BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 010812
         (500 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225449917|ref|XP_002268974.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Vitis
           vinifera]
 gi|296081305|emb|CBI17749.3| unnamed protein product [Vitis vinifera]
          Length = 553

 Score =  579 bits (1493), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 315/500 (63%), Positives = 372/500 (74%), Gaps = 19/500 (3%)

Query: 1   MSDSKLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESSL 60
           MSDSKL +FGSFTE+ETRS L+          + S  AEKPA  KELQFGS++F T  +L
Sbjct: 4   MSDSKLLLFGSFTEDETRSLLR----------LPSGNAEKPAAKKELQFGSVDFVTGRAL 53

Query: 61  VGTTDEPNGKS-VVDGPVVFQPSTLLKKDDKVKSVGASNDHDLGAVGCPKENGHIKNSTN 119
               +E   ++    GP+ F  S LLKKDD+ KSV   N     A G PKENG + + T+
Sbjct: 54  ASVGNELCRQADSSKGPIDFCSSNLLKKDDETKSVDGVNKLSSEAAGTPKENGGVHDFTH 113

Query: 120 GPALSNGV-NHLKADGIDFSSF--HQNAGGHANPSPISKFHVLCDGNIDGRDQNAAACNS 176
              L NGV N L  D  +  S    QN   H N     + HV+ +     RD N    +S
Sbjct: 114 SSPLGNGVVNELNPDRFNLDSLCLSQNKE-HLNQFQSLESHVVEEECSKERDLNGTIDDS 172

Query: 177 S--ISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR 234
           S  +   KE+ +KA N P  +VK+LLPRGLINSGNLCFLNATLQAL+SC+PF+QLLQELR
Sbjct: 173 STFVPLKKEI-LKAPNGPAPAVKNLLPRGLINSGNLCFLNATLQALLSCTPFIQLLQELR 231

Query: 235 TRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDV 294
            RDIPK GYPTLTAF  FVS+FD P+  S KKK+++ ++ GRPFSP+MFE VLKNFTPDV
Sbjct: 232 IRDIPKVGYPTLTAFAEFVSEFDMPTDLSLKKKDLNGVETGRPFSPAMFEGVLKNFTPDV 291

Query: 295 PNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPK 354
           PN ISGRPRQEDAQEFLSF+MDQMHDELLKL+G  +++NG  ++LVS AE+DEWETVGPK
Sbjct: 292 PNKISGRPRQEDAQEFLSFVMDQMHDELLKLEGFFSNLNGGKSSLVSSAEDDEWETVGPK 351

Query: 355 NKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDA 414
           NKSAVTRTQSF+PS LS IFGGQL+SVVKA+GNKASATVQPFLLLHLDI  EA++TIEDA
Sbjct: 352 NKSAVTRTQSFVPSELSKIFGGQLRSVVKARGNKASATVQPFLLLHLDILPEAIYTIEDA 411

Query: 415 LRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG-SQGSTKLHKS 473
           LRLFSAPE LEGYRTS TG AG+VTA KSVKIQ LS+I+ILHLMRF Y  +QGSTKLHK 
Sbjct: 412 LRLFSAPETLEGYRTSGTGKAGLVTASKSVKIQKLSEIMILHLMRFYYDENQGSTKLHKP 471

Query: 474 VRFPLQLVLGRDLLVTPSAE 493
           V FPL+LVLGR+LLV+P+ E
Sbjct: 472 VTFPLELVLGRELLVSPTTE 491


>gi|255544103|ref|XP_002513114.1| conserved hypothetical protein [Ricinus communis]
 gi|223548125|gb|EEF49617.1| conserved hypothetical protein [Ricinus communis]
          Length = 605

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 291/495 (58%), Positives = 346/495 (69%), Gaps = 39/495 (7%)

Query: 6   LFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESSLVGTTD 65
           + VFGSFTE+ET+SW  ++SS + KKPV         + KELQFGSLNF T  +    + 
Sbjct: 89  VLVFGSFTEDETKSWQANKSSENDKKPV---------QKKELQFGSLNFATGITFGDFSS 139

Query: 66  EPNGK-SVVDGPVVFQPSTLLKKDDKVKSVGASNDHDLGAVGCPKENGHIKNSTNGPALS 124
           E + +    +G V FQ +   KK+  VK    + + +   +G PK+NG I + T+   L+
Sbjct: 140 ESSRQPGSTNGKVSFQSTNPHKKEKDVK---IAINPEPSVLGSPKQNGSIADITHSVTLA 196

Query: 125 NGVNHLKADGIDFSSFH--QNAGGHANPSPISKFHVLCDGNIDGRDQNAAACNSSISGSK 182
           NGV  LK + +D +S H  QN     N S  S FHVL  G + G D +    NS +    
Sbjct: 197 NGVKGLKTESLDLASLHLSQNEDSPINLSQSSNFHVLDSGAVKGGDLDGINNNSLVYVEN 256

Query: 183 EVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG 242
           E   K  +EPV +                       AL+SCSPFVQLLQ LRTR+IPK G
Sbjct: 257 ENTRKPCDEPVAA-----------------------ALLSCSPFVQLLQNLRTRNIPKVG 293

Query: 243 YPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRP 302
           +PTLTAF  FVS+FD PS  SS KK+ ++++ GRPFSP+MFE VLK FTPDVPN ISGRP
Sbjct: 294 FPTLTAFAQFVSEFDMPSS-SSLKKDTAIVETGRPFSPAMFEGVLKKFTPDVPNCISGRP 352

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           RQEDAQEFLSFIMDQMHDELLKL+G+    NGA ++LVS  E+DEWETVGPKNKSAVTRT
Sbjct: 353 RQEDAQEFLSFIMDQMHDELLKLEGQFACTNGAKSSLVSSTEDDEWETVGPKNKSAVTRT 412

Query: 363 QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
           QSF+PS LSDIFGGQL+SVVKA GNKASATVQPFLLLHLDIY EAV TIEDAL LFSA E
Sbjct: 413 QSFIPSELSDIFGGQLRSVVKATGNKASATVQPFLLLHLDIYPEAVRTIEDALHLFSALE 472

Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 482
           NLEGYR   TG AG+VTA+KSVKIQTLSKI+ILHLMRFSYGSQGSTKLHK V FPL+LVL
Sbjct: 473 NLEGYRAPVTGKAGIVTARKSVKIQTLSKIMILHLMRFSYGSQGSTKLHKPVHFPLELVL 532

Query: 483 GRDLLVTPSAEVLQF 497
           GR+LLV+PS E  ++
Sbjct: 533 GRELLVSPSTESRKY 547


>gi|356542965|ref|XP_003539934.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Glycine
           max]
          Length = 530

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 289/499 (57%), Positives = 351/499 (70%), Gaps = 42/499 (8%)

Query: 6   LFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESS--LVGT 63
           +FVFGSFTE+ETRS L  QS G         + EKP E  +LQFGSLN  T  S  L+ +
Sbjct: 1   MFVFGSFTEDETRSLLSKQSFG---------KKEKPVEKNQLQFGSLNSVTVESNNLLNS 51

Query: 64  TDEPNGKSVVDGPVVFQPSTLLKKDDKVKSVGASNDHDLGAVGCPKENGHIKNSTNGPAL 123
           +     K+  + P    PS       K   V ++ D+     G  KENG I N +     
Sbjct: 52  S-----KASYNAP----PS----DSRKCNGVKSAIDNSPEVSGTVKENGSITNISPRSTS 98

Query: 124 SNGVNHLKADGIDFSSFHQNAGGHANPSPISKFHVLCDGNIDGRD-QNAAACNSSISGSK 182
           +  VN ++   ++F +     G      P++KF  L   ++D  + ++    +++ SG  
Sbjct: 99  TISVNEVEEKNVNFFTLRCEDG------PLNKFTKL---SLDASEAESLKNVHTTGSGDD 149

Query: 183 EVPMKAINEPVKS--------VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR 234
             P     EP K+        VKD+LPRGLINSGNLCFLNAT+QAL+SCSPFV LLQ+LR
Sbjct: 150 SAPKLPDREPQKAPNGHAVMHVKDILPRGLINSGNLCFLNATMQALLSCSPFVHLLQQLR 209

Query: 235 TRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDV 294
           T ++PK GYPTLTAF  F++ FD PS    KK++    + GRPF P MFE VLKNFTPDV
Sbjct: 210 TCNLPKVGYPTLTAFAEFITQFDMPSITKLKKQDADTFESGRPFRPVMFEGVLKNFTPDV 269

Query: 295 PNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPK 354
           PNSISGRPRQEDAQEFLSF+MDQMHDELLKL+G+S+S+NG+ ++LVS  E+DEWETVGPK
Sbjct: 270 PNSISGRPRQEDAQEFLSFVMDQMHDELLKLEGQSSSLNGSKSSLVSSVEDDEWETVGPK 329

Query: 355 NKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDA 414
           NKSAVTRTQSFLPS LS IFGGQL+S+V+A+GN+ASATVQP+LLLHLDIY +AVHTIEDA
Sbjct: 330 NKSAVTRTQSFLPSELSGIFGGQLRSLVRAKGNRASATVQPYLLLHLDIYPDAVHTIEDA 389

Query: 415 LRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSV 474
           L LFSAPE LEGYRTS T  AGVVTA+KSV+I TL KI+ILHLMRF YGSQGSTKLHK V
Sbjct: 390 LHLFSAPETLEGYRTSLTAKAGVVTARKSVQIVTLPKIMILHLMRFGYGSQGSTKLHKPV 449

Query: 475 RFPLQLVLGRDLLVTPSAE 493
            FPL+LVLGRDLLV+PS E
Sbjct: 450 HFPLELVLGRDLLVSPSTE 468


>gi|356531617|ref|XP_003534373.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Glycine
           max]
          Length = 532

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 288/499 (57%), Positives = 352/499 (70%), Gaps = 40/499 (8%)

Query: 6   LFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESS--LVGT 63
           +F+FGSFTE+ET+S L  QSSG         + EKP E  +LQFGSLN  T  S  L+ +
Sbjct: 1   MFLFGSFTEDETQSLLSKQSSG---------KKEKPVEKNQLQFGSLNSVTVESNNLLNS 51

Query: 64  TDEPNGKSVVDGPVVFQPSTLLKKDDKVKSVGASNDHDLGAVGCPKENGHIKNSTNGPAL 123
           +  P+            P +  +K + VKSV   +D+     G  KENG I N +     
Sbjct: 52  SKSPDN----------SPPSDSQKCNGVKSV---SDNSPEVSGTIKENGSITNISPRSIT 98

Query: 124 SNGVNHLKADGIDFSSFHQNAGGHANPSPISKFHVLCDGNIDGRDQNAAACNSSI-SGSK 182
           ++ ++  + +  + +SF     G   PS  +KF  L   ++D  +  +      I +G  
Sbjct: 99  TSTISVNEVEEKNANSF--TLRGEDGPS--NKFTKL---SLDASEAESLKNLHKIGNGDD 151

Query: 183 EVPMKAINEPVKS--------VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR 234
             P  +  EP K+        VKD+LPRGLINSGNLCFLNAT+QAL+SCSPFV LLQ+LR
Sbjct: 152 SAPKLSDREPQKAPNGHAVMHVKDILPRGLINSGNLCFLNATMQALLSCSPFVHLLQQLR 211

Query: 235 TRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDV 294
           TR++PK GYPTLTAF  F++ FD PS    KK++    + GRPF P MFE VLKNFTPDV
Sbjct: 212 TRNLPKVGYPTLTAFAEFIAQFDMPSTTKVKKQDTDTFESGRPFRPVMFEVVLKNFTPDV 271

Query: 295 PNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPK 354
           PNSISGRPRQEDAQEFLSF+MDQMHDELLKL+G S+S+NG+ ++LVS  E+DEWETVGPK
Sbjct: 272 PNSISGRPRQEDAQEFLSFVMDQMHDELLKLEGHSSSLNGSKSSLVSSVEDDEWETVGPK 331

Query: 355 NKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDA 414
           NKSAVTRTQSFLPS LS IFGGQL+S+V+A+GN+ASATVQP+LLLHLDIY +AVHTIEDA
Sbjct: 332 NKSAVTRTQSFLPSDLSGIFGGQLRSLVRAKGNRASATVQPYLLLHLDIYPDAVHTIEDA 391

Query: 415 LRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSV 474
           L LFSAPE LEGYRTS T  AGVVTA+KSV+I TL KI+ILHLMRF YGSQGS KLHK V
Sbjct: 392 LHLFSAPETLEGYRTSLTAKAGVVTARKSVRIVTLPKIMILHLMRFGYGSQGSIKLHKPV 451

Query: 475 RFPLQLVLGRDLLVTPSAE 493
            FPL+LVLGR+LLV+PS E
Sbjct: 452 HFPLELVLGRELLVSPSTE 470


>gi|357450917|ref|XP_003595735.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
 gi|355484783|gb|AES65986.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
          Length = 532

 Score =  490 bits (1262), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 281/494 (56%), Positives = 336/494 (68%), Gaps = 25/494 (5%)

Query: 1   MSDSKLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESSL 60
           MS+ K+ +FGSFTE+ETRS         VKK  SS + EKP E  +LQFGSLN    S  
Sbjct: 1   MSNPKVLLFGSFTEDETRSL-------RVKK--SSAKNEKPVEKNQLQFGSLN----SVT 47

Query: 61  VGTTDEPNGKSVVDGPVVFQPSTLLKKDDKVKSVGASNDHDLGAVGCPKENGHIKNSTNG 120
           V +++ PN     +       S  L    K K V     +        KENG I N + G
Sbjct: 48  VESSNLPNSPKATN-------SAPLHDSQKFKGVNGVRVNLPQVTETIKENGGITNFSIG 100

Query: 121 PALSNGVNHLKADGIDFSSFHQNAGGHANPSPISKFHVLCDGNIDGRDQNAAACNSSISG 180
           P+     N +K + I  S       G AN             ++    +N +  +SS   
Sbjct: 101 PSSITSANEVK-EHIVCSVTPIVENGTANQFTNLSLDASEAESLKNVLKNGSGGDSSSKL 159

Query: 181 SKEVPMKAIN-EPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP 239
            ++   KA N   V  VKDL PRGLINSGNLCFL+AT+QAL++CSPFVQLLQELRTR IP
Sbjct: 160 FEQNLKKAPNGHAVMHVKDLQPRGLINSGNLCFLSATVQALLACSPFVQLLQELRTRTIP 219

Query: 240 KAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS 299
           K GYPTL AF  FV+ FD PSG + KKK+    + GR F P MFE VLKNFTPDVPNSIS
Sbjct: 220 KVGYPTLKAFAEFVTQFDMPSGVNLKKKDTDSFEFGRAFCPVMFEDVLKNFTPDVPNSIS 279

Query: 300 GRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAV 359
           GRPRQEDAQEFLSF+MDQMHDELLKL+G+S+S+NG+ + LVS  E+DEWETVGPKNKSAV
Sbjct: 280 GRPRQEDAQEFLSFVMDQMHDELLKLEGQSSSLNGSKSFLVSSVEDDEWETVGPKNKSAV 339

Query: 360 TRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
           TRTQSF+PS L+ IFGGQL+S+V  +GN+ SAT QP+ L+HLDI+ +AVHTIEDAL LFS
Sbjct: 340 TRTQSFIPSELNGIFGGQLQSLVITKGNR-SATNQPYRLIHLDIHPDAVHTIEDALHLFS 398

Query: 420 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
           APE LEGYR S +G AG  TAKKS+KI+TL K++ILHLMRF YGSQGSTKL K V FPL+
Sbjct: 399 APETLEGYRASVSGKAG--TAKKSIKIKTLPKVMILHLMRFGYGSQGSTKLLKPVHFPLE 456

Query: 480 LVLGRDLLVTPSAE 493
           LVLGRDLLV+PS E
Sbjct: 457 LVLGRDLLVSPSTE 470


>gi|449507688|ref|XP_004163102.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Cucumis
           sativus]
          Length = 542

 Score =  486 bits (1252), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 273/503 (54%), Positives = 339/503 (67%), Gaps = 33/503 (6%)

Query: 1   MSDSKLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESSL 60
           MSDSK+ +FGSFTE+ET SW+  + + S  + V+         +  +QFGSLNF    SL
Sbjct: 1   MSDSKVLLFGSFTEDETNSWMPPKLNVSPGRLVN---------NVNVQFGSLNFTDGKSL 51

Query: 61  VGTTDE----PNGKSVVDGPVVFQPSTLLKKDDKVKSVGASNDHDLGAVGCPKENGHIKN 116
             + D     P+G S   G + F  + L + D +++ V  S  H       PKENG   N
Sbjct: 52  GSSADSELKGPSGSST--GSITFGSTDLARDDTELEIVQRSESHSPLESEVPKENGSNYN 109

Query: 117 STNGPALSNGVNHLKADGIDFSSFHQNAGGHANPSPISKFHVLC------DGNIDGRDQN 170
           S    + SNGV+  K D ID SS   + G H N   +++F  L       +G+ID   +N
Sbjct: 110 SNKSFSCSNGVSTTKIDDIDASSLCVSNGHHNNS--LNQFSRLIAEDIKENGSIDHLPEN 167

Query: 171 AAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLL 230
                      KE   +A N  V S   LLPRGLINSGNLCFLN+TLQAL+SC PFV LL
Sbjct: 168 VL---------KENFRRASNVSVTSSTTLLPRGLINSGNLCFLNSTLQALLSCPPFVDLL 218

Query: 231 QELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNF 290
           + L+ R+IPK GY TLTAFV F+S  + PS  +   ++++  D+G+PFSP MF+ VLKNF
Sbjct: 219 RNLQNREIPKVGYSTLTAFVEFISALEVPSS-TVLNRDVAASDVGKPFSPLMFDGVLKNF 277

Query: 291 TPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWET 350
           +PD+P+ I GRPRQEDAQEFLSF+MD+MH ELLKL G+S+S NG  + +V+ AE+DEWET
Sbjct: 278 SPDLPSGILGRPRQEDAQEFLSFVMDRMHAELLKLDGKSSSTNGGKSFVVASAEDDEWET 337

Query: 351 VGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHT 410
           VG KN++AV RTQSF+PS LS+IFGGQL S+VKA+GNK SAT+QPFL LHLDI  +AV T
Sbjct: 338 VGRKNRTAVMRTQSFVPSELSEIFGGQLTSMVKAKGNKPSATLQPFLSLHLDICPDAVRT 397

Query: 411 IEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKL 470
           IEDALRLFSAPE LEGYR SS G AGVV A KSVKIQ  SKI+ILHL RF YGS GSTKL
Sbjct: 398 IEDALRLFSAPETLEGYRPSSAGKAGVVAASKSVKIQKQSKIMILHLKRFGYGSHGSTKL 457

Query: 471 HKSVRFPLQLVLGRDLLVTPSAE 493
           +K V FPL+LVL RDLLV+ S E
Sbjct: 458 NKPVHFPLELVLNRDLLVSSSTE 480


>gi|297798878|ref|XP_002867323.1| ubiquitin-specific protease 24 [Arabidopsis lyrata subsp. lyrata]
 gi|297313159|gb|EFH43582.1| ubiquitin-specific protease 24 [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 279/510 (54%), Positives = 345/510 (67%), Gaps = 31/510 (6%)

Query: 1   MSDSKLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESSL 60
           MS+ KLFVFGSFTE ETRS+L+       +KP    +  K      +QFGSLN   E+S 
Sbjct: 1   MSEKKLFVFGSFTEHETRSFLE-------QKPTKDPQNHKDKCVGSIQFGSLNLVAENSS 53

Query: 61  VGTTDEPNGKSVVDGPVVFQPSTLLKKDDKVKSVGASNDHDL-----GAVGCPK---ENG 112
           V T  E   K   DG V    S       +  S    +D+D       +   P+   ENG
Sbjct: 54  VNTNGELK-KGQADGTVKSAGSQERLDASRPDSSNKIDDNDAKLPRKSSSRVPEHVVENG 112

Query: 113 HIKNSTNGPALSNGVNHLKADGIDFSSFHQNAGGHANP---SPISKFHVLCDGNIDGRDQ 169
            IK  +   +L+NGV  +K D I        + G ++P   +  SKF  L     D  D 
Sbjct: 113 IIKEISESKSLNNGVA-VKTDPIGLDKLCM-SDGESDPVYKASSSKFQAL-----DNEDF 165

Query: 170 NAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQL 229
           ++ + + SI   K    K   E V  VKD  PRGLIN+GNLCFLNATLQAL+SCSPFVQL
Sbjct: 166 SSDSSSGSIQRKKN--QKVPTESVPPVKDFTPRGLINAGNLCFLNATLQALLSCSPFVQL 223

Query: 230 LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKN 289
           LQ ++ +DIPKA  PTL AF  F+S+ D PS  SS + N++V++ GRPF P+MFE VL+N
Sbjct: 224 LQRIQLQDIPKADSPTLAAFSEFISELDVPSS-SSIRNNVTVVEAGRPFRPAMFEGVLRN 282

Query: 290 FTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLA--EEDE 347
           FTPDV N++SGRPRQEDAQEFLSFIMDQMHDELLKL+ +S  +  + ++++S A  ++DE
Sbjct: 283 FTPDVLNNMSGRPRQEDAQEFLSFIMDQMHDELLKLKEQSPKVTASKSSVISSANDDDDE 342

Query: 348 WETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEA 407
           WETVGPKNKSAVTRTQSF+PS LS+IFGGQLKSVVKA+G KASATVQP+LLLHLDI+ + 
Sbjct: 343 WETVGPKNKSAVTRTQSFVPSELSEIFGGQLKSVVKAKGTKASATVQPYLLLHLDIHPDG 402

Query: 408 VHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS 467
           V  IEDAL LFSA E+LEGYR S TG  GVV+A KS+KIQ LSKI+ILHLMRFSYGSQGS
Sbjct: 403 VKGIEDALHLFSAQEDLEGYRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQGS 462

Query: 468 TKLHKSVRFPLQLVLGRDLLVTPSAEVLQF 497
           TKLHK V+FPL+L L R+ LV+ S E L++
Sbjct: 463 TKLHKGVKFPLELNLNRNHLVSLSNESLRY 492


>gi|18417689|ref|NP_567860.1| ubiquitin carboxyl-terminal hydrolase 24 [Arabidopsis thaliana]
 gi|42573095|ref|NP_974644.1| ubiquitin carboxyl-terminal hydrolase 24 [Arabidopsis thaliana]
 gi|334187041|ref|NP_001190875.1| ubiquitin carboxyl-terminal hydrolase 24 [Arabidopsis thaliana]
 gi|75262799|sp|Q9FPS3.1|UBP24_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 24; AltName:
           Full=Deubiquitinating enzyme 24; Short=AtUBP24; AltName:
           Full=Ubiquitin thioesterase 24; AltName:
           Full=Ubiquitin-specific-processing protease 24
 gi|11993488|gb|AAG42762.1|AF302672_1 ubiquitin-specific protease 24 [Arabidopsis thaliana]
 gi|332660424|gb|AEE85824.1| ubiquitin carboxyl-terminal hydrolase 24 [Arabidopsis thaliana]
 gi|332660425|gb|AEE85825.1| ubiquitin carboxyl-terminal hydrolase 24 [Arabidopsis thaliana]
 gi|332660426|gb|AEE85826.1| ubiquitin carboxyl-terminal hydrolase 24 [Arabidopsis thaliana]
          Length = 551

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 277/511 (54%), Positives = 346/511 (67%), Gaps = 32/511 (6%)

Query: 1   MSDSKLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESSL 60
           MS+ K+FVFGSFTE ETRS+ +       +KP    +  K      +QFGSLN   E+S 
Sbjct: 1   MSEKKVFVFGSFTEHETRSFFE-------QKPTKDPQNSKDKCVGSIQFGSLNLAAENSS 53

Query: 61  VGTTDEPNGKSVVDGPVVFQPSTLLKKDDKVKSVGASNDHDL-----GAVGCPK---ENG 112
           V T  E   K   DG V    S       +  S   +ND D       ++  P+   +NG
Sbjct: 54  VNTNGELK-KGEADGTVKSAGSQERLDASRPASSDKNNDSDAKLPRKNSLRVPEHVVQNG 112

Query: 113 HIKN-STNGPALSNGVNHLKADGIDFSSFHQNAGGHANP---SPISKFHVLCDGNIDGRD 168
            IK  S +  +L+NGV  +K D I   +    + G ++P   +  SKF  L     D  D
Sbjct: 113 IIKEISESNKSLNNGV-AVKTDPIGLDNLSM-SDGESDPVYKASSSKFQAL-----DNED 165

Query: 169 QNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ 228
            ++ + + SI   K   +K   E V  VKD  PRGLIN+GNLCFLNATLQAL+SCSPFVQ
Sbjct: 166 FSSDSSSGSIQRKKN--LKVPTESVPPVKDFTPRGLINAGNLCFLNATLQALLSCSPFVQ 223

Query: 229 LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLK 288
           LLQ+++ +DIPKA  PTL AF  F+S+ D PS  SS + N++V++ GRPF P+MFE VL+
Sbjct: 224 LLQKIQLQDIPKADSPTLAAFSEFISELDVPSS-SSIRNNVTVVEAGRPFRPAMFEGVLR 282

Query: 289 NFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEED-- 346
           NFTPDV N++SGRPRQEDAQEFLSFIMDQMHDELLKL+ +S  +  + ++++S A +D  
Sbjct: 283 NFTPDVLNNMSGRPRQEDAQEFLSFIMDQMHDELLKLKEQSPKVTASKSSVISSANDDGD 342

Query: 347 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSE 406
           EWETVGPKNKSAVTRTQSF+PS LS+IFGGQLKSVVKA+G KASATVQP+LLLHLDI+ +
Sbjct: 343 EWETVGPKNKSAVTRTQSFVPSELSEIFGGQLKSVVKAKGTKASATVQPYLLLHLDIHPD 402

Query: 407 AVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG 466
            V  IEDAL LFSA E+LEGYR S TG  GVV+A KS+KIQ LSKI+ILHLMRFSYGSQG
Sbjct: 403 GVQGIEDALHLFSAQEDLEGYRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQG 462

Query: 467 STKLHKSVRFPLQLVLGRDLLVTPSAEVLQF 497
           STKL K V+FPL+L L R  LV+ S E L++
Sbjct: 463 STKLRKGVKFPLELNLNRSHLVSLSNESLRY 493


>gi|222423693|dbj|BAH19813.1| AT4G30890 [Arabidopsis thaliana]
          Length = 551

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 277/511 (54%), Positives = 346/511 (67%), Gaps = 32/511 (6%)

Query: 1   MSDSKLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESSL 60
           MS+ K+FVFGSFTE ETRS+ +       +KP    +  K      +QFGSLN   E+S 
Sbjct: 1   MSEKKVFVFGSFTEHETRSFFE-------QKPTKDPQDSKDKCVGSIQFGSLNLAAENSS 53

Query: 61  VGTTDEPNGKSVVDGPVVFQPSTLLKKDDKVKSVGASNDHDL-----GAVGCPK---ENG 112
           V T  E   K   DG V    S       +  S   +ND D       ++  P+   +NG
Sbjct: 54  VNTNGELK-KGEADGTVKSAGSQERLDASRPASSDKNNDSDAKLPRKNSLRVPEHVVQNG 112

Query: 113 HIKN-STNGPALSNGVNHLKADGIDFSSFHQNAGGHANP---SPISKFHVLCDGNIDGRD 168
            IK  S +  +L+NGV  +K D I   +    + G ++P   +  SKF  L     D  D
Sbjct: 113 IIKEISESNKSLNNGV-AVKTDPIGLDNLSM-SDGESDPVYKASSSKFQAL-----DNED 165

Query: 169 QNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ 228
            ++ + + SI   K   +K   E V  VKD  PRGLIN+GNLCFLNATLQAL+SCSPFVQ
Sbjct: 166 FSSDSSSGSIQRKKN--LKVPTESVPPVKDFTPRGLINAGNLCFLNATLQALLSCSPFVQ 223

Query: 229 LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLK 288
           LLQ+++ +DIPKA  PTL AF  F+S+ D PS  SS + N++V++ GRPF P+MFE VL+
Sbjct: 224 LLQKIQLQDIPKADSPTLAAFSEFISELDVPSS-SSIRNNVTVVEAGRPFRPAMFEGVLR 282

Query: 289 NFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEED-- 346
           NFTPDV N++SGRPRQEDAQEFLSFIMDQMHDELLKL+ +S  +  + ++++S A +D  
Sbjct: 283 NFTPDVLNNMSGRPRQEDAQEFLSFIMDQMHDELLKLKEQSPKVTASKSSVISSANDDGD 342

Query: 347 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSE 406
           EWETVGPKNKSAVTRTQSF+PS LS+IFGGQLKSVVKA+G KASATVQP+LLLHLDI+ +
Sbjct: 343 EWETVGPKNKSAVTRTQSFVPSELSEIFGGQLKSVVKAKGTKASATVQPYLLLHLDIHPD 402

Query: 407 AVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG 466
            V  IEDAL LFSA E+LEGYR S TG  GVV+A KS+KIQ LSKI+ILHLMRFSYGSQG
Sbjct: 403 GVQGIEDALHLFSAQEDLEGYRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQG 462

Query: 467 STKLHKSVRFPLQLVLGRDLLVTPSAEVLQF 497
           STKL K V+FPL+L L R  LV+ S E L++
Sbjct: 463 STKLRKGVKFPLELNLNRSHLVSLSNESLRY 493


>gi|449451721|ref|XP_004143610.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Cucumis
           sativus]
          Length = 522

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 255/457 (55%), Positives = 312/457 (68%), Gaps = 24/457 (5%)

Query: 47  LQFGSLNFGTESSLVGTTDE----PNGKSVVDGPVVFQPSTLLKKDDKVKSVGASNDHDL 102
           +QFGSLNF    SL  + D     P+G S   G + F  + L + D +++ V  S  H  
Sbjct: 18  VQFGSLNFTDGKSLGSSADSELKGPSGSST--GSITFGSTDLARDDTELEIVQRSESHSP 75

Query: 103 GAVGCPKENGHIKNSTNGPALSNGVNHLKADGIDFSSFHQNAGGHANPSPISKFHVLC-- 160
                PKENG   NS    + SNGV+  K D ID SS   + G H N   +++F  L   
Sbjct: 76  LESEVPKENGSNYNSNKSFSCSNGVSTTKIDDIDASSLCVSNGHHNNS--LNQFSRLIAE 133

Query: 161 ----DGNIDGRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNAT 216
               +G+ID   +N           KE   +A N  V S   LLPRGLINSGNLCFLN+T
Sbjct: 134 DIKENGSIDHLPENVL---------KENFRRASNVSVTSSTTLLPRGLINSGNLCFLNST 184

Query: 217 LQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGR 276
           LQAL+SC PFV LL+ L+ R+IPK GY TLTAFV F+S  + PS  +   ++++  D+G+
Sbjct: 185 LQALLSCPPFVDLLRNLQNREIPKVGYSTLTAFVEFISALEVPSS-TVLNRDVAASDVGK 243

Query: 277 PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGAN 336
           PF P MF+ VLKNF+PD+P+ I GRPRQEDAQEFLSF+MD+MH ELLKL G+S+S NG  
Sbjct: 244 PFIPLMFDGVLKNFSPDLPSGILGRPRQEDAQEFLSFVMDRMHAELLKLDGKSSSTNGGK 303

Query: 337 TALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPF 396
           + +V+ AE+DEWETVG KN++AV RTQSF+PS LS+IFGGQL S+VKA+GNK SAT+QPF
Sbjct: 304 SFVVASAEDDEWETVGRKNRTAVMRTQSFVPSELSEIFGGQLTSMVKAKGNKPSATLQPF 363

Query: 397 LLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILH 456
           L LHLDI  +AV TIEDALRLFSAPE LEGYR SS G AGVV A KSVKIQ  SKI+ILH
Sbjct: 364 LSLHLDICPDAVRTIEDALRLFSAPETLEGYRPSSAGKAGVVAASKSVKIQKQSKIMILH 423

Query: 457 LMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 493
           L RF YGS GSTKL+K V FPL+LVL RDLLV+ S E
Sbjct: 424 LKRFGYGSHGSTKLNKPVHFPLELVLNRDLLVSSSTE 460


>gi|34395185|dbj|BAC83574.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
          Length = 669

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 253/520 (48%), Positives = 328/520 (63%), Gaps = 60/520 (11%)

Query: 3   DSKLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESSLVG 62
           D ++ +FGSFTE ET+ W          +P     A K  E  E+QFGSLNF    S + 
Sbjct: 122 DDQILLFGSFTEAETKLW----------QP----NANKTRELSEIQFGSLNF----SALN 163

Query: 63  TTDEPNGKSVVDGPVVFQPSTLLKKDDKV---KSVGASNDHDLGAVGCPKE-----NGH- 113
            + E N  S+  G V   P+ L    +K+   K +  SN  +  A   P       NG  
Sbjct: 164 LSKESN--SITQGAVY--PAKLSDGQNKIIITKDIACSNKKETVAPTLPNGKPVLFNGSP 219

Query: 114 IKNSTNGPALSNGV--NHLKADGIDFSSFHQNAGGHANPSPISKFHVLCDGNIDGRDQNA 171
             N+   P  +NGV  N+ KA     +S    A   ++P+P+S   V  DG I+ R+QN+
Sbjct: 220 TANANVSP--NNGVIENNQKAVAAVLTSVP--AKNVSSPAPLSVPEVDHDG-IE-RNQNS 273

Query: 172 AACNSSISG---SKEVPMKA--INEPVKSV-------KDLLPRGLINSGNLCFLNATLQA 219
           +           + + P  A  ++E V S+       K LLP GL N+GN+CFLN++LQA
Sbjct: 274 SLVPEITENGGPAIDTPTTAAPVDELVTSLNKKDFRNKPLLPHGLKNTGNICFLNSSLQA 333

Query: 220 LMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFS 279
           L+SC PFVQLLQ LR ++IPKAGYPTL AF+ F+S FD     + KK         +   
Sbjct: 334 LLSCWPFVQLLQNLRNQNIPKAGYPTLNAFIEFISQFDVLDDSNVKKDEKFATIASKSVI 393

Query: 280 PSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANT-- 337
           PSMF+ VL+NFTPDVP   + RPRQEDAQEFLSF MD+MHDEL+KL G     NG+N+  
Sbjct: 394 PSMFDTVLRNFTPDVPAGTASRPRQEDAQEFLSFAMDRMHDELVKLNG-----NGSNSKE 448

Query: 338 -ALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPF 396
             +VS  ++D WETVG KNKSA+ R+QSF+PS L+ IFGGQL+S VKA GNKAS TVQPF
Sbjct: 449 GMIVSSNDDDAWETVGKKNKSAIMRSQSFVPSELTAIFGGQLQSCVKATGNKASVTVQPF 508

Query: 397 LLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILH 456
            L+HLDI+ +AV  ++DALRLF+APE+LEGYRT++ G AG+VTA+KSVKI +LSKI+ILH
Sbjct: 509 RLIHLDIFPDAVQKLDDALRLFAAPESLEGYRTAA-GKAGLVTARKSVKIHSLSKIMILH 567

Query: 457 LMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           L RFSYGS G TKL K + FPL+LVL RDLL +PS+E +Q
Sbjct: 568 LKRFSYGSHGCTKLFKPIHFPLELVLSRDLLSSPSSEHMQ 607


>gi|218200195|gb|EEC82622.1| hypothetical protein OsI_27205 [Oryza sativa Indica Group]
          Length = 737

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 253/520 (48%), Positives = 328/520 (63%), Gaps = 60/520 (11%)

Query: 3   DSKLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESSLVG 62
           D ++ +FGSFTE ET+ W          +P     A K  E  E+QFGSLNF    S + 
Sbjct: 122 DDQILLFGSFTEAETKLW----------QP----NANKTRELSEIQFGSLNF----SALN 163

Query: 63  TTDEPNGKSVVDGPVVFQPSTLLKKDDKV---KSVGASNDHDLGAVGCPKE-----NGH- 113
            + E N  S+  G V   P+ L    +K+   K +  SN  +  A   P       NG  
Sbjct: 164 LSKESN--SITQGAVY--PAKLSDGQNKIIITKDIACSNKKETVAPTLPNGKPVLFNGSP 219

Query: 114 IKNSTNGPALSNGV--NHLKADGIDFSSFHQNAGGHANPSPISKFHVLCDGNIDGRDQNA 171
             N+   P  +NGV  N+ KA     +S    A   ++P+P+S   V  DG I+ R+QN+
Sbjct: 220 TANANVSP--NNGVIENNQKAVAAVLTSVP--AKNVSSPAPLSVPEVDHDG-IE-RNQNS 273

Query: 172 AACNSSISG---SKEVPMKA--INEPVKSV-------KDLLPRGLINSGNLCFLNATLQA 219
           +           + + P  A  ++E V S+       K LLP GL N+GN+CFLN++LQA
Sbjct: 274 SLVPEITENGGPAIDTPTTAAPVDELVTSLNKKDFRNKPLLPHGLKNTGNICFLNSSLQA 333

Query: 220 LMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFS 279
           L+SC PFVQLLQ LR ++IPKAGYPTL AF+ F+S FD     + KK         +   
Sbjct: 334 LLSCWPFVQLLQNLRNQNIPKAGYPTLNAFIEFISQFDVLDDSNVKKDEKFATIASKSVI 393

Query: 280 PSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANT-- 337
           PSMF+ VL+NFTPDVP   + RPRQEDAQEFLSF MD+MHDEL+KL G     NG+N+  
Sbjct: 394 PSMFDTVLRNFTPDVPAGTASRPRQEDAQEFLSFAMDRMHDELVKLNG-----NGSNSKE 448

Query: 338 -ALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPF 396
             +VS  ++D WETVG KNKSA+ R+QSF+PS L+ IFGGQL+S VKA GNKAS TVQPF
Sbjct: 449 GMIVSSNDDDAWETVGKKNKSAIMRSQSFVPSELTAIFGGQLQSCVKATGNKASVTVQPF 508

Query: 397 LLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILH 456
            L+HLDI+ +AV  ++DALRLF+APE+LEGYRT++ G AG+VTA+KSVKI +LSKI+ILH
Sbjct: 509 RLIHLDIFPDAVQKLDDALRLFAAPESLEGYRTAA-GKAGLVTARKSVKIHSLSKIMILH 567

Query: 457 LMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           L RFSYGS G TKL K + FPL+LVL RDLL +PS+E +Q
Sbjct: 568 LKRFSYGSHGCTKLFKPIHFPLELVLSRDLLSSPSSEHMQ 607


>gi|222637619|gb|EEE67751.1| hypothetical protein OsJ_25454 [Oryza sativa Japonica Group]
          Length = 738

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 252/520 (48%), Positives = 328/520 (63%), Gaps = 60/520 (11%)

Query: 3   DSKLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESSLVG 62
           + ++ +FGSFTE ET+ W          +P     A K  E  E+QFGSLNF    S + 
Sbjct: 123 NDRILLFGSFTEAETKLW----------QP----NANKTRELSEIQFGSLNF----SALN 164

Query: 63  TTDEPNGKSVVDGPVVFQPSTLLKKDDKV---KSVGASNDHDLGAVGCPKE-----NGH- 113
            + E N  S+  G V   P+ L    +K+   K +  SN  +  A   P       NG  
Sbjct: 165 LSKESN--SITQGAVY--PAKLSDGQNKIIITKDIACSNKKETVAPTLPNGKPVLFNGSP 220

Query: 114 IKNSTNGPALSNGV--NHLKADGIDFSSFHQNAGGHANPSPISKFHVLCDGNIDGRDQNA 171
             N+   P  +NGV  N+ KA     +S    A   ++P+P+S   V  DG I+ R+QN+
Sbjct: 221 TANANVSP--NNGVIENNQKAVAAVLTSVP--AKNVSSPAPLSVPEVDHDG-IE-RNQNS 274

Query: 172 AACNSSISG---SKEVPMKA--INEPVKSV-------KDLLPRGLINSGNLCFLNATLQA 219
           +           + + P  A  ++E V S+       K LLP GL N+GN+CFLN++LQA
Sbjct: 275 SLVPEITENGGPAIDTPTTAAPVDELVTSLNKKDFRNKPLLPHGLKNTGNICFLNSSLQA 334

Query: 220 LMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFS 279
           L+SC PFVQLLQ LR ++IPKAGYPTL AF+ F+S FD     + KK         +   
Sbjct: 335 LLSCWPFVQLLQNLRNQNIPKAGYPTLNAFIEFISQFDVLDDSNVKKDEKFATIASKSVI 394

Query: 280 PSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANT-- 337
           PSMF+ VL+NFTPDVP   + RPRQEDAQEFLSF MD+MHDEL+KL G     NG+N+  
Sbjct: 395 PSMFDTVLRNFTPDVPAGTASRPRQEDAQEFLSFAMDRMHDELVKLNG-----NGSNSKE 449

Query: 338 -ALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPF 396
             +VS  ++D WETVG KNKSA+ R+QSF+PS L+ IFGGQL+S VKA GNKAS TVQPF
Sbjct: 450 GMIVSSNDDDAWETVGKKNKSAIMRSQSFVPSELTAIFGGQLQSCVKATGNKASVTVQPF 509

Query: 397 LLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILH 456
            L+HLDI+ +AV  ++DALRLF+APE+LEGYRT++ G AG+VTA+KSVKI +LSKI+ILH
Sbjct: 510 RLIHLDIFPDAVQKLDDALRLFAAPESLEGYRTAA-GKAGLVTARKSVKIHSLSKIMILH 568

Query: 457 LMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           L RFSYGS G TKL K + FPL+LVL RDLL +PS+E +Q
Sbjct: 569 LKRFSYGSHGCTKLFKPIHFPLELVLSRDLLSSPSSEHMQ 608


>gi|293334949|ref|NP_001170649.1| uncharacterized protein LOC100384703 [Zea mays]
 gi|238006636|gb|ACR34353.1| unknown [Zea mays]
 gi|414591099|tpg|DAA41670.1| TPA: ubiquitin carboxyl-terminal hydrolase [Zea mays]
          Length = 552

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 242/514 (47%), Positives = 311/514 (60%), Gaps = 54/514 (10%)

Query: 5   KLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFG-------TE 57
           K+ +FGSFTE+ET+   Q Q   S  K VS     K  E  E+QFG+LNF        + 
Sbjct: 6   KMLLFGSFTEDETK-LFQGQPLKSPNKSVS-----KECERTEIQFGTLNFSVLSLEKVST 59

Query: 58  SSLVGTTDEPNGKSVVDGPVVFQPSTLLKKD---DKVKSVGAS--NDHDLGAVGCPKENG 112
           SS+V      N ++          S + K++   ++ K+ G+S  N   + A GCP  N 
Sbjct: 60  SSVVLPAKSANSET----------SAITKENTCSNEKKAAGSSLPNGRAILANGCPPVNV 109

Query: 113 HIKNSTNGPALSNGVNHLKADGIDFSSFHQNAGGHANPSPISKFHVLCDGN-------ID 165
              N      L   V   +A               +NP+P     V  DG        +D
Sbjct: 110 PANND-----LFENVKKTEAV----VPPVVPVKSISNPTPQMTLEVHNDGTEPTQSRKLD 160

Query: 166 GRDQNAAACNSSISGSKEVP------MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQA 219
            +++      S I  +          +  +N+       L+P+GL N+GN+CFLNATLQA
Sbjct: 161 -KEREITENGSPIVDTPIAAAPAEEAVTNLNKKTSQNMPLIPQGLRNTGNICFLNATLQA 219

Query: 220 LMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFS 279
           L+SCSPFV LLQ+LR R IPK GYPTL AFV  +S FD      +KKK  +     +P +
Sbjct: 220 LLSCSPFVHLLQDLRNRSIPKFGYPTLRAFVELISQFDVLDESVNKKKEKATTVAAKPLN 279

Query: 280 PSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTAL 339
           P+MF+ VL+NFTPDVP  I+ RPRQEDAQEFLSF MD++HDELLKL G    ++     +
Sbjct: 280 PAMFDDVLRNFTPDVPAGITARPRQEDAQEFLSFAMDRVHDELLKLNG--NGLDSKEGMV 337

Query: 340 VSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLL 399
           VS + +D WETVG KNKSA+ RT SF+PS LS IFGGQL+SVVKA GNKASATVQPFLLL
Sbjct: 338 VSSSADDAWETVGRKNKSAIVRTHSFVPSELSAIFGGQLQSVVKAAGNKASATVQPFLLL 397

Query: 400 HLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMR 459
           HLDI+ +AV T+ DALRLFS PE+LEGYRT++ G AG+VTA+KS KI  L KI+ILHL R
Sbjct: 398 HLDIFPDAVQTLNDALRLFSTPESLEGYRTTA-GKAGLVTARKSFKIHALPKIMILHLKR 456

Query: 460 FSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 493
           FSYG+ GSTK++K + F  +LVL RDLL +PS E
Sbjct: 457 FSYGNNGSTKIYKPLGFTSELVLSRDLLSSPSQE 490


>gi|326520702|dbj|BAJ92714.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 739

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 192/301 (63%), Positives = 235/301 (78%), Gaps = 3/301 (0%)

Query: 197 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF 256
           K LLP GL N+GN+CFLNATLQA +SC PFVQL+Q+L+ R+IPKAGYPTL+AF+  VS F
Sbjct: 384 KPLLPHGLKNTGNICFLNATLQAFLSCFPFVQLVQDLKNRNIPKAGYPTLSAFIELVSQF 443

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
           D     + KK     L   +  +P+MF+ VL+NFTPDVP   S RPRQEDAQEFLSF MD
Sbjct: 444 DVLDESTMKKDERFALVAAKVINPTMFDQVLRNFTPDVPAGTSARPRQEDAQEFLSFAMD 503

Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
           +MHDELL+L G    +N     +VS  ++D WETVG KNKSA+ RTQSF+PS LS IFGG
Sbjct: 504 RMHDELLRLNG--NGLNSKEGMVVSSDDDDAWETVGRKNKSAIMRTQSFVPSDLSAIFGG 561

Query: 377 QLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 436
           +L+SVVKA GNKASATVQPFLLLHLDI+ +AV T++DAL LFS PE+LEGYRT++ G AG
Sbjct: 562 KLQSVVKAAGNKASATVQPFLLLHLDIFPDAVQTLDDALHLFSTPESLEGYRTTA-GKAG 620

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           VVTA+KS KI  LSKI+ILHL RFSYG++G TKL+K + FPL+LVL RDLL +PS+E  +
Sbjct: 621 VVTARKSFKIHELSKIMILHLKRFSYGNRGCTKLYKPLHFPLELVLNRDLLSSPSSEGRR 680

Query: 497 F 497
           +
Sbjct: 681 Y 681


>gi|115473875|ref|NP_001060536.1| Os07g0661300 [Oryza sativa Japonica Group]
 gi|113612072|dbj|BAF22450.1| Os07g0661300, partial [Oryza sativa Japonica Group]
          Length = 489

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 190/303 (62%), Positives = 234/303 (77%), Gaps = 9/303 (2%)

Query: 197 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF 256
           K LLP GL N+GN+CFLN++LQAL+SC PFVQLLQ LR ++IPKAGYPTL AF+ F+S F
Sbjct: 131 KPLLPHGLKNTGNICFLNSSLQALLSCWPFVQLLQNLRNQNIPKAGYPTLNAFIEFISQF 190

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
           D     + KK         +   PSMF+ VL+NFTPDVP   + RPRQEDAQEFLSF MD
Sbjct: 191 DVLDDSNVKKDEKFATIASKSVIPSMFDTVLRNFTPDVPAGTASRPRQEDAQEFLSFAMD 250

Query: 317 QMHDELLKLQGESTSINGANT---ALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 373
           +MHDEL+KL G     NG+N+    +VS  ++D WETVG KNKSA+ R+QSF+PS L+ I
Sbjct: 251 RMHDELVKLNG-----NGSNSKEGMIVSSNDDDAWETVGKKNKSAIMRSQSFVPSELTAI 305

Query: 374 FGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
           FGGQL+S VKA GNKAS TVQPF L+HLDI+ +AV  ++DALRLF+APE+LEGYRT++ G
Sbjct: 306 FGGQLQSCVKATGNKASVTVQPFRLIHLDIFPDAVQKLDDALRLFAAPESLEGYRTAA-G 364

Query: 434 NAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 493
            AG+VTA+KSVKI +LSKI+ILHL RFSYGS G TKL K + FPL+LVL RDLL +PS+E
Sbjct: 365 KAGLVTARKSVKIHSLSKIMILHLKRFSYGSHGCTKLFKPIHFPLELVLSRDLLSSPSSE 424

Query: 494 VLQ 496
            +Q
Sbjct: 425 HMQ 427


>gi|2980777|emb|CAA18204.1| putative protein [Arabidopsis thaliana]
 gi|7269990|emb|CAB79807.1| putative protein [Arabidopsis thaliana]
          Length = 463

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 233/466 (50%), Positives = 294/466 (63%), Gaps = 51/466 (10%)

Query: 1   MSDSKLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESSL 60
           MS+ K+FVFGSFTE ETRS+ +       +KP    +  K      +QFGSLN   E+S 
Sbjct: 1   MSEKKVFVFGSFTEHETRSFFE-------QKPTKDPQNSKDKCVGSIQFGSLNLAAENSS 53

Query: 61  VGTTDEPNGKSVVDGPVVFQPSTLLKKDDKVKSVGASNDHDL-----GAVGCPK---ENG 112
           V T  E   K   DG V    S       +  S   +ND D       ++  P+   +NG
Sbjct: 54  VNTNGELK-KGEADGTVKSAGSQERLDASRPASSDKNNDSDAKLPRKNSLRVPEHVVQNG 112

Query: 113 HIKN-STNGPALSNGVNHLKADGIDFSSFHQNAGGHANP---SPISKFHVLCDGNIDGRD 168
            IK  S +  +L+NGV  +K D I   +    + G ++P   +  SKF  L     D  D
Sbjct: 113 IIKEISESNKSLNNGV-AVKTDPIGLDNLSM-SDGESDPVYKASSSKFQAL-----DNED 165

Query: 169 QNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ 228
            ++ + + SI   K   +K   E V  VKD  PRGLIN+GNLCFLNATLQAL+SCSPFVQ
Sbjct: 166 FSSDSSSGSIQRKKN--LKVPTESVPPVKDFTPRGLINAGNLCFLNATLQALLSCSPFVQ 223

Query: 229 LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLK 288
           LLQ+++ +DIPKA  PTL AF  F+S+ D PS  SS + N++V++ GRPF P+MFE VL+
Sbjct: 224 LLQKIQLQDIPKADSPTLAAFSEFISELDVPSS-SSIRNNVTVVEAGRPFRPAMFEGVLR 282

Query: 289 NFTPDVPNSISGRPR-------------------QEDAQEFLSFIMDQMHDELLKLQGES 329
           NFTPDV N++SGRPR                    EDAQEFLSFIMDQMHDELLKL+ +S
Sbjct: 283 NFTPDVLNNMSGRPRLVTPLHSLNFDGSSVLNSSYEDAQEFLSFIMDQMHDELLKLKEQS 342

Query: 330 TSINGANTALVSLAEED--EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGN 387
             +  + ++++S A +D  EWETVGPKNKSAVTRTQSF+PS LS+IFGGQLKSVVKA+G 
Sbjct: 343 PKVTASKSSVISSANDDGDEWETVGPKNKSAVTRTQSFVPSELSEIFGGQLKSVVKAKGT 402

Query: 388 KASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
           KASATVQP+LLLHLDI+ + V  IEDAL LFSA E+LEGYR S TG
Sbjct: 403 KASATVQPYLLLHLDIHPDGVQGIEDALHLFSAQEDLEGYRASVTG 448


>gi|224072837|ref|XP_002303905.1| predicted protein [Populus trichocarpa]
 gi|222841337|gb|EEE78884.1| predicted protein [Populus trichocarpa]
          Length = 295

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 180/226 (79%), Positives = 201/226 (88%)

Query: 272 LDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTS 331
           ++ GRPF P+MFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM QMHDELLKL+G+S+ 
Sbjct: 12  VETGRPFRPAMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMHQMHDELLKLEGQSSG 71

Query: 332 INGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASA 391
            NG  T++VS  EEDEWETVGPKNKSAVTRTQSF+PS LSDIFGGQL+SVVKA+GNKASA
Sbjct: 72  TNGFKTSVVSSTEEDEWETVGPKNKSAVTRTQSFIPSELSDIFGGQLRSVVKARGNKASA 131

Query: 392 TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSK 451
           TVQPFLLLHLDI+ E V TIEDAL LFSAPENLEGYRTS+ G +GVVTAKKSVKIQTLSK
Sbjct: 132 TVQPFLLLHLDIHLEVVRTIEDALHLFSAPENLEGYRTSAIGKSGVVTAKKSVKIQTLSK 191

Query: 452 ILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQF 497
           I+ILHLMRFSYGSQGS KL K V FPL+ +L R+LLV+PS E  ++
Sbjct: 192 IMILHLMRFSYGSQGSAKLLKPVHFPLEFILSRELLVSPSTESRKY 237


>gi|147817822|emb|CAN75583.1| hypothetical protein VITISV_036537 [Vitis vinifera]
          Length = 275

 Score =  348 bits (894), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 170/213 (79%), Positives = 191/213 (89%), Gaps = 1/213 (0%)

Query: 282 MFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVS 341
           MFE VLKNFTPDVPN ISGRPRQEDAQEFLSF+MDQMHDELLKL+G  +++NG  ++LVS
Sbjct: 1   MFEGVLKNFTPDVPNKISGRPRQEDAQEFLSFVMDQMHDELLKLEGFFSNLNGGKSSLVS 60

Query: 342 LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHL 401
            AE+DEWETVGPKNKSAVTRTQSF+PS LS IFGGQL+SVVKA+GNKASATVQPFLLLHL
Sbjct: 61  SAEDDEWETVGPKNKSAVTRTQSFVPSELSKIFGGQLRSVVKARGNKASATVQPFLLLHL 120

Query: 402 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 461
           DI  EA++TIEDALRLFSAPE LEGYRTS TG AG+VTA KSVKIQ LS+I+ILHLMRF 
Sbjct: 121 DILPEAIYTIEDALRLFSAPETLEGYRTSGTGKAGLVTASKSVKIQKLSEIMILHLMRFY 180

Query: 462 YG-SQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 493
           Y  +QGSTKLHK V FPL+LVLGR+LLV+P+ E
Sbjct: 181 YDENQGSTKLHKPVTFPLELVLGRELLVSPTTE 213


>gi|22022542|gb|AAM83229.1| AT4g30890/F6I18_200 [Arabidopsis thaliana]
 gi|23308335|gb|AAN18137.1| At4g30890/F6I18_200 [Arabidopsis thaliana]
          Length = 276

 Score =  315 bits (808), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 156/218 (71%), Positives = 183/218 (83%), Gaps = 2/218 (0%)

Query: 282 MFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVS 341
           MFE VL+NFTPDV N++SGRPRQEDAQEFLSFIMDQMHDELLKL+ +S  +  + ++++S
Sbjct: 1   MFEGVLRNFTPDVLNNMSGRPRQEDAQEFLSFIMDQMHDELLKLKEQSPKVTASKSSVIS 60

Query: 342 LAEED--EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLL 399
            A +D  EWETVGPKNKSAVTRTQSF+PS LS+IFGGQLKSVVKA+G KASATVQP+LLL
Sbjct: 61  SANDDGDEWETVGPKNKSAVTRTQSFVPSELSEIFGGQLKSVVKAKGTKASATVQPYLLL 120

Query: 400 HLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMR 459
           HLDI+ + V  IEDAL LFSA E+LEGYR S TG  GVV+A KS+KIQ LSKI+ILHLMR
Sbjct: 121 HLDIHPDGVQGIEDALHLFSAQEDLEGYRASVTGKTGVVSASKSIKIQKLSKIMILHLMR 180

Query: 460 FSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQF 497
           FSYGSQGSTKL K V+FPL+L L R  LV+ S E L++
Sbjct: 181 FSYGSQGSTKLRKGVKFPLELNLNRSHLVSLSNESLRY 218


>gi|168036283|ref|XP_001770637.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678158|gb|EDQ64620.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 271

 Score =  254 bits (648), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 126/208 (60%), Positives = 166/208 (79%), Gaps = 8/208 (3%)

Query: 282 MFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVS 341
           MF+ VL++F+PD P    GRPRQEDAQEFLS +MD++H+ELL L+G S  I G N    +
Sbjct: 1   MFDDVLRSFSPDQPPR--GRPRQEDAQEFLSHVMDRLHEELLWLEGRS--IVGQN----A 52

Query: 342 LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHL 401
           + +++EWE VGPKNKSA+TRT   + S LSDIFGGQL SVVKA+GNKASATVQPFL+LHL
Sbjct: 53  VVDDEEWEIVGPKNKSALTRTHMTIKSPLSDIFGGQLCSVVKAKGNKASATVQPFLVLHL 112

Query: 402 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 461
           DI S+AV +IEDALR F+APE+LEGY+ +S+  + VV+A K++KIQ+L  +LI+HLMRFS
Sbjct: 113 DILSDAVQSIEDALRFFAAPESLEGYKAASSKASEVVSASKAIKIQSLPSVLIVHLMRFS 172

Query: 462 YGSQGSTKLHKSVRFPLQLVLGRDLLVT 489
           YG+ GS KL+K++++   L +GR+LL T
Sbjct: 173 YGASGSGKLNKAIKYSNSLTIGRELLAT 200


>gi|414887984|tpg|DAA63998.1| TPA: hypothetical protein ZEAMMB73_048281, partial [Zea mays]
          Length = 368

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 162/389 (41%), Positives = 208/389 (53%), Gaps = 50/389 (12%)

Query: 5   KLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESSLVGTT 64
           K+ +FGSFTE+ET+  LQ Q   S  K VS     K  E  E+QFG+LN           
Sbjct: 7   KMLLFGSFTEDETK-LLQGQPLKSPTKSVS-----KECERTEIQFGTLNLSVL------- 53

Query: 65  DEPNGKSVVDGPVVFQPSTLLKKDDKVKSVGASNDHDLGAVGCPKENGHIKNSTNGPALS 124
              N + +    VV    +   +   +    A N+    A G    NG       GP L+
Sbjct: 54  ---NLEKISTSSVVLPAKSAKGETSAITKENACNNEK-KAAGSSLSNG-------GPVLA 102

Query: 125 NG---VNHLKADGIDFSSFHQNA--------GGHANPSPISKFHVLCDGN--IDGRDQNA 171
           NG   VN    +G+ F +    A           +NP+P        DG    + R  N 
Sbjct: 103 NGCPPVNVPANNGL-FENVKTEAVVPPVIPVKIISNPTPQMTLETHKDGTKPTESRKLNK 161

Query: 172 A---ACNSS-------ISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALM 221
                 N S       ++   E  + ++N+       LLP GL N+GN+CFLNATLQAL+
Sbjct: 162 EREITENGSPIVDKHIVAAPAEEAVTSLNKKASQNMPLLPHGLRNTGNICFLNATLQALL 221

Query: 222 SCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPS 281
           SCSPFV LLQ+LR R IPK GYPTL+AFV  +S  D P     KK    +    +P +P+
Sbjct: 222 SCSPFVYLLQDLRNRRIPKVGYPTLSAFVELISQLDVPDESVIKKNEKVITVAAKPLNPA 281

Query: 282 MFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVS 341
           MF+AVL+NFTPDVP  I+ RPRQEDAQEFLSF MD+MHDELLKL G+   +N     +VS
Sbjct: 282 MFDAVLRNFTPDVPAGITARPRQEDAQEFLSFAMDRMHDELLKLNGD--GLNSKEGMVVS 339

Query: 342 LAEEDEWETVGPKNKSAVTRTQSFLPSAL 370
            A++D WETVG KNKSA+ RTQSF+PS L
Sbjct: 340 SADDDAWETVGRKNKSAIVRTQSFVPSEL 368


>gi|413968370|gb|AFW90523.1| ubiquitin carboxyl-terminal hydrolase 24-like protein [Phaseolus
           vulgaris]
          Length = 530

 Score =  244 bits (623), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 119/152 (78%), Positives = 132/152 (86%)

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWETVGPKNKSAVTRTQS  PS LS IFGGQL+S+VKA+GNK SATVQP+LLLHLDIY 
Sbjct: 321 DEWETVGPKNKSAVTRTQSLAPSELSCIFGGQLQSMVKAKGNKPSATVQPYLLLHLDIYP 380

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ 465
           + VHTIEDALRLFSA E LEGYR S T  AGVVTA+KSV+I TL KI+ILHLMRF YGSQ
Sbjct: 381 DTVHTIEDALRLFSASEALEGYRASLTAKAGVVTARKSVQIVTLPKIMILHLMRFGYGSQ 440

Query: 466 GSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQF 497
           GSTKLHK+V FPL+LVLGRDLLV+PS E  ++
Sbjct: 441 GSTKLHKAVHFPLELVLGRDLLVSPSTEGRKY 472



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 75/152 (49%), Gaps = 28/152 (18%)

Query: 6   LFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGT-ESSLVGTT 64
           + +FGSFTE+ETRS L  QSSG+          EK AE  +LQFGSLN  T ES+ +  +
Sbjct: 1   MLLFGSFTEDETRSLLSKQSSGN---------NEKSAEKNQLQFGSLNSVTVESNNLQNS 51

Query: 65  DEPNGKSVVDGPVVFQPSTLLKKDDKVKSVGASNDHDLGAVGCPKENGHIKNSTNGPALS 124
            + +  ++  G          +K + VK+V   +D+     G  KENG I N +  P   
Sbjct: 52  SKASASALPSGS---------QKCNGVKNV---SDNSSEVSGTIKENGSITNFSPNPMGI 99

Query: 125 NGVNHLKADGIDFSSFHQNAGGHANPSPISKF 156
            GVN ++   +++ +     G      P SKF
Sbjct: 100 AGVNEVEKKNVNWFTLLDEDG------PSSKF 125


>gi|375152198|gb|AFA36557.1| putative ubiquitin-specific protease, partial [Lolium perenne]
          Length = 168

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 117/172 (68%), Positives = 138/172 (80%), Gaps = 5/172 (2%)

Query: 295 PNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPK 354
           P   S RPRQEDAQEFLSF MD+MHDELLKL G     N     +VS +++D WETVG K
Sbjct: 1   PAGTSARPRQEDAQEFLSFAMDRMHDELLKLNGS----NSKEGMVVSASDDDAWETVGRK 56

Query: 355 NKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDA 414
           NKSA+ RTQS +PS LS IFGG+L+S+VKA GNK SAT+QPFLLLHLDI+ +AVHT+EDA
Sbjct: 57  NKSAIMRTQSLVPSELSAIFGGELQSMVKAAGNKPSATIQPFLLLHLDIFPDAVHTVEDA 116

Query: 415 LRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG 466
           L LFS PE+LEGYRT++ G AGVVTA+KS +I TLSKI+ILHL RFSYG+ G
Sbjct: 117 LHLFSTPESLEGYRTAA-GKAGVVTARKSFQIHTLSKIMILHLKRFSYGNHG 167


>gi|148225368|ref|NP_001080643.1| ubiquitin carboxyl-terminal hydrolase 10-B [Xenopus laevis]
 gi|82176651|sp|Q7ZXR7.1|UB10B_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 10-B; AltName:
           Full=Deubiquitinating enzyme 10-B; AltName:
           Full=Ubiquitin thioesterase 10-B; AltName:
           Full=Ubiquitin-specific-processing protease 10-B
 gi|28277342|gb|AAH44285.1| Usp10-prov protein [Xenopus laevis]
          Length = 805

 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 118/326 (36%), Positives = 186/326 (57%), Gaps = 35/326 (10%)

Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAG 242
           +K +++PV     L PRGLIN GN C++NATLQAL++C P   L++ +        P   
Sbjct: 410 VKLVHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPVYTKAQRPCTS 465

Query: 243 YPTLTAFVGFVSDF-DTPSGGSSKK----KNISVLDIGRPFSPSMFEAVLKNFTPDVPNS 297
            P + +FV  +++F + P    +K+    K I  +  G PF P+    +L  F     +S
Sbjct: 466 TPMIDSFVRLMNEFTNMPILPKAKQAPGEKVIKDIRPGAPFEPTYIYRLLTVFK----SS 521

Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAE------- 344
           +S + RQEDA+E+L FI++ +H+E+L L      Q +   IN     +  + E       
Sbjct: 522 LSEKGRQEDAEEYLGFILNGLHEEMLALKKLLLPQNDQIHINNCPNPVSGVEEVNKEEQE 581

Query: 345 --EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLD 402
             ++EWE VGP+NKS+VTR   F+ + ++DIFGG ++SVV  Q +K SAT+QPF  L LD
Sbjct: 582 GSDEEWEQVGPRNKSSVTRQADFVQTPITDIFGGHMRSVVYQQSSKESATLQPFFTLQLD 641

Query: 403 IYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 462
           I SE + T++DAL    A E+++GY T +     +    + V ++ L  +L+LHL RF +
Sbjct: 642 IQSEKIRTVQDALESLVARESVQGYTTKTKQEVEIC---RRVTLEELPPVLVLHLKRFVF 698

Query: 463 -GSQGSTKLHKSVRFPLQLVLGRDLL 487
             + G  KL K++ +P+ L + +DLL
Sbjct: 699 EKTGGCQKLIKNIEYPVDLEVSKDLL 724


>gi|147902172|ref|NP_001090293.1| ubiquitin carboxyl-terminal hydrolase 10-A [Xenopus laevis]
 gi|123895418|sp|Q2NL57.1|UB10A_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 10-A; AltName:
           Full=Deubiquitinating enzyme 10-A; AltName:
           Full=Ubiquitin thioesterase 10-A; AltName:
           Full=Ubiquitin-specific-processing protease 10-A
 gi|84708827|gb|AAI10954.1| MGC132196 protein [Xenopus laevis]
          Length = 791

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/327 (36%), Positives = 185/327 (56%), Gaps = 37/327 (11%)

Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAG 242
           +K +++PV     L PRGLIN GN C++NATLQAL++C P   L++ +        P   
Sbjct: 396 VKLVHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPVYTKAQKPCTS 451

Query: 243 YPTLTAFVGFVSDFDT----PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPN 296
            P + +FV  +++F      P    +  + + V DI  G PF P+    +L  F     +
Sbjct: 452 TPMIDSFVRLMNEFTNMPILPKAKQAPGEKV-VRDIRPGAPFEPAYIYRLLTVFK----S 506

Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAE------ 344
           S+S + RQEDA+E+L FI++ +H+E+L L      Q +   IN     + +  E      
Sbjct: 507 SLSEKGRQEDAEEYLGFILNGLHEEMLALKKLLLPQNDKIHINNGPDPVFATEEVNKEEQ 566

Query: 345 ---EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHL 401
              ++EWE VGP+NKS+VTR   F+ + ++DIFGG ++SVV  Q +K SAT+QPF  L L
Sbjct: 567 EGSDEEWEQVGPRNKSSVTRQADFVQTPITDIFGGHMRSVVYQQSSKESATLQPFFTLQL 626

Query: 402 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 461
           DI SE + T++DAL    A E+++GY T +     +    + V ++ L  +L+LHL RF 
Sbjct: 627 DIQSEKIRTVQDALESLVARESVQGYTTKTKQEVEIC---RRVTLEELPPVLVLHLKRFV 683

Query: 462 Y-GSQGSTKLHKSVRFPLQLVLGRDLL 487
           +  + G  KL K++ +P+ L + +DLL
Sbjct: 684 FEKTGGCQKLIKNIEYPVDLEISKDLL 710


>gi|55742513|ref|NP_001006761.1| ubiquitin carboxyl-terminal hydrolase 10 [Xenopus (Silurana)
           tropicalis]
 gi|82183396|sp|Q6DIJ4.1|UBP10_XENTR RecName: Full=Ubiquitin carboxyl-terminal hydrolase 10; AltName:
           Full=Deubiquitinating enzyme 10; AltName: Full=Ubiquitin
           thioesterase 10; AltName:
           Full=Ubiquitin-specific-processing protease 10
 gi|49522494|gb|AAH75544.1| ubiquitin specific peptidase 10 [Xenopus (Silurana) tropicalis]
 gi|89273888|emb|CAJ83514.1| ubiquitin specific protease 10 [Xenopus (Silurana) tropicalis]
          Length = 805

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 117/326 (35%), Positives = 186/326 (57%), Gaps = 35/326 (10%)

Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAG 242
           +K +++PV     L PRGLIN GN C++NATLQAL++C P   L++ +        P   
Sbjct: 410 VKLVHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPVYTKAQRPCTS 465

Query: 243 YPTLTAFVGFVSDF-DTP----SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNS 297
            P + +FV  +++F + P    +  +S +K I  +  G PF P+    +L  F     +S
Sbjct: 466 TPMIDSFVRLMNEFTNMPILPKAKQASGEKVIRDIRPGAPFEPAYIYRLLTVFK----SS 521

Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAE------- 344
           +S + RQEDA+E+L FI++ +H+E+L L      Q +   IN     +    E       
Sbjct: 522 LSEKGRQEDAEEYLGFILNGLHEEMLSLKKLLLPQNDKIHINNGPDPVSEKEEINKDEQE 581

Query: 345 --EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLD 402
             ++EWE VGP++KS+VTR   F+ + ++DIFGG ++SVV  Q +K SAT+QPF  L LD
Sbjct: 582 GSDEEWEQVGPRHKSSVTRQADFVQTPITDIFGGHMRSVVYQQSSKESATLQPFFTLQLD 641

Query: 403 IYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 462
           I SE + T++DAL    A E+++GY T +     +    + V ++ L  +L+LHL RF +
Sbjct: 642 IQSEKIRTVQDALESLVARESVQGYTTKTKQEVEIC---RRVTLEELPPVLVLHLKRFVF 698

Query: 463 -GSQGSTKLHKSVRFPLQLVLGRDLL 487
             + G  KL K++ +P+ L + +DLL
Sbjct: 699 EKTGGCQKLIKNIEYPVDLEISKDLL 724


>gi|326669691|ref|XP_685621.5| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 isoform 1
           [Danio rerio]
          Length = 865

 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 116/327 (35%), Positives = 187/327 (57%), Gaps = 36/327 (11%)

Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAG 242
           +K I++PV     L PRGLIN GN C++NATLQAL++C P   L++ +        P   
Sbjct: 469 VKLIHKPVS----LQPRGLINKGNWCYINATLQALIACPPMYHLMKSIPLFSETQRPCTS 524

Query: 243 YPTLTAFVGFVSDFD---TPSGGSSK---KKNISVLDIGRPFSPSMFEAVLKNFTPDVPN 296
            P +  F+  V++F     PS    +   +K +  L +G PF P+    +L      + +
Sbjct: 525 TPMMDNFIRLVNEFSNMPVPSKAKQQAAGEKILKDLRVGAPFEPTYVYKLLTL----IKS 580

Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELLKL-------QGESTSINGANT--------ALVS 341
           S+S + RQEDA+E+L FI++ +H+E+L L       + ++ + NG  +        A   
Sbjct: 581 SLSEKGRQEDAEEYLGFILNGLHEEMLALKKLISPQEEKAPTPNGPESQPGVEEDPAEKE 640

Query: 342 LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHL 401
              +DEWE VGP+NK+++TR   F+ + ++DIFGG ++SVV  Q +K SAT+QPF  L L
Sbjct: 641 EGSDDEWEQVGPRNKTSITRQADFIRTPITDIFGGHIRSVVYQQSSKESATLQPFFTLQL 700

Query: 402 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 461
           DI SE + T+++AL +  A E+++GY T S      +   + V ++ L  +L+LHL RF 
Sbjct: 701 DIQSEKIRTVQEALEVLVARESVQGYTTKSKQE---IEISRRVTLEELPPVLVLHLKRFV 757

Query: 462 Y-GSQGSTKLHKSVRFPLQLVLGRDLL 487
           +  + G  KL K++ +P+ L + +DLL
Sbjct: 758 FEKTGGCQKLIKTIDYPVDLEISKDLL 784


>gi|260805678|ref|XP_002597713.1| hypothetical protein BRAFLDRAFT_217385 [Branchiostoma floridae]
 gi|229282980|gb|EEN53725.1| hypothetical protein BRAFLDRAFT_217385 [Branchiostoma floridae]
          Length = 402

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/312 (38%), Positives = 174/312 (55%), Gaps = 29/312 (9%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 258
           L PRGL+N GN C++NATLQA+++C P   L++ +     P    PT T  +  + +F +
Sbjct: 16  LQPRGLVNKGNWCYINATLQAMVACPPMYNLMKNMPLPSSPNKRGPTATPILDCLMEFTS 75

Query: 259 PSGGS-------SKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 311
             G         + KK    L  G PF P+    +L      + +++S + RQEDA+EFL
Sbjct: 76  EFGSMPNSQKTIAGKKPAQDLRPGSPFEPTYVYHMLSL----IKSTLSSKGRQEDAEEFL 131

Query: 312 SFIMDQMHDELL-KLQGESTSI-----------NGANTALVSLAEE---DEWETVGPKNK 356
           S +++ +H+E+  K+ GE T             +GA    +   EE   DEWE VGPKNK
Sbjct: 132 SCVLNGIHEEMQPKMNGELTPKSDGPSSPTPREDGAVEGFMMEQEEGDEDEWEQVGPKNK 191

Query: 357 SAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALR 416
           S VTRT +F+ + +SDIFGGQL+S+    G + SAT+QPF  L LDI SE + T++DAL 
Sbjct: 192 STVTRTANFVRTPVSDIFGGQLRSIFHQHGTRESATLQPFFTLQLDIQSEKIWTVKDALE 251

Query: 417 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG-SQGSTKLHKSVR 475
                E + GY  S T     V A + + I+ L  +L+LHL RF Y  + GS K+ K V 
Sbjct: 252 AMVTKETIHGYTCSKTKQE--VEASRRMMIEELPPVLVLHLKRFVYDKTGGSQKVQKRVD 309

Query: 476 FPLQLVLGRDLL 487
           F ++L + ++LL
Sbjct: 310 FNIELDINKELL 321


>gi|387019601|gb|AFJ51918.1| Ubiquitin carboxyl-terminal hydrolase 10 [Crotalus adamanteus]
          Length = 783

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/325 (37%), Positives = 188/325 (57%), Gaps = 35/325 (10%)

Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL----RTRDIPKA 241
           +K I++PV     L PRGLIN GN C++NATLQAL++C P   L++ +    +T+  P  
Sbjct: 390 VKLIHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPMFSKTQR-PCT 444

Query: 242 GYPTLTAFVGFVSDFDTPSGGSSKKKNIS---VLDI--GRPFSPSMFEAVLKNFTPDVPN 296
             P + +FV  +++F         K+ +S     DI  G  F P+    +L      + +
Sbjct: 445 STPMIDSFVRLMNEFTNMPVPPKAKQALSDKIARDIRPGAAFEPTYIYRLLTV----IKS 500

Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELLKLQG----ESTSINGANTALVSLAEE------- 345
           S+S + RQEDA+E+L FI++ +H+E+L L+      S   NG  T LV+  +E       
Sbjct: 501 SLSEKGRQEDAEEYLGFILNGLHEEMLILKKLLSPHSEISNGPETQLVNEEDEQEEQGEG 560

Query: 346 --DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDI 403
             DEWE VGP+NKS+VTR   F+ + ++DIFGG ++SVV  Q +K SAT+QPF  L LDI
Sbjct: 561 SEDEWEQVGPRNKSSVTRQADFVQTPITDIFGGHIRSVVYQQSSKESATLQPFFTLQLDI 620

Query: 404 YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY- 462
            S+ + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y 
Sbjct: 621 QSDRIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEELPPVLVLHLKRFVYE 677

Query: 463 GSQGSTKLHKSVRFPLQLVLGRDLL 487
            + G  KL K++ +P+ L + ++LL
Sbjct: 678 KTGGCQKLIKNIEYPVDLEISKELL 702


>gi|57524928|ref|NP_001006130.1| ubiquitin carboxyl-terminal hydrolase 10 [Gallus gallus]
 gi|75571288|sp|Q5ZJN4.1|UBP10_CHICK RecName: Full=Ubiquitin carboxyl-terminal hydrolase 10; AltName:
           Full=Deubiquitinating enzyme 10; AltName: Full=Ubiquitin
           thioesterase 10; AltName:
           Full=Ubiquitin-specific-processing protease 10
 gi|53133460|emb|CAG32059.1| hypothetical protein RCJMB04_16o18 [Gallus gallus]
          Length = 785

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 119/327 (36%), Positives = 182/327 (55%), Gaps = 36/327 (11%)

Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAG 242
           +K +++PV     L PRGLIN GN C++NATLQAL++C P   L++ +        P   
Sbjct: 389 VKLVHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPMYSKSQRPCTS 444

Query: 243 YPTLTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNS 297
            P + +FV  +++F     P        +  V DI  G  F P+    +L      + +S
Sbjct: 445 TPMIDSFVRLMNEFTNMPVPPKAKQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSS 500

Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALV---------S 341
           +S + RQEDA+E+L FI++ +H+E+L L+       E  S+ NG     V          
Sbjct: 501 LSEKGRQEDAEEYLGFILNGLHEEMLTLKKLLSPHNEKLSVSNGPEVQTVREEEEQDEQG 560

Query: 342 LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHL 401
              EDEWE VGP+NKS+VTR   F+ + ++DIFGG ++SVV  Q +K SAT+QPF  L L
Sbjct: 561 EGSEDEWEQVGPRNKSSVTRQADFVQTPITDIFGGHIRSVVYQQSSKESATLQPFFTLQL 620

Query: 402 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 461
           DI S+ + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF 
Sbjct: 621 DIQSDKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEELPPVLVLHLKRFV 677

Query: 462 Y-GSQGSTKLHKSVRFPLQLVLGRDLL 487
           Y  + G  KL K++ +P+ L + ++LL
Sbjct: 678 YEKTGGCQKLIKNIEYPVDLEISKELL 704


>gi|326927485|ref|XP_003209923.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like [Meleagris
           gallopavo]
          Length = 816

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 119/327 (36%), Positives = 182/327 (55%), Gaps = 36/327 (11%)

Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAG 242
           +K +++PV     L PRGLIN GN C++NATLQAL++C P   L++ +        P   
Sbjct: 411 VKLVHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPMYSKSQRPCTS 466

Query: 243 YPTLTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNS 297
            P + +FV  +++F     P        +  V DI  G  F P+    +L      + +S
Sbjct: 467 TPMIDSFVRLMNEFTNMPVPPKAKQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSS 522

Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALV---------S 341
           +S + RQEDA+E+L FI++ +H+E+L L+       E  S+ NG     V          
Sbjct: 523 LSEKGRQEDAEEYLGFILNGLHEEMLTLKKLLSPHNEKLSVSNGPEVQTVHEEEEQDEQG 582

Query: 342 LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHL 401
              EDEWE VGP+NKS+VTR   F+ + ++DIFGG ++SVV  Q +K SAT+QPF  L L
Sbjct: 583 EGSEDEWEQVGPRNKSSVTRQADFVQTPITDIFGGHIRSVVYQQSSKESATLQPFFTLQL 642

Query: 402 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 461
           DI S+ + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF 
Sbjct: 643 DIQSDKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEELPPVLVLHLKRFV 699

Query: 462 Y-GSQGSTKLHKSVRFPLQLVLGRDLL 487
           Y  + G  KL K++ +P+ L + ++LL
Sbjct: 700 YEKTGGCQKLIKNIEYPVDLEISKELL 726


>gi|47230410|emb|CAF99603.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 832

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/328 (35%), Positives = 185/328 (56%), Gaps = 37/328 (11%)

Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQE---LRTRDIPKAG 242
           +K I++PV     L PRGL+N GN C++NATLQAL++C P   L++    L     P   
Sbjct: 435 VKLIHKPVS----LQPRGLVNKGNWCYINATLQALVACPPMYHLMKSIPLLNETQRPCTS 490

Query: 243 YPTLTAFVGFVSDF-DTPSGGSSKKKNIS---VLDI--GRPFSPSMFEAVLKNFTPDVPN 296
            P +  FV  V++F + P    +K++ +    V DI  G PF P+    +L      + +
Sbjct: 491 TPMIDNFVRLVNEFSNMPVPSKAKQQGVGDKVVKDIRPGVPFEPTYIYKLLTL----IKS 546

Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAE------ 344
           S+S + RQEDA+E+L F ++ +H+E+L L      Q E         +   + E      
Sbjct: 547 SLSEKGRQEDAEEYLGFTLNGLHEEMLALKKLVLPQEEKAPPPNGPESQPGMEEDAADKD 606

Query: 345 ----EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLH 400
               EDEWE VGP+NK+++TR   F+ + ++DIFGG ++SVV  Q +K SAT+QPF  L 
Sbjct: 607 EEGSEDEWEQVGPRNKTSITRQADFVRTPITDIFGGHIRSVVYQQNSKESATLQPFFTLQ 666

Query: 401 LDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRF 460
           LDI SE + T+++AL    A E+++GY   ++ N   +   + V ++ L  +L+LHL RF
Sbjct: 667 LDIQSEKIRTVQEALETMVARESVQGY---TSKNKQEIEISRRVTLEELPPVLVLHLKRF 723

Query: 461 SY-GSQGSTKLHKSVRFPLQLVLGRDLL 487
            +  + G  KL K++ +P+ L + +DLL
Sbjct: 724 VFEKTGGCQKLSKNIDYPVDLEISKDLL 751


>gi|449282514|gb|EMC89347.1| Ubiquitin carboxyl-terminal hydrolase 10, partial [Columba livia]
          Length = 787

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/327 (36%), Positives = 182/327 (55%), Gaps = 36/327 (11%)

Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAG 242
           ++ I++PV     L PRGLIN GN C++NATLQAL++C P   L++ +        P   
Sbjct: 391 VRLIHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPMYSKSQRPCTS 446

Query: 243 YPTLTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNS 297
            P + +FV  +++F     P        +  V DI  G  F P+    +L      + +S
Sbjct: 447 TPMIDSFVRLMNEFTNMPVPPKAKQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSS 502

Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALV---------S 341
           +S + RQEDA+E+L FI++ +H+E+L L+       E  ++ NG     V          
Sbjct: 503 LSEKGRQEDAEEYLGFILNGLHEEMLTLKKLLSPHNEKLAVSNGPEAQTVHEEEEQDEQG 562

Query: 342 LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHL 401
              EDEWE VGP+NKS+VTR   F+ + ++DIFGG ++SVV  Q +K SAT+QPF  L L
Sbjct: 563 EGSEDEWEQVGPRNKSSVTRQADFIQTPITDIFGGHIRSVVYQQSSKESATLQPFFTLQL 622

Query: 402 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 461
           DI S+ + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF 
Sbjct: 623 DIQSDKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEELPPVLVLHLKRFV 679

Query: 462 Y-GSQGSTKLHKSVRFPLQLVLGRDLL 487
           Y  + G  KL K++ +P+ L + ++LL
Sbjct: 680 YEKTGGCQKLIKNIEYPVDLEISKELL 706


>gi|224072835|ref|XP_002303904.1| predicted protein [Populus trichocarpa]
 gi|222841336|gb|EEE78883.1| predicted protein [Populus trichocarpa]
          Length = 231

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/244 (50%), Positives = 151/244 (61%), Gaps = 17/244 (6%)

Query: 1   MSDSK-LFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESS 59
           MSDSK + VFGSFTE+ET+S L  QS G V         EKP E  EL+FGSLNFGT  +
Sbjct: 1   MSDSKKVLVFGSFTEDETKSLLGKQSPGKV---------EKPVEKIELRFGSLNFGTGIT 51

Query: 60  LVGTTDEPNGK-SVVDGPVVFQPSTLLKKDDKVKSVGASNDHDLGAVGCPKENGHIKNST 118
                   N + +  +G V  Q  +L+ K+  VK V    D   G +G P+ENG I NS 
Sbjct: 52  FGNFDTTLNTQLASANGNVTSQSKSLVMKEKDVK-VAKEGD---GVLGSPRENGSIGNSN 107

Query: 119 NGPALSNGVNHLKADGIDFSSFH--QNAGGHANPSPISKFHVLCDGNIDGRDQNAAACNS 176
           +G +LSNGV+ LK + ID +S H  +   G A+P   S FHVL    I   D +    +S
Sbjct: 108 HGSSLSNGVDVLKTESIDLTSLHLSEKEDGPASPLQSSSFHVLDSEGIKDGDHDGTTNDS 167

Query: 177 SISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR 236
           SI   KE   KA + P+ +VK LLPRGLIN+GNLCFLNATLQAL+SCSPFVQLLQELR R
Sbjct: 168 SIHVRKEDVWKANDGPLPAVKSLLPRGLINTGNLCFLNATLQALLSCSPFVQLLQELRIR 227

Query: 237 DIPK 240
           DIPK
Sbjct: 228 DIPK 231


>gi|410913199|ref|XP_003970076.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like [Takifugu
           rubripes]
          Length = 871

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 118/328 (35%), Positives = 185/328 (56%), Gaps = 37/328 (11%)

Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQE---LRTRDIPKAG 242
           +K I++PV     L PRGL+N GN C++NATLQAL++C P   L++    L     P   
Sbjct: 474 VKLIHKPVS----LQPRGLVNKGNWCYINATLQALIACPPMYHLMKSIPMLSETQRPCTS 529

Query: 243 YPTLTAFVGFVSDFDT-PSGGSSKKKNIS---VLDI--GRPFSPSMFEAVLKNFTPDVPN 296
            P +  FV  V++F+  P    +K++ +    + DI  G PF P+    +L      + +
Sbjct: 530 TPMMDNFVRLVNEFNNMPVPSKAKQQAVGDKVMKDIRPGVPFEPTYIYKLLTL----IKS 585

Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAE------ 344
           S+S + RQEDA+E+L F ++ +H+E+L L      Q E         +   + E      
Sbjct: 586 SLSEKGRQEDAEEYLGFTLNGLHEEMLALKKLISPQEEKAPTPNGPESQSGVEEDAADKD 645

