL+
Sbjct: 30 SSSEISYSQLLKDVDAGKIKSAE------IAGQTVLAKTADNKT--LTVNAPMNSEELVN 81
Query: 152 KFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFL-LSRRSSGGMGGPGGPGFP 210
+ KN D + SGS+ F I P++L+ G++L L R+ GG G G
Sbjct: 82 RMVAKNADV-----KFKSGSISFLAILVQLLPILLVVGVWLFLMRQMQGGAKGAMG---- 132
Query: 211 LAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLV 270
FG+SKA+ E +TF+DVAGVDEAK++ EVV+FLK P +F +G +IPKG LLV
Sbjct: 133 --FGKSKARLLTENKNRITFEDVAGVDEAKEELQEVVDFLKDPAKFQRLGGKIPKGALLV 190
Query: 271 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD 330
GPPGTGKTL+A+A+AGEAGVPFF+ISGS+FVEMFVGVGASRVRD+F++AK+NAPCI+F+D
Sbjct: 191 GPPGTGKTLIARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFID 250
Query: 331 EIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPG 390
EIDAVGR RG G+GGGNDEREQTLNQLL EMDGFE N GII+IAATNR D+LD ALLRPG
Sbjct: 251 EIDAVGRHRGAGLGGGNDEREQTLNQLLVEMDGFEANEGIILIAATNRPDVLDPALLRPG 310
Query: 391 RFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAIL 450
RFDRQV V PD+ GR +I++VH N ADV + +A TPGFSGADLANL+NEAA++
Sbjct: 311 RFDRQVVVPNPDVAGREKIIRVHMKNVPLAADVDVKTLARGTPGFSGADLANLVNEAALM 370
Query: 451 AGRRGKAAISSKEIDDSIDRIVAGMEGTVMT-DGKSKSLVAYHEVGHAICG 500
A R+ + ++ ++ + + D+++ G E M + + K L AYHE GHAI
Sbjct: 371 AARKNRRMVTMQDFEQAKDKVMMGAERRSMAMNEEEKKLTAYHEGGHAIVA 421
>sp|P94304|FTSH_BACPE ATP-dependent zinc metalloprotease FtsH OS=Bacillus pseudofirmus
(strain OF4) GN=ftsH PE=3 SV=2
Length = 679
Score = 412 bits (1060), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/297 (67%), Positives = 236/297 (79%), Gaps = 1/297 (0%)
Query: 205 GGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIP 264
GG + FG+SKAK E F DVAG DE KQ+ +EVVEFLK P +F+AIGARIP
Sbjct: 140 GGGSRVMNFGKSKAKMVNEDKKKAKFKDVAGADEEKQELVEVVEFLKDPRKFSAIGARIP 199
Query: 265 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 324
KGVLLVGPPGTGKTLLA+A+AGEAGVPFFSISGS+FVEMFVGVGASRVRDLF+ AK+NAP
Sbjct: 200 KGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAP 259
Query: 325 CIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDS 384
CI+F+DEIDAVGRQRG G+GGG+DEREQTLNQLL EMDGF N GII+IAATNRADILD
Sbjct: 260 CIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDP 319
Query: 385 ALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLL 444
ALLRPGRFDRQ+ V+ PD+ GR E+LKVH NK + DV+L IA RTPGFSGADL NLL
Sbjct: 320 ALLRPGRFDRQIQVNRPDVNGREEVLKVHARNKPLNDDVNLKTIATRTPGFSGADLENLL 379
Query: 445 NEAAILAGRRGKAAISSKEIDDSIDRIVAG-MEGTVMTDGKSKSLVAYHEVGHAICG 500
NEAA++A R IS I+++IDR++AG + + + K K +VA+HE GH + G
Sbjct: 380 NEAALVAARHDHTKISMIHIEEAIDRVIAGPAKKSRVISPKEKKIVAWHEAGHTVVG 436
>sp|P63343|FTSH_SALTY ATP-dependent zinc metalloprotease FtsH OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=ftsH PE=3 SV=1
Length = 644
Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/409 (53%), Positives = 281/409 (68%), Gaps = 20/409 (4%)
Query: 95 RMSYSRFLEYLDKDRVKKVDLFENG-TIAIVEAISPELGNRVQRVRVQLPGLSQELLQKF 153
++ YS FL+ +++D+V++ + NG I + + S R +P +LL
Sbjct: 31 KVDYSTFLQEVNQDQVREARI--NGREINVTKKDS-------NRYTTYIPINDPKLLDNL 81
Query: 154 REKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAF 213
KN+ +E S L I FP++L+ G+++ R G GG G ++F
Sbjct: 82 LTKNVKVVGEPPEEPS---LLASIFISWFPMLLLIGVWIFFMRQMQGGGGKGA----MSF 134
Query: 214 GQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPP 273
G+SKA+ E TF DVAG DEAK++ E+VE+L++P RF +G +IPKGVL+VGPP
Sbjct: 135 GKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPP 194
Query: 274 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 333
GTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ APCI+F+DEID
Sbjct: 195 GTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEID 254
Query: 334 AVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD 393
AVGRQRG G+GGG+DEREQTLNQ+L EMDGFEGN GIIVIAATNR D+LD ALLRPGRFD
Sbjct: 255 AVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFD 314
Query: 394 RQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILAGR 453
RQV V +PD+RGR +ILKVH D+ +IA TPGFSGADLANL+NEAA+ A R
Sbjct: 315 RQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAAR 374
Query: 454 RGKAAISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAICG 500
K +S E + + D+I+ G E VMT+ + +S AYHE GHAI G
Sbjct: 375 GNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKES-TAYHEAGHAIIG 422
>sp|P63344|FTSH_SALTI ATP-dependent zinc metalloprotease FtsH OS=Salmonella typhi GN=ftsH
PE=3 SV=1
Length = 644
Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/409 (53%), Positives = 281/409 (68%), Gaps = 20/409 (4%)
Query: 95 RMSYSRFLEYLDKDRVKKVDLFENG-TIAIVEAISPELGNRVQRVRVQLPGLSQELLQKF 153
++ YS FL+ +++D+V++ + NG I + + S R +P +LL
Sbjct: 31 KVDYSTFLQEVNQDQVREARI--NGREINVTKKDS-------NRYTTYIPINDPKLLDNL 81
Query: 154 REKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAF 213
KN+ +E S L I FP++L+ G+++ R G GG G ++F
Sbjct: 82 LTKNVKVVGEPPEEPS---LLASIFISWFPMLLLIGVWIFFMRQMQGGGGKGA----MSF 134
Query: 214 GQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPP 273
G+SKA+ E TF DVAG DEAK++ E+VE+L++P RF +G +IPKGVL+VGPP
Sbjct: 135 GKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPP 194
Query: 274 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 333
GTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ APCI+F+DEID
Sbjct: 195 GTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEID 254
Query: 334 AVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD 393
AVGRQRG G+GGG+DEREQTLNQ+L EMDGFEGN GIIVIAATNR D+LD ALLRPGRFD
Sbjct: 255 AVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFD 314
Query: 394 RQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILAGR 453
RQV V +PD+RGR +ILKVH D+ +IA TPGFSGADLANL+NEAA+ A R
Sbjct: 315 RQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAAR 374
Query: 454 RGKAAISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAICG 500
K +S E + + D+I+ G E VMT+ + +S AYHE GHAI G
Sbjct: 375 GNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKES-TAYHEAGHAIIG 422
>sp|Q8X9L0|FTSH_ECO57 ATP-dependent zinc metalloprotease FtsH OS=Escherichia coli O157:H7
GN=ftsH PE=3 SV=1
Length = 644
Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/409 (53%), Positives = 280/409 (68%), Gaps = 20/409 (4%)
Query: 95 RMSYSRFLEYLDKDRVKKVDLFENG-TIAIVEAISPELGNRVQRVRVQLPGLSQELLQKF 153
++ YS FL+ ++ D+V++ + NG I + + S R +P +LL
Sbjct: 31 KVDYSTFLQEVNNDQVREARI--NGREINVTKKDS-------NRYTTYIPVQDPKLLDNL 81
Query: 154 REKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAF 213
KN+ +E S L I FP++L+ G+++ R G GG G ++F
Sbjct: 82 LTKNVKVVGEPPEEPS---LLASIFISWFPMLLLIGVWIFFMRQMQGGGGKGA----MSF 134
Query: 214 GQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPP 273
G+SKA+ E TF DVAG DEAK++ E+VE+L++P RF +G +IPKGVL+VGPP
Sbjct: 135 GKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPP 194
Query: 274 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 333
GTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ APCI+F+DEID
Sbjct: 195 GTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEID 254
Query: 334 AVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD 393
AVGRQRG G+GGG+DEREQTLNQ+L EMDGFEGN GIIVIAATNR D+LD ALLRPGRFD
Sbjct: 255 AVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFD 314
Query: 394 RQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILAGR 453
RQV V +PD+RGR +ILKVH D+ +IA TPGFSGADLANL+NEAA+ A R
Sbjct: 315 RQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAAR 374
Query: 454 RGKAAISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAICG 500
K +S E + + D+I+ G E VMT+ + +S AYHE GHAI G
Sbjct: 375 GNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKES-TAYHEAGHAIIG 422
>sp|P0AAI4|FTSH_SHIFL ATP-dependent zinc metalloprotease FtsH OS=Shigella flexneri