Query: 345 ----EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLH 400
               EDEWE VGP+NK+++TR   F+ + ++DIFGG ++SVV  Q +K SAT+QPF  L 
Sbjct: 646 EEGSEDEWEQVGPRNKTSITRQADFVRTPITDIFGGHIRSVVYQQNSKESATLQPFFTLQ 705

Query: 401 LDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRF 460
           LDI SE + T+++AL    A E+++GY TS T     +   + V ++ L  +L+LHL RF
Sbjct: 706 LDIQSEKIRTVQEALETMVARESVQGY-TSKTKQE--IEISRRVTLEELPPVLVLHLKRF 762

Query: 461 SY-GSQGSTKLHKSVRFPLQLVLGRDLL 487
            +  + G  KL K++ +P+ L + +DLL
Sbjct: 763 VFEKTGGCQKLSKNIDYPVDLEISKDLL 790


>gi|77628029|ref|NP_001029318.1| ubiquitin carboxyl-terminal hydrolase 10 [Rattus norvegicus]
 gi|123780598|sp|Q3KR59.1|UBP10_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 10; AltName:
           Full=Deubiquitinating enzyme 10; AltName: Full=Ubiquitin
           thioesterase 10; AltName:
           Full=Ubiquitin-specific-processing protease 10
 gi|76779344|gb|AAI05893.1| Ubiquitin specific peptidase 10 [Rattus norvegicus]
          Length = 794

 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/313 (37%), Positives = 179/313 (57%), Gaps = 31/313 (9%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPTLTAFVGFVSD 255
           L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P + +FV  +++
Sbjct: 408 LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFVRLMNE 467

Query: 256 FD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
           F     P        +  V DI  G  F P+    +L      + +S+S + RQEDA+E+
Sbjct: 468 FTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSEKGRQEDAEEY 523

Query: 311 LSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------EDEWETVGPKN 355
           L FI++ +H+E+L L+       E  S+ NG  + L+   E        EDEWE VGPKN
Sbjct: 524 LGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPGSHLIEDEELEDTGEGSEDEWEQVGPKN 583

Query: 356 KSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDAL 415
           K++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S+ + T++DAL
Sbjct: 584 KTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDAL 643

Query: 416 RLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQGSTKLHKSV 474
               A E+++GY T +      V   + V ++ L  +L+LHL RF Y  + G  KL K++
Sbjct: 644 ESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLVKNI 700

Query: 475 RFPLQLVLGRDLL 487
            +P+ L + R+LL
Sbjct: 701 EYPVDLEISRELL 713


>gi|149038330|gb|EDL92690.1| ubiquitin specific protease 10 [Rattus norvegicus]
          Length = 795

 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/313 (37%), Positives = 179/313 (57%), Gaps = 31/313 (9%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPTLTAFVGFVSD 255
           L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P + +FV  +++
Sbjct: 409 LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFVRLMNE 468

Query: 256 FD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
           F     P        +  V DI  G  F P+    +L      + +S+S + RQEDA+E+
Sbjct: 469 FTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSEKGRQEDAEEY 524

Query: 311 LSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------EDEWETVGPKN 355
           L FI++ +H+E+L L+       E  S+ NG  + L+   E        EDEWE VGPKN
Sbjct: 525 LGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPGSHLIEDEELEDTGEGSEDEWEQVGPKN 584

Query: 356 KSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDAL 415
           K++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S+ + T++DAL
Sbjct: 585 KTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDAL 644

Query: 416 RLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQGSTKLHKSV 474
               A E+++GY T +      V   + V ++ L  +L+LHL RF Y  + G  KL K++
Sbjct: 645 ESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLVKNI 701

Query: 475 RFPLQLVLGRDLL 487
            +P+ L + R+LL
Sbjct: 702 EYPVDLEISRELL 714


>gi|395508418|ref|XP_003758509.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Sarcophilus
           harrisii]
          Length = 1048

 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 123/322 (38%), Positives = 184/322 (57%), Gaps = 34/322 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 657 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 712

Query: 246 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L      + +S+S 
Sbjct: 713 IDSFVRLMNEFTNMPIPPKAKQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 768

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE-------ED 346
           + RQEDA+E+L FI++ +H+E+L L+       E  S+ NG  T  V   E       ED
Sbjct: 769 KGRQEDAEEYLGFILNGLHEEMLNLKKLLLPNNEKFSVSNGPETHSVPEDEQEQGEGSED 828

Query: 347 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSE 406
           EWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI SE
Sbjct: 829 EWEQVGPRNKTSVTRQADFIQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSE 888

Query: 407 AVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQ 465
            +HT++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  + 
Sbjct: 889 KIHTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKTG 945

Query: 466 GSTKLHKSVRFPLQLVLGRDLL 487
           G  KL K++ +P+ L + R+LL
Sbjct: 946 GCQKLIKNIEYPVDLEISRELL 967


>gi|354465458|ref|XP_003495197.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like
           [Cricetulus griseus]
          Length = 792

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/323 (36%), Positives = 183/323 (56%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 400 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 455

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L      + +S+S 
Sbjct: 456 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 511

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG-------ESTSINGANTALVSLAE--------E 345
           + RQEDA+E+L FI++ +H+E+L L+        + T  NG  + L+   E        E
Sbjct: 512 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKLTVSNGPRSHLIEDEEQEDTGEGSE 571

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 572 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 631

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 632 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 688

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + R+LL
Sbjct: 689 GGCQKLVKNIDYPVDLEISRELL 711


>gi|344238013|gb|EGV94116.1| Ubiquitin carboxyl-terminal hydrolase 10 [Cricetulus griseus]
          Length = 772

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/323 (36%), Positives = 183/323 (56%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 380 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 435

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L      + +S+S 
Sbjct: 436 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 491

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG-------ESTSINGANTALVSLAE--------E 345
           + RQEDA+E+L FI++ +H+E+L L+        + T  NG  + L+   E        E
Sbjct: 492 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKLTVSNGPRSHLIEDEEQEDTGEGSE 551

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 552 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 611

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 612 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 668

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + R+LL
Sbjct: 669 GGCQKLVKNIDYPVDLEISRELL 691


>gi|149640242|ref|XP_001510486.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like, partial
           [Ornithorhynchus anatinus]
          Length = 793

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/324 (36%), Positives = 185/324 (57%), Gaps = 36/324 (11%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTRD-IPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L T++  P    P 
Sbjct: 400 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFVPLYTKEQRPCTSTPM 455

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     PS       +  V DI  G  F P+    +L      + +S+S 
Sbjct: 456 IDSFVRLMNEFTNMPVPSKAKQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 511

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAEE-------- 345
           + RQEDA+E+L FI++ +H+E+L L+       E  S+ NG    + +  EE        
Sbjct: 512 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKFSVSNGPEAPIANEDEEQDDQGDGS 571

Query: 346 -DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIY 404
            DEW+ VGP+NK+++TR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI 
Sbjct: 572 EDEWKQVGPRNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQ 631

Query: 405 SEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-G 463
           S+ + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  
Sbjct: 632 SDKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEK 688

Query: 464 SQGSTKLHKSVRFPLQLVLGRDLL 487
           + G  KL K++ +P+ L + ++LL
Sbjct: 689 TGGCQKLIKNIDYPVDLEISKELL 712


>gi|334312992|ref|XP_001375064.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like
           [Monodelphis domestica]
          Length = 825

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/322 (37%), Positives = 182/322 (56%), Gaps = 34/322 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++ +        P    P 
Sbjct: 434 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPVYSKVQRPCTSTPM 489

Query: 246 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L      + +S+S 
Sbjct: 490 IDSFVRLMNEFTNMPIPPKAKQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 545

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE-------ED 346
           + RQEDA+E+L FI++ +H+E+L L+       E  S+ NG +   V   E       ED
Sbjct: 546 KGRQEDAEEYLGFILNGLHEEMLNLKKLLLPNNEKFSVSNGPDAQSVHEDEQGQGEGSED 605

Query: 347 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSE 406
           EWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S+
Sbjct: 606 EWEQVGPRNKTSVTRQADFIQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSD 665

Query: 407 AVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQ 465
            +HT++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  + 
Sbjct: 666 KIHTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKTG 722

Query: 466 GSTKLHKSVRFPLQLVLGRDLL 487
           G  KL K++ +P+ L + R+LL
Sbjct: 723 GCQKLIKNIEYPVDLEISRELL 744


>gi|432104908|gb|ELK31420.1| Ubiquitin carboxyl-terminal hydrolase 10 [Myotis davidii]
          Length = 777

 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 117/323 (36%), Positives = 180/323 (55%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 385 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 440

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L      + +S+S 
Sbjct: 441 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 496

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E+L L+                +S SIN           E
Sbjct: 497 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNDKLPISNGPKSYSINEEEQEEPGEGSE 556

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 557 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 616

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 617 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 673

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 674 GGCQKLIKNIEYPVDLEISKELL 696


>gi|74138423|dbj|BAE38053.1| unnamed protein product [Mus musculus]
          Length = 792

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 119/323 (36%), Positives = 184/323 (56%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 400 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 455

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L      + +S+S 
Sbjct: 456 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 511

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------E 345
           + RQEDA+E+L FI++++H+E+L L+       E  S+ NG  + L+   E        E
Sbjct: 512 KGRQEDAEEYLGFILNRLHEEMLSLKKLLSPTHEKHSVSNGPRSDLIEDEELEDTGKGSE 571

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGPKNK+++TR   F+ + ++ IFGG ++SVV  Q +K SAT+Q F  L LDI S
Sbjct: 572 DEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQS 631

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 632 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 688

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + R+LL
Sbjct: 689 GGCQKLVKNIDYPVDLEISRELL 711


>gi|338723097|ref|XP_001499923.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Equus
           caballus]
          Length = 813

 Score =  191 bits (485), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/323 (36%), Positives = 184/323 (56%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 421 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 476

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L      + +S+S 
Sbjct: 477 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 532

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAE--------E 345
           + RQEDA+E+L FI++ +H+E+L L+       E  +I NG  +  V+  E        E
Sbjct: 533 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKSHSVNEDEQEEPDEGSE 592

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 593 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 652

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 653 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 709

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 710 GGCQKLVKNIEYPVDLEISKELL 732


>gi|74148888|dbj|BAE32139.1| unnamed protein product [Mus musculus]
          Length = 793

 Score =  191 bits (484), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 121/324 (37%), Positives = 185/324 (57%), Gaps = 37/324 (11%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 401 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 456

Query: 246 LTAFVGFVSDFD----TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSIS 299
           + +FV  +++F     TP    +    I V DI  G  F P+    +L      + +S+S
Sbjct: 457 IDSFVRLMNEFTNMPVTPKPRQALGDKI-VRDIRPGAAFEPTYIYRLLTV----IKSSLS 511

Query: 300 GRPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE-------- 344
            + RQEDA+E+L FI++ +H+E+L L+       E  S+ NG  + L+   E        
Sbjct: 512 EKGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPRSDLIEDEELEDTGKGS 571

Query: 345 EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIY 404
           EDEWE VGPKNK+++TR   F+ + ++ IFGG ++SVV  Q +K SAT+Q F  L LDI 
Sbjct: 572 EDEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQ 631

Query: 405 SEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-G 463
           S+ + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  
Sbjct: 632 SDKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEK 688

Query: 464 SQGSTKLHKSVRFPLQLVLGRDLL 487
           + G  KL K++ +P+ L + R+LL
Sbjct: 689 TGGCQKLVKNIDYPVDLEISRELL 712


>gi|281339966|gb|EFB15550.1| hypothetical protein PANDA_001250 [Ailuropoda melanoleuca]
          Length = 748

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/323 (35%), Positives = 180/323 (55%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 356 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 411

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L      + +S+S 
Sbjct: 412 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 467

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E+L L+                +S S+N           E
Sbjct: 468 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNAKLSISNGPKSHSVNEDEQEEPGEGSE 527

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 528 DEWEQVGPRNKTSVTRQAEFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 587

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 588 DRIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 644

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 645 GGCQKLIKNIEYPVDLEISKELL 667


>gi|148679672|gb|EDL11619.1| ubiquitin specific peptidase 10, isoform CRA_a [Mus musculus]
          Length = 822

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/323 (36%), Positives = 183/323 (56%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 430 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 485

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L      + +S+S 
Sbjct: 486 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 541

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------E 345
           + RQEDA+E+L FI++ +H+E+L L+       E  S+ NG  + L+   E        E
Sbjct: 542 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPRSDLIEDEELEDTGKGSE 601

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGPKNK+++TR   F+ + ++ IFGG ++SVV  Q +K SAT+Q F  L LDI S
Sbjct: 602 DEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQS 661

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 662 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 718

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + R+LL
Sbjct: 719 GGCQKLVKNIDYPVDLEISRELL 741


>gi|440908740|gb|ELR58726.1| Ubiquitin carboxyl-terminal hydrolase 10, partial [Bos grunniens
           mutus]
          Length = 794

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 178/323 (55%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++ +        P    P 
Sbjct: 402 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKLIPLYSKVQRPCTSTPM 457

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L      + +S+S 
Sbjct: 458 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 513

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E+L L+                +S S+N           E
Sbjct: 514 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNDKLTISNGPKSHSVNEDEQEEPGEGSE 573

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 574 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 633

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 634 DKIRTVQDALESLVARESVQGYTTKTRQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 690

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 691 GGCQKLIKNIEYPVDLEISKELL 713


>gi|301755200|ref|XP_002913456.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like
           [Ailuropoda melanoleuca]
          Length = 843

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/323 (35%), Positives = 180/323 (55%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 451 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 506

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L      + +S+S 
Sbjct: 507 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 562

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E+L L+                +S S+N           E
Sbjct: 563 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNAKLSISNGPKSHSVNEDEQEEPGEGSE 622

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 623 DEWEQVGPRNKTSVTRQAEFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 682

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 683 DRIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 739

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 740 GGCQKLIKNIEYPVDLEISKELL 762


>gi|13938036|gb|AAH07134.1| Ubiquitin specific peptidase 10 [Mus musculus]
          Length = 792

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/323 (36%), Positives = 183/323 (56%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 400 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 455

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L      + +S+S 
Sbjct: 456 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 511

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------E 345
           + RQEDA+E+L FI++ +H+E+L L+       E  S+ NG  + L+   E        E
Sbjct: 512 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPRSDLIEDEELEDTGKGSE 571

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGPKNK+++TR   F+ + ++ IFGG ++SVV  Q +K SAT+Q F  L LDI S
Sbjct: 572 DEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQS 631

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 632 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 688

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + R+LL
Sbjct: 689 GGCQKLVKNIDYPVDLEISRELL 711


>gi|37359830|dbj|BAC97893.1| mKIAA0190 protein [Mus musculus]
          Length = 818

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/323 (36%), Positives = 183/323 (56%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 426 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 481

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L      + +S+S 
Sbjct: 482 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 537

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------E 345
           + RQEDA+E+L FI++ +H+E+L L+       E  S+ NG  + L+   E        E
Sbjct: 538 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPRSDLIEDEELEDTGKGSE 597

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGPKNK+++TR   F+ + ++ IFGG ++SVV  Q +K SAT+Q F  L LDI S
Sbjct: 598 DEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQS 657

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 658 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 714

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + R+LL
Sbjct: 715 GGCQKLVKNIDYPVDLEISRELL 737


>gi|350584818|ref|XP_003126873.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Sus scrofa]
          Length = 481

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/323 (36%), Positives = 181/323 (56%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRT---RDIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++ +        P    P 
Sbjct: 89  IHKPV----SLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPVFSKVQRPCTSTPM 144

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  + DI  G  F P+    +L      + +S+S 
Sbjct: 145 IDSFVRLMNEFTNMPVPPKPRQALGDKVMRDIRPGAAFEPTYIYRLLTV----IKSSLSE 200

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG-------ESTSINGANTALVSLAE--------E 345
           + RQEDA+E+L FI++ +H+E+L L+        + T  NG  + LV   E        E
Sbjct: 201 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPDNEKLTVSNGPQSHLVDEDEQEEPGEGSE 260

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 261 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 320

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 321 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 377

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 378 GGCQKLIKNIEYPVDLEISKELL 400


>gi|149642779|ref|NP_001092394.1| ubiquitin carboxyl-terminal hydrolase 10 [Bos taurus]
 gi|292630919|sp|A5PJS6.1|UBP10_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 10; AltName:
           Full=Deubiquitinating enzyme 10; AltName: Full=Ubiquitin
           thioesterase 10; AltName:
           Full=Ubiquitin-specific-processing protease 10
 gi|148743862|gb|AAI42224.1| USP10 protein [Bos taurus]
 gi|296478182|tpg|DAA20297.1| TPA: ubiquitin carboxyl-terminal hydrolase 10 [Bos taurus]
          Length = 800

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 178/323 (55%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++ +        P    P 
Sbjct: 408 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKLIPLYSKVQRPCTSTPM 463

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L      + +S+S 
Sbjct: 464 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 519

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E+L L+                +S S+N           E
Sbjct: 520 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNDKLTISNGPKSHSVNEDEQEEPGEGSE 579

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 580 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 639

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 640 DKIRTVQDALESLVARESVQGYTTKTRQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 696

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 697 GGCQKLIKNIEYPVDLEISKELL 719


>gi|6678493|ref|NP_033488.1| ubiquitin carboxyl-terminal hydrolase 10 [Mus musculus]
 gi|1255636|dbj|BAA12220.1| ubiquitin carboxyl-terminal hydrolase (UBP) [Mus musculus]
 gi|74192398|dbj|BAE43006.1| unnamed protein product [Mus musculus]
 gi|148679673|gb|EDL11620.1| ubiquitin specific peptidase 10, isoform CRA_b [Mus musculus]
          Length = 793

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/323 (36%), Positives = 183/323 (56%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 401 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 456

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L      + +S+S 
Sbjct: 457 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 512

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------E 345
           + RQEDA+E+L FI++ +H+E+L L+       E  S+ NG  + L+   E        E
Sbjct: 513 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPRSDLIEDEELEDTGKGSE 572

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGPKNK+++TR   F+ + ++ IFGG ++SVV  Q +K SAT+Q F  L LDI S
Sbjct: 573 DEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQS 632

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 633 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 689

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + R+LL
Sbjct: 690 GGCQKLVKNIDYPVDLEISRELL 712


>gi|292495057|sp|P52479.3|UBP10_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 10; AltName:
           Full=Deubiquitinating enzyme 10; AltName: Full=Ubiquitin
           thioesterase 10; AltName:
           Full=Ubiquitin-specific-processing protease 10
          Length = 792

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/323 (36%), Positives = 183/323 (56%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 400 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 455

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L      + +S+S 
Sbjct: 456 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 511

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------E 345
           + RQEDA+E+L FI++ +H+E+L L+       E  S+ NG  + L+   E        E
Sbjct: 512 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPRSDLIEDEELEDTGKGSE 571

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGPKNK+++TR   F+ + ++ IFGG ++SVV  Q +K SAT+Q F  L LDI S
Sbjct: 572 DEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQS 631

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 632 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 688

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + R+LL
Sbjct: 689 GGCQKLVKNIDYPVDLEISRELL 711


>gi|426243414|ref|XP_004023443.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 10 [Ovis aries]
          Length = 844

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/323 (36%), Positives = 184/323 (56%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 452 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 507

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L      + +S+S 
Sbjct: 508 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 563

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAE--------E 345
           + RQEDA+E+L FI++ +H+E+L L+       E  +I NG  +  V+  E        E
Sbjct: 564 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPKSHSVNEDEQEEPGEGSE 623

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 624 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 683

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 684 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 740

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 741 GGCQKLIKNIEYPVDLEISKELL 763


>gi|74192179|dbj|BAE34291.1| unnamed protein product [Mus musculus]
          Length = 793

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/323 (36%), Positives = 181/323 (56%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDI---PKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++ +        P    P 
Sbjct: 401 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQGPCTSTPM 456

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L      + +S+S 
Sbjct: 457 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 512

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------E 345
           + RQEDA+E+L FI++ +H+E+L L+       E  S+ NG  + L+   E        E
Sbjct: 513 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPRSDLIEDEELEDTGKGSE 572

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGPKNK+++TR   F+ + ++ IFGG ++SVV  Q +K SAT+Q F  L LDI S
Sbjct: 573 DEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQS 632

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 633 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 689

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + R+LL
Sbjct: 690 GGCQKLVKNIDYPVDLEISRELL 712


>gi|355727892|gb|AES09345.1| ubiquitin specific peptidase 10 [Mustela putorius furo]
          Length = 788

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/323 (35%), Positives = 180/323 (55%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 396 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 451

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L      + +S+S 
Sbjct: 452 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 507

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E+L L+                +S S+N           E
Sbjct: 508 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLPVSNGPKSHSVNEDEQEEPGEGSE 567

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 568 DEWEQVGPRNKTSVTRQAEFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 627

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 628 DRIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 684

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 685 GGCQKLVKNIDYPVDLEISKELL 707


>gi|73957166|ref|XP_536761.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Canis lupus
           familiaris]
          Length = 834

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/323 (36%), Positives = 184/323 (56%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 442 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 497

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L      + +S+S 
Sbjct: 498 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 553

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAE--------E 345
           + RQEDA+E+L FI++ +H+E+L L+       E  +I NG  +  V+  +        E
Sbjct: 554 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPNNEKLTISNGPKSHSVTEDDQEEPGEGSE 613

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 614 DEWEQVGPRNKTSVTRQAEFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 673

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 674 DRIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 730

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 731 GGCQKLIKNIEYPVDLEISKELL 753


>gi|344292966|ref|XP_003418195.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like [Loxodonta
           africana]
          Length = 958

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/323 (36%), Positives = 181/323 (56%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++ +        P    P 
Sbjct: 566 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPVYSKAQRPCTSTPM 621

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L      + +S+S 
Sbjct: 622 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 677

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG-------ESTSINGANTALVSLAEE-------- 345
           + RQEDA+E+L FI++ +H+E+L L+        + T  NG  + LV+  E         
Sbjct: 678 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPNNEKLTVSNGPKSPLVNEEEREEQGEGSE 737

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 738 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQTSKESATLQPFFTLQLDIQS 797

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 798 DKIRTVQDALESLVARESVQGYTTKTRQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 854

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 855 GGCQKLIKNIEYPVDLEISKELL 877


>gi|291228177|ref|XP_002734058.1| PREDICTED: ubiquitin specific peptidase 10-like [Saccoglossus
           kowalevskii]
          Length = 986

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 114/309 (36%), Positives = 175/309 (56%), Gaps = 25/309 (8%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG---YPTLTAFVGFVSD 255
           L PRGL N GN C++NATLQAL+SC P   LL+ L    + + G    P +     FV++
Sbjct: 602 LQPRGLNNVGNWCYINATLQALLSCPPMYNLLKSLPVTPLFRRGPSCTPMMDCLAHFVTE 661

Query: 256 FDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
           F         K+    L  G PF P+    +L      V +S+S + RQEDA+EFL F++
Sbjct: 662 FTPMPKAGGVKRTAQDLRPGAPFEPTYVYRLLAL----VKSSMSTKGRQEDAEEFLGFVL 717

Query: 316 DQMHDELLK-LQGESTS-INGANTALVSLAEEDEWET--------------VGPKNKSAV 359
           + +H+E+L  +QG++++ +NG ++A+ +    D   T              VGPKNKS++
Sbjct: 718 NGLHEEMLACMQGDASAKMNGPSSAVNANGPSDGEVTAVNNDDDDEEEWEQVGPKNKSSI 777

Query: 360 TRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
           TR  +F  S +S+IFGGQ++S V   G+K SAT+QPF  L LDI S+ + +++DAL+   
Sbjct: 778 TRAANFSKSPISEIFGGQMRSAVHQHGSKESATLQPFFTLQLDIQSDKIWSVKDALQSLV 837

Query: 420 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG-SQGSTKLHKSVRFPL 478
           + E L  Y TSS  N   V   + + ++ L  +L+LHL RF Y  S G  K+ K + + +
Sbjct: 838 SRETLHDY-TSSKPNKLEVETIRKISLEELPPVLVLHLKRFVYDKSGGCQKMTKKIDYSV 896

Query: 479 QLVLGRDLL 487
            L + ++LL
Sbjct: 897 DLEINKELL 905


>gi|410984097|ref|XP_003998368.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Felis catus]
          Length = 1051

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 118/323 (36%), Positives = 182/323 (56%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 516 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 571

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L      + +S+S 
Sbjct: 572 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 627

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG-------ESTSINGANTALVSLAE--------E 345
           + RQEDA+E+L FI++ +H+E+L L+        + T  NG  +  V   E        E
Sbjct: 628 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNQKLTVSNGPRSPSVHEDEQDEPGEGSE 687

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP++K++VTR   F+ + ++ IFGG ++SVV  Q ++ SAT+QPF  L LDI S
Sbjct: 688 DEWEQVGPRSKTSVTRQAEFVQTPITGIFGGHIRSVVYQQSSRESATLQPFFTLQLDIQS 747

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 748 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 804

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL KSV +P+ L + ++LL
Sbjct: 805 GGCQKLVKSVEYPVDLEISKELL 827


>gi|395748166|ref|XP_003778720.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 isoform 2
           [Pongo abelii]
          Length = 798

 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 179/323 (55%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 406 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 461

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L        +S+S 
Sbjct: 462 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 517

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E+L L+                ++ S+N           E
Sbjct: 518 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPKNPSVNEEEQEEQGEGSE 577

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 578 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 637

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 638 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 694

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 695 GGCQKLIKNIEYPVDLEISKELL 717


>gi|31873306|emb|CAD97644.1| hypothetical protein [Homo sapiens]
          Length = 824

 Score =  187 bits (476), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 179/323 (55%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 432 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 487

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L        +S+S 
Sbjct: 488 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 543

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E+L L+                ++ S+N           E
Sbjct: 544 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 603

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 604 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 663

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 664 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 720

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 721 GGCQKLIKNIEYPVDLEISKELL 743


>gi|11360280|pir||T47164 hypothetical protein DKFZp762E1712.1 - human (fragment)
          Length = 825

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 179/323 (55%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 433 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 488

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L        +S+S 
Sbjct: 489 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 544

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E+L L+                ++ S+N           E
Sbjct: 545 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 604

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 605 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 664

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 665 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 721

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 722 GGCQKLIKNIEYPVDLEISKELL 744


>gi|297699363|ref|XP_002826757.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 isoform 1
           [Pongo abelii]
          Length = 802

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 179/323 (55%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 410 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 465

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L        +S+S 
Sbjct: 466 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 521

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E+L L+                ++ S+N           E
Sbjct: 522 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPKNPSVNEEEQEEQGEGSE 581

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 582 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 641

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 642 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 698

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 699 GGCQKLIKNIEYPVDLEISKELL 721


>gi|410300628|gb|JAA28914.1| ubiquitin specific peptidase 10 [Pan troglodytes]
          Length = 803

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 179/323 (55%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 411 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 466

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L        +S+S 
Sbjct: 467 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 522

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E+L L+                ++ S+N           E
Sbjct: 523 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSSEKLTISNGPKNHSVNEEEQEEQGEGSE 582

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 583 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 642

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 643 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 699

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 700 GGCQKLIKNIEYPVDLEISKELL 722


>gi|332246808|ref|XP_003272544.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Nomascus
           leucogenys]
          Length = 821

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 179/323 (55%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 429 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 484

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L        +S+S 
Sbjct: 485 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 540

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E+L L+                ++ S+N           E
Sbjct: 541 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPKNHSVNEEEQEEQGEGSE 600

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 601 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 660

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 661 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 717

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 718 GGCQKLIKNIEYPVDLEISKELL 740


>gi|417412642|gb|JAA52698.1| Putative ubiquitin carboxyl-terminal hydrolase 10, partial
           [Desmodus rotundus]
          Length = 772

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 116/323 (35%), Positives = 182/323 (56%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++ +        P    P 
Sbjct: 380 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKAQRPCTSTPM 435

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L      + +S+S 
Sbjct: 436 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 491

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAEE-------- 345
           + RQEDA+E+L FI++ +H+E+L L+       E  +I NG  + + +  E+        
Sbjct: 492 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPKSHVENEEEQEEPGEGSE 551

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 552 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 611

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 612 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 668

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 669 GGCQKLIKNIEYPVDLEISKELL 691


>gi|60812207|gb|AAX36202.1| ubiquitin specific protease 10 [synthetic construct]
          Length = 799

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 179/323 (55%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 406 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 461

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L        +S+S 
Sbjct: 462 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 517

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E+L L+                ++ S+N           E
Sbjct: 518 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 577

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 578 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 637

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 638 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 694

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 695 GGCQKLIKNIEYPVDLEISKELL 717


>gi|410213036|gb|JAA03737.1| ubiquitin specific peptidase 10 [Pan troglodytes]
 gi|410331583|gb|JAA34738.1| ubiquitin specific peptidase 10 [Pan troglodytes]
          Length = 803

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 179/323 (55%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 411 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 466

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L        +S+S 
Sbjct: 467 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 522

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E+L L+                ++ S+N           E
Sbjct: 523 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSSEKLTISNGPKNHSVNEEEQEEQGEGSE 582

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 583 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 642

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 643 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 699

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 700 GGCQKLIKNIEYPVDLEISKELL 722


>gi|1136438|dbj|BAA11507.1| KIAA0190 [Homo sapiens]
          Length = 813

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 179/323 (55%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 421 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 476

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L        +S+S 
Sbjct: 477 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 532

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E+L L+                ++ S+N           E
Sbjct: 533 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 592

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 593 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 652

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 653 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 709

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 710 GGCQKLIKNIEYPVDLEISKELL 732


>gi|410249260|gb|JAA12597.1| ubiquitin specific peptidase 10 [Pan troglodytes]
          Length = 803

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 179/323 (55%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 411 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 466

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L        +S+S 
Sbjct: 467 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 522

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E+L L+                ++ S+N           E
Sbjct: 523 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSSEKLTISNGPKNHSVNEEEQEEQGEGSE 582

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 583 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 642

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 643 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 699

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 700 GGCQKLIKNIEYPVDLEISKELL 722


>gi|168274448|dbj|BAG09644.1| ubiquitin carboxyl-terminal hydrolase 10 [synthetic construct]
          Length = 803

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 179/323 (55%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 411 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 466

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L        +S+S 
Sbjct: 467 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 522

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E+L L+                ++ S+N           E
Sbjct: 523 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 582

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 583 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 642

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 643 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 699

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 700 GGCQKLIKNIEYPVDLEISKELL 722


>gi|119220605|ref|NP_005144.2| ubiquitin carboxyl-terminal hydrolase 10 isoform 2 [Homo sapiens]
 gi|2501458|sp|Q14694.2|UBP10_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 10; AltName:
           Full=Deubiquitinating enzyme 10; AltName: Full=Ubiquitin
           thioesterase 10; AltName:
           Full=Ubiquitin-specific-processing protease 10
 gi|189054961|dbj|BAG37945.1| unnamed protein product [Homo sapiens]
          Length = 798

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 179/323 (55%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 406 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 461

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L        +S+S 
Sbjct: 462 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 517

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E+L L+                ++ S+N           E
Sbjct: 518 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 577

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 578 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 637

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 638 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 694

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 695 GGCQKLIKNIEYPVDLEISKELL 717


>gi|12653005|gb|AAH00263.1| Ubiquitin specific peptidase 10 [Homo sapiens]
 gi|61364925|gb|AAX42626.1| ubiquitin specific protease 10 [synthetic construct]
 gi|123983753|gb|ABM83479.1| ubiquitin specific peptidase 10 [synthetic construct]
 gi|123998177|gb|ABM86690.1| ubiquitin specific peptidase 10 [synthetic construct]
          Length = 798

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 179/323 (55%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 406 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 461

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L        +S+S 
Sbjct: 462 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 517

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E+L L+                ++ S+N           E
Sbjct: 518 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 577

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 578 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 637

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 638 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 694

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 695 GGCQKLIKNIEYPVDLEISKELL 717


>gi|52545651|emb|CAB82392.2| hypothetical protein [Homo sapiens]
          Length = 798

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 179/323 (55%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 406 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 461

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L        +S+S 
Sbjct: 462 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 517

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E+L L+                ++ S+N           E
Sbjct: 518 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 577

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 578 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 637

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 638 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 694

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 695 GGCQKLIKNIEYPVDLEISKELL 717


>gi|119615877|gb|EAW95471.1| ubiquitin specific peptidase 10, isoform CRA_b [Homo sapiens]
          Length = 897

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 179/323 (55%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 505 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 560

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L        +S+S 
Sbjct: 561 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 616

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E+L L+                ++ S+N           E
Sbjct: 617 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 676

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 677 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 736

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 737 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 793

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 794 GGCQKLIKNIEYPVDLEISKELL 816


>gi|426383094|ref|XP_004058127.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Gorilla
           gorilla gorilla]
          Length = 804

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 179/323 (55%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 412 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 467

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L        +S+S 
Sbjct: 468 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 523

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E+L L+                ++ S+N           E
Sbjct: 524 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 583

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 584 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 643

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 644 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 700

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 701 GGCQKLIKNIEYPVDLEISKELL 723


>gi|194389058|dbj|BAG61546.1| unnamed protein product [Homo sapiens]
          Length = 802

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 179/323 (55%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 410 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 465

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L        +S+S 
Sbjct: 466 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 521

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E+L L+                ++ S+N           E
Sbjct: 522 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 581

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 582 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 641

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 642 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 698

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 699 GGCQKLIKNIEYPVDLEISKELL 721


>gi|440918695|ref|NP_001259004.1| ubiquitin carboxyl-terminal hydrolase 10 isoform 1 [Homo sapiens]
          Length = 802

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 179/323 (55%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 410 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 465

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L        +S+S 
Sbjct: 466 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 521

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E+L L+                ++ S+N           E
Sbjct: 522 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 581

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 582 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 641

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 642 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 698

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 699 GGCQKLIKNIEYPVDLEISKELL 721


>gi|449472364|ref|XP_002194358.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Taeniopygia
           guttata]
          Length = 792

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/327 (35%), Positives = 180/327 (55%), Gaps = 36/327 (11%)

Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAG 242
           ++ I++PV     L PRGLIN GN C++NATLQAL++C P   L++ +        P   
Sbjct: 396 VRLIHKPV----SLQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPMYSKSQRPCTS 451

Query: 243 YPTLTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNS 297
            P L +FV  +++F     P        +  V DI  G  F P+    +L      + +S
Sbjct: 452 TPMLDSFVRLMNEFTNMPVPPKAKQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSS 507

Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALV---------S 341
           +S + RQEDA+E+L FI++ +H+E+L L+       E  S+ NG     V          
Sbjct: 508 LSEKGRQEDAEEYLGFILNGLHEEMLTLKKLLSPHNEKVSVSNGPEAQSVPKEEEQEEQG 567

Query: 342 LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHL 401
              EDEWE VGP+NKS+VTR   F+ + ++DIFGG ++SVV  Q +K SAT+Q F  L L
Sbjct: 568 EGSEDEWEQVGPRNKSSVTRQADFVQTPITDIFGGHIRSVVYQQSSKESATLQLFFTLQL 627

Query: 402 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 461
           DI S+ + T++DAL    A E+++GY T +      V   + + ++ L  +L+LHL RF 
Sbjct: 628 DIQSDKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRLTLEKLPPVLVLHLKRFV 684

Query: 462 Y-GSQGSTKLHKSVRFPLQLVLGRDLL 487
           Y  + G  KL K++ + + L + ++LL
Sbjct: 685 YEKTGGCQKLIKNIEYTVDLEISKELL 711


>gi|397500409|ref|XP_003820908.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Pan paniscus]
          Length = 802

 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/323 (35%), Positives = 179/323 (55%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 410 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 465

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  + DI  G  F P+    +L        +S+S 
Sbjct: 466 IDSFVRLMNEFTNMPVPPKPRQALGDKIMRDIRPGAAFEPTYIYRLLTVNK----SSLSE 521

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E+L L+                ++ S+N           E
Sbjct: 522 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSSEKLTISNGPKNHSVNEEEQEEQGEGSE 581

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 582 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 641

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 642 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 698

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 699 GGCQKLIKNIEYPVDLEISKELL 721


>gi|380785811|gb|AFE64781.1| ubiquitin carboxyl-terminal hydrolase 10 [Macaca mulatta]
 gi|383411655|gb|AFH29041.1| ubiquitin carboxyl-terminal hydrolase 10 [Macaca mulatta]
 gi|384942978|gb|AFI35094.1| ubiquitin carboxyl-terminal hydrolase 10 [Macaca mulatta]
          Length = 798

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/323 (36%), Positives = 182/323 (56%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 406 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 461

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L        +S+S 
Sbjct: 462 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 517

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAEE-------- 345
           + RQEDA+E+L FI++ +H+E+L L+       E  +I NG     V+  E+        
Sbjct: 518 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPKNHSVTEEEQEEQGEGSE 577

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 578 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 637

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 638 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 694

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 695 GGCQKLIKNIEYPVDLEISKELL 717


>gi|297284590|ref|XP_001111197.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Macaca
           mulatta]
          Length = 802

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/323 (36%), Positives = 182/323 (56%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 410 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 465

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L        +S+S 
Sbjct: 466 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 521

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAEE-------- 345
           + RQEDA+E+L FI++ +H+E+L L+       E  +I NG     V+  E+        
Sbjct: 522 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPKNHSVTEEEQEEQGEGSE 581

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 582 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 641

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 642 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 698

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 699 GGCQKLIKNIEYPVDLEISKELL 721


>gi|395836805|ref|XP_003791338.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Otolemur
           garnettii]
          Length = 798

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 118/323 (36%), Positives = 181/323 (56%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 406 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 461

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L        +S+S 
Sbjct: 462 IDSFVRLMNEFTNMPVPPKPRQALGDKVVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 517

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALV--------SLAEE 345
           + RQEDA+E+L FI++ +H+E+L L+       E   I NG  + L+            E
Sbjct: 518 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLMISNGPKSHLLDEYEQEEQGEGSE 577

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 578 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 637

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 638 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 694

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 695 GGCQKLIKNIDYPVDLEISKELL 717


>gi|156549252|ref|XP_001599382.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like isoform 1
           [Nasonia vitripennis]
          Length = 933

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/311 (36%), Positives = 164/311 (52%), Gaps = 23/311 (7%)

Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPT--LTAFVG 251
           K    LLPRGL N  N C++N+ LQAL++C PF  LL  L     P    P+  +   + 
Sbjct: 537 KQTVSLLPRGLTNRSNYCYINSILQALLACPPFYNLLMALPHSRNPSKHSPSPLIDNMIK 596

Query: 252 FVSDFDTPSGGS--------SKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISGR 301
           F  +F   S G+         K+   +V+DI  G PF PS    +LKN +     S+ GR
Sbjct: 597 FAREFTPLSEGARLARKDRAQKRNEDAVVDIQSGVPFEPSYIYTILKNTSSSGVFSVEGR 656

Query: 302 PRQEDAQEFLSFIMDQMHDELLKL-----QGESTSINGANTALVSLAEEDEWETVGPKNK 356
             QEDA+EFLS +++ + DE+L+L       +  S+   + ++     E+EW+ +GPKNK
Sbjct: 657 --QEDAEEFLSCLLNGISDEMLELMKLANNNDQKSVECIDNSVNYSQGEEEWKVMGPKNK 714

Query: 357 SAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALR 416
            ++TR+  F  + LSDIF GQL+S V     +A+  VQPF  L LDI  E   ++  AL 
Sbjct: 715 GSITRSTDFGRTPLSDIFRGQLRSRVSRATEQATDYVQPFFTLQLDI--EKAESVRTALE 772

Query: 417 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRF 476
           +    + LEG   S T     + A K V ++ L  ILILHL  F Y   G +K+ KSV F
Sbjct: 773 ILVGKDQLEGMTCSKTKQQ--IEAWKQVTLEELPVILILHLKWFDYNPDGCSKIVKSVEF 830

Query: 477 PLQLVLGRDLL 487
           P+ L +   L+
Sbjct: 831 PIDLKIDNKLM 841


>gi|345487504|ref|XP_003425704.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like isoform 2
           [Nasonia vitripennis]
          Length = 936

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/311 (36%), Positives = 164/311 (52%), Gaps = 23/311 (7%)

Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPT--LTAFVG 251
           K    LLPRGL N  N C++N+ LQAL++C PF  LL  L     P    P+  +   + 
Sbjct: 540 KQTVSLLPRGLTNRSNYCYINSILQALLACPPFYNLLMALPHSRNPSKHSPSPLIDNMIK 599

Query: 252 FVSDFDTPSGGS--------SKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISGR 301
           F  +F   S G+         K+   +V+DI  G PF PS    +LKN +     S+ GR
Sbjct: 600 FAREFTPLSEGARLARKDRAQKRNEDAVVDIQSGVPFEPSYIYTILKNTSSSGVFSVEGR 659

Query: 302 PRQEDAQEFLSFIMDQMHDELLKL-----QGESTSINGANTALVSLAEEDEWETVGPKNK 356
             QEDA+EFLS +++ + DE+L+L       +  S+   + ++     E+EW+ +GPKNK
Sbjct: 660 --QEDAEEFLSCLLNGISDEMLELMKLANNNDQKSVECIDNSVNYSQGEEEWKVMGPKNK 717

Query: 357 SAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALR 416
            ++TR+  F  + LSDIF GQL+S V     +A+  VQPF  L LDI  E   ++  AL 
Sbjct: 718 GSITRSTDFGRTPLSDIFRGQLRSRVSRATEQATDYVQPFFTLQLDI--EKAESVRTALE 775

Query: 417 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRF 476
           +    + LEG   S T     + A K V ++ L  ILILHL  F Y   G +K+ KSV F
Sbjct: 776 ILVGKDQLEGMTCSKTKQQ--IEAWKQVTLEELPVILILHLKWFDYNPDGCSKIVKSVEF 833

Query: 477 PLQLVLGRDLL 487
           P+ L +   L+
Sbjct: 834 PIDLKIDNKLM 844


>gi|332846499|ref|XP_511147.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Pan
           troglodytes]
          Length = 780

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/320 (35%), Positives = 176/320 (55%), Gaps = 35/320 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 410 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 465

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L        +S+S 
Sbjct: 466 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 521

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E+L L+                ++ S+N           E
Sbjct: 522 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSSEKLTISNGPKNHSVNEEEQEEQGEGSE 581

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 582 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 641

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 642 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 698

Query: 465 QGSTKLHKSVRFPLQLVLGR 484
            G  KL K++ +P+ L + +
Sbjct: 699 GGCQKLIKNIEYPVDLEISK 718


>gi|390477989|ref|XP_002761263.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Callithrix
           jacchus]
          Length = 918

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/323 (34%), Positives = 175/323 (54%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++ +        P    P 
Sbjct: 526 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPLYSKVQRPCTSTPM 581

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +    DI  G  F P+    +L        +S+S 
Sbjct: 582 IDSFVRLMNEFTNMPVPPKPRQALGDKMARDIRPGAAFEPTYIYRLLTVNK----SSLSE 637

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E++ L+                ++ S+            E
Sbjct: 638 KGRQEDAEEYLGFILNGLHEEMVNLKKLLSPNNDKLKISNGPKNHSVREEEQEEQGEGSE 697

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 698 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 757

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 758 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 814

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 815 GGCQKLIKNIEYPVDLEISKELL 837


>gi|403260840|ref|XP_003922859.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Saimiri
           boliviensis boliviensis]
          Length = 802

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/323 (34%), Positives = 177/323 (54%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 410 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 465

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +    DI  G  F P+    +L        +S+S 
Sbjct: 466 IDSFVRLMNEFTNMPVPPKPRQALGDKMARDIRPGAAFEPTYIYRLLTVNK----SSLSE 521

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E++ L+                ++ S+            E
Sbjct: 522 KGRQEDAEEYLGFILNGLHEEMVNLKKLLSPNNEKLTISNGPKNHSVREEEQEEQGEGSE 581

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 582 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 641

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 642 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 698

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 699 GGCQKLIKNIEYPVDLEISKELL 721


>gi|348509749|ref|XP_003442409.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like
           [Oreochromis niloticus]
          Length = 859

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/330 (34%), Positives = 186/330 (56%), Gaps = 41/330 (12%)

Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD---IPKAG 242
           +K I++PV     L PRGLIN GN C++NATLQAL++C P   L++ +   +    P   
Sbjct: 462 VKLIHKPVS----LQPRGLINKGNWCYINATLQALIACPPMYHLMKSIPLHNETQRPCTS 517

Query: 243 YPTLTAFVGFVSDFDT-PSGGSSKKKNIS---VLDI--GRPFSPSMFEAVLKNFTPDVPN 296
            P +  FV  V++F+  P    +K++ +      DI  G PF P+    +L      + +
Sbjct: 518 TPMIDNFVRLVNEFNNMPVPSKAKQQAVGDKVTKDIRPGAPFEPTYIYKLLTL----IKS 573

Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELLKL-------QGESTSINGANTALVSLAEEDEWE 349
           S+S + RQEDA+E+L F ++ +H+E+L L       + ++ + NG  +      EED  +
Sbjct: 574 SLSEKGRQEDAEEYLGFTLNGLHEEMLALKKLISPQEEKAPTPNGPESE--PGVEEDGAD 631

Query: 350 -----------TVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLL 398
                       VGP+NK+++TR   F+ + ++DIFGG ++SVV  Q +K SAT+QPF  
Sbjct: 632 KEEEGSEDEWEQVGPRNKTSITRQADFVRTPITDIFGGHIRSVVYQQNSKESATLQPFFT 691

Query: 399 LHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLM 458
           L LDI S+ + T+++AL    A E+++GY TS T     +   + V ++ L  +L+LHL 
Sbjct: 692 LQLDIQSDKIRTVQEALETLVARESVQGY-TSKTKQE--IEISRRVTLEELPPVLVLHLK 748

Query: 459 RFSY-GSQGSTKLHKSVRFPLQLVLGRDLL 487
           RF +  S G  KL K++ +P+ L + +DLL
Sbjct: 749 RFVFEKSGGCQKLTKNIDYPVDLEISKDLL 778


>gi|156382482|ref|XP_001632582.1| predicted protein [Nematostella vectensis]
 gi|156219640|gb|EDO40519.1| predicted protein [Nematostella vectensis]
          Length = 412

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/331 (35%), Positives = 174/331 (52%), Gaps = 52/331 (15%)

Query: 197 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF 256
           K LL RGL+N  N C++NATLQAL+ C PF  L++++    IP+    T T  +      
Sbjct: 12  KPLLLRGLVNKANWCYINATLQALLVCPPFFNLMRQVEL--IPEREASTSTPIL------ 63

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD--------------------VPN 296
           D+    ++      V+  G  + P++  +     TP                     + +
Sbjct: 64  DSIPLVTTNINPCMVVIFGNLYCPALLFSANTGKTPKSDFRTGPNLEPSYIGKMLATIES 123

Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELLKL----------------QGESTSINGANTALV 340
           ++S +  QEDA+EFLS +++ +H+E++ L                +G    +N       
Sbjct: 124 TLSAKGHQEDAEEFLSCLLNGIHEEMIVLSKLDPPLPKPESHESSEGVQDDLNIVAVEGQ 183

Query: 341 SLAEEDE----WETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPF 396
           ++ +E+E    WE VGP+NKS++TR  SF  S +SDIFGG L+S V   G K SA V+PF
Sbjct: 184 TMDKEEEDAGDWEQVGPRNKSSITRVASFPSSLISDIFGGCLRSSVHQTGAKESANVEPF 243

Query: 397 LLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILH 456
             L LDI  + V  IEDAL   +  E L+G+  S T NA +  +++ V  + L K+LILH
Sbjct: 244 FCLQLDI--QNVSCIEDALNHLTVKEELQGFTCSKT-NAQIDVSRR-VSFEVLPKVLILH 299

Query: 457 LMRFSYGSQGSTKLHKSVRFPLQLVLGRDLL 487
           L RF Y   GS KL K V +PL+LV+GR+LL
Sbjct: 300 LKRFIYSKNGSQKLQKHVDYPLELVIGRELL 330


>gi|355710448|gb|EHH31912.1| hypothetical protein EGK_13069, partial [Macaca mulatta]
          Length = 792

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/323 (35%), Positives = 181/323 (56%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PR LI+ GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 400 IHKPVS----LQPRELISKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 455

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L        +S+S 
Sbjct: 456 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 511

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAEE-------- 345
           + RQEDA+E+L FI++ +H+E+L L+       E  +I NG     V+  E+        
Sbjct: 512 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPKNHSVTEEEQEEQGEGSE 571

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 572 DEWEQVGPRNKTSVTRQAEFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 631

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 632 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 688

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 689 GGCQKLIKNIEYPVDLEISKELL 711


>gi|70991228|ref|XP_750463.1| ubiquitin C-terminal hydrolase [Aspergillus fumigatus Af293]
 gi|66848095|gb|EAL88425.1| ubiquitin C-terminal hydrolase, putative [Aspergillus fumigatus
           Af293]
 gi|159130936|gb|EDP56049.1| ubiquitin C-terminal hydrolase, putative [Aspergillus fumigatus
           A1163]
          Length = 872

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/309 (35%), Positives = 175/309 (56%), Gaps = 26/309 (8%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
           L PRGLIN+GN+C++N+ LQ L+SC PF Q L  +  R     ++ +P + A + F+ +F
Sbjct: 403 LEPRGLINTGNMCYMNSVLQILVSCIPFYQFLDHVGRRISHSVQSAFPMVDAMIMFMKEF 462

Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTP--DVPNSISGRPRQEDAQ 308
                  S++      K   + D G  F+P     V++  +   D+      R  Q+DAQ
Sbjct: 463 RVIDAAPSEEQLRLRLKPNELEDYGEAFTPDFVYEVIRQLSRFRDM-----QRGHQQDAQ 517

Query: 309 EFLSFIMDQMHDELLKL-QGESTSINGANTALVSLAEEDE----WETVGPKNKSAVTRTQ 363
           EFL F++++MH+E ++  +  ST+   A+    S+ +E++    W  VG K K+A+TR+ 
Sbjct: 518 EFLGFLLEEMHEECVRAAKNASTTKPAASITAESIDKEEQSGDGWLEVGHKQKAAITRSS 577

Query: 364 SFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
             +   S ++ IFGG+++S  K  GNK S T++P+  L LDI S  +H I DAL+  + P
Sbjct: 578 GHITQESPITRIFGGKIRSEFKVPGNKTSVTLEPYQPLQLDIGSPDIHNIVDALKGLTKP 637

Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQ 479
           E+++G   SS G    VTA K + I+ L  +LILHL RF Y S  +G+ K+ K + +PL 
Sbjct: 638 ESIQGDFNSSRGPN--VTATKQIFIENLPPVLILHLKRFQYDSVTRGTQKIWKKIGYPLD 695

Query: 480 LVLGRDLLV 488
           L + R++  
Sbjct: 696 LEIPREVFA 704


>gi|432852750|ref|XP_004067366.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like [Oryzias
           latipes]
          Length = 855

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/329 (36%), Positives = 184/329 (55%), Gaps = 40/329 (12%)

Query: 186 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK---AG 242
           +K +++PV     L PRGLIN GN C++NATLQAL++C P   L++ +   +  +     
Sbjct: 459 VKLMHKPVS----LQPRGLINKGNWCYINATLQALIACPPMYHLMKSITLHNETQRTCTS 514

Query: 243 YPTLTAFVGFVSDFDTPSGGSSKKKNIS----VLDI--GRPFSPSMFEAVLKNFTPDVPN 296
            P +  FV  V++F      S  K+  +      DI  G PF P+    +L      + +
Sbjct: 515 TPMIDNFVRLVNEFSNMPVPSKTKQQAAGEKVTKDIRPGVPFEPTYIYRLLTL----IKS 570

Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAEED---- 346
           S+S + RQEDA+E+L F ++ +H+E+L L      Q E+ + NG  +      EED    
Sbjct: 571 SLSEKGRQEDAEEYLGFTLNGLHEEMLALKKLISPQEETPTPNGPESQ--PGVEEDLPDK 628

Query: 347 -------EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLL 399
                  EWE VGP+NK ++TR   F+ + ++DIFGG ++SVV  Q +K SAT+QPF  L
Sbjct: 629 EEEESDDEWEQVGPRNKISITRQADFVRTPITDIFGGHIRSVVYQQNSKESATLQPFFTL 688

Query: 400 HLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMR 459
            LDI SE + T+++AL    A E+++GY TS T     +   + V ++ L  +L+LHL R
Sbjct: 689 QLDIQSEKIRTVQEALETLVARESVQGY-TSKTKQE--IEISRRVTLEELPPVLVLHLKR 745

Query: 460 FSY-GSQGSTKLHKSVRFPLQLVLGRDLL 487
           F +  + G  KL K+V +P+ L + +DLL
Sbjct: 746 FVFEKTGGCQKLTKNVDYPVDLEISKDLL 774


>gi|119496357|ref|XP_001264952.1| ubiquitin C-terminal hydrolase, putative [Neosartorya fischeri NRRL
           181]
 gi|119413114|gb|EAW23055.1| ubiquitin C-terminal hydrolase, putative [Neosartorya fischeri NRRL
           181]
          Length = 863

 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/309 (35%), Positives = 176/309 (56%), Gaps = 26/309 (8%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
           L PRGLIN+GN+C++N+ LQ L+SC PF Q L  +  R     ++ +P + A + F+ +F
Sbjct: 394 LEPRGLINTGNMCYMNSVLQILVSCIPFYQFLDHVGRRASHSVQSAFPMVDAMIMFMKEF 453

Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTP--DVPNSISGRPRQEDAQ 308
                  S++      K   + + G  F+P     V++  +   D+      R  Q+DAQ
Sbjct: 454 RVIDAAPSEEQLRLRLKPNELEEYGEAFTPDFVYEVIRQLSRFRDM-----QRGHQQDAQ 508

Query: 309 EFLSFIMDQMHDELLKL-QGESTSINGANTALVSLAEEDE----WETVGPKNKSAVTRTQ 363
           EFL F++++MH+E ++  +  ST+   A+T   S+ +E++    W  VG K K+AVTR+ 
Sbjct: 509 EFLGFLLEEMHEECVRAAKNASTTKPAASTTAESIDKEEQSGDGWLEVGHKQKAAVTRSS 568

Query: 364 SFLP--SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
             +   S ++ IFGG+++S  K  GNK S T++P+  L LDI S  ++ I DAL+  + P
Sbjct: 569 GHIAQESPITRIFGGKIRSEFKVPGNKTSVTLEPYQPLQLDIGSPDINNIVDALKGLTKP 628

Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQ 479
           E+++G   SS G    VTA K + I+ L  +LILHL RF Y S  +G+ K+ K + +PL 
Sbjct: 629 ESIQGDFNSSRGPN--VTATKQIFIENLPPVLILHLKRFQYDSVTRGTQKIWKKIGYPLD 686

Query: 480 LVLGRDLLV 488
           L + R++  
Sbjct: 687 LEIPREVFA 695


>gi|452837008|gb|EME38951.1| hypothetical protein DOTSEDRAFT_75600 [Dothistroma septosporum
           NZE10]
          Length = 897

 Score =  177 bits (450), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 110/310 (35%), Positives = 172/310 (55%), Gaps = 30/310 (9%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L+ C PF   L ++R R +   K+  P + A + FV +F
Sbjct: 433 LEPRGLVNTGNMCYMNSILQVLVFCVPFYSFLDQVRQRTVHSLKSDTPLVDAMIMFVREF 492

Query: 257 D----TPSGGSSKK--KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISG--RPRQEDAQ 308
                 P+  + +   K   +   G P +P     V++          +G  R  Q+DA+
Sbjct: 493 KILARAPTADTLRPVLKQEQLEQYGEPCTPEYVYEVIQRLP-----RFAGMRRGHQQDAE 547

Query: 309 EFLSFIMDQMHDELLK-LQGESTS------INGANTALVSLAEEDEWETVGPKNKSAVTR 361
           EFL F+++ +HDE +K +QG++ +      I+   +   + A +D W  VGPK K+A TR
Sbjct: 548 EFLGFLLEGLHDECVKVMQGQTDTHRQQIGISCPGSVASATAADDGWLEVGPKQKAAETR 607

Query: 362 T--QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
           T  Q   P+ ++ IFGG L+S ++  G K S T++P+  L LDI ++ V+ I DAL+  +
Sbjct: 608 TAGQQDAPTPITKIFGGHLRSELRVPGKKDSVTLEPYKPLQLDIGAQNVNNIIDALKGLT 667

Query: 420 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPL 478
            PE  EG      GN    TAKK V I+TL  +L+LHL RF Y S G T K+ K + +PL
Sbjct: 668 IPEAFEG-DFGGRGN----TAKKQVFIETLPPVLVLHLKRFQYDSSGGTQKIWKKIGYPL 722

Query: 479 QLVLGRDLLV 488
            L + +++  
Sbjct: 723 DLEIPKEVFA 732


>gi|291414098|ref|XP_002723302.1| PREDICTED: ubiquitin specific protease 10 [Oryctolagus cuniculus]
          Length = 790

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/322 (36%), Positives = 180/322 (55%), Gaps = 34/322 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++ L        P    P 
Sbjct: 399 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFLPLYSKAQRPCTSTPM 454

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L      + +S+S 
Sbjct: 455 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 510

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANT-------ALVSLAEED 346
           + RQEDA+E+L FI++ +H+E+L L+      GE  +I NG  +              E+
Sbjct: 511 KGRQEDAEEYLGFILNGLHEEMLGLKKLLAAHGEQLAIPNGPRSRPGTQEQEEEGEGSEE 570

Query: 347 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSE 406
           EWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S+
Sbjct: 571 EWEQVGPRNKTSVTRQADFVQTPITCIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSD 630

Query: 407 AVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQ 465
            + T++DAL    A E+++GY T S      V   + V ++ L  +L+LHL RF Y  + 
Sbjct: 631 KIRTVQDALESLVARESVQGYTTKSKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKTG 687

Query: 466 GSTKLHKSVRFPLQLVLGRDLL 487
           G  KL K++ +P+ L + ++LL
Sbjct: 688 GCQKLIKNIDYPVDLEISKELL 709


>gi|431838529|gb|ELK00461.1| Ubiquitin carboxyl-terminal hydrolase 10, partial [Pteropus alecto]
          Length = 797

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/323 (35%), Positives = 180/323 (55%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 405 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 460

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L      + +S+S 
Sbjct: 461 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLAV----IKSSLSE 516

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E+L L+                ++ S+N           E
Sbjct: 517 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPKNHSVNEEEQEEPGEGSE 576

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           +EWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 577 EEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 636

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 637 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 693

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 694 GGCQKLIKNIEYPVDLEISKELL 716


>gi|350408371|ref|XP_003488381.1| PREDICTED: hypothetical protein LOC100746491 [Bombus impatiens]
          Length = 928

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/315 (36%), Positives = 167/315 (53%), Gaps = 23/315 (7%)

Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL-RTRDIPK-AGYPTLTAFVG 251
           K    LLPRGL N  N C++N+ LQAL++C PF  LL  L  ++   K +  P +   + 
Sbjct: 533 KQTVSLLPRGLTNRSNYCYINSILQALLACPPFYNLLMALPHSKSSNKMSSTPLIDNMIK 592

Query: 252 FVSDFDTPSGGS--------SKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISGR 301
           FV +F   S G+        +K+   S++DI  G  F P     +LKN +     S+ GR
Sbjct: 593 FVHEFTPLSDGARLARKDRANKRGEDSIVDIQSGVAFEPFYVYTMLKNTSAAGVFSVEGR 652

Query: 302 PRQEDAQEFLSFIMDQMHDELLKL----QGESTSINGANTALVSLAEEDEWETVGPKNKS 357
             QEDA+EFLS +++ ++DE+L+L      +    N     +     E+EW+ +GPKNK 
Sbjct: 653 --QEDAEEFLSCLLNGINDEMLELIKLVNNDQNVTNNIENNISYNNGEEEWKVMGPKNKG 710

Query: 358 AVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 417
           ++TR   F  + LSDIF GQL+S V   G + +  VQPF  L LDI  E   +++ AL +
Sbjct: 711 SITRCTEFGRTPLSDIFRGQLRSRVSRAGEQPTDNVQPFFTLQLDI--EKAESVKGALEI 768

Query: 418 FSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 477
               + LEG   S T     + A K V ++ L  ILILHL  F Y   G +K+ KSV FP
Sbjct: 769 LVGKDQLEGMTCSKTKQQ--IEAWKQVTLEELPVILILHLKWFDYKLDGCSKIVKSVEFP 826

Query: 478 LQLVLGRDLLVTPSA 492
           + L L    L +P+A
Sbjct: 827 IDLKLDSKFL-SPNA 840


>gi|390352547|ref|XP_794239.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-B-like
           [Strongylocentrotus purpuratus]
          Length = 823

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/319 (34%), Positives = 177/319 (55%), Gaps = 40/319 (12%)

Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK--AGYPTLTAFVGFVSD 255
           +L PRGLIN+ N C++N+ LQAL+SC PF  +++ +   +  +  +  P L A   F+ +
Sbjct: 429 NLQPRGLINTANWCYINSILQALLSCPPFYHIMRNMPLNNGVRKSSSTPMLDAMYKFLKE 488

Query: 256 FDTPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPN-SISGRP-RQEDAQEFL 311
           F    G S +    S LDI  G  F P++   +L      V N S+S +  RQEDA+EFL
Sbjct: 489 FQEMKGLSKR----SPLDIRTGTCFEPTVIYQMLS-----VANTSLSVKHGRQEDAEEFL 539

Query: 312 SFIMDQMHDELLKL---------QGESTSINGANTALVSLA-------------EEDEWE 349
           S +++ +HDE+  L         Q   +  NG  ++ V++A             ++DEWE
Sbjct: 540 SCLLNGLHDEMTSLIQLYNGEDVQANDSKQNGPASSSVAVANGDVGNGHPEEGSDDDEWE 599

Query: 350 TVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVH 409
            VGP+NK+++TR   F  S LS IFGG ++S +   G+K SAT+QPF  L LDI S+ + 
Sbjct: 600 QVGPRNKTSITRKAQFSSSPLSKIFGGIMRSALHQHGSKESATLQPFFSLQLDIQSQDIW 659

Query: 410 TIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG-SQGST 468
           +++ AL      E++ G+ ++ T     V A + + ++ L  +LILHL RF Y  S G  
Sbjct: 660 SVQHALDNLGNRESVHGFMSNKTKKE--VEAFRRITLEELPPVLILHLKRFLYDKSGGCQ 717

Query: 469 KLHKSVRFPLQLVLGRDLL 487
           KL K + + +++ + +DL+
Sbjct: 718 KLMKKIEYAMEIEINKDLI 736


>gi|425774704|gb|EKV13005.1| Ubiquitin carboxyl-terminal hydrolase [Penicillium digitatum PHI26]
 gi|425780801|gb|EKV18799.1| Ubiquitin carboxyl-terminal hydrolase [Penicillium digitatum Pd1]
          Length = 708

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/304 (36%), Positives = 168/304 (55%), Gaps = 29/304 (9%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L+SC+PF Q L  L  R      +  P +   + F+ +F
Sbjct: 255 LEPRGLVNTGNMCYMNSVLQILVSCTPFYQFLDHLGRRAAHTFHSDLPLIDGMIMFMKEF 314

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR--------QEDA 307
                 +S+ +      +     P+  E   ++F PD V   +   PR        Q+DA
Sbjct: 315 RVIDSATSEDQ------LRLRLKPNELEQYGESFVPDFVYEMVRQLPRFRDMRRGHQQDA 368

Query: 308 QEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP 367
           QEFL F++++MH+E  + +  + +    ++++      D W  VG K K+AVT+    L 
Sbjct: 369 QEFLGFLLEEMHEECARAESHTVAKESGDSSV------DGWLEVGHKQKAAVTQLSGSLA 422

Query: 368 --SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
             S ++ IFGG+L+S  K  GNK S T++P+  L LDI S  VH I DALR  + PE+++
Sbjct: 423 AESPVTRIFGGKLRSEFKVPGNKTSVTLEPYQPLQLDIGSHDVHNILDALRGMTKPESIQ 482

Query: 426 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS-QGST-KLHKSVRFPLQLVLG 483
           G   SS G    +TA K + I+TL  +LILHL RF Y S  G+T K+ K V +PL L L 
Sbjct: 483 GDFNSSRGPN--ITATKQIFIETLPPVLILHLKRFQYDSVTGATQKIWKKVGYPLDLELP 540

Query: 484 RDLL 487
           R++ 
Sbjct: 541 REVF 544


>gi|317137707|ref|XP_001727905.2| ubiquitin hydrolase [Aspergillus oryzae RIB40]
          Length = 870

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/312 (36%), Positives = 169/312 (54%), Gaps = 32/312 (10%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L+SC PF Q L  +  R     ++ +P + A + F+ +F
Sbjct: 404 LEPRGLVNTGNMCYMNSVLQILVSCVPFYQFLDHIGRRASHSFQSDFPMIDALIMFMKEF 463

Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
                  S++      K   +   G  F P     V++   P   +   G   Q+DAQEF
Sbjct: 464 RVIDAAHSEEQLRLRLKPNELEQYGDAFIPEFVYQVIRQL-PRFRDMRRGH--QQDAQEF 520

Query: 311 LSFIMDQMHDELLKL--QGESTSINGANTALVSLAEE---------DEWETVGPKNKSAV 359
           L F++++MH+E  +      ST  +GA     SL+EE         D W  VG K K AV
Sbjct: 521 LGFLLEEMHEECARAAKDAPSTKTDGA----ASLSEEPSAADDESGDGWLEVGHKQKPAV 576

Query: 360 TRTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 417
           TR+   +   S +  IFGGQ++S  K  GNK S T++P+  L LDI S  ++ I DAL+ 
Sbjct: 577 TRSSGHMSYESPIMRIFGGQIRSEFKVPGNKTSVTLEPYQPLQLDIGSPEINNIVDALKG 636

Query: 418 FSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVR 475
            + PE+++G   SS G    VTA K + I+ L  +LILHL RF Y S  +G+ K+ K V 
Sbjct: 637 LTKPESIQGDFNSSRGPN--VTATKQIFIENLPPVLILHLKRFQYDSVTRGTQKIWKKVG 694

Query: 476 FPLQLVLGRDLL 487
           +PL L + R++L
Sbjct: 695 YPLDLEIPREVL 706


>gi|391871138|gb|EIT80303.1| ubiquitin-specific protease [Aspergillus oryzae 3.042]
          Length = 878

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/312 (36%), Positives = 169/312 (54%), Gaps = 32/312 (10%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L+SC PF Q L  +  R     ++ +P + A + F+ +F
Sbjct: 412 LEPRGLVNTGNMCYMNSVLQILVSCVPFYQFLDHIGRRASHSFQSDFPMIDALIMFMKEF 471

Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
                  S++      K   +   G  F P     V++   P   +   G   Q+DAQEF
Sbjct: 472 RVIDAAHSEEQLSLRLKPNELEQYGDAFIPEFVYQVIRQL-PRFRDMRRGH--QQDAQEF 528

Query: 311 LSFIMDQMHDELLKL--QGESTSINGANTALVSLAEE---------DEWETVGPKNKSAV 359
           L F++++MH+E  +      ST  +GA     SL+EE         D W  VG K K AV
Sbjct: 529 LGFLLEEMHEECARAAKDAPSTKTDGA----ASLSEEPSAADDESGDGWLEVGHKQKPAV 584

Query: 360 TRTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 417
           TR+   +   S +  IFGGQ++S  K  GNK S T++P+  L LDI S  ++ I DAL+ 
Sbjct: 585 TRSSGHMSYESPIMRIFGGQIRSEFKVPGNKTSVTLEPYQPLQLDIGSPEINNIVDALKG 644

Query: 418 FSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVR 475
            + PE+++G   SS G    VTA K + I+ L  +LILHL RF Y S  +G+ K+ K V 
Sbjct: 645 LTKPESIQGDFNSSRGPN--VTATKQIFIENLPPVLILHLKRFQYDSVTRGTQKIWKKVG 702

Query: 476 FPLQLVLGRDLL 487
           +PL L + R++L
Sbjct: 703 YPLDLEIPREVL 714


>gi|380027295|ref|XP_003697363.1| PREDICTED: uncharacterized protein LOC100867068, partial [Apis
           florea]
          Length = 917

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 116/315 (36%), Positives = 167/315 (53%), Gaps = 23/315 (7%)

Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK--AGYPTLTAFVG 251
           K    LLPRGL N  N C++N+ LQAL++C PF  LL  L     P   +  P +   + 
Sbjct: 522 KQTVSLLPRGLTNRSNYCYINSILQALLACPPFYNLLMALPHSKNPSKMSSTPLIDNMIK 581

Query: 252 FVSDFDTPSGGS--------SKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISGR 301
           FV +F   S G+        +K+   +++DI  G  F P     +LKN +     S+ GR
Sbjct: 582 FVHEFTPLSDGARLARKDRANKRGEDTIVDIQSGVAFEPFYVYTMLKNTSAAGVFSVEGR 641

Query: 302 PRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAE-EDEWETVGPKNKS 357
             QEDA+EFLS +++ ++DE+L   KL     +I     + ++    E+EW+ +GPKNK 
Sbjct: 642 --QEDAEEFLSCLLNGINDEMLELIKLVNNDQNITSNIESNINYNNGEEEWKVMGPKNKG 699

Query: 358 AVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 417
           ++TR   F  + LSDIF GQL+S V   G + +  VQPF  L LDI  E   +++ AL +
Sbjct: 700 SITRCTEFGRTPLSDIFRGQLRSRVSRAGEQPTDNVQPFFTLQLDI--EKAESVKGALEI 757

Query: 418 FSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 477
               + LEG   S T     + A K V ++ L  ILILHL  F Y   G +K+ KSV FP
Sbjct: 758 LVGKDQLEGMTCSKTKQQ--IEAWKQVTLEELPVILILHLKWFDYKLDGCSKIVKSVEFP 815

Query: 478 LQLVLGRDLLVTPSA 492
           + L L    L +P+A
Sbjct: 816 IDLKLDSKFL-SPNA 829


>gi|157137881|ref|XP_001664058.1| hypothetical protein AaeL_AAEL003733 [Aedes aegypti]
 gi|108880727|gb|EAT44952.1| AAEL003733-PA [Aedes aegypti]
          Length = 1584

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 109/306 (35%), Positives = 167/306 (54%), Gaps = 26/306 (8%)

Query: 199  LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP-----KAGYPTLTAFVGFV 253
            +LPRGLIN  N C++NA LQAL++C PF  L++ +R+  +P     K   P + A    V
Sbjct: 1147 ILPRGLINRSNYCYINAILQALVACPPFYHLMRAIRS--LPAARNSKHQKPFIDAMSALV 1204

Query: 254  SDFDTPSGGS------SKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDA 307
             +F T    S      +KK     +    P  P M   +L     D+   + GR  QEDA
Sbjct: 1205 DEFSTLQLRSKVQRDKTKKDETPEIQCDSPMEPLMIHRMLNLLRSDI-FQVEGR--QEDA 1261

Query: 308  QEFLSFIMDQMHDE---LLKLQGESTSINGANTA--LVSLAEEDEWETV-GPKNKSAVTR 361
            +EFL  ++++++DE   L+KL    + +NG + A   V   ++D+W+ + G +NK  VTR
Sbjct: 1262 EEFLGCVLNRLNDEMIELMKLSKNESDVNGDDAANGEVHPDDQDDWKVIRGNRNKGTVTR 1321

Query: 362  TQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
            T  F  S +SDIFGG+L+S V  +G+ A+  +QPF  L LDI  E   +++DAL L    
Sbjct: 1322 TTDFGRSPMSDIFGGKLRSRVHREGDHATDNIQPFFTLQLDI--EKATSVKDALDLLVGK 1379

Query: 422  ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLV 481
            + LEG   S T     + A + V ++ L  ++ILHL  F Y   G TK+ K++ FP++L 
Sbjct: 1380 DQLEGVTCSKTKQE--IAAWQQVTLEELPIVMILHLKCFDYKMDGCTKILKALEFPIELK 1437

Query: 482  LGRDLL 487
            +   L+
Sbjct: 1438 IDSKLM 1443


>gi|351706494|gb|EHB09413.1| Ubiquitin carboxyl-terminal hydrolase 10, partial [Heterocephalus
           glaber]
          Length = 787

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 115/313 (36%), Positives = 178/313 (56%), Gaps = 31/313 (9%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPTLTAFVGFVSD 255
           L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P + +FV  +++
Sbjct: 401 LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFVRLMNE 460

Query: 256 FD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
           F     P        +  V DI  G  F P+    +L      + +S+S + RQEDA+E+
Sbjct: 461 FTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSEKGRQEDAEEY 516

Query: 311 LSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLA--------EEDEWETVGPKN 355
           L FI++ +H+E+L L+       E  ++ NG  + L   A         E+EWE VGP+N
Sbjct: 517 LGFILNGLHEEMLSLKRLLSPDSEKLTVSNGPRSPLPKDAAQQEQGEGSEEEWEQVGPRN 576

Query: 356 KSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDAL 415
           K++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S+ + T++DAL
Sbjct: 577 KTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDAL 636

Query: 416 RLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQGSTKLHKSV 474
               A E+++GY T +      V   + V ++ L  +L+LHL RF Y  + G  KL K++
Sbjct: 637 ESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLAKNI 693

Query: 475 RFPLQLVLGRDLL 487
            +P+ L + R+LL
Sbjct: 694 DYPVDLEISRELL 706


>gi|348550306|ref|XP_003460973.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like [Cavia
           porcellus]
          Length = 945

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 179/323 (55%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           +++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 553 VHKPV----SLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 608

Query: 246 LTAFVGFVSDF---DTPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L        +S+S 
Sbjct: 609 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVSK----SSLSE 664

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L F+++ +H+E+L L+                 S S +G      S   E
Sbjct: 665 KGRQEDAEEYLGFVLNGLHEEMLSLKKLLSPGSTKLLVSNGPRSPSADGEEQEAGSEGSE 724

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           +EWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 725 EEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 784

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 785 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 841

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + R+LL
Sbjct: 842 GGCQKLAKNIEYPVDLEISRELL 864


>gi|67538032|ref|XP_662790.1| hypothetical protein AN5186.2 [Aspergillus nidulans FGSC A4]
 gi|40743177|gb|EAA62367.1| hypothetical protein AN5186.2 [Aspergillus nidulans FGSC A4]
 gi|259484643|tpe|CBF81041.1| TPA: ubiquitin C-terminal hydrolase, putative (AFU_orthologue;
           AFUA_1G07160) [Aspergillus nidulans FGSC A4]
          Length = 840

 Score =  174 bits (441), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 107/302 (35%), Positives = 167/302 (55%), Gaps = 22/302 (7%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L+SC PF Q L  +  R      + +P + A + F+ +F
Sbjct: 385 LEPRGLVNTGNMCYMNSVLQILVSCVPFYQFLDHIGKRASHSFHSDFPMVDALIMFMKEF 444

Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
                  +++      K   +   G  F P     V++   P   +   G   Q+DAQEF
Sbjct: 445 RVIDAARNEEQLRMRLKANELEQYGEAFIPEFVYEVIRQL-PRFRDMRRGH--QQDAQEF 501

Query: 311 LSFIMDQMHDELLKLQGESTSINGANTALVSLAEE-DEWETVGPKNKSAVTRTQSFLPS- 368
           L F++++MH+E  +    +TS N +     + +E  D W  VG K K AVTR+   + S 
Sbjct: 502 LGFLLEEMHEECAR----ATSANSSTEPASTDSENGDGWLEVGHKQKPAVTRSSGHIASE 557

Query: 369 -ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY 427
             ++ IFGG+++S  +  GNKAS T++P+  L LDI +  +H I DAL+  + PE+++G 
Sbjct: 558 SPITKIFGGKIRSEFRVPGNKASVTLEPYQPLQLDIGAPEIHNIVDALKGLTKPESIQGD 617

Query: 428 RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVLGRD 485
             SS G    VTA K V I++L  +LILHL RF Y S   G+ K+ K + +PL L + R+
Sbjct: 618 FNSSRGPN--VTATKQVFIESLPPVLILHLKRFQYDSVTHGTQKIWKKIGYPLDLEIPRE 675

Query: 486 LL 487
           + 
Sbjct: 676 VF 677


>gi|255948676|ref|XP_002565105.1| Pc22g11580 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211592122|emb|CAP98446.1| Pc22g11580 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 833

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/304 (36%), Positives = 169/304 (55%), Gaps = 29/304 (9%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L+SC+PF Q L  L  R      +  P + A + F+ +F
Sbjct: 380 LEPRGLVNTGNMCYMNSVLQILVSCTPFYQFLDHLGRRAAHTFHSDLPLIDAMIMFMKEF 439

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR--------QEDA 307
                 +S+++      +     P+  E    +F P+ V   +   PR        Q+DA
Sbjct: 440 RVIDAATSEEQ------LRLRLKPNELEQYGDSFVPEFVYEMVRQLPRFRDMRRGHQQDA 493

Query: 308 QEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP 367
           QEFL F++++MH+E  + +  + +  G +++       D W  VG K K+AVT+    L 
Sbjct: 494 QEFLGFLLEEMHEECARAETHTATKEGGDSSA------DGWLEVGHKQKAAVTQLSGSLA 547

Query: 368 --SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
             S ++ IFGG+L+S  K  GNK S T++P+  L LDI S  VH I DAL+  + PE+++
Sbjct: 548 AESPVTRIFGGKLRSEFKVPGNKTSVTLEPYQPLQLDIGSHDVHNILDALKGMTKPESIQ 607

Query: 426 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS-QGST-KLHKSVRFPLQLVLG 483
           G   SS G    +TA K + I+TL  +LILHL RF Y S  G+T K+ K V +PL L L 
Sbjct: 608 GDFNSSRGPN--ITATKQIFIETLPPVLILHLKRFQYDSVTGATQKIWKKVGYPLDLELP 665

Query: 484 RDLL 487
           R++ 
Sbjct: 666 REVF 669


>gi|405971143|gb|EKC35997.1| Ubiquitin carboxyl-terminal hydrolase 10 [Crassostrea gigas]
          Length = 895

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/307 (35%), Positives = 171/307 (55%), Gaps = 27/307 (8%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG---YPTLTAFVGFVSD 255
           L PRGL+N GN C++NATLQAL+SC PF  ++++       + G    P + + V FV +
Sbjct: 517 LQPRGLMNRGNWCYINATLQALVSCPPFYNMMKKFPVNAPARKGKSSTPIMDSLVQFVHE 576

Query: 256 FDTPSGGSSK-KKNISVLDIGRPFSP----SMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
           F   +  + + +K ++ L  G  F P    +M + + +N +  +        +QEDA+EF
Sbjct: 577 FHPCARPTERGRKTLTELVPGAAFEPVNVYNMLQVIEENKSFKLG-------KQEDAEEF 629

Query: 311 LSFIMDQMHDE---LLKLQGESTSINGANTALVSLAEE------DEWETVGPKNKSAVTR 361
           LS+I+D +H+E   L+K    + ++NG  T  VSL E       D WE VGPK KS +TR
Sbjct: 630 LSYILDGLHEEMTTLIKFANGTPTVNGLTTDDVSLDESSEDVDPDSWEQVGPKKKSVLTR 689

Query: 362 TQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
             +F  + L++IF G  +S +    +K SAT+QPF  L LDI S+ VH++++A+    + 
Sbjct: 690 RANFEKTPLAEIFVGYTRSALYKANSKDSATLQPFFTLQLDIQSDKVHSVKEAMDGLVSR 749

Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ-GSTKLHKSVRFPLQL 480
           E++ G+  S T     V   + + ++ L  +LILHL  F Y    GS KL K+  + + L
Sbjct: 750 ESVSGFTCSKT--KAEVDVVRHLTLEELPPVLILHLKFFVYDKDGGSQKLLKNFEYGIDL 807

Query: 481 VLGRDLL 487
            + +DLL
Sbjct: 808 EITKDLL 814


>gi|440640781|gb|ELR10700.1| hypothetical protein GMDG_04961 [Geomyces destructans 20631-21]
          Length = 883

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/311 (35%), Positives = 177/311 (56%), Gaps = 27/311 (8%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L+ C PF +LL ++  R     K+  P + A + F+ +F
Sbjct: 420 LEPRGLVNTGNMCYMNSVLQVLVFCVPFYELLDQVGKRAAHSFKSDTPLIDAMIMFMREF 479

Query: 257 DT-PSGGSSKKKNISVLD-----IGRPFSPSMFEAVLKNFTPDVPNSIS-GRPRQEDAQE 309
               S  S +K  + + D      G  F+P     V++      P   S  R  Q+D +E
Sbjct: 480 PIIDSAVSVEKLRMRLKDNELEKYGDAFTPDFVYEVIRTL----PRFASMRRGHQQDTEE 535

Query: 310 FLSFIMDQMHDELLKLQGESTSINGA----NTALVSLAEE------DEWETVGPKNKSAV 359
           FL F+++ +HDE +++   ++S++G+    ++  VS A        + W  VGPK K+A+
Sbjct: 536 FLGFLLEGLHDECVQVMQSTSSVDGSPIVPSSPAVSQAGSVFGEGANGWLEVGPKQKAAI 595

Query: 360 TRTQ-SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLF 418
           TR+  + L S ++ IFGG L+SV++  G K S T++P+  L LDI+  +VH I DAL+  
Sbjct: 596 TRSSGTRLDSPITKIFGGTLRSVLRVPGLKDSVTMEPYQPLQLDIHLPSVHNIIDALKGL 655

Query: 419 SAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFP 477
           + PE + G   S  G+   VTA K V I+TL  +LILHL RF Y + G T K+ K V +P
Sbjct: 656 TKPETITGDFKSPRGSN--VTATKQVSIETLPPMLILHLKRFQYDNSGGTQKIWKKVGYP 713

Query: 478 LQLVLGRDLLV 488
           L+L + +++  
Sbjct: 714 LELEIPKEVFA 724


>gi|358368948|dbj|GAA85564.1| ubiquitin C-terminal hydrolase [Aspergillus kawachii IFO 4308]
          Length = 854

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/305 (35%), Positives = 168/305 (55%), Gaps = 21/305 (6%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L+SC PF Q L  +  R      + +P + A + F+ +F
Sbjct: 396 LQPRGLVNTGNMCYMNSVLQILVSCVPFYQFLDHIGRRASHSFNSDFPMIDALIMFMREF 455

Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
                  +++      K   + D G  F P     V++   P   +   G   Q+DAQEF
Sbjct: 456 RIIDAAHTEEQLKLRLKPNELEDYGEAFVPEFVYEVIRQL-PRFRDMRRGH--QQDAQEF 512

Query: 311 LSFIMDQMHDELLKL--QGESTSINGANTALVSLAEE--DEWETVGPKNKSAVTRTQSF- 365
           L F++++MH+E  +      +T+   AN       EE  D W  VG K K+AVTR+    
Sbjct: 513 LGFLLEEMHEECNRAAKDAPATTSASANPEAEVANEESGDGWLEVGHKQKAAVTRSSGHI 572

Query: 366 -LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 424
            L S ++ IFGG+++S  +  GNK S T++P+  L LDI +  ++ I DAL+  + PE++
Sbjct: 573 ALESPITKIFGGKIRSEFRVPGNKTSVTLEPYQPLQLDIGAPEINNIVDALKGLTKPESI 632

Query: 425 EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVL 482
           +G   SS G    VTA K + I+T+  +LILHL RF Y S  +G+ K+ K V +PL L +
Sbjct: 633 QGDFNSSRGPN--VTATKQIFIETMPPVLILHLKRFQYDSVTRGTQKIWKKVGYPLDLEI 690

Query: 483 GRDLL 487
            R++ 
Sbjct: 691 PREVF 695


>gi|296422375|ref|XP_002840736.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636959|emb|CAZ84927.1| unnamed protein product [Tuber melanosporum]
          Length = 709

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/301 (36%), Positives = 168/301 (55%), Gaps = 26/301 (8%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+CF+NA LQ L+ C PF   L  +        K   P + A + F+ +F
Sbjct: 305 LEPRGLLNTGNMCFMNAVLQMLVFCGPFYYFLDRVAKEAAHSFKNETPLIDAMIMFMREF 364

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISG--RPRQEDAQEFLSFI 314
              +  ++K++++  L  G PF+P     V++N       S +   R  Q+DA+EFL F+
Sbjct: 365 HA-TPMTAKQEDLDAL--GEPFAPEFLYEVIRNT-----KSFAHMRRGHQQDAEEFLGFL 416

Query: 315 MDQMHDELLKLQGES-----TSINGANTALVSLAEEDE--WETVGPKNKSAVTRTQSFLP 367
           +D +H+E +K+  +S     +SI+G +    SL + DE  W  VG K K+A TRT     
Sbjct: 417 LDGLHEEAVKMMMKSDGNGPSSISGDS----SLDDTDESGWMEVGHKQKTATTRTTEISE 472

Query: 368 SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY 427
           S ++ IFGG+L+SV      K S T++P+  L LDI +  V ++ DAL+  + PE ++G 
Sbjct: 473 SPITKIFGGKLRSVFHVPALKPSVTLEPYTPLQLDIQAPEVRSVVDALKHLTTPEKIQGD 532

Query: 428 RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQLVLGRDL 486
             S  G    V AKK V I+TL  +LILHL RF Y + G T K+ K + +PL L +  + 
Sbjct: 533 FKSPKGPN--VAAKKQVFIETLPPVLILHLKRFQYDNTGGTQKIWKKIGYPLVLQIPSEA 590

Query: 487 L 487
           +
Sbjct: 591 M 591


>gi|322802987|gb|EFZ23111.1| hypothetical protein SINV_02090 [Solenopsis invicta]
          Length = 933

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 115/317 (36%), Positives = 168/317 (52%), Gaps = 33/317 (10%)

Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK-----AGYPTLTA 248
           K    LLPRGL N  N C++N+ LQAL++C PF  LL  L    +PK     +  P +  
Sbjct: 537 KQTVSLLPRGLTNRSNYCYINSILQALLACPPFYNLLTAL---PLPKNRGRNSATPLIDN 593

Query: 249 FVGFVSDFD--TPSGGSSKKKNI------SVLDI--GRPFSPSMFEAVLKNFTPDVPNSI 298
            V FV +F   T +    +K  +      +V+DI  G  F PS    +LKN +     S+
Sbjct: 594 MVKFVREFSPLTEAARMPRKDRVHKRGEDTVMDIYSGIAFEPSYVYTMLKNASAAGAFSV 653

Query: 299 SGRPRQEDAQEFLSFIMDQMHDELLKL----QGESTSINGANTALVSLAEEDEWETVGPK 354
            GR  QEDA+EFLS +++ ++DE+L+L      +  +I+ A   + +  +E+EW+ +GPK
Sbjct: 654 EGR--QEDAEEFLSCLLNGINDEMLELIKLVSNDQNAISNAKN-VSNEHDEEEWQVMGPK 710

Query: 355 NKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDA 414
           NK AVTR   F  + LSDIF GQL+S V   G + +  VQPF  L LD+  +   ++  A
Sbjct: 711 NKGAVTRCTEFERTPLSDIFRGQLRSRVSRAGEQPTDNVQPFFTLQLDV--QKAESVRHA 768

Query: 415 LRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG----SQGSTKL 470
           L +    + +EG   S T     + A K V ++ L  ILILHL  F Y     S G +K+
Sbjct: 769 LEILVGKDQVEGLTCSKTRQQ--IEAWKQVTLEELPVILILHLKWFVYKFDKFSNGCSKI 826

Query: 471 HKSVRFPLQLVLGRDLL 487
            K+V FP+ L +    L
Sbjct: 827 LKTVEFPIDLKIDGKFL 843


>gi|145238800|ref|XP_001392047.1| ubiquitin hydrolase [Aspergillus niger CBS 513.88]
 gi|134076546|emb|CAK39738.1| unnamed protein product [Aspergillus niger]
 gi|350635972|gb|EHA24333.1| ubiquitin-specific protease [Aspergillus niger ATCC 1015]
          Length = 854

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 106/305 (34%), Positives = 169/305 (55%), Gaps = 21/305 (6%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L+SC PF Q L  +  R      + +P + A + F+ +F
Sbjct: 396 LQPRGLVNTGNMCYMNSVLQILVSCVPFYQFLDHIGRRASHSFNSDFPMIDALIMFMREF 455

Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
                  +++      K   + D G  F P     V++   P   +   G   Q+DAQEF
Sbjct: 456 RIIDAAHTEEQLKLRLKPNELEDYGEAFVPEFVYEVIRQL-PRFRDMRRGH--QQDAQEF 512

Query: 311 LSFIMDQMHDELLKLQGES-TSINGANTALVSLAEE---DEWETVGPKNKSAVTRTQSF- 365
           L F++++MH+E  +   ++  + + A      +A E   D W  VG K K+AVTR+    
Sbjct: 513 LGFLLEEMHEECNRAAKDAPVTASAAPNPEAEVANEEPGDGWLEVGHKQKAAVTRSSGHI 572

Query: 366 -LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 424
            L S ++ IFGG+++S  +  GNK S T++P+  L LDI +  ++ I DAL+  + PE++
Sbjct: 573 ALESPITKIFGGKIRSEFRVPGNKTSVTLEPYQPLQLDIGAPEINNIVDALKGLTKPESI 632

Query: 425 EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVL 482
           +G   SS G    VTA K + I+T+  +LILHL RF Y S  +G+ K+ K V +PL L +
Sbjct: 633 QGDFNSSRGPN--VTATKQIFIETMPPVLILHLKRFQYDSVTRGTQKIWKKVGYPLDLEI 690

Query: 483 GRDLL 487
            R++ 
Sbjct: 691 PREVF 695


>gi|307204000|gb|EFN82904.1| Ubiquitin carboxyl-terminal hydrolase 10 [Harpegnathos saltator]
          Length = 825

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 164/310 (52%), Gaps = 19/310 (6%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR-----TRDIPKAGYPTLTAFVGFV 253
           L+PRGL N  N C++N+ LQALMSCS F  L + +       +    +  P++ + + F+
Sbjct: 441 LVPRGLTNRNNYCYINSILQALMSCSLFYNLFKAMPHPKNCNKQNKHSTIPSINSLIRFI 500

Query: 254 SDFDT-------PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
            +F+        P    + K++  +++ G    PS    +LK  +      + GR  QED
Sbjct: 501 REFNPLPENARLPRKARANKRDDIIIENGVALEPSYMYTMLKYTSSAGVFPVEGR--QED 558

Query: 307 AQEFLSFIMDQMHDELLKLQG-ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSF 365
           A+EFLS +++ ++DE+L L    +   N  N A  +  +E+EW  +GPKNK ++TR+   
Sbjct: 559 AEEFLSCLLNAINDEMLDLMKLANNEHNDINNAEKNDGKEEEWRVIGPKNKGSITRSTEL 618

Query: 366 LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
             + LSDIF G+ +S V   G + S  +QPF  L LDI  E   ++++AL +  + + LE
Sbjct: 619 ERTPLSDIFRGKSRSRVSRPGEQPSDNIQPFFTLQLDI--EKADSVKEALDILVSKDRLE 676

Query: 426 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRD 485
           G   S T     + A K + ++ L  +LILHL  F Y   G +KL KSV FP+ L +   
Sbjct: 677 GMTCSKTKKQ--IEAWKQMTLEELPAVLILHLKWFVYKYNGCSKLIKSVEFPIDLKIDNK 734

Query: 486 LLVTPSAEVL 495
            L   +A+ L
Sbjct: 735 FLSASTAKKL 744


>gi|427796467|gb|JAA63685.1| Putative ubiquitin carboxyl-terminal hydrolase 10, partial
           [Rhipicephalus pulchellus]
          Length = 827

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/400 (32%), Positives = 197/400 (49%), Gaps = 38/400 (9%)

Query: 114 IKNSTNGPALSNG---VNHLKADGIDFSSFHQNAGGHANPS-PISKFHVLCDGNIDGRDQ 169
           ++ S   P + NG        AD     S     G    P  P S+     DG     D 
Sbjct: 366 VEESAAAPPVVNGSGSATRCWADLFKKGSSEAEGGNKRQPVVPFSR-----DGVTSDCDD 420

Query: 170 NAAACNSSISGSKEVPM-KAINE-PVKSVKDLL-PRGLINSGNLCFLNATLQALMSCSPF 226
               C  S+  S +  + +A+++  V     L+ PRGL N  N C++NA LQAL++C  F
Sbjct: 421 EVRPCRPSVPESVDTRLGRALHKFTVNHTPPLIQPRGLENGKNWCYINANLQALLACPAF 480

Query: 227 VQLLQELR-TRDIPKA-GYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFE 284
             LL  L     +P +   P +   + F+  +  P    + KK+  V  + + + P  F 
Sbjct: 481 YNLLYSLPLVPGLPGSNATPFMECLIYFLQTYAVPMVRETGKKDELV--VAKAYDPEHFR 538

Query: 285 AVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLK-LQGESTSING--------- 334
            +L    PD       + +QEDA+EFLSF+++ +HDE++  ++  S  +NG         
Sbjct: 539 DLLMKIKPDC-----KKGKQEDAEEFLSFMLNGLHDEMVSSMRSVSNGLNGQCNGEAQPP 593

Query: 335 ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQ 394
              A     +E  W+TV  +N+  VTR+  +LPS L DIFGG+++S V A G + SA++Q
Sbjct: 594 VEHADDDDDDEGAWKTVIHRNRHQVTRSAEYLPSPLMDIFGGEMRSSVTADG-ETSASLQ 652

Query: 395 PFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILI 454
           PF  L LDI  + V T+EDAL   +A E ++ Y +S +     V A +   ++ L ++LI
Sbjct: 653 PFFTLQLDI-QDGVKTVEDALLHLAAEEKVQNYHSSKSNKE--VDALRRTTLEKLPQVLI 709

Query: 455 LHLMRFSYGSQGST-KLHKSVRFPLQLVLGRDLLVTPSAE 493
           LHL RF Y   G   KL  ++  P QL L R L+  PS+E
Sbjct: 710 LHLKRFVYDKNGGCKKLMNAIHIPHQLQLDRKLV--PSSE 747


>gi|83770933|dbj|BAE61066.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 966

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/332 (34%), Positives = 171/332 (51%), Gaps = 51/332 (15%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L+SC PF Q L  +  R     ++ +P + A + F+ +F
Sbjct: 479 LEPRGLVNTGNMCYMNSVLQILVSCVPFYQFLDHIGRRASHSFQSDFPMIDALIMFMKEF 538

Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFT------------------- 291
                  S++      K   +   G  F P     V++                      
Sbjct: 539 RVIDAAHSEEQLRLRLKPNELEQYGDAFIPEFVYQVIRQLPRFRDMRVRSSLLIQPIYAQ 598

Query: 292 -PDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGE--STSINGANTALVSLAEE--- 345
             + PN   G   Q+DAQEFL F++++MH+E  +   +  ST  +GA     SL+EE   
Sbjct: 599 LTNYPNIQRGH--QQDAQEFLGFLLEEMHEECARAAKDAPSTKTDGA----ASLSEEPSA 652

Query: 346 ------DEWETVGPKNKSAVTRTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFL 397
                 D W  VG K K AVTR+   +   S +  IFGGQ++S  K  GNK S T++P+ 
Sbjct: 653 ADDESGDGWLEVGHKQKPAVTRSSGHMSYESPIMRIFGGQIRSEFKVPGNKTSVTLEPYQ 712

Query: 398 LLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHL 457
            L LDI S  ++ I DAL+  + PE+++G   SS G    VTA K + I+ L  +LILHL
Sbjct: 713 PLQLDIGSPEINNIVDALKGLTKPESIQGDFNSSRGPN--VTATKQIFIENLPPVLILHL 770

Query: 458 MRFSYGS--QGSTKLHKSVRFPLQLVLGRDLL 487
            RF Y S  +G+ K+ K V +PL L + R++L
Sbjct: 771 KRFQYDSVTRGTQKIWKKVGYPLDLEIPREVL 802


>gi|328868647|gb|EGG17025.1| ubiquitin hydrolase B [Dictyostelium fasciculatum]
          Length = 1019

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/318 (34%), Positives = 162/318 (50%), Gaps = 43/318 (13%)

Query: 202 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP-KAGYPTLTAFVGFVSD-FDTP 259
           +G++N+ N CF+N  LQ+L+ C PFV+LL+ +   + P +  YPTL     F  D F T 
Sbjct: 621 KGMVNTSNTCFMNVILQSLIGCQPFVKLLKSISDSEGPSQTKYPTLHHLKQFHDDYFSTI 680

Query: 260 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNS-----------ISGRPR----- 303
              ++  K +S     +P +P  F  ++K+F   +              IS + R     
Sbjct: 681 QVSNNTSKYVSS---PQPINPKYFGDIVKSFNSKIAPPSPSPIIPFSVPISNKKRTKLTI 737

Query: 304 ------------QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAE-----ED 346
                       Q+DAQEFL++ +D +H+E + L  E          +  + E      D
Sbjct: 738 YEAVQQQSLNSCQQDAQEFLTYFLDLIHEEFVSLLKEIEGPKEEKQMVQPILEPTTKDND 797

Query: 347 EWETVGPKNKSAVT--RTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIY 404
            WE VG KNK++     T +   S +S IF G ++S V    +K S T+QPF  LHLD+ 
Sbjct: 798 GWEIVGAKNKTSTVNDHTTNLNGSPISQIFSGTMRSSVNRSESKESVTLQPFYCLHLDVR 857

Query: 405 SEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS 464
            E+VHT+E+AL LF   E LEGY  S+ G    VTA KS+ I+ L KILI+H  RF+Y +
Sbjct: 858 PESVHTLEEALSLFMKEETLEGYTCSTKGVE--VTASKSMSIEVLPKILIVHFKRFAYDT 915

Query: 465 QGSTKLHKSVRFPLQLVL 482
           +   KL K + FP  L L
Sbjct: 916 EAQ-KLDKFISFPTTLTL 932


>gi|398388325|ref|XP_003847624.1| hypothetical protein MYCGRDRAFT_77923 [Zymoseptoria tritici IPO323]
 gi|339467497|gb|EGP82600.1| hypothetical protein MYCGRDRAFT_77923 [Zymoseptoria tritici IPO323]
          Length = 498

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/305 (36%), Positives = 170/305 (55%), Gaps = 27/305 (8%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L+ C+PF   L ++R R +   K+  P + A + F+ +F
Sbjct: 32  LEPRGLVNTGNMCYMNSILQVLVFCAPFYSFLDQVRQRTVHSMKSDTPLVDAMIMFMREF 91

Query: 257 ----DTPSGGSSKK--KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS-GRPRQEDAQE 309
               D  S  + +K  K   +   G P +P     V++     +P   S  R  Q+DA+E
Sbjct: 92  KVLADAESADALRKTLKQDQLEVYGDPVTPEYVYEVIRK----LPRFASMRRGHQQDAEE 147

Query: 310 FLSFIMDQMHDE---LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT--QS 364
           FL F+++ +HDE   +++ Q +    NG  +    +AE   W  VGPK K++VTRT  Q 
Sbjct: 148 FLGFLLEGLHDECVHVMQGQMDEPKENGVTSPDTVIAE--GWLEVGPKQKASVTRTAGQQ 205

Query: 365 FLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 424
             PS ++ IFGG L+S ++  G K S T++P+  L LDI +  V+ I DAL+  +  E L
Sbjct: 206 DAPSPVTKIFGGHLRSELRVPGQKDSVTLEPYQPLQLDIGAPHVNNIIDALKGITRTETL 265

Query: 425 EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            G      G  G  TAKK V I TL  +LILHL RF Y +   G+ K+ K V +PL+L +
Sbjct: 266 TG----DFGGKG-STAKKQVFIDTLPPVLILHLKRFQYDNSQTGTQKIWKRVGYPLELEI 320

Query: 483 GRDLL 487
            +D+ 
Sbjct: 321 PKDVF 325


>gi|121702365|ref|XP_001269447.1| ubiquitin C-terminal hydrolase, putative [Aspergillus clavatus NRRL
           1]
 gi|119397590|gb|EAW08021.1| ubiquitin C-terminal hydrolase, putative [Aspergillus clavatus NRRL
           1]
          Length = 870

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 167/306 (54%), Gaps = 22/306 (7%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
           L P+GL+N+GN+C++N+ LQ L+SC PF Q L  +  R     ++ +P + A + F+ +F
Sbjct: 400 LEPKGLVNTGNMCYMNSVLQILVSCVPFYQFLDHVGKRATHSVQSEFPVVDAMIMFMREF 459

Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
                  S++      K   + + G  F P     V++   P   +   G   Q+DAQEF
Sbjct: 460 RVIDAAHSEEQLRLRLKPNELEEYGEAFIPEFVYQVIRQL-PRFRDMRRGH--QQDAQEF 516

Query: 311 LSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDE-----WETVGPKNKSAVTRTQSF 365
           L F++++MH+E  +   +++  + A +        DE     W  VG K K+A+TR+   
Sbjct: 517 LGFLLEEMHEECARAAKDASLADSATSVSAEPPSVDEQSGDGWLEVGHKQKAAITRSSGH 576

Query: 366 LP--SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 423
           +   S ++ IFGG ++S  K  GNK S T++P+  L LDI S  ++ I DAL+  + PE+
Sbjct: 577 IAQESPITKIFGGNIRSEFKVPGNKTSVTLEPYQPLQLDIGSPDINNIVDALKGLTKPES 636

Query: 424 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLV 481
           ++G   SS G    VTA K + I+ L  +LILHL RF Y S  +G+ K+ K + +PL L 
Sbjct: 637 IQGDFNSSRGPN--VTATKQIFIENLPPVLILHLKRFQYDSATRGTQKIWKKIGYPLDLE 694

Query: 482 LGRDLL 487
           + R++ 
Sbjct: 695 IPREVF 700


>gi|452987313|gb|EME87069.1| hypothetical protein MYCFIDRAFT_49312 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 890

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/318 (35%), Positives = 175/318 (55%), Gaps = 31/318 (9%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L+ C PF   L ++R R +   K+G P + A + F+ +F
Sbjct: 423 LEPRGLVNTGNMCYMNSILQVLIFCVPFYNFLDQVRQRTVHSMKSGTPLVDAMIMFMREF 482

Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRP-RQEDAQE 309
              +   S        K   +   G P +P     V++     +P   S R   Q+DA+E
Sbjct: 483 KVLASAESVDALRALLKQEQLEQYGDPVTPDYVYEVIRK----LPRFASMRRGHQQDAEE 538

Query: 310 FLSFIMDQMHDELLK-LQGE-----STSINGANTALVSLAEEDEWETVGPKNKSAVTRT- 362
           FL F+++ +HDE ++ +QG+       S++  +TA+ S    D W  VGPK K++VTRT 
Sbjct: 539 FLGFLLEGLHDECVQVMQGQPDEQPKQSVSLPDTAM-SPGSADGWLEVGPKQKASVTRTA 597

Query: 363 -QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
            Q   PS ++ IFGG L+S ++  G K S T++P+  L LDI +  V+ I DAL+  +  
Sbjct: 598 GQQDAPSPITKIFGGHLRSELRVPGLKDSVTLEPYKPLQLDIGASHVNNIVDALKGITYT 657

Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQ 479
           E L G      G  G  TAKK V I +L  +L+LHL RF Y +   G+ K+ K V +PL+
Sbjct: 658 EALTG----DFGGKG-TTAKKQVFIDSLPPVLVLHLKRFQYDNSFSGTQKIWKKVGYPLE 712

Query: 480 LVLGRDLLVTPSAEVLQF 497
           L + +++   P A+  Q 
Sbjct: 713 LQIPKEVF--PPAKRAQL 728


>gi|321457135|gb|EFX68228.1| hypothetical protein DAPPUDRAFT_301522 [Daphnia pulex]
          Length = 380

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/305 (34%), Positives = 168/305 (55%), Gaps = 25/305 (8%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRT---RDIPKAGYPTLTAFVGFVSD 255
           LLPRGLIN  N C++NATLQAL++CSPFV L++ L     R   ++  P + + + F+  
Sbjct: 6   LLPRGLINKSNWCYINATLQALIACSPFVHLVKSLERFTGRKHEESTTPIMDSVIEFIDQ 65

Query: 256 FDT------PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQE 309
           F+           S+KK+       G  F PS   ++ K  +     +     RQEDA+E
Sbjct: 66  FEVIPVRIGKERASAKKEEPH---FGTSFEPS---SIYKMLSKIRSETFKVEGRQEDAEE 119

Query: 310 FLSFIMDQMHDELLKLQGESTSINGANTALVS------LAEEDEWETVGPKNKSAVTRTQ 363
           FLS +++ +HDE++ +  ++T++    T + +       +++++W+ +GPKN+  VT   
Sbjct: 120 FLSCLLNGLHDEMIDIV-KATNLPVGKTPVQAGEVKPCTSDDEDWQVIGPKNRGCVTHIT 178

Query: 364 SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 423
           ++  + +S++F GQ++S +   G +++AT+QPF  L LDI +E V+++ DAL    + E 
Sbjct: 179 TYSKTPISNLFLGQMRSALHYAGAQSTATLQPFFSLQLDIQNEKVNSVRDALACLVSKEP 238

Query: 424 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG-SQGSTKLHKSVRFPLQLVL 482
           L GY    +G    V A +   ++ L  ILILHL  F Y  S G  KL K V F   L L
Sbjct: 239 LTGYICPKSGQE--VEASRQTTLEELPPILILHLKCFVYDKSGGCQKLMKRVDFSSDLEL 296

Query: 483 GRDLL 487
            +D L
Sbjct: 297 SKDFL 301


>gi|396469489|ref|XP_003838418.1| similar to ubiquitin carboxyl-terminal hydrolase 10 [Leptosphaeria
           maculans JN3]
 gi|312214986|emb|CBX94939.1| similar to ubiquitin carboxyl-terminal hydrolase 10 [Leptosphaeria
           maculans JN3]
          Length = 881

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 162/310 (52%), Gaps = 24/310 (7%)

Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVG 251
           K V  + PRGL+N+GNLC++N+ LQ L+ C+PF   L ++  R     K+  P + A + 
Sbjct: 418 KKVAFIEPRGLVNTGNLCYMNSILQVLLFCAPFYDFLDQVAKRAAHSFKSETPLVDAMIM 477

Query: 252 FVSDFDTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 305
           F+ DF      +S      + K+  +   G P +P     V+K   P   N   G  +QE
Sbjct: 478 FMRDFKLIDSAASVDQLRLRLKDNELEQYGDPLTPEYVYDVIKRL-PRFDNMKRG--QQE 534

Query: 306 DAQEFLSFIMDQMHDELLKL-----QGESTSINGANTALVSLAEEDEWETVGPKNKSAVT 360
           DA+EFL F++  +HDE  +L     Q +S     + T     + E  W  VGPK K+AVT
Sbjct: 535 DAEEFLGFLLAGLHDECAQLIKKDRQNQSQEPLASATGEQPGSGESGWHEVGPKQKTAVT 594

Query: 361 RTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLF 418
           ++   +   + ++ IFGG+L+S  K  G K S T++P+  L LDI    ++ I DAL+  
Sbjct: 595 QSSGTIEFETPITKIFGGKLRSEYKKPGEKPSVTLEPYQPLQLDIGEPHINNISDALKNL 654

Query: 419 SAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
           +  E L+G         G   + K V I+TL  +LILHL RF Y  +G  K+ K + +PL
Sbjct: 655 TRLETLDG------AARGARASTKQVHIETLPPVLILHLKRFHYDEKGPQKIWKKIGYPL 708

Query: 479 QLVLGRDLLV 488
           +L L +++  
Sbjct: 709 ELELPKEVFA 718


>gi|367026027|ref|XP_003662298.1| hypothetical protein MYCTH_2302790 [Myceliophthora thermophila ATCC
           42464]
 gi|347009566|gb|AEO57053.1| hypothetical protein MYCTH_2302790 [Myceliophthora thermophila ATCC
           42464]
          Length = 950

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 110/315 (34%), Positives = 170/315 (53%), Gaps = 32/315 (10%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L+ C PF+  L ++  +     K+  P L A + F+ +F
Sbjct: 489 LEPRGLVNTGNMCYMNSVLQVLIFCIPFLDFLDQVSKKAAHSFKSETPLLDAMIMFMREF 548

Query: 257 ---DTPSGGSSKKKNISVLD---IGRPFSPSMFEAVLKNFTPDVPNSIS-GRPRQEDAQE 309
              D+ +     +K +   +    G PF+P      ++     +P   S  R  Q+DAQE
Sbjct: 549 KVIDSATSAEQLRKRLKSEEYEKFGEPFTPEFVYDAIRT----LPRFASMRRGHQQDAQE 604

Query: 310 FLSFIMDQMHDE---LLKLQGESTSINGANTALVSLAEE---------DEWETVGPKNKS 357
           FL F+++ +HDE   +++    ST+    N++L S             D+W  VGP+ +S
Sbjct: 605 FLGFLLEGLHDECVQVMRTVPASTASTAPNSSLPSPTSSRANDASEGGDDWLEVGPRQRS 664

Query: 358 AVTRT--QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDAL 415
           AVTR+   S   S ++ IFGGQL+S ++  GNK S T++P+  L LDI S  V  I DAL
Sbjct: 665 AVTRSSGHSNTLSPITKIFGGQLRSELRVPGNKNSVTLEPYQPLQLDIGSPEVRNIIDAL 724

Query: 416 RLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY---GSQGSTKLHK 472
           +  + PE L G   S  G    V A K V I+++  +LILHL RF +   G  G+ K+ K
Sbjct: 725 KGLTRPEVLHGDFNSPHGKD--VRATKQVFIESVPPVLILHLKRFQFDAEGYGGTVKIWK 782

Query: 473 SVRFPLQLVLGRDLL 487
            V +PL+    R++L
Sbjct: 783 KVGYPLEFEFPREVL 797


>gi|444722234|gb|ELW62932.1| Ubiquitin carboxyl-terminal hydrolase 10 [Tupaia chinensis]
          Length = 881

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 114/360 (31%), Positives = 180/360 (50%), Gaps = 75/360 (20%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNA------------------TLQALMSCSPFVQLL 230
           I++PV     L PRGLIN GN C++NA                  TLQAL++C P   L+
Sbjct: 401 IHKPVS----LQPRGLINKGNWCYINAEVPRARFFPLRFLTAHVQTLQALVACPPMYHLM 456

Query: 231 Q--ELRTR-DIPKAGYPTLTAFVGFVSDFDT------PSGGSSKKK-------------- 267
           +   L ++   P    P + +FV  +++F        P  G    +              
Sbjct: 457 KFIPLYSKVQRPCTSTPMIDSFVRLMNEFTNMPVPPKPRQGEYHVRLMNEFTNMPVPPKP 516

Query: 268 -----NISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                + +V DI  G  F P+    +L      + +S+S + RQEDA+E+L FI++ +H+
Sbjct: 517 RQALGDKTVRDIRPGAAFEPTYIYRLLTV----IKSSLSEKGRQEDAEEYLGFILNGLHE 572

Query: 321 ELLKLQG---------------ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSF 365
           E+L L+                +S S++           E+EWE VGP+NKS+VTR   F
Sbjct: 573 EMLNLKKLLSPSNEKLPVSNGPKSHSVSEEEQEEQGAGSEEEWEQVGPRNKSSVTRQAEF 632

Query: 366 LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
           + + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S+ + T++DAL    A E+++
Sbjct: 633 VQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDALESLVARESVQ 692

Query: 426 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQGSTKLHKSVRFPLQLVLGR 484
           GY T +      V   + V ++ L  +L+LHL RF Y  + G  KL K++ +P+ L + +
Sbjct: 693 GYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEYPVDLEISK 749


>gi|355757014|gb|EHH60622.1| Ubiquitin carboxyl-terminal hydrolase 10, partial [Macaca
           fascicularis]
          Length = 792

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 112/323 (34%), Positives = 178/323 (55%), Gaps = 35/323 (10%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PR LI+ GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 400 IHKPVS----LQPRELISKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 455

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L        +S+S 
Sbjct: 456 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 511

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAEEDE------ 347
           + RQEDA+E+L FI++ +H+E+L L+       E  +I NG     V+  E++E      
Sbjct: 512 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPRNHSVTEEEQEEQGEESE 571

Query: 348 --WETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
             WE   P+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L LDI S
Sbjct: 572 DEWEQADPRNKTSVTRQAEFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 631

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
           + + T++DAL    A  +++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 632 DKIRTVQDALESLVARASVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 688

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 689 GGCQKLIKNIEYPVDLEISKELL 711


>gi|115388639|ref|XP_001211825.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114195909|gb|EAU37609.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 858

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 109/313 (34%), Positives = 166/313 (53%), Gaps = 37/313 (11%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L+SC PF Q L  +  R     ++  P + A V F+ +F
Sbjct: 396 LEPRGLVNTGNMCYMNSVLQILVSCVPFYQFLDLVGRRASHSFQSEVPLIDAMVMFMKEF 455

Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
                  S++      K   +   G  F+P     V++   P   +   G   Q+DAQEF
Sbjct: 456 RIIDAAHSEEQLRLRLKPNELEQYGEAFTPEFVYQVIRQL-PRFRDMRRGH--QQDAQEF 512

Query: 311 LSFIMDQMHDELLKL------------QGESTSINGANTALVSLAEEDEWETVGPKNKSA 358
           L F++++MH+E  ++             G+ T+ +G +         D W  VG K K+A
Sbjct: 513 LGFLLEEMHEECARVAKDAPVKTDDAAPGDETAADGESG--------DGWLEVGHKQKAA 564

Query: 359 VTRTQSF--LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALR 416
           VTR+     L S ++ IFGG+++S  +  GNK S T +P+  L LDI S  VH I DAL+
Sbjct: 565 VTRSSGHIALESPITRIFGGKIRSEFRVPGNKTSVTYEPYQPLQLDIGSPDVHNIVDALK 624

Query: 417 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSV 474
             + PE+++G   S  G    VTA K + I+ L  +LILHL RF Y S  +G+ K+ K +
Sbjct: 625 GLTKPESIQGDFNSPRGPN--VTATKQLFIEVLPPVLILHLKRFQYDSVTRGTQKIWKKI 682

Query: 475 RFPLQLVLGRDLL 487
            +PL L L R++ 
Sbjct: 683 GYPLDLELPREVF 695


>gi|342882079|gb|EGU82833.1| hypothetical protein FOXB_06636 [Fusarium oxysporum Fo5176]
          Length = 930

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/304 (36%), Positives = 164/304 (53%), Gaps = 24/304 (7%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           L PRGLIN+GN+C++N+ LQ LM C PF   L ++  R +   K+  P + A + F+ +F
Sbjct: 486 LEPRGLINTGNMCYMNSVLQVLMFCLPFYDFLSQISKRAVHSFKSDTPLIDAMIMFMHEF 545

Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPS-MFEAVLKNFTPDVPNSIS-GRPRQEDAQ 308
            T    +  +      KN  +   G PF+P  ++EA+ +     +P   S  R  Q+DA+
Sbjct: 546 KTIKSAAGIESLRTTLKNEELERYGDPFTPEFVYEAIRQ-----LPRFASMRRGHQQDAE 600

Query: 309 EFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT---QSF 365
           EFL F++  + DE   +   ST  +    A       ++W  VG K K+AV+R+    SF
Sbjct: 601 EFLGFLLQSLDDECTAVLKNSTLPDQERRASSGSGAGEDWLEVGRKQKAAVSRSSGPNSF 660

Query: 366 LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
            P  +S IFGG L+S  +  G K S T +P+  L LDI S  V  + DALR  + PE L+
Sbjct: 661 SP--ISRIFGGSLRSEFRVPGLKDSITTEPYQPLQLDIGSPDVRNVVDALRGLTRPERLQ 718

Query: 426 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLG 483
           G   S  G    VTA K V I TL  +LILHL RF + ++  G+ K+ K + +PL+L + 
Sbjct: 719 GDFNSPRGKD--VTATKQVFIDTLPPVLILHLKRFQFDAEGNGTVKIWKKIGYPLELEIP 776

Query: 484 RDLL 487
           R+ L
Sbjct: 777 REAL 780


>gi|336269021|ref|XP_003349272.1| hypothetical protein SMAC_12609 [Sordaria macrospora k-hell]
 gi|380089845|emb|CCC12378.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 1000

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 171/310 (55%), Gaps = 29/310 (9%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L++C PF   L ++  + +    +  P L A + F+ +F
Sbjct: 539 LEPRGLVNTGNMCYMNSILQVLVNCIPFYDFLDQVSKKAVHSFNSETPLLDAMIMFMREF 598

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR--------QEDA 307
                       +S+  + R       E   + FTP+ V ++I   PR        Q+DA
Sbjct: 599 KVIDSA------VSIDQLKRRLKSEELEQYGEAFTPEFVYDAIRKLPRFASMRRGHQQDA 652

Query: 308 QEFLSFIMDQMHDE---LLKLQGESTSINGANTALVSLAEE---DEWETVGPKNKSAVTR 361
           +EFL F+++ +HDE   +++    ST+    N++L S       D+W  VGP+ K+A+TR
Sbjct: 653 EEFLGFLLEGLHDECTHVMRTLPVSTTSTAPNSSLPSPTTSNAGDDWLEVGPRQKAAITR 712

Query: 362 TQSFLPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
           T  +  S   ++ IFGGQL+S ++  G K+S T++P+  L LDI +  V  I DALR  +
Sbjct: 713 TSGYSSSISPITRIFGGQLRSELRIPGLKSSVTLEPYQPLQLDIGAPEVRNIVDALRGLT 772

Query: 420 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFP 477
            PE + G   S  G     T  K V I++L  +LILHL RF + ++  G+ K+ K V +P
Sbjct: 773 RPETIHGDFNSPHGKDAKAT--KQVFIESLPPVLILHLKRFQFDAEGHGTIKIWKKVGYP 830

Query: 478 LQLVLGRDLL 487
           L+L + R+++
Sbjct: 831 LELEIPREVV 840


>gi|189202394|ref|XP_001937533.1| ubiquitin carboxyl-terminal hydrolase 10 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187984632|gb|EDU50120.1| ubiquitin carboxyl-terminal hydrolase 10 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 870

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/309 (33%), Positives = 160/309 (51%), Gaps = 24/309 (7%)

Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVG 251
           K V  L PRGL+N+GNLC++N+ LQ L+ C PF   L ++  R +   K+  P + A + 
Sbjct: 407 KKVSFLEPRGLVNTGNLCYMNSILQVLLFCVPFYDFLDQVAKRAVHSFKSETPLVDAMIM 466

Query: 252 FVSDFDTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 305
           F+ DF      ++      + K   +   G P +P     V+K   P   N   G+  QE
Sbjct: 467 FLRDFKLIDSAATVEQLRLRLKGNDLEQYGEPLTPEYVYDVIKRL-PRFDNMKRGQ--QE 523

Query: 306 DAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAE-----EDEWETVGPKNKSAVT 360
           DA+EFL F++  +HDE + +         A+T      E     +  WE VG K K+AVT
Sbjct: 524 DAEEFLGFLLAGLHDECVHIIKTGKQSQPADTITSPKTERSGSVDGGWEEVGHKQKTAVT 583

Query: 361 RTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLF 418
           +    +   S ++ IFGG+L+S  K  G KAS T++P+  L LDI  + ++ I DAL+  
Sbjct: 584 QNSGAIDIESPVTKIFGGKLRSEYKRPGEKASVTLEPYQPLQLDIGEQNINNISDALKNL 643

Query: 419 SAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
           +  E L+G         G   + K V I+TL  +LILHL RF Y  +G  K+ K + +PL
Sbjct: 644 TRLETLDG------AARGAKASTKQVHIETLPPVLILHLKRFHYDEKGPQKIWKKIGYPL 697

Query: 479 QLVLGRDLL 487
           +L L +++ 
Sbjct: 698 ELELPKEVF 706


>gi|402077713|gb|EJT73062.1| ubiquitin C-terminal hydrolase [Gaeumannomyces graminis var.
           tritici R3-111a-1]
          Length = 1010

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/319 (36%), Positives = 175/319 (54%), Gaps = 37/319 (11%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
           L PRGLIN+GN+C++N+ LQ L+ C PF   L++   +      +  P + A + F+ DF
Sbjct: 543 LEPRGLINTGNMCYMNSVLQVLIFCIPFYDFLEQAGKKVAHSFNSETPLIDAMIEFLRDF 602

Query: 257 DTPSGGSS------KKKNISVLDIGRPFSPS-MFEAVLKNFTPDVPN-SISGRPRQEDAQ 308
                  S      + KN  +   G PF P  ++EA+ K     +P  S   R  Q+DA+
Sbjct: 603 KIIDSAVSVDQLRRRLKNEELEQYGEPFIPEFVYEAIKK-----LPRFSSMRRGHQQDAE 657

Query: 309 EFLSFIMDQMHDE---LLKLQGESTSINGAN-------TALVSLAEEDE------WETVG 352
           EFL F+++ +HDE   +L+    S++++ A        TA VS A  D       W  VG
Sbjct: 658 EFLGFLLESLHDECAHVLRAVPPSSNVSTAPNSSLPTPTASVSSANLDSGDASNVWLEVG 717

Query: 353 PKNKSAVTRT--QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHT 410
           PK +SA+TR+   S   S ++ IFGGQL+S ++  G K S T++P+  L LDI +  V  
Sbjct: 718 PKQRSAITRSSGHSDTSSPITKIFGGQLRSELRVPGLKDSVTLEPYQPLQLDIGAPQVRN 777

Query: 411 IEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GST 468
           I DALR  + PE+L G   S  G    VTA K V I++L  +LILHL RF + ++  G+ 
Sbjct: 778 IVDALRHLTNPESLRGDFGSPRGKD--VTATKQVFIESLPPVLILHLKRFQFDAEGNGTV 835

Query: 469 KLHKSVRFPLQLVLGRDLL 487
           K+ K + +PL+L + R+++
Sbjct: 836 KIWKKIGYPLELEIPREVV 854


>gi|225682996|gb|EEH21280.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
          Length = 861

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/307 (34%), Positives = 168/307 (54%), Gaps = 25/307 (8%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDT 258
           PRGL+N+GN+C++N+ LQ L+ C PF + L ++  R +   K+  P + A + F+ +F  
Sbjct: 352 PRGLVNTGNMCYMNSILQILVFCVPFYEFLDKISRRAVHSIKSELPLIDAMIMFMREFRV 411

Query: 259 PSGGSSKKK------NISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
               +S +K         +   G  F P     V+++  P   +   G   Q+DAQEFL 
Sbjct: 412 IDAATSAEKLRLRLKQNELEQYGESFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEFLG 468

Query: 313 FIMDQMHDELLKLQGESTSI-----NGANTALVSLAEE---DEWETVGPKNKSAVTRTQS 364
           F+++++H+E  +   ++TS         +T   S A E   + W  VG K K ++TR+  
Sbjct: 469 FLLEELHEECTQAGKQATSTGPDIPTPVDTDSASAASEPSVEGWLEVGHKQKPSITRSSG 528

Query: 365 FLPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
            + S   ++ IFGG+L+S  +  GNK S T++P+  L LDI S  V  I DAL+  + PE
Sbjct: 529 HVASESPITKIFGGKLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVTNIIDALKGLTKPE 588

Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQL 480
            ++G   SS G    VTA K V I+TL  +LILHL RF Y S  +G+ K+ K V +PL+L
Sbjct: 589 TMQGDFNSSRGPK--VTATKQVFIETLPPVLILHLKRFQYDSVTKGTQKIWKRVGYPLEL 646

Query: 481 VLGRDLL 487
            + R++ 
Sbjct: 647 EVPREVF 653


>gi|336472069|gb|EGO60229.1| hypothetical protein NEUTE1DRAFT_119446 [Neurospora tetrasperma
           FGSC 2508]
          Length = 1079

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 169/310 (54%), Gaps = 29/310 (9%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L++C PF   L ++  + +    +  P L A + F+ +F
Sbjct: 617 LEPRGLVNTGNMCYMNSILQVLVNCIPFYDFLDQVSKKAVHSFNSETPLLDAMIMFMREF 676

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR--------QEDA 307
                       +S+  + R       E   + FTP+ V ++I   PR        Q+DA
Sbjct: 677 KVIDSA------VSIDQLKRRLKSEELEQYGEAFTPEFVYDAIRKLPRFASMRRGHQQDA 730

Query: 308 QEFLSFIMDQMHDELLKLQGE---STSINGANTALVSLAEE---DEWETVGPKNKSAVTR 361
           +EFL F+++ +HDE   +      ST+    N++L S       D+W  VGP+ K+A+TR
Sbjct: 731 EEFLGFLLEGLHDECTHVMSTLPVSTTSTAPNSSLPSPTASNTGDDWLEVGPRQKAAITR 790

Query: 362 TQSFLPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
           T  +  S   ++ IFGGQL+S ++  G K+S T++P+  L LDI +  V  I DALR  +
Sbjct: 791 TSGYSSSISPITRIFGGQLRSELRIPGLKSSVTLEPYQPLQLDIGAPEVRNIVDALRGLT 850

Query: 420 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFP 477
            PE + G   S  G     T  K V I++L  +LILHL RF + ++  G+ K+ K V +P
Sbjct: 851 RPETIHGDFNSPHGKDAKAT--KQVFIESLPPVLILHLKRFQFDAEGHGTIKIWKKVGYP 908

Query: 478 LQLVLGRDLL 487
           L+L + R+++
Sbjct: 909 LELEIPREVV 918


>gi|451851979|gb|EMD65274.1| hypothetical protein COCSADRAFT_87496 [Cochliobolus sativus ND90Pr]
          Length = 882

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 173/359 (48%), Gaps = 51/359 (14%)

Query: 167 RDQNAAACNSSISGSKEVPMKAINEPV-------------------KSVKDLLPRGLINS 207
           R +NA      I+     P    N PV                   K V  + PRGL+NS
Sbjct: 373 RAKNATKAAQPIAPPATTPAPVTNGPVVQKSNTLADVLASFSVDSEKKVSFIEPRGLVNS 432

Query: 208 GNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDTPSGGSS- 264
           GNLC++N+ LQ L+ C PF   L ++  R +   K+  P + A + F+ DF      ++ 
Sbjct: 433 GNLCYMNSILQVLLFCVPFYDFLDQVAKRAVHSFKSETPLIDAMIMFLRDFKLIDSAATV 492

Query: 265 -----KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
                + K+  +   G P +P     V+K   P   N   G  +QEDA+EFL F++  +H
Sbjct: 493 EQLRLRLKSNDIEQYGDPLAPEYVYDVIKRL-PRFDNMKRG--QQEDAEEFLGFLLAGLH 549

Query: 320 DELLKL---------QGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSF--LPS 368
           DE +++          G  TS N   T  V    +  WE VG K ++AVT+      + S
Sbjct: 550 DECVQIIKSGKQSQPAGAVTSENSEQTGSV----DGGWEEVGHKQRTAVTQNSGAIDIES 605

Query: 369 ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYR 428
            ++ IFGG+L+S  K  G KAS T++P+  L LDI    ++ I DAL+  +  E L+G  
Sbjct: 606 PITKIFGGKLRSEYKRPGEKASVTLEPYQPLQLDIGEPNINNISDALKNLTRLETLDG-- 663

Query: 429 TSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLL 487
                  G   + K V I++L  +LILHL RF Y  +G  K+ K + +PL+L L +++ 
Sbjct: 664 ----AARGAKASTKQVHIESLPPVLILHLKRFHYDEKGPQKIWKKIGYPLELELPKEVF 718


>gi|320040494|gb|EFW22427.1| ubiquitin C-terminal hydrolase [Coccidioides posadasii str.
           Silveira]
          Length = 592

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/307 (34%), Positives = 167/307 (54%), Gaps = 24/307 (7%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDT 258
           PRGL+N+GN+C++N+ LQ L+ C PF   L  +  R     K+  P L A + F+ +F  
Sbjct: 123 PRGLVNTGNMCYMNSILQVLVFCVPFYDFLDRVSRRAAHSFKSELPLLDAMIMFMREFRV 182

Query: 259 PSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
               SS      + K   +   G  F P     V+++  P   +   G   Q+DAQEFL 
Sbjct: 183 IGSASSVEQLRQRLKQTELEQYGSSFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEFLG 239

Query: 313 FIMDQMHDELLKLQGESTSINGANTA----LVSLAEE---DEWETVGPKNKSAVTRTQSF 365
           F+ +++H+E L     S+++  A +A     VS+ ++   + W  VG K K+AVTR+   
Sbjct: 240 FLFEELHEECLHAIKSSSALPEAASASDVDAVSMTDDSAGEGWLEVGHKQKAAVTRSSGH 299

Query: 366 LPSA--LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 423
           + S   ++ IFGG L+S  +  GNK S T++P+  L LDI S  V+ I DAL+  + PE 
Sbjct: 300 IASESPITRIFGGNLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTRPET 359

Query: 424 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLV 481
           + G  +SS G    V A K V I++L  +LILHL RF Y S  +G+ K+ K + +PL+L 
Sbjct: 360 MHGDFSSSRGTK--VNATKQVFIESLPPVLILHLKRFHYDSVTKGTQKIWKKIGYPLELE 417

Query: 482 LGRDLLV 488
           + +++  
Sbjct: 418 IPKEVFA 424


>gi|85098196|ref|XP_960580.1| hypothetical protein NCU04333 [Neurospora crassa OR74A]
 gi|28922080|gb|EAA31344.1| predicted protein [Neurospora crassa OR74A]
          Length = 1104

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 169/310 (54%), Gaps = 29/310 (9%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L++C PF   L ++  + +    +  P L A + F+ +F
Sbjct: 642 LEPRGLVNTGNMCYMNSILQVLVNCIPFYDFLDQVSKKAVHSFNSETPLLDAMIMFMREF 701

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR--------QEDA 307
                       +S+  + R       E   + FTP+ V ++I   PR        Q+DA
Sbjct: 702 KVIDSA------VSIDQLKRRLKSEELEQYGEAFTPEFVYDAIRKLPRFASMRRGHQQDA 755

Query: 308 QEFLSFIMDQMHDELLKLQGE---STSINGANTALVSLAEE---DEWETVGPKNKSAVTR 361
           +EFL F+++ +HDE   +      ST+    N++L S       D+W  VGP+ K+A+TR
Sbjct: 756 EEFLGFLLEGLHDECTHVMSTLPVSTTSTAPNSSLPSPTASNTGDDWLEVGPRQKAAITR 815

Query: 362 TQSFLPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
           T  +  S   ++ IFGGQL+S ++  G K+S T++P+  L LDI +  V  I DALR  +
Sbjct: 816 TSGYSSSISPITRIFGGQLRSELRIPGLKSSVTLEPYQPLQLDIGAPEVRNIVDALRGLT 875

Query: 420 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFP 477
            PE + G   S  G     T  K V I++L  +LILHL RF + ++  G+ K+ K V +P
Sbjct: 876 RPETIHGDFNSPHGKDAKAT--KQVFIESLPPVLILHLKRFQFDAEGHGTIKIWKKVGYP 933

Query: 478 LQLVLGRDLL 487
           L+L + R+++
Sbjct: 934 LELEIPREVV 943


>gi|440470881|gb|ELQ39920.1| ubiquitin carboxyl-terminal hydrolase 10 [Magnaporthe oryzae Y34]
 gi|440485747|gb|ELQ65671.1| ubiquitin carboxyl-terminal hydrolase 10 [Magnaporthe oryzae P131]
          Length = 1024

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/312 (33%), Positives = 174/312 (55%), Gaps = 30/312 (9%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
           + PRGLIN+GN+C++N+ LQ L+ C+PF   L++   +      +  P + A + F+ DF
Sbjct: 567 IEPRGLINTGNMCYMNSVLQVLLFCTPFYDFLEQAGKKVTHSFNSETPLIDAMIEFMRDF 626

Query: 257 DTPSGGSS------KKKNISVLDIGRPFSPS-MFEAVLKNFTPDVPN-SISGRPRQEDAQ 308
                  S      + K+  +   G PF+P  ++EA+ K     +P  S   R  Q+DA+
Sbjct: 627 KIIDSAISVDQLRRRLKSEELEQYGEPFTPEFIYEAIRK-----LPRFSSMRRGHQQDAE 681

Query: 309 EFLSFIMDQMHDELLKLQGESTSINGANTALVSLAE---------EDEWETVGPKNKSAV 359
           EFL F ++ +HDE   +   +   +  +TA  S A+         +++W  VGP+ ++A+
Sbjct: 682 EFLGFFLESLHDECSHVMRAAGQQSITSTAPQSSAQTPTTSAPSVDNDWLEVGPRQRAAI 741

Query: 360 TRT--QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 417
           TR+   S + S ++ IFGG+L+S ++  G K S T++P+  L LDI +  V  I DALR 
Sbjct: 742 TRSSGHSDMSSPVTKIFGGELRSELRVPGLKDSVTLEPYQPLQLDIGAPQVRNIVDALRH 801

Query: 418 FSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVR 475
            + PE+L G   S  G    V+A K V I++L  +LILHL RF + ++  G+ K+ K V 
Sbjct: 802 LTNPESLRGDFNSPRGKD--VSATKQVFIESLPPVLILHLKRFQFDAEGNGTVKIWKKVG 859

Query: 476 FPLQLVLGRDLL 487
           +PL+L + R++L
Sbjct: 860 YPLELEIPREVL 871


>gi|350294724|gb|EGZ75809.1| cysteine proteinase [Neurospora tetrasperma FGSC 2509]
          Length = 1165

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 169/310 (54%), Gaps = 29/310 (9%)

Query: 199  LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
            L PRGL+N+GN+C++N+ LQ L++C PF   L ++  + +    +  P L A + F+ +F
Sbjct: 703  LEPRGLVNTGNMCYMNSILQVLVNCIPFYDFLDQVSKKAVHSFNSETPLLDAMIMFMREF 762

Query: 257  DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR--------QEDA 307
                        +S+  + R       E   + FTP+ V ++I   PR        Q+DA
Sbjct: 763  KVIDSA------VSIDQLKRRLKSEELEQYGEAFTPEFVYDAIRKLPRFASMRRGHQQDA 816

Query: 308  QEFLSFIMDQMHDELLKLQGE---STSINGANTALVSLAEE---DEWETVGPKNKSAVTR 361
            +EFL F+++ +HDE   +      ST+    N++L S       D+W  VGP+ K+A+TR
Sbjct: 817  EEFLGFLLEGLHDECTHVMSTLPVSTTSTAPNSSLPSPTASNTGDDWLEVGPRQKAAITR 876

Query: 362  TQSFLPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
            T  +  S   ++ IFGGQL+S ++  G K+S T++P+  L LDI +  V  I DALR  +
Sbjct: 877  TSGYSSSISPITRIFGGQLRSELRIPGLKSSVTLEPYQPLQLDIGAPEVRNIVDALRGLT 936

Query: 420  APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFP 477
             PE + G   S  G     T  K V I++L  +LILHL RF + ++  G+ K+ K V +P
Sbjct: 937  RPETIHGDFNSPHGKDAKAT--KQVFIESLPPVLILHLKRFQFDAEGHGTIKIWKKVGYP 994

Query: 478  LQLVLGRDLL 487
            L+L + R+++
Sbjct: 995  LELEIPREVV 1004


>gi|389628378|ref|XP_003711842.1| ubiquitin C-terminal hydrolase [Magnaporthe oryzae 70-15]
 gi|351644174|gb|EHA52035.1| ubiquitin C-terminal hydrolase [Magnaporthe oryzae 70-15]
          Length = 1024

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/312 (33%), Positives = 174/312 (55%), Gaps = 30/312 (9%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 256
           + PRGLIN+GN+C++N+ LQ L+ C+PF   L++   +      +  P + A + F+ DF
Sbjct: 567 IEPRGLINTGNMCYMNSVLQVLLFCTPFYDFLEQAGKKVTHSFNSETPLIDAMIEFMRDF 626

Query: 257 DTPSGGSS------KKKNISVLDIGRPFSPS-MFEAVLKNFTPDVPN-SISGRPRQEDAQ 308
                  S      + K+  +   G PF+P  ++EA+ K     +P  S   R  Q+DA+
Sbjct: 627 KIIDSAISVDQLRRRLKSEELEQYGEPFTPEFIYEAIRK-----LPRFSSMRRGHQQDAE 681

Query: 309 EFLSFIMDQMHDELLKLQGESTSINGANTALVSLAE---------EDEWETVGPKNKSAV 359
           EFL F ++ +HDE   +   +   +  +TA  S A+         +++W  VGP+ ++A+
Sbjct: 682 EFLGFFLESLHDECSHVMRAAGQQSITSTAPQSSAQTPTTSAPSVDNDWLEVGPRQRAAI 741

Query: 360 TRT--QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 417
           TR+   S + S ++ IFGG+L+S ++  G K S T++P+  L LDI +  V  I DALR 
Sbjct: 742 TRSSGHSDMSSPVTKIFGGELRSELRVPGLKDSVTLEPYQPLQLDIGAPQVRNIVDALRH 801

Query: 418 FSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVR 475
            + PE+L G   S  G    V+A K V I++L  +LILHL RF + ++  G+ K+ K V 
Sbjct: 802 LTNPESLRGDFNSPRGKD--VSATKQVFIESLPPVLILHLKRFQFDAEGNGTVKIWKKVG 859

Query: 476 FPLQLVLGRDLL 487
           +PL+L + R++L
Sbjct: 860 YPLELEIPREVL 871


>gi|330922068|ref|XP_003299682.1| hypothetical protein PTT_10730 [Pyrenophora teres f. teres 0-1]
 gi|311326539|gb|EFQ92222.1| hypothetical protein PTT_10730 [Pyrenophora teres f. teres 0-1]
          Length = 887

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 158/302 (52%), Gaps = 24/302 (7%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDT 258
           PRGL+N+GNLC++N+ LQ L+ C PF   L ++  R +   K+  P + A + F+ DF  
Sbjct: 431 PRGLVNTGNLCYMNSILQVLLFCVPFYDFLDQVAKRAVHSFKSETPLVDAMIMFLRDFKL 490

Query: 259 PSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
               ++      + K   +   G P +P     V+K   P   N   G+  QEDA+EFL 
Sbjct: 491 IDSAATVEQLRLRLKGNDLEQYGEPLTPEYVYDVIKRL-PRFDNMKRGQ--QEDAEEFLG 547

Query: 313 FIMDQMHDELLKLQGESTSINGANTALVSLAE-----EDEWETVGPKNKSAVTRTQSFL- 366
           F++  +HDE +++         A+T      E     +  WE VG K K+AVT+    + 
Sbjct: 548 FLLAGLHDECVQIIKTGKQSQSADTVTSPKTERSGSVDGGWEEVGHKQKTAVTQNSGAID 607

Query: 367 -PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
             S ++ IFGG+L+S  K  G KAS T++P+  L LDI  + ++ I DAL+  +  E L+
Sbjct: 608 IESPVTKIFGGKLRSEYKRPGEKASVTLEPYQPLQLDIGEQNINNISDALKNLTRLETLD 667

Query: 426 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRD 485
           G         G   + K V I+TL  +LILHL RF Y  +G  K+ K + +PL+L L ++
Sbjct: 668 G------AARGAKASTKQVHIETLPPVLILHLKRFHYDEKGPQKIWKKIGYPLELELPKE 721

Query: 486 LL 487
           + 
Sbjct: 722 VF 723


>gi|430812378|emb|CCJ30186.1| unnamed protein product [Pneumocystis jirovecii]
          Length = 522

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/312 (34%), Positives = 163/312 (52%), Gaps = 31/312 (9%)

Query: 192 PVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA--GYPTLTAF 249
           P K    L PRGLIN+GN+CF+N  LQ L  C PF  LL E+  + +  +      + A 
Sbjct: 135 PEKKHYVLQPRGLINTGNVCFMNVILQVLAFCPPFYNLLDEISKKMVNSSVNDVSLINAL 194

Query: 250 VGFVSDFDTPS----GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSI---SGRP 302
           + F+ +F   +     G+S+ K  ++ D G PF P      ++       N +     R 
Sbjct: 195 ISFIREFSVITQPVLNGTSQAKKQNIEDFGEPFIPEYVYIAMRG------NKLFDSMRRG 248

Query: 303 RQEDAQEFLSFIMDQMHDELL-KLQGEST--------SINGANTALVSLAEED----EWE 349
            QEDA+EFL  ++D +H+E L K++ +           +N  N    S   +D    EW 
Sbjct: 249 HQEDAEEFLGLLLDALHEEFLDKMKSDPVISSICTLNRMNCMNFTDFSDHSQDKNDNEWV 308

Query: 350 TVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVH 409
            VGPK K+++ R+ +   S L+ IF G  +S+++  G K S T++P+  L LDI    + 
Sbjct: 309 EVGPKQKTSIMRSANVSESPLTPIFTGNFRSILRVSGMKPSITLEPYRSLQLDIEPFHID 368

Query: 410 TIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST- 468
           +IE+AL+  + PE L G   SS G    + A K V I+TL ++LILHL RF Y + G T 
Sbjct: 369 SIEEALQNITQPEVLNGDWHSSLGEK--LKATKQVFIETLPQVLILHLKRFVYDNVGGTQ 426

Query: 469 KLHKSVRFPLQL 480
           K +K+V +PLQ 
Sbjct: 427 KSYKNVHYPLQF 438


>gi|392862091|gb|EAS37301.2| ubiquitin C-terminal hydrolase [Coccidioides immitis RS]
          Length = 892

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/307 (34%), Positives = 167/307 (54%), Gaps = 24/307 (7%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDT 258
           PRGL+N+GN+C++N+ LQ L+ C PF   L  +  R     K+  P L A + F+ +F  
Sbjct: 423 PRGLVNTGNMCYMNSVLQVLVFCVPFYDFLDRVSRRAAHSFKSELPLLDAMIMFMREFRV 482

Query: 259 PSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
               SS      + K   +   G  F P     V+++  P   +   G   Q+DAQEFL 
Sbjct: 483 IGSASSVEQLRQRLKQTELEQYGSSFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEFLG 539

Query: 313 FIMDQMHDELLKLQGESTSINGANTA----LVSLAEE---DEWETVGPKNKSAVTRTQSF 365
           F+ +++H+E L     S+++  A +A     VS+ ++   + W  VG K K+AVTR+   
Sbjct: 540 FLFEELHEECLHAIKSSSALPEAASASDVDAVSMTDDSAGEGWLEVGHKQKAAVTRSSGH 599

Query: 366 LPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 423
           + S   ++ IFGG L+S  +  GNK S T++P+  L LDI S  V+ I DAL+  + PE 
Sbjct: 600 IASESPITRIFGGNLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTRPET 659

Query: 424 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLV 481
           + G  +SS G    V A K V I++L  +LILHL RF Y S  +G+ K+ K + +PL+L 
Sbjct: 660 MHGDFSSSRGTK--VNATKQVFIESLPPVLILHLKRFHYDSVTKGTQKIWKKIGYPLELE 717

Query: 482 LGRDLLV 488
           + +++  
Sbjct: 718 IPKEVFA 724


>gi|303321950|ref|XP_003070969.1| Ubiquitin carboxyl-terminal hydrolase family protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240110666|gb|EER28824.1| Ubiquitin carboxyl-terminal hydrolase family protein [Coccidioides
           posadasii C735 delta SOWgp]
          Length = 892

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/307 (34%), Positives = 167/307 (54%), Gaps = 24/307 (7%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDT 258
           PRGL+N+GN+C++N+ LQ L+ C PF   L  +  R     K+  P L A + F+ +F  
Sbjct: 423 PRGLVNTGNMCYMNSILQVLVFCVPFYDFLDRVSRRAAHSFKSELPLLDAMIMFMREFRV 482

Query: 259 PSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
               SS      + K   +   G  F P     V+++  P   +   G   Q+DAQEFL 
Sbjct: 483 IGSASSVEQLRQRLKQTELEQYGSSFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEFLG 539

Query: 313 FIMDQMHDELLKLQGESTSINGANTA----LVSLAEE---DEWETVGPKNKSAVTRTQSF 365
           F+ +++H+E L     S+++  A +A     VS+ ++   + W  VG K K+AVTR+   
Sbjct: 540 FLFEELHEECLHAIKSSSALPEAASASDVDAVSMTDDSAGEGWLEVGHKQKAAVTRSSGH 599

Query: 366 LPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 423
           + S   ++ IFGG L+S  +  GNK S T++P+  L LDI S  V+ I DAL+  + PE 
Sbjct: 600 IASESPITRIFGGNLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTRPET 659

Query: 424 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLV 481
           + G  +SS G    V A K V I++L  +LILHL RF Y S  +G+ K+ K + +PL+L 
Sbjct: 660 MHGDFSSSRGTK--VNATKQVFIESLPPVLILHLKRFHYDSVTKGTQKIWKKIGYPLELE 717

Query: 482 LGRDLLV 488
           + +++  
Sbjct: 718 IPKEVFA 724


>gi|154304421|ref|XP_001552615.1| hypothetical protein BC1G_09086 [Botryotinia fuckeliana B05.10]
          Length = 880

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/315 (33%), Positives = 171/315 (54%), Gaps = 32/315 (10%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L+ C+PF   L ++  +     K+  P + A + F+ +F
Sbjct: 416 LEPRGLVNTGNMCYMNSVLQVLVFCTPFYDFLDQVSKKAAHSFKSQTPLIDAMIMFMREF 475

Query: 257 DTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS-GRPRQEDAQE 309
                  S      + K+  +   G  F+P     V++     +P  ++  R  Q+DA+E
Sbjct: 476 SVIDSAKSVEQLKMRLKDGELEQYGDSFTPDFVYDVMRR----LPRFVTMQRGHQQDAEE 531

Query: 310 FLSFIMDQMHDELLK-LQGESTSINGANTALVSLAE-------------EDEWETVGPKN 355
           FL F+++ +HDE +  ++   +S N A+T  +++               +D W+ VGPK 
Sbjct: 532 FLGFLLEGLHDECVHVMKSSESSKNSADTTPMNVPSSPISDTASRRGSVDDVWQQVGPKQ 591

Query: 356 KSAVTRTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIED 413
           K+A+TR+   +   S ++ IFGG L+S ++  G K S T++P+  L LDI S  +H I D
Sbjct: 592 KAAITRSSGTILTGSPVTKIFGGSLRSELRVPGLKDSITLEPYQPLQLDIGSPDIHNIVD 651

Query: 414 ALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHK 472
           ALR  +  E L G   S  G    VTA K V I+T+  +LILHL RF Y + G T K+ K
Sbjct: 652 ALRGLTHSEVLHGDFKSPKGPN--VTATKQVFIETVPPVLILHLKRFQYDNTGGTQKIWK 709

Query: 473 SVRFPLQLVLGRDLL 487
            V +PL+L L +++ 
Sbjct: 710 KVEYPLELELPKEVF 724


>gi|91092940|ref|XP_972197.1| PREDICTED: similar to CG32479 CG32479-PA [Tribolium castaneum]
 gi|270004786|gb|EFA01234.1| ubiquitin-specific protease [Tribolium castaneum]
          Length = 633

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 105/304 (34%), Positives = 156/304 (51%), Gaps = 22/304 (7%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLL---QELRTRDIPKAGYPTLTAFVGFVSD 255
           L PRGLIN  N C++N+ LQAL++C P   LL    E  T    +   P +     FV +
Sbjct: 256 LQPRGLINKSNYCYINSILQALLACPPVYNLLVGLSEQNTTAQKEKATPIIDGMCRFVKE 315

Query: 256 FD-TPSG--------GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
           F   P+G         + KK+   ++D   PF PS    +L     D+   + GR  QED
Sbjct: 316 FQHLPAGLRVNRRNDKNQKKEQGLMIDYDLPFEPSWIYKMLNGVRSDL-FLVEGR--QED 372

Query: 307 AQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ 363
           A+EFL  +++ ++DE+L   KL     +IN   +       + EW+ +GPKNK ++TR  
Sbjct: 373 AEEFLGCLLNGLNDEMLELMKLVKSDLTINKFESKTSDQDTDKEWQVMGPKNKGSITRQM 432

Query: 364 SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 423
            F+ + +S+IFGG LKS +   G+ ++  +QPF  L L+I  E V T+ +AL        
Sbjct: 433 EFVKTPISNIFGGFLKSRIHRTGDHSTYNIQPFFTLQLNI--EKVKTVREALEALVTKNQ 490

Query: 424 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLG 483
           LEG     T     V A + V ++ L  ILILHL  F +   G TK+ K++ FP+ L + 
Sbjct: 491 LEGVTNEKTNEE--VEAWQQVTLEELPVILILHLKCFDFKLDGCTKIVKALEFPIDLKID 548

Query: 484 RDLL 487
             LL
Sbjct: 549 SKLL 552


>gi|116197711|ref|XP_001224667.1| hypothetical protein CHGG_07011 [Chaetomium globosum CBS 148.51]
 gi|88178290|gb|EAQ85758.1| hypothetical protein CHGG_07011 [Chaetomium globosum CBS 148.51]
          Length = 915

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 108/311 (34%), Positives = 166/311 (53%), Gaps = 28/311 (9%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L+ C PF   L ++  +     K+  P + A V F+ +F
Sbjct: 482 LEPRGLVNTGNMCYMNSVLQVLIFCVPFFDFLDQVSKKATHSFKSDTPLVDAMVMFMREF 541

Query: 257 ---DTPSGGSSKKKNISVLDI---GRPFSPSMFEAVLKNFTPDVPNSIS-GRPRQEDAQE 309
              D+ +     KK +   +    G PF+P+     ++N    +P   S  R  QEDAQE
Sbjct: 542 KSIDSAASADQLKKRLKSEEYEKYGEPFTPAFVYEAIRN----LPRFASMRRGHQEDAQE 597

Query: 310 FLSFIMDQMHDE---LLKLQGESTSINGANTALVSLAEE-----DEWETVGPKNKSAVTR 361
           FL F+++ +HDE   +++    ST+     +   S A E     D+W  VGP+ +SAVTR
Sbjct: 598 FLGFLLEGLHDECAQVMRAAPNSTASTAPPSPTSSRANESVEGTDDWLEVGPRQRSAVTR 657

Query: 362 T--QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
           +   S   S ++ IFGG L+S  +  G K S T++P+  L LDI S  V  I DAL+  +
Sbjct: 658 SSGHSHTLSPINKIFGGHLRSEFRVPGKKNSVTLEPYQPLQLDIGSPEVRNIIDALKGLT 717

Query: 420 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY---GSQGSTKLHKSVRF 476
             E L G   S  G    V A K V I+++  +L+LHL RF +   G  G+ K+ K + +
Sbjct: 718 RSEVLHGDFNSPHGKD--VRATKQVFIESVPPVLVLHLKRFQFDAEGYGGTVKIWKKIGY 775

Query: 477 PLQLVLGRDLL 487
           PL+    R++L
Sbjct: 776 PLEFEFPREVL 786


>gi|449302518|gb|EMC98527.1| hypothetical protein BAUCODRAFT_66730 [Baudoinia compniacensis UAMH
           10762]
          Length = 516

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 104/305 (34%), Positives = 166/305 (54%), Gaps = 24/305 (7%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++++ LQ L+ C+PF   L ++R R +   K+  P + A + F+ DF
Sbjct: 49  LEPRGLVNTGNMCYMSSVLQILLFCTPFYHFLDQVRQRTVHSMKSDTPLVDAMIMFMRDF 108

Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
              +   S +      K   +   G P +P      +++  P   N   G   Q+DA+EF
Sbjct: 109 KVLASAESVEALRKTLKQEQLEQFGEPVTPEYVYEAVRDL-PRFQNMRRG--HQQDAEEF 165

Query: 311 LSFIMDQMHDELLKLQGEST--SINGANTALV--SLAEEDEWETVGPKNKSAVTRTQSF- 365
           L FI++ +HDE + +   ST     G  +  +  S +  D W  VGPK K++VTRT    
Sbjct: 166 LGFILECLHDECVTVMRSSTESQTEGVTSPSITASPSSADGWLEVGPKQKASVTRTAGHE 225

Query: 366 -LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 424
             PS ++ IFGG L+S ++  G K S T++P+  L LDI +  V+ I DAL+  +  E+L
Sbjct: 226 DAPSPITKIFGGHLRSELRVPGLKDSVTLEPYKPLQLDIGAAHVNNIVDALKGLTRTESL 285

Query: 425 EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            G      G  G + AKK V I T+  +L+LHL RF Y +   G+ K+ K + +PL+L +
Sbjct: 286 TG----EFGGRGNI-AKKQVFIDTVPPVLVLHLKRFQYENNLTGTQKIWKKIGYPLELEI 340

Query: 483 GRDLL 487
            +++ 
Sbjct: 341 PKEVF 345


>gi|196004276|ref|XP_002112005.1| hypothetical protein TRIADDRAFT_55609 [Trichoplax adhaerens]
 gi|190585904|gb|EDV25972.1| hypothetical protein TRIADDRAFT_55609 [Trichoplax adhaerens]
          Length = 624

 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 162/315 (51%), Gaps = 22/315 (6%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRT-----RDIPKAGYPTLTAFVGFVSD 255
           PRGL N  + CF+N+TLQ+L+ CSP  + L+++ +     + I     P +     FV+ 
Sbjct: 230 PRGLTNKASFCFINSTLQSLLVCSPIHRALRKIGSFPTLQQTIGDCRTPAINGMAAFVNQ 289

Query: 256 FDTPSGGSSKKKNISVLDIGR------PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQE 309
           FD       +K    +L  G+      PF P     +L    P    S++   RQEDA+E
Sbjct: 290 FDLLERQEYEKTFGKLLKAGKEVRFDNPFEPQCIYEMLAILRP----SMAKGERQEDAEE 345

Query: 310 FLSFIMDQMHDELLKLQGESTSINGANTALVSL----AEEDEWETVGPKNKSAVTRTQSF 365
           FL  ++D +H+E++ +  E +S +   +    +    + + EW+    K KSA++RT + 
Sbjct: 346 FLGCMLDNLHEEIVSISPEKSSASDQASCENDIDNINSGDGEWQQALSKKKSAISRTIAQ 405

Query: 366 LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
             S +S+ FGG+++S +K    K S T QPF  L LDI+   +  I+DA++     E +E
Sbjct: 406 NHSLISETFGGEIRSSIKYTNEKQSNTSQPFFTLQLDIHDSEISHIKDAIKKSMGSEQVE 465

Query: 426 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRD 485
            Y + + G    V A K +  + L KILILHL RF +      KL K V + LQL + ++
Sbjct: 466 HYISGNDGKKTKVEATKKMSFERLPKILILHLKRFIFDHGICQKLTKDVNYDLQLEIDKE 525

Query: 486 LLVTPSAEVLQFLNV 500
           LL   S E  Q LNV
Sbjct: 526 LL---SRECKQSLNV 537


>gi|367039059|ref|XP_003649910.1| hypothetical protein THITE_2109034 [Thielavia terrestris NRRL 8126]
 gi|346997171|gb|AEO63574.1| hypothetical protein THITE_2109034 [Thielavia terrestris NRRL 8126]
          Length = 958

 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 111/315 (35%), Positives = 164/315 (52%), Gaps = 32/315 (10%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L+ C PF   L ++        K+  P + A V F+ +F
Sbjct: 497 LEPRGLVNTGNMCYMNSVLQVLIFCIPFYDFLDQVNKNAAHSFKSETPLVDAMVMFMREF 556

Query: 257 ----DTPSGGSSKK--KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS-GRPRQEDAQE 309
                 PS    KK  K+      G PF+P      ++     +P   S  R  Q+DAQE
Sbjct: 557 KVIDSAPSVAQLKKRLKSEDYEKYGEPFTPEFVYDAIRT----LPRFASMRRGHQQDAQE 612

Query: 310 FLSFIMDQMHDELLKL------------QGESTSINGANTALVSLAEEDEWETVGPKNKS 357
           FL F+++ +HDE  ++               S     ++ A   L   D+W  VGP+ +S
Sbjct: 613 FLGFLLEGLHDECAQVMRAAPASTASTAPSSSLPSPTSSRANDPLEGGDDWLEVGPRQRS 672

Query: 358 AVTRT--QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDAL 415
           AVTR+   S  PS ++ IFGGQL+S ++  GNK S T++P+  L LDI S  +  I DAL
Sbjct: 673 AVTRSSGHSHTPSPVTKIFGGQLRSELRVPGNKNSVTLEPYQPLQLDIGSPEIRNIIDAL 732

Query: 416 RLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY---GSQGSTKLHK 472
           +  + PE L G   S  G    V A K V I+++  +LILHL RF +   G  G+ K+ K
Sbjct: 733 KGLTRPEVLHGDFNSPHGKD--VRATKQVFIESVPPVLILHLKRFQFDAEGYGGTVKIWK 790

Query: 473 SVRFPLQLVLGRDLL 487
            V +PL+    R++L
Sbjct: 791 KVGYPLEFEFPREVL 805


>gi|332017167|gb|EGI57966.1| Ubiquitin carboxyl-terminal hydrolase 10 [Acromyrmex echinatior]
          Length = 917

 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 111/323 (34%), Positives = 166/323 (51%), Gaps = 33/323 (10%)

Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK-----AGYPTLTA 248
           K    LLPRGL N  N C++N+ LQAL++C PF  LL  L    +PK     +  P +  
Sbjct: 523 KQTVSLLPRGLTNRSNYCYINSILQALLACPPFYNLLTAL---PLPKNRGRNSATPLIDN 579

Query: 249 FVGFVSDFD-------TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSIS 299
              FV +F         P     K+   +V+DI  G  F P+    +LK+ +     + S
Sbjct: 580 MGKFVREFTPLTEAARMPRKDRVKRGEDTVMDIYSGVAFEPAYVYTMLKHTS-----AFS 634

Query: 300 GRPRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETVGPKNK 356
              RQEDA+EFLS +++ ++DE+L   KL     +  G    + +  +E+EW+ +GPKNK
Sbjct: 635 VEGRQEDAEEFLSCLLNGINDEMLDVTKLINNDQNAIGNAKNISNDHDEEEWQVMGPKNK 694

Query: 357 SAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALR 416
            AVTR   F  + +SDIF GQL+S V   G + +  VQPF  L LD+  +   +++ AL 
Sbjct: 695 GAVTRCTEFERTPISDIFRGQLRSRVSRAGEQPTDNVQPFFTLQLDV--QKAESVKHALE 752

Query: 417 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG----SQGSTKLHK 472
           +    + +EG   S T     + A K V ++ L  ILILHL  F Y     S G +K+ K
Sbjct: 753 ILVGKDQVEGLTCSKTRQQ--IEAWKQVTLEELPVILILHLKWFVYKFDKYSNGCSKILK 810

Query: 473 SVRFPLQLVLGRDLLVTPSAEVL 495
           ++ FP+ L +    L   +A+ L
Sbjct: 811 TMEFPIDLKIDGKFLSPNTAKKL 833


>gi|327352557|gb|EGE81414.1| ubiquitin C-terminal hydrolase [Ajellomyces dermatitidis ATCC
           18188]
          Length = 932

 Score =  164 bits (416), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 107/305 (35%), Positives = 169/305 (55%), Gaps = 25/305 (8%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDT 258
           PRGL+N+GN+C++N+ LQ L+ C PF + L ++  R +   K+  P + A + F+ +F  
Sbjct: 455 PRGLLNTGNMCYMNSILQILVFCVPFYEFLDKIGRRAVHSFKSDLPLIDAMIMFMREFRV 514

Query: 259 PSGGSSKKK-----NISVLDI-GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
               +S +K       + L++ G  F P     V+++  P   +   G   Q+DAQEFL 
Sbjct: 515 IDAATSVEKLRLRLKQNELELYGESFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEFLG 571

Query: 313 FIMDQMHDELLKLQGESTSI-----NGANTALVSLAEE---DEWETVGPKNKSAVTRTQS 364
           F+++++HDE  +   ++TS             VS   E   + W  VG K K A+TR+  
Sbjct: 572 FLLEELHDECTQAVKQATSTASDISTAVEADFVSATSEPSVEGWLEVGHKQKPAITRSSG 631

Query: 365 FL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
            +   S ++ IFGG+L+S  +  GNK S T++P+  L LDI S  V+ I DAL+  + PE
Sbjct: 632 HISAESPITKIFGGKLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTKPE 691

Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQL 480
            ++G   SS G    VTA K V I++L  +LILHL RF Y   ++G+ K+ K V +PL+L
Sbjct: 692 TMQGDFNSSRGPK--VTATKQVFIESLPPVLILHLKRFQYDNVTKGTQKIWKKVGYPLEL 749

Query: 481 VLGRD 485
            L ++
Sbjct: 750 ELPKE 754


>gi|358058490|dbj|GAA95453.1| hypothetical protein E5Q_02107 [Mixia osmundae IAM 14324]
          Length = 837

 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 110/308 (35%), Positives = 159/308 (51%), Gaps = 27/308 (8%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG--YPTLTAFVGFVSDF 256
             PRGL+N+GNLCF N   Q+L+ C PF  L+  L        G   P + A + ++  F
Sbjct: 391 FYPRGLVNTGNLCFANTIFQSLLYCGPFYNLISLLGQETSSDLGGKTPLMEAMIVYLQLF 450

Query: 257 DTPSGGSSKKKNISVLDI----------GRPFSPSM-FEAVLKNFTPDVPNSISGRPRQE 305
                   ++  +S LD           G PF+P M ++A+  N   D       R  QE
Sbjct: 451 RI--MNRQEQDKLSALDASPPEPPTASDGEPFAPEMLYDAMKMNKRFDQ----MRRGLQE 504

Query: 306 DAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAE----EDEWETVGPKNKSAVTR 361
           DAQEFL + +D +H+E+L        + G  T   + A     +D W  VG K ++A TR
Sbjct: 505 DAQEFLGYFLDTLHEEVLSAIDRHDELLGNRTRQAAQASNAPADDGWLEVGNKGRTATTR 564

Query: 362 TQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
           + +   S ++ IFGG+L+SV++  G K S T++PFL L LDI    +HTIEDAL   S P
Sbjct: 565 SSATRESPITSIFGGRLRSVLRCPGQKDSVTLEPFLQLQLDIEEPGIHTIEDALIGLSQP 624

Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQL 480
           E L+ +   +T    VVTA K + ++ +  IL+LHL RFSY S G   K +K + + L L
Sbjct: 625 ELLQDF---ATQQGQVVTASKQLFLEAIPPILVLHLKRFSYTSAGGILKSNKIIGYDLDL 681

Query: 481 VLGRDLLV 488
            L   +L 
Sbjct: 682 DLPSAILA 689


>gi|340914994|gb|EGS18335.1| ubiquitin carboxyl-terminal hydrolase-like protein [Chaetomium
           thermophilum var. thermophilum DSM 1495]
          Length = 1016

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/311 (34%), Positives = 173/311 (55%), Gaps = 30/311 (9%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L+ C+PF   L ++  +     K+  P L   + F+ +F
Sbjct: 554 LEPRGLVNTGNMCYMNSVLQVLLFCTPFYDFLDQVSKKAAHSFKSETPLLDTMIMFMREF 613

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR--------QEDA 307
              +  S+ +       + +   P  +E     FTP+ V ++I   PR        Q+DA
Sbjct: 614 KAIASASTAEL------LRKRLRPEEYEKYGDPFTPEFVYDTIRKLPRFSSMRRGHQQDA 667

Query: 308 QEFLSFIMDQMHDELLKLQGE-----STSINGANTALVSLAEE-DEWETVGPKNKSAVTR 361
           QEFL F+++ +HDE  ++        ST+ N + ++  + AE  ++W  VGP+ +SA+TR
Sbjct: 668 QEFLGFLLEGLHDECSQVTRNVQSTVSTTANSSVSSPTAAAEGGNDWLEVGPRQRSAITR 727

Query: 362 TQSFLPSA--LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
           +  +  S+  ++ IFGGQL+S ++  GNK S T++P+  L LDI +  V TI DAL+  +
Sbjct: 728 SSGYSQSSSPITKIFGGQLRSELRVPGNKNSVTLEPYQPLQLDIGAPEVRTIIDALKGLT 787

Query: 420 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY---GSQGSTKLHKSVRF 476
            PE + G   S  G    V A K V I+++  +LILHL RF +   G  G+ K+ K V +
Sbjct: 788 HPEAIYGDFNSPRGKD--VRATKQVFIESVPPVLILHLKRFQFDAEGYGGTVKIWKKVGY 845

Query: 477 PLQLVLGRDLL 487
           PL+    R++L
Sbjct: 846 PLEFDFPREVL 856


>gi|384490748|gb|EIE81970.1| hypothetical protein RO3G_06675 [Rhizopus delemar RA 99-880]
          Length = 562

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/310 (35%), Positives = 164/310 (52%), Gaps = 39/310 (12%)

Query: 191 EPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPTLT 247
           EP  +   L PRGLIN+ N CF+N  LQ L  C PF  L++ + T+   +I K+  P L 
Sbjct: 196 EPTFNAPLLQPRGLINNVNTCFMNVILQPLSHCPPFYNLIKTISTKVAHNI-KSKTPLLD 254

Query: 248 AFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVL---KNFTPDVPNSISGRPRQ 304
           + + F+++F T       ++  S+   G PF P      L   K F        + R RQ
Sbjct: 255 SIIEFINEFQT-------ERLDSLEQYGEPFVPEYVYNALRGQKKFD-------TLRGRQ 300

Query: 305 EDAQEFLSFIMDQMHDELLKLQGESTSI-----NGANTALVSLAEEDEWETVGPKNKSAV 359
           ED++EFL F++D +H+E++ +  E  +      NG N         DEW  VG KNK++ 
Sbjct: 301 EDSEEFLCFLLDGLHEEMINVLKERETKRLEEDNGKN---------DEWLEVGAKNKTSN 351

Query: 360 TRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
            RT  F  S +S IFGG+++SV++  G K S  ++P+  L LDI  E VH++EDA+   +
Sbjct: 352 LRTTGFDESPISKIFGGKVRSVLRCPGAKDSINLEPYQSLPLDIQPENVHSVEDAIANMT 411

Query: 420 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPL 478
            PE +  Y TS  G    V A K V  + L  +LILH+ RF + + G   KL K V +  
Sbjct: 412 LPEIMHDY-TSPKGLK--VEATKQVYFEKLPSVLILHMKRFVFDNVGGVQKLSKRVSYGS 468

Query: 479 QLVLGRDLLV 488
           QLV+  + +V
Sbjct: 469 QLVIDPEWMV 478


>gi|240273779|gb|EER37298.1| ubiquitin-specific protease [Ajellomyces capsulatus H143]
          Length = 739

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 165/307 (53%), Gaps = 25/307 (8%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDT 258
           PRGL+N+GN+C++N+ LQ L+ C PF + L ++  R +   K+  P + A + F+ +F  
Sbjct: 262 PRGLVNTGNMCYMNSVLQILVFCVPFYEFLDKIGRRAVHTFKSDLPLIDAMIMFMREFRV 321

Query: 259 PSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
               +S      + K   +   G  F P     V+++  P   +   G   Q+DAQEFL 
Sbjct: 322 IDAATSVEQLRLRLKQNELEQYGESFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEFLG 378

Query: 313 FIMDQMHDELLKLQGE--------STSINGANTALVSLAEEDEWETVGPKNKSAVTRTQS 364
           F+++++HDE  +   +        ST +   + +  S    + W  VG K + A+TR+  
Sbjct: 379 FLLEELHDECTQAAKQVSSTGSDISTPVETDSASAASELSVEGWLEVGHKQRPAITRSSG 438

Query: 365 FL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
            +   S ++ IFGG+L+S  +  GNK S T++P+  L LDI S  V  I DAL+  + PE
Sbjct: 439 HISAESPITKIFGGKLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVINIIDALKGLTKPE 498

Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQL 480
            ++G   SS G    VTA K V I+ L  +LILHL RF Y   ++G+ K+ K V +PL+L
Sbjct: 499 TIQGDFNSSRGPK--VTATKQVFIENLPPVLILHLKRFQYDNVTKGTQKIWKKVGYPLEL 556

Query: 481 VLGRDLL 487
            L +++ 
Sbjct: 557 ELPKEVF 563


>gi|258569845|ref|XP_002543726.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237903996|gb|EEP78397.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 886

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/306 (33%), Positives = 165/306 (53%), Gaps = 24/306 (7%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDT 258
           PRGL+N+GN+C++N+ LQ L+ C PF   L  +  R     K+  P L A + F+ +F  
Sbjct: 418 PRGLVNTGNMCYMNSILQVLIFCVPFYDFLDRISRRAAHSFKSELPFLDAMIMFMREFRV 477

Query: 259 PSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
               +S      + K   +   G  F P     V+++  P   +   G   Q+DAQEFL 
Sbjct: 478 IDSATSVEQLRLRLKQNELEQYGASFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEFLG 534

Query: 313 FIMDQMHDELLKLQ------GESTSINGAN-TALVSLAEEDEWETVGPKNKSAVTRTQSF 365
           F+ +++H+E L          E+ S+N  + T++   +  + W  VG K K AVTR+   
Sbjct: 535 FLFEELHEECLHAMKSSATTSETASVNDVDATSMTDDSTTEGWLEVGHKQKPAVTRSAGH 594

Query: 366 LP--SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 423
           +   S ++ IFGG+++S  +  GNK S T++P+  L LDI S  V+ I DAL+  + PE 
Sbjct: 595 IAAESPITKIFGGKIRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTRPET 654

Query: 424 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQLV 481
           + G  +SS G     TA K V I++L  +LILHL RF Y   ++G+ K+ K V +PL+L 
Sbjct: 655 MHGDFSSSRGTKA--TATKQVFIESLPPVLILHLKRFQYDNVTKGTQKIWKKVGYPLELE 712

Query: 482 LGRDLL 487
           + +++ 
Sbjct: 713 IPKEVF 718


>gi|212538153|ref|XP_002149232.1| ubiquitin hydrolase, putative [Talaromyces marneffei ATCC 18224]
 gi|210068974|gb|EEA23065.1| ubiquitin hydrolase, putative [Talaromyces marneffei ATCC 18224]
          Length = 861

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/301 (35%), Positives = 159/301 (52%), Gaps = 19/301 (6%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L  C PF Q L  +  R     K+  P + A + F+ +F
Sbjct: 401 LEPRGLVNTGNMCYMNSVLQILAFCVPFYQFLDYIGHRATHSFKSDVPLIDATIMFMREF 460

Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
                  S+       K+  + + G  F P     V++   P   +   G   Q+DAQEF
Sbjct: 461 RVIDAACSEDQLRMRLKHKELEEYGEAFIPEFVYEVIRQL-PRFRDMRRGH--QQDAQEF 517

Query: 311 LSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL--PS 368
           L F ++++H+E        T    A++   S  E   W  VG K KSA+TR+   +   S
Sbjct: 518 LGFFLEELHEECAHALQSGTMQANADSGEPS--EASGWLEVGHKQKSAITRSSGDVDFES 575

Query: 369 ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYR 428
            ++ IFGG+++S  K  GNK S T++P+  L LDI S  V+ I DAL+  + PE L G  
Sbjct: 576 PITKIFGGKIRSEFKVPGNKNSVTLEPYQPLQLDIGSPEVNNIIDALKGLTKPETLHGDF 635

Query: 429 TSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVLGRDL 486
           +S  G    V A K V I+TL  +LILHL RF Y S   G+ K+ K V +PL+L + R++
Sbjct: 636 SSPRGPK--VAATKQVFIETLPPVLILHLKRFQYDSVTHGTQKIWKKVGYPLELEIPREV 693

Query: 487 L 487
            
Sbjct: 694 F 694


>gi|453080075|gb|EMF08127.1| cysteine proteinase [Mycosphaerella populorum SO2202]
          Length = 920

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/307 (34%), Positives = 166/307 (54%), Gaps = 26/307 (8%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L+ C PF   L ++  R +   K+  P + A + F+ +F
Sbjct: 452 LEPRGLVNTGNMCYMNSILQVLVFCVPFYNFLDQVAKRTVHSMKSDTPLVDAMIMFMKEF 511

Query: 257 DTPSGGSSKKKNISVL------DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
              +  +S     S+L        G   +P     V++N +    N   G   Q+DA+EF
Sbjct: 512 KPLATAASADAVRSLLKQEQLEQYGDSVTPDYVYEVIRNLS-RFANMRRG--HQQDAEEF 568