GN=ftsH PE=3 SV=1
Length = 644
Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/409 (53%), Positives = 280/409 (68%), Gaps = 20/409 (4%)
Query: 95 RMSYSRFLEYLDKDRVKKVDLFENG-TIAIVEAISPELGNRVQRVRVQLPGLSQELLQKF 153
++ YS FL+ ++ D+V++ + NG I + + S R +P +LL
Sbjct: 31 KVDYSTFLQEVNNDQVREARI--NGREINVTKKDS-------NRYTTYIPVQDPKLLDNL 81
Query: 154 REKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAF 213
KN+ +E S L I FP++L+ G+++ R G GG G ++F
Sbjct: 82 LTKNVKVVGEPPEEPS---LLASIFISWFPMLLLIGVWIFFMRQMQGGGGKGA----MSF 134
Query: 214 GQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPP 273
G+SKA+ E TF DVAG DEAK++ E+VE+L++P RF +G +IPKGVL+VGPP
Sbjct: 135 GKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPP 194
Query: 274 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 333
GTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ APCI+F+DEID
Sbjct: 195 GTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEID 254
Query: 334 AVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD 393
AVGRQRG G+GGG+DEREQTLNQ+L EMDGFEGN GIIVIAATNR D+LD ALLRPGRFD
Sbjct: 255 AVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFD 314
Query: 394 RQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILAGR 453
RQV V +PD+RGR +ILKVH D+ +IA TPGFSGADLANL+NEAA+ A R
Sbjct: 315 RQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAAR 374
Query: 454 RGKAAISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAICG 500
K +S E + + D+I+ G E VMT+ + +S AYHE GHAI G
Sbjct: 375 GNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKES-TAYHEAGHAIIG 422
>sp|P0AAI3|FTSH_ECOLI ATP-dependent zinc metalloprotease FtsH OS=Escherichia coli (strain
K12) GN=ftsH PE=1 SV=1
Length = 644
Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/409 (53%), Positives = 280/409 (68%), Gaps = 20/409 (4%)
Query: 95 RMSYSRFLEYLDKDRVKKVDLFENG-TIAIVEAISPELGNRVQRVRVQLPGLSQELLQKF 153
++ YS FL+ ++ D+V++ + NG I + + S R +P +LL
Sbjct: 31 KVDYSTFLQEVNNDQVREARI--NGREINVTKKDS-------NRYTTYIPVQDPKLLDNL 81
Query: 154 REKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAF 213
KN+ +E S L I FP++L+ G+++ R G GG G ++F
Sbjct: 82 LTKNVKVVGEPPEEPS---LLASIFISWFPMLLLIGVWIFFMRQMQGGGGKGA----MSF 134
Query: 214 GQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPP 273
G+SKA+ E TF DVAG DEAK++ E+VE+L++P RF +G +IPKGVL+VGPP
Sbjct: 135 GKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPP 194
Query: 274 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 333
GTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ APCI+F+DEID
Sbjct: 195 GTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEID 254
Query: 334 AVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD 393
AVGRQRG G+GGG+DEREQTLNQ+L EMDGFEGN GIIVIAATNR D+LD ALLRPGRFD
Sbjct: 255 AVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFD 314
Query: 394 RQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILAGR 453
RQV V +PD+RGR +ILKVH D+ +IA TPGFSGADLANL+NEAA+ A R
Sbjct: 315 RQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAAR 374
Query: 454 RGKAAISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAICG 500
K +S E + + D+I+ G E VMT+ + +S AYHE GHAI G
Sbjct: 375 GNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKES-TAYHEAGHAIIG 422
>sp|C6V4R9|FTSH_NEORI ATP-dependent zinc metalloprotease FtsH OS=Neorickettsia risticii
(strain Illinois) GN=ftsH PE=3 SV=1
Length = 636
Score = 407 bits (1047), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/413 (50%), Positives = 290/413 (70%), Gaps = 21/413 (5%)
Query: 90 GVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQEL 149
G+ + ++ +S FL+ ++K V+K+ + ++++ G R Q EL
Sbjct: 32 GIRNEKIQFSEFLDLVEKGEVQKIVIEGYDISGVLKS-----GTRFYTKATQY----TEL 82
Query: 150 LQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGG--LFLLSRRSSGGMGGPGGP 207