Query: 311 LSFIMDQMHDELLKLQ----GESTSINGANT--ALVSLAEEDEWETVGPKNKSAVTRT-- 362
           L F+++++HDE +K+      +    NGA +   ++S +  D W  VGPK KS +TRT  
Sbjct: 569 LGFLLEELHDECVKVMLGQTEQQPQTNGAASPETVLSPSSADGWLEVGPKQKSVITRTTG 628

Query: 363 QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
           Q  + S ++ IF GQ ++  +  G K S T++P+  L LDI  E V  I DAL+  +  E
Sbjct: 629 QQDIASPITRIFAGQTRAEFRVPGQKDSVTLEPYKPLQLDIGGEHVSNIVDALKGLTNTE 688

Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQL 480
            L G      GN    TAKK + I+TL  +LILHL RF Y S  + + K+ K V +PL+L
Sbjct: 689 TLTG-EFGGRGN----TAKKQMFIETLPPVLILHLKRFEYNSSTKATQKIWKKVGYPLEL 743

Query: 481 VLGRDLL 487
            + +++ 
Sbjct: 744 QIPKEVF 750


>gi|242807459|ref|XP_002484960.1| ubiquitin C-terminal hydrolase, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218715585|gb|EED15007.1| ubiquitin C-terminal hydrolase, putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 861

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/302 (35%), Positives = 162/302 (53%), Gaps = 20/302 (6%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L  C PF Q L  +  R     K+  P + A + F+ +F
Sbjct: 400 LEPRGLVNTGNMCYMNSVLQILAFCVPFYQFLDHIGHRATHSFKSDVPLIDATIMFMREF 459

Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
                  S+       K+  + + G  F P     V++   P   +   G   Q+DAQEF
Sbjct: 460 RVIDAAKSEDQLRMRLKHKELEEYGDAFIPEYVYDVIRQL-PRFRDMRRGH--QQDAQEF 516

Query: 311 LSFIMDQMHDELLK-LQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP-- 367
           L F ++++H+E    LQ  +   + A +   + +E D W  VG K KSA+TR+   +   
Sbjct: 517 LGFFLEELHEECAHALQSGAPQSSAAPSE--NSSEADGWLEVGHKQKSAITRSSGDVEFE 574

Query: 368 SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY 427
           S ++ IFGG+++S  K  GNK S T++P+  L LDI S  V  I DAL+  + PE + G 
Sbjct: 575 SPITKIFGGKIRSEFKVPGNKNSVTLEPYQPLQLDIGSPEVSNIIDALKGLTKPETIHGD 634

Query: 428 RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVLGRD 485
            +S  G    V A K V I+TL  +LILHL RF Y S   G+ K+ K V +PL+L + R+
Sbjct: 635 FSSPRGPK--VAATKQVFIETLPPVLILHLKRFQYDSVTHGTQKIWKKVGYPLELEIPRE 692

Query: 486 LL 487
           + 
Sbjct: 693 VF 694


>gi|400594709|gb|EJP62542.1| ubiquitin carboxyl-terminal hydrolase [Beauveria bassiana ARSEF
           2860]
          Length = 810

 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 110/315 (34%), Positives = 170/315 (53%), Gaps = 25/315 (7%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           L PRGLIN+GN+C++N+ LQ LM CSPF   L ++  R     K+  P L A + F+ ++
Sbjct: 361 LEPRGLINTGNMCYMNSVLQVLMFCSPFYDFLDQISKRAAHSFKSETPLLDAMIMFMHEY 420

Query: 257 ----DTPSGGSSKK--KNISVLDIGRPFSPS-MFEAVLKNFTPDVPNSIS-GRPRQEDAQ 308
                 P+    +K  +   +   G PF+P  ++EA+ +     +P   S  R  Q+DA+
Sbjct: 421 RVLKSAPTNEQLRKSIRGEEIERYGEPFTPEFVYEAIRQ-----LPRFASMRRGHQQDAE 475

Query: 309 EFLSFIMDQMHDELLKLQGESTSI----NGANTALV--SLAEEDEWETVGPKNKSAVTRT 362
           EFL F++  + DE   +   ++       G+ TA    S     +W  VG K ++AVTR+
Sbjct: 476 EFLGFLLQSLDDECTNVMNNASQTASQAAGSETASADGSTDPSGDWLEVGRKQRAAVTRS 535

Query: 363 Q-SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
             S   + ++ +FGG L+S  +  G K S T +P+  L LDI S  +  + DALR  + P
Sbjct: 536 SGSNTSTPVTKVFGGLLRSEFRVPGLKDSITTEPYQPLQLDIGSPEIRNVVDALRGLTRP 595

Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ-GSTKLHKSVRFPLQL 480
           E L+G   S  G    +TA K V I+TL  +LILHL RF + ++ G+TK+ K+V +PL L
Sbjct: 596 ERLQGDFNSPRGKD--ITATKQVFIETLPPVLILHLKRFQFDAEGGTTKIWKNVGYPLDL 653

Query: 481 VLGRDLLVTPSAEVL 495
            + R+ L   S + L
Sbjct: 654 EIPREALSRQSRQSL 668


>gi|225555478|gb|EEH03770.1| ubiquitin-specific protease [Ajellomyces capsulatus G186AR]
          Length = 947

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 165/307 (53%), Gaps = 25/307 (8%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDT 258
           PRGL+N+GN+C++N+ LQ L+ C PF + L ++  R +   K+  P + A + F+ +F  
Sbjct: 470 PRGLVNTGNMCYMNSVLQILVFCVPFYEFLDKIGRRAVHTFKSDLPLIDAMIMFMREFRV 529

Query: 259 PSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
               +S      + K   +   G  F P     V+++  P   +   G   Q+DAQEFL 
Sbjct: 530 IDAATSVEQLRLRLKQNELEQYGESFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEFLG 586

Query: 313 FIMDQMHDELLKLQGE--------STSINGANTALVSLAEEDEWETVGPKNKSAVTRTQS 364
           F+++++HDE  +   +        ST +   + +  S    + W  VG K + A+TR+  
Sbjct: 587 FLLEELHDECTQAAKQVSSTGSDISTPVETDSASAASELSVEGWLEVGHKQRPAITRSSG 646

Query: 365 FL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
            +   S ++ IFGG+L+S  +  GNK S T++P+  L LDI S  V  I DAL+  + PE
Sbjct: 647 HISVESPITKIFGGKLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVINIIDALKGLTKPE 706

Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQL 480
            ++G   SS G    VTA K V I+ L  +LILHL RF Y   ++G+ K+ K V +PL+L
Sbjct: 707 TIQGDFNSSRGPK--VTATKQVFIENLPPVLILHLKRFQYDNVTKGTQKIWKKVGYPLEL 764

Query: 481 VLGRDLL 487
            L +++ 
Sbjct: 765 ELPKEVF 771


>gi|325094789|gb|EGC48099.1| ubiquitin-specific protease [Ajellomyces capsulatus H88]
          Length = 924

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 165/307 (53%), Gaps = 25/307 (8%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDT 258
           PRGL+N+GN+C++N+ LQ L+ C PF + L ++  R +   K+  P + A + F+ +F  
Sbjct: 447 PRGLVNTGNMCYMNSVLQILVFCVPFYEFLDKIGRRAVHTFKSDLPLIDAMIMFMREFRV 506

Query: 259 PSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
               +S      + K   +   G  F P     V+++  P   +   G   Q+DAQEFL 
Sbjct: 507 IDAATSVEQLRLRLKQNELEQYGESFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEFLG 563

Query: 313 FIMDQMHDELLKLQGE--------STSINGANTALVSLAEEDEWETVGPKNKSAVTRTQS 364
           F+++++HDE  +   +        ST +   + +  S    + W  VG K + A+TR+  
Sbjct: 564 FLLEELHDECTQAAKQVSSTGSDISTPVETDSASAASELSVEGWLEVGHKQRPAITRSSG 623

Query: 365 FL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
            +   S ++ IFGG+L+S  +  GNK S T++P+  L LDI S  V  I DAL+  + PE
Sbjct: 624 HISAESPITKIFGGKLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVINIIDALKGLTKPE 683

Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQL 480
            ++G   SS G    VTA K V I+ L  +LILHL RF Y   ++G+ K+ K V +PL+L
Sbjct: 684 TIQGDFNSSRGPK--VTATKQVFIENLPPVLILHLKRFQYDNVTKGTQKIWKKVGYPLEL 741

Query: 481 VLGRDLL 487
            L +++ 
Sbjct: 742 ELPKEVF 748


>gi|328786677|ref|XP_001122220.2| PREDICTED: hypothetical protein LOC726488 [Apis mellifera]
          Length = 878

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 112/311 (36%), Positives = 155/311 (49%), Gaps = 44/311 (14%)

Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK--AGYPTLTAFVG 251
           K    LLPRGL N  N C++N+ LQAL++C PF  LL  L     P   +  P +   + 
Sbjct: 512 KQTVSLLPRGLTNRSNYCYINSILQALLACPPFYNLLMALPHSKNPSKMSSTPLIDNMIK 571

Query: 252 FVSDFDTPSGGS--------SKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISGR 301
           FV +F   S G+        +K+    V+DI  G  F P     +LKN +     S+ GR
Sbjct: 572 FVHEFTPLSDGARLARKDRANKRGEDIVVDIQSGVAFEPFYVYTMLKNTSAAGVFSVEGR 631

Query: 302 PRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTR 361
             QEDA+EFLS +++ ++DE+L                         E +GPKNK ++TR
Sbjct: 632 --QEDAEEFLSCLLNGINDEML-------------------------EVMGPKNKGSITR 664

Query: 362 TQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
              F  + LSDIF GQL+S V   G + +  VQPF  L LDI  E   +++ AL +    
Sbjct: 665 CTEFGRTPLSDIFRGQLRSRVSRAGEQPTDNVQPFFTLQLDI--EKAESVKGALEILVGK 722

Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLV 481
           + LEG   S T     + A K V ++ L  ILILHL  F Y   G +K+ KSV FP+ L 
Sbjct: 723 DQLEGMTCSKTKQQ--IEAWKQVTLEELPVILILHLKWFDYKLDGCSKIVKSVEFPIDLK 780

Query: 482 LGRDLLVTPSA 492
           L    L +P+A
Sbjct: 781 LDSKFL-SPNA 790


>gi|401883681|gb|EJT47877.1| ubiquitin-specific protease [Trichosporon asahii var. asahii CBS
           2479]
          Length = 1047

 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 113/324 (34%), Positives = 170/324 (52%), Gaps = 36/324 (11%)

Query: 191 EPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPTLT 247
            P  +   ++PRGLIN+GN+CF N  LQ L  C+PF +L +EL  R   D+ +   P L 
Sbjct: 644 RPAGAPAPIVPRGLINTGNMCFANTILQVLRYCTPFTELFEELGKRLKADLARRT-PLLE 702

Query: 248 AFVGFVSDFDTPSGGSSKKKNISVLDIGRP----FSP-SMFEAVLKNFTPDVPNSISGRP 302
           A V F+ +F    G S+   N +    G+     F P ++++A+ +N   D       R 
Sbjct: 703 AMVVFLREFA--PGPSTNGSNGTSTPKGKARDNAFIPENVYDAMKENKRFDT----MRRG 756

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQ---------GESTSINGANTALVSLA--------EE 345
            QEDA+E+L F ++ +H+ELL L           +S + NG +   +           ++
Sbjct: 757 YQEDAEEYLGFFLNTLHEELLDLYSRTAPAKPVAKSAAANGDSERTIDRPVSPTGRRNDD 816

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           D+W  VG K K+ V RT     S++S IFGG L+SV+   G+K S T++P+  L LDI +
Sbjct: 817 DDWLEVGKKQKTHVVRTAETRESSVSRIFGGSLRSVLHTPGSKDSVTLEPYQPLQLDIQA 876

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ 465
             VHT+ DALR  + PE + G   S+  NA  V A K V ++TL  +LILHL RF Y  Q
Sbjct: 877 NEVHTLVDALRHLNEPETVPGV-WSAARNAN-VDATKQVYLETLPPVLILHLKRFVYDPQ 934

Query: 466 GS--TKLHKSVRFPLQLVLGRDLL 487
                K  K V +  +L +  +++
Sbjct: 935 EQNVVKRSKPVAYSTELTIPAEII 958


>gi|345564452|gb|EGX47415.1| hypothetical protein AOL_s00083g508 [Arthrobotrys oligospora ATCC
           24927]
          Length = 849

 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 110/307 (35%), Positives = 166/307 (54%), Gaps = 30/307 (9%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP---KAGYPTLTAFVGFVSDFD 257
           PRGLIN+GN+CF+N+ LQAL+ C PF   L  + +R +    K   P + A + F+ +F 
Sbjct: 439 PRGLINTGNMCFMNSILQALLFCGPFFLFLDAV-SRKVAHNFKNETPLIDAMIMFMREFR 497

Query: 258 TPSGGSSKKKNISVLDI---GRPFSPS-MFEAV--LKNFTPDVPNSISGRPRQEDAQEFL 311
             + GS    +  + D+   G PF P  ++EAV  LK F      S   R  Q+DA+EFL
Sbjct: 498 RVTPGSLLSSDSPISDMTLSGDPFVPEYVYEAVKGLKRF------SSMRRGHQQDAEEFL 551

Query: 312 SFIMDQMHDELLKL--------QGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ 363
           +F +D +H+E +          QG +   N  +TA  S  ++  W  VG K K+ +TR  
Sbjct: 552 NFFLDVLHEECVAAIKSGEGSKQGSAAHPN--HTATPSQEDDSGWLEVGHKQKTTITRNI 609

Query: 364 SFLP--SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
             +   S ++ IFGGQ+++ ++  G ++S   +P+  L LDI +  +H+I DALR  S P
Sbjct: 610 GHISGISPVTKIFGGQMRNELRISGQRSSVMREPYQSLQLDIQNSNIHSIVDALRQISIP 669

Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQL 480
           E L+G    S   A   +A K   I +L  +LILHL RF Y + G T K+ KS+ +PL L
Sbjct: 670 EQLQGGDFKSARGAS-ASATKQAFIDSLPPVLILHLKRFQYNNTGGTQKIWKSIGYPLDL 728

Query: 481 VLGRDLL 487
            +  + L
Sbjct: 729 EIPSEAL 735


>gi|388578790|gb|EIM19126.1| cysteine proteinase [Wallemia sebi CBS 633.66]
          Length = 444

 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/286 (37%), Positives = 154/286 (53%), Gaps = 27/286 (9%)

Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA--GYPTLTAFVG 251
           KS + L  RGLIN GNLCF NA  Q+L+ C PF QL  +L  R++P +    P L A + 
Sbjct: 68  KSPQLLELRGLINQGNLCFANAIFQSLVFCQPFYQLFIQL-GRELPFSFNKTPLLDATIM 126

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRP--RQEDAQE 309
           F+++F        +      L  G PF+P+     +K +     N  S     +QEDA+E
Sbjct: 127 FLNEFRVLDDDDIQ------LQTGEPFTPTSIYDAMKTY-----NRFSQIQLGQQEDAEE 175

Query: 310 FLSFIMDQMHDELLKLQGE-----STSINGANTALVSLAE----EDEWETVGPKNKSAVT 360
           FL F +D +H+ELL +         T+++     L+   +    +D W  VG KNK+  T
Sbjct: 176 FLGFFLDTLHEELLSISPRLKPRTGTTLHEWFDGLLPTDQPAQADDGWLEVGHKNKTLST 235

Query: 361 RTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
           ++ +   S L+ +FGG+ +SV+K  G K S T++PF  L LDI  + +HTIEDAL   + 
Sbjct: 236 KSTNTQESPLTKMFGGKFRSVLKTPGQKDSITLEPFQPLQLDIQPDNIHTIEDALINLAQ 295

Query: 421 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG 466
           PE + G  +SS    G V A+K V I T   ILI+HL RF Y S G
Sbjct: 296 PETIHGVHSSS--KQGPVDARKQVTIDTCPPILIIHLKRFLYDSIG 339


>gi|119196183|ref|XP_001248695.1| hypothetical protein CIMG_02466 [Coccidioides immitis RS]
          Length = 893

 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 107/308 (34%), Positives = 167/308 (54%), Gaps = 25/308 (8%)

Query: 201 PRGLINSGNLCFLNA-TLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFD 257
           PRGL+N+GN+C++N+  LQ L+ C PF   L  +  R     K+  P L A + F+ +F 
Sbjct: 423 PRGLVNTGNMCYMNSQVLQVLVFCVPFYDFLDRVSRRAAHSFKSELPLLDAMIMFMREFR 482

Query: 258 TPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 311
                SS      + K   +   G  F P     V+++  P   +   G   Q+DAQEFL
Sbjct: 483 VIGSASSVEQLRQRLKQTELEQYGSSFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEFL 539

Query: 312 SFIMDQMHDELLKLQGESTSINGANTA----LVSLAEE---DEWETVGPKNKSAVTRTQS 364
            F+ +++H+E L     S+++  A +A     VS+ ++   + W  VG K K+AVTR+  
Sbjct: 540 GFLFEELHEECLHAIKSSSALPEAASASDVDAVSMTDDSAGEGWLEVGHKQKAAVTRSSG 599

Query: 365 FLPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
            + S   ++ IFGG L+S  +  GNK S T++P+  L LDI S  V+ I DAL+  + PE
Sbjct: 600 HIASESPITRIFGGNLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTRPE 659

Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQL 480
            + G  +SS G    V A K V I++L  +LILHL RF Y S  +G+ K+ K + +PL+L
Sbjct: 660 TMHGDFSSSRGTK--VNATKQVFIESLPPVLILHLKRFHYDSVTKGTQKIWKKIGYPLEL 717

Query: 481 VLGRDLLV 488
            + +++  
Sbjct: 718 EIPKEVFA 725


>gi|406867893|gb|EKD20930.1| putative ubiquitin carboxyl-terminal hydrolase 10 [Marssonina
           brunnea f. sp. 'multigermtubi' MB_m1]
          Length = 852

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/317 (35%), Positives = 170/317 (53%), Gaps = 34/317 (10%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L+ C+PF   L ++  R     K+  P + A + F+ +F
Sbjct: 396 LKPRGLVNTGNMCYMNSVLQVLIFCTPFFSFLDQVSKRAAHNFKSETPLIDAMILFLQEF 455

Query: 257 DTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
                  S      + K   +   G PF+P     V+ N  P    S   R  Q+DA+EF
Sbjct: 456 PVIDSAKSVEQLKMRLKEGDLEQYGDPFTPDFVYNVI-NRLPRF--SSMRRGHQQDAEEF 512

Query: 311 LSFIMDQMHDE-LLKLQGESTSIN----------------GANTALVSLAEEDEWETVGP 353
           L F+++ +HDE +L ++  S++ N                G+    VS A+E+ W  VGP
Sbjct: 513 LGFLLEGLHDECVLAMRNGSSNTNSAIATPNGPSSPVSETGSTQGSVS-AKENGWLEVGP 571

Query: 354 KNKSAVTRTQSFLP--SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTI 411
           K K+AVTR+   +   S ++ IFGG L+S ++  G K S T++P+  L LDI +  V+ I
Sbjct: 572 KQKAAVTRSSGTISTGSPVTKIFGGNLRSELRVPGLKDSVTLEPYQPLQLDIGAPNVNNI 631

Query: 412 EDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KL 470
            DAL+  +  E L G   S  G    VTA K V I+TL  +LILHL RF Y + G T K+
Sbjct: 632 VDALKGLTRSEVLHGDFKSPKGPN--VTATKQVFIETLPPVLILHLKRFQYDNAGGTQKI 689

Query: 471 HKSVRFPLQLVLGRDLL 487
            K V +PL+L + +++ 
Sbjct: 690 WKKVGYPLELEIPKEVF 706


>gi|171694367|ref|XP_001912108.1| hypothetical protein [Podospora anserina S mat+]
 gi|170947132|emb|CAP73937.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1020

 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/316 (32%), Positives = 167/316 (52%), Gaps = 35/316 (11%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           + PRGL+N+GN+C++N+ LQ L+ C PF   L ++  +     K+  P + A + F+ +F
Sbjct: 565 IEPRGLVNTGNMCYMNSVLQVLIFCIPFYDFLDQVSKKATHSFKSETPLIDALIMFMREF 624

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR--------QEDA 307
                 +S         + R   P   E   ++FTP+ V  +I   PR        Q+DA
Sbjct: 625 KIIDSATSTDL------LQRRLKPEELEQYGESFTPEFVYEAIRKLPRFASMRRGHQQDA 678

Query: 308 QEFLSFIMDQMHDELLKLQ------GESTSINGANTALV------SLAEEDEWETVGPKN 355
           QEFL F+++ +HDE  ++         ST+ N   ++        SL   D+W  VGP+ 
Sbjct: 679 QEFLGFLLEGLHDECAQVMRTAPVSAVSTAPNSTPSSPTTSKPNGSLEGADDWLEVGPRQ 738

Query: 356 KSAVTRTQSF-LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDA 414
           ++AVTR+    L S ++ IFGG+L+S ++  GNK S T++P+  L LDI +  +  I DA
Sbjct: 739 RAAVTRSSGHSLASPINKIFGGKLRSELRVPGNKTSVTLEPYEPLQLDIGAPEIRNIIDA 798

Query: 415 LRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY---GSQGSTKLH 471
           L+  + PE L G   S  G    V A K + I+++  +LILHL RF +   G  G+ K+ 
Sbjct: 799 LKGLTRPETLHGDFNSPHGKN--VKATKQIFIESVPPVLILHLKRFQFDAEGQGGTVKIW 856

Query: 472 KSVRFPLQLVLGRDLL 487
           K + +PL+    +++L
Sbjct: 857 KKIGYPLEFEFPQEVL 872


>gi|156055008|ref|XP_001593428.1| hypothetical protein SS1G_04855 [Sclerotinia sclerotiorum 1980]
 gi|154702640|gb|EDO02379.1| hypothetical protein SS1G_04855 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 885

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/317 (34%), Positives = 166/317 (52%), Gaps = 36/317 (11%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L+ C+PF   L ++  +     K+  P + A + F+ +F
Sbjct: 409 LEPRGLVNTGNMCYMNSVLQVLVFCTPFYDFLDQVSKKAAHSFKSETPLIDAMIMFMREF 468

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR-PR--------QEDA 307
                  S ++    L  G        E    +FTPD    +  R PR        Q+DA
Sbjct: 469 PVIDSAKSVEQLKMRLKEGE------LEQYGDSFTPDFVYDVMRRLPRFVTMQRGHQQDA 522

Query: 308 QEFLSFIMDQMHDELL---------KLQGESTSINGANTALVSLAE-----EDEWETVGP 353
           +EFL F+++ +HDE +         K    +T +N  ++     A      +D W+ VGP
Sbjct: 523 EEFLGFLLEGLHDECVHVMKSSDSSKTPAATTPMNAPSSPTSDSASRRGSIDDVWQQVGP 582

Query: 354 KNKSAVTRTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTI 411
           K K+A+TR+   +   S ++ IFGG L+S ++  G K S T++P+  L LDI S  +H I
Sbjct: 583 KQKAAITRSSGTILTGSPVTKIFGGSLRSELRVPGLKDSITLEPYQPLQLDIGSPNIHNI 642

Query: 412 EDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KL 470
            DAL+  +  E L G   S  G    VTA K V I+T+  +LILHL RF Y + G T K+
Sbjct: 643 IDALKGLTHSEVLHGDFKSPKGPN--VTATKQVFIETVPPVLILHLKRFQYDNTGGTQKI 700

Query: 471 HKSVRFPLQLVLGRDLL 487
            K V +PL+L L +++ 
Sbjct: 701 WKKVGYPLELELPKEVF 717


>gi|402909222|ref|XP_003917322.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Papio anubis]
          Length = 926

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/323 (33%), Positives = 167/323 (51%), Gaps = 52/323 (16%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 245
           I++PV     L PRGLIN GN C++NATLQAL++C P   L++   L ++   P    P 
Sbjct: 551 IHKPV----SLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 606

Query: 246 LTAFVGFVSDFD---TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 300
           + +FV  +++F     P        +  V DI  G  F P+    +L        +S+S 
Sbjct: 607 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 662

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 345
           + RQEDA+E+L FI++ +H+E+L L+                ++ S+            E
Sbjct: 663 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPQNHSVTEEEQEEQGEGSE 722

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 405
           DEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K SAT+QPF  L L    
Sbjct: 723 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQL---- 778

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 464
                         A E+++GY T +      V   + V ++ L  +L+LHL RF Y  +
Sbjct: 779 -------------VARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 822

Query: 465 QGSTKLHKSVRFPLQLVLGRDLL 487
            G  KL K++ +P+ L + ++LL
Sbjct: 823 GGCQKLIKNIEYPVDLEISKELL 845


>gi|449684800|ref|XP_002158653.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-A-like, partial
           [Hydra magnipapillata]
          Length = 382

 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/308 (33%), Positives = 160/308 (51%), Gaps = 15/308 (4%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRT---RDIPKAGYPTLTAFVG 251
           S   L  RGLIN GN C++N TLQAL++ SP     + L+T    D+     P   + + 
Sbjct: 10  SCHHLQLRGLINRGNWCYINTTLQALLAISPISHFYKSLKTFLNTDVSYTSTPLTDSMIA 69

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 311
           F ++F++ +   S KK    +  G  F P     VL         S+S + RQEDA+EFL
Sbjct: 70  FFNEFESINPKISLKKQSEDIKTGASFEPRCIYNVLTTMKA----SLSEKGRQEDAEEFL 125

Query: 312 SFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ-SFLP 367
           S++++ +HDEL+   KL  + T     N  L +  ++  W  VG K K    +   S   
Sbjct: 126 SYLLNGIHDELVALNKLLSKKTPNGNDNADLDNENDDSSWSQVGTKKKDLAKKVNPSSDS 185

Query: 368 SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY 427
           + +  IFGG ++S V+  G K S T+QPF  L LDI  + +  +E A+  +   E L+G+
Sbjct: 186 TIIKQIFGGMIRSSVQQSGVKESTTLQPFFTLQLDIQGDEIWCLEKAIESYFVKEILQGF 245

Query: 428 RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG-SQGSTKLHKSVRFPLQLVLGRDL 486
             S T     V A + + I+ L  +LI HL  F Y  + GS K++K++  P+ L + +D+
Sbjct: 246 TCSKTNTE--VEASRKLSIEELPLVLIFHLKYFVYDRTGGSQKIYKAIDIPVDLEIPKDV 303

Query: 487 LVTPSAEV 494
           L +PS +V
Sbjct: 304 L-SPSLKV 310


>gi|383863085|ref|XP_003707013.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like [Megachile
           rotundata]
          Length = 880

 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 110/311 (35%), Positives = 158/311 (50%), Gaps = 44/311 (14%)

Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL-RTRDIPK-AGYPTLTAFVG 251
           K    LLPRGL N  N C++N+ LQAL++C PF  LL  L  ++ + K +  P +   + 
Sbjct: 514 KQTVSLLPRGLTNRSNYCYINSILQALLACPPFYNLLMALPHSKSLSKMSSTPLIDNMIK 573

Query: 252 FVSDFDTPSGGS--------SKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISGR 301
           FV +F   S  +        +K+   +++DI  G  F PS    +LKN +     S+ GR
Sbjct: 574 FVHEFTPLSDAARLARKDRANKRGEDTIVDIQSGVAFEPSYVYTMLKNTSAAGVFSVEGR 633

Query: 302 PRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTR 361
             QEDA+EFLS +++ ++DE+L                         E +GPKNK ++TR
Sbjct: 634 --QEDAEEFLSCLLNGINDEML-------------------------EVMGPKNKGSITR 666

Query: 362 TQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
              F  + LSDIF GQL+S V   G + +  VQPF  L LDI  E   +++ AL +    
Sbjct: 667 CTEFGRTPLSDIFRGQLRSRVSRAGEQPTDNVQPFFTLQLDI--EKAESVKGALEILVGK 724

Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLV 481
           + LEG   S T     + A K V ++ L  ILILHL  F Y     +K+ KSV FP+ L 
Sbjct: 725 DQLEGMTCSKTKQQ--IEAWKQVTLEELPVILILHLKWFDYKLDVCSKIVKSVEFPVDLK 782

Query: 482 LGRDLLVTPSA 492
           L    L +P+A
Sbjct: 783 LDSKFL-SPNA 792


>gi|378728768|gb|EHY55227.1| ubiquitin thiolesterase [Exophiala dermatitidis NIH/UT8656]
          Length = 898

 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 109/348 (31%), Positives = 178/348 (51%), Gaps = 38/348 (10%)

Query: 171 AAACNSSISGSKEVP--------MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMS 222
           A+A NS++SG  +          M ++ E    +  L PRGL+N+GN+C++N+ LQ L+ 
Sbjct: 397 ASAANSNVSGGSKTETLSSVLHDMNSVPEKPSKISFLKPRGLVNTGNMCYMNSVLQVLVF 456

Query: 223 CSPFVQLLQELRTRDIP---KAGYPTLTAFVGFVSDFDTPSGGSS------KKKNISVLD 273
           C PF   L ++  R  P   K+  P + A + F+ ++      +S      + K     +
Sbjct: 457 CLPFYDFLAKVAQR-APHAFKSDTPLIDAIIMFIQEYPVICSANSVEQLRLRLKAEDYEN 515

Query: 274 IGRPFSPSMFEAVLKNFTPDVPN-SISGRPRQEDAQEFLSFIMDQMHDELLKLQ------ 326
            G  F P    A +K    D+P      R  Q+DAQEFL F+++++H+E  +        
Sbjct: 516 YGDSFIPEYVYAAIK----DLPRFREMRRGHQQDAQEFLGFLLEELHEECARAMRSAGPS 571

Query: 327 ---GESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL--PSALSDIFGGQLKSV 381
              G ++ I   +     +  E  W  VG K K A+TR    +   S +++IFGG+L+S 
Sbjct: 572 SNSGRASPIGSVSNTSEHVDAEGGWMEVGHKQKPAITRLSGAVSGESPITNIFGGKLRSE 631

Query: 382 VKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAK 441
           +K  GNK S T++ +  L LDI S  VH I DAL+  + PE+++G   +  G     TA 
Sbjct: 632 LKVSGNKLSVTLEQYSPLQLDIGSPQVHNIIDALKGMTRPESMQGDFYTPRGQKA--TAT 689

Query: 442 KSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQLVLGRDLL 487
           K + I+TL  +LILHL RF Y   ++   K+ K + +PL+L + +++ 
Sbjct: 690 KQIFIETLPPVLILHLKRFHYDNTTKRVEKIWKKIGYPLELEIPKEVF 737


>gi|327295689|ref|XP_003232539.1| ubiquitin C-terminal hydrolase [Trichophyton rubrum CBS 118892]
 gi|326464850|gb|EGD90303.1| ubiquitin C-terminal hydrolase [Trichophyton rubrum CBS 118892]
          Length = 858

 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 167/309 (54%), Gaps = 25/309 (8%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L+ C PF + L ++  R     K+  P + A + F+ +F
Sbjct: 372 LEPRGLVNTGNMCYMNSILQVLIFCVPFYEFLDQIGRRAAHSFKSDSPLVDAMIMFLREF 431

Query: 257 DTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
                 SS      + K   + + G  F P     V+++  P   +   G   Q+DAQEF
Sbjct: 432 RVIDAASSVEKLRLRLKQNELEEYGESFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEF 488

Query: 311 LSFIMDQMHDELL-----KLQGESTSINGANTALVSLAEE---DEWETVGPKNKSAVTRT 362
           L F+++++HDE L      +  +S     ++    S+A++   D W  VG K K++VTR+
Sbjct: 489 LGFLLEELHDECLLATKNAMADKSDVSTSSDVDAHSIADDSTGDGWLEVGHKQKASVTRS 548

Query: 363 --QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
              S   S ++ IF G+++S  +  GNK S T++P+  L LDI S  V+ I DAL+  + 
Sbjct: 549 SGDSSGESPITRIFSGKIRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTK 608

Query: 421 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPL 478
           PE + G   SS G    V A K V I+ L  +LILHL RF Y   + G+ K+ K + +PL
Sbjct: 609 PETMHGDFQSSRGPK--VNATKQVFIENLPPVLILHLKRFQYDNVTNGTQKIWKKIGYPL 666

Query: 479 QLVLGRDLL 487
           +L + +++ 
Sbjct: 667 ELEIPKEVF 675


>gi|326483341|gb|EGE07351.1| hypothetical protein TEQG_06257 [Trichophyton equinum CBS 127.97]
          Length = 803

 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 167/309 (54%), Gaps = 25/309 (8%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L+ C PF + L ++  R     K+  P + A + F+ +F
Sbjct: 317 LEPRGLVNTGNMCYMNSILQVLIFCVPFYEFLDQIGRRAAHSFKSDSPLVDAMIMFLREF 376

Query: 257 DTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
                 SS      + K   + + G  F P     V+++  P   +   G   Q+DAQEF
Sbjct: 377 RVIDAASSVEKLRLRLKQNELEEYGESFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEF 433

Query: 311 LSFIMDQMHDELL-----KLQGESTSINGANTALVSLAEE---DEWETVGPKNKSAVTRT 362
           L F+++++HDE L      +  +S     ++    S+A++   D W  VG K K++VTR+
Sbjct: 434 LGFLLEELHDECLLATKNAMADKSDVSTSSDMDAHSIADDSTGDGWLEVGHKQKASVTRS 493

Query: 363 --QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
              S   S ++ IF G+++S  +  GNK S T++P+  L LDI S  V+ I DAL+  + 
Sbjct: 494 SGDSSGESPITRIFSGKIRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTK 553

Query: 421 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPL 478
           PE + G   SS G    V A K V I+ L  +LILHL RF Y   + G+ K+ K + +PL
Sbjct: 554 PETMHGDFQSSRGPK--VNATKQVFIENLPPVLILHLKRFQYDNVTNGTQKIWKKIGYPL 611

Query: 479 QLVLGRDLL 487
           +L + +++ 
Sbjct: 612 ELEIPKEVF 620


>gi|281205802|gb|EFA79991.1| ubiquitin hydrolase B [Polysphondylium pallidum PN500]
          Length = 991

 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 115/348 (33%), Positives = 173/348 (49%), Gaps = 53/348 (15%)

Query: 186 MKAINEPVKSVKDLL--PRGLINSGNLCFLNATLQALMSCSPFVQLLQ------ELRTRD 237
           +K  +E V   K +    +GL+N  N CF+N  LQ+L+ C PFV+LL+      E+    
Sbjct: 576 LKTFDEQVHKTKAITFQSKGLVNIANTCFMNVILQSLVGCQPFVKLLKNISSSSEVLDHH 635

Query: 238 IPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVL-------DIGRPFSPSMFEAVLKNF 290
              + YPTL   + F +D+ + +  ++ + + +          I  P +P  F  ++K+F
Sbjct: 636 SQHSKYPTLLNLIQFNNDYFSLTTTTNNQSSSNSSKFMNNNHSIPNPINPKYFSDLVKSF 695

Query: 291 TPDVPNS------------ISGRPRQ-----------------EDAQEFLSFIMDQMHDE 321
              V  S            +S +  +                 +DAQEFL++ +D +H+E
Sbjct: 696 NSKVSPSPPATQPPPLSIPLSKKKSKLMVFEQQQQQLTQQSCQQDAQEFLTYFLDLIHEE 755

Query: 322 LLKLQGESTSING-ANTALVSLAEEDEWETVGPKNKSAVTRTQS--FLPSALSDIFGGQL 378
           L+ L  E   I G     L+    + EWE VG KNK++    QS     S +S IF G L
Sbjct: 756 LVSLVRE---IEGPKEEPLIPDDLDGEWEVVGQKNKTSTINDQSNTSTSSPISQIFSGTL 812

Query: 379 KSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVV 438
           +S V    +K S T+QPF  LHLDI  E ++T++DAL LF   E LEGY T  T     +
Sbjct: 813 RSSVNKHESKESITLQPFYCLHLDIRPENIYTLDDALSLFMKEEALEGY-TCQTKKIE-I 870

Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDL 486
           TA KS+ I+ L +ILI+H  RF+Y ++   KL K + FP QL L   +
Sbjct: 871 TASKSMSIEILPRILIVHFKRFAYDTKAQ-KLDKHISFPTQLTLKSHM 917


>gi|315044965|ref|XP_003171858.1| ubiquitin carboxyl-terminal hydrolase 10 [Arthroderma gypseum CBS
           118893]
 gi|311344201|gb|EFR03404.1| ubiquitin carboxyl-terminal hydrolase 10 [Arthroderma gypseum CBS
           118893]
          Length = 926

 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 167/309 (54%), Gaps = 25/309 (8%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L+ C PF + L ++  R     K+  P + A + F+ +F
Sbjct: 440 LEPRGLVNTGNMCYMNSILQVLIFCVPFYEFLDQIGRRAAHSFKSDSPLVDAMIMFLREF 499

Query: 257 DTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
                 SS      + K   + + G  F P     V+++  P   +   G   Q+DAQEF
Sbjct: 500 RVIDAASSVEKLRLRLKQNELEEYGESFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEF 556

Query: 311 LSFIMDQMHDELL-----KLQGESTSINGANTALVSLAEE---DEWETVGPKNKSAVTRT 362
           L F+++++HDE L      +  +S     ++    S+A++   D W  VG K K++VTR+
Sbjct: 557 LGFLLEELHDECLLATKNAMADKSDVSTSSDVDSQSIADDSTGDGWLEVGHKQKASVTRS 616

Query: 363 --QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
              S   S ++ IF G+++S  +  GNK S T++P+  L LDI S  V+ I DAL+  + 
Sbjct: 617 SGDSSGESPITRIFSGKIRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTK 676

Query: 421 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPL 478
           PE + G   SS G    V A K V I+ L  +LILHL RF Y   + G+ K+ K + +PL
Sbjct: 677 PETMHGDFQSSRGPK--VNATKQVFIEKLPPVLILHLKRFQYDNVTNGTQKIWKKIGYPL 734

Query: 479 QLVLGRDLL 487
           +L + +++ 
Sbjct: 735 ELEIPKEVF 743


>gi|346322680|gb|EGX92278.1| ubiquitin C-terminal hydrolase, putative [Cordyceps militaris CM01]
          Length = 913

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/308 (34%), Positives = 166/308 (53%), Gaps = 27/308 (8%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           L PRGLIN+GN+C++N+ LQ LM CSPF   L ++  R +    +  P L A + F+ ++
Sbjct: 464 LEPRGLINTGNMCYMNSVLQVLMYCSPFYDFLDQISKRAVYSFNSETPLLDAMIMFMHEY 523

Query: 257 ----DTPSGGSSKK--KNISVLDIGRPFSPS-MFEAV--LKNFTPDVPNSISGRPRQEDA 307
                 P+    +K  +   +   G PF+P  ++EA+  L  F      +   R  Q+DA
Sbjct: 524 KVLKSAPNNEQLRKLIRGEEIERYGEPFTPDFVYEAIRQLSRF------ASMRRGHQQDA 577

Query: 308 QEFLSFIMDQMHDELLKLQGE----STSINGANTALV--SLAEEDEWETVGPKNKSAVTR 361
           +EFL F++  + DE   +       ++  + ++ A V  S+    +W  VG K + AVTR
Sbjct: 578 EEFLGFLLQSLDDECTLVMSNASQTASQTDSSDAASVGGSVDATGDWLEVGRKQRPAVTR 637

Query: 362 TQ-SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
           +  S   + ++ IFGG L+S  +  G K S T +P+  L LDI +  +  + DALR  + 
Sbjct: 638 SSGSNASTPVTKIFGGLLRSEFRVPGLKDSITTEPYQPLQLDIGAPEIRNVVDALRGLTR 697

Query: 421 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ-GSTKLHKSVRFPLQ 479
           PE ++G   S  G    +TA K V I+TL  +LILHL RF + ++ G+TK+ K V +PL 
Sbjct: 698 PERMQGDFNSPRGKD--ITATKQVFIETLPPVLILHLKRFQFDAEGGTTKIWKKVGYPLD 755

Query: 480 LVLGRDLL 487
           L + R+ L
Sbjct: 756 LEIPREAL 763


>gi|407918479|gb|EKG11750.1| Peptidase C19 ubiquitin carboxyl-terminal hydrolase 2 [Macrophomina
           phaseolina MS6]
          Length = 878

 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/307 (35%), Positives = 163/307 (53%), Gaps = 27/307 (8%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           + PRGL+N+GN+C++N+ LQ L+ C PF   L ++  R     K+  P L A + F+ +F
Sbjct: 414 IEPRGLVNTGNMCYMNSILQTLVFCIPFYNFLDQVGKRAAYSFKSETPLLDAMIMFMREF 473

Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPN-SISGRPRQEDAQE 309
                  S++      K+  +   G  F P     V+K     +P  S   R  Q+DA+E
Sbjct: 474 PIIDSADSEEQLRLRLKDTELEKYGDAFIPEFVYDVIKR----LPRFSHMRRGHQQDAEE 529

Query: 310 FLSFIMDQMHDE---LLKLQGESTSINGANTALVSLAEEDE---WETVGPKNKSAVTRTQ 363
           FL FI+  +HDE   ++K    S S     T+  S  E D+   W  VGPK K +VTR+ 
Sbjct: 530 FLGFILAGLHDECGHIMKSAPASASTTTEPTS-PSGTEPDQAEGWLEVGPKQKPSVTRSS 588

Query: 364 SFLPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
             + S   ++ IFGG  +S ++A G K S T +PF  L LDI +  V+ I DA++  + P
Sbjct: 589 GTVGSETPITKIFGGMFRSEIRAPGEKPSITKEPFQPLQLDIGAPHVNNIVDAMKALTRP 648

Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQL 480
           E ++ Y++S   N   + A K V I TL  +LILHL RF Y + G T K+ K V +PL L
Sbjct: 649 EPVD-YKSSRGPN---IMAMKQVFIDTLPSVLILHLKRFQYDNTGGTQKIWKKVGYPLDL 704

Query: 481 VLGRDLL 487
            L +++ 
Sbjct: 705 ELPKEVF 711


>gi|340514126|gb|EGR44394.1| predicted protein [Trichoderma reesei QM6a]
          Length = 791

 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 106/313 (33%), Positives = 163/313 (52%), Gaps = 26/313 (8%)

Query: 193 VKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFV 250
           +  V  L PRGLIN+GN+C++N+ LQ L+SC PF   L ++  +     K+  P + A +
Sbjct: 338 IDKVDFLEPRGLINTGNMCYMNSVLQVLVSCVPFYDFLDQVGKKAAHSFKSETPLVDALI 397

Query: 251 GFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR------ 303
            F+ +F         K   SV  + R      FE   + FTP+ V ++I   PR      
Sbjct: 398 MFMREFKV------LKSAPSVEQLNRILKSEDFERYGEPFTPEFVYDAIRHLPRFASMRR 451

Query: 304 --QEDAQEFLSFIMDQMHDE----LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKS 357
             Q+DA+EFL F++  + DE    +  L   +  +  +N +  S    D+W  VG K ++
Sbjct: 452 GHQQDAEEFLGFLLQSLDDECTHVMRDLPMGNEEVPSSNASTGSGVASDDWLEVGRKQRA 511

Query: 358 AVTRTQSFLPSA-LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALR 416
           AV+R      S  ++ IFGG L+S  +  G K S T + +  L LDI S  +H + DALR
Sbjct: 512 AVSRLSGHNTSTPITKIFGGLLRSEFRVPGLKDSITTERYQPLQLDIGSPDIHNVVDALR 571

Query: 417 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSV 474
             + PE L+G   S  G    V A K V I++L  +LILHL RF + ++  G+ K+ K +
Sbjct: 572 GLTRPERLQGDFNSPRGKD--VVATKQVFIESLPPVLILHLKRFQFDAEGRGTVKIWKKI 629

Query: 475 RFPLQLVLGRDLL 487
            +PL+L + R+ L
Sbjct: 630 GYPLELEIPREAL 642


>gi|408387754|gb|EKJ67464.1| hypothetical protein FPSE_12383 [Fusarium pseudograminearum CS3096]
          Length = 948

 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 108/304 (35%), Positives = 162/304 (53%), Gaps = 22/304 (7%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           L PRGLIN+GN+C++N+ LQ LM C PF   L ++  R +   K+  P + A + F+ +F
Sbjct: 505 LEPRGLINTGNMCYMNSVLQVLMFCLPFYDFLNQISKRAVHSFKSDTPLIDAMIMFMHEF 564

Query: 257 DTPSGGSSKK------KNISVLDIGRPFSPS-MFEAVLKNFTPDVPNSIS-GRPRQEDAQ 308
            T    +  +      KN  +   G PF+P  ++EA+ +     +P   S  R  Q+DA+
Sbjct: 565 KTIKSAAGVEPLRLALKNEELERYGEPFTPEFVYEAIRQ-----LPRFASMRRGHQQDAE 619

Query: 309 EFLSFIMDQMHDELLKLQGESTSINGAN--TALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
           EFL F++  + DE   +    T     +  +A       D+W  VG K KSAV+R+    
Sbjct: 620 EFLGFLLQSLDDECTTVLKNFTPDEAEHQPSAGSDAGGADDWLEVGRKQKSAVSRSSGSN 679

Query: 367 PSALSD-IFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
            S+    IFGG L+S  +  G K S T +P+  L LDI S  V  + DALR  + PE L+
Sbjct: 680 SSSPISRIFGGLLRSEFRVPGLKDSITTEPYQPLQLDIGSSDVRNVVDALRGLTRPERLQ 739

Query: 426 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLG 483
           G   S  G    VTA K V I++L  +LILHL RF + ++  G+ K+ K + +PL+L + 
Sbjct: 740 GDFNSPRGKE--VTATKQVFIESLPPVLILHLKRFQFDAEGNGTVKIWKKIGYPLELEIP 797

Query: 484 RDLL 487
           R+ L
Sbjct: 798 REAL 801


>gi|307182775|gb|EFN69898.1| Ubiquitin carboxyl-terminal hydrolase 10 [Camponotus floridanus]
          Length = 905

 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 108/314 (34%), Positives = 157/314 (50%), Gaps = 54/314 (17%)

Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK-----AGYPTLTA 248
           K    LLPRGL N  N C++N+ LQAL++C PF  LL+ +    +PK     +  P +  
Sbjct: 535 KQTVSLLPRGLTNRSNYCYINSILQALLACPPFYNLLKAM---PLPKNRGKNSATPLIDN 591

Query: 249 FVGFVSDFD--TPSGGSSKKKNI-------SVLDI--GRPFSPSMFEAVLKNFTPDVPNS 297
            V FV +F   T +    +K  +       +V+DI  G  F PS    +LK+ +     S
Sbjct: 592 MVKFVREFTPLTEAARMPRKDRVHNKRGEDTVIDIHSGVAFEPSYIYTMLKHTSAAGAFS 651

Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKS 357
           + GR  QEDA+EFLS +++ ++DE+L                         E +GPKNK 
Sbjct: 652 VEGR--QEDAEEFLSCLLNGINDEML-------------------------EVMGPKNKG 684

Query: 358 AVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 417
           AVTR   F  + LSDIF GQL+S V   G + +  VQPF  L LD+  +   ++++AL +
Sbjct: 685 AVTRCTEFGRTPLSDIFRGQLRSRVSRAGEQPTDNVQPFFTLQLDV--QKAESVKNALEI 742

Query: 418 FSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG----SQGSTKLHKS 473
               + +EG   S T     + A K V ++ L  ILILHL  F Y     S G +K+ KS
Sbjct: 743 LVGKDQVEGMTCSKTRQQ--IEAWKQVTLEELPVILILHLKWFVYKFDKYSNGCSKILKS 800

Query: 474 VRFPLQLVLGRDLL 487
           + FP+ L +    L
Sbjct: 801 MEFPVDLKIDGKFL 814


>gi|428169103|gb|EKX38040.1| hypothetical protein GUITHDRAFT_165307 [Guillardia theta CCMP2712]
          Length = 634

 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 153/324 (47%), Gaps = 47/324 (14%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF---- 256
           PRG++N GNLCF+NA LQ+L+ C  F QLL  L    IP+    TL++FV   S+F    
Sbjct: 220 PRGMVNMGNLCFMNAVLQSLIGCRAFFQLLHGLLNSHIPRE-LKTLSSFVSLASEFVELE 278

Query: 257 -------DTPSGGSSKKKNISV-----------LDIGRPFSPSMFEAVLKNFTPDVP-NS 297
                  D        K+  S            L    P +P  F  ++  F P  P   
Sbjct: 279 TAPPPSQDVKDANKEAKETSSTDAAAAAVLVRSLKSSTPLNPGYFFDLVSTFAPTDPVRP 338

Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSING-------------ANTALVSLAE 344
             G+ RQEDAQEFLSF+++ +HDE +  +    S +G             + T   +  +
Sbjct: 339 GRGKARQEDAQEFLSFLLNCLHDEFVSFENRVLSADGNGPNGGSGEDGGSSTTGADASPD 398

Query: 345 EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIY 404
           +D+W+ VG   K    R  +   S +S IFGGQ ++ ++    KASA+++PFL ++LDI 
Sbjct: 399 DDDWQEVGGHAKVTFVRKLNMETSPVSKIFGGQFRTTIRYSSTKASASLEPFLCINLDIA 458

Query: 405 SEAVH------TIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLM 458
            E+ H      T+ + +  +  PE L+G             A++  +I+    +L+LHL 
Sbjct: 459 MESSHKDVKSVTLHEIISSYFKPEKLDGV----VNGCQEGKAQRHAQIEKGPDVLVLHLK 514

Query: 459 RFSYGSQGSTKLHKSVRFPLQLVL 482
           RF +    + K+   V +P  L L
Sbjct: 515 RFRFDGASAHKILTRVSYPDTLSL 538


>gi|322694571|gb|EFY86397.1| Ubiquitin carboxyl-terminal hydrolase family protein [Metarhizium
           acridum CQMa 102]
          Length = 833

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/349 (33%), Positives = 179/349 (51%), Gaps = 36/349 (10%)

Query: 168 DQNAAACNSSISGSKEVPMKA--INEPVKSVKD--------LLPRGLINSGNLCFLNATL 217
           D   AA   ++ GSK  P       E ++S K         + PRGL+N+GN+C++N+ L
Sbjct: 342 DAVEAATVPAVPGSKFSPANRSFFGEAIRSFKIDRTEKATLIEPRGLVNTGNMCYMNSVL 401

Query: 218 QALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLD-- 273
           Q LM C+PF   L +L  R     K+  P + A V F+ +F   +  SS K+    L   
Sbjct: 402 QVLMFCAPFYDFLDQLSKRAAHSFKSETPLVDAMVMFLQEFKVLASASSSKQLRGTLKSQ 461

Query: 274 ----IGRPFSPS-MFEAVLKNFTPDVPNSIS-GRPRQEDAQEFLSFIMDQMHDELL---- 323
                G PF+P  ++EA+ +     +P   S  R  Q+DA+EFL F++  + DE      
Sbjct: 462 VFELYGEPFTPEFVYEAIRQ-----LPRFASMRRGHQQDAEEFLGFLLQSLDDECTLAMN 516

Query: 324 -KLQGESTSI-NGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA-LSDIFGGQLKS 380
               GE+  + N  +    + A   +W  VG K K+AV+R+     S+ ++ IFGG L+S
Sbjct: 517 KSFPGETEQVQNEKSIDHEAAAPSGDWLEVGRKQKAAVSRSSGSNTSSPITKIFGGLLRS 576

Query: 381 VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTA 440
             +  G K S T +P+  L LDI S  V  + DALR  + PE L+G   S  G    V A
Sbjct: 577 EFRVPGLKDSITTEPYQPLQLDIGSSDVRNVVDALRGLTRPERLQGDFNSPRGKD--VLA 634

Query: 441 KKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQLVLGRDLL 487
            K V I++L  +LILHL RF +   + G+ K+ K + +PL+L + R++L
Sbjct: 635 TKQVFIESLPPVLILHLKRFQFDATANGTIKIWKKIGYPLELEIPREVL 683


>gi|346970069|gb|EGY13521.1| ubiquitin carboxyl-terminal hydrolase [Verticillium dahliae
           VdLs.17]
          Length = 927

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/305 (34%), Positives = 161/305 (52%), Gaps = 24/305 (7%)

Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP---KAGYPTLTAFV 250
           + VK + PRGL+N GN+C++N+ LQ L+ C PF   L ++ +  +P   K+  P L A +
Sbjct: 477 EKVKYVEPRGLVNIGNMCYMNSVLQVLLFCVPFYDFLDQI-SEKVPLSFKSQTPILDAMI 535

Query: 251 GFVSDFDTPSGGSSKKK------NISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQ 304
            F+ +F   + G S  K      N  +   G  F+P   E + +   PD       R  Q
Sbjct: 536 LFMREFQVINSGDSAAKLRKLLKNEELEQYGTSFTP---EFIYQAIEPDKRFENMRRGHQ 592

Query: 305 EDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSL---AEEDEWETVGPKNKSAVTR 361
           +DA+EF   ++  + DE  K+ G ++  N  + A  S    A  D W  VG K ++AVTR
Sbjct: 593 QDAEEFFGLLLQSLDDECAKVMGVASG-NAPHPAPASANADATADGWLEVGAKQRAAVTR 651

Query: 362 TQSFLPSA-LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
           +     S  ++ IFGG L+S ++  G + S T +P+  L LDI +  V  + DAL+  +A
Sbjct: 652 SSGASSSTPITQIFGGLLRSELRVTGKQDSITTEPYQALQLDIGANDVRNVVDALKRLTA 711

Query: 421 PENLE--GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ-GSTKLHKSVRFP 477
            E LE  G+ +    NA VV   K   I TL  +LILHL RF + ++ G+TK+ K V +P
Sbjct: 712 HEKLEGSGFNSPHGKNATVV---KQTLIDTLPPVLILHLKRFHFDAEGGTTKIWKKVGYP 768

Query: 478 LQLVL 482
           L+L +
Sbjct: 769 LELEI 773


>gi|119615876|gb|EAW95470.1| ubiquitin specific peptidase 10, isoform CRA_a [Homo sapiens]
          Length = 861

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 159/295 (53%), Gaps = 31/295 (10%)

Query: 217 LQALMSCSPFVQLLQ--ELRTR-DIPKAGYPTLTAFVGFVSDFD---TPSGGSSKKKNIS 270
           ++AL++C P   L++   L ++   P    P + +FV  +++F     P        +  
Sbjct: 493 IKALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFVRLMNEFTNMPVPPKPRQALGDKI 552

Query: 271 VLDI--GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQG- 327
           V DI  G  F P+    +L        +S+S + RQEDA+E+L FI++ +H+E+L L+  
Sbjct: 553 VRDIRPGAAFEPTYIYRLLTVNK----SSLSEKGRQEDAEEYLGFILNGLHEEMLNLKKL 608

Query: 328 --------------ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 373
                         ++ S+N           EDEWE VGP+NK++VTR   F+ + ++ I
Sbjct: 609 LSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPRNKTSVTRQADFVQTPITGI 668

Query: 374 FGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
           FGG ++SVV  Q +K SAT+QPF  L LDI S+ + T++DAL    A E+++GY T +  
Sbjct: 669 FGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDALESLVARESVQGYTTKTKQ 728

Query: 434 NAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQGSTKLHKSVRFPLQLVLGRDLL 487
               V   + V ++ L  +L+LHL RF Y  + G  KL K++ +P+ L + ++LL
Sbjct: 729 E---VEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEYPVDLEISKELL 780


>gi|242014362|ref|XP_002427860.1| conserved hypothetical protein [Pediculus humanus corporis]
 gi|212512329|gb|EEB15122.1| conserved hypothetical protein [Pediculus humanus corporis]
          Length = 1009

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/311 (34%), Positives = 158/311 (50%), Gaps = 29/311 (9%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLT--AFVGFVSDF 256
           L PRGL N  N C++NA LQ+L++C PF  LL+ L      K    TL   A V + ++F
Sbjct: 623 LQPRGLTNRSNWCYVNAVLQSLIACPPFYNLLKALPVTPNKKGNKQTLIVDALVEYANEF 682

Query: 257 D-----------TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 305
                         S  +  + NI  +  G  F PS    +L         ++ GR  QE
Sbjct: 683 SPIPANARIGKREKSARNKDENNIVEIVTGPAFEPSGIYKILDKVRGGSSFNVEGR--QE 740

Query: 306 DAQEFLSFIMDQMHDELLKLQGESTSIN-------GANTALVSLAEED--EWETVGPKNK 356
           DA+EFLS +++ ++DE+ +L  +   IN        A+ +L    ++D  EW  +GPKNK
Sbjct: 741 DAEEFLSCLLNGLNDEMFELM-KMVGINRLDLANGDAHDSLGGNIDDDDSEWNVMGPKNK 799

Query: 357 SAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALR 416
           S++TR      + +SDIF GQ +S V+  G +++ TVQPF  L LDI  E  ++++DAL 
Sbjct: 800 SSITRRAVCGKTPVSDIFRGQFRSRVQRAGEQSTDTVQPFFTLQLDI--EKANSVKDALE 857

Query: 417 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRF 476
           LF   + LEG   S T     V A     ++ L  +LILHL  + Y S   +K+ K+  F
Sbjct: 858 LFMGKDPLEGVTCSKTHQE--VEAWTQTTLEDLPLVLILHLKCYDYKSDACSKIIKNFDF 915

Query: 477 PLQLVLGRDLL 487
            + L +   LL
Sbjct: 916 QVDLRIDAKLL 926


>gi|406702466|gb|EKD05482.1| ubiquitin-specific protease [Trichosporon asahii var. asahii CBS
           8904]
          Length = 1075

 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/337 (33%), Positives = 170/337 (50%), Gaps = 49/337 (14%)

Query: 191 EPVKSVKDLLPRGLINSGNLCFLNAT-------------LQALMSCSPFVQLLQELRTR- 236
            P  +   ++PRGLIN+GN+CF N               LQ L  C+PF +L +EL  R 
Sbjct: 659 RPAGAPAPIVPRGLINTGNMCFANTVGYFCLSCANPPQILQVLRYCTPFTELFEELGKRL 718

Query: 237 --DIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRP----FSP-SMFEAVLKN 289
             D+ +   P L A V F+ +F    G S+   N +    G+     F P ++++A+ +N
Sbjct: 719 KADLARR-TPLLEAMVVFLREFA--PGPSTNGSNGTSTPKGKARDNAFIPENVYDAMKEN 775

Query: 290 FTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQ---------GESTSINGANTALV 340
              D       R  QEDA+E+L F ++ +H+ELL L           +S + NG +   +
Sbjct: 776 KRFDT----MRRGYQEDAEEYLGFFLNTLHEELLDLYSRTAPAKPVAKSAAANGDSERTI 831

Query: 341 SLA--------EEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASAT 392
                      ++D+W  VG K K+ V RT     S++S IFGG L+SV+   G+K S T
Sbjct: 832 DRPVSPKGRRNDDDDWLEVGKKQKTHVVRTAETRESSVSRIFGGSLRSVLHTPGSKDSVT 891

Query: 393 VQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKI 452
           ++P+  L LDI +  VHT+ DALR  + PE + G   S+  NA  V A K V ++TL  +
Sbjct: 892 LEPYQPLQLDIQANEVHTLVDALRHLNEPETVPGV-WSAARNAN-VDATKQVYLETLPPV 949

Query: 453 LILHLMRFSYGSQGS--TKLHKSVRFPLQLVLGRDLL 487
           LILHL RF Y  Q     K  K V +  +L +  +++
Sbjct: 950 LILHLKRFVYDPQEQNVVKRSKPVAYSTELTIPAEII 986


>gi|392580194|gb|EIW73321.1| hypothetical protein TREMEDRAFT_73044 [Tremella mesenterica DSM 1558]
          Length = 1120

 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 114/317 (35%), Positives = 162/317 (51%), Gaps = 32/317 (10%)

Query: 200  LPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGY--PTLTAFVGFVSDFD 257
            LPRGLIN+GN+CF N  LQ L+ C PF QLL+EL  R     G   P L A + F+ +F+
Sbjct: 719  LPRGLINTGNMCFANTILQVLVFCLPFTQLLEELGKRLKADLGRQTPLLEAMIVFLREFN 778

Query: 258  TPS--GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR--------QED 306
             P    G++  +  + L  G   S    +     F P+ V  ++    R        QED
Sbjct: 779  LPDPVPGAAPSQQRNALINGSKHSRRDKDHRSTAFIPEHVYEAMKANKRFDFVQKGHQED 838

Query: 307  AQEFLSFIMDQMHDELLKLQGESTSINGANTAL------------VSLAEEDE--WETVG 352
            A+EF  F+ D +H+E+LKL   S++   ++  L            VS   ED   W  VG
Sbjct: 839  AEEFFGFLNDTLHEEILKLVSRSSNRKISSGQLPNGDTDKHIRRPVSPGAEDSSGWLEVG 898

Query: 353  PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 412
             K +    R+     SA+S +FGG L+SV++  GNK S T++PF  L LDI S+ V TIE
Sbjct: 899  KKQRVHQVRSVESHESAISRLFGGTLRSVLRVPGNKDSVTLEPFKTLALDIRSD-VTTIE 957

Query: 413  DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKL 470
            DALR  + PE + G  + S      V A K V I+T   +L+LHL RF Y    Q   K 
Sbjct: 958  DALRHIAEPEIVPGVYSPSRKEK--VDASKQVTIETFPPVLVLHLKRFEYDQVEQRVFKR 1015

Query: 471  HKSVRFPLQLVLGRDLL 487
             K V +  +L++  +++
Sbjct: 1016 DKPVAYGTELIIPSEVV 1032


>gi|302793823|ref|XP_002978676.1| hypothetical protein SELMODRAFT_109291 [Selaginella moellendorffii]
 gi|300153485|gb|EFJ20123.1| hypothetical protein SELMODRAFT_109291 [Selaginella moellendorffii]
          Length = 245

 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 84/187 (44%), Positives = 121/187 (64%), Gaps = 11/187 (5%)

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           RQEDA EFL F+++Q+H+ELLKL G + S  G       +A +DEWETVGPKN++A  RT
Sbjct: 1   RQEDAPEFLCFLLNQIHEELLKLDGRTVSEAG-------VAVDDEWETVGPKNRTARVRT 53

Query: 363 QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA-- 420
            S + S L+DIF GQL + VK +G+KAS  V+PF +L LDI S  VH++EDAL++     
Sbjct: 54  CSRIWSPLTDIFCGQLYNNVKPKGSKASIQVEPFYVLTLDISSGTVHSVEDALKVCQVLT 113

Query: 421 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
            E +  YR           + +  K+ +L K+LIL L+RF YG+ G+ K+ +++ F  QL
Sbjct: 114 REGMGRYRL--LLYFAFQDSSRGTKVVSLPKVLILQLLRFGYGNSGTRKVSRAIDFSEQL 171

Query: 481 VLGRDLL 487
            +G++LL
Sbjct: 172 TVGKELL 178


>gi|310796856|gb|EFQ32317.1| ubiquitin carboxyl-terminal hydrolase [Glomerella graminicola
           M1.001]
          Length = 947

 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 185/365 (50%), Gaps = 36/365 (9%)

Query: 143 NAGGHANPSPISKFHVLCDGNIDGRDQNAAA--CNSSISGSKEVPMKAINEPVKSVKDLL 200
           NA G   P+  +   +  DG+++G   + +    NS ++  ++     +  P K V+ + 
Sbjct: 444 NANGSGTPAATNGAAINGDGSVNGSASSFSTGNANSLVAAIQDF---RVGNPAK-VQFIE 499

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF-- 256
           PRGLIN+GN+C++N+ LQ L+ C+PF   L ++  R +   K+  P + A + F+ +F  
Sbjct: 500 PRGLINTGNMCYMNSVLQVLLFCAPFYNFLDQVSKRAVHKFKSDTPVIDAMIMFMREFRV 559

Query: 257 ----DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
               D+      K K+  +   G  F P   E V K   P    +   R  Q+DAQEFL 
Sbjct: 560 IDATDSVEKLRRKLKSEQLEQYGESFIP---EFVYKAIQPLPAFASMRRGHQQDAQEFLG 616

Query: 313 FIMDQMHDELLKLQGESTSING-----ANTALVSLAEE----DEWETVGPKNKSAVTRTQ 363
            I++ + +E  ++       NG       ++  S+ E     D W  VG + ++  TR+ 
Sbjct: 617 LILNAIDEECAQVMSAGGVSNGLAEARPTSSAASVVESNDGADGWFEVGSRQRAVETRSS 676

Query: 364 -SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
            +   + ++ +F GQ +S ++  G K S T +PF  L LDI +  +H + DA++  + PE
Sbjct: 677 GASSTTPITRLFSGQYRSELRRPGVKDSVTTEPFQSLQLDIGAPHIHNVVDAIKGLTVPE 736

Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 482
            L+       G+A  +T  K   I+TL  ILILHL RF + ++G+TK+ K V +PL L L
Sbjct: 737 RLQ-------GDAAPMT--KQTLIETLPPILILHLKRFKFDTEGTTKIAKKVGYPLDLQL 787

Query: 483 GRDLL 487
             ++L
Sbjct: 788 PAEVL 792


>gi|195129379|ref|XP_002009133.1| GI11427 [Drosophila mojavensis]
 gi|193920742|gb|EDW19609.1| GI11427 [Drosophila mojavensis]
          Length = 849

 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 161/314 (51%), Gaps = 39/314 (12%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 251
           L PRGL N  N C++N+ LQAL+ CSPF  LL     R IPK          PT+ A + 
Sbjct: 429 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVMSEVKTPTVNAMMS 483

Query: 252 FVSDFDT-PSGGSSKKKNISVLDIGR------------PFSPSMFEAVLKNFTPDVPNSI 298
           ++S+F + PSG   +  N +    G+             F P+    + K +       +
Sbjct: 484 YMSNFSSLPSGTRLRLNNKAAQIKGKDEFAGVDLQCDLAFEPT---EIYKLWNDSREEHV 540

Query: 299 SGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAE----EDEWETV-GP 353
            G  RQEDA+EFL +++++++DE+L++       N     +    E     D+W+ +   
Sbjct: 541 EG--RQEDAEEFLGYVLNKLNDEMLEIIKLIAKPNAQQNGVEQEQEIEDGGDDWQMICNN 598

Query: 354 KNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIED 413
           +NK ++TR   F  + LSDIF G+L+S ++ +G  ++  +QPF  L L+I  E   ++++
Sbjct: 599 RNKGSITRQTDFGRTPLSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVKE 656

Query: 414 ALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKS 473
           AL +    + LEG   S +     V A + + ++ L  +LILHL  F Y S G TK+ K 
Sbjct: 657 ALEILVGRDQLEGVTGSKSKQE--VVAWQQMTVEKLPIVLILHLKYFDYRSDGCTKILKK 714

Query: 474 VRFPLQLVLGRDLL 487
           V FP++L +   +L
Sbjct: 715 VEFPVELKIDAKIL 728


>gi|322710343|gb|EFZ01918.1| ubiquitin hydrolase, putative [Metarhizium anisopliae ARSEF 23]
          Length = 809

 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 107/306 (34%), Positives = 164/306 (53%), Gaps = 26/306 (8%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDT 258
           PRGL+N+GN+C++N+ LQ LM C+PF   L ++  R     K+  P + A V F+ +F  
Sbjct: 361 PRGLVNTGNMCYMNSVLQVLMFCAPFYDFLDQVSKRAAHSFKSETPLVDAMVMFLQEFKV 420

Query: 259 PSGGSSKKKNISVLD------IGRPFSPS-MFEAVLKNFTPDVPNSIS-GRPRQEDAQEF 310
            +  SS K+  S L        G PF+P  ++EA+ +     +P   S  R  Q+DA+EF
Sbjct: 421 LASASSSKQLRSTLKSQVFELYGEPFTPEFVYEAIRQ-----LPRFASMRRGHQQDAEEF 475

Query: 311 LSFIMDQMHDELL-----KLQGESTSI-NGANTALVSLAEEDEWETVGPKNKSAVTRTQS 364
           L F++  + DE          GE+  + +  +    + A   +W  VG K K+AV+R+  
Sbjct: 476 LGFLLQSLDDECTLVMNKSFPGETEQVPDEKSIDHEAAAPSGDWLEVGRKQKAAVSRSSG 535

Query: 365 FLPSA-LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 423
              S+ ++ IFGG L+S  +  G K S T +P+  L LDI S  V  + DALR  + PE 
Sbjct: 536 SNTSSPITKIFGGLLRSEFRVPGLKDSITTEPYQPLQLDIGSPDVRNVVDALRGLTRPER 595

Query: 424 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQLV 481
           L+G   S  G    V A K V I++L  +LILHL RF +   + G+ K+ K + +PL+L 
Sbjct: 596 LQGDFNSPRGKD--VLATKQVFIESLPPVLILHLKRFQFDATANGTIKIWKKIGYPLELE 653

Query: 482 LGRDLL 487
           + R+ L
Sbjct: 654 IPREAL 659


>gi|405119403|gb|AFR94176.1| ubiquitin-specific protease [Cryptococcus neoformans var. grubii
           H99]
          Length = 1109

 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 177/370 (47%), Gaps = 64/370 (17%)

Query: 171 AAACNSSISGSKEVPMKAINEPVKSVKD---------------LLPRGLINSGNLCFLNA 215
           AAA  SS+    E  +K ++E V S++                ++PRGLIN+GN+CF N 
Sbjct: 635 AAAAMSSVPSPHEELIKLLSEGVSSLRGTGATVGLSVKEKEALMVPRGLINTGNMCFANT 694

Query: 216 TLQALMSCSPFVQLLQELRTR---DIPKAGYPTLTAFVGFVSDF-----------DTPSG 261
            LQ L+ C PF +L +E   R   D+ +   P L A + F+ +F            TP G
Sbjct: 695 ILQVLVYCPPFTELFEEFGKRLKADLARKT-PLLEAMIVFLREFVSSPEPSTSTTSTPKG 753

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
               K +     I      ++++A+ +N   D       R  QEDA+E+L F ++ +H+E
Sbjct: 754 KGKDKDSRKEAFIPE----NVYDAMKENKRFDS----MRRGYQEDAEEYLGFFLNTLHEE 805

Query: 322 LLKL----------------------QGESTSINGANTALVSLAEEDEWETVGPKNKSAV 359
           ++ L                      + E     GA     +      W  VG K K+ V
Sbjct: 806 IIYLLSRTSTTSSSIPNGQPSDSSSREVERPVSPGAAGINGNADSSSGWLEVGKKQKTHV 865

Query: 360 TRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
            R      SA+S +FGG+L+S++   G K S T++P+  L LDI + A+ +I DALR  S
Sbjct: 866 VRATESRESAVSRLFGGKLRSILHTPGQKDSVTIEPYQPLQLDITAPAILSITDALRAIS 925

Query: 420 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFP 477
            PE + G  +++ G  G V A K+V ++T  K+LI HL RF Y ++  G  K  K+V + 
Sbjct: 926 TPEIIHGVYSAAKG--GEVDATKTVYVETWPKVLICHLKRFVYDTEEGGVVKRSKAVAYG 983

Query: 478 LQLVLGRDLL 487
           + L +  +++
Sbjct: 984 VDLAIPNEII 993


>gi|158296242|ref|XP_316682.4| AGAP006652-PA [Anopheles gambiae str. PEST]
 gi|157016417|gb|EAA11019.5| AGAP006652-PA [Anopheles gambiae str. PEST]
          Length = 2169

 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 159/314 (50%), Gaps = 34/314 (10%)

Query: 199  LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA-----GYPTLTAFVGFV 253
            ++PRGLIN  N C++N  LQAL++C PF  L++ +RT  +P A       P + A     
Sbjct: 1685 MMPRGLINRSNYCYINTILQALIACPPFYHLMRTIRT--LPAAKNSKHPKPFIDAMCALA 1742

Query: 254  SDFDT------PSGGSSKKKN-------ISVLDIGRPFSPSMFEAVLKNFTPDVPNSISG 300
            ++F        P     +          I  + +  PF P++   +L     D+   I G
Sbjct: 1743 NEFSQLPIRSKPQQQQQRGGGDKGKKDDIPEIQVDTPFEPTVIYKMLNGIRSDI-FQIEG 1801

Query: 301  RPRQEDAQEFLSFIMDQMHDELLKL----QGESTSING---ANTALVSLAEEDEWETVGP 353
            R  QEDA+EFL  ++++++DE+++     + +  ++NG    N  +    + D+W  +  
Sbjct: 1802 R--QEDAEEFLGCVLNRLNDEMIEFIKFNKTDQGNLNGEEPTNGEVHGEEDADDWMVICK 1859

Query: 354  KNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIED 413
             NK  VTRT  F  S +SDIF G+L+S V+  G   +  +QPF  L LDI  E   ++++
Sbjct: 1860 GNKGTVTRTTDFGRSPISDIFRGKLRSRVQRDGVPPTYNIQPFFTLPLDI--EKAASVKE 1917

Query: 414  ALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKS 473
            AL      + LEG   S T     V A + V ++ L  +LILHL  F Y   G TK+ K+
Sbjct: 1918 ALEQLVGRDELEGVTCSKTKQE--VAAWQQVTLEELPVVLILHLKCFDYKMDGCTKILKT 1975

Query: 474  VRFPLQLVLGRDLL 487
            + FP++L +   L+
Sbjct: 1976 LDFPIELKIDSKLM 1989


>gi|302805713|ref|XP_002984607.1| hypothetical protein SELMODRAFT_120879 [Selaginella moellendorffii]
 gi|300147589|gb|EFJ14252.1| hypothetical protein SELMODRAFT_120879 [Selaginella moellendorffii]
          Length = 245

 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 84/187 (44%), Positives = 121/187 (64%), Gaps = 11/187 (5%)

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           RQEDA EFL F+++Q+H+ELLKL G + S        V +A +DEWETVGPKN++A  RT
Sbjct: 1   RQEDAPEFLCFLLNQIHEELLKLDGRTVS-------EVGVAVDDEWETVGPKNRTARVRT 53

Query: 363 QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA-- 420
            S + S L+DIF GQL + VK +G+KAS  V+PF +L LDI S  VH++EDAL++     
Sbjct: 54  CSRIWSPLTDIFCGQLYNNVKPKGSKASIQVEPFYVLTLDISSGTVHSVEDALKVCQVLT 113

Query: 421 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
            E +  YR           + +  K+ +L K+LIL L+RF YG+ G+ K+ +++ F  QL
Sbjct: 114 REGVGRYRL--LLYFAFQDSSRGTKVVSLPKVLILQLLRFGYGNSGTRKVSRAIDFSEQL 171

Query: 481 VLGRDLL 487
            +G++LL
Sbjct: 172 TVGKELL 178


>gi|443920841|gb|ELU40673.1| ubiquitin-specific protease [Rhizoctonia solani AG-1 IA]
          Length = 1056

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/339 (34%), Positives = 171/339 (50%), Gaps = 48/339 (14%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK--AGYPTL-TAFVGFVSDFD 257
           PRGLINSGN+CF N  +QAL+  +PFV+L + L    +P   +G  +L  A + F+ +F 
Sbjct: 647 PRGLINSGNMCFANVVMQALVYSAPFVRLFETL-AHLVPGSLSGKTSLYEATILFLREFT 705

Query: 258 TP--------------SGGSSKKKNISVLDIG---RPFSPSMFEAVLKNFTPDVPNSISG 300
                           SG S+               PF P +  A +K          S 
Sbjct: 706 PEPESPPPAAPKAKSRSGASTPMPPEQTRQQAWNENPFFPELLYAAMKQNKRFDSMQFSQ 765

Query: 301 RPRQEDAQEFLSFIMDQMHDELL----KLQGESTS-----INGA--------NTALVSLA 343
           R  QEDA+EFL F +D +H+ELL    ++Q E+        NG+        NT  V   
Sbjct: 766 RGHQEDAEEFLGFFLDTLHEELLSILSRVQTETAPEGTAWTNGSISRTPGVENTREVQRP 825

Query: 344 -----EEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFL 397
                ++ +W  VG KNK A+TRT     SA++ IFGG+L+SV+   G +K S T++P+ 
Sbjct: 826 VSPDNKDGDWMEVGKKNKPAITRTTRATESAITRIFGGKLRSVLSIPGSSKDSVTLEPYQ 885

Query: 398 LLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHL 457
            L LDI S+ + TIEDAL+  + PE +  +   S    G+V AKK V +++L  +LILHL
Sbjct: 886 PLQLDIQSDHIRTIEDALKHITVPEIVSMH---SEARGGMVDAKKQVTLESLPPLLILHL 942

Query: 458 MRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
            R  Y ++G  K  K + +   L + R  +V+P+    Q
Sbjct: 943 KRLVYDAKGIQKNSKVIEYSTTLEI-RPEIVSPTRRTKQ 980


>gi|195378014|ref|XP_002047782.1| GJ13624 [Drosophila virilis]
 gi|194154940|gb|EDW70124.1| GJ13624 [Drosophila virilis]
          Length = 1601

 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 160/315 (50%), Gaps = 40/315 (12%)

Query: 199  LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 251
            L PRGL N  N C++N+ LQAL+ CSPF  LL     R IPK          PT+ A + 
Sbjct: 1184 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSEVKTPTVNAMMS 1238

Query: 252  FVSDFDTPSGGSSKKKNISV--------------LDIGRPFSPSMFEAVLKNFTPDVPNS 297
            F+S+F +  GG+  + N +               L     F P+    + K +       
Sbjct: 1239 FMSNFSSLPGGTRLRLNNNKAAQIKGKDEFAGVDLQCDLAFEPT---EIYKLWNDSREEH 1295

Query: 298  ISGRPRQEDAQEFLSFIMDQMHDELLK----LQGESTSINGANTALVSLAEEDEWETV-G 352
            + G  RQEDA+EFL +++++++DE+L+    +   +   NG      +    D W+ +  
Sbjct: 1296 VEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIAKPNAQQNGEEQEQDTEDGGDVWQMICN 1353

Query: 353  PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 412
             +NK +VTR   F  + LSDIF G+L+S ++ +G  ++  +QPF  L L+I  E   +++
Sbjct: 1354 NRNKGSVTRQTDFGRTPLSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 1411

Query: 413  DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 472
            +AL +    + LEG   S T     V A + + ++ L  +LILHL  F Y S G TK+ K
Sbjct: 1412 EALEILVGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPIVLILHLKYFDYRSDGCTKILK 1469

Query: 473  SVRFPLQLVLGRDLL 487
             V FP++L +   +L
Sbjct: 1470 KVEFPVELKIDAKIL 1484


>gi|449547151|gb|EMD38119.1| hypothetical protein CERSUDRAFT_113250 [Ceriporiopsis subvermispora
           B]
          Length = 872

 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 108/311 (34%), Positives = 156/311 (50%), Gaps = 34/311 (10%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG--------YPTLTAFV 250
           L PRGL+N+GN+CF NA LQ L+ C PF +L  ELR      AG         P + A  
Sbjct: 484 LRPRGLVNTGNMCFANAVLQILVYCPPFHKLFSELRKYLSSPAGAQKDRSQATPLVDATT 543

Query: 251 GFVSDF--------DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLK---NFTPDVPNSIS 299
            F+ +F        ++   G  ++++   LD    F P+    V+K    F     N I 
Sbjct: 544 QFLKEFLPEVPDPAESRGKGKEREEDFDELDS---FIPTYVYDVMKEKKRFA----NMIG 596

Query: 300 GRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDE-WETVGPKNKSA 358
           G   QEDA+EFL F +D + +ELL L   S S           A++DE W  VG KN++ 
Sbjct: 597 GH--QEDAEEFLGFYLDTLEEELLSL-ANSLSAGAPAAPEREEAQQDEGWHEVGKKNRAV 653

Query: 359 VTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLF 418
           +TRT     S ++ IFGG+ +S + A   + S  V+ +  L LDI  E V TI+DALR  
Sbjct: 654 LTRTVKSTESPITRIFGGKFRSTLSAPRQRESVIVEDWRSLRLDIQREQVSTIQDALRHI 713

Query: 419 SAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRF 476
           S P+ ++   TS T    ++ A +   I+ L  IL+LHL RF Y +      K+ K + F
Sbjct: 714 SDPQPVQ--ITSPTQPGVIIDATQQALIEALPPILVLHLKRFLYDTSIGDVVKVGKQIAF 771

Query: 477 PLQLVLGRDLL 487
             +L +  DL+
Sbjct: 772 TPELDVTPDLI 782


>gi|380482368|emb|CCF41279.1| ubiquitin carboxyl-terminal hydrolase [Colletotrichum higginsianum]
          Length = 959

 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/317 (31%), Positives = 166/317 (52%), Gaps = 31/317 (9%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTL 246
           ++ P K V+ + PRGLIN+GN+C++N+ LQ L+ C+PF   L ++  R +   K+  P +
Sbjct: 501 VSNPAK-VQFIEPRGLINTGNMCYMNSVLQVLLFCAPFYNFLDQVSKRAVHKFKSDTPVI 559

Query: 247 TAFVGFVSDF------DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISG 300
            A + F+ +F      D+      K K+  +   G  F P   E V K   P    +   
Sbjct: 560 DAMIMFMREFRVIDATDSVEKLRRKLKSEQLEQYGESFIP---EFVYKAIQPLPAFASMR 616

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQ---------GESTSINGANTALVSLAEEDEWETV 351
           R  Q+DAQEFL  I++ + +E  ++           E+   + A +A+ S    + W  V
Sbjct: 617 RGHQQDAQEFLGLILNAIDEECAQVMSAGGLANGSAETRPTSSAASAVESTDGAEGWFEV 676

Query: 352 GPKNKSAVTRTQ-SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHT 410
           G + ++  TR+  +   + ++ +F GQ +S ++  G K S T +PF  L LDI +  +H 
Sbjct: 677 GSRQRAVETRSSGASSTTPITRLFSGQYRSELRRPGVKDSVTTEPFQSLQLDIGAPYIHN 736

Query: 411 IEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKL 470
           + DA++  + PE L+       G+A  +T  K   I+TL  ILILHL RF + ++G+TK+
Sbjct: 737 VVDAIKGLTVPERLQ-------GDAAPMT--KQTLIETLPPILILHLKRFKFDTEGTTKI 787

Query: 471 HKSVRFPLQLVLGRDLL 487
            K V +PL L L  ++L
Sbjct: 788 GKKVGYPLDLQLPVEVL 804


>gi|19113320|ref|NP_596528.1| ubiquitin C-terminal hydrolase Ubp3 [Schizosaccharomyces pombe
           972h-]
 gi|24638294|sp|O94269.1|UBP3_SCHPO RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase 3;
           AltName: Full=Deubiquitinating enzyme 3; AltName:
           Full=Ubiquitin thioesterase 3; AltName:
           Full=Ubiquitin-specific-processing protease 3
 gi|3810845|emb|CAA21806.1| ubiquitin C-terminal hydrolase Ubp3 [Schizosaccharomyces pombe]
          Length = 512

 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 180/368 (48%), Gaps = 63/368 (17%)

Query: 151 SPISKFHVLCDGNIDGRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNL 210
           SP+ K H +    +        + NSS+    E    +++ P    + + PRG IN+GN+
Sbjct: 89  SPVKKSHSVP---VPSDRSEKKSFNSSLGELIETYSPSLDAP----RPIQPRGFINTGNI 141

Query: 211 CFLNATLQALMSCSPFVQLLQELRTRDIP---KAGYPTLTAFVGFVSDFDTPSGGSSKKK 267
           CF+N+ LQALM C PF  LL+++  R +P   +   P + +      DF           
Sbjct: 142 CFMNSILQALMYCVPFYNLLKQI-NRMVPYNFERTTPLIESLTMLSRDF----------- 189

Query: 268 NISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS-GRPR--------QEDAQEFLSFIMDQM 318
                   R +S   F+    +  P+V  S + G PR        QEDA+EFL+  +D++
Sbjct: 190 --------REYS-EKFDLQGDSILPEVVYSATKGNPRFEMLQTGEQEDAEEFLNLFLDEL 240

Query: 319 HDELLK------LQGESTS-------INGANTALVSL-----AEEDEWETVGPKNKSAVT 360
           H+E ++      L+ +  +        NG  + L S       E   W  VG   K  + 
Sbjct: 241 HEEFVRERRHYLLKNDERNPKSDIKISNGIKSGLDSFDDQSSVEASGWTEVGKNKKPVIA 300

Query: 361 RTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
           R+ +   S +S IFGGQL+S ++    + S  ++PF  L LDI +E +H++ DAL   +A
Sbjct: 301 RSATVERSPISQIFGGQLRSTLRVPSARDSVLLEPFQPLQLDIQAEDIHSVIDALEHMTA 360

Query: 421 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQ 479
           PE L  +  SS GN   VTA K + I++L  +LILHL RF Y + G T K +K + +P +
Sbjct: 361 PEILPEWH-SSKGN---VTATKQMYIESLPPVLILHLKRFFYEASGGTQKNYKPIAYPAR 416

Query: 480 LVLGRDLL 487
           L + +++ 
Sbjct: 417 LSIPQNVF 424


>gi|302913332|ref|XP_003050898.1| hypothetical protein NECHADRAFT_41715 [Nectria haematococca mpVI
           77-13-4]
 gi|256731836|gb|EEU45185.1| hypothetical protein NECHADRAFT_41715 [Nectria haematococca mpVI
           77-13-4]
          Length = 920

 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 107/304 (35%), Positives = 160/304 (52%), Gaps = 38/304 (12%)

Query: 199 LLPRGLINSGNLCFLNA-TLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFD 257
           L PRGLIN+GN+C++N+ + +A+ S                 K+  P + A + F+ +F 
Sbjct: 491 LEPRGLINTGNMCYMNSISKRAVHSF----------------KSETPLIDAMIMFMHEFK 534

Query: 258 TPSGGSSKK------KNISVLDIGRPFSPS-MFEAVLKNFTPDVPNSIS-GRPRQEDAQE 309
                SS +      KN  +   G PF+P  ++EA+ +     +P   S  R  Q+DA+E
Sbjct: 535 IIKSASSVEPLRRSLKNEELERYGEPFTPEFVYEAIRQ-----LPRFASMRRGHQQDAEE 589

Query: 310 FLSFIMDQMHDELLKLQGEST---SINGANTALVSLAEEDEWETVGPKNKSAVTRTQ-SF 365
           FL F++  + DE   +   ST       AN A  +    D+W  VG K K+AVTR+  S 
Sbjct: 590 FLGFLLQSLDDECTSVMNSSTLAEQSEKANAAEGAAGTSDDWLEVGRKQKAAVTRSAGSN 649

Query: 366 LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
             S +S IFGG L+S  +  G K S T +P+  L LDI S  V  + DALR  + PE ++
Sbjct: 650 SSSPISKIFGGLLRSEFRVPGLKDSITTEPYQPLQLDIGSSDVRNVVDALRGLTRPERIQ 709

Query: 426 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLG 483
           G   S  G    VTA K V I++L  +LILHL RF + ++  G+ K+ K + +PL+L + 
Sbjct: 710 GDFNSPRGKD--VTATKQVFIESLPPVLILHLKRFQFDAEGNGTVKIWKKIGYPLELEIP 767

Query: 484 RDLL 487
           RD+L
Sbjct: 768 RDVL 771


>gi|195019971|ref|XP_001985094.1| GH16868 [Drosophila grimshawi]
 gi|193898576|gb|EDV97442.1| GH16868 [Drosophila grimshawi]
          Length = 1668

 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 159/315 (50%), Gaps = 40/315 (12%)

Query: 199  LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 251
            L PRGL N  N C++N+ LQAL+ CSPF  LL     R IPK          PT+ A + 
Sbjct: 1252 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVMSEVKTPTVNAMMS 1306

Query: 252  FVSDFDTPSGGS----SKKKNISV----------LDIGRPFSPSMFEAVLKNFTPDVPNS 297
            F+S+F +  GG+    S  K   +          L     F P+    + K +       
Sbjct: 1307 FMSNFSSLPGGTRLRFSNNKAAQIKGKDEFAGVDLQCDLAFEPT---EIYKLWNDSREEH 1363

Query: 298  ISGRPRQEDAQEFLSFIMDQMHDELLK----LQGESTSINGANTALVSLAEEDEWETV-G 352
            + G  RQEDA+EFL +++++++DE+L+    +   +   NG           D W+ +  
Sbjct: 1364 VEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIAKPNARQNGEEQEQEPEDGGDVWQMICN 1421

Query: 353  PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 412
             +NK +VTR   F  + LSDIF G+L+S ++ +G  ++  +QPF  L L+I  E   +++
Sbjct: 1422 NRNKGSVTRQTDFGRTPLSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 1479

Query: 413  DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 472
            +AL +    + LEG   S T     V A + + ++ L  +LILHL  F Y S G TK+ K
Sbjct: 1480 EALEILVGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPVVLILHLKYFDYRSDGCTKILK 1537

Query: 473  SVRFPLQLVLGRDLL 487
             V FP++L +   +L
Sbjct: 1538 KVEFPVELKIDAKIL 1552


>gi|442629286|ref|NP_001261228.1| CG32479, isoform B [Drosophila melanogaster]
 gi|440215092|gb|AGB93923.1| CG32479, isoform B [Drosophila melanogaster]
          Length = 797

 Score =  148 bits (373), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 159/315 (50%), Gaps = 40/315 (12%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 251
           L PRGL N  N C++N+ LQAL+ CSPF  LL     R IPK          PT+ A + 
Sbjct: 387 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSEVKTPTVNAMMS 441

Query: 252 FVSDFDT-PSGGSSKKKNI--------------SVLDIGRPFSPSMFEAVLKNFTPDVPN 296
           F+++F + PSG   +  N+              S L     F P+    + K +      
Sbjct: 442 FMTNFSSLPSGLRLRLNNLNKGSQSKGKDDFVGSDLQCDMAFEPT---EIYKLWNDSREE 498

Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETV-G 352
            + G  RQEDA+EFL +++++++DE+L   KL  + T               D W+ +  
Sbjct: 499 HVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIDKPTPQQNGQEPAEPEDGGDVWQMICN 556

Query: 353 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 412
            +NK +VTR   F  + +SDIF G+L+S ++ +G  ++  +QPF  L L+I  E   +++
Sbjct: 557 NRNKGSVTRQTDFGRTPVSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 614

Query: 413 DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 472
           +AL +    + LEG   S T     V A + + ++ L  +LILHL  F Y S G TK+ K
Sbjct: 615 EALEILVGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPVVLILHLKYFDYRSDGCTKILK 672

Query: 473 SVRFPLQLVLGRDLL 487
            V FP++L +   +L
Sbjct: 673 KVDFPVELKIDAKIL 687


>gi|327287256|ref|XP_003228345.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like, partial
           [Anolis carolinensis]
          Length = 334

 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 88/230 (38%), Positives = 136/230 (59%), Gaps = 24/230 (10%)

Query: 275 GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQ------GE 328
           G  F P+    +L      + +S+S + RQEDA+E+L FI++ +H+E+L L+       E
Sbjct: 31  GAAFEPTYIYRLLTV----IKSSLSEKGRQEDAEEYLGFILNGLHEEMLILKKLLSPHSE 86

Query: 329 STSI-NGANTALVSLAEE---------DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
             ++ NG  T  V+  EE         DEWE VGP+NKS+VTR   F+ + ++DIFGG +
Sbjct: 87  KLAVSNGPETPSVNEEEEQEEQGEGSEDEWEQVGPRNKSSVTRQADFVQTPITDIFGGHI 146

Query: 379 KSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVV 438
           +SVV  Q +K SAT+QPF  L LDI S+ + T++DAL    A E+++GY T +      V
Sbjct: 147 RSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDALESLVARESVQGYTTKTKQE---V 203

Query: 439 TAKKSVKIQTLSKILILHLMRFSY-GSQGSTKLHKSVRFPLQLVLGRDLL 487
              + V ++ L  +L+LHL RF Y  + G  KL K++ +P+ L + ++LL
Sbjct: 204 EISRRVTLEELPPVLVLHLKRFVYEKTGGCQKLIKNIEYPVDLEISKELL 253


>gi|336367502|gb|EGN95847.1| hypothetical protein SERLA73DRAFT_162553 [Serpula lacrymans var.
           lacrymans S7.3]
          Length = 676

 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 158/316 (50%), Gaps = 32/316 (10%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL------RTRDIPKAGYPTLTAFVGF 252
           + PRGLIN+GN+CF NA LQ L+ C PF +L  EL            K   P + A V F
Sbjct: 277 IRPRGLINNGNMCFANAVLQVLVYCPPFWRLFTELGRFLGENGTQEEKTKIPLVDATVQF 336

Query: 253 VSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTP-DVPNSISGRPR-------- 303
           + +F   +    K K +   D G  +     E    +F P  V +++  + +        
Sbjct: 337 LKEFQPKASVQGKGKGVE-RDYG--YREDQEEDGFDSFLPTHVYDAMKEKKQFDHMRGGH 393

Query: 304 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDE--------WETVGPKN 355
           QEDA+EF  F +D + +ELL +    +       A   + E +E        W  VG +N
Sbjct: 394 QEDAEEFFGFYLDTLEEELLSIVSSISPATSKPNAHAHVEEREEAAPPPESGWLEVGRRN 453

Query: 356 KSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDAL 415
           K+ VTRT     S ++ IFGG+ +S ++A   K S  V+ +  L LDI  E ++TI+DAL
Sbjct: 454 KTVVTRTIKTAESPITRIFGGKFRSTLRAPQQKDSVIVEDWRSLRLDIQREQIYTIKDAL 513

Query: 416 RLFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSY--GSQGSTKLHK 472
              SAP++++    +S    GVV  A + V+I+ L  IL+LH+ RF Y   + G  K+ K
Sbjct: 514 AYISAPQSVQ---VTSPARPGVVIDASQLVQIEALPPILVLHMKRFLYDMNAGGVAKVGK 570

Query: 473 SVRFPLQLVLGRDLLV 488
            V F  +L +G D++ 
Sbjct: 571 QVSFGPELEIGPDIMA 586


>gi|194748629|ref|XP_001956747.1| GF24416 [Drosophila ananassae]
 gi|190624029|gb|EDV39553.1| GF24416 [Drosophila ananassae]
          Length = 1508

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 164/318 (51%), Gaps = 46/318 (14%)

Query: 199  LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 251
            L PRGL N  N C++N+ LQAL+ CSPF  LL     R IPK          PT+ A + 
Sbjct: 1103 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSEVKTPTVNAMMS 1157

Query: 252  FVSDFDT-PSG----------GSSKKKNI----SVLDIGRPFSPSMFEAVLKNFTPDVPN 296
            F+S+F + PSG          GS  K       S L     F P+    + K +      
Sbjct: 1158 FMSNFSSLPSGLRLRLNTLNKGSQNKGKDEFVGSDLQCDMAFEPT---EIYKLWNDSREE 1214

Query: 297  SISGRPRQEDAQEFLSFIMDQMHDELLK----LQGESTSINGANTALVSLAEE--DEWET 350
             + G  RQEDA+EFL +++++++DE+L+    +   S   NG +    S  E+  D W+ 
Sbjct: 1215 HVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIDKPSAQQNGQDQ---SEPEDGGDVWQM 1269

Query: 351  V-GPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVH 409
            +   +NK +VTR   F  + +SDIF G+L+S ++ +G  ++  +QPF  L L+I  E   
Sbjct: 1270 ICNNRNKGSVTRQTDFGRTPVSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAA 1327

Query: 410  TIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTK 469
            ++++AL +    + LEG   S T     V A + + ++ L  +LILHL  F Y S G TK
Sbjct: 1328 SVKEALEILVGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPVVLILHLKYFDYRSDGCTK 1385

Query: 470  LHKSVRFPLQLVLGRDLL 487
            + K V FP++L +   +L
Sbjct: 1386 ILKKVEFPVELKIDAKIL 1403


>gi|58260736|ref|XP_567778.1| ubiquitin-specific protease [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|57229859|gb|AAW46261.1| ubiquitin-specific protease, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 1099

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 178/367 (48%), Gaps = 57/367 (15%)

Query: 171 AAACNSSISGSKEVPMKAINEPVKSVKD---------------LLPRGLINSGNLCFLNA 215
           AAA  SS+    E  +K ++E V S++                ++PRGLIN+GN+CF N 
Sbjct: 620 AAAAMSSVPSPHEELIKLLSEGVSSLRGSGTTVGLSVKEKEALMVPRGLINTGNMCFANT 679

Query: 216 TLQALMSCSPFVQLLQELRTR---DIPKAGYPTLTAFVGFVSDF------DTPSGGSSKK 266
            LQ L+ C PF +L +E   R   D+ +   P L A + F+ +F       T +  + K 
Sbjct: 680 ILQVLVYCPPFTELFEEFGKRLKADLARKT-PLLEAMIIFLREFVSSPESSTSTTSTPKG 738

Query: 267 KNISVLDIGRPFSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKL 325
           K          F P ++++A+ +N   D       R  QEDA+E+L F ++ +H+E++ L
Sbjct: 739 KGKDKDSRKEAFIPENVYDAMKENKRFDS----MRRGYQEDAEEYLGFFLNTLHEEIIYL 794

Query: 326 ----------------------QGESTSINGANTALVSLAEEDE-WETVGPKNKSAVTRT 362
                                 Q E      A   +   A+    W  VG K K+ V R 
Sbjct: 795 LSQTSTTSSSMPNGQPSDSSSRQVERPVSPRAGAGINGNADSSSGWLEVGKKQKTHVVRA 854

Query: 363 QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
                SA+S +FGG+L+S++   G K S T++P+  L LDI   A+ +I DALR  S PE
Sbjct: 855 TESRESAVSRLFGGKLRSILHTPGQKDSVTIEPYQPLQLDITGPAILSITDALRAISTPE 914

Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQL 480
            + G  +++ G  G V A K+V ++T  K+LI HL RF Y ++  G  K  K+V + + L
Sbjct: 915 IIHGVYSAAKG--GEVDATKTVYVETWPKVLICHLKRFVYDTEEGGVVKRSKAVAYGVDL 972

Query: 481 VLGRDLL 487
            +  +++
Sbjct: 973 AIPNEII 979


>gi|134117471|ref|XP_772629.1| hypothetical protein CNBK3330 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255246|gb|EAL17982.1| hypothetical protein CNBK3330 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 1092

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 178/367 (48%), Gaps = 57/367 (15%)

Query: 171 AAACNSSISGSKEVPMKAINEPVKSVKD---------------LLPRGLINSGNLCFLNA 215
           AAA  SS+    E  +K ++E V S++                ++PRGLIN+GN+CF N 
Sbjct: 613 AAAAMSSVPSPHEELIKLLSEGVSSLRGTGTTVGLSVKEKEALMVPRGLINTGNMCFANT 672

Query: 216 TLQALMSCSPFVQLLQELRTR---DIPKAGYPTLTAFVGFVSDF------DTPSGGSSKK 266
            LQ L+ C PF +L +E   R   D+ +   P L A + F+ +F       T +  + K 
Sbjct: 673 ILQVLVYCPPFTELFEEFGKRLKADLARKT-PLLEAMIIFLREFVSSPESSTSTTSTPKG 731

Query: 267 KNISVLDIGRPFSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKL 325
           K          F P ++++A+ +N   D       R  QEDA+E+L F ++ +H+E++ L
Sbjct: 732 KGKDKDSRKEAFIPENVYDAMKENKRFDS----MRRGYQEDAEEYLGFFLNTLHEEIIYL 787

Query: 326 ----------------------QGESTSINGANTALVSLAEEDE-WETVGPKNKSAVTRT 362
                                 Q E      A   +   A+    W  VG K K+ V R 
Sbjct: 788 LSQTSTTSSSMPNGQPSDSSSRQVERPVSPRAGAGINGNADSSSGWLEVGKKQKTHVVRA 847

Query: 363 QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
                SA+S +FGG+L+S++   G K S T++P+  L LDI   A+ +I DALR  S PE
Sbjct: 848 TESRESAVSRLFGGKLRSILHTPGQKDSVTIEPYQPLQLDITGPAILSITDALRAISTPE 907

Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQL 480
            + G  +++ G  G V A K+V ++T  K+LI HL RF Y ++  G  K  K+V + + L
Sbjct: 908 IIHGVYSAAKG--GEVDATKTVYVETWPKVLICHLKRFVYDTEEGGVVKRSKAVAYGVDL 965

Query: 481 VLGRDLL 487
            +  +++
Sbjct: 966 AIPNEII 972


>gi|170109677|ref|XP_001886045.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164638975|gb|EDR03249.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 949

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 115/322 (35%), Positives = 161/322 (50%), Gaps = 40/322 (12%)

Query: 202 RGLINSGNLCFLNATLQALMSCSPFVQLLQEL-RTRDIPKAG--------YPTLTAFVGF 252
           RGL+NSGN+CF N+ LQ L+ C+PF QL  EL R    P  G         P + A V F
Sbjct: 550 RGLVNSGNMCFANSVLQILVYCAPFYQLFGELGRVMPEPVVGKESQSQKEQPLVAATVAF 609

Query: 253 VSDF---DTPSGGSSKKKNI----------SVLDI--GRPFSPS-MFEAVLKNFTPDVPN 296
           + +F   D    G ++  ++            LD   G  F PS +++A+ +    D  N
Sbjct: 610 LKEFKGKDVVGAGGARNGSVGRKGKEREEREQLDDWDGDSFLPSYVYDAMKEKKRFD--N 667

Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELLK-LQGESTSINGANTALVSLAE------EDEWE 349
              G   QEDA+EFL F +D + +ELL  L   S S   A  A V   E      +D W 
Sbjct: 668 MRGGH--QEDAEEFLGFYLDTLEEELLSILHSVSPSRQKAAPAPVEEKEEAAPPEQDGWL 725

Query: 350 TVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVH 409
            VG +N++ VTRT     S ++ IFGG+ +S ++A   K S  V+ +  L LDI  E +H
Sbjct: 726 EVGKRNRTVVTRTIKATESPITRIFGGKFRSTLRAPRQKDSVIVEDWRSLRLDIQREQIH 785

Query: 410 TIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GS 467
           TI+DAL   S P+ ++    S  G    + A + V I  L  ILILH+ RF Y +   G 
Sbjct: 786 TIQDALSYISHPQPVQVTHPSQPGI--TIDATQQVLIDALPPILILHIKRFCYDTTVGGV 843

Query: 468 TKLHKSVRFPLQLVLGRDLLVT 489
            K+ K V F  +L +G DL+ T
Sbjct: 844 VKVGKQVLFGPELEIGPDLMST 865


>gi|321264227|ref|XP_003196831.1| ubiquitin-specific protease [Cryptococcus gattii WM276]
 gi|317463308|gb|ADV25044.1| Ubiquitin-specific protease, putative [Cryptococcus gattii WM276]
          Length = 1089

 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 180/362 (49%), Gaps = 52/362 (14%)

Query: 171 AAACNSSISGSKEVPMKAINEPVKSVKD------------LLPRGLINSGNLCFLNATLQ 218
           AAA  SS+    E  ++ ++E V S++             ++PRGLIN+GN+CF N  LQ
Sbjct: 623 AAAAMSSVPSPHEDLVRLLSEGVSSIRGPVGLTAKEKEALMVPRGLINTGNMCFANTILQ 682

Query: 219 ALMSCSPFVQLLQELRTR---DIPKAGYPTLTAFVGFVSDF------DTPSGGSSKKKNI 269
            L+ C PF +L +E   R   D+ +   P L A + F+ +F       T +  + K K  
Sbjct: 683 VLVYCPPFTELFEEFGKRLKADLARKT-PLLEAMIIFLREFVSSPESSTSTTSTPKGKGK 741

Query: 270 SVLDIGRPFSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKL--- 325
                   F P ++++A+ +N   D       R  QEDA+E+L F ++ +H+E++ L   
Sbjct: 742 DKDSRKEAFIPENVYDAMKENKRFDS----MRRGYQEDAEEYLGFFLNTLHEEIIYLLSR 797

Query: 326 ---------QGESTS---------INGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP 367
                     G+S+          I+    A  +      W  VG K K+ V R      
Sbjct: 798 TSTTSSSIPNGQSSDPSSRKIERPISPGAGANGNADSSSGWLEVGKKQKTHVVRATESRE 857

Query: 368 SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY 427
           S++S +FGG+L+S++   G K S T++P+  L LDI    + +I DALR  S PE + G 
Sbjct: 858 SSVSRLFGGKLRSILHTPGQKDSVTIEPYQPLQLDITGATILSITDALRAISTPEIIHGV 917

Query: 428 RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRD 485
            +++ G  G V A K+V ++T  K+LI HL RF Y ++  G  K  K+V + + L++  +
Sbjct: 918 YSAAKG--GEVDATKTVYVETWPKVLICHLKRFVYDTEEGGVVKRSKAVAYGVDLMIPNE 975

Query: 486 LL 487
           ++
Sbjct: 976 II 977


>gi|194864707|ref|XP_001971067.1| GG14744 [Drosophila erecta]
 gi|190652850|gb|EDV50093.1| GG14744 [Drosophila erecta]
          Length = 1541

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 159/315 (50%), Gaps = 40/315 (12%)

Query: 199  LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 251
            L PRGL N  N C++N+ LQAL+ CSPF  LL     R IPK          PT+ A + 
Sbjct: 1131 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSEVKTPTVNAMMS 1185

Query: 252  FVSDFDT-PSGGSSKKKNI--------------SVLDIGRPFSPSMFEAVLKNFTPDVPN 296
            F+++F + PSG   +  N+              S L     F P+    + K +      
Sbjct: 1186 FMTNFSSLPSGLRLRLNNLNKGPQSKGKDEFVGSDLQCDMAFEPT---EIYKLWNDSREE 1242

Query: 297  SISGRPRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETV-G 352
             + G  RQEDA+EFL +++++++DE+L   KL  + T               D W+ +  
Sbjct: 1243 HVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIDKPTPQQNGQEPAEPEDGGDVWQMICN 1300

Query: 353  PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 412
             +NK +VTR   F  + +SDIF G+L+S ++ +G  ++  +QPF  L L+I  E   +++
Sbjct: 1301 NRNKGSVTRQTDFGRTPVSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 1358

Query: 413  DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 472
            +AL +    + LEG   S T     V A + + ++ L  +LILHL  F Y S G TK+ K
Sbjct: 1359 EALEILVGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPVVLILHLKYFDYRSDGCTKILK 1416

Query: 473  SVRFPLQLVLGRDLL 487
             V FP++L +   +L
Sbjct: 1417 KVEFPVELKIDAKIL 1431


>gi|195490238|ref|XP_002093054.1| GE21106 [Drosophila yakuba]
 gi|194179155|gb|EDW92766.1| GE21106 [Drosophila yakuba]
          Length = 1513

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 160/315 (50%), Gaps = 40/315 (12%)

Query: 199  LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 251
            L PRGL N  N C++N+ LQAL+ CSPF  LL     R IPK          PT+ A + 
Sbjct: 1103 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSEVKTPTVNAMMS 1157

Query: 252  FVSDFDT-PS-----------GGSSKKKNISV---LDIGRPFSPSMFEAVLKNFTPDVPN 296
            F+++F + PS           G  SK K+  V   L     F P+    + K +      
Sbjct: 1158 FMTNFSSLPSGLRLRLNNLNKGAQSKGKDEFVGSDLQCDMAFEPT---EIYKLWNDSREE 1214

Query: 297  SISGRPRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETV-G 352
             + G  RQEDA+EFL +++++++DE+L   KL  + T               D W+ +  
Sbjct: 1215 HVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIDKPTPQQNGQEPAEPEDGGDVWQMICN 1272

Query: 353  PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 412
             +NK +VTR   F  + +SDIF G+L+S ++ +G  ++  +QPF  L L+I  E   +++
Sbjct: 1273 NRNKGSVTRQTDFGRTPVSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 1330

Query: 413  DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 472
            +AL +    + LEG   S T     V A + + ++ L  +LILHL  F Y S G TK+ K
Sbjct: 1331 EALEILVGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPVVLILHLKYFDYRSDGCTKILK 1388

Query: 473  SVRFPLQLVLGRDLL 487
             V FP++L +   +L
Sbjct: 1389 KVEFPVELKIDAKIL 1403


>gi|195336431|ref|XP_002034839.1| GM14362 [Drosophila sechellia]
 gi|194127932|gb|EDW49975.1| GM14362 [Drosophila sechellia]
          Length = 1427

 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 159/315 (50%), Gaps = 40/315 (12%)

Query: 199  LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 251
            L PRGL N  N C++N+ LQAL+ CSPF  LL     R IPK          PT+ A + 
Sbjct: 1017 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSEVKTPTVNAMMS 1071

Query: 252  FVSDFDT-PSGGSSKKKNI--------------SVLDIGRPFSPSMFEAVLKNFTPDVPN 296
            F+++F + PSG   +  N+              S L     F P+    + K +      
Sbjct: 1072 FMTNFSSLPSGLRLRLNNLNKGSQSKGKDEFVGSDLQCDMAFEPT---EIYKLWNDSREE 1128

Query: 297  SISGRPRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETV-G 352
             + G  RQEDA+EFL +++++++DE+L   KL  + T               D W+ +  
Sbjct: 1129 HVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIDKPTPQQNGQEPAEPEDGGDVWQMICN 1186

Query: 353  PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 412
             +NK +VTR   F  + +SDIF G+L+S ++ +G  ++  +QPF  L L+I  E   +++
Sbjct: 1187 NRNKGSVTRQTDFGRTPVSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 1244

Query: 413  DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 472
            +AL +    + LEG   S T     V A + + ++ L  +LILHL  F Y S G TK+ K
Sbjct: 1245 EALEILVGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPVVLILHLKYFDYRSDGCTKILK 1302

Query: 473  SVRFPLQLVLGRDLL 487
             V FP++L +   +L
Sbjct: 1303 KVDFPVELKIDAKIL 1317


>gi|24654914|ref|NP_728554.1| CG32479, isoform A [Drosophila melanogaster]
 gi|442629288|ref|NP_001261229.1| CG32479, isoform C [Drosophila melanogaster]
 gi|21483414|gb|AAM52682.1| LD28815p [Drosophila melanogaster]
 gi|23092724|gb|AAF47426.2| CG32479, isoform A [Drosophila melanogaster]
 gi|220947592|gb|ACL86339.1| CG32479-PA [synthetic construct]
 gi|440215093|gb|AGB93924.1| CG32479, isoform C [Drosophila melanogaster]
          Length = 1517

 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 159/315 (50%), Gaps = 40/315 (12%)

Query: 199  LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 251
            L PRGL N  N C++N+ LQAL+ CSPF  LL     R IPK          PT+ A + 
Sbjct: 1107 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSEVKTPTVNAMMS 1161

Query: 252  FVSDFDT-PSGGSSKKKNI--------------SVLDIGRPFSPSMFEAVLKNFTPDVPN 296
            F+++F + PSG   +  N+              S L     F P+    + K +      
Sbjct: 1162 FMTNFSSLPSGLRLRLNNLNKGSQSKGKDDFVGSDLQCDMAFEPT---EIYKLWNDSREE 1218

Query: 297  SISGRPRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETV-G 352
             + G  RQEDA+EFL +++++++DE+L   KL  + T               D W+ +  
Sbjct: 1219 HVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIDKPTPQQNGQEPAEPEDGGDVWQMICN 1276

Query: 353  PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 412
             +NK +VTR   F  + +SDIF G+L+S ++ +G  ++  +QPF  L L+I  E   +++
Sbjct: 1277 NRNKGSVTRQTDFGRTPVSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 1334

Query: 413  DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 472
            +AL +    + LEG   S T     V A + + ++ L  +LILHL  F Y S G TK+ K
Sbjct: 1335 EALEILVGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPVVLILHLKYFDYRSDGCTKILK 1392

Query: 473  SVRFPLQLVLGRDLL 487
             V FP++L +   +L
Sbjct: 1393 KVDFPVELKIDAKIL 1407


>gi|213405707|ref|XP_002173625.1| ubiquitin carboxyl-terminal hydrolase [Schizosaccharomyces
           japonicus yFS275]
 gi|212001672|gb|EEB07332.1| ubiquitin carboxyl-terminal hydrolase [Schizosaccharomyces
           japonicus yFS275]
          Length = 524

 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 154/291 (52%), Gaps = 23/291 (7%)

Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPT---LTAFVGFVS 254
           ++ PRG +N+ N+CF+N+  QAL+ C PF  L++ L  + +P+        L + +    
Sbjct: 156 NIQPRGFVNTSNMCFMNSIFQALLYCVPFYVLMRNL-GKKLPRLFRDKGSLLGSVITLTQ 214

Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
           +F        ++        G  + P +   V+KN  P      +G   QEDA+EFL+  
Sbjct: 215 EFRENWQPGEEE--------GDAYIPEVVYRVMKN-NPRFDLVQTGE--QEDAEEFLNLF 263

Query: 315 MDQMHDELLK---LQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 371
           +D+MH+E ++   L+  S+    A        EE+ W  VG K K  +TR+ +   S ++
Sbjct: 264 LDEMHEEFVRTGNLEKASSPNADAVDKDKEDKEEEGWLEVGKKQKPVITRSATVSHSPIT 323

Query: 372 DIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSS 431
           +IFGGQL+SV+K    + S  ++P+  L LDI  + +H++ DA+   + PE L+G+R+  
Sbjct: 324 EIFGGQLRSVLKVPNARDSVLLEPYQPLPLDIQPDHIHSVLDAMDHLTTPETLKGWRSP- 382

Query: 432 TGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQL 480
                 VTA K V I+ L  +LILHL RF Y  Q  G+ K  K + +PL+L
Sbjct: 383 --KGHTVTATKQVFIEKLPAVLILHLKRFLYDDQAGGTLKNTKLISYPLRL 431


>gi|195586799|ref|XP_002083155.1| GD13581 [Drosophila simulans]
 gi|194195164|gb|EDX08740.1| GD13581 [Drosophila simulans]
          Length = 1051

 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 158/315 (50%), Gaps = 40/315 (12%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 251
           L PRGL N  N C++N+ LQAL+ CSPF  LL     R IPK          PT+ A   
Sbjct: 641 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSEVKTPTVNAICL 695

Query: 252 FVSDFDT-PSGGSSKKKNI--------------SVLDIGRPFSPSMFEAVLKNFTPDVPN 296
           F+++F + PSG   +  N+              S L     F P+    + K +      
Sbjct: 696 FMTNFSSLPSGLRLRLNNLNKGSQSKGKDEFVGSDLQCDMAFEPT---EIYKLWNDSREE 752

Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETV-G 352
            + G  RQEDA+EFL +++++++DE+L   KL  + T               D W+ +  
Sbjct: 753 HVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIDKPTPQQNGQEPAEPEDGGDVWQMICN 810

Query: 353 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 412
            +NK +VTR   F  + +SDIF G+L+S ++ +G  ++  +QPF  L L+I  E   +++
Sbjct: 811 NRNKGSVTRQTDFGRTPVSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 868

Query: 413 DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 472
           +AL +    + LEG   S T     V A + + ++ L  +LILHL  F Y S G TK+ K
Sbjct: 869 EALEILVGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPVVLILHLKYFDYRSDGCTKILK 926

Query: 473 SVRFPLQLVLGRDLL 487
            V FP++L +   +L
Sbjct: 927 KVDFPVELKIDAKIL 941


>gi|195428110|ref|XP_002062117.1| GK17362 [Drosophila willistoni]
 gi|194158202|gb|EDW73103.1| GK17362 [Drosophila willistoni]
          Length = 1652

 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 159/320 (49%), Gaps = 45/320 (14%)

Query: 199  LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 251
            L PRGL N  N C++N+ LQAL+ CSPF  LL     R IPK          PT+ A + 
Sbjct: 1231 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSEVKTPTVNAMMS 1285

Query: 252  FVSDFDT-PSG-------------GSSKKKNISV----LDIGRPFSPSMFEAVLKNFTPD 293
            F+++F   PSG             GS  K         L     F P+    + K +   
Sbjct: 1286 FMTNFTALPSGLRLRLNNNLNNNKGSQNKGKDEFAGVDLQCDMAFEPT---EIYKLWNDS 1342

Query: 294  VPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDE-----W 348
                + G  RQEDA+EFL +++++++DE+L++       N         A+E E     W
Sbjct: 1343 REEHVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIDKPNPQQNGQQEQADEPEDDGDVW 1400

Query: 349  ETV-GPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEA 407
            + +   +NK +VTR   F  + +SDIF G+L+S ++ +G  ++  +QPF  L L+I  E 
Sbjct: 1401 QMICNNRNKGSVTRQTDFGRTPISDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EK 1458

Query: 408  VHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS 467
              ++++AL +    + LEG   S T     V A + + ++ L  +LILHL  F Y S G 
Sbjct: 1459 AASVKEALEILIGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPIVLILHLKYFDYRSDGC 1516

Query: 468  TKLHKSVRFPLQLVLGRDLL 487
            TK+ K V FP++L +   +L
Sbjct: 1517 TKILKKVEFPVELKIDAKIL 1536


>gi|443682890|gb|ELT87325.1| hypothetical protein CAPTEDRAFT_168563 [Capitella teleta]
          Length = 383

 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 109/314 (34%), Positives = 156/314 (49%), Gaps = 38/314 (12%)

Query: 200 LPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK-----AGYPTLTAFVGFVS 254
           +PRGL N GN C++NATLQAL++C PF  L++ L   D P      +  P +   V FV+
Sbjct: 1   MPRGLHNKGNWCYVNATLQALLACPPFYHLMKSLP--DFPALARGPSSTPVIDCLVEFVN 58

Query: 255 DFDTPSGGSSKKKNISV-------LDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDA 307
            F T      +K  ++        +  G PF P+    +L     D         RQEDA
Sbjct: 59  AFSTMQYKPLEKSALNAKGTVRQDIQTGIPFEPTYVYKMLHVIKNDTGFQ---HGRQEDA 115

Query: 308 QEFLSFIMDQMHDELLK----LQGESTS---------INGANTALVSLAEEDEWETVGPK 354
           +EFLS +++ +HDE+L     LQ  S           +NG         E      VGPK
Sbjct: 116 EEFLSCLLNALHDEMLASLQTLQPPSEELPPSDPVPEVNGDGEEQEEGWE-----QVGPK 170

Query: 355 NKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDA 414
           NKS +TR   F  S +S +  GQL+SV+   G + SAT++PF  L LDI  + + ++EDA
Sbjct: 171 NKSVLTREAKFKTSPVSAMMRGQLRSVLHKTGARESATLEPFFSLQLDIQGKDIRSVEDA 230

Query: 415 LRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLH-KS 473
           L   ++ E L G+  S T     V A + + ++ L  +LILHL  FSY   G  + + K 
Sbjct: 231 LGGLTSRETLHGFTCSKTKQE--VDATQRLLLEELPPVLILHLKWFSYDKSGGIQKNVKQ 288

Query: 474 VRFPLQLVLGRDLL 487
           V F   L + +DLL
Sbjct: 289 VDFAADLEINKDLL 302


>gi|429849220|gb|ELA24624.1| ubiquitin c-terminal hydrolase [Colletotrichum gloeosporioides Nara
           gc5]
          Length = 906

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 162/310 (52%), Gaps = 31/310 (10%)

Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFV 253
           V+ + PRGLIN+GN+C++N+ LQ L+ C PF   L ++  R +   K+  P + A + F+
Sbjct: 455 VQFIEPRGLINTGNMCYMNSVLQVLLFCIPFYDFLDQVSKRAVHKFKSDTPVIDAMIMFM 514

Query: 254 SDF------DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDA 307
            +F      D+      K KN  +   G  F P   E V K   P    +   R  Q+DA
Sbjct: 515 REFRVIDSTDSVEKLRKKLKNEQLEQYGDSFIP---EFVYKAIQPLPAFASMRRGHQQDA 571

Query: 308 QEFLSFIMDQMHDELLKLQGESTSINGA-----NTALVSLAEE----DEWETVGPKNKSA 358
           QEFL  I++ + +E  ++    T+ NGA      ++  S+AE     D W  VG + ++ 
Sbjct: 572 QEFLGLILNAIDEECAQVMSSGTA-NGAPEVRPTSSAASVAESQDGVDGWFEVGSRQRAV 630

Query: 359 VTRTQ-SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 417
            TR+      + ++ +F GQ +S ++  G K S T +PF  L LDI +  ++ + DA++ 
Sbjct: 631 ETRSSGGSQTTPITRLFSGQYRSELRRPGVKDSVTTEPFQSLQLDIGAPYINNVVDAIKG 690

Query: 418 FSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 477
            + PE L+       G+A  +T  K   I+TL  ILILHL RF + ++G+TK+ K V + 
Sbjct: 691 LTLPERLQ-------GDAAPMT--KQTLIETLPPILILHLKRFKFDTEGTTKIGKKVGYA 741

Query: 478 LQLVLGRDLL 487
           L L L  ++L
Sbjct: 742 LDLQLPAEVL 751


>gi|353236272|emb|CCA68270.1| related to Ubiquitin carboxyl-terminal hydrolase 10 [Piriformospora
           indica DSM 11827]
          Length = 814

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 160/317 (50%), Gaps = 54/317 (17%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQE-----LRTRDIPKAGYPTLTAFVGFV 253
           ++PRGL+N+GNLCF NA LQAL+   PF +L  +     L  +   +A  P + A + F+
Sbjct: 403 IVPRGLVNTGNLCFANAILQALVYTPPFWKLFNDIAATGLTAQRTGRAATPMVDATIAFL 462

Query: 254 SDFDT------------PSGGSSKKKNISVLDIGRPFSPSMFEAVLKN-FTP-DVPNSIS 299
           ++F              P+  ++   +     I +P S      + +N FT  ++ NS+ 
Sbjct: 463 NEFKPAFTPIPVDLSAFPTAQAAASMSTPKPAINKPTSSRDSNILPRNSFTASELYNSLK 522

Query: 300 GRP--------RQEDAQEFLSFIMDQMHDEL---LKLQGESTS----------INGANTA 338
            +P         QEDA+EFL F +D +H+EL   L   G+S            I+    A
Sbjct: 523 SKPTFDGMRLGHQEDAEEFLGFFLDALHEELCGLLNALGDSAQADAVKDSDRDIDKLEPA 582

Query: 339 LVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLL 398
           +  + + DEW+ VG +N++ VTRT     SA++ IFGG+ +S+++A G   SA+V+ +  
Sbjct: 583 IDVVQDGDEWQEVGRRNRATVTRTTQGTESAITAIFGGKFRSLLRASGRPDSASVEEWRC 642

Query: 399 LHLDIYSEAVHTIEDALRLFSAPENL-----EGYRTSSTGNAGVVTAKKSVKIQTLSKIL 453
           L LDI    + +IEDAL   SA E +     +GY + +T         K + ++ L  IL
Sbjct: 643 LQLDIQPPHIRSIEDALYALSAVETVTIQSHQGYPSEAT---------KQMFVEHLPPIL 693

Query: 454 ILHLMRFSYGSQGSTKL 470
           ILHL RF Y  Q   ++
Sbjct: 694 ILHLKRFIYDPQTGIEM 710


>gi|395333867|gb|EJF66244.1| cysteine proteinase [Dichomitus squalens LYAD-421 SS1]
          Length = 925

 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 160/318 (50%), Gaps = 43/318 (13%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR----------TRDIPKAGYPTLTA 248
           + PRGL+N+GN+CF NA LQ L+ C PF +   +L+           R+  KA  P + A
Sbjct: 529 IRPRGLVNTGNMCFANAVLQILVYCPPFHRFFSDLKKHLAGPVVGSQREGSKAT-PLVDA 587

Query: 249 FVGFVSDF--DTPS-----------GGSSKKKNISVLDIGRPFSPS-MFEAVL--KNFTP 292
            + F+ +F  D P+           G   +  N   LD    F PS +++A+   K F  
Sbjct: 588 TIQFLKEFVPDPPANANVNANMKSKGKEREDDNFDELDS---FIPSYVYDAMKEKKRFA- 643

Query: 293 DVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVG 352
              N I G   QEDA+EFL F +D + +ELL +  +S     A TA    A +D W  VG
Sbjct: 644 ---NMIGGH--QEDAEEFLGFYLDTLEEELLSI-SQSLQPQDAPTAPEEEAHDDGWLEVG 697

Query: 353 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 412
            KNK+  TRT     S ++ IFGG+ +S ++A   + S T++ +  L LDI  E V T+ 
Sbjct: 698 KKNKAVATRTAKSTESPITRIFGGKFRSALRAPHQRESVTIEDWRSLQLDIQPENVKTLR 757

Query: 413 DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 472
           DAL   S P+ ++    +  G   ++ A++ V I+ L  +LILH+ RF Y     TK+  
Sbjct: 758 DALLHISQPQQVQISIPTRPG--ALLDAQQQVLIEALPPVLILHMKRFLY----DTKVGD 811

Query: 473 SVRFPLQLVLGRDLLVTP 490
            V+   Q+    +L V P
Sbjct: 812 VVKVGKQVSFASELDVPP 829


>gi|440795054|gb|ELR16195.1| Ubiquitin carboxylterminal hydrolase [Acanthamoeba castellanii str.
           Neff]
          Length = 649

 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 93/279 (33%), Positives = 148/279 (53%), Gaps = 42/279 (15%)

Query: 202 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           RGL N GN CFLNAT+Q L++C PF+  L+ LR R +P          V F   F+    
Sbjct: 330 RGLHNEGNTCFLNATVQCLLACPPFIGFLRSLRGRGLP----------VRFAEAFEL--- 376

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRP-RQEDAQEFLSFIMDQMHD 320
              KK N  ++ +    + + F AV+K         ++G P RQEDA EFLS ++D +H+
Sbjct: 377 --EKKANTQLVPLA---AKAHFAAVIKK--------LAGTPGRQEDAHEFLSLLLDTVHE 423

Query: 321 ELLKLQGES-----TSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
           EL     ++     +  +GA+    +  E +EW  VG KNK++  RT  F  +A++ IFG
Sbjct: 424 ELRAGSAKARAGGGSGESGAHHKTAAHNETNEWNEVGRKNKTSKLRTAEFEDTAVTRIFG 483

Query: 376 GQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 435
            +L+S +K++G K S T + F  L LD+    + +++DAL  F + E+L+          
Sbjct: 484 CKLRSCLKSRGAKQSITQELFNALPLDVSVHQIRSLDDALLGFMSAESLDWE-------- 535

Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSV 474
             V A K  K + +  +L++HL RF++ + G  K+ K +
Sbjct: 536 --VRASKEYKFERMPGVLVVHLKRFAFSAAGGDKIAKHI 572


>gi|320590158|gb|EFX02601.1| ubiquitin c-terminal hydrolase [Grosmannia clavigera kw1407]
          Length = 926

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 155/308 (50%), Gaps = 55/308 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVS 254
           SV  + PRGLIN+GN+C++N+ LQ L+ C+PF   L +    D+ + G            
Sbjct: 490 SVAFIEPRGLINTGNMCYMNSVLQVLIFCTPFYDFLDQ--NDDLERYG------------ 535

Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
           D  TP       K +S  +  R                        R  Q+DA+EFL F+
Sbjct: 536 DAFTPEFVYEAIKQLSRFESMR------------------------RGHQQDAEEFLGFL 571

Query: 315 MDQMHDELLKL-QGESTSINGANTALVS-----------LAEEDEWETVGPKNKSAVTRT 362
           ++ +++E  K+ Q  S + N ++T + +           L+  D W  VGP+ ++A+TR+
Sbjct: 572 LECLNEECTKVVQDSSRATNPSSTQVTTPTASVTSEIPDLSGGDGWLEVGPRQRAAITRS 631

Query: 363 QSFLPSA-LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
                S+ ++ IF G+L+S ++  G K S T++P+  L LDI S  V  I DALR  + P
Sbjct: 632 SGHTSSSPVNSIFSGKLRSELRVPGLKDSVTLEPYQSLQLDIDSPQVRNILDALRGLTKP 691

Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQ 479
           E L G   S  G    V+  K V I+TL  +LILHL RF +  Q  G+ K+ K + +PL+
Sbjct: 692 EVLNGDFGSPHGKD--VSVTKQVFIETLPPVLILHLKRFQFDWQGNGTVKIWKKIGYPLE 749

Query: 480 LVLGRDLL 487
           L + R++ 
Sbjct: 750 LEIPREIF 757


>gi|198465534|ref|XP_001353673.2| GA16935 [Drosophila pseudoobscura pseudoobscura]
 gi|198150201|gb|EAL31187.2| GA16935 [Drosophila pseudoobscura pseudoobscura]
          Length = 1717

 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 159/315 (50%), Gaps = 40/315 (12%)

Query: 199  LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 251
            L PRGL N  N C++N+ LQAL+ CSPF  LL     R IPK          PT+ A + 
Sbjct: 1308 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSDVKTPTVNAMMS 1362

Query: 252  FVSDFDT-PSG-----------GSSKKKNI---SVLDIGRPFSPSMFEAVLKNFTPDVPN 296
            F+++F + PSG             +K K+    + L     F P+    + K +      
Sbjct: 1363 FMTNFSSLPSGLRLRLNTLNKAAQNKGKDEFAGTDLQCDIAFEPT---DIYKLWNDSREE 1419

Query: 297  SISGRPRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETV-G 352
             + G  RQEDA+EFL +++++++DE+L   KL  +            S    + W+ +  
Sbjct: 1420 HVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIAKPVPQQNGQEQPESEDGGEVWQKICN 1477

Query: 353  PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 412
             +NK +VTR   F  + +SDIF G+L+S ++ +G  ++  +QPF  L L+I  E   +++
Sbjct: 1478 NRNKGSVTRQTDFGRTPISDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 1535

Query: 413  DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 472
            +AL +    + +EG   S T     V A K + ++ L  +LILHL  F Y S G TK+ K
Sbjct: 1536 EALEILVGRDQIEGVTGSKTKQE--VVAWKQMTLEKLPVVLILHLKYFDYRSDGCTKILK 1593

Query: 473  SVRFPLQLVLGRDLL 487
             V FP +L +   +L
Sbjct: 1594 KVEFPAELKIDAKIL 1608


>gi|195175018|ref|XP_002028260.1| GL16888 [Drosophila persimilis]
 gi|194117392|gb|EDW39435.1| GL16888 [Drosophila persimilis]
          Length = 1195

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 159/315 (50%), Gaps = 40/315 (12%)

Query: 199  LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 251
            L PRGL N  N C++N+ LQAL+ CSPF  LL     R IPK          PT+ A + 
Sbjct: 786  LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSDVKTPTVNAMMS 840

Query: 252  FVSDFDT-PSG-----------GSSKKKNI---SVLDIGRPFSPSMFEAVLKNFTPDVPN 296
            F+++F + PSG             +K K+    + L     F P+    + K +      
Sbjct: 841  FMTNFSSLPSGLRLRLNTLNKAAQNKGKDEFAGTDLQCDIAFEPT---DIYKLWNDSREE 897

Query: 297  SISGRPRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETV-G 352
             + G  RQEDA+EFL +++++++DE+L   KL  +            S    + W+ +  
Sbjct: 898  HVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIAKPVPQQNGQEQPESEDGGEVWQKICN 955

Query: 353  PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 412
             +NK +VTR   F  + +SDIF G+L+S ++ +G  ++  +QPF  L L+I  E   +++
Sbjct: 956  NRNKGSVTRQTDFGRTPISDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 1013

Query: 413  DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 472
            +AL +    + +EG   S T     V A K + ++ L  +LILHL  F Y S G TK+ K
Sbjct: 1014 EALEILVGRDQIEGVTGSKTKQE--VVAWKQMTLEKLPVVLILHLKYFDYRSDGCTKILK 1071

Query: 473  SVRFPLQLVLGRDLL 487
             V FP +L +   +L
Sbjct: 1072 KVEFPAELKIDAKIL 1086


>gi|328854199|gb|EGG03333.1| ubiquitin C-terminal hydrolase [Melampsora larici-populina 98AG31]
          Length = 692

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/323 (32%), Positives = 156/323 (48%), Gaps = 49/323 (15%)

Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR--TRDIPKAGYPTLTAFVG 251
           K V  ++PRGLIN+GN+CF NA LQ L+ C PF  LL+ L   T    K+  P L A +G
Sbjct: 291 KHVPFIVPRGLINNGNICFANAILQVLVYCVPFYNLLKHLNLYTSHDFKSQTPLLDAMIG 350

Query: 252 FVSDFDT-PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR------ 303
           F+++F++ P       K+    ++ R   P+  + + + F  + V  +  G  R      
Sbjct: 351 FINEFESIPLSELEPIKDPKTSNVLRYHLPTHLKKIGEPFIAESVWIATKGNSRFDAMRG 410

Query: 304 --QEDAQEFLSFIMDQMHDELL--------------KLQGESTSINGANTALVSLAEE-- 345
             QEDAQEFL F +D +H+ELL              +L   +T+    +  L   A E  
Sbjct: 411 GQQEDAQEFLCFFLDTLHEELLTAIDRHDGPIRLRQQLADAATNTTNKDNHLKPPANELD 470

Query: 346 ------DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLL 399
                 D W  VG K + +VTR+   + S L+ IFG   +S++     K S T +P  +L
Sbjct: 471 QPNSSSDGWMEVGSKGRPSVTRSTDSILSPLTSIFGFNTRSILHKPKQKDSVTFEPNNML 530

Query: 400 HLDIYSEAVHTIEDALRLFSAPE------NLEGYRTSSTGNAGVVTAKKSVKIQTLSKIL 453
            L I S  + TIE+AL  FS PE      N  G ++S+T         K + I++   + 
Sbjct: 531 QLSIESPNIKTIEEALLNFSTPEIISDMMNKNGIKSSAT---------KQIFIESFPPVF 581

Query: 454 ILHLMRFSYGSQGSTKLHKSVRF 476
           ILHL RF Y      K  KS++F
Sbjct: 582 ILHLKRFGYFEGEVKKNSKSIKF 604


>gi|343424851|emb|CBQ68389.1| related to Ubiquitin carboxyl-terminal hydrolase 10 [Sporisorium
           reilianum SRZ2]
          Length = 919

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 118/361 (32%), Positives = 159/361 (44%), Gaps = 80/361 (22%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK---AGYPTLTAFVGFVSDFD 257
           PRGL+N GN CF NA LQAL+ C+PF  L   L  R++P       P + A + F+ +F 
Sbjct: 378 PRGLVNKGNFCFANAILQALVYCAPFYNLF-SLVGREVPADFGNATPLMEAVIHFLREFH 436

Query: 258 TPSGGSSKKKNISVL--DIGRPFSPS-MFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
               GSS   +   L  D   PF P  +++A+  N   D       R  QEDAQEFL F 
Sbjct: 437 PVHTGSSHALDSPQLAHDASEPFVPEFVYDAMRLNKRFDQ----MRRGHQEDAQEFLGFF 492

Query: 315 MD-----------------------------QMHDELLKLQG---------------EST 330
           +D                              M DE  KL G               + +
Sbjct: 493 LDTLHEELISAQRRSAIKLAHSAGGPNGLLANMSDEDKKLNGVSDDDLRRLGVRVGKQDS 552

Query: 331 SINGANTALVSLAEEDE----------------WETVGPKNKSAVTRTQSFLPSALSDIF 374
           + +     L S  + DE                W  VG K K+A TRT S   S ++ IF
Sbjct: 553 AADAIGLGLDSAFDPDEIVEREVLRPVSPSEEGWMEVGQKGKTAYTRTTSTSESPITRIF 612

Query: 375 GGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 434
           GG+L+SV+K  G K S T++P+  L LDI    V +IEDAL   + PE + G  + S   
Sbjct: 613 GGKLRSVLKTPGAKDSVTLEPYQPLQLDIQPAHVQSIEDALLHLTEPEIIPGVWSPS--R 670

Query: 435 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEV 494
           A  V A K V +++L  +L+LHL RF Y   G  +     + P  L  G  L + P  EV
Sbjct: 671 AAEVDATKQVFVESLPPVLVLHLKRFIYDEIGGVQ-----KSPKPLSYGTTLEIAP--EV 723

Query: 495 L 495
           L
Sbjct: 724 L 724


>gi|328768046|gb|EGF78093.1| hypothetical protein BATDEDRAFT_35737 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 659

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/327 (33%), Positives = 165/327 (50%), Gaps = 35/327 (10%)

Query: 197 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRT--RDIPKAGYPTLTAFVGFVS 254
           K + PRGL N GN+CF+NA LQ L+ C PF   L+      +   K+  P + + +  ++
Sbjct: 274 KLIRPRGLKNGGNMCFMNAILQPLIHCPPFYNFLKMYENIFKHSFKSTTPLIDSMLQLLN 333

Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
           +F        +   I +    + + P + E V  +      +  S + RQEDA+EFL F+
Sbjct: 334 EFK-----EEEPNTIPLPPATKDYRPFVGEYVY-DVLRKSKHIESQKGRQEDAEEFLGFL 387

Query: 315 MDQMHDELLKLQG------ESTSINGANTALVSLAEE------------------DEWET 350
           ++ +H+ELL++        ES S++    +   +A +                  D W  
Sbjct: 388 LEGLHEELLRVDNAQEKARESRSMDSHRLSNGMIAPQTTSPTRGAIVDGECTITADTWME 447

Query: 351 VGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHT 410
           VG K K   TRT     +A++ IFGGQ++S VK+ G+K S T +PF  L LDI S  V+T
Sbjct: 448 VGKKKKVQPTRTVQVKTTAIARIFGGQMRSAVKSFGSKDSTTSEPFQALQLDITSPTVNT 507

Query: 411 IEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-K 469
           IEDALR  + PE +EGY TSS        A K   ++ L  +LILHL RF Y S G T K
Sbjct: 508 IEDALRELTLPEVIEGY-TSSEHPDVSSNATKQTFLEVLPAVLILHLKRFVYDSVGGTLK 566

Query: 470 LHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           + K + +  +L +  D+L  PS    Q
Sbjct: 567 VSKHIAYSTELKISTDILA-PSVRATQ 592


>gi|427794549|gb|JAA62726.1| Putative ubiquitin carboxyl-terminal hydrolase 10, partial
           [Rhipicephalus pulchellus]
          Length = 741

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 165/338 (48%), Gaps = 33/338 (9%)

Query: 114 IKNSTNGPALSNG---VNHLKADGIDFSSFHQNAGGHANPS-PISKFHVLCDGNIDGRDQ 169
           ++ S   P + NG        AD     S     G    P  P S+     DG     D 
Sbjct: 363 VEESAAAPPVVNGSGSATRCWADLFKKGSSEAEGGNKRQPVVPFSR-----DGVTSDCDD 417

Query: 170 NAAACNSSISGSKEVPM-KAINE-PVKSVKDLL-PRGLINSGNLCFLNATLQALMSCSPF 226
               C  S+  S +  + +A+++  V     L+ PRGL N  N C++NA LQAL++C  F
Sbjct: 418 EVRPCRPSVPESVDTRLGRALHKFTVNHTPPLIQPRGLENGKNWCYINANLQALLACPAF 477

Query: 227 VQLLQELR-TRDIPKA-GYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFE 284
             LL  L     +P +   P +   + F+  +  P    + KK+   L + + + P  F 
Sbjct: 478 YNLLYSLPLVPGLPGSNATPFMECLIYFLQTYAVPMVRETGKKD--ELVVAKAYDPEHFR 535

Query: 285 AVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLK-LQGESTSING--------- 334
            +L    PD       + +QEDA+EFLSF+++ +HDE++  ++  S  +NG         
Sbjct: 536 DLLMKIKPDC-----KKGKQEDAEEFLSFMLNGLHDEMVSSMRSVSNGLNGQCNGEAQPP 590

Query: 335 ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQ 394
              A     +E  W+TV  +N+  VTR+  +LPS L DIFGG+++S V A G + SA++Q
Sbjct: 591 VEHADDDDDDEGAWKTVIHRNRHQVTRSAEYLPSPLMDIFGGEMRSSVTADG-ETSASLQ 649

Query: 395 PFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSST 432
           PF  L LDI  + V T+EDAL   +A E ++ Y +S +
Sbjct: 650 PFFTLQLDI-QDGVKTVEDALLHLAAEEKVQNYHSSKS 686


>gi|320168898|gb|EFW45797.1| hypothetical protein CAOG_03781 [Capsaspora owczarzaki ATCC 30864]
          Length = 517

 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 106/319 (33%), Positives = 164/319 (51%), Gaps = 32/319 (10%)

Query: 197 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTRDIPKAGYPTLTAFVGFVS 254
           ++  PRGL+N GN C++N  LQ L++  P   LL   ELR+  + +  Y    A      
Sbjct: 95  REFQPRGLVNKGNACYINTVLQVLLATPPVHALLHHAELRSFLLQQNAYDEYLA-----R 149

Query: 255 DFDTPSGGSSKKKNISVLDIGR-----------------PFSPSMFEAVLKNFTPDVPNS 297
              +P+  + +   + +  + R                 PF   +    + +    + +S
Sbjct: 150 TMRSPAAVTDRVSRLLLFSLARLSHEFKILTPQAALKEGPFGQPLLPGYVHDAVVHLRSS 209

Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELL----KLQGESTSINGANTALVSLAEEDEWETVGP 353
            S + RQEDA+EFL F++D++H+EL+    K    S+S + +  A+ S A E EWE VG 
Sbjct: 210 DSFQFRQEDAEEFLGFVLDRLHNELVGEMRKSAHFSSSYDVSAAAITSGAAE-EWEEVGK 268

Query: 354 KNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIED 413
           KNK+AVTR      S +S IF G L+S VK +G KAS T+QPF  L L+I   +V+++ D
Sbjct: 269 KNKTAVTRRLDQEASPISQIFRGFLRSSVKQRGVKASDTLQPFYTLPLEITHHSVNSVVD 328

Query: 414 ALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHK 472
           ALR+   PE++ G+  + + +A    A K + ++ L  IL+L L RF Y   G   K  K
Sbjct: 329 ALRVHVLPESISGF--ARSKDALDNEASKQLLLEELPPILVLQLKRFVYDLYGGVQKSLK 386

Query: 473 SVRFPLQLVLGRDLLVTPS 491
            V +P  L L  +L   P+
Sbjct: 387 FVEYPATLDLSTELFSLPA 405


>gi|389748481|gb|EIM89658.1| cysteine proteinase [Stereum hirsutum FP-91666 SS1]
          Length = 1043

 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 179/366 (48%), Gaps = 69/366 (18%)

Query: 177 SISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR 236
           S +  K +  KA ++P K    + PRGL+NSGN+CF NA LQ L+ C PF +L+ EL  +
Sbjct: 604 SAAAGKSLAPKAASQPPK----IRPRGLVNSGNMCFANAVLQLLVYCPPFWKLMTEL-GK 658

Query: 237 DIPKAGYPT------------------------LTAFVGFVSDFDT-----------PSG 261
            +P++  PT                        + A + F+ +F             P+G
Sbjct: 659 LLPESQGPTPGQASGTATPVNGVKVHEEGDTPLVDATIRFLKEFGPVEPKEKEKERRPNG 718

Query: 262 GSSKKKNISVLDIGR-----PFSPS-MFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
               K+     D G       F P+ +++A+ +    D  N   G   QEDA+EF  F +
Sbjct: 719 YGKGKERREQEDEGEGDGLDSFMPTYVYDAMKEKKRFD--NMRGGH--QEDAEEFFGFYL 774

Query: 316 DQMHDELLKLQGESTSINGANTA-----------LVSLAEEDEWETVGPKNKSAVTRTQS 364
           D +     +L    ++IN  + A           +    +E+ W  VG KNKS VTRT  
Sbjct: 775 DTL---EEELLSLLSAINPPSKAEKEKPVNIEEKVEEPPQEEGWMEVGKKNKSVVTRTVK 831

Query: 365 FLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 424
              S ++ IFGG+ +S ++A G + S  V+ +  L LDI  E+VHTI+DAL   S P+++
Sbjct: 832 STESPITRIFGGKFRSTLRAPGQRDSVMVEDWRSLQLDIQPESVHTIKDALARISIPQSV 891

Query: 425 EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY--GSQGSTKLHKSVRFPLQLVL 482
           +   T+ST     V A + + I+ L +IL+LHL RF Y   ++G  KL K V F  +L +
Sbjct: 892 Q--VTNSTTRV-PVEASQQILIEALPRILVLHLKRFLYDVDAKGVVKLGKMVEFGPELDI 948

Query: 483 GRDLLV 488
           G DL+ 
Sbjct: 949 GSDLMA 954


>gi|328715698|ref|XP_001946389.2| PREDICTED: hypothetical protein LOC100160238 isoform 3
           [Acyrthosiphon pisum]
 gi|328715700|ref|XP_003245698.1| PREDICTED: hypothetical protein LOC100160238 isoform 2
           [Acyrthosiphon pisum]
          Length = 922

 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 158/310 (50%), Gaps = 35/310 (11%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR-------TRDIPKAGYPTLTAFVG 251
           L PRGL N    C++NATLQAL++C PF  L++ ++        R   K+  P L + V 
Sbjct: 537 LQPRGLTNRNTRCYINATLQALLTCPPFFNLMRSVQFKLKNRNNRGPQKSQTPILESMVQ 596

Query: 252 FVSDFDTPS---GGSSKKKNIS-------VLDIGRPFSPSMFEAVLKNFTPDVPNSISGR 301
           F+ +F   S   G +++++  +         D G  F PS    +L  F         G 
Sbjct: 597 FIGEFQQLSIKNGRTTQQQRQATSVATQETPDTGPAFEPSYVYKILPAFE-------EG- 648

Query: 302 PRQEDAQEFLSFIMDQMHDELLKL--QGESTSINGANTALV-SLAEEDEWETVGPKNKSA 358
            RQEDA+EF+S++++ ++DE+++L    +S   NG   A V ++   +EW+ V  K+K  
Sbjct: 649 -RQEDAEEFMSYLLNGINDEMIELIKMSKSNISNGETQAEVDAIDNNNEWKEVNGKHK-M 706

Query: 359 VTRTQSFLPSALSDIFGGQLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 417
           VTR      + LS+IF GQL++  VK   N+ +  ++PF  L LDI  E   ++ +AL +
Sbjct: 707 VTRRTVMEKTPLSEIFRGQLRTRTVKNGENEPTENIEPFFTLKLDI--EKAKSVREALDM 764

Query: 418 FSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 477
               + LEG     T     + A + V I  L  +L+LHL  F Y  Q  TK+ K+V F 
Sbjct: 765 LVNKDTLEGLTCPKTNRE--LDAYQQVTIDELPYVLLLHLKCFEYKQQKLTKIVKNVEFS 822

Query: 478 LQLVLGRDLL 487
           + L +   L+
Sbjct: 823 VDLKIEPRLI 832


>gi|328850830|gb|EGF99990.1| ubiquitin C-terminal hydrolase [Melampsora larici-populina 98AG31]
          Length = 659

 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 155/318 (48%), Gaps = 39/318 (12%)

Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR---TRDIPKAGYPTLTAFV 250
           K V  ++PRGLIN+GN+CF NA LQ L+ C PF  LL+ L    T D  K+  P L A +
Sbjct: 258 KHVPFIVPRGLINNGNICFANAILQVLVYCVPFYNLLKHLSLYTTHDF-KSQTPLLDAMI 316

Query: 251 GFVSDFDT-PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---VPNSISGR----- 301
           GF+++F++ P       K+    ++ R   P+  + + + F  +   +   ++ R     
Sbjct: 317 GFINEFESIPLSELEPIKDPKTSNVLRYHLPTYLKKIGEPFIAESVWIATKVNSRFDAMR 376

Query: 302 -PRQEDAQEFLSFIMDQMHDELL--------------KLQGESTSINGANTALVSLAEE- 345
             +QEDAQ+FL F +D +H++LL              +L G + +    +  +   A E 
Sbjct: 377 GGQQEDAQKFLCFFLDTLHEKLLSAIERHDGLIRLRQQLAGAAPNATNKDNLIKPPANEL 436

Query: 346 -------DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLL 398
                  D W  VG K + +VTR+   + S L+ IFG   +S++     K S T +P  +
Sbjct: 437 DQPNPSSDGWMEVGSKGRPSVTRSTDSISSPLTSIFGFNTRSILHKPKQKDSVTFEPNNM 496

Query: 399 LHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLM 458
           L L I S  + TIE+AL  FS PE +    T    N    +A K + I++   + ILH  
Sbjct: 497 LQLSIESPNIKTIEEALLNFSTPEIISDMMTK---NGIKSSATKQIFIESFPPVFILHSK 553

Query: 459 RFSYGSQGSTKLHKSVRF 476
           RF Y      K  KS++F
Sbjct: 554 RFGYFEGEVKKNSKSIKF 571


>gi|393220282|gb|EJD05768.1| cysteine proteinase [Fomitiporia mediterranea MF3/22]
          Length = 1072

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 151/308 (49%), Gaps = 22/308 (7%)

Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---------RTRDIPKAGYPTL 246
           V  + PRGL+N+GN+CF NA LQ L+   PF +L  EL                   P +
Sbjct: 516 VPQIRPRGLVNTGNMCFANAVLQTLVYTPPFFRLFTELGKFIDGTGPNATKWAGKDTPLV 575

Query: 247 TAFVGFVSDFDTPSGGSSK--KKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQ 304
            A V F+ +F      SS+  +++    D    F PS     +K  +    N   G+  Q
Sbjct: 576 DATVEFLKEFKPKVKDSSRDSQEDDEDYDAIDSFIPSYVYDAMKEKS-RFDNMGGGQ--Q 632

Query: 305 EDAQEFLSFIMDQMHDELLKLQG---ESTSINGANTALVSLAEEDEWETVGPKNKSAVTR 361
           EDA+EF  F +D + +ELL +     + + I  +     S +E D+W  VG KNK  V R
Sbjct: 633 EDAEEFFGFFLDTLEEELLAISKSLTDGSQIKSSGQERNS-SEGDDWLEVGKKNKPVVAR 691

Query: 362 TQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
           +   + S ++ IFG + +S +K  G + S  V+ +  L LDI  E V +IEDALR  S P
Sbjct: 692 STKSVDSPMTRIFGFKFRSTLKVPGQRDSVMVEDWKSLKLDIQREQVESIEDALRYISHP 751

Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQ 479
           + ++   +S T    +V A + V + TL  IL+ HL RF Y +      K+HK V +  +
Sbjct: 752 QPVQ--MSSVTKGGALVEASQQVLVDTLPPILVCHLKRFLYDTTAKDVIKVHKQVTYGPE 809

Query: 480 LVLGRDLL 487
           L +  D +
Sbjct: 810 LEVPSDAI 817


>gi|388855962|emb|CCF50537.1| related to Ubiquitin carboxyl-terminal hydrolase 10 [Ustilago
           hordei]
          Length = 901

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 161/364 (44%), Gaps = 91/364 (25%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK---AGYPTLTAFVGFVSDF- 256
           PRGL+N GN CF NA LQ L+ C+PF  L   L  R +P       P + A + F+ +F 
Sbjct: 363 PRGLVNKGNFCFANAILQTLVYCAPFYNLFN-LIARQVPADFGNATPLMEAVIHFLREFL 421

Query: 257 --------DTP---SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 305
                   D+P    GGS+   +  +L         +++A+  N   D       R  QE
Sbjct: 422 PADAANAIDSPFPGHGGSAAAASEPIL------PEYVYDAMRLNKRFDQMR----RGHQE 471

Query: 306 DAQEFLSFIMDQMHDELL----------------------KLQGESTSING--------- 334
           DA+EFL F +D +H+EL+                      K+  E   +NG         
Sbjct: 472 DAEEFLGFFLDTLHEELIAAQRKSAIKLAQSAGGPNGLLAKMSEEEKKLNGVSDDDLRRL 531

Query: 335 ---------ANTAL---------------------VSLAEEDEWETVGPKNKSAVTRTQS 364
                    A  AL                     VS +EE  W  VG K K+A TRT S
Sbjct: 532 GVRVGKQGAAGDALGLDLEAVLDENEIIEREVMRPVSPSEEG-WMEVGQKGKTAYTRTTS 590

Query: 365 FLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 424
              S ++ IFGG+L+SV+K  G K S T++P+  L LDI    V +IEDAL   + PE +
Sbjct: 591 TSESPITRIFGGKLRSVLKTPGAKDSVTLEPYQPLQLDIQPAHVQSIEDALFHLNEPETI 650

Query: 425 EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQLVLG 483
            G  + S G    V A K V I++L  +L+LHL RF Y   G   K  K + +   L + 
Sbjct: 651 PGVWSPSRG--AEVDATKQVFIESLPPVLVLHLKRFIYDEIGGVQKSQKPLSYGTTLEIA 708

Query: 484 RDLL 487
            ++L
Sbjct: 709 PEVL 712


>gi|169594854|ref|XP_001790851.1| hypothetical protein SNOG_00156 [Phaeosphaeria nodorum SN15]
 gi|160700955|gb|EAT91651.2| hypothetical protein SNOG_00156 [Phaeosphaeria nodorum SN15]
          Length = 862

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 155/309 (50%), Gaps = 35/309 (11%)

Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVG 251
           K V  L PRGLI           LQ L+ C PF   L ++  R +   K+  P + A + 
Sbjct: 411 KKVTFLEPRGLI-----------LQVLLFCVPFYDFLDQVAKRAVHSFKSETPLVDALIM 459

Query: 252 FVSDFD-TPSGGSSKKKNISVLD-----IGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 305
           F+ DF    S  + +K  + + D      G P +P     V++   P   N   G+  QE
Sbjct: 460 FMRDFKLIDSAATVEKLRLRLKDKELEQYGDPLTPEYVYDVIRRL-PRFDNMKRGQ--QE 516

Query: 306 DAQEFLSFIMDQMHDE---LLKLQGESTSINGANTALVSLAEEDE--WETVGPKNKSAVT 360
           DA+EFL F++  +HDE   ++K   ++   NG  +     +E  +  W  VG K KSA T
Sbjct: 517 DAEEFLGFLLAGLHDEAAHIIKSDKQNQVSNGVTSPSAEQSESVDGGWMEVGAKQKSANT 576

Query: 361 RTQSFLP--SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLF 418
           ++   +   + ++ IFGG+L+S  K  G KAS T++P+  L LDI    ++ I DAL+  
Sbjct: 577 QSSGAIEFETPITKIFGGKLRSEYKKPGEKASVTLEPYQPLQLDIGEPNINNISDALKNL 636

Query: 419 SAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
           +  E L+G         G   + K V I++L  +LILHL RF Y +QG  K+ K V +PL
Sbjct: 637 TRLETLDG------AVRGARASTKQVHIESLPPVLILHLKRFHYDAQGPQKIWKKVGYPL 690

Query: 479 QLVLGRDLL 487
           +L + +++ 
Sbjct: 691 ELEIPKEVF 699


>gi|66820366|ref|XP_643807.1| ubiquitin hydrolase B [Dictyostelium discoideum AX4]
 gi|74893995|sp|O96612.1|UBPB_DICDI RecName: Full=Ubiquitin hydrolase B
 gi|4028549|gb|AAC97115.1| ubiquitin hydrolase B [Dictyostelium discoideum]
 gi|60471837|gb|EAL69791.1| ubiquitin hydrolase B [Dictyostelium discoideum AX4]
          Length = 451

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/196 (42%), Positives = 116/196 (59%), Gaps = 14/196 (7%)

Query: 296 NSISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAEEDEWE 349
           NS+     Q+DAQEFL F++D +H+E L L        E       +T++V    +D WE
Sbjct: 191 NSLPQTICQQDAQEFLVFLLDLIHEEFLTLIKDIDIPKEDDKSTPTSTSIV----DDNWE 246

Query: 350 TVGPKNKSAV-TRTQSFLP-SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEA 407
            VG K K+A+ T +Q  LP + +S IF G L+S     G+K S TV+PF  LHLDI  E 
Sbjct: 247 VVGKKGKTAIITNSQQELPKTPISQIFSGVLRSSFNRTGSKESITVEPFYCLHLDIRPEE 306

Query: 408 VHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS 467
           ++++EDAL+ F  PE +EGY T ST     ++A KS   ++L +ILI+H  RF++ S  S
Sbjct: 307 INSLEDALKFFMKPEIIEGY-TCSTKKIE-ISASKSWSFESLPRILIVHFKRFAFESDTS 364

Query: 468 TKLHKSVRFPLQLVLG 483
            KL K +RFP QL L 
Sbjct: 365 KKLDKLIRFPTQLSLS 380



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 3/56 (5%)

Query: 202 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-YPTLTAFVGFVSDF 256
           RGLIN+ N CF+N  LQ+L  C  F+++++ L   D+   G YPTL +F  F +++
Sbjct: 19  RGLINTSNTCFMNVILQSLTGCQLFLRVIKNL--SDLEDLGKYPTLHSFNQFYTEY 72


>gi|198427145|ref|XP_002120858.1| PREDICTED: similar to ubiquitin specific peptidase 10 [Ciona
           intestinalis]
          Length = 714

 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 157/315 (49%), Gaps = 41/315 (13%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRT----RDIPKAGYPTLTAFVGFVS 254
            +PRGL N+ N C++NATLQAL+ C PF Q L+ + T            P + +F+   S
Sbjct: 335 FIPRGLTNTSNWCYINATLQALLVCPPFYQFLKSISTFTPLSQKTVTCSPIIDSFLQLAS 394

Query: 255 DF---DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 311
           +F    T  G  +K+     +  G PF P     +L      + +S+S + RQEDA+EF 
Sbjct: 395 EFRPLSTKRGFVTKE-----VRHGPPFEPRYIYDMLTL----IKSSLSEKGRQEDAEEFQ 445

Query: 312 SFIMDQMHDELLKL-------------QGESTSINGANTA---LVSLAEEDEWETV--GP 353
           S +++ +H+E+ +L             +  S   + ++T+   +   AE++EWE V    
Sbjct: 446 SCVLNGLHEEMTQLFTYLNDSANSQSPESHSEQDDSSSTSEELMNGDAEKEEWEEVMATK 505

Query: 354 KNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIED 413
           KNKSAVTR      + +SD+F G+L + V   G K S + +PF  L L + ++    ++D
Sbjct: 506 KNKSAVTRRADDTRTPISDMFRGELCTSVFRPGQKVSVSYEPFFSLPLSVPADHACNVDD 565

Query: 414 ALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG-SQGSTKLHK 472
           AL   +  E+            G   A +   +++L  I ILHL RF Y  S G  K+ K
Sbjct: 566 ALMSLTDKESFLA------DGEGQSDASRQQTLESLPPIFILHLKRFVYDKSGGLKKIDK 619

Query: 473 SVRFPLQLVLGRDLL 487
            V +   +V+G+++L
Sbjct: 620 KVEYKTDMVIGKEML 634


>gi|410076176|ref|XP_003955670.1| hypothetical protein KAFR_0B02370 [Kazachstania africana CBS 2517]
 gi|372462253|emb|CCF56535.1| hypothetical protein KAFR_0B02370 [Kazachstania africana CBS 2517]
          Length = 829

 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 110/332 (33%), Positives = 157/332 (47%), Gaps = 67/332 (20%)

Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPTLTAFVG 251
           +K + PRG+IN+ N+CFL++ LQ L+ C PF+ +L  L TR+    I  +    L A + 
Sbjct: 386 LKSIFPRGIINTANVCFLSSVLQVLLYCQPFIDVLNVLSTRNVHSRIASSQSKLLDACIT 445

Query: 252 FVSDFDTPSGGSSKKKNISVLD-IGRPFSPSMFEAVLKNFTPD-VPNSISGRPR------ 303
               FD  +   SKK+  SV D I        + +V+    PD    +IS  P+      
Sbjct: 446 IYKQFDRENFLESKKRQQSVEDEIEDNEKTPTYGSVIDAINPDEFYRTISTIPKFKDLQW 505

Query: 304 --QEDAQEFLSFIMDQMHDELL---------KLQGESTSINGA----------------- 335
             QEDA+EFL+ ++DQ+H+EL+         ++Q    SIN                   
Sbjct: 506 GQQEDAEEFLTHLLDQLHEELVASINLLSENEIQNILQSINDQELKVFFIRNLSRFKKSE 565

Query: 336 --NTALVSLAE-------------EDEWETVG------PKNKSAVTRTQSFLPSALSDIF 374
             N A V L E             ED W  V        KNK+A  RT   +PS +S +F
Sbjct: 566 FLNNASVQLQELISKYGNASEENEEDGWHEVSSSGKRSKKNKTAAKRTVEVIPSPISKLF 625

Query: 375 GGQLKSVVKAQGNKA--SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSST 432
           GGQ +SV+    NK   S T+ PF  + LDI   +V  +E A + FS  E L  +RTSS 
Sbjct: 626 GGQFRSVLDIPNNKERQSITLDPFQTIQLDISDSSVIDLEGAFKKFSEFE-LIPFRTSSG 684

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGS 464
            +   V AKK   I  L ++L++ L RFS+ S
Sbjct: 685 TD---VEAKKQTFIDKLPEVLLIQLKRFSFVS 713


>gi|261193134|ref|XP_002622973.1| ubiquitin C-terminal hydrolase [Ajellomyces dermatitidis SLH14081]
 gi|239589108|gb|EEQ71751.1| ubiquitin C-terminal hydrolase [Ajellomyces dermatitidis SLH14081]
          Length = 907

 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 163/311 (52%), Gaps = 51/311 (16%)

Query: 199 LLPRGLINSGNLCFLNA------TLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVG 251
           + PRGL+N+GN+C++N+       L  L +  PF +  ++E R  D              
Sbjct: 446 IEPRGLLNTGNMCYMNSISLPLLLLPLLTAIPPFRIMFMREFRVID-------------- 491

Query: 252 FVSDFDTPSGGSSKKKNISV----LDI-GRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
                   +  S +K  + +    L++ G  F P     V+++  P   +   G   Q+D
Sbjct: 492 --------AATSVEKLRLRLKQNELELYGESFIPEYVYQVIRHL-PRFRDMRRGH--QQD 540

Query: 307 AQEFLSFIMDQMHDELLKLQGESTS----INGANTA-LVSLAEE---DEWETVGPKNKSA 358
           AQEFL F+++++HDE  +   ++TS    I+ A  A  VS   E   + W  VG K K A
Sbjct: 541 AQEFLGFLLEELHDECTQAVKQATSTASDISTAVEADFVSATSEPSVEGWLEVGHKQKPA 600

Query: 359 VTRTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALR 416
           +TR+   +   S ++ IFGG+L+S  +  GNK S T++P+  L LDI S  V+ I DAL+
Sbjct: 601 ITRSSGHISAESPITKIFGGKLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALK 660

Query: 417 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSV 474
             + PE ++G   SS G    VTA K V I++L  +LILHL RF Y   ++G+ K+ K V
Sbjct: 661 GLTKPETMQGDFNSSRGPK--VTATKQVFIESLPPVLILHLKRFQYDNVTKGTQKIWKKV 718

Query: 475 RFPLQLVLGRD 485
            +PL+L L ++
Sbjct: 719 GYPLELELPKE 729


>gi|239613681|gb|EEQ90668.1| ubiquitin C-terminal hydrolase [Ajellomyces dermatitidis ER-3]
          Length = 906

 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 159/306 (51%), Gaps = 41/306 (13%)

Query: 199 LLPRGLINSGNLCFLNA------TLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVG 251
           + PRGL+N+GN+C++N+       L  L +  PF +  ++E R  D   +          
Sbjct: 445 IEPRGLLNTGNMCYMNSISLPLLLLPLLTAIPPFRIMFMREFRVIDAATS---------- 494

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 311
            V           + K   +   G  F P     V+++  P   +   G   Q+DAQEFL
Sbjct: 495 -VEKLRL------RLKQNELELYGESFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEFL 544

Query: 312 SFIMDQMHDELLKLQGESTS----INGANTA-LVSLAEE---DEWETVGPKNKSAVTRTQ 363
            F+++++HDE  +   ++TS    I+ A  A  VS   E   + W  VG K K A+TR+ 
Sbjct: 545 GFLLEELHDECTQAVKQATSTASDISTAVEADFVSATSEPSVEGWLEVGHKQKPAITRSS 604

Query: 364 SFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
             +   S ++ IFGG+L+S  +  GNK S T++P+  L LDI S  V+ I DAL+  + P
Sbjct: 605 GHISAESPITKIFGGKLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTKP 664

Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQ 479
           E ++G   SS G    VTA K V I++L  +LILHL RF Y   ++G+ K+ K V +PL+
Sbjct: 665 ETMQGDFNSSRGPK--VTATKQVFIESLPPVLILHLKRFQYDNVTKGTQKIWKKVGYPLE 722

Query: 480 LVLGRD 485
           L L ++
Sbjct: 723 LELPKE 728


>gi|260949681|ref|XP_002619137.1| hypothetical protein CLUG_00296 [Clavispora lusitaniae ATCC 42720]
 gi|238846709|gb|EEQ36173.1| hypothetical protein CLUG_00296 [Clavispora lusitaniae ATCC 42720]
          Length = 933

 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 155/318 (48%), Gaps = 61/318 (19%)

Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG----YPTLTAFVGFV 253
           ++ PRGL NSGN+C++NA LQ L+ C PF +LL+ ++ + I   G     P L A + F+
Sbjct: 504 EVKPRGLTNSGNICYMNAVLQCLVMCEPFNKLLRHVQEKSIGTLGKTSPTPLLDATISFI 563

Query: 254 SDF-DTPSGGSSKKKNISVLD-----IGRPFSP-SMFEAVLKNFTPDVPNSISGRPRQED 306
            DF + P   SS K N+S L+     +G+P SP S++  +++N  P   +   G  +QED
Sbjct: 564 EDFINIP---SSSKPNVSSLNSEGIVVGKPLSPESLYMKLIEN--PKFKHLKWG--QQED 616

Query: 307 AQEFLSFIMDQMHDEL--------------------------------LKLQGESTSING 334
           A+EFL +++D +H+E                                 LK++  +  +  
Sbjct: 617 AEEFLGYLLDGLHEEFVKAEASVSPEMLEMLYNKYSQSLDPHLAEQLKLKMKSGARLVRS 676

Query: 335 ANTALVSLAEEDE-----WETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKA 389
             +  V  +EE E     W  VG   K    R     PS +++IFGG  +SV+     K 
Sbjct: 677 TESKEVEDSEESEGDHSGWSEVGSGKKVNKKRVMEVEPSPITEIFGGSFRSVLTVPKAKV 736

Query: 390 SA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQ 447
           S   T+ P+  + +DI  + + TIEDAL   +  E +  Y+  +      V A+K   I+
Sbjct: 737 SQSITIDPYRSIQVDISHKEIETIEDALLRITEVEKI-PYKIEA---GKEVIARKQSFIE 792

Query: 448 TLSKILILHLMRFSYGSQ 465
            L ++LIL L RFS+  Q
Sbjct: 793 KLPQVLILQLKRFSFEHQ 810


>gi|443896840|dbj|GAC74183.1| ubiquitin-specific protease [Pseudozyma antarctica T-34]
          Length = 854

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 148/343 (43%), Gaps = 84/343 (24%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA---GYPTLTAFVGFVSDF- 256
           PRGL+N GN CF NA LQ L+ C+PF  L   L   ++P       P + A + F+ +F 
Sbjct: 335 PRGLVNKGNFCFANAILQTLVYCAPFYNLFT-LVGNEVPADFGNATPLMEAVIHFLREFL 393

Query: 257 ---------DTPSGGSSKKKNISVLDIGRPFSPS-MFEAVLKNFTPDVPNSISGRPRQED 306
                    D P  G       +      PF P  +++A+  N   D       R  QED
Sbjct: 394 PADASHALNDGPLPGQDASTAAAA---SEPFLPEFVYDAMRLNKRFDQ----MRRGHQED 446

Query: 307 AQEFLSFIMDQMHDELLKLQGEST-----SINGANTALVSLA------------------ 343
           A+EFL F +D +H+EL+  Q  S      S +G N  L  ++                  
Sbjct: 447 AEEFLGFFLDTLHEELISAQRRSALKLAQSASGPNGLLAKMSEEEKKLNGVSDDDLRRLG 506

Query: 344 ---------------------EEDE----------------WETVGPKNKSAVTRTQSFL 366
                                ++DE                W  VG K K+A TRT S  
Sbjct: 507 VRINKDGSSADAVGLGLEAALDDDEIVEREVMRPVSPSEQGWMEVGQKGKTAYTRTTSTS 566

Query: 367 PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG 426
            S ++ IFGG+L+SV+K  G K S T++P+  L LDI    V +IEDAL   + PE + G
Sbjct: 567 ESPITRIFGGKLRSVLKTPGAKDSVTLEPYQPLQLDIQPAHVQSIEDALLHLTEPEIIPG 626

Query: 427 YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTK 469
               S   A  V A K V +++L  +L+LHL RF Y   G  +
Sbjct: 627 --VWSPARAAQVDATKQVFVESLPPVLVLHLKRFIYDEIGGVQ 667


>gi|294654613|ref|XP_456675.2| DEHA2A07942p [Debaryomyces hansenii CBS767]
 gi|199429014|emb|CAG84631.2| DEHA2A07942p [Debaryomyces hansenii CBS767]
          Length = 876

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 148/323 (45%), Gaps = 73/323 (22%)

Query: 190 NEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDI----PKAGYPT 245
           N P+  VK   PRGL N+GN+C++NA LQ L+ C PF + L+ + ++ I     K+  P 
Sbjct: 434 NCPIFRVK---PRGLTNTGNICYMNAILQVLLYCEPFNKTLKLVESKSIGSLSQKSTTPL 490

Query: 246 LTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 305
           L   + F  +F  PS               +P SP  F   L   T +  + +    +QE
Sbjct: 491 LDIVIKFWKEFSQPSSM-------------KPISPDNFYMSL--ITHEKFSHLKWG-QQE 534

Query: 306 DAQEFLSFIMDQMHDEL-----------------------------------------LK 324
           DA+EFL + +D +H+E                                          +K
Sbjct: 535 DAEEFLGYFLDGLHEEFVGSIKGLNTPQTDLLIQQFQQQNEDIDQLKLNAFKLNIKNTMK 594

Query: 325 LQGESTSINGANTAL--VSLAEEDEWETVGPKNKS-AVTRTQSFLPSALSDIFGGQLKSV 381
           +  +S S N   T    VS  E + W  VG  NK  +  RT    PS ++ IFGGQ +SV
Sbjct: 595 IIKKSKSENQDTTHQEEVSDHESNGWSEVGSNNKKISAKRTVEIEPSPITTIFGGQFRSV 654

Query: 382 VKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT 439
           ++   NK S   T+ PF  + LDI   ++ T+EDA +  + PEN+  Y++SS      V 
Sbjct: 655 LQIPKNKESQSITLDPFQCIQLDISDSSITTVEDAFKQLNEPENI-PYKSSSNKE---VI 710

Query: 440 AKKSVKIQTLSKILILHLMRFSY 462
           AKK   I  L  ILI+HL RFSY
Sbjct: 711 AKKQTFIDQLPNILIIHLKRFSY 733


>gi|403413792|emb|CCM00492.1| predicted protein [Fibroporia radiculosa]
          Length = 877

 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 108/307 (35%), Positives = 160/307 (52%), Gaps = 26/307 (8%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL-RTRDIPKAG--------YPTLTAF 249
           + PRGL+N+GN+CF NA LQ L+ C PF +LL EL +    P  G         P + A 
Sbjct: 487 IQPRGLVNTGNMCFANAVLQILVYCPPFHRLLTELSKYLSGPVVGPQKEGTRATPLIDAT 546

Query: 250 VGFVSDFDTPSGGSSKKKNISVLD-IGRP--FSPS-MFEAVL--KNFTPDVPNSISGRPR 303
           + F+ +F   S    K K     D    P  F P+ +++A+   K F     + I G   
Sbjct: 547 IQFMKEFVPESSLDKKAKGKERDDDFYEPESFIPTYVYDAMKEKKRFA----SMIGGH-- 600

Query: 304 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDE-WETVGPKNKSAVTRT 362
           QEDA+EFL F +D + +ELL L     S          + ++D+ W  VG KN+S VTRT
Sbjct: 601 QEDAEEFLGFYLDTLEEELLSLSSSLLSKTPPKVDEEPVPQQDDGWYEVGKKNRSVVTRT 660

Query: 363 QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
                S+++ IFGG+ +S ++A   K S TV+ +  L LDI  E VH+I+DAL+  S P+
Sbjct: 661 TKSTESSITRIFGGKFRSTLRAPHQKDSITVEDWRSLRLDIQREQVHSIKDALQHISHPQ 720

Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQL 480
            ++  + +  G   VV A +   I+ L  +LILHL RF Y +      K+ K V +  +L
Sbjct: 721 PVQISQPTRPGV--VVEAAQQALIEALPSVLILHLKRFLYDTNVGDVVKIGKQVTYGPEL 778

Query: 481 VLGRDLL 487
            +  DL+
Sbjct: 779 DISPDLM 785


>gi|302510725|ref|XP_003017314.1| hypothetical protein ARB_04194 [Arthroderma benhamiae CBS 112371]
 gi|291180885|gb|EFE36669.1| hypothetical protein ARB_04194 [Arthroderma benhamiae CBS 112371]
          Length = 837

 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 155/307 (50%), Gaps = 42/307 (13%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 258
           L PRGL+N+GN+C++N+  +               R     K+  P + A + F+ +F  
Sbjct: 372 LEPRGLVNTGNMCYMNSIGR---------------RAAHSFKSDSPLVDAMIMFLREFRV 416

Query: 259 PSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
               SS      + K   + + G  F P     V+++           R  ++DAQEFL 
Sbjct: 417 IDAASSVEKLRLRLKQNELEEYGESFIPEYVYQVIRHLP-------RFRDMRQDAQEFLG 469

Query: 313 FIMDQMHDELL-----KLQGESTSINGANTALVSLAEE---DEWETVGPKNKSAVTRT-- 362
           F+++++HDE L      +  +S     ++    S+A++   D W  VG K K++VTR+  
Sbjct: 470 FLLEELHDECLLATKNAMADKSDVSTSSDVDAHSIADDSTGDGWLEVGHKQKASVTRSSG 529

Query: 363 QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
            S   S ++ IF G+++S  +  GNK S T++P+  L LDI S  V+ I DAL+  + PE
Sbjct: 530 DSSGESPITRIFSGKIRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTKPE 589

Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQL 480
            + G   SS G    V A K V I+ L  +LILHL RF Y   + G+ K+ K + +PL+L
Sbjct: 590 TMHGDFQSSRGPK--VNATKQVFIENLPPVLILHLKRFQYDNVTNGTQKIWKKIGYPLEL 647

Query: 481 VLGRDLL 487
            + +++ 
Sbjct: 648 EIPKEVF 654


>gi|302656314|ref|XP_003019911.1| hypothetical protein TRV_06012 [Trichophyton verrucosum HKI 0517]
 gi|291183687|gb|EFE39287.1| hypothetical protein TRV_06012 [Trichophyton verrucosum HKI 0517]
          Length = 837

 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 155/307 (50%), Gaps = 42/307 (13%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 258
           L PRGL+N+GN+C++N+  +               R     K+  P + A + F+ +F  
Sbjct: 372 LEPRGLVNTGNMCYMNSIGR---------------RAAHSFKSDSPLVDAMIMFLREFRV 416

Query: 259 PSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
               SS      + K   + + G  F P     V+++           R  ++DAQEFL 
Sbjct: 417 IDAASSVEKLRLRLKQNELEEYGESFIPEYVYQVIRHLP-------RFRDMRQDAQEFLG 469

Query: 313 FIMDQMHDELL-----KLQGESTSINGANTALVSLAEE---DEWETVGPKNKSAVTRT-- 362
           F+++++HDE L      +  +S     ++    S+A++   D W  VG K K++VTR+  
Sbjct: 470 FLLEELHDECLLATKNAMADKSDVSTSSDVDAHSIADDSTGDGWLEVGHKQKASVTRSSG 529

Query: 363 QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
            S   S ++ IF G+++S  +  GNK S T++P+  L LDI S  V+ I DAL+  + PE
Sbjct: 530 DSSGESPITRIFSGKIRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTKPE 589

Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQL 480
            + G   SS G    V A K V I+ L  +LILHL RF Y   + G+ K+ K + +PL+L
Sbjct: 590 TMHGDFQSSRGPK--VNATKQVFIENLPPVLILHLKRFQYDNVTNGTQKIWKKIGYPLEL 647

Query: 481 VLGRDLL 487
            + +++ 
Sbjct: 648 EIPKEVF 654


>gi|71019387|ref|XP_759924.1| hypothetical protein UM03777.1 [Ustilago maydis 521]
 gi|46099579|gb|EAK84812.1| hypothetical protein UM03777.1 [Ustilago maydis 521]
          Length = 918

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 159/359 (44%), Gaps = 81/359 (22%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG--YPTLTAFVGFVSDFDT 258
           PRGL+N GN CF NA LQ L+ C+PF  L   +  +     G   P + A + F+ +F  
Sbjct: 385 PRGLVNKGNFCFANAILQTLVYCAPFYNLFNLVANQISADFGNATPLMEAVIQFLREF-L 443

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSIS--------GRPRQEDAQE 309
           P   S+       LD   P       A  + F P+ V +++          R  QEDA+E
Sbjct: 444 PVDSSTS------LDARHPGQDGFIAAASEPFVPEFVYDAMRLNKRFDQMRRGHQEDAEE 497

Query: 310 FLSFIMDQMHDEL--------LKLQGESTSING--------------------------- 334
           FL F +D +H+EL        LKL   +++ NG                           
Sbjct: 498 FLGFFLDTLHEELISAQRRSALKLAQSASAPNGLLSKMSDDEKKLNGVSDDDLKRLGVRV 557

Query: 335 ----ANTALVSLA-----EEDE----------------WETVGPKNKSAVTRTQSFLPSA 369
               A+   V L      +ED+                W  VG K K+A TRT S   S 
Sbjct: 558 GKDAASADAVGLGLDAAFDEDDIVEREVMRPVSPSEQGWMEVGQKGKTAYTRTTSTSESP 617

Query: 370 LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT 429
           ++ IFGG+L+SV+K  G K S T++P+  L LDI    V +IEDAL   + PE + G  +
Sbjct: 618 ITRIFGGKLRSVLKTPGAKDSVTLEPYQPLQLDIQPAHVQSIEDALLHLTEPETIPGVWS 677

Query: 430 SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQLVLGRDLL 487
            S   +  V A K V I++L  +L+LHL RF Y   G   K  K + +   L +  D+L
Sbjct: 678 PS--RSAQVDATKQVFIESLPPVLVLHLKRFIYDEIGGVQKSQKPLSYGSTLEIAPDVL 734


>gi|254567223|ref|XP_002490722.1| Ubiquitin-specific protease that interacts with Bre5p [Komagataella
           pastoris GS115]
 gi|238030518|emb|CAY68442.1| Ubiquitin-specific protease that interacts with Bre5p [Komagataella
           pastoris GS115]
 gi|328351106|emb|CCA37506.1| ubiquitin carboxyl-terminal hydrolase 10 [Komagataella pastoris CBS
           7435]
          Length = 591

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 146/308 (47%), Gaps = 49/308 (15%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK----AGYPTLTAFVGFVS 254
           LLP GLIN GN+C++N+ LQ  + C P  ++L+ +R + I      +  P L A    + 
Sbjct: 163 LLPHGLINRGNICYMNSVLQLFIFCKPLFRVLRCIREKTIAHVSGTSDTPILDALTLLLE 222

Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
            F       S     SV D G P S   F   + +  P   +   G+  QEDA+EF+ ++
Sbjct: 223 RFQHKESHESA----SVDDFGEPLSQESFYTSIISL-PKFSHLRWGQ--QEDAEEFMGYV 275

Query: 315 MDQMHDELLKLQGEST---------SINGANTA-LVSLA--------------------- 343
           +D++H+E +    + T         S+N   +   +S A                     
Sbjct: 276 LDELHEEFISQMTKLTDTEKSQLLASVNNVESKKQISEALNLIQKKPGSSPKSKYDTEDK 335

Query: 344 -EEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV--VKAQGNKASATVQPFLLLH 400
            ++D W  VG  NK +  RT    PS +++IFGGQ +SV  V  Q N  S T+ PFL + 
Sbjct: 336 HDDDGWCEVGSNNKLSAKRTVEVKPSPITEIFGGQFRSVLNVPRQKNGRSITLDPFLHVQ 395

Query: 401 LDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRF 460
           LDI    V ++EDA    S  E +  Y++S   N  +V A K   I  L ++LI+HL RF
Sbjct: 396 LDISEPNVSSVEDAFTYLSQIEVIP-YKSS---NGNLVQATKQNMIDKLPEVLIIHLKRF 451

Query: 461 SYGSQGST 468
           SY  Q S+
Sbjct: 452 SYVRQESS 459


>gi|255727604|ref|XP_002548728.1| hypothetical protein CTRG_03025 [Candida tropicalis MYA-3404]
 gi|240134652|gb|EER34207.1| hypothetical protein CTRG_03025 [Candida tropicalis MYA-3404]
          Length = 534

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 159/338 (47%), Gaps = 64/338 (18%)

Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGY---PTLTAFVGFVS 254
           D+ PRGL NSGN+C++N+ LQ L+ C PF +LL+ + T+ I   G    P L A + F +
Sbjct: 159 DVKPRGLTNSGNICYMNSILQILLYCEPFNRLLKLIETKSIGSLGVSPTPLLDATITFFN 218

Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
            F   S                P SP  F + L   T     S     +QEDA+EFL + 
Sbjct: 219 QFQEDSKA--------------PVSPEDFYSSL---TKQDKFSHLKWGQQEDAEEFLGYY 261

Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEED---------------------------- 346
           +D ++DE+L  + +S S +  +  + + ++E                             
Sbjct: 262 IDGLNDEMLN-EIKSVSTSQVDKLIQTYSQEHDSESSAKFKYNIKSTIRRIKNEEEEEDG 320

Query: 347 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV----KAQGNKASATVQPFLLLHLD 402
           EW  V  K  S  T+ +   P+ L+ IFGGQ KSVV    ++   + S T+ PF  + LD
Sbjct: 321 EWSQVNNKKNSTTTKIE-VDPTPLNMIFGGQFKSVVTIPKQSSSFQRSITLDPFQHVQLD 379

Query: 403 IYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 462
           I   AV TIEDA +  +  EN+     S T N   +  KK   I+ L  +LI+HL RFSY
Sbjct: 380 I--SAVDTIEDAFKHLNELENI-----SYTNNNKEIQVKKQTFIEKLPNVLIIHLKRFSY 432

Query: 463 GSQ---GSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQF 497
                 G  KL K + +   L++ +++L T  +  +++
Sbjct: 433 LKDQEIGVEKLRKKIDYSHDLIIPKEVLATEPSTPIKY 470


>gi|358388036|gb|EHK25630.1| hypothetical protein TRIVIDRAFT_113185, partial [Trichoderma virens
           Gv29-8]
          Length = 877

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 155/307 (50%), Gaps = 41/307 (13%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 258
           L PRGLIN+GN+C++N+ +    + S F             K+  P + A + F+ +++ 
Sbjct: 445 LEPRGLINTGNMCYMNSVIGKKAAHS-F-------------KSETPLIDALIMFMREYNV 490

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISG--------RPRQEDAQE 309
                  K + SV  + R       E   + FTP+ V ++I          R  Q+DA+E
Sbjct: 491 ------LKSSASVDQLNRALKSEDLERYGEPFTPEFVYDAIRQLSRFASMRRGHQQDAEE 544

Query: 310 FLSFIMDQMHDEL------LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ 363
           FL F++  + DE       L +  E    + A+T   S+A  D+W  VG K ++AV+R  
Sbjct: 545 FLGFLLQSLDDECTHVMKDLPVGHEEVPSSDASTG-GSVAASDDWLEVGRKQRAAVSRLS 603

Query: 364 SFLPSA-LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
               S  ++ IFGG L+S  +  G K S T + +  L LDI S  V  + DALR  + PE
Sbjct: 604 GHNTSTPITKIFGGLLRSEFRVPGLKDSITTERYQPLQLDIGSPDVRNVVDALRGLTRPE 663

Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQL 480
            L+G   S  G    VTA K V I+TL  +LILHL RF + ++  G+ K+ K + +PL+L
Sbjct: 664 RLQGDFNSPRGKD--VTATKQVFIETLPPVLILHLKRFQFDAEGHGTVKIWKKIGYPLEL 721

Query: 481 VLGRDLL 487
            + R+ L
Sbjct: 722 EIPREAL 728


>gi|357627999|gb|EHJ77487.1| hypothetical protein KGM_16487 [Danaus plexippus]
          Length = 1123

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 163/321 (50%), Gaps = 44/321 (13%)

Query: 190  NEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLT 247
            N PV     L PRGL N  N C++NA LQAL++C PF  +L+ L  +TR   K+  P + 
Sbjct: 738  NRPV----SLTPRGLTNHSNYCYVNAILQALIACPPFYNMLKALPYQTRRG-KSSTPVID 792

Query: 248  AFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFE-------AVLKNFTPDVPNSISG 300
            + V     F  P   ++++        G P  P+M          VL+   P  P S  G
Sbjct: 793  SMVELCYAFG-PLPSANRRGRGESGASGAPAVPAMSPLDGSAGLRVLRALRP-FPGSQEG 850

Query: 301  RPRQEDAQEFLSFIMDQMHDELLKL-----QGESTSINGANTALVSLAE-------EDEW 348
              RQEDA+EFL  +++ ++DE+L+L       E   +NG    +V+  +       +DEW
Sbjct: 851  --RQEDAEEFLGCLLNSLNDEMLELIKLVEPEEPKDLNGKPNGIVAQEQPPDEDNDDDEW 908

Query: 349  ETVGPKNKSAVTRTQSFLPSALSDIFGGQLK-SVVKAQGNKASATVQPFLLLHLDIYSEA 407
            + +GP+N+ AV R  +   + ++DIF G+ +  + +A  +  +  VQPF  L LDI  E 
Sbjct: 909  KVMGPRNRGAVERRWAARRTPVADIFRGRTRLRLHRAPNHDVTDAVQPFFTLQLDI--ER 966

Query: 408  VHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS 467
              T++DAL L +  + LE          GV  A + + ++ L  +L+LHL  F   S+G 
Sbjct: 967  STTVKDALELLAGKDTLE----------GVSDAWQQLSLEQLPVVLLLHLKCFQLDSEGH 1016

Query: 468  T-KLHKSVRFPLQLVLGRDLL 487
            T K+ K++ FP+ L +   ++
Sbjct: 1017 TAKIVKNIDFPIDLKIDPKII 1037


>gi|164657422|ref|XP_001729837.1| hypothetical protein MGL_2823 [Malassezia globosa CBS 7966]
 gi|159103731|gb|EDP42623.1| hypothetical protein MGL_2823 [Malassezia globosa CBS 7966]
          Length = 540

 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 153/352 (43%), Gaps = 86/352 (24%)

Query: 200 LPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK---AGYPTLTAFVGFVSDF 256
           +P GL+N GN CF +A LQ L+ C P    L +LR   +P+      P L A   F S+ 
Sbjct: 132 VPVGLVNQGNSCFASAVLQMLVFCRPLYMFLTQLRMM-VPQDLSNSTPLLEAIFRFYSEI 190

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPR------------Q 304
                                 S  ++  V K+  P +P+ I    R            Q
Sbjct: 191 PV-------------------VSKQLYGLVEKSVDPILPDYIYDAMRLHKRFDLFQLGHQ 231

Query: 305 EDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLA--------------------- 343
           EDA+EFLS I+  +H+E++ +   +     ++ +L   A                     
Sbjct: 232 EDAEEFLSLILSTLHEEVVLVFARAMQRKKSSASLQQRAPKKSVAMGDPYAAYPPPMESD 291

Query: 344 -------------------EEDEWETVGPKNKSAVTRT--QSFLPSALSDIFGGQLKSVV 382
                              E+DEW  VG K ++++TRT   +   S ++ +F G+L+S +
Sbjct: 292 NSSDEEDILAMEVQRPPSPEQDEWLEVGQKGRTSLTRTSGNTDTHSPVTRMFDGKLRSTL 351

Query: 383 KAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKK 442
              G K S  V+P+  L LDI S  VHTIEDALR  + PE + G    S      V A K
Sbjct: 352 SCPGAKTSVMVEPYRSLPLDIQSSHVHTIEDALRHITEPELISG--VWSPQRNAYVDATK 409

Query: 443 SVKIQTLSKILILHLMRFS----YGSQGSTKLHKSVRFPLQLVLGRDLLVTP 490
            V+I+ L  +L+LHL RF     YG Q ST   K + F + L +  D+L TP
Sbjct: 410 QVRIEALPPVLVLHLKRFVFDEFYGVQKST---KPIHFGMSLEISPDILSTP 458


>gi|238489993|ref|XP_002376234.1| ubiquitin C-terminal hydrolase, putative [Aspergillus flavus
           NRRL3357]
 gi|220698622|gb|EED54962.1| ubiquitin C-terminal hydrolase, putative [Aspergillus flavus
           NRRL3357]
          Length = 411

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/202 (41%), Positives = 118/202 (58%), Gaps = 21/202 (10%)

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQGE--STSINGANTALVSLAEE---------DEWE 349
           R  Q+DAQEFL F++++MH+E  +   +  ST  +GA     SL+EE         D W 
Sbjct: 52  RGHQQDAQEFLGFLLEEMHEECARAAKDAPSTKTDGA----ASLSEEPSAADDESGDGWL 107

Query: 350 TVGPKNKSAVTRTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEA 407
            VG K K AVTR+   +   S +  IFGGQ++S  K  GNK S T++P+  L LDI S  
Sbjct: 108 EVGHKQKPAVTRSSGHMSYESPIMRIFGGQIRSEFKVPGNKTSVTLEPYQPLQLDIGSPE 167

Query: 408 VHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--Q 465
           ++ I DAL+  + PE+++G   SS G    VTA K + I+ L  +LILHL RF Y S  +
Sbjct: 168 INNIVDALKGLTKPESIQGDFNSSRGPN--VTATKQIFIENLPPVLILHLKRFQYDSVTR 225

Query: 466 GSTKLHKSVRFPLQLVLGRDLL 487
           G+ K+ K V +PL L + R++L
Sbjct: 226 GTQKIWKKVGYPLDLEIPREVL 247


>gi|46137553|ref|XP_390468.1| hypothetical protein FG10292.1 [Gibberella zeae PH-1]
          Length = 927

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 155/303 (51%), Gaps = 37/303 (12%)

Query: 199 LLPRGLINSGNLCFLNA-TLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFD 257
           L PRGLIN+GN+C++N+ + +A+ S                 K+  P + A + F+ +F 
Sbjct: 501 LEPRGLINTGNMCYMNSISKRAVHSF----------------KSDTPLIDAMIMFMHEFK 544

Query: 258 TPSGGSSKK------KNISVLDIGRPFSPS-MFEAVLKNFTPDVPNSIS-GRPRQEDAQE 309
           T    +  +      KN  +   G PF+P  ++EA+ +     +P   S  R  Q+DA+E
Sbjct: 545 TIKSAAGVEPLRLALKNEELERYGEPFTPEFVYEAIRQ-----LPRFASMRRGHQQDAEE 599

Query: 310 FLSFIMDQMHDELLKLQGESTSINGAN--TALVSLAEEDEWETVGPKNKSAVTRTQSFLP 367
           FL F++  + DE   +    T     +  +A       D+W  VG K KSAV+R+     
Sbjct: 600 FLGFLLQSLDDECTTVLKNFTPDEAEHQLSAGSDAGGADDWLEVGRKQKSAVSRSSGSNS 659

Query: 368 SALSD-IFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG 426
           S+    IFGG L+S  +  G K S T +P+  L LDI S  V  + DALR  + PE L+G
Sbjct: 660 SSPISRIFGGLLRSEFRVPGLKDSITTEPYQPLQLDIGSSDVRNVVDALRGLTRPERLQG 719

Query: 427 YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGR 484
              S  G    VTA K V I++L  +LILHL RF + ++  G+ K+ K + +PL+L + R
Sbjct: 720 DFNSPRGKE--VTATKQVFIESLPPVLILHLKRFQFDAEGNGTVKIWKKIGYPLELEIPR 777

Query: 485 DLL 487
           + L
Sbjct: 778 EAL 780


>gi|449018518|dbj|BAM81920.1| similar to ubiquitin carboxyl-terminal hydrolase 10
           [Cyanidioschyzon merolae strain 10D]
          Length = 633

 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 107/311 (34%), Positives = 151/311 (48%), Gaps = 43/311 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQEL-----RTRDIPKAGYPTLTAFVGFVSDFD 257
           G +N+GN C+LNA LQAL++   F      L       RD+ +     L A  G++   D
Sbjct: 231 GFVNTGNSCYLNAVLQALLAIDEFRLTWTALGALLPTQRDLLEKCNCHLVA--GWLRLID 288

Query: 258 TPSGGSSKKKNISVLDIGR------PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 311
                  + +    L  GR         P+ F      +  +   S  G   QEDAQE L
Sbjct: 289 EWQALCQQTR----LQRGRFGAAAPMLRPTYF------WENERLASTVGSGHQEDAQELL 338

Query: 312 SFIMDQMHDELLKLQ---GESTSINGANTALV-SLAEED-----EWETVGPKNKSAVTRT 362
             ++D +H ELL+L+   GE + +     A   SL + D     EWETV  + +SA+ RT
Sbjct: 339 MIMLDGLHSELLELRSLLGEKSKLASLERAASPSLTDSDATSDTEWETVDRRGRSAIVRT 398

Query: 363 QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
                + ++ IFGG L+S V+  G K SA  +PFL+L LDI  + + T++DA R F  PE
Sbjct: 399 HQVRKTFITSIFGGALRSEVRKAGAKRSAVREPFLMLSLDIEDQRIRTLDDAFRYFMEPE 458

Query: 423 NLEG-------YRTSSTGNAGVVTAKKSVKIQT-LSKILILHLMRFSYGSQGS---TKLH 471
            LE         RT +   A +   +K V + T L + LI+HL RFS  S G+    KLH
Sbjct: 459 FLEAPDERDSSARTRTRVAANLDPLRKHVTLDTPLPQALIIHLKRFSVASDGTGQGKKLH 518

Query: 472 KSVRFPLQLVL 482
           K + FP Q VL
Sbjct: 519 KELSFPPQFVL 529


>gi|392595347|gb|EIW84670.1| cysteine proteinase [Coniophora puteana RWD-64-598 SS2]
          Length = 917

 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 152/325 (46%), Gaps = 38/325 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQEL-RTRDIP--------------KAGYPTLT 247
           GL+N+GN+CF N  LQ L+ C PF +L  EL R  D+               +   P + 
Sbjct: 511 GLVNTGNMCFANVVLQVLVYCPPFWRLFTELGRLVDVDGEKDKHGEKGKQKRETKTPMID 570

Query: 248 AFVGFVSDF--DTPSGGSSK-------KKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSI 298
           A + F+ +F    P  G  K       ++     +    F P++    LK       N  
Sbjct: 571 ASIRFLREFMPKKPVEGKGKGVDREYYRQEEDEQEFYSSFVPTVVYDALKEKK-QFDNMR 629

Query: 299 SGRPRQEDAQEFLSFIMDQMHDEL------LKLQGESTSINGANTALVSLAEEDEWETVG 352
            G   QEDA+EFL F +D + +E       L       + NG   +    +++D W  VG
Sbjct: 630 GGH--QEDAEEFLGFYLDTLEEEFNIMSSSLAPPAPRPAQNGHVPSGNEASQDDGWLEVG 687

Query: 353 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 412
            K +  VTRT     S ++ IFGG+ +S ++    K SA V+ +  L LDI  E + TI+
Sbjct: 688 KKQRPTVTRTVKSTESPITRIFGGKFRSTLRVPHQKDSAVVEDWRSLRLDIQREQIATIK 747

Query: 413 DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKL 470
           DAL   S P +++   TS T     + A + V ++ L  +LILHL RF Y +   G  K+
Sbjct: 748 DALACISHPSSVQ--VTSVTKPGVTLDATQQVHVEALPPVLILHLKRFLYDANAGGVAKV 805

Query: 471 HKSVRFPLQLVLGRDLLVTPSAEVL 495
            K V F  +L +G +L+  P  +VL
Sbjct: 806 CKHVSFGPELEIGSELMA-PGKKVL 829


>gi|358390185|gb|EHK39591.1| hypothetical protein TRIATDRAFT_82240 [Trichoderma atroviride IMI
           206040]
          Length = 862

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 158/306 (51%), Gaps = 43/306 (14%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 258
           L PRGLIN+GN+C++N+  +A  S                 K+  P + A + F+ ++  
Sbjct: 439 LEPRGLINTGNMCYMNS--RAAHSF----------------KSETPMIDALIMFMREYRV 480

Query: 259 PSGGSSK---KKNISVLDI---GRPFSPS-MFEAV--LKNFTPDVPNSISGRPRQEDAQE 309
               +S     +N+   D+   G PF+P  +++A+  L  F     +S+  R  Q+DA+E
Sbjct: 481 LKSSASADQLNRNLKSEDLERYGEPFTPEFVYDAIRQLSRF-----DSMR-RGHQQDAEE 534

Query: 310 FLSFIMDQMHDELLKLQGE----STSINGANTALV-SLAEEDEWETVGPKNKSAVTRTQS 364
           FL F++  + DE   +  +       +  +NT+   S+A  D+W  VG K ++AV+R   
Sbjct: 535 FLGFLLQSLDDECTHVMKDLSIVPEEVPSSNTSTGGSVAASDDWLEVGRKQRAAVSRLSG 594

Query: 365 FLPSA-LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 423
              S  ++ IFGG L+S  +  G K S T + +  L LDI S  V  + DALR  + PE 
Sbjct: 595 HNTSTPITKIFGGLLRSEFRVPGLKDSITTERYQPLQLDIQSPDVRNVVDALRGLTRPER 654

Query: 424 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLV 481
           ++G   S  G    V A K V I++L  +LILHL RF + ++  G+ K+ K + +PL+L 
Sbjct: 655 IQGDFNSPRGKD--VVATKQVFIESLPPVLILHLKRFQFDAEGHGTVKIWKKIGYPLELE 712

Query: 482 LGRDLL 487
           + R+ L
Sbjct: 713 IPREAL 718


>gi|347441714|emb|CCD34635.1| similar to U1biquitin-specific peptidase [Botryotinia fuckeliana]
          Length = 617

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 133/255 (52%), Gaps = 33/255 (12%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L+ C+PF   L ++  +     K+  P + A + F+ +F
Sbjct: 357 LEPRGLVNTGNMCYMNSVLQVLVFCTPFYDFLDQVSKKAAHSFKSQTPLIDAMIMFMREF 416

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR-PR--------QEDA 307
                  S ++    L  G        E    +FTPD    +  R PR        Q+DA
Sbjct: 417 SVIDSAKSVEQLKMRLKDGE------LEQYGDSFTPDFVYDVMRRLPRFVTMQRGHQQDA 470

Query: 308 QEFLSFIMDQMHDELLK-LQGESTSINGANTALVSLAE-------------EDEWETVGP 353
           +EFL F+++ +HDE +  ++   +S N A+T  +++               +D W+ VGP
Sbjct: 471 EEFLGFLLEGLHDECVHVMKSSESSKNSADTTPMNVPSSPISDTASRRGSVDDVWQQVGP 530

Query: 354 KNKSAVTRTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTI 411
           K K+A+TR+   +   S ++ IFGG L+S ++  G K S T++P+  L LDI S  +H I
Sbjct: 531 KQKAAITRSSGTILTGSPVTKIFGGSLRSELRVPGLKDSITLEPYQPLQLDIGSPDIHNI 590

Query: 412 EDALRLFSAPENLEG 426
            DALR  +  E L G
Sbjct: 591 VDALRGLTHSEVLHG 605


>gi|50552594|ref|XP_503707.1| YALI0E08844p [Yarrowia lipolytica]
 gi|49649576|emb|CAG79296.1| YALI0E08844p [Yarrowia lipolytica CLIB122]
          Length = 749

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 145/275 (52%), Gaps = 34/275 (12%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA---GYPTLTAFVGFVSDF- 256
           PRG++N+GN+CF+N+ LQ L+ C PF +L+  +R + +P++     P   A V F+ D+ 
Sbjct: 382 PRGIVNNGNVCFMNSILQILVHCLPFSRLIDLIREK-VPRSLDGDSPLTEAVVDFLDDYK 440

Query: 257 ----DTPSGGS----SKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPN-SISGRPRQEDA 307
               +  +GGS    SK  +I++         S +++++      VP  S   R +QEDA
Sbjct: 441 RGAVNGVNGGSTPATSKLPDITI--------DSFYKSIVS-----VPRFSHFQRGKQEDA 487

Query: 308 QEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP 367
           +EFL +++D +H+E + + G               AE   W  VG K K++ TR+  F  
Sbjct: 488 EEFLGYLLDGLHEEFVAVIGAREEAAAKEEGATGSAE---WTQVGAK-KNSTTRSPQFPW 543

Query: 368 SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY 427
           S +SDIFGG+ +S +       S  ++PF ++HLD+ +  + ++E   +  SA E +E  
Sbjct: 544 SPVSDIFGGKFESNLDVPRQSVSKVLEPFHVIHLDVENPNITSVESGFKALSAKEQVE-- 601

Query: 428 RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 462
            T   G   +  A K   ++ L +IL++ L RF+Y
Sbjct: 602 -TFGEGGRPITGASKQTLLEELPRILVVQLKRFTY 635


>gi|367008410|ref|XP_003678705.1| hypothetical protein TDEL_0A01620 [Torulaspora delbrueckii]
 gi|359746362|emb|CCE89494.1| hypothetical protein TDEL_0A01620 [Torulaspora delbrueckii]
          Length = 795

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 152/332 (45%), Gaps = 71/332 (21%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDI-PKAGYPTLT---AFV 250
           S++++ PRG+IN  N+CF+++ +Q L+ C PF+ +L  + TR++  +AG P  T   A V
Sbjct: 351 SIREVAPRGIINRANICFMSSVMQVLLYCKPFINILNVVGTRNLNARAGTPECTLLDACV 410

Query: 251 GFVSDFDTPSGGSSKKKNI---------SVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR 301
            F   FD     S +K  +         SV  I     P  F + L    P   +   G 
Sbjct: 411 NFYKQFDKERLESERKPQLKSKQQQTVNSVASIADAIKPDDFYSALSKI-PKFKDLKWGH 469

Query: 302 PRQEDAQEFLSFIMDQMHDELL---------KLQGESTSINGANTALV------------ 340
             QEDA+EFL+ ++DQ+H+E +         ++     SIN     ++            
Sbjct: 470 --QEDAEEFLTHLLDQLHEEFISFIDCLTDNEISNLLQSINDEELKIILHQKSTKIQECR 527

Query: 341 -----------------SLAEEDE-----WETV------GPKNKSAVTRTQSFLPSALSD 372
                            S+ ++D      W  V      G KNK+A  RT    PS +S 
Sbjct: 528 IYKNPSASLKELIIKYGSINDDDNEDGNGWHEVSGTSKKGKKNKTAAKRTVEVEPSPMSC 587

Query: 373 IFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTS 430
           +FGGQ +SV+    NK S   T+ PF  + LDI   +V+ +E A + FS  E L     S
Sbjct: 588 LFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISERSVNDLETAFKKFSEYELLP--FKS 645

Query: 431 STGNAGVVTAKKSVKIQTLSKILILHLMRFSY 462
           S+GN   V AKK   I  L ++L++ L RF +
Sbjct: 646 SSGND--VEAKKQTFIDKLPQVLLIQLKRFQF 675


>gi|295659066|ref|XP_002790092.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226281994|gb|EEH37560.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 914

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/202 (38%), Positives = 118/202 (58%), Gaps = 14/202 (6%)

Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSI-----NGANTALVSLAEE---DEWE 349
           ++ R  Q+DAQEFL F+++++H+E  +   ++TS         +T   S A E   + W 
Sbjct: 506 MNSRGHQQDAQEFLGFLLEELHEECTQAVKQATSTGPDIPTHVDTDSASAASEPSVEGWL 565

Query: 350 TVGPKNKSAVTRTQSFLPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEA 407
            VG K K ++TR+   + S   ++ IFGG+L+S  +  GNK S T++P+  L LDI S  
Sbjct: 566 EVGHKQKPSITRSSGHVASESPITKIFGGKLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQ 625

Query: 408 VHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--Q 465
           V  I DAL+  + PE ++G   SS G    VTA K V I+TL  +LILHL RF Y S  +
Sbjct: 626 VTNIIDALKGLTKPETMQGDFNSSRGPK--VTATKQVFIETLPPVLILHLKRFQYDSVTK 683

Query: 466 GSTKLHKSVRFPLQLVLGRDLL 487
           G+ K+ K V +PL+L + R++ 
Sbjct: 684 GTQKIWKRVGYPLELEVPREVF 705


>gi|302830983|ref|XP_002947057.1| hypothetical protein VOLCADRAFT_120420 [Volvox carteri f.
            nagariensis]
 gi|300267464|gb|EFJ51647.1| hypothetical protein VOLCADRAFT_120420 [Volvox carteri f.
            nagariensis]
          Length = 2032

 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/249 (37%), Positives = 133/249 (53%), Gaps = 38/249 (15%)

Query: 259  PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRP-------------RQE 305
            PS G S      VL  G+P  PSM   +   F P +  SI+ +               Q+
Sbjct: 1700 PSSGPSASGKEVVLG-GQPLVPSMLSGIAAAFNPRI--SIAEKQTMAKVLSKSVVEQEQQ 1756

Query: 306  DAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLA----EEDEWETVGPKNKSAVTR 361
            DAQEF  F+++++H+E+L L+           A  S A    + +EW  VG KNK+ VTR
Sbjct: 1757 DAQEFFQFLVNRVHEEVLGLRKAHGLAAAPAAASASAAGGSDDGEEWSQVGRKNKATVTR 1816

Query: 362  TQSFLP-------SALSDIFGGQLKSVVKAQ----GNKASATVQPFLLLHLDIYSEAVHT 410
             Q   P       S ++ IF G +KS ++ Q      K SAT++ F +LHLDI +E V+T
Sbjct: 1817 -QVGTPADDASSRSPVTAIFSGLVKSTIRFQQPHANYKPSATIEVFNMLHLDIAAEGVNT 1875

Query: 411  IEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--- 467
            +EDALR  S PEN+E Y+    G + ++ AKK V++  L ++L+LHL RF+Y + G    
Sbjct: 1876 LEDALRHHSVPENIE-YKPE--GASEMLPAKKDVRLYRLPEVLVLHLKRFTYTAAGGGHY 1932

Query: 468  TKLHKSVRF 476
            TKL KSV F
Sbjct: 1933 TKLQKSVAF 1941



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 29/35 (82%)

Query: 199  LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL 233
            +LPRGL N+GN CF+NAT+QAL++C+PF  +L  L
Sbjct: 1576 ILPRGLKNTGNTCFINATMQALLACAPFASVLSRL 1610


>gi|226290446|gb|EEH45930.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
          Length = 897

 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 78/199 (39%), Positives = 116/199 (58%), Gaps = 14/199 (7%)

Query: 301 RPRQEDAQEFLSFIMDQMHDELLKLQGESTSI-----NGANTALVSLAEE---DEWETVG 352
           R  Q+DAQEFL F+++++H+E  +   ++TS         +T   S A E   + W  VG
Sbjct: 541 RGHQQDAQEFLGFLLEELHEECTQAVKQATSTGPDIPTPVDTDSASAASEPSVEGWLEVG 600

Query: 353 PKNKSAVTRTQSFLPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHT 410
            K K ++TR+   + S   ++ IFGG+L+S  +  GNK S T++P+  L LDI S  V  
Sbjct: 601 HKQKPSITRSSGHVASESPITKIFGGKLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVTN 660

Query: 411 IEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGST 468
           I DAL+  + PE ++G   SS G    VTA K V I+TL  +LILHL RF Y S  +G+ 
Sbjct: 661 IIDALKGLTKPETMQGDFNSSRGPK--VTATKQVFIETLPPVLILHLKRFQYDSVTKGTQ 718

Query: 469 KLHKSVRFPLQLVLGRDLL 487
           K+ K V +PL+L + R++ 
Sbjct: 719 KIWKRVGYPLELEVPREVF 737


>gi|406607793|emb|CCH40898.1| Ubiquitin carboxyl-terminal hydrolase [Wickerhamomyces ciferrii]
          Length = 869

 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 162/360 (45%), Gaps = 79/360 (21%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK----AGYPTLTAFVGFVS 254
           ++PRGL+N+GN+CF+++ LQ L+ C PF ++L  +  R I      +  P + A + F  
Sbjct: 463 IIPRGLVNTGNICFMSSILQLLLYCQPFYKILNVISIRTIHSINGTSSTPLIDALIEFYK 522

Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR------PRQEDAQ 308
           +F+       KK        G    P  F   +         S++ R       +QEDA+
Sbjct: 523 NFNIKLDNPDKK-------FGDSLVPEEFYKKI---------SLNERFQHLKWGQQEDAE 566

Query: 309 EFLSFIMDQMHDELLK--------------------------------------LQGEST 330
           EF  +++D +H+E +                                        +  + 
Sbjct: 567 EFFGYLLDGLHEEFISSVKSIKPTETKTLIDSITTEDVRQSIRQSLKQFSDDDDFKSSNE 626

Query: 331 SINGANTALVSLAEEDEWETVG-PKNKSAVTRTQSFLPSALSDIFGGQLKSV--VKAQGN 387
           S  G N+   +L  +D W  VG  KNK +  RT    PS +  +FGGQ +S+  +  Q  
Sbjct: 627 SNGGINSTSNNLTSDDGWHEVGSTKNKISAKRTVEVKPSPIRQLFGGQFRSILDIPKQRE 686

Query: 388 KASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQ 447
             S T+ PF  + LDI  ++++T+EDA +  S   N+E     S   + V+ AKK   I 
Sbjct: 687 SQSITLDPFQQIQLDISDDSINTLEDAFKNIS---NIEEIPYKSNDGSEVI-AKKQTFID 742

Query: 448 TLSKILILHLMRFSYGSQGSTKLH-------KSVRFPLQLVLGRDLLVTPSAEVLQFLNV 500
            L ++L++HL RFS+ S+ + +L+       K + +  +L +  + +++PS      +N+
Sbjct: 743 KLPEVLVVHLKRFSFISKSNNQLYGHIEKIRKKISYKSELKIPEE-VISPSTRKFNSINL 801


>gi|307102558|gb|EFN50829.1| hypothetical protein CHLNCDRAFT_55534 [Chlorella variabilis]
          Length = 922

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 157/357 (43%), Gaps = 68/357 (19%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK----------AGYPTLTAFV 250
           PRGL N GNLCF+N+ LQAL+  S F QLL  LR +  P+          A       F 
Sbjct: 507 PRGLFNPGNLCFMNSILQALLGSSRFCQLLAALR-KAAPELDAAATPTLAALAELAAEFK 565

Query: 251 GFVSDFDTPSGGSSKK---------------KNISVLDIG-RPFSPSMFEAVLKNFTPDV 294
              +  +   GG++ +               K   +L +G RP  P M   V+ +F P  
Sbjct: 566 PVEAPRERQGGGAAAEDGQQQGVGAAAAGAAKAAGLLMLGDRPLMPGMLMEVVNSFRPHG 625

Query: 295 -------------------------PNSISGRP---------RQEDAQEFLSFIMDQMHD 320
                                    P S+   P          QEDA +FL +++D+MH 
Sbjct: 626 CGAGGGATSTCSIVLGPGKSNGSTGPMSLQASPCATIAAPRWEQEDAHDFLEYLVDRMHQ 685

Query: 321 ELLKLQG----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
           E  +L G     S +   A       AEEDEW T   +  +     ++   + +S +F G
Sbjct: 686 EWARLSGGGAALSATAASAAANAAKAAEEDEWLTRSGRRTTKRQPLKTDSETTVSGLFRG 745

Query: 377 QLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 436
              S V  QG+  S T QPF+ L L I  ++V +++DAL L +A E++ GY+   T  + 
Sbjct: 746 TTLSTVTCQGHPPSETPQPFVSLSLHILPDSVKSVDDALDLLTATESISGYKPQDT--SA 803

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 493
              A K V++Q L  +L+L LMRF   +    K+ K V FP +L + R  L + S E
Sbjct: 804 PTEATKVVRLQRLPPLLVLFLMRFDPANL-HQKISKPVAFPPRLKMNRTWLASDSGE 859


>gi|390597718|gb|EIN07117.1| cysteine proteinase [Punctularia strigosozonata HHB-11173 SS5]
          Length = 980

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 112/347 (32%), Positives = 156/347 (44%), Gaps = 74/347 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSP----FVQLLQELRTR---DIPKAG------------- 242
           GLIN+GN+CF NA LQ L+ C P    F +L + L T    D P  G             
Sbjct: 556 GLINTGNMCFANAVLQVLVYCPPFWRLFRELGKYLPTTVAFDGPVVGKEREKEKDEKKSP 615

Query: 243 YPTLTAFVGFVSDFDTPSG---GSSKKKNIS------------------------VLDIG 275
            P + A V F+S+F  P+    G  K K+                           +D  
Sbjct: 616 VPLVEATVQFLSEF-VPAEDKEGHGKDKDRGREGGKGKKSGKGREVSMDGEDEDWAMDS- 673

Query: 276 RPFSPSMFEAVL---KNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLK-LQGESTS 331
             F PS    V+   K F       ++G   QEDA+EF  F +D + +ELL  L   +  
Sbjct: 674 --FIPSTVYDVVRATKRF-----GGMTGG-HQEDAEEFFGFYLDTLEEELLSILHSIAPE 725

Query: 332 INGANTALV---------SLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           +N A +  V         S   ED W  VG KN+S VTRT     S ++ +FGG+ +S +
Sbjct: 726 LNAAASPAVPDEPRDVAGSSQHEDGWLEVGKKNRSVVTRTTKSTESPITRLFGGKFRSTL 785

Query: 383 KAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKK 442
           +A   K S  V+ +  L LDI  E VHTI DAL   S P+ ++    +  G   VV A +
Sbjct: 786 RAPHQKDSVIVEDWRELQLDISREQVHTIADALAHLSHPQPVQIALPTRPGY--VVDATQ 843

Query: 443 SVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLL 487
            V I  L  IL+LHL RF Y ++     K+ K V    +LV+  D++
Sbjct: 844 HVLIDALPPILVLHLKRFLYDTKVGDVVKIGKKVALEPELVIPADII 890


>gi|170038530|ref|XP_001847102.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167882245|gb|EDS45628.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 1984

 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 122/229 (53%), Gaps = 31/229 (13%)

Query: 199  LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA-----GYPTLTAFVGFV 253
            + PRGLIN  N C++NA LQAL++C PF  L++ +R+  +P A       P + A    V
Sbjct: 1389 IQPRGLINRSNYCYINAILQALVACPPFYHLMRAIRS--LPAARNSKHPKPFIDAMTALV 1446

Query: 254  SDFDT-P-----SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDA 307
            ++F T P     +   +KK     +    P  P +   +L     D+   + GR  QEDA
Sbjct: 1447 AEFSTLPLRSKVARDKTKKDETPDITTDTPLEPVVIHKILALLRSDI-FQVEGR--QEDA 1503

Query: 308  QEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDE---------WETV-GPK 354
            +EFL  ++++++DE+L   KL    + +NG++    S AEE           W+ + G +
Sbjct: 1504 EEFLGCVLNRLNDEMLELMKLSKNESEVNGSSGN--SSAEESGDGHGDDQDDWKVIRGNR 1561

Query: 355  NKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDI 403
            NK  +TRT  F  S +SDIFGG+L+S V  +G+  +  +QPF  L LDI
Sbjct: 1562 NKGTITRTTDFGRSPMSDIFGGKLRSRVHREGDHPTDNIQPFFTLQLDI 1610



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 410  TIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTK 469
            +++DAL L    + LEG   S T     + A + V ++ L  ++ILHL  F Y   G TK
Sbjct: 1758 SVKDALDLLVGKDQLEGMTCSKTKQE--IQAWQQVTLEELPIVMILHLKCFDYKMDGCTK 1815

Query: 470  LHKSVRFPLQLVLGRDLL 487
            + K++ FP++L +   L+
Sbjct: 1816 ILKTLEFPIELKIDSKLM 1833


>gi|343961587|dbj|BAK62383.1| ubiquitin carboxyl-terminal hydrolase 10 [Pan troglodytes]
          Length = 252

 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/158 (39%), Positives = 96/158 (60%), Gaps = 4/158 (2%)

Query: 331 SINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKAS 390
           S+N           EDEWE VGP+NK++VTR   F+ + ++ IFGG ++SVV  Q +K S
Sbjct: 17  SVNEEEQEEQGEGSEDEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKES 76

Query: 391 ATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLS 450
           AT+QPF  L LDI S+ + T++DAL    A E+++GY T +      V   + V ++ L 
Sbjct: 77  ATLQPFFTLQLDIQSDKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLP 133

Query: 451 KILILHLMRFSY-GSQGSTKLHKSVRFPLQLVLGRDLL 487
            +L+LHL RF Y  + G  KL K++ +P+ L + ++LL
Sbjct: 134 PVLVLHLKRFVYEKTGGCQKLIKNIEYPVDLEISKELL 171


>gi|330792183|ref|XP_003284169.1| hypothetical protein DICPUDRAFT_52731 [Dictyostelium purpureum]
 gi|325085866|gb|EGC39265.1| hypothetical protein DICPUDRAFT_52731 [Dictyostelium purpureum]
          Length = 442

 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 110/192 (57%), Gaps = 17/192 (8%)

Query: 304 QEDAQEFLSFIMDQMHDELLKLQGE-------------STSINGANTALVSLAEEDEWET 350
           Q+DAQEFL F++D +++E L L  +             S+S + +++   S    D+WE 
Sbjct: 180 QQDAQEFLVFLLDLINEEFLTLLKDIDIKDEEKSLLSPSSSSSSSSSKDSSELNSDDWEV 239

Query: 351 VGPKNKSAV-TRTQSFLP-SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAV 408
           VG   K+AV T +Q  LP + +S IF G L+S     G K S TV+PF  LHLDI  E +
Sbjct: 240 VGKNGKTAVFTNSQQELPKTPISQIFSGVLRSSFNRTGQKESITVEPFYCLHLDIRPEEI 299

Query: 409 HTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           +++EDAL+ F  PE +E Y  +       +TA KS   ++L +ILI+HL RF++ S  S 
Sbjct: 300 NSLEDALKFFMKPEIIEDY--TCPNKKTEITASKSWSFESLPRILIIHLKRFAFESDASR 357

Query: 469 KLHKSVRFPLQL 480
           KL K + FP QL
Sbjct: 358 KLDKKISFPTQL 369



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF 256
           PRGLIN+ N CF+N  LQ+L  C  F+++++ ++  D     YPTL +F  F +++
Sbjct: 18  PRGLINTSNTCFMNVILQSLTGCQLFLKVIKNIQDLDNLHI-YPTLNSFNQFYAEY 72


>gi|384248322|gb|EIE21806.1| cysteine proteinase [Coccomyxa subellipsoidea C-169]
          Length = 282

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/191 (42%), Positives = 115/191 (60%), Gaps = 16/191 (8%)

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLA--EEDEWETVGPKNKSAVT 360
           +QEDAQEFL F++D  H+ELL+L+    +  G N A  S A  +++EW   G   K    
Sbjct: 29  QQEDAQEFLGFLLDSAHEELLRLRLLHAASLG-NPAEGSEAGGDDEEWLMAGRSKKKKAG 87

Query: 361 RTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
            T     +  S +FGG L+S VKA G  ASAT++P  ++HLDI  +AV ++ DAL  F++
Sbjct: 88  GT-----TLASAVFGGALRSEVKAAGAPASATLEPCFVVHLDIQPDAVRSVSDALHAFTS 142

Query: 421 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
           PE + GY+     N+  VTA+K V++  L +IL+LHL RFSYG  G+ K+HK+V +    
Sbjct: 143 PETISGYKVRD--NSEGVTARKVVQLYALPRILVLHLKRFSYGLTGTGKIHKTVHY---- 196

Query: 481 VLGRDLLVTPS 491
             G  L V PS
Sbjct: 197 --GDRLRVQPS 205


>gi|68491385|ref|XP_710490.1| hypothetical protein CaO19.6319 [Candida albicans SC5314]
 gi|46431699|gb|EAK91232.1| hypothetical protein CaO19.6319 [Candida albicans SC5314]
          Length = 482

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 150/327 (45%), Gaps = 62/327 (18%)

Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG---YPTLTAFVGFVS 254
           D+ PRGL N+GN+C++N+ LQ L+ C PF +LL+ + T+ I   G    P L A + F +
Sbjct: 107 DIKPRGLTNTGNICYMNSILQILIHCEPFNRLLKLIETKSIGSLGPSSTPLLDATIIFFN 166

Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
            F     G+               SP  F A L         S     +QEDA+EFL + 
Sbjct: 167 QFQENVKGA--------------ISPESFYASLTKLDK---FSHLKWGQQEDAEEFLGYY 209

Query: 315 MDQMHDELLK-------------LQGESTSINGANTALVSL--------------AEEDE 347
           +D +++E L              +Q  +   +   TA                  A++ E
Sbjct: 210 LDGLNEEFLGAIKQLNTPQIDSLIQVYAQDHDAEATAKFKFNVKSTIKRIKNDAEADDGE 269

Query: 348 WETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV----KAQGNKASATVQPFLLLHLDI 403
           W  V  K  S  T+ +   P+ L+ IFGG+ KSVV    ++   + S T+ PF  + LD+
Sbjct: 270 WNQVNKKKNSTTTKIE-IDPTPLNMIFGGEFKSVVTIPKQSSSFQKSITLDPFQHVQLDV 328

Query: 404 YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG 463
            S    TIEDA++  +  E++     S T N   +  KK   I+ L  +LI+HL RFSY 
Sbjct: 329 SS--ADTIEDAIKHLNESESI-----SYTNNNKEIQVKKQTFIEKLPNVLIIHLKRFSYL 381

Query: 464 SQ---GSTKLHKSVRFPLQLVLGRDLL 487
                G  KL K V +   L++ ++++
Sbjct: 382 KDQEIGVEKLRKKVDYNHDLIIPKEVM 408


>gi|50290211|ref|XP_447537.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526847|emb|CAG60474.1| unnamed protein product [Candida glabrata]
          Length = 816

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 164/340 (48%), Gaps = 70/340 (20%)

Query: 188 AINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDI-PKAGYPT- 245
           A NE    +++++PRG+IN+ N+CF+++ LQ L+ C+PFV +L  + TR++  K+G  + 
Sbjct: 360 AKNEDKLPIREIIPRGIINNANICFMSSVLQVLLYCAPFVDILNVVSTRNMNAKSGSSSA 419

Query: 246 --LTAFVGFVSDFDTPSGGSSKKKNISVLDIG-RPFSPSMFEAVLKNFTPD-VPNSISGR 301
             L A +     FD  +    K+K       G +  SP  + ++ +   PD    S+S  
Sbjct: 420 KLLDACLTIYKKFDKANYEKEKEKESEKEKPGSKKSSPPAYASITEAVNPDEFYRSLSTI 479

Query: 302 PR--------QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEED------- 346
           P+        QEDA+EFL+ ++DQ+H+EL+    +S S N     L S+ +ED       
Sbjct: 480 PKFKDLRWGHQEDAEEFLTHLLDQLHEELISA-IDSLSENEILNLLQSIHDEDLKIYIIR 538

Query: 347 --------EW-ETVGPKNKSAVT---------------------------------RTQS 364
                   E+ + + P+ K  +                                  RT  
Sbjct: 539 NLSRYKDAEFIKNMSPQLKDQINKYGTISDDSEEGNGWHEVSGSSKKGKKTKTAAKRTVE 598

Query: 365 FLPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
           F+PS +S++FGGQ +SV+    NK S   T+ PF  + LDI    V ++E AL+ FS  E
Sbjct: 599 FIPSPISNLFGGQFRSVLDIPQNKESQSITLDPFQTIQLDISDPGVDSLEAALKKFSEYE 658

Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 462
            L     SS+GN   V AKK   I  L +IL++ L RFS+
Sbjct: 659 LLP--FKSSSGND--VEAKKQTFIDKLPQILLIQLKRFSF 694


>gi|241956180|ref|XP_002420810.1| ubiquitin carboxyl-terminal hydrolase, putative; ubiquitin
           thioesterase, putative [Candida dubliniensis CD36]
 gi|223644153|emb|CAX40960.1| ubiquitin carboxyl-terminal hydrolase, putative [Candida
           dubliniensis CD36]
          Length = 639

 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 150/329 (45%), Gaps = 65/329 (19%)

Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG---YPTLTAFVGFVS 254
           D+ PRGL N+GN+C++N+ LQ L+ C PF +LL+ + T+ I   G    P L A + F +
Sbjct: 263 DIKPRGLTNTGNICYMNSILQILIHCDPFSRLLKLIETKSIGSLGPSSTPLLDATIAFFN 322

Query: 255 DF-DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 313
            F DT  G  S            PF   +    L  F      S     +QEDA+EFL +
Sbjct: 323 QFQDTSKGAVS----------AEPFYTHL--TKLDKF------SHLKWGQQEDAEEFLGY 364

Query: 314 IMDQMHDELLK-------------LQGESTSINGANTALVSL------------AEED-- 346
            +D +++E L              +Q  +   +    A                 ++D  
Sbjct: 365 YLDALNEEFLAAIKQLNTPQVDSLIQAYAQDHDAEAVATFKFNVKSTIKRIKNDTDQDTD 424

Query: 347 -EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV----KAQGNKASATVQPFLLLHL 401
            EW  V  K  S+ T+ +   P+ L+ IFGG+ KSVV    ++   + S T+ PF  + L
Sbjct: 425 GEWSQVNKKKNSSTTKIE-IDPTPLNMIFGGEFKSVVTIPKQSSSFQKSITLDPFQHVQL 483

Query: 402 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 461
           DI S  V TIEDA +  +  E +     S T N   +  KK   I+    +LI+HL RFS
Sbjct: 484 DISS--VDTIEDAFKHLNESEII-----SYTNNNKEIQVKKQTFIEKFPNVLIIHLKRFS 536

Query: 462 YGSQ---GSTKLHKSVRFPLQLVLGRDLL 487
           Y      G  KL K V +   L++ ++++
Sbjct: 537 YLKDHEIGVEKLRKKVDYNHDLIIPKEVM 565


>gi|290986388|ref|XP_002675906.1| ubiquitin carboxyl-terminal peptidase [Naegleria gruberi]
 gi|284089505|gb|EFC43162.1| ubiquitin carboxyl-terminal peptidase [Naegleria gruberi]
          Length = 719

 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 152/331 (45%), Gaps = 57/331 (17%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 258
           + PRG+ N  N C++NA LQ L+S   F  +++ L    +    YP    FV  V+++ T
Sbjct: 274 IQPRGMTNINNSCYMNAVLQTLVSLPQFYHVMKRLGKISLDNEEYPLTNKFVRLVNEYQT 333

Query: 259 ------PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPR-------QE 305
                  SG   +KK+       + F  +  E ++ ++  D     S           Q 
Sbjct: 334 MKTHRPQSGKEGEKKD------RKYFINASTEHLVPSYIVDYIQQSSTNLEDAFLLGTQH 387

Query: 306 DAQEFLSFIMDQMHDELLKLQG------------------ESTSINGANTALVSLAEEDE 347
           DA EFL+ I+ ++H+EL K +                   E+TS      +  + +E  E
Sbjct: 388 DAHEFLNHILQRLHEELKKTEATLGRKSPSASKKKSNKKQEATSEQAEQPSTETTSE--E 445

Query: 348 WETVGPKNKSAVTRTQSFLPSA-LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYS 405
           W+ VG KNK+   R      S+ ++  F G++KS V+ QG +K S+ V+PF  LHL I  
Sbjct: 446 WKEVGKKNKANPMREHEMGDSSVIARTFAGKMKSFVQKQGESKGSSVVEPFFSLHLPIKD 505

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS- 464
           E +  ++ ALR  +  EN+      S+             I  L K+L+LHL RF + S 
Sbjct: 506 ENIKGVKFALREMTKEENVSDKNAKSS-------------IYQLPKVLLLHLRRFDFSST 552

Query: 465 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEVL 495
           +G  K+ K +RF  +L +  D  V P+ + +
Sbjct: 553 EGVQKISKRIRFDYELNI--DEKVVPNVKAI 581


>gi|361129295|gb|EHL01207.1| putative ubiquitin carboxyl-terminal hydrolase 3 [Glarea lozoyensis
           74030]
          Length = 608

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 145/313 (46%), Gaps = 52/313 (16%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 256
           L PRGL+N+GN+C++N+ LQ L+SC PF   L ++  R     K+  P + A + F+ ++
Sbjct: 178 LKPRGLVNTGNMCYMNSVLQVLVSCVPFYSFLDQVGKRAAHSFKSDTPLIDAMIMFMREY 237

Query: 257 DTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
                  S      + K   + D G  F P     V K+ T                   
Sbjct: 238 PVIDSAVSVEKLRMRLKQGELEDYGEAFIPEFVYDVTKHLT------------------- 278

Query: 311 LSFIMDQMHDELLKLQGESTSINGANTAL-----------VSLAEEDEWETVGPKNKSAV 359
             F   ++H+E  ++   STS + +  A               A E+ W  VG K K++ 
Sbjct: 279 -RFSAMRLHEECERIMRASTSNSASAIATPKNNPASPTEDAPSANENGWLEVGRKQKAST 337

Query: 360 TRTQSF--LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 417
           T++     +PS +++IFGG+L++ V+  G   S T+  F  L LDI +  V+ I +AL+ 
Sbjct: 338 TQSSGIIAIPSPITNIFGGKLRTEVRRPGQTDSVTITHFETLQLDIGAPNVNNIVEALKG 397

Query: 418 FSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVR 475
            S  E LE    +S G        K   + +L  +LILHL RF Y  +   ++K+ K V 
Sbjct: 398 LSRSEILE----TSAGRGA-----KQDFLDSLPSVLILHLKRFQYDEKTNATSKIWKKVG 448

Query: 476 FPLQLVLGRDLLV 488
           +PL L + +++  
Sbjct: 449 YPLDLEIPKEVFT 461


>gi|342319815|gb|EGU11761.1| Ubiquitin carboxyl-terminal hydrolase [Rhodotorula glutinis ATCC
           204091]
          Length = 974

 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 74/191 (38%), Positives = 104/191 (54%), Gaps = 7/191 (3%)

Query: 304 QEDAQEFLSFIMDQMHDELLKLQ--GESTSINGANTALVSLAEEDE-WETVGPKNKSAVT 360
           QEDA+EFL F ++ +H+E++K+    E           +S A  DE WE VG K + A T
Sbjct: 686 QEDAEEFLGFFLETLHEEVVKIMELEEKKEQGKGKGKAISQAGGDEGWEEVGSKGRVATT 745

Query: 361 RTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
           RT     S ++ IFGG+L+SV++  G K S T++PF  L LDI  + V +IEDAL   +A
Sbjct: 746 RTTETKESPITRIFGGKLRSVLRCPGQKDSVTIEPFQRLQLDIQPDHVLSIEDALVQLTA 805

Query: 421 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQ 479
           PE+L  Y TS       + A K V +  L  +LILHL RF Y   G   K  K V +  +
Sbjct: 806 PESLPDYVTS---RGRTLDATKQVFLDALPPVLILHLKRFLYDEVGGVQKSTKKVAYGTE 862

Query: 480 LVLGRDLLVTP 490
           L +   ++  P
Sbjct: 863 LAIDERVMSAP 873



 Score = 52.0 bits (123), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/30 (73%), Positives = 24/30 (80%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLL 230
           PRGLIN+GNLCF NATLQAL+ C  F  LL
Sbjct: 530 PRGLINNGNLCFANATLQALVYCGAFWNLL 559


>gi|448114672|ref|XP_004202635.1| Piso0_001480 [Millerozyma farinosa CBS 7064]
 gi|359383503|emb|CCE79419.1| Piso0_001480 [Millerozyma farinosa CBS 7064]
          Length = 868

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 145/318 (45%), Gaps = 63/318 (19%)

Query: 190 NEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAF 249
           N PV  +K    RGL N+GN+C++NA LQ L+ C PF ++L+ + T+ +   G  + T  
Sbjct: 427 NTPVYKIKK---RGLTNTGNICYMNAILQILLYCEPFNKMLKLIETKTVGNLGNKSSTPL 483

Query: 250 VGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPR---QED 306
           +  V  F      S +  N S     + F+   F   L      + N      +   QED
Sbjct: 484 LDLVIKFFNEFSSSQRNSNAS----NKAFAVENFYLSL------IANEKFQHLKWGQQED 533

Query: 307 AQEFLSFIMDQMHDELLKLQGESTS--ING------------------------------ 334
           A+EFL +++D +H+E +      T+  ++G                              
Sbjct: 534 AEEFLGYLLDGLHEEFVNATKSLTTPQVDGLIQNFQKMHDGNDDYTVHEFKANVKNTMKI 593

Query: 335 -------ANTALVSLAEEDEWETVGPKN-KSAVTRTQSFLPSALSDIFGGQLKSVVKAQG 386
                  AN    + ++ D W  VG  N K +  RT    PS +++IFGGQ +SV++   
Sbjct: 594 LKKYAEPANEREDAESDNDGWAEVGSNNRKVSAKRTVEIEPSPITNIFGGQFRSVLQIPK 653

Query: 387 NKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSV 444
           +K S   T+ P+  + LDI   A+ TIE+A +  + PE +  Y++++      V AKK  
Sbjct: 654 SKESESITLDPYQCIQLDISDPAIGTIEEAFKHMNEPEKIP-YKSANKE----VIAKKQT 708

Query: 445 KIQTLSKILILHLMRFSY 462
            I  L   L++HL RFSY
Sbjct: 709 FIDQLPNALVIHLKRFSY 726


>gi|448112101|ref|XP_004202009.1| Piso0_001480 [Millerozyma farinosa CBS 7064]
 gi|359464998|emb|CCE88703.1| Piso0_001480 [Millerozyma farinosa CBS 7064]
          Length = 868

 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 145/318 (45%), Gaps = 63/318 (19%)

Query: 190 NEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAF 249
           N PV  +K    RGL N+GN+C++NA LQ L+ C PF ++L+ + T+ +   G  + T  
Sbjct: 427 NTPVYKIKK---RGLTNTGNICYMNAILQILLYCEPFNKMLKLVETKTVGNLGNKSSTPL 483

Query: 250 VGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPR---QED 306
           +  V  F      S +  N ++    +PF+   F   L      + N      +   QED
Sbjct: 484 LDLVIKFFNEFSSSQRNSNGTI----KPFAVENFYLSL------IANEKFQHLKWGQQED 533

Query: 307 AQEFLSFIMDQMHDELLKLQGESTS--------------------------INGANTALV 340
           A+EFL +++D +H+E +      T+                           N  NT  +
Sbjct: 534 AEEFLGYLLDGLHEEFVNATKSLTTPQIDGLIQDFQKMHDGSDDYTVREFKANVKNTMKI 593

Query: 341 -------------SLAEEDEWETVGPKN-KSAVTRTQSFLPSALSDIFGGQLKSVVKAQG 386
                        + ++ D W  VG  + K +  RT    PS ++ IFGGQ +SV++   
Sbjct: 594 LKKYTEPASEREDTESDNDGWAEVGSNHRKVSAKRTVEIEPSPITSIFGGQFRSVLQIPK 653

Query: 387 NKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSV 444
           +K S   T+ P+  + LDI   ++ TIE+A +  + PE +  Y+ ++      V AKK  
Sbjct: 654 SKESESITLDPYQCIQLDISDPSIGTIEEAFKHMNEPEKIP-YKAANKE----VIAKKQT 708

Query: 445 KIQTLSKILILHLMRFSY 462
            I  L  +L++HL RFSY
Sbjct: 709 FIDQLPNVLVIHLKRFSY 726


>gi|190345632|gb|EDK37554.2| hypothetical protein PGUG_01652 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 726

 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 145/316 (45%), Gaps = 57/316 (18%)

Query: 202 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPTLTAFVGFVSDFDT 258
           +GL N+GN+C++NA LQ L+ C PF ++L+ + T+    + K+  P L A + F  D   
Sbjct: 343 KGLTNTGNICYMNAVLQVLLYCEPFNRMLKAIETKTAASLGKSDTPLLDATIKFFEDMSE 402

Query: 259 PSGGSSKKKNISVLDIG-RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
           PS     KK +S  D   R  +   F  +                +QEDA+EFL+  +D 
Sbjct: 403 PS-----KKALSPDDFYMRLIAHDKFSHLKWG-------------QQEDAEEFLNLFLDG 444

Query: 318 MHDE---------------LLKLQGESTSINGANTALVSLAEEDE-----WETVGPKNKS 357
           + +E               +L+  G+ T       A+  + ++ +     W  V    K+
Sbjct: 445 LREEFIAVVRGLTPEQVNRVLEHGGDETYRQNVKAAVNMIQKKKDDNDEGWNEVAGTKKA 504

Query: 358 AVTRTQSFLPSALSDIFGGQLKSVVKAQGNK--ASATVQPFLLLHLDIYSEAVHTIEDAL 415
           +  RT    PS +S IFGGQ +SV++   +K   S T+ PF  + LDI  +++ TIEDA 
Sbjct: 505 SAKRTVQVEPSPISMIFGGQFRSVLQVPKSKEAQSITLDPFSCVPLDISDDSITTIEDAF 564

Query: 416 RLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY----GSQGSTKLH 471
             F   E L  ++         V AKK   I  L  IL++ L RFSY     + G  KL 
Sbjct: 565 VRFGETEEL-AFKE--------VVAKKQTFIDQLPPILLIQLKRFSYQLGENAGGIEKLK 615

Query: 472 KSVRFPLQLVLGRDLL 487
           K V +   L L  + L
Sbjct: 616 KKVAYSHTLTLPNECL 631


>gi|302422160|ref|XP_003008910.1| ubiquitin carboxyl-terminal hydrolase [Verticillium albo-atrum
           VaMs.102]
 gi|261352056|gb|EEY14484.1| ubiquitin carboxyl-terminal hydrolase [Verticillium albo-atrum
           VaMs.102]
          Length = 879

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 140/296 (47%), Gaps = 55/296 (18%)

Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFV 253
           + VK + PRGL+N GN+C++N+         PF                           
Sbjct: 478 EKVKYVEPRGLVNIGNMCYMNS------RKGPF--------------------------- 504

Query: 254 SDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 313
            +F  P+    +       + G  F+P   E + +   PD       R  Q+DA+EF   
Sbjct: 505 -EFQEPNTHPGR-------NYGTSFTP---EFIYQAIEPDKRFENMRRGHQQDAEEFFGL 553

Query: 314 IMDQMHDELLKLQGESTSINGANTALVSL---AEEDEWETVGPKNKSAVTRTQSFLPSA- 369
           ++  + DE  K+ G + S N  + A  S    A  D W  VG K ++AVTR+     S  
Sbjct: 554 LLQSLDDECAKVMGVA-SGNAPHPAPASANADATADGWLEVGAKQRAAVTRSSGASSSTP 612

Query: 370 LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE--GY 427
           ++ IFGG L+S ++  G + S T +P+  L LDI +  V  + DAL+  +A E LE  G+
Sbjct: 613 ITQIFGGLLRSELRVTGKQDSITTEPYQALQLDIGANDVRNVVDALKRLTAHEKLEGSGF 672

Query: 428 RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ-GSTKLHKSVRFPLQLVL 482
            +    NA VV   K   I TL  +LILHL RF + ++ G+TK+ K V +PL+L +
Sbjct: 673 NSPHGKNATVV---KQTLIDTLPPVLILHLKRFHFDAEGGTTKIWKKVGYPLELEI 725


>gi|320583155|gb|EFW97371.1| Ubiquitin-specific protease [Ogataea parapolymorpha DL-1]
          Length = 493

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 139/292 (47%), Gaps = 54/292 (18%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK--AGYPTLTAFVGFVSDF 256
           L P GL+N+GN+C++NA LQAL +C PF Q+L  +R   + +  +  P + A V     F
Sbjct: 81  LAPHGLVNNGNICYMNAILQALFACRPFSQMLFAVRHLSLGRLESHTPIMDALVALHDAF 140

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
           +        K +  VL      +P+ F   +    P   +   G  RQEDA+EFL +++D
Sbjct: 141 N--------KSSPEVL------TPTGFYGSIARL-PRFSHLKWG--RQEDAEEFLGYLLD 183

Query: 317 QMHDEL---LKLQGES------------TSINGANTALVSL----------AEEDEWETV 351
            +H+E    +K   ES             ++   N+AL  +           E++ W  V
Sbjct: 184 GLHEEFVDSIKRLAESDIADLRASIKDPQTLKTLNSALEMIKTGQINGSTEKEDNGWMEV 243

Query: 352 GPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASA-TVQPFLLLHLDIYSEAVHT 410
           G   K AV R     PS +  +FGG  +SV++   NK S+ T+ PF+ + L+I  + ++ 
Sbjct: 244 GANQKMAVKRQVDVKPSPVVQMFGGHFRSVLQVPNNKKSSITLDPFMHVQLEISDKDINN 303

Query: 411 IEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 462
           +  A   F+  E +         + G  TAKK   I  L  +LI+HL RFS+
Sbjct: 304 LYTAFEKFATVEEI---------SYGDQTAKKQNLIDKLPTVLIIHLKRFSF 346


>gi|326472284|gb|EGD96293.1| ubiquitin C-terminal hydrolase [Trichophyton tonsurans CBS 112818]
          Length = 879

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 114/199 (57%), Gaps = 14/199 (7%)

Query: 301 RPRQEDAQEFLSFIMDQMHDELL-----KLQGESTSINGANTALVSLAEE---DEWETVG 352
           R  Q+DAQEFL F+++++HDE L      +  +S     ++    S+A++   D W  VG
Sbjct: 500 RGHQQDAQEFLGFLLEELHDECLLATKNAMADKSDVSTSSDMDAHSIADDSTGDGWLEVG 559

Query: 353 PKNKSAVTRT--QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHT 410
            K K++VTR+   S   S ++ IF G+++S  +  GNK S T++P+  L LDI S  V+ 
Sbjct: 560 HKQKASVTRSSGDSSGESPITRIFSGKIRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNN 619

Query: 411 IEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGST 468
           I DAL+  + PE + G   SS G    V A K V I+ L  +LILHL RF Y   + G+ 
Sbjct: 620 IIDALKGLTKPETMHGDFQSSRGPK--VNATKQVFIENLPPVLILHLKRFQYDNVTNGTQ 677

Query: 469 KLHKSVRFPLQLVLGRDLL 487
           K+ K + +PL+L + +++ 
Sbjct: 678 KIWKKIGYPLELEIPKEVF 696


>gi|146420045|ref|XP_001485981.1| hypothetical protein PGUG_01652 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 726

 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 145/315 (46%), Gaps = 55/315 (17%)

Query: 202 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPTLTAFVGFVSDFDT 258
           +GL N+GN+C++NA LQ L+ C PF ++L+ + T+    + K+  P L A + F  D   
Sbjct: 343 KGLTNTGNICYMNAVLQVLLYCEPFNRMLKAIETKTAASLGKSDTPLLDATIKFFEDMSE 402

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P              + +  SP  F   ++    D  + +    +QEDA+EFL+  +D +
Sbjct: 403 P--------------LKKALSPDDF--YMRLIAHDKFSHLKWG-QQEDAEEFLNLFLDGL 445

Query: 319 HDE---------------LLKLQGESTSINGANTALVSLAEEDE-----WETVGPKNKSA 358
            +E               +L+  G+ T       A+  + ++ +     W  V    K++
Sbjct: 446 REEFIAVVRGLTPEQVNRVLEHGGDETYRQNVKAAVNMIQKKKDDNDEGWNEVAGTKKAS 505

Query: 359 VTRTQSFLPSALSDIFGGQLKSVVKAQGNK--ASATVQPFLLLHLDIYSEAVHTIEDALR 416
             RT    PS +S IFGGQ +SV++   +K   S T+ PFL + LDI  +++ TIEDA  
Sbjct: 506 AKRTVQVEPSPISMIFGGQFRSVLQVPKSKEAQSITLDPFLCVPLDISDDSITTIEDAFV 565

Query: 417 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY----GSQGSTKLHK 472
            F   E L  ++         V AKK   I  L  IL++ L RF Y     + G  KL K
Sbjct: 566 RFGETEEL-AFKE--------VVAKKQTFIDQLPPILLIQLKRFLYQLGENAGGIEKLKK 616

Query: 473 SVRFPLQLVLGRDLL 487
            V +   L L  + L
Sbjct: 617 KVAYSHTLTLPNECL 631


>gi|351694798|gb|EHA97716.1| Ubiquitin carboxyl-terminal hydrolase 10 [Heterocephalus glaber]
          Length = 668

 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 146/308 (47%), Gaps = 18/308 (5%)

Query: 163 NIDGRDQNAAA--CNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQAL 220
            ++  D NAA   C    + S  +    IN+P KS   L      +S +      T  +L
Sbjct: 300 TVESTDSNAAKLECMPPPANSALLAPIPINQPPKSWASLFHDAKPSSSSPVVYVETKCSL 359

Query: 221 MSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFD--------TPSGGSSKKKNISVL 272
            + SP V   Q      +P +  P        + +           PS  +   K +  +
Sbjct: 360 PASSPLVSEKQVEVKGLVPVSEDPVPMQIAELLENITLAHKPVSWQPSCQALGDKIMRAI 419

Query: 273 DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSI 332
             G  F P+    +L      + +S+S + RQEDA+E+L  I++ +H+E+L L+  S   
Sbjct: 420 HPGAAFEPTYIYRLLTV----IKSSLSEKGRQEDAEEYLDLILNGLHEEMLSLK-RSPLT 474

Query: 333 NGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASAT 392
           N           E+EWE VGP+NK +VT    F+   ++ IFGG ++SVV  Q +K SAT
Sbjct: 475 NNEEQQEQGEGHEEEWEQVGPRNKMSVTHQADFIQIPITSIFGGHIRSVVYQQSSKESAT 534

Query: 393 VQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKI 452
           +QPF +L LDI S+ + T+EDAL    A E+++GY T +      V   + V ++ L  +
Sbjct: 535 LQPFFMLQLDIKSDKICTMEDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPV 591

Query: 453 LILHLMRF 460
            +LHL  F
Sbjct: 592 FVLHLKCF 599


>gi|363753770|ref|XP_003647101.1| hypothetical protein Ecym_5544 [Eremothecium cymbalariae
           DBVPG#7215]
 gi|356890737|gb|AET40284.1| hypothetical protein Ecym_5544 [Eremothecium cymbalariae
           DBVPG#7215]
          Length = 834

 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 171/389 (43%), Gaps = 91/389 (23%)

Query: 191 EPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGY---PTLT 247
           E  K++  ++PRG++N GN+CF+++ LQ L+ C PF+ +L  + TR   K+     P L 
Sbjct: 378 ETTKAINTIVPRGILNKGNICFMSSVLQVLLFCKPFISMLNAVCTRTGTKSSCSLPPLLD 437

Query: 248 AFVGFVSDFD------------TPSGGSSK-KKNISVLDIGRPFSPSMFEAVLKNFTPDV 294
           A + F  +FD            + SG + K  K ++ L +     P  F   +   +  +
Sbjct: 438 ACLDFYKEFDKGNFEKERGEKQSISGNNGKASKGVTRLPLADVIDPESFYKSISKLS--M 495

Query: 295 PNSISGRPRQEDAQEFLSFIMDQMHDELL---------------------KLQGE----- 328
              +     QEDA+EFL+  +DQ+H+E +                     +L+ E     
Sbjct: 496 FRELQW-GHQEDAEEFLTHFLDQLHEEFVSAINTLSSNEIMNLLQSISDDELKTEFIRSL 554

Query: 329 -----STSINGANTALVSLAE---------------ED--EWETV---GPKNKSAVTRTQ 363
                S  +   +  L +L E               ED  EW  V   G + K+AV RT 
Sbjct: 555 PKYKSSDFVRKMSAELKTLIENYGSNPESESNSNGDEDICEWHEVSKKGKRAKNAVKRTM 614

Query: 364 SFLPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
              PS +  IFGG+ +SV+    NK S   T+ PF  LHL I    V+ +E A + FS  
Sbjct: 615 EVEPSPIMSIFGGEYRSVLDIPQNKESQSITLDPFYTLHLHISDPEVNDLESAFKKFSDF 674

Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS-------------- 467
           E L  Y+  S GN   V AKK   I  L ++L++ L RF + +  S              
Sbjct: 675 EYL-PYKADS-GND--VEAKKQAFIDRLPQVLLIQLKRFEFVNNNSERRELVNYNAYNGR 730

Query: 468 -TKLHKSVRFPLQLVLGRDLLVTPSAEVL 495
             K+ K +++   L + ++ L + +A+ L
Sbjct: 731 IEKICKWIKYDHDLTIPKEALSSINAKFL 759


>gi|50307989|ref|XP_453994.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49643129|emb|CAG99081.1| KLLA0E01013p [Kluyveromyces lactis]
          Length = 774

 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 161/372 (43%), Gaps = 93/372 (25%)

Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGY--PTLTAFVG 251
           K + +L+PRG+ N G++CF+++ LQ L+ C  FV LL  + T  + +     P L A + 
Sbjct: 329 KLITELVPRGIYNKGSICFISSVLQLLIHCRSFVNLLNVIHTTTVSRTNSVSPLLNACMD 388

Query: 252 FVSDFD----------------TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVP 295
               FD                T S  S+  +NI  +D   PF  S+      +  P   
Sbjct: 389 VFKRFDRETIVNELNETRENSKTKSKSSNLNENIISID-PEPFYKSI------STLPKFK 441

Query: 296 NSISGRPRQEDAQEFLSFIMDQMHDEL----------------------------LKLQG 327
           +   GR  QEDA+EFL+ ++DQ+H+E                             LK   
Sbjct: 442 DLTWGR--QEDAEEFLTHMLDQLHEEFIGSINTLNSNDILNIFQSLQEDDQKVFFLKYIS 499

Query: 328 ESTSINGANTALVSLA--------------EED-EWETV---GPKNKSAVTRTQSFLPSA 369
           +  S + A     SL               EED EW+ V   G K+K+A  R      S 
Sbjct: 500 KYKSASFAEKPEQSLKALFEKYKQTNDLSDEEDKEWKEVSKKGKKSKNASKRITEVESSP 559

Query: 370 LSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY 427
           +S IFGGQ +SV+    NK S   T  PF  + LDI S  V  +E A + FS  E++E  
Sbjct: 560 ISTIFGGQFRSVLDTPQNKESQSITYDPFQTIQLDISSPDVIDLESAFKKFSEQESIE-- 617

Query: 428 RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST--------------KLHKS 473
             SS+GN   V AKK   I  L + L++   RFS+ SQ S               K+ K 
Sbjct: 618 LKSSSGND--VEAKKHTCIDKLPQALLIQFKRFSFVSQSSKNDLSNYNSFNGRIEKIRKM 675

Query: 474 VRFPLQLVLGRD 485
           V++  +L + ++
Sbjct: 676 VKYNHELTIPKE 687


>gi|256272053|gb|EEU07065.1| Ubp3p [Saccharomyces cerevisiae JAY291]
          Length = 912

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 150/342 (43%), Gaps = 81/342 (23%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPTLTAFV 250
           +V  ++PRG+IN  N+CF+++ LQ L+ C PF+ ++  L TR+    +  +    L A +
Sbjct: 453 AVHSIIPRGIINRANICFMSSVLQVLLYCKPFIDVINVLSTRNTNSRVGTSSCKLLDACL 512

Query: 251 GFVSDFDTPSGGSSKKKNISVLDIGRPFSPS---------MFE--AVLKNFTPD-VPNSI 298
                FD  +    +KK +   D     + S          F+  A      PD    ++
Sbjct: 513 TMYKQFDKET---YEKKFLENADDAEKTTESDAKKSSKSKSFQHCATADAVKPDEFYKTL 569

Query: 299 SGRPR--------QEDAQEFLSFIMDQMHDEL---------------------------- 322
           S  P+        QEDA+EFL+ ++DQ+H+EL                            
Sbjct: 570 STIPKFKDLQWGHQEDAEEFLTHLLDQLHEELISAIDGLTDNEIQNMLQSINDEQLKVFF 629

Query: 323 ---LKLQGESTSINGANTALVSL-----------AEEDEWETV------GPKNKSAVTRT 362
              L   G++  I  A+  L  L            EE+ W  V      G K K+A  RT
Sbjct: 630 IRNLSRYGKAEFIKNASPRLKELIEKYGVINDDSTEENGWHEVSGSSKRGKKTKTAAKRT 689

Query: 363 QSFLPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
              +PS +S +FGGQ +SV+    NK S   T+ PF  + LDI    V+ +E A + FS 
Sbjct: 690 VEIVPSPISKLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDAGVNDLETAFKKFSE 749

Query: 421 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 462
            E L     SS+GN   V AKK   I  L ++L++   RFS+
Sbjct: 750 YELLPF--KSSSGND--VEAKKQTFIDKLPQVLLIQFKRFSF 787


>gi|344299919|gb|EGW30259.1| hypothetical protein SPAPADRAFT_57083 [Spathaspora passalidarum
           NRRL Y-27907]
          Length = 511

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 154/347 (44%), Gaps = 84/347 (24%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG---YPTLTAFVGFVSDFD 257
           PRGL N+GN+C++N+ LQ L+ C PF +LL+ +  + I   G    P L A +   + F 
Sbjct: 129 PRGLANTGNICYMNSILQILLYCEPFNRLLKLIHDKSIGNLGASPTPMLDATIKLFNQFK 188

Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPR--------QEDAQE 309
                 +            P SP  F            NS++ +P+        QEDA+E
Sbjct: 189 PDEESKT------------PISPDEFY-----------NSLTAQPKFSHLKWGQQEDAEE 225

Query: 310 FLSFIMDQMHDELL------------------KLQGESTSIN----GANTALVSLAEEDE 347
           FL + +D +++E L                   L+    ++N       T +  +  E +
Sbjct: 226 FLGYYLDGLNEEFLGVLKKLNTPMIDSLIQHYSLENGVETVNKFKYNVKTTMKKVRNESK 285

Query: 348 WE--------------TVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV----KAQGNKA 389
            E               VGPK K  V RT    P+ L+ IFGGQ KSV+         + 
Sbjct: 286 EENDESEDDDDEGEWNEVGPKKKIHVKRTVEVEPTPLNMIFGGQFKSVLTIPKSTNSFQK 345

Query: 390 SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTL 449
           S T  PF  + LDI SEA  TIE AL   +  E +  Y++S+      +  KK   +  L
Sbjct: 346 SITFDPFQHVQLDI-SEA-STIEGALEHLNKVEAI-SYKSSNKE----IQIKKQTFLDKL 398

Query: 450 SKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEV 494
             +LI+HL RFSY +Q     KL K + +   L++ +D+L T SAE+
Sbjct: 399 PPVLIIHLKRFSYSNQDVAIEKLKKKIDYNHDLIIPKDVLST-SAEI 444


>gi|151944869|gb|EDN63128.1| ubiquitin-specific protease [Saccharomyces cerevisiae YJM789]
 gi|190405710|gb|EDV08977.1| ubiquitin carboxyl-terminal hydrolase 3 [Saccharomyces cerevisiae
           RM11-1a]
          Length = 912

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 149/341 (43%), Gaps = 81/341 (23%)

Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPTLTAFVG 251
           V  ++PRG+IN  N+CF+++ LQ L+ C PF+ ++  L TR+    +  +    L A + 
Sbjct: 454 VHSIIPRGIINRANICFMSSVLQVLLYCKPFIDVINVLSTRNTNSRVGTSSCKLLDACLT 513

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPS---------MFE--AVLKNFTPD-VPNSIS 299
               FD  +    +KK +   D     + S          F+  A      PD    ++S
Sbjct: 514 MYKQFDKET---YEKKFLENADDAEKTTESDAKKSSKSKSFQHCATADAVKPDEFYKTLS 570

Query: 300 GRPR--------QEDAQEFLSFIMDQMHDEL----------------------------- 322
             P+        QEDA+EFL+ ++DQ+H+EL                             
Sbjct: 571 TIPKFKDLQWGHQEDAEEFLTHLLDQLHEELISAIDGLTDNEIQNMLQSINDEQLKVFFI 630

Query: 323 --LKLQGESTSINGANTALVSL-----------AEEDEWETV------GPKNKSAVTRTQ 363
             L   G++  I  A+  L  L            EE+ W  V      G K K+A  RT 
Sbjct: 631 RNLSRYGKAEFIKNASPRLKELIEKYGVINDDSTEENGWHEVSGSSKRGKKTKTAAKRTV 690

Query: 364 SFLPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
             +PS +S +FGGQ +SV+    NK S   T+ PF  + LDI    V+ +E A + FS  
Sbjct: 691 EIVPSPISKLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDAGVNDLETAFKKFSEY 750

Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 462
           E L     SS+GN   V AKK   I  L ++L++   RFS+
Sbjct: 751 ELLPF--KSSSGND--VEAKKQTFIDKLPQVLLIQFKRFSF 787


>gi|398364935|ref|NP_011078.3| Ubp3p [Saccharomyces cerevisiae S288c]
 gi|401244|sp|Q01477.1|UBP3_YEAST RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
           Full=Deubiquitinating enzyme 3; AltName: Full=Ubiquitin
           thioesterase 3; AltName:
           Full=Ubiquitin-specific-processing protease 3
 gi|173130|gb|AAA35191.1| ubiquitin-specific processing protease [Saccharomyces cerevisiae]
 gi|603391|gb|AAB64678.1| Ubp3p: ubiquitin-specific protease [Saccharomyces cerevisiae]
 gi|285811784|tpg|DAA07812.1| TPA: Ubp3p [Saccharomyces cerevisiae S288c]
          Length = 912

 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 149/341 (43%), Gaps = 81/341 (23%)

Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPTLTAFVG 251
           V  ++PRG+IN  N+CF+++ LQ L+ C PF+ ++  L TR+    +  +    L A + 
Sbjct: 454 VHSIIPRGIINRANICFMSSVLQVLLYCKPFIDVINVLSTRNTNSRVGTSSCKLLDACLT 513