+ R+ N+DF + G LLFN++ + FP++L+ G +F + + +GG
Sbjct: 83 IPLLRKNNVDFQVASGDSFLG-LLFNILISW-FPMLLLIGVWIFFMKQMQAGG------- 133
Query: 208 GFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGV 267
+ FG+SKA+ + + VTF DVAG+DEAK++ E+VEFL++P++F +G +IPKG
Sbjct: 134 NKTMTFGKSKARLLSDRSNKVTFHDVAGIDEAKEELAEIVEFLREPKKFQKLGGKIPKGC 193
Query: 268 LLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIV 327
LL+GPPGTGKTLLAKAIAGEA VPFFSISGS+FVEMFVGVGASRVRD+F++ K+NAPC++
Sbjct: 194 LLIGPPGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLI 253
Query: 328 FVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALL 387
F+DEIDAVGR RG G GGGNDEREQTLNQLL EMDGFE N G+I+IAATNR D+LD ALL
Sbjct: 254 FIDEIDAVGRHRGVGFGGGNDEREQTLNQLLVEMDGFEANEGVIIIAATNRPDVLDPALL 313
Query: 388 RPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEA 447
RPGRFDRQ+T+ +PDI GR +IL+VH +V + +IA TPGFSGADLANL+NE+
Sbjct: 314 RPGRFDRQITISIPDIAGRQKILEVHLKKIPTAPNVEVSIIARGTPGFSGADLANLVNES 373
Query: 448 AILAGRRGKAAISSKEIDDSIDRIVAGME-GTVMTDGKSKSLVAYHEVGHAIC 499
A++A RR K +++++ + + D+I+ GME +++ + K L AYHE GHA+
Sbjct: 374 ALIAARRNKKVVTNEDFEYARDKILMGMERKSLVMREEEKLLTAYHEAGHAVT 426
>sp|C5CES8|FTSH_KOSOT ATP-dependent zinc metalloprotease FtsH OS=Kosmotoga olearia
(strain TBF 19.5.1) GN=ftsH PE=3 SV=1
Length = 645
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 209/408 (51%), Positives = 280/408 (68%), Gaps = 12/408 (2%)
Query: 96 MSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFRE 155
+ Y+RFLE ++ ++ K+ ++++G I + E R +V LS + Q + +
Sbjct: 36 VPYNRFLEDVNDKKIIKIVIYDDGRIVYT---TSESSKRSLETKVSPQTLSTDRFQNYID 92
Query: 156 KNIDFAAHNAQEDSGSLLF--NLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAF 213
+ + + E LF NL+G + PL +I ++ + RS G F
Sbjct: 93 QLVTDGVNVVYEKGNDSLFWVNLLGTI-IPLAIIVFIWFFAMRSLSGRNSQA-----FTF 146
Query: 214 GQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPP 273
+S AK + + VTF DVAGVDEA ++ + V +LK P F+ GAR+PKG+LLVGPP
Sbjct: 147 TKSPAKKYLSNDKNVTFKDVAGVDEAIEELQDAVNYLKNPNAFSQTGARMPKGILLVGPP 206
Query: 274 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 333
GTGKTLLA+A+AGEA VPFF ISGS+FVE+FVGVGA+RVRDLF +AK +AP I+F+DEID
Sbjct: 207 GTGKTLLARAVAGEANVPFFYISGSDFVELFVGVGAARVRDLFSQAKASAPSIIFIDEID 266
Query: 334 AVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD 393
AVGR RG G+GGG+DEREQTLNQ+L EMDGF+ TG+IV+AATNR DILD ALLRPGRFD
Sbjct: 267 AVGRHRGAGLGGGHDEREQTLNQILVEMDGFDAKTGVIVMAATNRPDILDHALLRPGRFD 326
Query: 394 RQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILAGR 453
+++TVD PD++GR EILK+H K D DV + ++A RTPGF GADL NL+NEAAILA R
Sbjct: 327 KKITVDPPDVKGRAEILKIHMRGKPVDPDVDVWLLARRTPGFVGADLENLVNEAAILAAR 386
Query: 454 RGKAAISSKEIDDSIDRIVAG-MEGTVMTDGKSKSLVAYHEVGHAICG 500
R K I KE++++IDR++AG + + + K K +VAYHE+GHAI G
Sbjct: 387 RKKKIIGMKELEEAIDRVIAGPARKSRIMNPKEKKIVAYHELGHAIVG 434
>sp|B8J992|FTSH_ANAD2 ATP-dependent zinc metalloprotease FtsH OS=Anaeromyxobacter
dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=ftsH PE=3
SV=1
Length = 706
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/369 (55%), Positives = 267/369 (72%), Gaps = 7/369 (1%)
Query: 132 GNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLF 191
G + V ++PG +L+Q + + + A A G L + I +A L+ +
Sbjct: 113 GQALPYVATRIPGGGDDLVQAVEKAGVPYDA-VAGGGMGDLFWVWIAPIAIGLLFWAWVM 171
Query: 192 LLSRRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLK 251
RR SG +G G PG +AFG+S+A+ MEP+TGVTF D AG+DEA ++ E+VEFLK
Sbjct: 172 ---RRMSGQLGQ-GPPGV-MAFGKSRARIHMEPDTGVTFQDAAGIDEAVEELQEIVEFLK 226
Query: 252 KPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASR 311
PE++ +G RIPKGVLLVGPPGTGKTLLA+A AGEAGVPFFS+SGSEFVEMFVGVGA+R
Sbjct: 227 TPEKYRRLGGRIPKGVLLVGPPGTGKTLLARATAGEAGVPFFSLSGSEFVEMFVGVGAAR 286
Query: 312 VRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGII 371
VRDLF +A + APCIVF+DE+DA+G+ R GI GG+DEREQTLNQLL EMDGF+ G+I