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPS---------MFE--AVLKNFTPD-VPNSIS 299
               FD  +    +KK +   D     + S          F+  A      PD    ++S
Sbjct: 514 MYKQFDKET---YEKKFLENADDAEKTTESDAKKSSKSKSFQHCATADAVKPDEFYKTLS 570

Query: 300 GRPR--------QEDAQEFLSFIMDQMHDEL----------------------------- 322
             P+        QEDA+EFL+ ++DQ+H+EL                             
Sbjct: 571 TIPKFKDLQWGHQEDAEEFLTHLLDQLHEELISAIDGLTDNEIQNMLQSINDEQLKVFFI 630

Query: 323 --LKLQGESTSINGANTALVSL-----------AEEDEWETV------GPKNKSAVTRTQ 363
             L   G++  I  A+  L  L            EE+ W  V      G K K+A  RT 
Sbjct: 631 RNLSRYGKAEFIKNASPRLKELIEKYGVINDDSTEENGWHEVSGSSKRGKKTKTAAKRTV 690

Query: 364 SFLPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
             +PS +S +FGGQ +SV+    NK S   T+ PF  + LDI    V+ +E A + FS  
Sbjct: 691 EIVPSPISKLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDAGVNDLETAFKKFSEY 750

Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 462
           E L     SS+GN   V AKK   I  L ++L++   RFS+
Sbjct: 751 ELLPF--KSSSGND--VEAKKQTFIDKLPQVLLIQFKRFSF 787


>gi|349577813|dbj|GAA22981.1| K7_Ubp3p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 912

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 149/341 (43%), Gaps = 81/341 (23%)

Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPTLTAFVG 251
           V  ++PRG+IN  N+CF+++ LQ L+ C PF+ ++  L TR+    +  +    L A + 
Sbjct: 454 VHSIIPRGIINRANICFMSSVLQVLLYCKPFIDVINVLSTRNTNSRVGTSSCKLLDACLT 513

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPS---------MFE--AVLKNFTPD-VPNSIS 299
               FD  +    +KK +   D     + S          F+  A      PD    ++S
Sbjct: 514 MYKQFDKET---YEKKFLENADDAEKTTESDAKKSSKSKSFQHCATADAVKPDEFYKTLS 570

Query: 300 GRPR--------QEDAQEFLSFIMDQMHDEL----------------------------- 322
             P+        QEDA+EFL+ ++DQ+H+EL                             
Sbjct: 571 TIPKFKDLQWGHQEDAEEFLTHLLDQLHEELISAIDGLTDNEIQNMLQSINDEQLKVFFI 630

Query: 323 --LKLQGESTSINGANTALVSL-----------AEEDEWETV------GPKNKSAVTRTQ 363
             L   G++  I  A+  L  L            EE+ W  V      G K K+A  RT 
Sbjct: 631 RNLSRYGKAEFIKNASPRLKELIEKYGVINDDSTEENGWHEVSGSSKRGKKTKTAAKRTV 690

Query: 364 SFLPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
             +PS +S +FGGQ +SV+    NK S   T+ PF  + LDI    V+ +E A + FS  
Sbjct: 691 EIVPSPISKLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDAGVNDLETAFKKFSEY 750

Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 462
           E L     SS+GN   V AKK   I  L ++L++   RFS+
Sbjct: 751 ELLPF--KSSSGND--VEAKKQTFIDKLPQVLLIQFKRFSF 787


>gi|323305299|gb|EGA59046.1| Ubp3p [Saccharomyces cerevisiae FostersB]
          Length = 497

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 149/341 (43%), Gaps = 81/341 (23%)

Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPTLTAFVG 251
           V  ++PRG+IN  N+CF+++ LQ L+ C PF+ ++  L TR+    +  +    L A + 
Sbjct: 83  VHSIIPRGIINRANICFMSSVLQVLLYCKPFIDVINVLSTRNTNSRVGTSSCKLLDACLT 142

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPS---------MFE--AVLKNFTPD-VPNSIS 299
               FD  +    +KK +   D     + S          F+  A      PD    ++S
Sbjct: 143 MYKQFDKET---YEKKFLENADDAEKTTESDAKKSSKSKSFQHCATADAVKPDEFYKTLS 199

Query: 300 GRPR--------QEDAQEFLSFIMDQMHDEL----------------------------- 322
             P+        QEDA+EFL+ ++DQ+H+EL                             
Sbjct: 200 TIPKFKDLQWGHQEDAEEFLTHLLDQLHEELISAIDGLTDNEIQNMLQSINDEQLKVFFI 259

Query: 323 --LKLQGESTSINGANTALVSL-----------AEEDEWETV------GPKNKSAVTRTQ 363
             L   G++  I  A+  L  L            EE+ W  V      G K K+A  RT 
Sbjct: 260 RNLSRYGKAEFIKNASPRLKELIEKYGVINDDSTEENGWHEVSGSSKRGKKTKTAAKRTV 319

Query: 364 SFLPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
             +PS +S +FGGQ +SV+    NK S   T+ PF  + LDI    V+ +E A + FS  
Sbjct: 320 EIVPSPISKLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDAGVNDLETAFKKFSEY 379

Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 462
           E L     SS+GN   V AKK   I  L ++L++   RFS+
Sbjct: 380 ELLPF--KSSSGND--VEAKKQTFIDKLPQVLLIQFKRFSF 416


>gi|207345812|gb|EDZ72512.1| YER151Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 912

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 148/341 (43%), Gaps = 81/341 (23%)

Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPTLTAFVG 251
           V  ++PRG+IN  N+CF+++ LQ L+ C PF+ ++  L TR+    +  +    L A + 
Sbjct: 454 VHSIIPRGIINRANICFMSSVLQVLLYCKPFIDVINVLSTRNTNSRVGTSSCKLLDACLT 513

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPS---------MFE--AVLKNFTPD-VPNSIS 299
               FD       +KK +   D     + S          F+  A      PD    ++S
Sbjct: 514 MYKQFDKEI---YEKKFLENADDAEKTTESDAKKSSKSKSFQHCATADAVKPDEFYKTLS 570

Query: 300 GRPR--------QEDAQEFLSFIMDQMHDEL----------------------------- 322
             P+        QEDA+EFL+ ++DQ+H+EL                             
Sbjct: 571 TIPKFKDLQWGHQEDAEEFLTHLLDQLHEELISAIDGLTDNEIQNMLQSINDEQLKVFFI 630

Query: 323 --LKLQGESTSINGANTALVSL-----------AEEDEWETV------GPKNKSAVTRTQ 363
             L   G++  I  A+  L  L            EE+ W  V      G K K+A  RT 
Sbjct: 631 RNLSRYGKAEFIKNASPRLKELIEKYGVINDDSTEENGWHEVSGSSKRGKKTKTAAKRTV 690

Query: 364 SFLPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
             +PS +S +FGGQ +SV+    NK S   T+ PF  + LDI    V+ +E A + FS  
Sbjct: 691 EIVPSPISKLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDAGVNDLETAFKKFSEY 750

Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 462
           E L     SS+GN   V AKK   I  L ++L++   RFS+
Sbjct: 751 ELLPF--KSSSGND--VEAKKQTFIDKLPQVLLIQFKRFSF 787


>gi|452822851|gb|EME29867.1| ubiquitin carboxyl-terminal hydrolase 1 [Galdieria sulphuraria]
          Length = 594

 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 76/210 (36%), Positives = 112/210 (53%), Gaps = 28/210 (13%)

Query: 304 QEDAQEFLSFIMDQMHDEL----------------LKLQGES------TSINGANTALVS 341
           QED+QEFL  I++++H+E+                L+  G+S         + +N +   
Sbjct: 303 QEDSQEFLIHILNELHEEIRTLRKYLEEHLLSSSELQTDGDSEYPKSGIEHHLSNLSFCR 362

Query: 342 LAEEDE--WETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLL 399
             + D+  WE VG K KSA+ R   F  S +S IFGG L+S +   G+K+S + +PFL L
Sbjct: 363 DNDSDDGFWEEVGRKGKSAIIRPFQFQSSWISFIFGGILRSELHRIGSKSSVSREPFLFL 422

Query: 400 HLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMR 459
            LDI S  VH + DALRL+  PE+L+   + +T     V A+K V I+ L ++ IL L R
Sbjct: 423 ELDIQSPHVHNLYDALRLYIEPESLDDVFSETTKQK--VQARKQVTIERLPRVFILQLKR 480

Query: 460 FSY--GSQGSTKLHKSVRFPLQLVLGRDLL 487
           F+   G +   KL K + FP+ L L   LL
Sbjct: 481 FTLRNGDEVYRKLGKHIDFPVDLCLPSMLL 510


>gi|302309414|ref|NP_986805.2| AGR139Cp [Ashbya gossypii ATCC 10895]
 gi|299788348|gb|AAS54629.2| AGR139Cp [Ashbya gossypii ATCC 10895]
 gi|374110054|gb|AEY98959.1| FAGR139Cp [Ashbya gossypii FDAG1]
          Length = 813

 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 165/389 (42%), Gaps = 99/389 (25%)

Query: 191 EPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGY---PTLT 247
           E  K++K  +PRG++N GN+CF+++ LQ L+ C PF+++L  +  R   K+     P L 
Sbjct: 362 ESAKAIKLGIPRGIMNKGNICFMSSVLQVLLFCEPFIEMLNVVHARTGVKSWTLLPPLLG 421

Query: 248 AFVGFVSDF----------DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNS 297
           + + F  +F          D  S G+ K    +         P  F   +    P   + 
Sbjct: 422 SCLEFYKEFEKLHADKDKNDKQSNGNGKSAKANRSSQPDAIDPEHFYKCISKL-PMFKDL 480

Query: 298 ISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTA-----LVSLAEED------ 346
             G   QEDA+EFL+  +DQ+H+E +      +SIN  + +     L SL+++D      
Sbjct: 481 QWGH--QEDAEEFLTHFLDQLHEEFV------SSINSLSCSDMIHLLQSLSDDDLKAEFV 532

Query: 347 ------------------------------------------EWETV---GPKNKSAVTR 361
                                                     EW  V   G K ++ V R
Sbjct: 533 RSLSKYKRAEFIKNMSSELKALIDKYGSALEYDTSEGSENSSEWHEVSKKGKKTRNTVKR 592

Query: 362 TQSFLPSALSDIFGGQLKSVVKAQGNKAS--ATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
           T    PS +  IFGG+ +SV+    NK S   T+ PF  LHL I    V+ +E A + FS
Sbjct: 593 TTELEPSPIMSIFGGEYRSVLDIPQNKESHSITLDPFYTLHLHISDPEVNDLESAFKKFS 652

Query: 420 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS------------ 467
             E L  Y+  S GN   V AKK   +  L ++L++ L RF + +  S            
Sbjct: 653 DFEYL-SYKADS-GND--VEAKKQAFLDRLPRVLLIQLKRFEFVNNSSERRELINYNAYN 708

Query: 468 ---TKLHKSVRFPLQLVLGRDLLVTPSAE 493
               K+ K +R+  +L + ++ L + +A+
Sbjct: 709 GRIEKIRKWIRYDQELTIPKEALSSVNAK 737


>gi|296810276|ref|XP_002845476.1| ubiquitin-specific protease [Arthroderma otae CBS 113480]
 gi|238842864|gb|EEQ32526.1| ubiquitin-specific protease [Arthroderma otae CBS 113480]
          Length = 863

 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 148/295 (50%), Gaps = 38/295 (12%)

Query: 205 INSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSS 264
           ++ GN+C++N+ LQ L+ C PF + L ++  R           A   F SD        S
Sbjct: 412 LSRGNMCYMNSILQVLIFCVPFYEFLDQIGRR-----------AAHSFKSD--------S 452

Query: 265 KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLK 324
              +  V+D       S  E +      +       R  Q+DAQEFL F+++++H+E L 
Sbjct: 453 PLVDAMVIDAA-----SSVEKLRLRLKQNELEEDMRRGHQQDAQEFLGFLLEELHEECLH 507

Query: 325 -----LQGESTSINGANTALVSLAEE---DEWETVGPKNKSAVTRT--QSFLPSALSDIF 374
                +  +S +   ++    S+ +E   D W  VG K K++VTR+       S ++ IF
Sbjct: 508 ATKNAIADKSDASTSSDVDAHSIGDESTGDGWLEVGHKQKASVTRSSGDGSGESPITRIF 567

Query: 375 GGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 434
            G+++S  +  GNK S T++P+  L LDI S  V+ I DAL+  + PE + G   SS G 
Sbjct: 568 SGKIRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTKPETMHGDFQSSRGP 627

Query: 435 AGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQLVLGRDLL 487
              V A K V I+ L  +L+LHL RF Y   + G+ K+ K + +PL+L + +++ 
Sbjct: 628 K--VNATKQVFIEHLPPVLVLHLKRFQYDNVTNGTQKIWKKIGYPLELEIPKEVF 680


>gi|385302493|gb|EIF46622.1| ubiquitin-specific protease [Dekkera bruxellensis AWRI1499]
          Length = 714

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 133/296 (44%), Gaps = 47/296 (15%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG---YPTLTAFVGFVSDFD 257
           P GLIN+ ++C++N+ LQ L  C PF Q+L  +R   +   G    P + A +  + D  
Sbjct: 285 PHGLINTSSICYMNSVLQMLFECEPFSQVLNIIRBSTMGSIGESKMPLVDALL-MLQDLF 343

Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
                 +K    +V+       P  F   +K       N   G  RQEDA+EFL +++D 
Sbjct: 344 KKKRIPAKSITSTVIPRRXSIDPMPFYTAIKKLD-RFSNLEWG--RQEDAEEFLGYLLDG 400

Query: 318 MHDELL-------------------------KLQGESTSI-----NGANTALVSLAEEDE 347
           +H+E +                         K++   TSI      G  T      +  E
Sbjct: 401 LHEEFITSIEDMPLSAAQXFENGLTDPVAVEKVRYAVTSIKNSKGKGCGTEERQEPDGHE 460

Query: 348 WETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVK-AQGNKASATVQPFLLLHLDIYSE 406
           W  V    K +V R+  F PS ++ +FGGQ +SV++ +   K+S T+ PF+ + LDI   
Sbjct: 461 WNEVSANRKISVKRSFEFKPSPIALLFGGQFRSVLQPSNTKKSSVTLDPFMHIQLDISDA 520

Query: 407 AVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 462
              T+E A   FS  E +      + GN    +A+K   I  L  ILI+HL RFS+
Sbjct: 521 TTSTLEGAFEKFSEIEEI------TFGNQ---SARKQNLIDKLPMILIIHLKRFSF 567


>gi|409081963|gb|EKM82321.1| hypothetical protein AGABI1DRAFT_124803 [Agaricus bisporus var.
           burnettii JB137-S8]
          Length = 753

 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 108/201 (53%), Gaps = 17/201 (8%)

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQ-------GESTSINGANTALVSLAEE------DEWE 349
           +QEDA+EFL F +D + +ELL +Q        +++         V   EE      D W 
Sbjct: 472 QQEDAEEFLGFYLDTLEEELLSIQHSLAPPPQKTSKQQQHQPHPVEEKEELEPPVGDGWL 531

Query: 350 TVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVH 409
            VG KN+  +TRT     S ++ +FGG+ KS +KA G K S  V+ +  L LD+  +++H
Sbjct: 532 EVGKKNRMIITRTIKAAESPITRMFGGKFKSTLKAPGQKDSVLVEDWRSLRLDVQPDSIH 591

Query: 410 TIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GS 467
           TI++AL   + P++++    S  G    + A + V ++ L  +L+LH+ RF Y     G 
Sbjct: 592 TIQEALTQITHPQSIQMTHPSQPGI--TIDANQKVLVEALPPVLVLHVKRFWYDVTVGGV 649

Query: 468 TKLHKSVRFPLQLVLGRDLLV 488
            K+ K VRF  +L +G D++V
Sbjct: 650 VKVMKQVRFEPELEIGSDMMV 670



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/32 (65%), Positives = 25/32 (78%)

Query: 202 RGLINSGNLCFLNATLQALMSCSPFVQLLQEL 233
           RGLINSGN+CF NA LQ L+ C+PF +L  EL
Sbjct: 288 RGLINSGNMCFANAVLQVLVYCAPFRRLFIEL 319


>gi|367001536|ref|XP_003685503.1| hypothetical protein TPHA_0D04350 [Tetrapisispora phaffii CBS 4417]
 gi|357523801|emb|CCE63069.1| hypothetical protein TPHA_0D04350 [Tetrapisispora phaffii CBS 4417]
          Length = 854

 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 150/333 (45%), Gaps = 76/333 (22%)

Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR-DIPKAGY---PTLTAFVG 251
           +K+++PRG+INS N+CF+++ LQ L+SC+PF+ +L  +    +I K G      L A + 
Sbjct: 413 IKNIVPRGIINSANICFMSSVLQVLLSCAPFINILNVVSINSNIMKPGVNQTKLLDACIK 472

Query: 252 FVSDFDTPSGGSSKKKN-----------ISVLDIGRPFSPSMFEAVLKNFT--PDVPNSI 298
             S FD  S  + K+K                      SP  F  VL   +   D+    
Sbjct: 473 LYSRFDKESFEAEKEKEKDNESSSKKQSSQYNAKATAISPEEFYKVLSTISKFKDL---- 528

Query: 299 SGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEE------------- 345
                QEDA+EFL+ ++DQ+H+E + +  ES + N     + S+++E             
Sbjct: 529 -KWGHQEDAEEFLTHLLDQLHEEFISV-IESLTNNEVMNLINSISDEELKIFVIKNIAQY 586

Query: 346 ----------------------------DEWETVG------PKNKSAVTRTQSFLPSALS 371
                                       D W  V        K K+A  RT    PS +S
Sbjct: 587 TKAGFNKTPSPQLKALLNKYSSSIESEGDGWHEVSGSSKKGKKTKTAAKRTVEVEPSPIS 646

Query: 372 DIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT 429
           ++FGGQ +SV+    NK S   T+ PF  + LDI  +   TIE A + FS  E L  ++ 
Sbjct: 647 NLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDKETDTIESAFKKFSEYE-LLPFKA 705

Query: 430 SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 462
           SS GN   V AKK   I  L ++L++ L RFS+
Sbjct: 706 SS-GND--VEAKKQTFIDRLPQVLLVQLKRFSF 735


>gi|344230727|gb|EGV62612.1| hypothetical protein CANTEDRAFT_115137 [Candida tenuis ATCC 10573]
          Length = 428

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 147/345 (42%), Gaps = 91/345 (26%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPF---VQLLQELRTRDIPKAGYPTLTAFVGFVSD 255
           +  RGL NSGN+C++N+ LQ L+ C PF    ++L++  T  + ++  P + A +    D
Sbjct: 40  IYSRGLTNSGNICYMNSILQVLIYCEPFNKLFRILEQKSTGSLNESKTPLIDAIISIFRD 99

Query: 256 FDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPR--------QEDA 307
           F T SG  S              SP  F   L           SG  +        QEDA
Sbjct: 100 FST-SGTKS-------------LSPEGFYMKL-----------SGHRKFQHLKWGQQEDA 134

Query: 308 QEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEE---------------------- 345
           +EFL +++D +H+EL+       SI   N   +SL  E                      
Sbjct: 135 EEFLGYLLDGLHEELVH------SIREVNNEQISLLLETVADNETKLQIKNAIKIIKKLN 188

Query: 346 ------------------DEWETVGPKNKSAVT-RTQSFLPSALSDIFGGQLKSVVKAQG 386
                             + W  +G  +K   + RT    PS +  IFGGQ +SV++   
Sbjct: 189 NSSNGGNDNDNSNDDDDNEGWNEIGGGHKKVSSKRTVEIEPSPIKTIFGGQFRSVLQIPN 248

Query: 387 NK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVK 445
            K  S T+ PF  + LDI ++ ++ IEDA +  + PE +         +   V AKK   
Sbjct: 249 KKDQSITLDPFQCIQLDIKADQINNIEDAFKQLNEPEQI----PFKLNDNKEVLAKKQTF 304

Query: 446 IQTLSKILILHLMRFSYGSQGS---TKLHKSVRFPLQLVLGRDLL 487
           I +L  +L++HL RFS+ +  +    KL K + +  +L +  +L 
Sbjct: 305 IDSLPDVLVIHLKRFSFENVNNGNIEKLRKKIEYTHKLSIPLELF 349


>gi|150865443|ref|XP_001384663.2| hypothetical protein PICST_59800 [Scheffersomyces stipitis CBS
           6054]
 gi|149386699|gb|ABN66634.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 489

 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 154/333 (46%), Gaps = 63/333 (18%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDI----PKAGYPTLTAFVGFVSDF 256
           PRGL N+GN+C++N+ LQ L+ C PF +LL+ +  + I      +  P L A + F +DF
Sbjct: 96  PRGLTNTGNICYMNSILQMLLYCVPFNRLLKLIEDKSIGTLNRASPTPLLDATIKFFNDF 155

Query: 257 -DTPSGGSSKKKNISVLDIGRPFSPSMFEAVL---KNFTPDVPNSISGRPRQEDAQEFLS 312
            D  SG SS+ ++ S        SP  F   L   + F      S     +QEDA+EFL 
Sbjct: 156 SDKTSGLSSEVEDAS----ESAISPETFYMTLISHEKF------SHLKWGQQEDAEEFLG 205

Query: 313 FIMDQMHDELL----KLQGEST-------SINGANTALVSLAEEDEWET----------- 350
           + +D +H+E L    KL   S        S    N   VS+ + +   T           
Sbjct: 206 YYLDGLHEEFLSEIRKLNTPSVDSLIQTFSNENENVEKVSMFKFNIKNTVKLIKNENKNN 265

Query: 351 ------VGPKNKS-AVTRTQSFLPSALSDIFGGQLKSV-VKAQGN-----KASATVQPFL 397
                 VG  NK  +V RT    PS ++ IFGG  KSV +  + N     + S T+ PF 
Sbjct: 266 DNEWNEVGSNNKKISVKRTVEIEPSPINMIFGGSFKSVLIVPKANNPNQFQKSITLDPFQ 325

Query: 398 LLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHL 457
            L LDI SEA  TIEDA   F     LE  + S   N   V  KK   I  L ++LI+HL
Sbjct: 326 NLQLDI-SEA-DTIEDA---FLNMNKLE--KISYKNNDKEVQLKKQTFIDRLPEVLIIHL 378

Query: 458 MRFSY---GSQGSTKLHKSVRFPLQLVLGRDLL 487
            RFSY      G  KL K V +   L +  ++L
Sbjct: 379 KRFSYLKDKEVGIEKLRKKVDYAHDLHVPSEVL 411


>gi|149235975|ref|XP_001523865.1| hypothetical protein LELG_04678 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452241|gb|EDK46497.1| hypothetical protein LELG_04678 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 942

 Score =  108 bits (269), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 141/304 (46%), Gaps = 60/304 (19%)

Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK---AGYPTLTAFVGFVS 254
           D+ P+GL N+GN+CF+N+ LQ L+ C PF +LL+ + T+ I +   +  P L A +   +
Sbjct: 555 DVKPKGLTNTGNICFMNSILQILLYCQPFNRLLKLIETKSISELVNSSLPLLDATIKLFN 614

Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
           DF  P    S   +I+      P  P  + A+ K+       S     +QEDA+EFL + 
Sbjct: 615 DFK-PVHSDSSNGSINNGKAAVPIEP-FYHALSKH----SKFSHLRWGQQEDAEEFLGYY 668

Query: 315 MDQMHDELLKLQGESTSINGANTALVSL-------------------------------- 342
           +D +++E L      T++   NT+ V                                  
Sbjct: 669 LDALNEEFL------TALRRLNTSQVDTLIQSYSQEDSHELTKFKYNVKTCIRRIKKEND 722

Query: 343 -AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV---KAQGNKASATVQPFLL 398
             +EDEW  VG K    VT+ +   P+ L+ IFGG+ KS++   K    + S T+ PF  
Sbjct: 723 GEDEDEWNQVGAKKN--VTKVE-VEPTPLNMIFGGEFKSIITIPKGSSFQKSITIDPFQQ 779

Query: 399 LHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLM 458
           L LDI      +I+DA    +  E++    +  + N   +  KK   +  L ++LI+HL 
Sbjct: 780 LQLDI--SQSDSIDDAFLHLNEVESI----SYMSNNNSELQVKKQTFVSKLPEVLIIHLK 833

Query: 459 RFSY 462
           RFSY
Sbjct: 834 RFSY 837


>gi|348669889|gb|EGZ09711.1| hypothetical protein PHYSODRAFT_564244 [Phytophthora sojae]
          Length = 625

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 165/370 (44%), Gaps = 75/370 (20%)

Query: 181 SKEVPMK-AINEPVKSV------KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL 233
           +K +P + AI E +K +      K++  RGL+N GN CF N  +Q++++C PF+ LL E+
Sbjct: 97  AKPLPFEEAIQETLKGLDVSAPAKEMKKRGLVNQGNTCFQNVIMQSVLACPPFLNLLAEI 156

Query: 234 RTRDIPK----AGYPTLTAF---VGFVSDFDTPS------GGSSKKKNISVLDIGRPFSP 280
                P     A   T  A+   V F  +F+ P+        +S ++N + +    P + 
Sbjct: 157 SAATAPTSEMMASTSTFKAWRHMVAFAREFEEPTLAQLHLQAASGERNPNDMHGKVPQAI 216

Query: 281 SM---FEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLK----------LQG 327
            +   F  VL  F          R  QEDA EFL F ++ +H E  K           Q 
Sbjct: 217 RISGYFMDVLSAFQ-------KMRGEQEDALEFLEFFLEYLHSEYEKSGLELPASCEEQT 269

Query: 328 ESTSINGANTALV------SLAEEDEWETVGPKNKSAVTRTQSF--LPSALSDIFGGQLK 379
           + ++    N A+V      + A +D W  VG K KS+V R      + S ++ +F G L+
Sbjct: 270 KRSAAKKQNGAVVDADLENAQAFDDGWAEVGKKGKSSVLRQNPVDTIRSPINWLFKGALR 329

Query: 380 SVVKAQGNKASA-TVQPFLLLHLDIYSEAVH------------------TIEDALRLFSA 420
           S +K  G + S+ TV+PF  LHL++  EA                    TIE+ +R    
Sbjct: 330 SELKQNGKRQSSITVEPFHCLHLNLDYEAQDPSFVTGANGLAKPLSTPITIEEMIRKSFD 389

Query: 421 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG-SQGSTKLHKSVRFPLQ 479
            E +E           V T KK   +++L  +L L + RF+Y   QG  KL + V++P  
Sbjct: 390 VEVIEDVNQ-------VPTMKKFTTVESLPVVLTLSVKRFTYHPEQGPVKLQQFVKYPPS 442

Query: 480 LVLGRDLLVT 489
           L      + T
Sbjct: 443 LEFPTQFMST 452


>gi|444315796|ref|XP_004178555.1| hypothetical protein TBLA_0B01930 [Tetrapisispora blattae CBS 6284]
 gi|387511595|emb|CCH59036.1| hypothetical protein TBLA_0B01930 [Tetrapisispora blattae CBS 6284]
          Length = 1019

 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 151/346 (43%), Gaps = 88/346 (25%)

Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK----AGYPTLTAFVG 251
           +K ++PRG+IN+ N+CF+++ LQ L+ C PF+ +L  +  R+       + +  + A V 
Sbjct: 563 IKSIVPRGIINNANICFMSSVLQVLLYCKPFIDILNVISLRNTNSKSNASSFKLIDACVE 622

Query: 252 FVSDFDTPS----------------GGSSKKKNISVLDIGR------PFSPSMFEAVLKN 289
           F   FD  +                 GS+ K+      +        P +P  F + L  
Sbjct: 623 FYKQFDEETVAKEKLDAINKTTLQDAGSNNKQKAHSASVNNNNGNPSPLNPEQFYSALST 682

Query: 290 FT--PDVPNSISGRPRQEDAQEFLSFIMDQMHDELL---------KLQGESTSINGANTA 338
                D+     G   QEDA+EFL+ ++DQ+H+E +         ++Q    S+N  +  
Sbjct: 683 IYKFKDL-----GWGHQEDAEEFLTHMLDQLHEEFIAGIYFLTDNEIQNLLQSVNDPDLK 737

Query: 339 LV-----------------------------SLAEEDE-----WETV------GPKNKSA 358
           +                              S+ + +E     W  V      G K +SA
Sbjct: 738 IYFIRCLSQYKKAEFMKNISSSLKELISKYGSINDTNEDGSNGWHEVSSSSKKGKKTRSA 797

Query: 359 VTRTQSFLPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALR 416
             RT     S +S +FGGQ +SV+    NK S   T+ PF  + LDI   AV+ ++ A +
Sbjct: 798 AKRTFEIESSPISCLFGGQFRSVLDVPSNKESQSITLDPFQTIQLDISDPAVNDLDSAFK 857

Query: 417 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 462
            FS  E +  +++SS  +   V AKK   I  L  +L++HL RFS+
Sbjct: 858 KFSEFEFI-PFKSSSGAD---VEAKKQTFIDKLPTVLLIHLKRFSF 899


>gi|326433796|gb|EGD79366.1| hypothetical protein PTSG_09776 [Salpingoeca sp. ATCC 50818]
          Length = 612

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 145/306 (47%), Gaps = 36/306 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLT-AFVGFVSDFDTPSG 261
           G++N GN C++NA LQ L S  P V+ +  L    +P +   TLT A   F+ +F + S 
Sbjct: 240 GILNEGNTCYMNAPLQLLFSL-PHVRRV--LLGASVPPS---TLTYALQSFLREFISTSR 293

Query: 262 GS--SKKKNI-SVLDIGRPFSPSMFEAVLKNFTP---DVPNSISGRPRQEDAQEFLSFIM 315
                 ++++  +L + +P S +   A + +  P   D  N       Q DA+E L+F++
Sbjct: 294 LDVLDPRQDVDRILRVAKPLSAAAVYAGIGSRNPSLFDFSN------MQHDAEEVLTFLL 347

Query: 316 DQMHDELLK--------LQGESTSINGAN------TALVSLAEEDEWETVGPKNKSAVTR 361
             +HDELLK          GE  +  GA             A +D WE VGPK  SA   
Sbjct: 348 STVHDELLKHCPTFTGLAPGERDASGGARNADDADADAGDDAGDDGWEEVGPKKTSARLN 407

Query: 362 TQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
                 SA+S +  G  +S +  +  + S  +QPF +L +DI  E    +E+A+    +P
Sbjct: 408 EVKAKLSAVSRVLQGTFRSTIAYKSGQRSIVLQPFFVLQVDIKPE-TKRLEEAIDATFSP 466

Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLV 481
           E +EG + S  G    VTA+K + ++    +L++ L R+ +  Q  TKL   V F   L 
Sbjct: 467 ETIEGVQRS--GAPAAVTARKQLHLERAPPVLLIQLKRYHFDGQQITKLTNHVDFTETLT 524

Query: 482 LGRDLL 487
           L +  L
Sbjct: 525 LKQSWL 530


>gi|448534206|ref|XP_003870774.1| Ubp3 protein [Candida orthopsilosis Co 90-125]
 gi|380355129|emb|CCG24646.1| Ubp3 protein [Candida orthopsilosis]
          Length = 706

 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 158/329 (48%), Gaps = 59/329 (17%)

Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPTLTAFVGF 252
           V D+ P+GL N+GN+CF+N+ LQ+L+ C PF +LL+ + T+   D+  +  P +   +  
Sbjct: 333 VFDIKPKGLTNTGNICFMNSILQSLLYCKPFNKLLKLIETKSIGDLVISSQPLIDTTIKL 392

Query: 253 VSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
            ++F      S  K  +S+     PF  ++  +  KNF            +QEDA+EFL 
Sbjct: 393 FNEF----KPSDNKLPVSI----EPFYSAL--SKHKNF------QHLKWGQQEDAEEFLG 436

Query: 313 FIMDQMHDELL------------KLQGESTSINGAN------TALVSLA------EEDEW 348
           + +D +++E++            +L    T  + A       T +  +       EE EW
Sbjct: 437 YYLDALNEEMIGALKKLNTPQVDQLIQSYTQDDVAKFKYNVKTCIKRIKKDEQEDEESEW 496

Query: 349 ETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVK----AQGNKASATVQPFLLLHLDIY 404
             VG  +K  +T+ +   P+ L+ IFGG+ KSV+     +   + S T+ PF  + LDI 
Sbjct: 497 NEVG--SKKNITKIE-VDPTPLNMIFGGEFKSVITIPKVSSTFQKSITLDPFQHVQLDIS 553

Query: 405 SEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS 464
           +   ++IE+A    +  E +  Y+     N   V  KK   I+ L ++LI+HL RFSY  
Sbjct: 554 NS--NSIEEAFIHLNELETI-SYKG---NNNKEVEVKKQTFIEKLPQVLIIHLKRFSYSK 607

Query: 465 QGST---KLHKSVRFPLQLVLGRDLLVTP 490
                  KL K++ +   L +  ++L  P
Sbjct: 608 DQENAIEKLAKNISYDHTLTIPNEILSQP 636


>gi|392299855|gb|EIW10947.1| Ubp3p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 912

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 146/341 (42%), Gaps = 81/341 (23%)

Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPTLTAFVG 251
           V  ++PRG+IN  N+CF+++ LQ L+ C PF+ ++  L TR+    +  +    L A + 
Sbjct: 454 VHSIIPRGIINRANICFMSSVLQVLLYCKPFIDVINVLSTRNTNSRVGTSSCKLLDACLT 513

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPS---------MFE--AVLKNFTPD-VPNSIS 299
               FD  +    +KK +   D     + S          F+  A      PD    ++S
Sbjct: 514 MYKQFDKET---YEKKFLENADDAEKTTESDAKKSSKSKSFQHCATADAVKPDEFYKTLS 570

Query: 300 GRPR--------QEDAQEFLSFIMDQMHDEL----------------------------- 322
             P+        QEDA+EFL+ ++DQ+H+EL                             
Sbjct: 571 TIPKFKDLQWGHQEDAEEFLTHLLDQLHEELISAIDGLTDNEIQNMLQSINDEQLKVFFI 630

Query: 323 --LKLQGESTSINGANTALVSL-----------AEEDEWETVGPKNKSAVT------RTQ 363
             L   G++  I  A+  L  L            EE+ W  V   +K          RT 
Sbjct: 631 RNLSRYGKAEFIKNASPGLKELIEKYGVINDDSTEENGWHEVSGSSKKGKKTKTAAKRTV 690

Query: 364 SFLPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
             +PS +S +FGGQ +SV+    NK S   T+ PF  + LDI    V+ +E A + FS  
Sbjct: 691 EIVPSPISKLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDAGVNDLETAFKKFSEY 750

Query: 422 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 462
           E L     SS+GN   V AKK   I  L ++L++   RFS+
Sbjct: 751 ELLPF--KSSSGND--VEAKKQTFIDKLPQVLLIQFKRFSF 787


>gi|393245707|gb|EJD53217.1| cysteine proteinase [Auricularia delicata TFB-10046 SS5]
          Length = 826

 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 146/309 (47%), Gaps = 61/309 (19%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL-----------------------RT 235
           + PRGLIN GNLCF NA LQAL+ C+PF +L  EL                       R 
Sbjct: 415 IRPRGLINGGNLCFANAILQALVYCTPFHRLFVELGRLSAAAAAAPATQSKLRGAVGARL 474

Query: 236 RDIPKAGYPTLTAFVGFVSDF-DTPSGGSSKKKNISVLDIGR--PFSPSMFEAVLK---N 289
              P    P + A + F+ +F   P+  +S++++ +    G    F P+     LK    
Sbjct: 475 GATPT---PLVDATINFLDEFAPVPAQTASEERDRARSPSGDSDAFIPTYIYDALKEKKR 531

Query: 290 FTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSIN------GANTALVSLA 343
           F     +S+  R  QEDA+EFL F +D + +ELL L  + +         G   A   + 
Sbjct: 532 F-----DSMR-RGHQEDAEEFLGFYLDTLEEELLALLADLSPAASGSKQPGPVAAKSEVV 585

Query: 344 EE---------DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGN-KASATV 393
           EE         + W  VG +N++ V        S +S +FGG+ +SV++  G  + S  V
Sbjct: 586 EESGSELGVNEEGWTEVGRRNRAVVVTNIKTTESPISRVFGGKFRSVLRTPGTGRDSVMV 645

Query: 394 QPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKIL 453
           Q +  L LDI    V++I DALR  SAPE ++   +S+        A K V++  L  +L
Sbjct: 646 QDWNRLQLDIQPPHVNSITDALRNLSAPELVQVGPSST-------EATKQVQLDVLPAVL 698

Query: 454 ILHLMRFSY 462
           +LHL RF+Y
Sbjct: 699 VLHLKRFAY 707


>gi|301113318|ref|XP_002998429.1| ubiquitin-specific protease, putative [Phytophthora infestans
           T30-4]
 gi|262111730|gb|EEY69782.1| ubiquitin-specific protease, putative [Phytophthora infestans
           T30-4]
          Length = 620

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 151/336 (44%), Gaps = 57/336 (16%)

Query: 189 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA------- 241
           ++ P K +K    RGL+N GN CF N  +Q++++C PF+ LL E+ +   P A       
Sbjct: 119 VSSPAKEMKK---RGLVNQGNTCFQNVIMQSVLACPPFLNLLAEISSTSPPTAEMLASTS 175

Query: 242 GYPTLTAFVGFVSDFDTPS------GGSSKKKNISVLDIGRPFSPSM---FEAVLKNFTP 292
            +      V F  +F+ P+        ++ ++N++ +    P +  +   F  VL  F  
Sbjct: 176 TFKAWRHMVAFTREFEEPTLAQLQLQAANGERNLNDMHGKTPQAIRISGYFMDVLSAFQ- 234

Query: 293 DVPNSISGRPRQEDAQEFLSFIMDQMHDELLK----------LQGESTSINGANTALVSL 342
                   R  QEDA EFL F ++ +H E  K           Q +      A  A   +
Sbjct: 235 ------KMRGEQEDALEFLEFFLEYLHTEYEKSGLELPSSCEKQTKRRPSTAAKPAEADV 288

Query: 343 AEE------DEWETVGPKNKSAVTRTQSF--LPSALSDIFGGQLKSVVKAQGNKASA-TV 393
           A E      D W  VG K KS+V R      + S ++ +F G L+S +K  G + S+ TV
Sbjct: 289 AFENAQAFDDGWAEVGKKGKSSVLRQNPVDTIRSPINWLFKGALRSELKQNGKRQSSITV 348

Query: 394 QPFLLLHLDIYSEA-----VHTIEDALRLFSAPENLE-----GYRTSSTGNAGVV-TAKK 442
           +PF  LHL++  E      V  +    +  SAP  ++      +      +A  + T KK
Sbjct: 349 EPFHCLHLNLDYETQDPSFVTGVYGLAKPLSAPITIQDMIRKSFDVEVIEDANQIPTMKK 408

Query: 443 SVKIQTLSKILILHLMRFSYG-SQGSTKLHKSVRFP 477
              +++L  +L L + RF+Y   QG  KL + V++P
Sbjct: 409 FTTVESLPVVLTLSVKRFTYHPEQGPVKLQQFVKYP 444


>gi|255719840|ref|XP_002556200.1| KLTH0H07370p [Lachancea thermotolerans]
 gi|238942166|emb|CAR30338.1| KLTH0H07370p [Lachancea thermotolerans CBS 6340]
          Length = 781

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 155/331 (46%), Gaps = 73/331 (22%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK---AGYPTLTAFVG 251
           +++ ++PRG++N+GN+CF+++ LQ L+ C PFV L+  +  +   K    G+  L A + 
Sbjct: 340 ALQSVIPRGIVNTGNICFMSSILQVLLFCEPFVNLMNLISVKTSAKMGSTGFLLLDACLE 399

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPR-------- 303
               FD     + +++  S    G   S ++ +A+  +   D   ++S  P+        
Sbjct: 400 LYRKFDK---QAFEREKASRSSSGVNISSALADAIKPD---DFYKTLSKLPKFKDLRWGH 453

Query: 304 QEDAQEFLSFIMDQMHDELL---------KLQGESTSINGANTALV-------------- 340
           QEDA+EFL+ ++DQ+H+E +         ++     SIN  +T  V              
Sbjct: 454 QEDAEEFLTHLLDQLHEEFVNSIDSLSDSEVISLINSINDEDTKTVFIRNLAKYKDAKFI 513

Query: 341 --------SLAEE-------------DEWETV------GPKNKSAVTRTQSFLPSALSDI 373
                   S+ E+             + W+ V      G K K+A  RT    PS +S I
Sbjct: 514 KDSSNEIKSMLEKYDADVDDADDTSGNGWQEVSSTSKKGKKTKTAAKRTVVVEPSPISVI 573

Query: 374 FGGQLKSVVKAQGNKA--SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSS 431
           FGGQ +SV+    NK   S T+ PF  + LDI    V+ ++ A   FS  E+L  ++TSS
Sbjct: 574 FGGQFRSVLDVPQNKEPQSITLDPFQTIQLDISDPDVNDLDSAFLKFSEMEHLP-FKTSS 632

Query: 432 TGNAGVVTAKKSVKIQTLSKILILHLMRFSY 462
             N   V AKK   I  L ++ ++ L RFS+
Sbjct: 633 GNN---VEAKKQTFIDKLPEVFLIQLKRFSF 660


>gi|159485266|ref|XP_001700667.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158272099|gb|EDO97905.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 634

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/205 (36%), Positives = 112/205 (54%), Gaps = 31/205 (15%)

Query: 310 FLSFIMDQMHDELLKLQGESTSINGANTALVSLAE--------EDEWETVG-PKNKSAVT 360
           F+ F++D+ H+E++ L+ ++  ++ A  A  S ++         DEW  VG  KNK+ VT
Sbjct: 363 FVHFLVDRAHEEMVALR-KAHGLDEAQHAQGSASDGGAQNGDDADEWAQVGRKKNKATVT 421

Query: 361 RTQSFLP-------SALSDIFGGQLKSVVKAQ----GNKASATVQPFLLLHLDIYSEAVH 409
           R Q   P       SA+S IFGG LKS ++ Q      K S T+Q F +LHLDI    + 
Sbjct: 422 R-QVGAPAGDASSRSAVSAIFGGLLKSTIRFQPPHGHYKPSTTIQSFNMLHLDIAGNEIS 480

Query: 410 TIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ---- 465
           ++EDALR  S PE++E Y+    G + ++  KK V++  L + L+LHL RF+Y +     
Sbjct: 481 SLEDALRHHSVPESIE-YKPD--GASEMLPVKKDVRLYRLPECLVLHLKRFTYSATAGGH 537

Query: 466 --GSTKLHKSVRFPLQLVLGRDLLV 488
             G +KLHK V F   L L   +L 
Sbjct: 538 GGGYSKLHKMVAFGNSLRLDSKVLA 562



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 2/69 (2%)

Query: 190 NEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR--TRDIPKAGYPTLT 247
            E  +S   L PRGL+N+GN CF+NATLQAL++C PF  +L  L      +  A  PTL 
Sbjct: 119 GEQAESQSLLQPRGLVNTGNTCFINATLQALIACRPFASVLSRLPGVVPLLEPAKCPTLY 178

Query: 248 AFVGFVSDF 256
               F S+ 
Sbjct: 179 GLAQFASEM 187


>gi|354543189|emb|CCE39907.1| hypothetical protein CPAR2_603260 [Candida parapsilosis]
          Length = 907

 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 159/328 (48%), Gaps = 62/328 (18%)

Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPTLTAFVGF 252
           V D+ P+GL N+GN+CF+N+ LQ+L+ C PF +LL+ + T+   D+ ++  P + A +  
Sbjct: 525 VFDIKPKGLTNTGNICFMNSILQSLLYCKPFNKLLKLIETKSIGDLVESSQPLIDATIKL 584

Query: 253 VSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
            ++F      S  K  +S+     PF  ++  +  K F     +   G  +QEDA+EFL 
Sbjct: 585 FNEF----KPSDNKLPVSI----EPFYSAL--SKHKKFQ----HLKWG--QQEDAEEFLG 628

Query: 313 FIMDQMHDELLKLQGESTSINGANTALVSLAEED-------------------------- 346
           + +D +++E++ L  +  +    +  + S  ++D                          
Sbjct: 629 YYLDALNEEMI-LALKKLNTPQVDQLIQSYTQDDVAKFKYNVKTCIRKIKKDDDQEDEEN 687

Query: 347 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV---KAQGN-KASATVQPFLLLHLD 402
           EW  VGPK    +T+ +   P+ L+ IF G+ KSV+   K   N + S T+ PF  + LD
Sbjct: 688 EWNEVGPKKN--ITKIE-VDPTPLNMIFSGEFKSVITIPKPSSNFQKSITLDPFQHVQLD 744

Query: 403 IYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 462
           I +   ++IE+A    +  E +  Y+     N   V  KK   I+ L ++LI+HL RFSY
Sbjct: 745 ISNS--NSIEEAFLHLNELETI-SYK---GNNNKEVEVKKQTFIERLPQVLIIHLKRFSY 798

Query: 463 GSQGST---KLHKSVRFPLQLVLGRDLL 487
                    KL K++ +   L +  ++L
Sbjct: 799 SKDQENAIEKLAKNISYDHTLTIPNEIL 826


>gi|403216729|emb|CCK71225.1| hypothetical protein KNAG_0G01670 [Kazachstania naganishii CBS
           8797]
          Length = 897

 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 152/358 (42%), Gaps = 93/358 (25%)

Query: 181 SKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK 240
           SK + M+  N PVKS+   +PRG++N+ N+CF+++ LQ L+ C PFV +L  L TR+ P 
Sbjct: 428 SKSIDMRT-NLPVKSI---IPRGIVNTANICFMSSVLQVLLHCKPFVDILNVLSTRN-PN 482

Query: 241 AGYPTLT-----AFVGFVSDFD------------------TPSGGSSKKKNISVLDIGRP 277
           +    ++     A     S+FD                   P+GG      I    +   
Sbjct: 483 SKTGAMSCKLTDALTTLYSEFDRENFEEEKREIEAKTKPAVPTGGK-----IPYAAVSDA 537

Query: 278 FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF-----------------------I 314
             P  F  +L    P   +   G   QEDA+EFL+                        I
Sbjct: 538 IKPDSFYMILSKI-PKFKDLQWG--HQEDAEEFLTHLLDQLEEELLAAIECLSENEIQNI 594

Query: 315 MDQMHDELLKL--------QGESTSINGANTALVSLAEE--------------DEWETVG 352
           +  ++DE LK+           +  +   + +L SL E               D W  V 
Sbjct: 595 LQSINDENLKIFFIRNLARYKNADFMKNISFSLKSLIERYGTINDDENDENDGDGWHEVS 654

Query: 353 PKNKS------AVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIY 404
             +K       A  RT   +PS +S +FGGQ +SV+    NK S   T+ PF  + LDI 
Sbjct: 655 STSKKGKKTKMAAKRTVEVVPSPISSLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDIS 714

Query: 405 SEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 462
            E V+ +E A + FS  E L  ++ S   N   V AKK   I  L ++L++ L RFS+
Sbjct: 715 DEEVNDLESAFKKFSEFEFLP-FKGS---NGQDVQAKKQTFIDKLPQVLLIQLKRFSF 768


>gi|254578874|ref|XP_002495423.1| ZYRO0B11044p [Zygosaccharomyces rouxii]
 gi|238938313|emb|CAR26490.1| ZYRO0B11044p [Zygosaccharomyces rouxii]
          Length = 826

 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 143/342 (41%), Gaps = 83/342 (24%)

Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPT----LTAFVG 251
           VK + PRG++N  N+CF+++ LQ L+ C PF+ +L  +  R++     P     L A + 
Sbjct: 373 VKSVAPRGIVNRANVCFMSSVLQVLLYCRPFINILNVVSVRNVVARAGPIQSKLLDACLN 432

Query: 252 FVSDFDTPS--------------------GGSSKKKNISVLDIGRPFSPSMFEAVLKNFT 291
               FD  +                     GS ++ N+ V  I     P  F   L    
Sbjct: 433 IYKQFDKDTVELEKKNAAKNGSGNNSNVGSGSIRQSNV-VSSISEAIKPDEFYEALSTI- 490

Query: 292 PDVPNSISGRPRQEDAQEFLSFIMDQMHDELL---------KLQGESTSIN--------- 333
           P   +   G   QEDA+EFL+ ++DQ+H+E +         ++     SIN         
Sbjct: 491 PKFKDLKWGH--QEDAEEFLTHLLDQLHEEFISSICSLGDNEILNLLQSINDEELRIFFV 548

Query: 334 ----------------GANTALVSL---------AEEDEWETVGPKNKSAVT------RT 362
                           G    L+S           E D W  V   +K          RT
Sbjct: 549 RNLPRYKKAEFLKSSPGQLKDLISTYGTVSEDNDEEGDGWHEVSGSSKKGKKTKTAAKRT 608

Query: 363 QSFLPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
               PS +S +FGGQ +SV+    NK S   T+ PF  + LDI  ++V+ +E A + FS 
Sbjct: 609 VEMEPSPMSCLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDKSVNDLETAFKKFSE 668

Query: 421 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 462
            E L  +++SS  +   V AKK   I  L ++L++ L RF +
Sbjct: 669 YE-LLPFKSSSGYD---VEAKKQTFIDRLPQVLLIQLKRFQF 706


>gi|358341643|dbj|GAA49264.1| ubiquitin carboxyl-terminal hydrolase 2 [Clonorchis sinensis]
          Length = 655

 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 128/282 (45%), Gaps = 31/282 (10%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPT---LTAFVGFVSDFDT 258
           GL N GN CF+N+ +Q L +  P ++  + E    D+ K+        TA+   +++   
Sbjct: 320 GLNNLGNTCFMNSIIQCLSNTHPLLEYCISERYVNDLNKSSTMRGNLFTAYASLMNELWD 379

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P    S              SP  F+  ++ F P           Q+D+QEFL ++++ +
Sbjct: 380 PEMFESST------------SPMQFKTQIQRFAPRFVGY-----SQQDSQEFLRYVLEGL 422

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++      +     A   LA+ D       K      R  S   SA+ D+F GQL
Sbjct: 423 HNEVNRVTKRPHPVTPDYAAEDKLADRD-------KADLYWKRYLSMDNSAIVDLFVGQL 475

Query: 379 KSVVK-AQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV 437
            S ++ A+    S T  PF  L L I  +A   I D LRLF++ E+L+G+     G   V
Sbjct: 476 MSTLECAECGFKSTTFDPFWDLSLPIPKKANVNIMDCLRLFTSKEDLDGHERPMCGRCKV 535

Query: 438 -VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
                K   +Q   +IL+LHL RFS G +  +K+   V +PL
Sbjct: 536 RRRCTKHFSLQKFPRILVLHLKRFS-GERFRSKMSVLVDYPL 576


>gi|145545853|ref|XP_001458610.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124426431|emb|CAK91213.1| unnamed protein product [Paramecium tetraurelia]
          Length = 503

 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 135/295 (45%), Gaps = 23/295 (7%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CFLN+++QAL +  P     + +L  ++I       L++    V  F     
Sbjct: 69  GLTNLGNTCFLNSSIQALSNTQPLTDYFMSQLHIKEINPEN--PLSSQGNIVKSFAQLIR 126

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
              +K +    D  +   P+ F + + N+ P     I     QEDA EF++F++D +H++
Sbjct: 127 LLWQKVDQYQYDDMKVLKPTQFISTVGNYNP-----IFAEGTQEDAHEFIAFLLDMIHED 181

Query: 322 LLKLQGESTSINGANTALVSLAEED-EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
           L +++ +        T   +  + D EW+    +N+S +            D+F GQ+  
Sbjct: 182 LNRIKKKPYVEQAKFTKFPTNEDADAEWKKYLSRNQSIIV-----------DLFQGQMLD 230

Query: 381 VVKAQGNKAS-ATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT 439
            +     K+S    +PF+ L + + +     +++ +  F   E L+G    +  N     
Sbjct: 231 TLSCLTCKSSRYCFEPFMYLSVPVLNRECE-LQECIEEFLKKETLKGDEGWNCTNCNQRR 289

Query: 440 -AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 493
            + K + + ++  ILI+HL RF + SQ   K+   V++PLQ +   +L+ T   E
Sbjct: 290 DSNKKIDLWSMPNILIIHLKRFKFNSQFRAKIRSLVKYPLQNLSFENLVCTKQVE 344


>gi|156847299|ref|XP_001646534.1| hypothetical protein Kpol_1055p31 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117212|gb|EDO18676.1| hypothetical protein Kpol_1055p31 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 822

 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 150/343 (43%), Gaps = 76/343 (22%)

Query: 190 NEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPT 245
           NE +  +  ++PRG++N  N+CF+++ LQ L+ C PF+ +L    TR+    +       
Sbjct: 365 NESILPIGSIIPRGIVNRANICFMSSVLQVLLYCRPFISVLNIASTRNSYSKVNSNSSKL 424

Query: 246 LTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTP--------DVPNS 297
           L A V     FD  +    K+ + +          ++ E  + NF P        D    
Sbjct: 425 LDACVTIYKQFDKQTYQKEKENDKNKDKKSN--GKAVEEKPMNNFAPASDAINPDDFYKI 482

Query: 298 ISGRPR--------QEDAQEFLSFIMDQMHDEL--------------------------- 322
           +S  P+        QEDA+EFL+ ++DQ+H+E                            
Sbjct: 483 LSTLPKFKDLQWGHQEDAEEFLTHLLDQLHEEFICSINSLTDNEILNIVQSISDEELKVF 542

Query: 323 ----LKLQGESTSINGANTALVSLA--------EEDE---WETV------GPKNKSAVTR 361
               L    ++  +  A+  L SL         ++DE   W  V      G K K+A  R
Sbjct: 543 FVRNLPQYKKADFMKNASYQLKSLISKYGPMSDDDDETNGWHEVSSTSKKGKKTKTAAKR 602

Query: 362 TQSFLPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFS 419
           T     S +S++FGGQ +SV+    NK S   T+ PF  + LDI   ++  +E A + FS
Sbjct: 603 TVEIEQSPISNLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDSSIDDLETAFKKFS 662

Query: 420 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 462
             E L  +++SS  +   V AKK   I  L ++L++ L RFS+
Sbjct: 663 EYE-LLPFKSSSGSD---VEAKKQTFIDKLPQVLLVQLKRFSF 701


>gi|313242252|emb|CBY34415.1| unnamed protein product [Oikopleura dioica]
          Length = 927

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 131/288 (45%), Gaps = 47/288 (16%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++N+ +Q+L S +P V+  L +    DI K  +       G V++      
Sbjct: 586 GLKNLGNTCYMNSIIQSLGSLAPLVEKFLTDKYRADINKKNF---LGHKGLVAE------ 636

Query: 262 GSSKKKNISVLDIG------RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
                 + +V+  G      + F P MF+  L +  P     I G  +Q+DAQE L F++
Sbjct: 637 ------HFAVVAKGLWHGGFKNFQPRMFKEALASCNP-----IFGNYKQQDAQELLIFLL 685

Query: 316 DQMHDELLKLQG----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 371
           D +H++L K++     E    +G    LV+   ++ WE     NKS +            
Sbjct: 686 DGLHEDLNKVKDRRYIEEKDADGRPDQLVA---DESWENHTRLNKSIIV----------- 731

Query: 372 DIFGGQLKSVVKAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRT 429
           D+F GQ K+ +K    K  S     F+ L L I +    T+E  L LF   E L G  R 
Sbjct: 732 DLFQGQFKATIKCLSCKFTSVKFDAFMFLSLPIPTSGKATLESCLNLFQQTEKLTGDDRW 791

Query: 430 SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 477
           +         A++++++  +  +LI+HL RF    +  +K+  ++ +P
Sbjct: 792 TCPKCKRARDAERTLRLWRMPTLLIIHLKRFKSDGRWKSKVSTNISYP 839


>gi|3800764|gb|AAC68865.1| ubiquitin specific protease 66 [Gallus gallus]
          Length = 587

 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 126/287 (43%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDI---PKAGYPTLTAFVGFVSDFDT 258
           GL N GN CF+N+ LQ L +        LQ    RD+    +   P ++ F   +    T
Sbjct: 47  GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTPLMSEFAKLIQLLWT 106

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
            S       N SV       SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 107 SS------PNDSV-------SPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 148

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H E+ ++         AN   +    +DE      K++    R Q    S +SD+F GQL
Sbjct: 149 HGEVNRVLVRPR----ANADTLDHLPDDE------KSRQMWRRYQEREDSRVSDLFVGQL 198

Query: 379 KS-VVKAQGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
           KS +  ++    S    PF  L L I    Y E   T+ D LRLF+  + L+G    +  
Sbjct: 199 KSSLTCSECGYCSTAFDPFWDLSLPIPKKGYGEV--TLMDCLRLFTKEDVLDGDEKPTCC 256

Query: 434 NAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                T   K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 257 RCKARTRCTKKFSIQKFPKILVLHLKRFSEARIRASKLTTFVNFPLK 303


>gi|414887985|tpg|DAA63999.1| TPA: hypothetical protein ZEAMMB73_048281 [Zea mays]
          Length = 245

 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/263 (33%), Positives = 117/263 (44%), Gaps = 48/263 (18%)

Query: 5   KLFVFGSFTEEETRSWLQSQSSGSVKKPVSSRRAEKPAEDKELQFGSLNFGTESSLVGTT 64
           K+ +FGSFTE+ET+  LQ Q   S  K VS     K  E  E+QFG+LN           
Sbjct: 7   KMLLFGSFTEDETK-LLQGQPLKSPTKSVS-----KECERTEIQFGTLNLSVL------- 53

Query: 65  DEPNGKSVVDGPVVFQPSTLLKKDDKVKSVGASNDHDLGAVGCPKENGHIKNSTNGPALS 124
              N + +    VV    +   +   +    A N+    A G    NG       GP L+
Sbjct: 54  ---NLEKISTSSVVLPAKSAKGETSAITKENACNNEK-KAAGSSLSNG-------GPVLA 102

Query: 125 NG---VNHLKADGIDFSSFHQNA--------GGHANPSPISKFHVLCDGN--IDGRDQNA 171
           NG   VN    +G+ F +    A           +NP+P        DG    + R  N 
Sbjct: 103 NGCPPVNVPANNGL-FENVKTEAVVPPVIPVKIISNPTPQMTLETHKDGTKPTESRKLNK 161

Query: 172 A---ACNSS-------ISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALM 221
                 N S       ++   E  + ++N+       LLP GL N+GN+CFLNATLQAL+
Sbjct: 162 EREITENGSPIVDKHIVAAPAEEAVTSLNKKASQNMPLLPHGLRNTGNICFLNATLQALL 221

Query: 222 SCSPFVQLLQELRTRDIPKAGYP 244
           SCSPFV LLQ+LR R IPK   P
Sbjct: 222 SCSPFVYLLQDLRNRRIPKVHVP 244


>gi|260836461|ref|XP_002613224.1| hypothetical protein BRAFLDRAFT_210578 [Branchiostoma floridae]
 gi|229298609|gb|EEN69233.1| hypothetical protein BRAFLDRAFT_210578 [Branchiostoma floridae]
          Length = 346

 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 135/286 (47%), Gaps = 40/286 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL N GN CF+N+ LQ L   S   QL           A Y     ++  + D ++   G
Sbjct: 7   GLRNLGNTCFMNSILQCL---SHTKQL-----------ADYCMNENYIFDLKDSNSSMKG 52

Query: 263 SSKKKNISVL-DIGR----PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
           +  K   +++  + R      SPS F+A ++ F P           Q+D+QEFL F+++ 
Sbjct: 53  ALMKAFANLIRQMWRGSSDAVSPSAFKAQIQKFAPRFVGY-----NQQDSQEFLRFLLEG 107

Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP--SALSDIFG 375
           +HD++ K+Q +            S ++++E E +  + K+     +  L   S ++D+F 
Sbjct: 108 LHDDINKVQVKPKP---------SYSDDEEIEKLSDERKARHAWNKYLLRDNSQITDLFV 158

Query: 376 GQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYR--TSST 432
           GQLKSV++       S T  PF  L L I  ++   + D LR F   E L+G    T S 
Sbjct: 159 GQLKSVLQCTHCQHCSVTFDPFWDLSLPIPKKSSIDVRDCLRDFVEEEILDGDEKPTCSK 218

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
             A     K+   +Q L KIL+LHL RFS G +   KL  +V FPL
Sbjct: 219 CKARRKCTKRFF-LQRLPKILVLHLKRFS-GMRYRQKLSTTVNFPL 262


>gi|50252264|dbj|BAD28270.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
          Length = 919

 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 122/288 (42%), Gaps = 54/288 (18%)

Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVGFVS 254
           V+ + PRGL N GN C+ NA LQ LM   P  + LL  L ++D     +  +     + S
Sbjct: 379 VRGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCCSKNWCLMCELEQYAS 438

Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
                          ++ + G P SPS   + L+N    +     G   QEDA EFL  +
Sbjct: 439 ---------------TLRESGGPVSPSRILSNLRNIGCRL-----GGGSQEDAHEFLRHL 478

Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
           +  M    L        + G      SL E                       + +  +F
Sbjct: 479 VMSMQGACLD------GLGGEKQVEASLQET----------------------TLIQQMF 510

Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
           GG+LKS VK  +    S   +  + L L+I+   V +++DAL  F+APE+L+G      G
Sbjct: 511 GGRLKSKVKCLRCYHESERYENIMDLTLEIHG-WVESLQDALTQFTAPEDLDGENMYKCG 569

Query: 434 N-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
             +  V A+K + +  +  IL + L RF  G  G  K++K V FP  L
Sbjct: 570 RCSAYVKARKQLSVHEVPNILTVVLKRFQTGKYG--KINKCVTFPDML 615


>gi|118359579|ref|XP_001013029.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
           thermophila]
 gi|89294796|gb|EAR92784.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
           thermophila SB210]
          Length = 528

 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 126/292 (43%), Gaps = 45/292 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQ-----ELRTRDIPKAGYPTLTAFVGFVSDF 256
           GLIN GN CF+N+ LQ L +  P     LQ     E+  ++   +G   + AF   V   
Sbjct: 168 GLINLGNTCFMNSALQCLSNLQPLTDYCLQNKEDNEINIQNPMGSGGVVIKAFANLVRQI 227

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
                 S               SP  F  V+  F     N I    RQ+D+QEFL +++D
Sbjct: 228 WNQKEDS--------------VSPDEFLRVISYF-----NKIYSSGRQQDSQEFLLYLLD 268

Query: 317 QMHDELLKLQG-----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 371
           Q+H++L +++      +       N   +     D W     +NKS +            
Sbjct: 269 QIHEDLNRVEKKPYVEQKEYFKNLNQKELEKLAADSWGDYLKRNKSVIV----------- 317

Query: 372 DIFGGQLKSVVKAQGNK-ASATVQPFLLLHLDIYSEAVH--TIEDALRLFSAPENLEG-Y 427
           D+F GQLK+ +K    K A    +PF+ L + I  +A +   I+D +  F+  E L+G  
Sbjct: 318 DLFQGQLKNTLKCLKCKTAKYQFEPFMYLTVPIPQKAENEINIQDCIEQFTEKEILDGDE 377

Query: 428 RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
           +           ++K + +  L  IL++ + RF Y +Q   K+   V+FP+Q
Sbjct: 378 KWFCPECKDFQKSEKKIDLWKLPPILMICMKRFQYTAQSKKKITTKVQFPVQ 429


>gi|218190388|gb|EEC72815.1| hypothetical protein OsI_06524 [Oryza sativa Indica Group]
          Length = 808

 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 122/288 (42%), Gaps = 54/288 (18%)

Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVGFVS 254
           V+ + PRGL N GN C+ NA LQ LM   P  + LL  L ++D     +  +     + S
Sbjct: 268 VRGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCCSKNWCLMCELEQYAS 327

Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
                          ++ + G P SPS   + L+N    +     G   QEDA EFL  +
Sbjct: 328 ---------------TLRESGGPVSPSRILSNLRNIGCRL-----GGGSQEDAHEFLRHL 367

Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
           +  M    L        + G      SL E                       + +  +F
Sbjct: 368 VMSMQGACLD------GLGGEKQVEASLQET----------------------TLIQQMF 399

Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
           GG+LKS VK  +    S   +  + L L+I+   V +++DAL  F+APE+L+G      G
Sbjct: 400 GGRLKSKVKCLRCYHESERYENIMDLTLEIHG-WVESLQDALTQFTAPEDLDGENMYKCG 458

Query: 434 N-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
             +  V A+K + +  +  IL + L RF  G  G  K++K V FP  L
Sbjct: 459 RCSAYVKARKQLSVHEVPNILTVVLKRFQTGKYG--KINKCVTFPDML 504


>gi|326510035|dbj|BAJ87234.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 979

 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 122/288 (42%), Gaps = 54/288 (18%)

Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVGFVS 254
           V+ + PRGL N GN C+ NA LQ LM   P  + LL  L ++D     +  +     + S
Sbjct: 437 VRGISPRGLFNCGNSCYANAVLQCLMCTKPLMIHLLLRLHSKDCCSKNWCLMCELEQYAS 496

Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
                          ++ + G P SPS   + L+N    +     G   QEDA EFL  +
Sbjct: 497 ---------------TLRESGGPVSPSRILSNLRNIGCRL-----GGGSQEDAHEFLRHL 536

Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
           +  M    L        + G      SL E                       + +  +F
Sbjct: 537 VMSMQAACLD------GLGGEKQVEQSLQET----------------------TLIQQMF 568

Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
           GG+LKS VK  + +  S   +  + L L+I+   V +++DAL  F+APE+L+G      G
Sbjct: 569 GGRLKSKVKCLRCHHESERYENIMDLTLEIHG-WVESLQDALTQFTAPEDLDGDNMYKCG 627

Query: 434 N-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
                V A+K + +  +  IL + L RF  G  G  K++K V FP  L
Sbjct: 628 RCCAYVKARKQLSVHEVPNILTVVLKRFQTGKYG--KINKCVTFPDML 673


>gi|115445271|ref|NP_001046415.1| Os02g0244300 [Oryza sativa Japonica Group]
 gi|113535946|dbj|BAF08329.1| Os02g0244300 [Oryza sativa Japonica Group]
          Length = 975

 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 122/288 (42%), Gaps = 54/288 (18%)

Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVGFVS 254
           V+ + PRGL N GN C+ NA LQ LM   P  + LL  L ++D     +  +     + S
Sbjct: 435 VRGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCCSKNWCLMCELEQYAS 494

Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
                          ++ + G P SPS   + L+N    +     G   QEDA EFL  +
Sbjct: 495 ---------------TLRESGGPVSPSRILSNLRNIGCRL-----GGGSQEDAHEFLRHL 534

Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
           +  M    L        + G      SL E                       + +  +F
Sbjct: 535 VMSMQGACLD------GLGGEKQVEASLQET----------------------TLIQQMF 566

Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
           GG+LKS VK  +    S   +  + L L+I+   V +++DAL  F+APE+L+G      G
Sbjct: 567 GGRLKSKVKCLRCYHESERYENIMDLTLEIHG-WVESLQDALTQFTAPEDLDGENMYKCG 625

Query: 434 N-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
             +  V A+K + +  +  IL + L RF  G  G  K++K V FP  L
Sbjct: 626 RCSAYVKARKQLSVHEVPNILTVVLKRFQTGKYG--KINKCVTFPDML 671


>gi|297850108|ref|XP_002892935.1| ubiquitin-specific protease 15 [Arabidopsis lyrata subsp. lyrata]
 gi|297338777|gb|EFH69194.1| ubiquitin-specific protease 15 [Arabidopsis lyrata subsp. lyrata]
          Length = 926

 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 125/290 (43%), Gaps = 58/290 (20%)

Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVS 254
           V DL PRGL+N GN C+ NA LQ+L    P V  LL+   +R      +  +      V 
Sbjct: 436 VFDLSPRGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSGKDWCLMCELEQHV- 494

Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
                         + + + G P S S   + +++    +     G   QEDA EFL  +
Sbjct: 495 --------------MMLRESGGPLSASRILSHMRSINCQI-----GDGSQEDAHEFLRLL 535

Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
           +  M    L+  G  T ++                   P+ +           + +  +F
Sbjct: 536 VASMQSICLERLGGETKVD-------------------PRLQET---------TLVQHMF 567

Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTS 430
           GG+L+S VK  + +  S   +  + L L+IY   V +++DAL  F+ PE+L+G   YR S
Sbjct: 568 GGRLRSKVKCLRCDHESERYENIMDLTLEIYG-WVESLQDALTQFTRPEDLDGENMYRCS 626

Query: 431 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
               AG V A+K + I     IL + L RF  G  G  K++K + FP  L
Sbjct: 627 RC--AGYVRARKELSIHEAPNILTIVLKRFQEGRYG--KINKCISFPEML 672


>gi|326427127|gb|EGD72697.1| hypothetical protein PTSG_04426 [Salpingoeca sp. ATCC 50818]
          Length = 1574

 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 128/293 (43%), Gaps = 33/293 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
            GL N GN C++NA LQ L           + R R+            +   S F      
Sbjct: 1241 GLKNLGNTCYMNAVLQCLAHTKQLATYFVQKRYRN-----------HLNRRSKFGCKGEV 1289

Query: 263  SSKKKNISVLDIGRPF---SPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
            + +   +  +   R +   SPSMF+ V  ++ P           Q+D QEF S ++D++H
Sbjct: 1290 AEELAELLTVLTSRQYRHLSPSMFKEVFASYCPQFAGY-----DQQDCQEFASMLLDKLH 1344

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L ++  +  + +   + + ++ A  + W       K  + R  S +    +D+F GQ 
Sbjct: 1345 EDLNRVVAKPPAKDLDLSGMDAVRAGNEAW-------KQCIARDNSII----TDLFQGQF 1393

Query: 379  KSVVKAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV 437
            +SV +    +  SAT  PF  L L +     +++   +RLFS  EN+ G           
Sbjct: 1394 RSVTRCNTCRYESATYSPFTSLSLPVPPHGRYSLHHCIRLFSRQENMTGNNQWKCPKCKA 1453

Query: 438  VT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVT 489
               A K + I  L + L++HL RF +      K++  + FP  L LG+D +++
Sbjct: 1454 YRDAIKFMGIWRLPRCLLIHLKRFYFNGPFRDKINTMIDFPQNLQLGKDDVMS 1506


>gi|224116680|ref|XP_002317364.1| predicted protein [Populus trichocarpa]
 gi|222860429|gb|EEE97976.1| predicted protein [Populus trichocarpa]
          Length = 777

 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 120/289 (41%), Gaps = 56/289 (19%)

Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVGFVS 254
           V DL PRGL+N GN C+ NA LQ L    P  V LL    +R   +  +  +      V 
Sbjct: 375 VIDLTPRGLVNCGNSCYANAVLQCLTCTKPLIVFLLHRSHSRACCEIDWCLMCELEQHV- 433

Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
                         + + + G P SPS     ++N    +     G   QEDA EFL  +
Sbjct: 434 --------------MMLRECGGPLSPSRILLHMRNINHQI-----GDGSQEDAHEFLRLL 474

Query: 315 MDQMHDELL-KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 373
           +  M    L KL GE                    + V P+ +           + +   
Sbjct: 475 IASMQSICLEKLGGE--------------------DKVDPRLQET---------TFIQHT 505

Query: 374 FGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSST 432
           FGG+L+S VK  + +  S   +  + L L+I+   V ++EDAL  F+ PE L+G      
Sbjct: 506 FGGRLRSKVKCLRCHHESERYENIMDLTLEIFG-WVKSLEDALTQFTTPEELDGENMYRC 564

Query: 433 GN-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
           G  A  V A+K + I     IL + L RF  G  G  K++K + FP  L
Sbjct: 565 GRCAAYVRARKQLSIHEAPNILTIVLKRFQEGKYG--KINKCITFPDML 611


>gi|18394440|ref|NP_564014.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabidopsis thaliana]
 gi|166201354|sp|Q9FPS9.2|UBP15_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 15; AltName:
           Full=Deubiquitinating enzyme 15; Short=AtUBP15; AltName:
           Full=Ubiquitin thioesterase 15; AltName:
           Full=Ubiquitin-specific-processing protease 15
 gi|332191421|gb|AEE29542.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabidopsis thaliana]
          Length = 924

 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 125/290 (43%), Gaps = 58/290 (20%)

Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVS 254
           V DL PRGL+N GN C+ NA LQ+L    P V  LL+   +R      +  +      V 
Sbjct: 432 VFDLSPRGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSGKDWCLMCELEQHV- 490

Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
                         + + + G P S S   + +++    +     G   QEDA EFL  +
Sbjct: 491 --------------MMLRESGGPLSASRILSHMRSINCQI-----GDGSQEDAHEFLRLL 531

Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
           +  M    L+  G  T ++                   P+ +           + +  +F
Sbjct: 532 VASMQSICLERLGGETKVD-------------------PRLQET---------TLVQHMF 563

Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTS 430
           GG+L+S VK  + +  S   +  + L L+IY   V +++DAL  F+ PE+L+G   YR S
Sbjct: 564 GGRLRSKVKCLRCDHESERYENIMDLTLEIYG-WVESLQDALTQFTRPEDLDGENMYRCS 622

Query: 431 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
               AG V A+K + I     IL + L RF  G  G  K++K + FP  L
Sbjct: 623 RC--AGYVRARKELSIHEAPNILTIVLKRFQEGRYG--KINKCISFPEML 668


>gi|334182643|ref|NP_001185019.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabidopsis thaliana]
 gi|332191422|gb|AEE29543.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabidopsis thaliana]
          Length = 928

 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 125/290 (43%), Gaps = 58/290 (20%)

Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVS 254
           V DL PRGL+N GN C+ NA LQ+L    P V  LL+   +R      +  +      V 
Sbjct: 436 VFDLSPRGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSGKDWCLMCELEQHV- 494

Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
                         + + + G P S S   + +++    +     G   QEDA EFL  +
Sbjct: 495 --------------MMLRESGGPLSASRILSHMRSINCQI-----GDGSQEDAHEFLRLL 535

Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
           +  M    L+  G  T ++                   P+ +           + +  +F
Sbjct: 536 VASMQSICLERLGGETKVD-------------------PRLQET---------TLVQHMF 567

Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTS 430
           GG+L+S VK  + +  S   +  + L L+IY   V +++DAL  F+ PE+L+G   YR S
Sbjct: 568 GGRLRSKVKCLRCDHESERYENIMDLTLEIYG-WVESLQDALTQFTRPEDLDGENMYRCS 626

Query: 431 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
               AG V A+K + I     IL + L RF  G  G  K++K + FP  L
Sbjct: 627 RC--AGYVRARKELSIHEAPNILTIVLKRFQEGRYG--KINKCISFPEML 672


>gi|403334902|gb|EJY66621.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
          Length = 716

 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 136/304 (44%), Gaps = 44/304 (14%)

Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR-TRDIPKAGYPT--LTAFVGFVS 254
           D L +GL N+ N CF+N  LQ+L+S   F  +L  +   +++ K   P   L  FV ++S
Sbjct: 366 DKLNKGLTNTTNCCFMNVILQSLLSIPAFFNMLVAISDNQEVMKELGPDSLLRKFV-YLS 424

Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPS------MFEAVLKNFTPDVPNSISGRPRQEDAQ 308
            +  P         +  +D   PF+ +      +F  + +NF P            +D  
Sbjct: 425 MYFNP---------MLQMDRKSPFAANPVDAEKIFAELNQNFNP--------HQEHQDCH 467

Query: 309 EFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAV--TRTQSFL 366
           EFL+ ++D +HDE LKL      +      +      DEW+ VG KN         Q   
Sbjct: 468 EFLAMLLDLLHDE-LKLIYVPPDVKDKEAVV------DEWQEVGNKNSKCKFNNDQQQIS 520

Query: 367 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
            S ++DIFGG +++  +  +    S T +PF  L+L++      ++E+ L  F   + + 
Sbjct: 521 QSLINDIFGGIVRNEFQIDRSTNVSVTFEPFFFLNLEV--NRSESLEECLNNFFRSKIIN 578

Query: 426 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRD 485
            Y+        +V A    +I+ L  ILIL L RF Y   G  K+ + + FP  L +  +
Sbjct: 579 DYKLE----GKIVRATHQQQIEKLPNILILQLKRFVY-RDGPVKIGEFIEFPEVLRIEDN 633

Query: 486 LLVT 489
            L T
Sbjct: 634 CLST 637


>gi|145551979|ref|XP_001461666.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124429501|emb|CAK94293.1| unnamed protein product [Paramecium tetraurelia]
          Length = 484

 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 134/300 (44%), Gaps = 33/300 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CFLN+++QAL +  P     + +L  ++I       L++    V  F     
Sbjct: 50  GLTNLGNTCFLNSSIQALSNTQPLTDYFMSQLHVKEINPDN--PLSSQGNIVQSFAQLIR 107

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
              +K +   L+  +   P+ F + + N+ P     I     QEDA EF++F++D +H++
Sbjct: 108 LLWQKVDQYTLEEIQALKPTQFISTIGNYNP-----IFAEGTQEDAHEFIAFLLDMIHED 162

Query: 322 LLKLQGESTSINGANTALVSLAEED----EWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
           L +++ +        T    L   D    EW     +N+S +            D+F G 
Sbjct: 163 LNRIKKKPYV---EQTKFTKLPTNDDAHQEWTKYLSRNQSIIV-----------DLFQGH 208

Query: 378 LKSVVKAQGNKAS-ATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTG 433
           +   +     K+S    +PF+ L + + S     +E  +  F   E L   EG+  + T 
Sbjct: 209 MLDTLSCLTCKSSRYCFEPFMYLSVPVLSRECDLLE-CIEEFLKTETLTGDEGW--NCTK 265

Query: 434 NAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 493
            +    + K + + ++  ILI+HL RF + SQ   K+   VR+PLQ +   +L+ T   E
Sbjct: 266 CSQRRDSNKKIDLWSMPNILIIHLKRFKFNSQFRAKIRSLVRYPLQNLSFENLVCTKQIE 325


>gi|449489446|ref|XP_002194208.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Taeniopygia
           guttata]
          Length = 625

 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 125/287 (43%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ    RD+              +S+F     
Sbjct: 288 GLRNLGNTCFMNSILQCLSNSKELRDYCLQNQYLRDLNNNS----RMRTALMSEF----- 338

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I +L    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 339 ----AKLIQLLWTSSPNESVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 389

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H E+ ++         A+T  +    +DE      K++    R Q    S +SD+F GQL
Sbjct: 390 HSEVNRVLVRPR----ASTDSLDHLPDDE------KSRQMWRRYQEREDSRISDLFVGQL 439

Query: 379 KS-VVKAQGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
           KS +  ++    S    PF  L L I    Y E   T+ D LRLF+  + L+G    +  
Sbjct: 440 KSSLTCSECGYCSTAFDPFWDLSLPIPKKGYGEV--TLMDCLRLFTKEDVLDGDEKPTCC 497

Query: 434 NAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                T   K   IQ   KIL+LHL RFS     S+KL   V FPL+
Sbjct: 498 RCKARTRCTKKFSIQKFPKILVLHLKRFSEARIRSSKLTTFVNFPLK 544


>gi|5734755|gb|AAD50020.1|AC007651_15 Unknown protein [Arabidopsis thaliana]
          Length = 891

 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 125/290 (43%), Gaps = 58/290 (20%)

Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVS 254
           V DL PRGL+N GN C+ NA LQ+L    P V  LL+   +R      +  +      V 
Sbjct: 399 VFDLSPRGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSGKDWCLMCELEQHV- 457

Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
                         + + + G P S S   + +++    +     G   QEDA EFL  +
Sbjct: 458 --------------MMLRESGGPLSASRILSHMRSINCQI-----GDGSQEDAHEFLRLL 498

Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
           +  M    L+  G  T ++                   P+ +           + +  +F
Sbjct: 499 VASMQSICLERLGGETKVD-------------------PRLQET---------TLVQHMF 530

Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTS 430
           GG+L+S VK  + +  S   +  + L L+IY   V +++DAL  F+ PE+L+G   YR S
Sbjct: 531 GGRLRSKVKCLRCDHESERYENIMDLTLEIYG-WVESLQDALTQFTRPEDLDGENMYRCS 589

Query: 431 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
               AG V A+K + I     IL + L RF  G  G  K++K + FP  L
Sbjct: 590 RC--AGYVRARKELSIHEAPNILTIVLKRFQEGRYG--KINKCISFPEML 635


>gi|326933314|ref|XP_003212751.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Meleagris
           gallopavo]
          Length = 549

 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 124/287 (43%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ    RD+              +S+F     
Sbjct: 212 GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNS----RMRTALMSEF----- 262

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I +L    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 263 ----AKLIQLLWTSSPNDSVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 313

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H E+ ++         AN   +    +DE      K++    R Q    S +SD+F GQL
Sbjct: 314 HSEVNRVLVRPR----ANADTLDHLPDDE------KSRQMWRRYQEREDSRVSDLFVGQL 363

Query: 379 KS-VVKAQGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
           KS +  ++    S    PF  L L I    Y E   T+ D LRLF+  + L+G    +  
Sbjct: 364 KSSLTCSECGYCSTAFDPFWDLSLPIPKKGYGEV--TLMDCLRLFTKEDVLDGDEKPTCC 421

Query: 434 NAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                T   K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 422 RCKARTRCTKKFSIQKFPKILVLHLKRFSEARIRASKLSTFVNFPLK 468


>gi|241628902|ref|XP_002410027.1| ubiquitin-specific protease, putative [Ixodes scapularis]
 gi|215503290|gb|EEC12784.1| ubiquitin-specific protease, putative [Ixodes scapularis]
          Length = 340

 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 126/283 (44%), Gaps = 32/283 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTA-FVGFVSDFDTPS 260
           GL N GN CF+N+ +Q L    P ++  L++  T +I         A F  F +   +  
Sbjct: 2   GLRNLGNTCFMNSIVQCLAHTRPLLEYCLKDCYTSEINNITSSNRGALFEAFATLMKSIW 61

Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
             S+ +  IS         P  F + ++ F P           Q+D+QEFL +++  +H+
Sbjct: 62  RSSNGEYAIS---------PQAFRSQIQKFAPRFMGY-----SQQDSQEFLHYLLQGLHE 107

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
           ++ ++      +           E D+  +   K   A  R   F  S + D F GQLKS
Sbjct: 108 DINRITSRPRHVT---------TEIDDNLSDSQKAAEAWKRYLRFDDSKIVDCFVGQLKS 158

Query: 381 VVKAQ--GNKASATVQPFLLLHLDI--YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 436
            +K    G+K S T  PF  L L I   S++V TI+  L LF+  E L+G    +  N  
Sbjct: 159 TLKCSVCGHK-SVTFDPFWDLSLPIPKSSDSV-TIQQCLSLFTKEEVLDGDEKPTCSNCK 216

Query: 437 VVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
                 KS  I    KIL+LHL RFS G +   KL+  V FPL
Sbjct: 217 TRQRCTKSFTIHRCPKILVLHLKRFSPGERFRAKLNTRVEFPL 259


>gi|10720326|sp|O57429.1|UBP2_CHICK RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
           Full=41 kDa ubiquitin-specific protease; AltName:
           Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
           thioesterase 2; AltName:
           Full=Ubiquitin-specific-processing protease 2
 gi|2736064|gb|AAC13729.1| ubiquitin specific protease 41 [Gallus gallus]
          Length = 357

 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 123/287 (42%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDI---PKAGYPTLTAFVGFVSDFDT 258
           GL N GN CF+N+ LQ L +        LQ    RD+    +     ++ F   +    T
Sbjct: 20  GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQLLWT 79

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
            S   S              SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 80  SSPNDS-------------VSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 121

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H E+ ++         AN   +    +DE      K++    R Q    S +SD+F GQL
Sbjct: 122 HGEVNRVLVRPR----ANADTLDHLPDDE------KSRQMWRRYQEREDSRVSDLFVGQL 171

Query: 379 KS-VVKAQGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
           KS +  ++    S    PF  L L I    Y E   T+ D LRLF+  + L+G    +  
Sbjct: 172 KSSLTCSECGYCSTAFDPFWDLSLPIPKKGYGEV--TLMDCLRLFTKEDVLDGDEKPTCC 229

Query: 434 NAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                T   K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 230 RCKARTRCTKKFSIQKFPKILVLHLKRFSEARIRASKLTTFVNFPLK 276


>gi|242064616|ref|XP_002453597.1| hypothetical protein SORBIDRAFT_04g008750 [Sorghum bicolor]
 gi|241933428|gb|EES06573.1| hypothetical protein SORBIDRAFT_04g008750 [Sorghum bicolor]
          Length = 966

 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 121/288 (42%), Gaps = 54/288 (18%)

Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVGFVS 254
            + + PRGL N GN C+ NA LQ LM   P  + LL  L ++D     +  +     + S
Sbjct: 431 ARGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCSSKNWCLMCELEQYAS 490

Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
                          ++ + G P SPS   + L+N    +     G   QEDA EFL  +
Sbjct: 491 ---------------TLRESGGPLSPSRILSNLRNIGCRL-----GGGTQEDAHEFLRHL 530

Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
           +  M    L        + G      SL E                       + +  +F
Sbjct: 531 VMSMQAACLD------GLGGEKHVEPSLQET----------------------TLIQQMF 562

Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
           GG+LKS VK  +    S   +  + L L+I+   V +++DAL  F+APE+L+G      G
Sbjct: 563 GGRLKSKVKCLRCYHESERYENIMDLTLEIHG-WVESLQDALTQFTAPEDLDGDNMYKCG 621

Query: 434 N-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
             +  V A+K + +  +  IL L L RF  G  G  K++K V FP  L
Sbjct: 622 RCSAYVKARKQLSVHEVPNILTLVLKRFQSGKYG--KINKCVTFPDML 667


>gi|402218406|gb|EJT98483.1| cysteine proteinase [Dacryopinax sp. DJM-731 SS1]
          Length = 865

 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 135/311 (43%), Gaps = 61/311 (19%)

Query: 200 LPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG--YPTLTAFVGFVSDFD 257
           +P GL N+GNLCF N  LQ L+ C PF +L+ E+  R     G   P L A V F+    
Sbjct: 462 VPMGLWNTGNLCFANCILQTLVYCGPFYELVTEIGQRIGGAVGGRTPFLDAMVLFLRQIP 521