Sbjct: 287 VRDLFAQATQKAPCIVFIDELDALGKSRNAGIMGGHDEREQTLNQLLAEMDGFDARAGLI 346
Query: 372 VIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMR 431
++ ATNR +ILD ALLRPGRFDRQV VD PD RGR +IL++H N K DV L +A R
Sbjct: 347 IMGATNRPEILDPALLRPGRFDRQVLVDRPDKRGREQILRIHARNVKLGPDVDLRSVAAR 406
Query: 432 TPGFSGADLANLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGME-GTVMTDGKSKSLVA 490
TPGF+GADLAN++NEAA+LA RR K ++ E +++I+R+VAG+E + + + K +VA
Sbjct: 407 TPGFAGADLANVVNEAALLAARRNKNHVTRAEFEEAIERVVAGLEKKSRRINEREKEIVA 466
Query: 491 YHEVGHAIC 499
+HE GHA+
Sbjct: 467 FHEAGHALV 475
>sp|B9KXV3|FTSH1_THERP ATP-dependent zinc metalloprotease FtsH 1 OS=Thermomicrobium roseum
(strain ATCC 27502 / DSM 5159 / P-2) GN=ftsH1 PE=3 SV=1
Length = 652
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/291 (67%), Positives = 235/291 (80%), Gaps = 1/291 (0%)
Query: 211 LAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLV 270
L+FG+S+A+ VTFDDVAGVDEAK++ E+VEFLK PE+F A+GARIP+GVLLV
Sbjct: 143 LSFGKSRARVFTSNRPTVTFDDVAGVDEAKEELQEIVEFLKYPEKFAALGARIPRGVLLV 202
Query: 271 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD 330
GPPGTGKTLL++A+AGEAGVPFFSISGSEFVEMFVGVGASRVRDLF +AK NAPCIVF+D
Sbjct: 203 GPPGTGKTLLSRAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKRNAPCIVFID 262
Query: 331 EIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPG 390
EIDAVGRQRG G+GG +DEREQTLNQ+L EMDGF+ +T +IVIAATNR D+LD ALLRPG
Sbjct: 263 EIDAVGRQRGAGLGGSHDEREQTLNQILVEMDGFDSSTNVIVIAATNRPDVLDPALLRPG 322
Query: 391 RFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAIL 450
RFDRQV +D PD+ GR ILKVH K ++DV L+ +A +TPGFSGADL NL+NEAAIL
Sbjct: 323 RFDRQVVLDRPDLHGRLAILKVHTRGKPLESDVDLEDLARQTPGFSGADLENLVNEAAIL 382
Query: 451 AGRRGKAAISSKEIDDSIDRIVAGME-GTVMTDGKSKSLVAYHEVGHAICG 500
A RR K I +E+ ++IDR+VAG E + + K + AYHE GHA+
Sbjct: 383 AARRNKKTIGRRELYEAIDRVVAGPERKSRRISEREKLMTAYHEAGHALVA 433
>sp|A0PXM8|FTSH_CLONN ATP-dependent zinc metalloprotease FtsH OS=Clostridium novyi
(strain NT) GN=ftsH PE=3 SV=1
Length = 676
Score = 404 bits (1039), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/416 (51%), Positives = 294/416 (70%), Gaps = 14/416 (3%)
Query: 88 EQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQ-RVRVQLPG-- 144
E +S +SY+ F +Y +++V +V++ ++G ++ EL ++ + + +V +P
Sbjct: 32 ESSKTSGAISYNEFKKYWIENKVSRVEIKQDG-----RTVAGELNDKAKTQFQVVVPQSL 86
Query: 145 LSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGP 204
L Q++L + +++ A S + + I + L+++G + ++S GG GG
Sbjct: 87 LVQDILVNNPKSSVNVKFEPAS--SMPMWISWIPTIILILVMVGFWVMFMQQSQGGGGGN 144
Query: 205 GGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIP 264
G + FG+S+AK + VTF DVAG DE K + E+V+FLK+P+++ +GARIP
Sbjct: 145 RGV---MNFGKSRAKLATPDSQKVTFKDVAGADEEKGELEEIVDFLKEPKKYLDMGARIP 201
Query: 265 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 324
KG+LLVGPPGTGKTLLAKA+AGEAGVPFFSISGS+FVEMFVGVGASRVRDLF++AK+N+P
Sbjct: 202 KGILLVGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNSP 261
Query: 325 CIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDS 384
CI+F+DEIDAVGRQRG G+GGG+DEREQTLNQLL EMDGF N GII++AATNR DILD
Sbjct: 262 CIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGVNEGIILVAATNRPDILDK 321
Query: 385 ALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLL 444
ALLRPGRFDRQ+ V PD +GR E+LKVH NK+ DV L V+A RTPGF GADL NL+
Sbjct: 322 ALLRPGRFDRQILVGAPDAKGREEVLKVHVRNKRLSDDVDLKVLAKRTPGFVGADLENLM 381
Query: 445 NEAAILAGRRGKAAISSKEIDDSIDRIVAGME-GTVMTDGKSKSLVAYHEVGHAIC 499
NEAA+LA R K I +E++++I R++AG E + + + + + AYHE GHAI
Sbjct: 382 NEAALLAVRANKKQIGMEELEEAITRVIAGPEKKSRVIHEEDRKITAYHEAGHAIV 437
>sp|Q4L3G8|FTSH_STAHJ ATP-dependent zinc metalloprotease FtsH OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=ftsH PE=3 SV=1
Length = 727
Score = 403 bits (1036), Expect = e-111, Method: Compositional matrix adjust.
Identities = 218/422 (51%), Positives = 293/422 (69%), Gaps = 14/422 (3%)
Query: 84 AYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLP 143
+Y + G + ++SYS+F+E LDK +K +++ + +V + + +
Sbjct: 23 SYINGNGNTPKQLSYSQFVEKLDKGDLKTLEIQPEQNVYLVSGKTKNDEDYSSTILYNNE 82
Query: 144 GLSQELLQKFR-EKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFL--LSRRSSGG 200
Q++ + + +K +DF +E+ S+ +++ L P+++I LF+ LS+ GG
Sbjct: 83 KDLQKITNEAKSQKGLDFKV--KEEEKQSVFVSMLTTL-IPVLIIAFLFIFFLSQAQGGG 139
Query: 201 MGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIG 260
GG + FG+SKAK V F DVAG DE KQ+ +E+V+FLK ++F +G
Sbjct: 140 GGGR-----MMNFGKSKAKMYDNQKRRVRFSDVAGADEEKQELIEIVDFLKDNKKFKQMG 194
Query: 261 ARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAK 320
+RIPKGVLLVGPPGTGKTLLA+A+AGEAG PFFSISGS+FVEMFVGVGASRVRDLF+ AK
Sbjct: 195 SRIPKGVLLVGPPGTGKTLLARAVAGEAGAPFFSISGSDFVEMFVGVGASRVRDLFENAK 254
Query: 321 ENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRAD 380
+NAPCI+F+DEIDAVGRQRG G+GGG+DEREQTLNQLL EMDGF N GII+IAATNR D
Sbjct: 255 KNAPCIIFIDEIDAVGRQRGAGVGGGHDEREQTLNQLLVEMDGFGENEGIIMIAATNRPD 314
Query: 381 ILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADL 440
ILD ALLRPGRFDRQ+ V PD++GR IL VH NK D V L I+ RTPGFSGADL
Sbjct: 315 ILDPALLRPGRFDRQIQVGRPDVKGREAILHVHSKNKPLDETVDLKAISQRTPGFSGADL 374
Query: 441 ANLLNEAAILAGRRGKAAISSKEIDDSIDRIVAG--MEGTVMTDGKSKSLVAYHEVGHAI 498
NLLNEA+++A R GK I ++I+++ DR++AG + V++D K +++VA+HE GH +
Sbjct: 375 ENLLNEASLIAAREGKNKIDMRDIEEATDRVIAGPAKKSRVISD-KERNIVAHHEAGHTV 433
Query: 499 CG 500
G
Sbjct: 434 IG 435
>sp|P59652|FTSH_STRR6 ATP-dependent zinc metalloprotease FtsH OS=Streptococcus pneumoniae
(strain ATCC BAA-255 / R6) GN=ftsH PE=3 SV=1
Length = 652
Score = 403 bits (1036), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/292 (67%), Positives = 233/292 (79%), Gaps = 1/292 (0%)
Query: 210 PLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLL 269
P++FG+SKAK + + V F DVAG +E KQ+ +EVVEFLK P+RFT +GARIP GVLL
Sbjct: 166 PMSFGRSKAKAANKEDIKVRFSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARIPAGVLL 225
Query: 270 VGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFV 329
GPPGTGKTLLAKA+AGEAGVPFFSISGS+FVEMFVGVGASRVR LF+ AK+ AP I+F+
Sbjct: 226 EGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFI 285
Query: 330 DEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRP 389
DEIDAVGRQRG G+GGGNDEREQTLNQLL EMDGFEGN GIIVIAATNR+D+LD ALLRP
Sbjct: 286 DEIDAVGRQRGVGLGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRP 345
Query: 390 GRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAI 449
GRFDR+V V PD++GR ILKVH NK DV L ++A +TPGF GADL N+LNEAA+
Sbjct: 346 GRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAAL 405
Query: 450 LAGRRGKAAISSKEIDDSIDRIVAGMEGTVMT-DGKSKSLVAYHEVGHAICG 500
+A RR K+ I + +ID++ DR++AG T K + LVAYHE GH I G
Sbjct: 406 VAARRNKSIIDASDIDEAEDRVIAGPSKKDKTVSQKERELVAYHEAGHTIVG 457
>sp|O69076|FTSH_STRPN ATP-dependent zinc metalloprotease FtsH OS=Streptococcus pneumoniae
serotype 4 (strain ATCC BAA-334 / TIGR4) GN=ftsH PE=3
SV=3
Length = 652
Score = 403 bits (1036), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/292 (67%), Positives = 233/292 (79%), Gaps = 1/292 (0%)
Query: 210 PLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLL 269
P++FG+SKAK + + V F DVAG +E KQ+ +EVVEFLK P+RFT +GARIP GVLL
Sbjct: 166 PMSFGRSKAKAANKEDIKVRFSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARIPAGVLL 225
Query: 270 VGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFV 329
GPPGTGKTLLAKA+AGEAGVPFFSISGS+FVEMFVGVGASRVR LF+ AK+ AP I+F+
Sbjct: 226 EGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFI 285
Query: 330 DEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRP 389
DEIDAVGRQRG G+GGGNDEREQTLNQLL EMDGFEGN GIIVIAATNR+D+LD ALLRP
Sbjct: 286 DEIDAVGRQRGVGLGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRP 345
Query: 390 GRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAI 449
GRFDR+V V PD++GR ILKVH NK DV L ++A +TPGF GADL N+LNEAA+
Sbjct: 346 GRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAAL 405
Query: 450 LAGRRGKAAISSKEIDDSIDRIVAGMEGTVMT-DGKSKSLVAYHEVGHAICG 500
+A RR K+ I + +ID++ DR++AG T K + LVAYHE GH I G
Sbjct: 406 VAARRNKSIIDASDIDEAEDRVIAGPSKKDKTVSQKERELVAYHEAGHTIVG 457
>sp|B8G4Q6|FTSH_CHLAD ATP-dependent zinc metalloprotease FtsH OS=Chloroflexus aggregans
(strain MD-66 / DSM 9485) GN=ftsH PE=3 SV=1
Length = 656
Score = 403 bits (1036), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/293 (66%), Positives = 236/293 (80%), Gaps = 4/293 (1%)
Query: 211 LAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLV 270
++FG+S+A+ +TF DVAG +EAKQD E+VEFLK P++F A+GARIP+GVL+V
Sbjct: 149 MSFGKSRARMFAGDKPTITFADVAGQEEAKQDLAEIVEFLKFPDKFAALGARIPRGVLMV 208
Query: 271 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD 330
GPPGTGKTLL++A+AGEAGVPFFSISGSEFVEMFVGVGASRVRDLF +AK NAPCIVF+D
Sbjct: 209 GPPGTGKTLLSRAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKRNAPCIVFID 268
Query: 331 EIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPG 390
EIDAVGRQRG G+GG +DEREQTLNQ+L EMDGF+ NT +IVIAATNR D+LD AL+RPG
Sbjct: 269 EIDAVGRQRGAGLGGSHDEREQTLNQILVEMDGFDTNTNVIVIAATNRPDVLDPALVRPG 328
Query: 391 RFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAIL 450
RFDRQV +D PD+RGR EILKVH K DV+L+++A +TPGFSGADL N++NEAAIL
Sbjct: 329 RFDRQVVLDAPDVRGRIEILKVHVKGKPLAEDVNLEILARQTPGFSGADLMNVVNEAAIL 388
Query: 451 AGRRGKAAISSKEIDDSIDRIVAG---MEGTVMTDGKSKSLVAYHEVGHAICG 500
A RR K IS E D+++R+ G VMTD + K +VAYHE GHAI G
Sbjct: 389 AARRSKRKISMAEFQDAVERVAIGGPERRSRVMTD-RQKLVVAYHEAGHAIVG 440
>sp|D1C1U7|FTSH1_SPHTD ATP-dependent zinc metalloprotease FtsH 1 OS=Sphaerobacter
thermophilus (strain DSM 20745 / S 6022) GN=ftsH1 PE=3
SV=1
Length = 653
Score = 401 bits (1031), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/330 (60%), Positives = 250/330 (75%), Gaps = 10/330 (3%)
Query: 175 NLIGNLAF--PLILIGGLFLLSRRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDD 232
N + L F P + + G+ + R + G ++FG+S+A+ VTF D
Sbjct: 110 NWLSALTFILPTLFLIGIVIFMMRQAQGTNNQA-----ISFGKSRARMFTGNKPTVTFAD 164
Query: 233 VAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPF 292
VAGV+EAK++ +EVVEFLK P++F ++GARIP+GVLLVGPPGTGKTLL++A+AGEAGVPF
Sbjct: 165 VAGVEEAKEELVEVVEFLKYPDKFASLGARIPRGVLLVGPPGTGKTLLSRAVAGEAGVPF 224
Query: 293 FSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQ 352
FSISGSEFVEMFVGVGASRVRDLF +AK NAPCIVF+DEIDAVGRQRG G+GG +DEREQ
Sbjct: 225 FSISGSEFVEMFVGVGASRVRDLFDQAKRNAPCIVFIDEIDAVGRQRGAGLGGSHDEREQ 284
Query: 353 TLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKV 412
TLNQ+L EMDGF+ T +IVIAATNR D+LD ALLRPGRFDRQV +D PDI GR IL+V
Sbjct: 285 TLNQILVEMDGFDSTTNVIVIAATNRPDVLDPALLRPGRFDRQVVLDRPDIAGRRAILEV 344
Query: 413 HGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILAGRRGKAAISSKEIDDSIDRIV 472
H K ++DV L+ +A +TPGFSGADL NL+NEAAILA RR K I +E+ ++IDR++
Sbjct: 345 HSRGKPLESDVDLEELARQTPGFSGADLENLVNEAAILAARRNKKTIGRRELTEAIDRVI 404
Query: 473 AGME--GTVMTDGKSKSLVAYHEVGHAICG 500
AG E V+++ + K + AYHE GHA+
Sbjct: 405 AGPERKSRVLSE-REKLMTAYHEAGHALVA 433
>sp|B2A3Q4|FTSH_NATTJ ATP-dependent zinc metalloprotease FtsH OS=Natranaerobius
thermophilus (strain ATCC BAA-1301 / DSM 18059 /
JW/NM-WN-LF) GN=ftsH PE=3 SV=1
Length = 693
Score = 400 bits (1029), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/406 (54%), Positives = 284/406 (69%), Gaps = 21/406 (5%)
Query: 98 YSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKN 157
Y+ FL ++ V +VD+ E I EL + V + PG EL++ +E
Sbjct: 37 YNEFLNKVEAGEVDRVDITERD-------IEGELTDGTSFV-TRDPG-DPELIETLKEYE 87
Query: 158 IDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAFGQSK 217
++ H E G + + P +L+ +F + S G GG + FG+SK
Sbjct: 88 VNIKDH---EVPGPPWWASLFTYIIPFVLLIAIFFFFMQQSQGGGGRM-----MNFGKSK 139
Query: 218 AKFQM-EPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTG 276
AK + + V F DVAG DE K++ +EVV FLK+P++F +GARIPKGVLLVGPPGTG
Sbjct: 140 AKLHEGDQKSNVKFHDVAGADEEKEELVEVVNFLKEPQKFIDLGARIPKGVLLVGPPGTG 199
Query: 277 KTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVG 336
KTLL +A+AGEAGVPFFSISGS+FVEMFVGVGASRVRDLF+ AK+N+PCIVF+DEIDAVG
Sbjct: 200 KTLLGRAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNSPCIVFIDEIDAVG 259
Query: 337 RQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQV 396
RQRG G+GGG+DEREQTLNQLL EMDGF+ N GIIV+AATNR+DILD AL RPGRFDRQ+
Sbjct: 260 RQRGAGLGGGHDEREQTLNQLLVEMDGFDVNEGIIVMAATNRSDILDPALQRPGRFDRQI 319
Query: 397 TVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTPGFSGADLANLLNEAAILAGRRGK 456
TV+ PD++GR EILKVH +K + +V L V+A RTPGF+GADL NL+NEAAI A RR K
Sbjct: 320 TVNAPDLKGREEILKVHARDKPLEDNVDLKVVARRTPGFTGADLENLVNEAAIYAARRNK 379
Query: 457 AAISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAYHEVGHAICG 500
I KE++ +IDR++AG E V+++ + K +VAYHE GHAI G
Sbjct: 380 NRIGMKELEGAIDRVIAGTEKKSRVISEFE-KKIVAYHEAGHAIVG 424
>sp|Q8K9G8|FTSH_BUCAP ATP-dependent zinc metalloprotease FtsH OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=ftsH PE=3 SV=1
Length = 613
Score = 400 bits (1029), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/429 (50%), Positives = 287/429 (66%), Gaps = 18/429 (4%)
Query: 74 VGTALLGSGKAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGN 133
V T +L S + S+ R+ YS FL +++D+V++ + NG I + +
Sbjct: 10 VITVVLMSVFQNFNSSDTSNHRVDYSTFLSEVNQDQVREA--YINGRI--ISVTKKDSSK 65
Query: 134 RVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLL 193
+ + + P L LL K N+ +E S LL ++ + FP++L+ G+++
Sbjct: 66 YITYIPINDPKLLDNLLTK----NVKIVGEIPEEPS--LLISIFISW-FPMLLLIGVWIF 118
Query: 194 SRRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKP 253
R GG G ++FG+SKA+ E TF DVAG DEAK++ E+VE+LK+P
Sbjct: 119 FMRQMQMGGGKGA----MSFGKSKARMLSEDQIQTTFADVAGCDEAKEEVSELVEYLKEP 174
Query: 254 ERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVR 313
RF +G +IPKG+L+VGPPGTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVR
Sbjct: 175 SRFQKLGGKIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVR 234
Query: 314 DLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVI 373
D+F+ A+++APCI+F+DEIDAVGRQRG G+GGG+DEREQTLNQ+L EMDGF+GN G+I+I
Sbjct: 235 DMFEHARKSAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGVILI 294
Query: 374 AATNRADILDSALLRPGRFDRQVTVDVPDIRGRTEILKVHGSNKKFDADVSLDVIAMRTP 433
AATNR D+LD ALLRPGRFDRQV V +PD+RGR +ILKVH DV +IA TP
Sbjct: 295 AATNRPDVLDPALLRPGRFDRQVIVALPDVRGRKQILKVHMRKVPLSEDVDPMIIARGTP 354
Query: 434 GFSGADLANLLNEAAILAGRRGKAAISSKEIDDSIDRIVAGME--GTVMTDGKSKSLVAY 491
GFSGADLANL+NEAA+ A R +S + + D+I+ G E VM+D + +S AY
Sbjct: 355 GFSGADLANLVNEAALFAARFNNRVVSMIHFEKAKDKIMMGSERRSMVMSDFQKES-TAY 413
Query: 492 HEVGHAICG 500
HE GH I G
Sbjct: 414 HEAGHVIIG 422
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.137 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 189,751,852
Number of Sequences: 539616
Number of extensions: 8656553
Number of successful extensions: 42409
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2438
Number of HSP's successfully gapped in prelim test: 515
Number of HSP's that attempted gapping in prelim test: 37593
Number of HSP's gapped (non-prelim): 3554
length of query: 500
length of database: 191,569,459
effective HSP length: 122
effective length of query: 378
effective length of database: 125,736,307
effective search space: 47528324046
effective search space used: 47528324046
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)