Query: 258 TPSGGSSKKKNISVLD---IGRPFSPSMFEAVLKN-----FTPD-VPNSISGRPR----- 303
             +     K  +  +D   +G P S +    V+K        PD V N +S  P+     
Sbjct: 522 ITTSPDPWKARLDEVDFPGLGGPASEAAKMEVIKQKESQGMVPDYVYNGLSDYPKSKQIL 581

Query: 304 ---QEDAQEFLSFIMDQMHDE---LLKLQGESTSINGANTALVSL--------------- 342
              QED  EF  F++D + +E   +LK+   + +   A++   S                
Sbjct: 582 KGGQEDVDEFFCFLLDVLEEELLTVLKIFSANPTPASASSTQASFGGKKLTPGKPDDEFE 641

Query: 343 -------------AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKA 389
                        AE+ EW  VG +NK  V+R+     +A++ +F  + ++V +  G K 
Sbjct: 642 VRRPVSPGTAARGAEDGEWTEVGKRNKKVVSRSILAAETAITKLFCLKTRTVDRRPGAKD 701

Query: 390 SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTL 449
           +  ++P   L L +  E +  IE AL  F++ E +EG   S           + V + TL
Sbjct: 702 AVLIEPQQRLSLSVIDEKITNIEQALHAFASVETMEGTNLS-----------RQVMLDTL 750

Query: 450 SKILILHLMRF 460
             +L+L L R+
Sbjct: 751 PPVLVLQLQRW 761


>gi|449666470|ref|XP_002164031.2| PREDICTED: uncharacterized protein LOC100201504 [Hydra
           magnipapillata]
          Length = 995

 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 129/299 (43%), Gaps = 39/299 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL N GN C++N+ +Q L +C+             +P   Y T   +   ++  +T +  
Sbjct: 656 GLKNLGNTCYMNSVIQCL-ACT-------------LPLGKYFTTGMYEKHLNLCNTNAHP 701

Query: 263 SSKKKNISVLDI------GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
               + ++ L I       R  SP  F+  L  F PD     SG  +Q+DA E L F MD
Sbjct: 702 GELARELAFLIIVISAGEYRSVSPIDFKIALGKFAPD----FSGF-KQQDAHELLMFFMD 756

Query: 317 QMHDELLKL-QGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
            +H+++ K+ + E   +   +     +A +  W+     N S +            D+F 
Sbjct: 757 GLHEDVNKIVKKEIIKVKETDNLSDEIAADIAWKDYKLNNDSVIV-----------DLFQ 805

Query: 376 GQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 434
           GQ +S V     NK S T   F  L L + S    T+E+ ++ F+  E + G  +    N
Sbjct: 806 GQFRSTVTCLSCNKRSKTFDAFNCLQLPLPSNQSTTLENCIQTFTKAEKIGGNDSWKCSN 865

Query: 435 AGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 492
                 A K+++I  L  +LI+ L RF +  +   K+  +V FP+Q       +V P +
Sbjct: 866 CKRYREASKTIEIWKLPPVLIIQLKRFHFDGRWHNKIQTTVNFPMQNFNMSKYIVAPQS 924


>gi|256088992|ref|XP_002580603.1| ubiquitin-specific peptidase 2 (C19 family) [Schistosoma mansoni]
          Length = 756

 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 143/321 (44%), Gaps = 41/321 (12%)

Query: 169 QNAAACNSSISGSKEVPMKA-INEPVKSVKDLLPRGLI---NSGNLCFLNATLQALMSCS 224
           +N+  C   +  S   P++A ++ PV S       GL+   N GN CF+N+ LQ L + +
Sbjct: 128 KNSVRC---LDSSLTSPLRATVSLPVNSHHSYHRGGLVGLNNLGNTCFMNSILQCLSNTA 184

Query: 225 PFVQLLQELR-TRDIPKAGYPT---LTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSP 280
           P  +   E R  +DI K+         ++   + +   P   +S              SP
Sbjct: 185 PLTEYCLEDRFLKDINKSSSMNGLLFHSYADLMKEIWDPDMANSST------------SP 232

Query: 281 SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALV 340
           S F++ ++ F P           Q+D+QEFL ++++ +H E+ ++Q     I        
Sbjct: 233 SRFKSQIQRFAPRFMGY-----SQQDSQEFLRYVLEGLHMEVNRVQKRPNPI-------- 279

Query: 341 SLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLL 399
               + E E    K      R  S   S + D+F GQL S ++  + +  S T  PF  L
Sbjct: 280 --KPDYEAEDYNEKANLYWRRYLSMDNSEIVDLFVGQLMSTLECGECSFKSTTFDPFWDL 337

Query: 400 HLDIYSEAVHTIEDALRLFSAPENLEG-YRTSSTGNAGVVTAKKSVKIQTLSKILILHLM 458
            L I  ++  +I D L LF++ E L+G  R   +         KS  IQ   +IL+LHL 
Sbjct: 338 SLPIPKKSNVSILDCLNLFTSKEELDGNERPICSRCKTRRRCAKSFSIQKFPQILVLHLK 397

Query: 459 RFSYGSQGSTKLHKSVRFPLQ 479
           RFS G +  +K+   V +PL+
Sbjct: 398 RFS-GERFRSKMSVMVDYPLR 417


>gi|325186573|emb|CCA21120.1| ubiquitinspecific protease putative [Albugo laibachii Nc14]
          Length = 565

 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 145/320 (45%), Gaps = 53/320 (16%)

Query: 202 RGLINSGNLCFLNATLQALMSCSPFVQLL-----QELRTRDIPKAG--YPTLTAFVGFVS 254
           RGL+N GN CF N  +Q+LM+CSPF+ L      Q    +++  +   +      V F  
Sbjct: 117 RGLVNQGNTCFQNVIMQSLMACSPFLNLFISISRQVASNKELLSSSNTFRAWKYMVAFTR 176

Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS-GRPRQEDAQEFLSF 313
           +F+ PS    +  + S LD     S ++    ++ +  +V +++   R  +EDA EFL F
Sbjct: 177 EFEEPSLMQLRAIS-SYLDNDERTSKAI---RIRGYFMEVLSALQKSRGDEEDALEFLEF 232

Query: 314 IMDQMHDEL----LKLQGESTS---INGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
            +D +H E     L+L    T    +      + ++  +D W  +G K K++  R  SF 
Sbjct: 233 FLDYLHSEYVTSGLRLPAVCTRNVGMQAKENEVSTIESDDGWAEIGKKGKTSTIRQTSFD 292

Query: 367 PSA--LSDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDI-------------------- 403
            S   ++ +F G L+S ++  G K  S  ++ F  LHL++                    
Sbjct: 293 SSVSPINWLFRGSLRSELQQAGKKQNSINIEAFHCLHLNLDHQEGAQMAIPGNQHGVGPG 352

Query: 404 --YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 461
               E+V   E  L  FS     E +    +   G+   K+  ++++L  +L L++ RF+
Sbjct: 353 ASKKESVKLEEMILETFS-----EEFLDDDSNPGGM---KRLTRMESLPIVLTLNIKRFT 404

Query: 462 YGSQ-GSTKLHKSVRFPLQL 480
           Y  + G  KL + V++P + 
Sbjct: 405 YDPKLGPVKLQQFVKYPAKF 424


>gi|387019607|gb|AFJ51921.1| Ubiquitin carboxyl-terminal hydrolase 21 [Crotalus adamanteus]
          Length = 629

 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 121/286 (42%), Gaps = 27/286 (9%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL N GN CF+NA LQ L S  P          R        T       ++D       
Sbjct: 282 GLRNLGNTCFMNAVLQCLSSTKPLRDYCLRREFRQEQPCTLRTQQELTEALADV------ 335

Query: 263 SSKKKNISVL---DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
                 I+ L   D     +PS F++V + + P    S +G   Q+DAQEFL F+MD++H
Sbjct: 336 ------IATLWHPDTSEAANPSRFKSVFQKYVP----SFTGY-SQQDAQEFLKFLMDRLH 384

Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
            E+ + +G  +    ++    S+ E+ E  +   +      R      S + D+F GQLK
Sbjct: 385 VEINR-KGRKSPCILSDAKWPSVLEDSETLSDDEQANQMWKRYLEREDSKIVDLFVGQLK 443

Query: 380 SVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTGN 434
           S +K Q     S T + F  L L I    ++    ++ D   LF+  E L+         
Sbjct: 444 SCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLLDCFNLFTKEEELDSENAPVCDK 503

Query: 435 AGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               T + K + IQ   +IL+LHL RFS       K    V FPLQ
Sbjct: 504 CRQRTRSTKKLTIQRFPRILVLHLNRFSTTRYSIKKCSVYVDFPLQ 549


>gi|226480822|emb|CAX73508.1| Ubiquitin carboxyl-terminal hydrolase 2 [Schistosoma japonicum]
          Length = 496

 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 129/286 (45%), Gaps = 37/286 (12%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRT-RDIPKAGYPT---LTAFVGFVSDFDT 258
           GL N GN CF+N+ LQ L + +P  +   E R  +DI K+         ++   + +   
Sbjct: 161 GLNNLGNTCFMNSILQCLSNTAPLTEYCLEDRYLKDINKSSSMNGMLFRSYADLMKEIWD 220

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P   +S              SPS F++ ++ F P           Q+D+QEFL ++++ +
Sbjct: 221 PDMANSST------------SPSRFKSQIQRFAPRFMGY-----SQQDSQEFLRYVLEGL 263

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP---SALSDIFG 375
           H E+ ++Q             +    + E E   P N+ A    + +L    S + D+F 
Sbjct: 264 HMEVNRVQKRP----------IPTKPDYEAEDRLPDNEKANLYWRRYLSMDNSEIVDLFV 313

Query: 376 GQLKSVVK-AQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRTSSTG 433
           GQL S ++ A  +  S T  PF  L L I  +    I D L LF++ E L+G  R   + 
Sbjct: 314 GQLMSTLECADCSFKSTTFDPFWDLSLPIPKKPNVNILDCLNLFTSKEELDGDERAICSR 373

Query: 434 NAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                   KS  IQ   +IL+LHL RFS G +  +K+   V +PL+
Sbjct: 374 CKTRRRCTKSFSIQKFPQILVLHLKRFS-GERFRSKMSVMVDYPLR 418


>gi|198433676|ref|XP_002129026.1| PREDICTED: similar to ubiquitin specific protease 41 [Ciona
           intestinalis]
          Length = 543

 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 128/287 (44%), Gaps = 41/287 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELR-----TRDIPKAGYPTLTAFVGFVSDFD 257
           GL N GN CF+N+ LQ L + +   +   +        R+ P  G   + AFV  +    
Sbjct: 202 GLRNIGNTCFMNSILQCLSNTTILREYCMDETYKGEINRNSPMKG-DLMRAFVEVLVRLW 260

Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
            P+G S               SP+ F++ ++ F+P           Q+D QEFL F+++ 
Sbjct: 261 KPNGIS--------------HSPNNFKSKIQKFSPRFMGY-----EQQDCQEFLRFLLEG 301

Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
           +H+++ +++ +S         L  L+     E          T+  SF+     D+F GQ
Sbjct: 302 LHEDINRVRIKSKE------PLRELSHLSPQEKARATWSWYTTKDDSFI----FDLFVGQ 351

Query: 378 LKSVVKAQGNK-ASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSST 432
           L+S ++ Q  +  S T  PF  L L I    YS  V TI D L  F+  E L+       
Sbjct: 352 LESSLECQECRHTSLTYDPFWDLSLPISKKMYSNEVTTITDCLDNFTREETLDKDEKPIC 411

Query: 433 GNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
               V  T  K + I    K+L+LHL RF+ GS+   KL+  V+FP+
Sbjct: 412 ERCKVRRTMTKKLSIHKFPKVLVLHLKRFNEGSRYRQKLNNLVKFPV 458


>gi|219119288|ref|XP_002180407.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217407880|gb|EEC47815.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 348

 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 130/291 (44%), Gaps = 40/291 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL------QELRTRDIPKAGYPTLTAFVGFVSDF 256
           GL N GN CFLN++LQ L +  P            E+   ++   G    TA+   + + 
Sbjct: 4   GLRNLGNTCFLNSSLQCLSATIPLTDYFLGYDYRSEINQHNVLGTGGKLATAYAELMKEL 63

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
              +   S    IS     R   P+ F++ L++F P    +      Q DAQE LSF++D
Sbjct: 64  WLQAAPVSGYTKIS----ARVVKPTRFKSSLESFAPQFLGT-----SQHDAQELLSFLLD 114

Query: 317 QMHDELLKL----QGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSD 372
            +H++L ++      E    +G +    ++   + W+    ++KS V            D
Sbjct: 115 GIHEDLNRIPKKPYIEDRDCDGTHDERDAI---EAWKNYLRRDKSLVV-----------D 160

Query: 373 IFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL--EGYRT 429
           IF GQL++ +        +   +PF+ L L +  ++ HT++D LRL+ A E L  E    
Sbjct: 161 IFQGQLRNTLTCLTCRHVNVRFEPFMYLSLPLNDDS-HTLDDCLRLYLAEERLVRENQWY 219

Query: 430 SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPL 478
            S         KK+  +  +  ILI+HL RF +   G   +K +  +R+P+
Sbjct: 220 CSVCQTHRDATKKT-DLWIVPAILIVHLKRFKFNEYGQLGSKNNACIRYPV 269


>gi|357140850|ref|XP_003571975.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like
           [Brachypodium distachyon]
          Length = 971

 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 122/288 (42%), Gaps = 55/288 (19%)

Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVGFVS 254
           V+ + PRGL N GN C+ NA LQ LM   P  + LL  L ++D  K G   +     + S
Sbjct: 430 VRGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCSKNGC-LMCELEQYAS 488

Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
                          ++ + G P SPS   + L+N    +     G   QEDA EFL  +
Sbjct: 489 ---------------TLRESGGPVSPSRILSNLRNIGCRL-----GGGSQEDAHEFLRHL 528

Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
           +  M    L        + G      SL E                       + +  +F
Sbjct: 529 VMSMQAACLD------GLGGEKHVEPSLQET----------------------TLIQQMF 560

Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
           GG+LKS VK  +    S   +  + L L+I+   V +++DAL  F+APE+L+G      G
Sbjct: 561 GGRLKSKVKCLRCLHESERYENIMDLTLEIHG-WVESLQDALTQFTAPEDLDGENMYKCG 619

Query: 434 N-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
                V A+K + +  +  IL + L RF  G  G  K++K V FP  L
Sbjct: 620 RCCAYVKARKQLSVHEVPNILTVVLKRFQTGKYG--KINKCVTFPEML 665


>gi|426244688|ref|XP_004016152.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 1 [Ovis
           aries]
 gi|426244690|ref|XP_004016153.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 2 [Ovis
           aries]
          Length = 606

 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 127/289 (43%), Gaps = 44/289 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+  +      A    + +F     
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSS----RAHTALMEEF----- 319

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++     S    NT  +    +DE      K +    +      S + D+F GQL
Sbjct: 371 HNEVNRVTARPKS----NTENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 420

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G    +  
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPITKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 478

Query: 434 NAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
           +      K+ +K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 479 HCRA--RKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTAFVNFPLR 525


>gi|3800762|gb|AAC68864.1| ubiquitin specific protease 52 [Gallus gallus]
          Length = 465

 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 123/287 (42%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ    RD+              +S+F     
Sbjct: 128 GLGNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNS----RMRTALMSEF----- 178

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I +L    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 179 ----AKLIQLLWTSSPNHSVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 229

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H E+ ++         AN   +    +DE      K++    R Q    S +SD+F  QL
Sbjct: 230 HGEVNRVLVRPR----ANADTLDHLPDDE------KSRQMWRRYQEREDSRVSDLFVAQL 279

Query: 379 KS-VVKAQGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
           KS +  ++    S    PF  L L I    Y E   T+ D LRLF+  + L+G    +  
Sbjct: 280 KSSLTCSECGYCSTAFDPFWDLSLPIPKKGYGEV--TLMDCLRLFTKEDVLDGDEKPTCC 337

Query: 434 NAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                T   K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 338 RCKARTRCTKKFSIQKFPKILVLHLKRFSEARIRASKLTTFVNFPLK 384


>gi|449267415|gb|EMC78360.1| Ubiquitin carboxyl-terminal hydrolase 2, partial [Columba livia]
          Length = 450

 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 126/287 (43%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDI---PKAGYPTLTAFVGFVSDFDT 258
           GL N GN CF+N+ LQ L +        LQ    RD+    +     ++ F   +    T
Sbjct: 113 GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQLLWT 172

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
               SS  +N+S         PS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 173 ----SSPNENVS---------PSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 214

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H E+ ++         A+T  +    +DE      K++    R Q    S +SD+F GQL
Sbjct: 215 HSEVNRVLVRPR----ASTDTLDHLPDDE------KSRQMWRRYQEREDSRISDLFVGQL 264

Query: 379 KS-VVKAQGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
           KS +  ++    S    PF  L L I    Y E   T+ D LRLF+  + L+G    +  
Sbjct: 265 KSSLTCSECGYCSTAFDPFWDLSLPIPKKSYGEV--TLMDCLRLFTKEDVLDGDEKPTCC 322

Query: 434 NAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                T   K   IQ   KIL+LHL RFS     ++KL   V F L+
Sbjct: 323 RCKARTRCTKKFSIQKFPKILVLHLKRFSEARIRTSKLTTFVNFQLK 369


>gi|327290078|ref|XP_003229751.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 2-like, partial [Anolis carolinensis]
          Length = 666

 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 122/291 (41%), Gaps = 47/291 (16%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ    RD+       +     F         
Sbjct: 328 GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYVRDLNNNSRMQMNLMAEFA-------- 379

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  L    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 380 -----KLIQALWTSSPNESVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 429

Query: 319 HDE----LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
           H E    L++ +G      G++ +L  L +E+       K +    R  +   S + D+F
Sbjct: 430 HSEVNRILVRPKG------GSSDSLDHLPDEE-------KGRQMWMRYLAREDSRIGDLF 476

Query: 375 GGQLKSVVKAQ-GNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRT 429
            GQLKS +        S    PF  L L I    Y E    + D LRLF+  + L+G   
Sbjct: 477 VGQLKSSLTCSVCGHCSTAFDPFWDLSLPIAKKSYGEV--NLADCLRLFTKEDILDGDEK 534

Query: 430 SSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
            +  +    T   K   IQ   KIL+LHL RFS     S+KL   V FPL+
Sbjct: 535 PTCCHCKARTKCTKKFSIQRFPKILVLHLKRFSEARIRSSKLTTFVNFPLK 585


>gi|344293060|ref|XP_003418242.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Loxodonta
           africana]
          Length = 396

 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 126/289 (43%), Gaps = 44/289 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+  +     +A    + +F     
Sbjct: 59  GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSS----SAHTALMEEF----- 109

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 110 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 160

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++     S    N   +    +DE      K +    +      S + D+F GQL
Sbjct: 161 HNEVNRVTVRPKS----NPENLDRLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 210

Query: 379 KSVVKA-QGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
           KS +   +    S    PF  L L I    Y E   T+ D +RLF+  + L+G    +  
Sbjct: 211 KSSLTCTECGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 268

Query: 434 NAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
             G    K+ +K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 269 RCGA--RKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVSFPLR 315


>gi|40555741|gb|AAH64516.1| USP10 protein, partial [Homo sapiens]
          Length = 194

 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/116 (40%), Positives = 72/116 (62%), Gaps = 4/116 (3%)

Query: 373 IFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSST 432
           IFGG ++SVV  Q +K SAT+QPF  L LDI S+ + T++DAL    A E+++GY T + 
Sbjct: 1   IFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDALESLVARESVQGYTTKTK 60

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQGSTKLHKSVRFPLQLVLGRDLL 487
                V   + V ++ L  +L+LHL RF Y  + G  KL K++ +P+ L + ++LL
Sbjct: 61  QE---VEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEYPVDLEISKELL 113


>gi|62027426|gb|AAH92078.1| Usp8 protein, partial [Mus musculus]
          Length = 419

 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 119/283 (42%), Gaps = 33/283 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 79  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 132

Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
              K      L  G  R  SP  F+  +         S      Q+D+QE L F+MD +H
Sbjct: 133 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 182

Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           ++L K           N  L  L A E  W+     N+S +             +F GQ 
Sbjct: 183 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIV-----------ALFQGQF 231

Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
           KS V+     + S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 232 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 291

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 292 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 334


>gi|115640606|ref|XP_784858.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8
            [Strongylocentrotus purpuratus]
          Length = 1187

 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/313 (25%), Positives = 134/313 (42%), Gaps = 49/313 (15%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKA-----GYPTLTAFVGFVSDF 256
            GL N GN CF+N+ +Q L + +P  +  + +   +DI +A     G      F   V   
Sbjct: 851  GLRNLGNTCFMNSVVQCLSNTTPLAKYFITDDYLQDINRANPLGRGGEVAEEFAVVVR-- 908

Query: 257  DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
               +  S + ++I+  D+            +  + P+    +       D+QEFL F++D
Sbjct: 909  ---ANWSGQYRSIAPRDL---------RDTVTKYVPEFRKHVG---HHHDSQEFLLFLLD 953

Query: 317  QMHDELLKLQGESTSINGANTALVSLAEED-------EWETVGPKNKSAVTRTQSFLPSA 369
             +H++L +++               + EED       E   +  +N   + R      S 
Sbjct: 954  GLHEDLNEVKKRQY-----------IKEEDFSKYPDHEAAGLSWRNHEKLNR------SI 996

Query: 370  LSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYR 428
            +  +F GQ KS V+    N  S   + F+ L L I S++  ++ + L+ FS PE L G  
Sbjct: 997  IVSLFQGQFKSTVRCLSCNNKSVKFEAFMYLSLPIASKSKCSLHECLQQFSKPEELTGDN 1056

Query: 429  -TSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLL 487
             T  T   G   ++K++ I  L  IL++HL RF Y      KL  +V FP  L + R ++
Sbjct: 1057 ATHCTHCKGNRKSEKTILIWKLPHILLIHLKRFYYEGMWRQKLQTNVDFPNDLTMDRYVI 1116

Query: 488  VTPSAEVLQFLNV 500
                  + Q   V
Sbjct: 1117 GPAQRNIYQLYGV 1129


>gi|114053169|ref|NP_001039728.1| ubiquitin carboxyl-terminal hydrolase 2 [Bos taurus]
 gi|122135912|sp|Q2KHV7.1|UBP2_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
           Full=41 kDa ubiquitin-specific protease; AltName:
           Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
           thioesterase 2; AltName:
           Full=Ubiquitin-specific-processing protease 2
 gi|86438174|gb|AAI12867.1| Ubiquitin specific peptidase 2 [Bos taurus]
 gi|296480118|tpg|DAA22233.1| TPA: ubiquitin specific peptidase 2 [Bos taurus]
 gi|440904915|gb|ELR55367.1| Ubiquitin carboxyl-terminal hydrolase 2 [Bos grunniens mutus]
          Length = 606

 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 124/287 (43%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+  +      A    + +F     
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSS----RAHTALMEEF----- 319

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++     S    NT  +    +DE      K +    +      S + D+F GQL
Sbjct: 371 HNEVNRVIARPKS----NTENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 420

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPITKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 478

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                    K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 479 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTAFVNFPLR 525


>gi|410986643|ref|XP_003999619.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 1
           [Felis catus]
 gi|410986645|ref|XP_003999620.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 2
           [Felis catus]
 gi|410986647|ref|XP_003999621.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 3
           [Felis catus]
          Length = 566

 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 133/302 (44%), Gaps = 45/302 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 214 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 272

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 273 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 314

Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
           H E+ +    +  I  +  A        +L EE E       N   K  + R      S 
Sbjct: 315 HLEINRRGRRAAPILASGAAASQPRRGGALLEEPELSDDDRANLMWKRYLERED----SK 370

Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
           + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E L
Sbjct: 371 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEEL 430

Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 481
           E             T + K + +Q   +IL+LHL RFS  S+GS K     V FPLQ L 
Sbjct: 431 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRLS 489

Query: 482 LG 483
           LG
Sbjct: 490 LG 491


>gi|403262562|ref|XP_003923645.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Saimiri
           boliviensis boliviensis]
          Length = 606

 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 123/287 (42%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+  +      A    V +F     
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYVRDLHHSS----NAHTALVEEF----- 319

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++     S    N   +    +DE      K +    +      S + D+F GQL
Sbjct: 371 HNEVNRVAPRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 420

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 478

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                    K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 479 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 525


>gi|20071587|gb|AAH27052.1| Usp8 protein, partial [Mus musculus]
          Length = 673

 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 119/283 (42%), Gaps = 33/283 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 333 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 386

Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
              K      L  G  R  SP  F+  +         S      Q+D+QE L F+MD +H
Sbjct: 387 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 436

Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           ++L K           N  L  L A E  W+     N+S +             +F GQ 
Sbjct: 437 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIV-----------ALFQGQF 485

Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
           KS V+     + S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 486 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 545

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 546 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 588


>gi|348561662|ref|XP_003466631.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like [Cavia
           porcellus]
          Length = 566

 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 131/301 (43%), Gaps = 43/301 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 214 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 272

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 273 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 314

Query: 319 HDELLKLQGESTSI--NGANTALV----SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
           H E+ +    +  I  NG   +L     +L EE E       N   K  + R      S 
Sbjct: 315 HLEINRRGRRAPPILANGPVPSLPRRGGALLEEPELSDDDRANLMWKRYLERED----SK 370

Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
           + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E L
Sbjct: 371 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 430

Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVL 482
           E             T + K + +Q   +IL+LHL RFS       K    V FPLQ L L
Sbjct: 431 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDFPLQRLSL 490

Query: 483 G 483
           G
Sbjct: 491 G 491


>gi|384247322|gb|EIE20809.1| peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, partial
           [Coccomyxa subellipsoidea C-169]
          Length = 380

 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 123/288 (42%), Gaps = 44/288 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDI----PKAGYPTLTAFVGFVSDFD 257
           GL N GN CF+N+++Q L   +P V++ L     RD+    P      L    G +    
Sbjct: 4   GLSNLGNTCFMNSSVQCLAHAAPLVRVFLTGAYKRDLNPDNPLGNKGELAEAFGSLMKLL 63

Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
              G  S              SP  F+A L  F P       G   Q+D+QE L+F++D 
Sbjct: 64  WQGGVGS-------------VSPKGFKAALARFAPQF-----GGYSQQDSQELLAFLLDG 105

Query: 318 MHDELLKLQG----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 373
           +H++L +++     E     G    +V+    + W+    +N S V            D 
Sbjct: 106 LHEDLNRVRQKPYVEEADAEGRPDKVVA---AEAWDNYRKRNDSVVV-----------DH 151

Query: 374 FGGQLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDAL-RLFSAPENLEGYRTSS 431
           F G  KS +V  Q + +S    PF+ L L + S    T+   L   F  PE L+   +  
Sbjct: 152 FQGLYKSTLVCPQCSFSSVKFDPFMYLSLPLPSSKTRTLYITLIYAFLQPEQLDAADSWY 211

Query: 432 TGNAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
            G     V A+K + + +L ++L++HL RFSY      KL   V FPL
Sbjct: 212 CGRCKEHVRAEKKLDLWSLPELLVVHLKRFSYSRHSRDKLDAPVHFPL 259


>gi|349603765|gb|AEP99510.1| Ubiquitin carboxyl-terminal hydrolase 8-like protein, partial
           [Equus caballus]
          Length = 394

 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 54  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 107

Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
              K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 108 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 157

Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 158 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 206

Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
           KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 207 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 266

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 267 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 309


>gi|363737746|ref|XP_003641901.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Gallus
            gallus]
          Length = 1116

 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 133/301 (44%), Gaps = 33/301 (10%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +     +   + L   DI ++       F+G   +     G
Sbjct: 776  GLRNLGNTCYMNSILQCLCNAPHLAEYFNKNLYQDDINRSN------FLGHKGEVAEEFG 829

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  +  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 830  VIMK-----ALWTGQYKYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 879

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L  L A E  W+     N+S +             +F GQ 
Sbjct: 880  EDLNKADNRKRYKEENNDHLDDLKAAELAWQKHKQLNESIIV-----------ALFQGQF 928

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T+++ LRLFS  E L +  R   +    
Sbjct: 929  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQECLRLFSKEEKLTDNNRFYCSHCKT 988

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+ +     ++ P   + +
Sbjct: 989  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLETLDLSQYVIGPKNNLKR 1048

Query: 497  F 497
            +
Sbjct: 1049 Y 1049


>gi|345797847|ref|XP_536136.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Canis lupus
           familiaris]
          Length = 565

 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 134/302 (44%), Gaps = 45/302 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313

Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
           H E+ +    +  I  ++ A        +L EE E       N   K  + R      S 
Sbjct: 314 HLEINRRGRRAPPILASSPAPAQPRRGGALLEEPELSDDDRANLMWKRYLERED----SK 369

Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
           + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 429

Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 481
           E             T + K + +Q   +IL+LHL RFS  S+GS K     V FPLQ L 
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRLS 488

Query: 482 LG 483
           LG
Sbjct: 489 LG 490


>gi|299689340|pdb|3N3K|A Chain A, The Catalytic Domain Of Usp8 In Complex With A Usp8
           Specific Inhibitor
          Length = 396

 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 64  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 117

Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
              K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 118 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 167

Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 168 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 216

Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
           KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 217 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 276

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 277 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 319


>gi|363737748|ref|XP_413830.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Gallus
            gallus]
          Length = 1125

 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 133/301 (44%), Gaps = 33/301 (10%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +     +   + L   DI ++       F+G   +     G
Sbjct: 785  GLRNLGNTCYMNSILQCLCNAPHLAEYFNKNLYQDDINRSN------FLGHKGEVAEEFG 838

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  +  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 839  VIMK-----ALWTGQYKYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 888

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L  L A E  W+     N+S +             +F GQ 
Sbjct: 889  EDLNKADNRKRYKEENNDHLDDLKAAELAWQKHKQLNESIIV-----------ALFQGQF 937

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T+++ LRLFS  E L +  R   +    
Sbjct: 938  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQECLRLFSKEEKLTDNNRFYCSHCKT 997

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+ +     ++ P   + +
Sbjct: 998  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLETLDLSQYVIGPKNNLKR 1057

Query: 497  F 497
            +
Sbjct: 1058 Y 1058


>gi|291413016|ref|XP_002722763.1| PREDICTED: ubiquitin specific peptidase 2 [Oryctolagus cuniculus]
          Length = 607

 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 123/287 (42%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+  +      A    + +F     
Sbjct: 270 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSS----NAHTALMEEF----- 320

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 321 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 371

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++     S    N   +    +DE      K +    +      S + D+F GQL
Sbjct: 372 HNEVNRVTARPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 421

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGY-RTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 422 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGEEKPTCC 479

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                    K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 480 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 526


>gi|11993475|gb|AAG42756.1|AF302665_1 ubiquitin-specific protease 15 [Arabidopsis thaliana]
          Length = 924

 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 122/290 (42%), Gaps = 58/290 (20%)

Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVS 254
           V DL PRGL+N GN C+ NA LQ+L    P V  LL+   +R      +  +      V 
Sbjct: 432 VFDLSPRGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSGKDWCLMCELEQHV- 490

Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
                         + + + G P S S   + +++    +     G   QEDA EFL  +
Sbjct: 491 --------------MMLRESGGPLSASRILSHMRSINCQI-----GDGSQEDAHEFLRLL 531

Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
           +  M    L+  G  T ++                   P+ +           + +  +F
Sbjct: 532 VASMPSICLERLGGETKVD-------------------PRLQET---------TLVQHMF 563

Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTS 430
           GG+L S VK  + +  S   +  + L L+IY   V   +DAL  F+ PE+L+G   YR S
Sbjct: 564 GGRLHSKVKCLRCDHESERYENIMDLTLEIYG-WVEFFQDALIQFTRPEDLDGENMYRCS 622

Query: 431 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
               AG V A+K + I     IL + L RF  G  G  K++K + FP  L
Sbjct: 623 RC--AGYVRARKELSIHEAPNILTIVLKRFQEGRYG--KINKCISFPEML 668


>gi|449471131|ref|XP_002197001.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Taeniopygia
            guttata]
          Length = 1087

 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 132/301 (43%), Gaps = 33/301 (10%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +     +   + L   DI ++       F+G   +     G
Sbjct: 747  GLRNLGNTCYMNSILQCLCNAPHLAEYFNRNLYQADINRSN------FLGHKGEVAEEFG 800

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  +  SP  F+  +      + +  SG   Q+D+QE L F+MD +H
Sbjct: 801  VIMK-----ALWAGQYKYISPKDFKITIGK----INDQFSGYS-QQDSQELLLFLMDGLH 850

Query: 320  DELLKLQGESTSINGANTALV-SLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L  S A E  W      N+S +             +F GQ 
Sbjct: 851  EDLNKADNRKRYKEENNDHLDDSSAAEIAWHKHKQLNESIIV-----------ALFQGQF 899

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T+++ LRLFS  E L +  R   +    
Sbjct: 900  KSTVQCLTCHKRSRTFEAFMYLSLPLASSSKCTLQECLRLFSKEEKLTDNNRFYCSHCKT 959

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+ +     ++ P   + +
Sbjct: 960  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLETLDLSQYVIGPKTSLKR 1019

Query: 497  F 497
            +
Sbjct: 1020 Y 1020


>gi|126277553|ref|XP_001370028.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Monodelphis
            domestica]
          Length = 1102

 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 121/283 (42%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 762  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNFYQDDINRSN------LLGHKGEVAEEFG 815

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +        +  SG   Q+D+QE L F+MD +H
Sbjct: 816  IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFSGY-SQQDSQELLLFLMDGLH 865

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 866  EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 914

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 915  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCKT 974

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 975  RRDSMKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1017


>gi|320167272|gb|EFW44171.1| Usp8 protein [Capsaspora owczarzaki ATCC 30864]
          Length = 1162

 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 125/301 (41%), Gaps = 43/301 (14%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
            GL N GN CF+N+ LQ L              +  +P   Y     F   V+ ++    G
Sbjct: 881  GLRNLGNTCFMNSMLQCL--------------SHTMPVTAYFISNKFRQDVNRYNRLGRG 926

Query: 263  SSKKKNIS------VLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
                ++ S       L   R FSPS F   +  F P           Q D+QE L+F++D
Sbjct: 927  GILAESFSELLRNLWLQRFRCFSPSDFLGAVCRFGPQFAGG-----EQHDSQELLAFLLD 981

Query: 317  QMHDEL------LKLQGESTSINGANTALVSLA------EEDEWETVGP---KNKSAVTR 361
             +H++L         Q   T  +G    + +L       EEDE     P   + + A  R
Sbjct: 982  GLHEDLNTKGLTKNNQQLITQSDGTRALVAALPNRDQQEEEDEARRNMPVELRAERAWQR 1041

Query: 362  TQSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSEAVH-TIEDALRLFS 419
             +    S + D+F G  KS ++      AS T  PF+ L L I  +  H T+ D + LF+
Sbjct: 1042 YKQRNDSVIVDMFQGLFKSSIQCDVCRHASITFSPFMFLSLPIPLDKTHPTLADCIELFT 1101

Query: 420  APENLEGYRTSSTGNAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
              E ++G             +A KS+++  L  +L++H  RF Y      KLH  V FPL
Sbjct: 1102 RSERIDGENQWFCERCRQHRSAVKSLQLWKLPPVLLIHFKRFYYDGPWRDKLHHYVEFPL 1161

Query: 479  Q 479
            +
Sbjct: 1162 E 1162


>gi|297787764|pdb|3MTN|A Chain A, Usp21 In Complex With A Ubiquitin-based, Usp21-specific
           Inhibitor
 gi|297787766|pdb|3MTN|C Chain C, Usp21 In Complex With A Ubiquitin-based, Usp21-specific
           Inhibitor
          Length = 373

 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 138/313 (44%), Gaps = 53/313 (16%)

Query: 199 LLPRG------LINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-A 248
           L+PRG      L N GN CFLNA LQ L S  P     L ++ R +++P  G    LT A
Sbjct: 14  LVPRGSSGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEA 72

Query: 249 FVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQ 308
           F   +     P             D     +P+ F AV + + P    S SG   Q+DAQ
Sbjct: 73  FADVIGALWHP-------------DSCEAVNPTRFRAVFQKYVP----SFSGYS-QQDAQ 114

Query: 309 EFLSFIMDQMHDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSA 358
           EFL  +M+++H E+ + +G       AN  + S       L EE E       N   K  
Sbjct: 115 EFLKLLMERLHLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRY 173

Query: 359 VTRTQSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIED 413
           + R      S + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D
Sbjct: 174 LERED----SKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRD 229

Query: 414 ALRLFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 472
              LF+  E LE             T + K + +Q   +IL+LHL RFS  S+GS K   
Sbjct: 230 CFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSS 288

Query: 473 -SVRFPLQ-LVLG 483
             V FPLQ L LG
Sbjct: 289 VGVDFPLQRLSLG 301


>gi|395503242|ref|XP_003755979.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2
           [Sarcophilus harrisii]
          Length = 1069

 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 729 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNFYQDDINRSN------LLGHKGEVAEEFG 782

Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
              K      L  G  R  SP  F+  +      + +  SG   Q+D+QE L F+MD +H
Sbjct: 783 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFSGY-SQQDSQELLLFLMDGLH 832

Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 833 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 881

Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
           KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 882 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCKT 941

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 942 RRDSMKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 984


>gi|114052498|ref|NP_932760.2| ubiquitin carboxyl-terminal hydrolase 2 isoform Usp2-69 [Mus
           musculus]
 gi|114052502|ref|NP_058088.2| ubiquitin carboxyl-terminal hydrolase 2 isoform Usp2-69 [Mus
           musculus]
 gi|17028406|gb|AAH17517.1| Ubiquitin specific peptidase 2 [Mus musculus]
 gi|34874899|gb|AAQ83302.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
 gi|34874937|gb|AAQ83304.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
 gi|74218334|dbj|BAE23782.1| unnamed protein product [Mus musculus]
          Length = 619

 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 126/287 (43%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+   G+ T +A    + +F     
Sbjct: 282 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 332

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 333 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFMGY-----NQQDAQEFLRFLLDGL 383

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++         +   L  L +E+       K +    +      S + D+F GQL
Sbjct: 384 HNEVNRVAARP---KASPETLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 433

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 434 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDGDEKPTCC 491

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                    K   +Q   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 492 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 538


>gi|356546765|ref|XP_003541793.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Glycine
           max]
          Length = 990

 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 118/286 (41%), Gaps = 56/286 (19%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDFD 257
           + PRGL+N GN C+ NA LQ L S  P V  LL    ++      +  +           
Sbjct: 468 IYPRGLLNCGNSCYANAVLQCLTSTKPLVVYLLYRSHSKACCAKDWCLMCEL-------- 519

Query: 258 TPSGGSSKKKNISVL-DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
                   +K+I VL + G P SPS     +++      N   G   QEDA EFL  ++ 
Sbjct: 520 --------EKHIMVLRENGDPLSPSRILWHMRSI-----NCHMGEGNQEDAHEFLRLLIA 566

Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
            M    L+  G                        G K      +  +F+       FGG
Sbjct: 567 SMQSICLEALG------------------------GEKKVDPRLQETTFI----QHTFGG 598

Query: 377 QLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 435
           +L+S VK  + N  S   +  + L L+I    V ++EDAL  F++PE+L+G      G  
Sbjct: 599 RLQSKVKCLKCNHESERYENIMDLTLEILG-WVESLEDALTQFTSPEDLDGENMYRCGRC 657

Query: 436 -GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
              V A+K + I     IL + L RF  G  G  K++K + FP  L
Sbjct: 658 TSYVRARKQLSIHEAPNILTIVLKRFQEGRYG--KINKCITFPEML 701


>gi|395503240|ref|XP_003755978.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1
            [Sarcophilus harrisii]
          Length = 1100

 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 760  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNFYQDDINRSN------LLGHKGEVAEEFG 813

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +      + +  SG   Q+D+QE L F+MD +H
Sbjct: 814  IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFSGY-SQQDSQELLLFLMDGLH 863

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 864  EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 912

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 913  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCKT 972

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 973  RRDSMKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1015


>gi|313233845|emb|CBY10014.1| unnamed protein product [Oikopleura dioica]
          Length = 1046

 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 129/288 (44%), Gaps = 46/288 (15%)

Query: 200 LPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL------------RTRDIPKAGYP--- 244
           +PRGLIN  N C++N+ LQ  + C P   LL +L             T++I + G     
Sbjct: 678 VPRGLINQANSCWVNSILQTALVCDPLYHLLCKLLKYTSNSNGENQNTKEIARIGAEIKR 737

Query: 245 TLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQ 304
            L         FD           I V   G  +        +    P +  S+     Q
Sbjct: 738 MLPTCAKLAEVFD----------QIVVNKGGMAYEAKDIYGHISTLNPTI--SVG----Q 781

Query: 305 EDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT-- 362
           +DA+E LS +++ MHDE++ L+ ++  IN   +  V+ A E  W+  G +   AV  +  
Sbjct: 782 QDAEEGLSLLLNAMHDEIVALK-KAAGINTKASQAVTSAGEG-WQVSGRQRAFAVATSAT 839

Query: 363 -QSFLPSALSDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDIY------SEAVHTIEDA 414
             +F  + +S  F G  +S +K   +++   T +PF  L +++       SE   +IE+ 
Sbjct: 840 GSAFDETPISAGFRGISQSSIKLPSHQSPPPTEEPFFTLKVEVPPPPMPGSEKAISIEEC 899

Query: 415 LRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 462
           LRL    E L+ YR   TG +  VTA + V +  L   LILH+ RF +
Sbjct: 900 LRLTPKEETLDEYRL-KTGQS--VTATRKVSLAALPPFLILHMKRFQF 944


>gi|374073975|pdb|2Y5B|A Chain A, Structure Of Usp21 In Complex With Linear
           Diubiquitin-Aldehyde
 gi|374073977|pdb|2Y5B|E Chain E, Structure Of Usp21 In Complex With Linear
           Diubiquitin-Aldehyde
          Length = 370

 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 134/303 (44%), Gaps = 47/303 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 18  GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 76

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 77  P-------------DSCEAVNPTRFRAVFQKYVP----SFSGYS-QQDAQEFLKLLMERL 118

Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
           H E+ + +G       AN  + S       L EE E       N   K  + R      S
Sbjct: 119 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 173

Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
            + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E 
Sbjct: 174 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 233

Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 480
           LE             T + K + +Q   +IL+LHL RFS  S+GS K     V FPLQ L
Sbjct: 234 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRL 292

Query: 481 VLG 483
            LG
Sbjct: 293 SLG 295


>gi|254575047|pdb|3I3T|A Chain A, Crystal Structure Of Covalent Ubiquitin-usp21 Complex
 gi|254575048|pdb|3I3T|C Chain C, Crystal Structure Of Covalent Ubiquitin-usp21 Complex
 gi|254575049|pdb|3I3T|E Chain E, Crystal Structure Of Covalent Ubiquitin-usp21 Complex
 gi|254575050|pdb|3I3T|G Chain G, Crystal Structure Of Covalent Ubiquitin-usp21 Complex
          Length = 355

 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 134/303 (44%), Gaps = 47/303 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 5   GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 63

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 64  P-------------DSCEAVNPTRFRAVFQKYVP----SFSGYS-QQDAQEFLKLLMERL 105

Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
           H E+ + +G       AN  + S       L EE E       N   K  + R      S
Sbjct: 106 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 160

Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
            + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E 
Sbjct: 161 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 220

Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 480
           LE             T + K + +Q   +IL+LHL RFS  S+GS K     V FPLQ L
Sbjct: 221 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRL 279

Query: 481 VLG 483
            LG
Sbjct: 280 SLG 282


>gi|301786749|ref|XP_002928787.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like
           [Ailuropoda melanoleuca]
 gi|281352153|gb|EFB27737.1| hypothetical protein PANDA_018837 [Ailuropoda melanoleuca]
          Length = 565

 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 134/302 (44%), Gaps = 45/302 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313

Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
           H E+ +    +  I  ++ A        +L EE +       N   K  + R      S 
Sbjct: 314 HLEINRRGRRAPPILASSAAPCQPRRGGALLEEPDLSDDDRANLMWKRYLERED----SK 369

Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
           + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 429

Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 481
           E             T + K + +Q   +IL+LHL RFS  S+GS K     V FPLQ L 
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRLS 488

Query: 482 LG 483
           LG
Sbjct: 489 LG 490


>gi|296489875|tpg|DAA31988.1| TPA: ubiquitin carboxyl-terminal hydrolase 21 [Bos taurus]
 gi|440893879|gb|ELR46495.1| Ubiquitin carboxyl-terminal hydrolase 21 [Bos grunniens mutus]
          Length = 565

 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 134/302 (44%), Gaps = 45/302 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313

Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
           H E+ +    +  I  ++ A        +L EE E       N   K  + R      S 
Sbjct: 314 HLEINRRGRRAPPILASSPAPHPPRLGGALLEEPELSDDDRANLMWKRYLERED----SK 369

Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
           + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEEL 429

Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 481
           E             T + K + +Q   +IL+LHL RFS  S+GS K     V FPLQ L 
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRLS 488

Query: 482 LG 483
           LG
Sbjct: 489 LG 490


>gi|350583234|ref|XP_003481465.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Sus scrofa]
          Length = 610

 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 134/302 (44%), Gaps = 45/302 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 258 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 316

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 317 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 358

Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
           H E+ +    +  I  ++ A        +L EE E       N   K  + R      S 
Sbjct: 359 HLEINRRGRRAPPILASSPAPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----SK 414

Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
           + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E L
Sbjct: 415 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 474

Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 481
           E             T + K + +Q   +IL+LHL RFS  S+GS K     V FPLQ L 
Sbjct: 475 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRLS 533

Query: 482 LG 483
           LG
Sbjct: 534 LG 535


>gi|148696217|gb|EDL28164.1| ubiquitin specific peptidase 8, isoform CRA_b [Mus musculus]
          Length = 1119

 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 119/283 (42%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 779  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 832

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +         S      Q+D+QE L F+MD +H
Sbjct: 833  IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 882

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L  L A E  W+     N+S +             +F GQ 
Sbjct: 883  EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIV-----------ALFQGQF 931

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+     + S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 932  KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 991

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 992  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1034


>gi|194036892|ref|XP_001927817.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 1 [Sus
           scrofa]
          Length = 565

 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 134/302 (44%), Gaps = 45/302 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313

Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
           H E+ +    +  I  ++ A        +L EE E       N   K  + R      S 
Sbjct: 314 HLEINRRGRRAPPILASSPAPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----SK 369

Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
           + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 429

Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 481
           E             T + K + +Q   +IL+LHL RFS  S+GS K     V FPLQ L 
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRLS 488

Query: 482 LG 483
           LG
Sbjct: 489 LG 490


>gi|357588457|ref|NP_001239509.1| ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Mus musculus]
          Length = 1091

 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 119/283 (42%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 751  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 804

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +         S      Q+D+QE L F+MD +H
Sbjct: 805  IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 854

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L  L A E  W+     N+S +             +F GQ 
Sbjct: 855  EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIV-----------ALFQGQF 903

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+     + S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 904  KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 963

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 964  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1006


>gi|348574067|ref|XP_003472812.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 1
           [Cavia porcellus]
          Length = 611

 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 126/287 (43%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+      T +   G + +F     
Sbjct: 274 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSH----TSSVHTGLMEEF----- 324

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 325 ----AKLIQTIWTSCPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 375

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++     S   ++  L  L +++       K +    +      S + D+F GQL
Sbjct: 376 HNEVNRVAVRPKS---SHENLDHLPDDE-------KGRQMWRKYLEREDSRIGDLFVGQL 425

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 426 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDGDEKPTCC 483

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                    K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 484 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLSTFVNFPLR 530


>gi|114152901|sp|O88623.2|UBP2_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
           Full=41 kDa ubiquitin-specific protease; AltName:
           Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
           thioesterase 2; AltName:
           Full=Ubiquitin-specific-processing protease 2
 gi|34874927|gb|AAQ83303.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
          Length = 613

 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 126/287 (43%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+   G+ T +A    + +F     
Sbjct: 276 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 326

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 327 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFMGY-----NQQDAQEFLRFLLDGL 377

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++         +   L  L +E+       K +    +      S + D+F GQL
Sbjct: 378 HNEVNRVAARP---KASPETLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 427

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 428 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDGDEKPTCC 485

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                    K   +Q   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 486 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 532


>gi|397498540|ref|XP_003820038.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Pan paniscus]
          Length = 605

 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 123/287 (42%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+         A    V +F     
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 318

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 319 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 369

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++     S    N   +    +DE      K +    +      S + D+F GQL
Sbjct: 370 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 419

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 420 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 477

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              G     K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 478 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 524


>gi|395848444|ref|XP_003796860.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Otolemur
           garnettii]
          Length = 606

 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 123/287 (42%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+        +A    + +F     
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHGS----SAHTALMEEF----- 319

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++     S    N   +    +DE      K +    +      S + D+F GQL
Sbjct: 371 HNEVNRVAPRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 420

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 478

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                    K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 479 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 525


>gi|354471265|ref|XP_003497863.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Cricetulus
            griseus]
          Length = 1079

 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 127/301 (42%), Gaps = 33/301 (10%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 739  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 792

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +         S      Q+D+QE L F+MD +H
Sbjct: 793  IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 842

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 843  EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIV-----------ALFQGQF 891

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 892  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 951

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+ +     ++ P + + +
Sbjct: 952  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKSSLKK 1011

Query: 497  F 497
            +
Sbjct: 1012 Y 1012


>gi|148696218|gb|EDL28165.1| ubiquitin specific peptidase 8, isoform CRA_c [Mus musculus]
          Length = 1080

 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 119/283 (42%), Gaps = 33/283 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 740 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 793

Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
              K      L  G  R  SP  F+  +         S      Q+D+QE L F+MD +H
Sbjct: 794 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 843

Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           ++L K           N  L  L A E  W+     N+S +             +F GQ 
Sbjct: 844 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVA-----------LFQGQF 892

Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
           KS V+     + S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 893 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 952

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 953 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 995


>gi|157817586|ref|NP_001099972.1| ubiquitin carboxyl-terminal hydrolase 8 [Rattus norvegicus]
 gi|149023197|gb|EDL80091.1| ubiquitin specific protease 8 (predicted) [Rattus norvegicus]
          Length = 1081

 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 127/301 (42%), Gaps = 33/301 (10%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 741  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 794

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +         S      Q+D+QE L F+MD +H
Sbjct: 795  IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 844

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 845  EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIV-----------ALFQGQF 893

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 894  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 953

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+ +     ++ P + + +
Sbjct: 954  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKSSLKK 1013

Query: 497  F 497
            +
Sbjct: 1014 Y 1014


>gi|30584279|gb|AAP36388.1| Homo sapiens ubiquitin specific protease 2 [synthetic construct]
 gi|60652721|gb|AAX29055.1| ubiquitin specific protease 2 [synthetic construct]
          Length = 606

 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 123/287 (42%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+         A    V +F     
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 318

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 319 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 369

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++     S    N   +    +DE      K +    +      S + D+F GQL
Sbjct: 370 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 419

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 420 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 477

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              G     K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 478 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 524


>gi|344248888|gb|EGW04992.1| Ubiquitin carboxyl-terminal hydrolase 8 [Cricetulus griseus]
          Length = 1075

 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 127/301 (42%), Gaps = 33/301 (10%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 735  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 788

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +         S      Q+D+QE L F+MD +H
Sbjct: 789  IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 838

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 839  EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 887

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 888  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 947

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+ +     ++ P + + +
Sbjct: 948  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKSSLKK 1007

Query: 497  F 497
            +
Sbjct: 1008 Y 1008


>gi|194373951|dbj|BAG62288.1| unnamed protein product [Homo sapiens]
          Length = 565

 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 225 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 278

Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
              K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 279 IIMK-----ALWTGQYRYISPKDFKITVGK----INDQFAGYS-QQDSQELLLFLMDGLH 328

Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 329 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIV-----------ALFQGQF 377

Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
           KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 378 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 437

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 438 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 480


>gi|31981044|ref|NP_062703.2| ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Mus musculus]
 gi|44888442|sp|Q80U87.2|UBP8_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 8; AltName:
           Full=Deubiquitinating enzyme 8; AltName: Full=Ubiquitin
           isopeptidase Y; Short=mUBPy; AltName: Full=Ubiquitin
           thioesterase 8; AltName:
           Full=Ubiquitin-specific-processing protease 8
 gi|29747898|gb|AAH50947.1| Ubiquitin specific peptidase 8 [Mus musculus]
 gi|38181867|gb|AAH61465.1| Ubiquitin specific peptidase 8 [Mus musculus]
 gi|42490777|gb|AAH66126.1| Ubiquitin specific peptidase 8 [Mus musculus]
          Length = 1080

 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 119/283 (42%), Gaps = 33/283 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 740 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 793

Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
              K      L  G  R  SP  F+  +         S      Q+D+QE L F+MD +H
Sbjct: 794 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 843

Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           ++L K           N  L  L A E  W+     N+S +             +F GQ 
Sbjct: 844 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVA-----------LFQGQF 892

Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
           KS V+     + S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 893 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 952

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 953 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 995


>gi|74137217|dbj|BAE21996.1| unnamed protein product [Mus musculus]
          Length = 1080

 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 119/283 (42%), Gaps = 33/283 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 740 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 793

Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
              K      L  G  R  SP  F+  +         S      Q+D+QE L F+MD +H
Sbjct: 794 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 843

Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           ++L K           N  L  L A E  W+     N+S +             +F GQ 
Sbjct: 844 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIV-----------ALFQGQF 892

Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
           KS V+     + S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 893 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 952

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 953 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 995


>gi|355727944|gb|AES09362.1| ubiquitin specific peptidase 21 [Mustela putorius furo]
          Length = 592

 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 134/302 (44%), Gaps = 45/302 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 240 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 298

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 299 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 340

Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
           H E+ +    +  I  ++ A        +L EE E       N   K  + R      S 
Sbjct: 341 HLEINRRGRRAPPILASSPAPSQPRRGGALLEEPELSDDDRANLMWKRYLERED----SK 396

Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
           + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E L
Sbjct: 397 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 456

Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 481
           E             T + K + +Q   +IL+LHL RFS  S+GS K     V FPLQ L 
Sbjct: 457 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRLS 515

Query: 482 LG 483
           LG
Sbjct: 516 LG 517


>gi|297280506|ref|XP_001117779.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 6
           [Macaca mulatta]
          Length = 595

 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 134/303 (44%), Gaps = 47/303 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 243 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 301

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 302 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 343

Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
           H E+ + +G       AN  + S       L EE E       N   K  + R      S
Sbjct: 344 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 398

Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
            + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E 
Sbjct: 399 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 458

Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 480
           LE             T + K + +Q   +IL+LHL RFS  S+GS K     V FPLQ L
Sbjct: 459 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRL 517

Query: 481 VLG 483
            LG
Sbjct: 518 SLG 520


>gi|326926643|ref|XP_003209508.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Meleagris
            gallopavo]
          Length = 1124

 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 133/301 (44%), Gaps = 33/301 (10%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +     +   + L   DI ++       F+G   +     G
Sbjct: 784  GLRNLGNTCYMNSILQCLCNAPHLAEYFNRNLYHDDINRSN------FLGHKGEVAEEFG 837

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  +  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 838  VIMK-----ALWTGQYKYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 887

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L  L A E  W+     N+S +             +F GQ 
Sbjct: 888  EDLNKADNRKRYKEENNDHLDDLRAAELAWQKHKQLNESIIV-----------ALFQGQF 936

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T+++ LRLFS  E L +  R   +    
Sbjct: 937  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQECLRLFSKEEKLTDNNRFYCSHCKT 996

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+ +     ++ P   + +
Sbjct: 997  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLETLDLSQYVIGPKNNLKR 1056

Query: 497  F 497
            +
Sbjct: 1057 Y 1057


>gi|74218724|dbj|BAE25218.1| unnamed protein product [Mus musculus]
          Length = 988

 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 119/283 (42%), Gaps = 33/283 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 648 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 701

Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
              K      L  G  R  SP  F+  +         S      Q+D+QE L F+MD +H
Sbjct: 702 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 751

Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           ++L K           N  L  L A E  W+     N+S +             +F GQ 
Sbjct: 752 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIV-----------ALFQGQF 800

Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
           KS V+     + S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 801 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 860

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 861 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 903


>gi|123998135|gb|ABM86669.1| ubiquitin specific peptidase 2 [synthetic construct]
          Length = 605

 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 123/287 (42%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+         A    V +F     
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 318

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 319 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 369

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++     S    N   +    +DE      K +    +      S + D+F GQL
Sbjct: 370 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 419

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 420 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 477

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              G     K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 478 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 524


>gi|194212776|ref|XP_001501250.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Equus
           caballus]
          Length = 606

 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 124/287 (43%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+  +      A    + +F     
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSS----NAHTALMEEF----- 319

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++    T    +N   +    +DE      K +    +      S + D+F GQL
Sbjct: 371 HNEVNRV----TVRPKSNPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 420

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 478

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                    K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 479 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 525


>gi|114640783|ref|XP_001166112.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 5 [Pan
           troglodytes]
          Length = 605

 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 123/287 (42%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+         A    V +F     
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 318

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 319 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 369

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++     S    N   +    +DE      K +    +      S + D+F GQL
Sbjct: 370 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 419

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 420 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 477

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              G     K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 478 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 524


>gi|5058999|gb|AAD38869.1|AF057146_1 putative deubiquitinating enzyme UBPY [Mus musculus]
          Length = 1080

 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 119/283 (42%), Gaps = 33/283 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 740 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 793

Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
              K      L  G  R  SP  F+  +         S      Q+D+QE L F+MD +H
Sbjct: 794 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 843

Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           ++L K           N  L  L A E  W+     N+S +             +F GQ 
Sbjct: 844 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVA-----------LFQGQF 892

Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
           KS V+     + S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 893 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 952

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 953 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 995


>gi|188528692|ref|NP_004196.4| ubiquitin carboxyl-terminal hydrolase 2 isoform a [Homo sapiens]
 gi|20141855|sp|O75604.2|UBP2_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
           Full=41 kDa ubiquitin-specific protease; AltName:
           Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
           thioesterase 2; AltName:
           Full=Ubiquitin-specific-processing protease 2
 gi|12804005|gb|AAH02854.1| Ubiquitin specific peptidase 2 [Homo sapiens]
 gi|12804195|gb|AAH02955.1| Ubiquitin specific peptidase 2 [Homo sapiens]
 gi|119587889|gb|EAW67485.1| ubiquitin specific peptidase 2, isoform CRA_b [Homo sapiens]
 gi|123983451|gb|ABM83458.1| ubiquitin specific peptidase 2 [synthetic construct]
 gi|167887743|gb|ACA06097.1| ubiquitin carboxyl-terminal hydrolase 2 variant 1 [Homo sapiens]
          Length = 605

 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 123/287 (42%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+         A    V +F     
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 318

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 319 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 369

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++     S    N   +    +DE      K +    +      S + D+F GQL
Sbjct: 370 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 419

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 420 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 477

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              G     K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 478 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 524


>gi|148696216|gb|EDL28163.1| ubiquitin specific peptidase 8, isoform CRA_a [Mus musculus]
          Length = 1108

 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 119/283 (42%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 768  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 821

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +         S      Q+D+QE L F+MD +H
Sbjct: 822  IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 871

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L  L A E  W+     N+S +             +F GQ 
Sbjct: 872  EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIV-----------ALFQGQF 920

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+     + S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 921  KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 980

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 981  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1023


>gi|60552608|gb|AAH90946.1| Ubiquitin specific peptidase 21 [Homo sapiens]
          Length = 565

 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 134/303 (44%), Gaps = 47/303 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313

Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
           H E+ + +G       AN  + S       L EE E       N   K  + R      S
Sbjct: 314 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 368

Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
            + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E 
Sbjct: 369 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 428

Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 480
           LE             T + K + +Q   +IL+LHL RFS  S+GS K     V FPLQ L
Sbjct: 429 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRL 487

Query: 481 VLG 483
            LG
Sbjct: 488 SLG 490


>gi|426370762|ref|XP_004052330.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Gorilla gorilla
           gorilla]
          Length = 355

 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 123/287 (42%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+         A    V +F     
Sbjct: 25  GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 75

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 76  ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 126

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++     S    N   +    +DE      K +    +      S + D+F GQL
Sbjct: 127 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 176

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 177 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 234

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              G     K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 235 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 281


>gi|6573163|gb|AAF17574.1| ubiquitin specific processing protease [Rattus norvegicus]
          Length = 618

 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 127/287 (44%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+   G+ T +A    + +F     
Sbjct: 281 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 331

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 332 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 382

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++         +  +L  L +E+       K +    +      S + D+F GQL
Sbjct: 383 HNEVNRVAARP---KPSPESLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 432

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 433 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 490

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                    K   +Q   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 491 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 537


>gi|126326536|ref|XP_001370349.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 1
           [Monodelphis domestica]
          Length = 600

 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 124/284 (43%), Gaps = 34/284 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+  + +    A    + +F     
Sbjct: 263 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLNSSSH----AHTALMEEF----- 313

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
            +   + I         SPS F+  ++ F P           Q+DAQEFL F++D +H+E
Sbjct: 314 -AKLIQTIWTSSANDVVSPSEFKTQIQRFAPRFVGY-----NQQDAQEFLRFLLDGLHNE 367

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
           + ++     S N  N  L  L +E+       K +    +      S + D+F GQLKS 
Sbjct: 368 VNRVTVRPKS-NPEN--LDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQLKSS 417

Query: 382 VKA-QGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSSTGNA 435
           +   +    S    PF  L L I    Y E   T+ D +RLF+  + L+G  + +     
Sbjct: 418 LTCTECGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCCRCR 475

Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                 K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 476 ARKRCIKKFSIQKFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 519


>gi|430800750|pdb|3V6C|A Chain A, Crystal Structure Of Usp2 In Complex With Mutated
           Ubiquitin
 gi|430800752|pdb|3V6E|A Chain A, Crystal Structure Of Usp2 And A Mutant Form Of Ubiquitin
          Length = 367

 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 132/306 (43%), Gaps = 44/306 (14%)

Query: 184 VPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAG 242
           VP  ++N   KS + L   GL N GN CF+N+ LQ L +        LQ L  RD+    
Sbjct: 15  VPRGSMNS--KSAQGLA--GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS 70

Query: 243 YPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSIS 299
                A    V +F          K I  +    P    SPS F+  ++ + P       
Sbjct: 71  ----NAHTALVEEF---------AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-- 115

Query: 300 GRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAV 359
               Q+DAQEFL F++D +H+E+ ++     S    N   +    +DE      K +   
Sbjct: 116 ---NQQDAQEFLRFLLDGLHNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMW 162

Query: 360 TRTQSFLPSALSDIFGGQLKSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDA 414
            +      S + D+F GQLKS +        +TV  PF  L L I    Y E   T+ D 
Sbjct: 163 RKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDC 220

Query: 415 LRLFSAPENLEG-YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKS 473
           +RLF+  + L+G  + +     G     K   IQ   KIL+LHL RFS     ++KL   
Sbjct: 221 MRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTF 280

Query: 474 VRFPLQ 479
           V FPL+
Sbjct: 281 VNFPLR 286


>gi|395520122|ref|XP_003764186.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Sarcophilus
           harrisii]
          Length = 599

 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 124/284 (43%), Gaps = 34/284 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+  + +    A    + +F     
Sbjct: 262 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLNSSSH----AHTALMEEF----- 312

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
            +   + I         SPS F+  ++ F P           Q+DAQEFL F++D +H+E
Sbjct: 313 -AKLIQTIWTSSANDVVSPSEFKTQIQRFAPRFVGY-----NQQDAQEFLRFLLDGLHNE 366

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
           + ++     S N  N  L  L +E+       K +    +      S + D+F GQLKS 
Sbjct: 367 VNRVTVRPKS-NPEN--LDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQLKSS 416

Query: 382 VKA-QGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSSTGNA 435
           +   +    S    PF  L L I    Y E   T+ D +RLF+  + L+G  + +     
Sbjct: 417 LTCTECGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCCRCR 474

Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                 K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 475 ARKRCIKKFSIQKFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 518


>gi|48257066|gb|AAH03130.2| USP21 protein, partial [Homo sapiens]
          Length = 477

 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 134/303 (44%), Gaps = 47/303 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 125 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 183

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 184 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 225

Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
           H E+ + +G       AN  + S       L EE E       N   K  + R      S
Sbjct: 226 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 280

Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
            + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E 
Sbjct: 281 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 340

Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 480
           LE             T + K + +Q   +IL+LHL RFS  S+GS K     V FPLQ L
Sbjct: 341 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRL 399

Query: 481 VLG 483
            LG
Sbjct: 400 SLG 402


>gi|62243586|ref|NP_001014443.1| ubiquitin carboxyl-terminal hydrolase 21 [Homo sapiens]
 gi|74027267|ref|NP_036607.3| ubiquitin carboxyl-terminal hydrolase 21 [Homo sapiens]
 gi|10720334|sp|Q9UK80.1|UBP21_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
           Full=Deubiquitinating enzyme 21; AltName: Full=Ubiquitin
           thioesterase 21; AltName:
           Full=Ubiquitin-specific-processing protease 21
 gi|5853113|gb|AAD54321.1|AF177758_1 ubiquitin specific protease 16 [Homo sapiens]
 gi|119573029|gb|EAW52644.1| ubiquitin specific peptidase 21, isoform CRA_c [Homo sapiens]
 gi|158258070|dbj|BAF85008.1| unnamed protein product [Homo sapiens]
 gi|223460370|gb|AAI36292.1| Ubiquitin specific peptidase 21 [Homo sapiens]
          Length = 565

 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 134/303 (44%), Gaps = 47/303 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313

Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
           H E+ + +G       AN  + S       L EE E       N   K  + R      S
Sbjct: 314 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 368

Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
            + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E 
Sbjct: 369 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 428

Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 480
           LE             T + K + +Q   +IL+LHL RFS  S+GS K     V FPLQ L
Sbjct: 429 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRL 487

Query: 481 VLG 483
            LG
Sbjct: 488 SLG 490


>gi|355558658|gb|EHH15438.1| hypothetical protein EGK_01528 [Macaca mulatta]
 gi|355745834|gb|EHH50459.1| hypothetical protein EGM_01292 [Macaca fascicularis]
 gi|380811730|gb|AFE77740.1| ubiquitin carboxyl-terminal hydrolase 21 [Macaca mulatta]
 gi|383417519|gb|AFH31973.1| ubiquitin carboxyl-terminal hydrolase 21 [Macaca mulatta]
 gi|384946444|gb|AFI36827.1| ubiquitin carboxyl-terminal hydrolase 21 [Macaca mulatta]
 gi|410219870|gb|JAA07154.1| ubiquitin specific peptidase 21 [Pan troglodytes]
 gi|410219872|gb|JAA07155.1| ubiquitin specific peptidase 21 [Pan troglodytes]
 gi|410302294|gb|JAA29747.1| ubiquitin specific peptidase 21 [Pan troglodytes]
 gi|410351841|gb|JAA42524.1| ubiquitin specific peptidase 21 [Pan troglodytes]
          Length = 565

 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 134/303 (44%), Gaps = 47/303 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313

Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
           H E+ + +G       AN  + S       L EE E       N   K  + R      S
Sbjct: 314 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 368

Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
            + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E 
Sbjct: 369 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 428

Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 480
           LE             T + K + +Q   +IL+LHL RFS  S+GS K     V FPLQ L
Sbjct: 429 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRL 487

Query: 481 VLG 483
            LG
Sbjct: 488 SLG 490


>gi|51592088|ref|NP_446226.2| ubiquitin carboxyl-terminal hydrolase 2 [Rattus norvegicus]
 gi|6492126|gb|AAF14190.1|AF106659_1 deubiquitinating enzyme Ubp69 [Rattus norvegicus]
          Length = 618

 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 127/287 (44%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+   G+ T +A    + +F     
Sbjct: 281 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 331

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 332 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 382

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++         +  +L  L +E+       K +    +      S + D+F GQL
Sbjct: 383 HNEVNRVAARP---KPSPESLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 432

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 433 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 490

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                    K   +Q   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 491 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 537


>gi|28972047|dbj|BAC65477.1| mKIAA0055 protein [Mus musculus]
          Length = 1108

 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 119/283 (42%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 768  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 821

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +         S      Q+D+QE L F+MD +H
Sbjct: 822  IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 871

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L  L A E  W+     N+S +             +F GQ 
Sbjct: 872  EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIV-----------ALFQGQF 920

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+     + S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 921  KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 980

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 981  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1023


>gi|355728146|gb|AES09431.1| ubiquitin specific peptidase 8 [Mustela putorius furo]
          Length = 487

 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 147 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 200

Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
              K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 201 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 250

Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 251 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIV-----------ALFQGQF 299

Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
           KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 300 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRT 359

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 360 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 402


>gi|148693613|gb|EDL25560.1| ubiquitin specific peptidase 2, isoform CRA_a [Mus musculus]
          Length = 411

 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 126/287 (43%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+   G+ T +A    + +F     
Sbjct: 74  GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 124

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 125 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFMGY-----NQQDAQEFLRFLLDGL 175

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++         +   L  L +E+       K +    +      S + D+F GQL
Sbjct: 176 HNEVNRVAARP---KASPETLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 225

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 226 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDGDEKPTCC 283

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                    K   +Q   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 284 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 330


>gi|149759807|ref|XP_001503883.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 2
           [Equus caballus]
 gi|149759809|ref|XP_001503880.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 1
           [Equus caballus]
          Length = 565

 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 99/303 (32%), Positives = 134/303 (44%), Gaps = 47/303 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313

Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
           H E+ + +G       AN+   S       L EE E       N   K  + R      S
Sbjct: 314 HLEINR-RGRRAPPILANSPAPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 368

Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
            + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E 
Sbjct: 369 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEE 428

Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 480
           LE             T + K + +Q   +IL+LHL RFS  S+GS K     V FPLQ L
Sbjct: 429 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSIGVDFPLQRL 487

Query: 481 VLG 483
            LG
Sbjct: 488 SLG 490


>gi|27371223|gb|AAH41366.1| USP2 protein [Homo sapiens]
 gi|119587890|gb|EAW67486.1| ubiquitin specific peptidase 2, isoform CRA_c [Homo sapiens]
          Length = 362

 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 123/287 (42%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+         A    V +F     
Sbjct: 25  GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 75

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 76  ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 126

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++     S    N   +    +DE      K +    +      S + D+F GQL
Sbjct: 127 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 176

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 177 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 234

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              G     K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 235 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 281


>gi|3386550|gb|AAC28392.1| ubiquitin-specific protease UBP41 [Homo sapiens]
          Length = 353

 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 123/287 (42%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+         A    V +F     
Sbjct: 16  GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 66

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 67  ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 117

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++     S    N   +    +DE      K +    +      S + D+F GQL
Sbjct: 118 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 167

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 168 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 225

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              G     K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 226 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 272


>gi|81883550|sp|Q5U349.1|UBP2_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
           Full=41 kDa ubiquitin-specific protease; AltName:
           Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
           thioesterase 2; AltName:
           Full=Ubiquitin-specific-processing protease 2; AltName:
           Full=Ubiquitin-specific-processing protease testis;
           Short=UBP-t
 gi|55250569|gb|AAH85719.1| Ubiquitin specific peptidase 2 [Rattus norvegicus]
 gi|149041433|gb|EDL95274.1| ubiquitin specific peptidase 2, isoform CRA_a [Rattus norvegicus]
 gi|149041435|gb|EDL95276.1| ubiquitin specific peptidase 2, isoform CRA_a [Rattus norvegicus]
          Length = 618

 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 127/287 (44%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+   G+ T +A    + +F     
Sbjct: 281 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 331

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 332 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 382

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++         +  +L  L +E+       K +    +      S + D+F GQL
Sbjct: 383 HNEVNRVAARP---KPSPESLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 432

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 433 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 490

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                    K   +Q   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 491 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 537


>gi|53987037|gb|AAV27298.1| poly-histidine-tagged Usp2-cc [Ubiquitin protease vector pHUsp2-cc]
          Length = 378

 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 126/287 (43%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+   G+ T +A    + +F     
Sbjct: 41  GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 91

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 92  ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFMGY-----NQQDAQEFLRFLLDGL 142

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++         +   L  L +E+       K +    +      S + D+F GQL
Sbjct: 143 HNEVNRVAARP---KASPETLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 192

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 193 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDGDEKPTCC 250

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                    K   +Q   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 251 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 297


>gi|344313155|ref|NP_001230688.1| ubiquitin carboxyl-terminal hydrolase 2 isoform c [Homo sapiens]
          Length = 362

 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 123/287 (42%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+         A    V +F     
Sbjct: 25  GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 75

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 76  ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 126

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++     S    N   +    +DE      K +    +      S + D+F GQL
Sbjct: 127 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 176

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 177 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 234

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              G     K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 235 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 281


>gi|432101254|gb|ELK29492.1| Ubiquitin carboxyl-terminal hydrolase 21 [Myotis davidii]
          Length = 663

 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 135/302 (44%), Gaps = 45/302 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313

Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKNKSAVTRTQSFLP---SA 369
           H E+ +    +  I  ++ A        +L EE +       N  A    + +L    S 
Sbjct: 314 HLEINRRGRRAPPILASSPAPSPPHRGGALLEEPDLS----DNDRANLMWKRYLEREDSK 369

Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
           + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 429

Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 481
           E             T + K + +Q   +IL+LHL RFS  S+GS K     V FPLQ L 
Sbjct: 430 ESENAPVCDRCQQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRLS 488

Query: 482 LG 483
           LG
Sbjct: 489 LG 490


>gi|114052120|ref|NP_001039841.1| ubiquitin carboxyl-terminal hydrolase 21 [Bos taurus]
 gi|122136171|sp|Q2KJ72.1|UBP21_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
           Full=Deubiquitinating enzyme 21; AltName: Full=Ubiquitin
           thioesterase 21; AltName:
           Full=Ubiquitin-specific-processing protease 21
 gi|86821766|gb|AAI05489.1| Ubiquitin specific peptidase 21 [Bos taurus]
          Length = 565

 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 134/302 (44%), Gaps = 45/302 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 213 GLRNLGNTCFLNALLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313

Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
           H E+ +    +  I  ++ A        +L EE E       N   K  + R      S 
Sbjct: 314 HLEINRRGRRAPPILASSPAPHPPRLGGALLEEPELSDDDRANLMWKRYLERED----SK 369

Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
           + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEEL 429

Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 481
           E             T + K + +Q   +IL+LHL RFS  S+GS K     V FPLQ L 
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRLS 488

Query: 482 LG 483
           LG
Sbjct: 489 LG 490


>gi|395822737|ref|XP_003784667.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Otolemur
            garnettii]
          Length = 1087

 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 747  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 800

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 801  IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 850

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 851  EDLNKADNRKRHKEENNDHLDDFKAAEQAWQKHKQLNESIIVA-----------LFQGQF 899

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 900  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 959

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 960  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1002


>gi|291234105|ref|XP_002736998.1| PREDICTED: deubiquitinating enzyme 1-like [Saccoglossus
           kowalevskii]
          Length = 349

 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 124/284 (43%), Gaps = 49/284 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF    + L  R  PK     LT      ++       
Sbjct: 25  GLVNFGNTCYCNSVLQALYFCKPFRD--KVLAYRAQPKKKETLLTCLADLFNNI------ 76

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +S+KK + V+      +P  F A L+       N +     Q+DA EFL+++++ + D L
Sbjct: 77  ASQKKKVGVI------APKKFIARLRK-----ENELFDNYMQQDAHEFLNYLLNTIADLL 125

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
              +      NG +              + P+            P+ + DIF G L +  
Sbjct: 126 QAEKQGGKPKNGNDNQ------------IKPE------------PTWVHDIFQGTLTNET 161

Query: 383 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +    +A S+  + FL L +D+  +   +I   LR FS+ E L   Y+           A
Sbjct: 162 RCLCCEAVSSKDEDFLDLSVDV--DQNTSITHCLRGFSSTETLCSEYKYYCENCCSKQEA 219

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
           +K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 220 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 263


>gi|28565285|ref|NP_741994.1| ubiquitin carboxyl-terminal hydrolase 2 isoform b [Homo sapiens]
 gi|410045962|ref|XP_003952100.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Pan
           troglodytes]
 gi|24943173|gb|AAN65363.1|AF440755_1 ubiquitin specific protease 2b [Homo sapiens]
 gi|119587888|gb|EAW67484.1| ubiquitin specific peptidase 2, isoform CRA_a [Homo sapiens]
 gi|158257942|dbj|BAF84944.1| unnamed protein product [Homo sapiens]
 gi|167887742|gb|ACA06096.1| ubiquitin carboxyl-terminal hydrolase 2 variant 2 [Homo sapiens]
          Length = 396

 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 123/287 (42%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+         A    V +F     
Sbjct: 59  GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 109

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 110 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 160

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++     S    N   +    +DE      K +    +      S + D+F GQL
Sbjct: 161 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 210

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 211 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 268

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              G     K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 269 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 315


>gi|3386552|gb|AAC28393.1| ubiquitin-specific protease UBP41 [Mus musculus]
          Length = 353

 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 126/287 (43%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+   G+ T +A    + +F     
Sbjct: 16  GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 66

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 67  ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFMGY-----NQQDAQEFLRFLLDGL 117

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++         +   L  L +E+       K +    +      S + D+F GQL
Sbjct: 118 HNEVNRVAARP---KASPETLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 167

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 168 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDGDEKPTCC 225

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                    K   +Q   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 226 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 272


>gi|114794332|pdb|2HD5|A Chain A, Usp2 In Complex With Ubiquitin
          Length = 359

 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 123/287 (42%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+         A    V +F     
Sbjct: 11  GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 61

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 62  ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 112

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++     S    N   +    +DE      K +    +      S + D+F GQL
Sbjct: 113 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 162

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 163 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 220

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              G     K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 221 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 267


>gi|7670525|dbj|BAA95110.1| unnamed protein product [Mus musculus]
          Length = 393

 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 126/287 (43%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+   G+ T +A    + +F     
Sbjct: 56  GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 106

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 107 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFMGY-----NQQDAQEFLRFLLDGL 157

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++         +   L  L +E+       K +    +      S + D+F GQL
Sbjct: 158 HNEVNRVAARP---KASPETLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 207

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 208 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDGDEKPTCC 265

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                    K   +Q   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 266 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 312


>gi|37674279|ref|NP_932759.1| ubiquitin carboxyl-terminal hydrolase 2 isoform Usp2-45 [Mus
           musculus]
 gi|34874871|gb|AAQ83301.1| deubiquitinating enzyme Usp2-45 [Mus musculus]
 gi|148693614|gb|EDL25561.1| ubiquitin specific peptidase 2, isoform CRA_b [Mus musculus]
          Length = 396

 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 126/287 (43%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+   G+ T +A    + +F     
Sbjct: 59  GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 109

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 110 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFMGY-----NQQDAQEFLRFLLDGL 160

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++         +   L  L +E+       K +    +      S + D+F GQL
Sbjct: 161 HNEVNRVAARP---KASPETLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 210

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 211 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDGDEKPTCC 268

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                    K   +Q   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 269 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 315


>gi|118138325|pdb|2IBI|A Chain A, Covalent Ubiquitin-Usp2 Complex
          Length = 374

 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 121/287 (42%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+         A    V +F     
Sbjct: 37  GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 87

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 88  ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 138

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++     S    N   +    +DE      K +    +      S + D+F GQL
Sbjct: 139 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 188

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G    +  
Sbjct: 189 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDAAPTCC 246

Query: 434 NAGVVTAK-KSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                    K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 247 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 293


>gi|388454150|ref|NP_001252825.1| ubiquitin carboxyl-terminal hydrolase 2 [Macaca mulatta]
 gi|355567137|gb|EHH23516.1| hypothetical protein EGK_06991 [Macaca mulatta]
 gi|355752713|gb|EHH56833.1| hypothetical protein EGM_06315 [Macaca fascicularis]
 gi|380789853|gb|AFE66802.1| ubiquitin carboxyl-terminal hydrolase 2 isoform a [Macaca mulatta]
          Length = 605

 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 124/287 (43%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+  +      A    + +F     
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHSS----NAHTALMEEF----- 318

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 319 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 369

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++     S    N   +    +DE      K +    +      S + D+F GQL
Sbjct: 370 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 419

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 420 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 477

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              G     K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 478 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 524


>gi|402895527|ref|XP_003910877.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Papio anubis]
          Length = 605

 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 124/287 (43%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+  +      A    + +F     
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHSS----NAHTALMEEF----- 318

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 319 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 369

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++     S    N   +    +DE      K +    +      S + D+F GQL
Sbjct: 370 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 419

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 420 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 477

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              G     K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 478 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 524


>gi|153792416|ref|NP_001093229.1| ubiquitin carboxyl-terminal hydrolase 3 [Equus caballus]
 gi|148529824|gb|ABQ82144.1| ubiquitin specific peptidase 3 [Equus caballus]
          Length = 520

 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 143/322 (44%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+   T+ P NK  +   
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSPSNKCCINGA 306

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 307 S----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 362

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEP 444


>gi|417402232|gb|JAA47969.1| Putative ubiquitin carboxyl-terminal hydrolase 3 [Desmodus
           rotundus]
          Length = 520

 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 145/324 (44%), Gaps = 59/324 (18%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+   T+   NK  +   
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSASNKCCINGA 306

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 307 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 362

Query: 410 TIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQG 466
           ++ D LR F+  E L+   T           +KS K   IQ L K+L LHL RF + +  
Sbjct: 363 SLRDCLRSFTDLEELD--ETELYMCHKCRKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYL 420

Query: 467 STKLHKSVRFPLQLVLGRDLLVTP 490
             K+   V FPL+ +  +  L+ P
Sbjct: 421 RNKVDTYVEFPLRGLDMKCYLLEP 444


>gi|441615298|ref|XP_004088287.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Nomascus
           leucogenys]
          Length = 1011

 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 671 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 724

Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
              K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 725 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 774

Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 775 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 823

Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
           KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 824 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 883

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 884 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 926


>gi|348574069|ref|XP_003472813.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 2
           [Cavia porcellus]
          Length = 396

 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 126/287 (43%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+      T +   G + +F     
Sbjct: 59  GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSH----TSSVHTGLMEEF----- 109

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 110 ----AKLIQTIWTSCPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 160

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++     S   ++  L  L +++       K +    +      S + D+F GQL
Sbjct: 161 HNEVNRVAVRPKS---SHENLDHLPDDE-------KGRQMWRKYLEREDSRIGDLFVGQL 210

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 211 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDGDEKPTCC 268

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                    K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 269 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLSTFVNFPLR 315


>gi|397515262|ref|XP_003827873.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Pan paniscus]
          Length = 899

 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 559 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 612

Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
              K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 613 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 662

Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 663 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 711

Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
           KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 712 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 771

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 772 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 814


>gi|441644453|ref|XP_003253547.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Nomascus
           leucogenys]
          Length = 577

 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 123/287 (42%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+         A    + +F     
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALMEEF----- 318

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 319 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 369

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++     S    N   +    +DE      K +    +      S + D+F GQL
Sbjct: 370 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 419

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 420 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 477

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              G     K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 478 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 524


>gi|297696632|ref|XP_002825491.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Pongo
            abelii]
 gi|395746706|ref|XP_002825492.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Pongo
            abelii]
 gi|395746709|ref|XP_003778495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Pongo abelii]
          Length = 1118

 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 778  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 832  IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 881

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 882  EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 931  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 991  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1033


>gi|402874297|ref|XP_003900978.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase
            8 [Papio anubis]
          Length = 1109

 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 769  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 822

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 823  IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 872

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 873  EDLNKADNRKRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 921

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 922  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 981

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 982  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1024


>gi|332235543|ref|XP_003266963.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1
            [Nomascus leucogenys]
 gi|332235545|ref|XP_003266964.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2
            [Nomascus leucogenys]
 gi|332235547|ref|XP_003266965.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 3
            [Nomascus leucogenys]
          Length = 1117

 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 777  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 830

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 831  IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 880

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 881  EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 929

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 930  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 989

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 990  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1032


>gi|260832998|ref|XP_002611444.1| hypothetical protein BRAFLDRAFT_63924 [Branchiostoma floridae]
 gi|229296815|gb|EEN67454.1| hypothetical protein BRAFLDRAFT_63924 [Branchiostoma floridae]
          Length = 349

 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 49/284 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + + + + +  PK     LT         D     
Sbjct: 25  GLVNFGNTCYCNSVLQALYFCRPFREKVLQYKAQ--PKKKETLLTCLS------DLFHSI 76

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+      +P  F A L+       N +     Q+DA EFL+++++ + D L
Sbjct: 77  ATQKKKVGVI------APKKFIARLRK-----ENELFDNYMQQDAHEFLNYLLNTVADLL 125

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
              + ++  ING +                   KS         P+ + DIF G L +  
Sbjct: 126 QAEKQQAKGINGTDN----------------NTKSD--------PTWVHDIFQGTLTNET 161

Query: 383 KAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +    +  S+  + FL L +D+  +   +I   LR FS  E L   Y+           A
Sbjct: 162 RCLCCETVSSKDEDFLDLSVDV--DQNTSITHCLRGFSNTETLCSEYKYYCEMCCSKQEA 219

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
           +K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 220 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 263


>gi|291403018|ref|XP_002717847.1| PREDICTED: ubiquitin specific peptidase 8 [Oryctolagus cuniculus]
          Length = 1088

 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 121/283 (42%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 748  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 801

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +        +  +G   Q+D+QE L F+MD +H
Sbjct: 802  IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 851

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 852  EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 900

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 901  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 960

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 961  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1003


>gi|40789062|dbj|BAA06225.2| KIAA0055 [Homo sapiens]
          Length = 1120

 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 780  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 833

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 834  IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 883

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 884  EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 932

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 933  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 992

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 993  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1035


>gi|403274278|ref|XP_003928908.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 1012

 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 672 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 725

Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
              K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 726 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 775

Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 776 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 824

Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
           KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 825 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 884

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 885 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 927


>gi|355692711|gb|EHH27314.1| Ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
          Length = 1118

 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 778  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 832  IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 881

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 882  EDLNKADNRKRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 931  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 991  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1033


>gi|114657016|ref|XP_001168761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 6 [Pan
            troglodytes]
 gi|114657018|ref|XP_001168786.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 7 [Pan
            troglodytes]
 gi|332843784|ref|XP_001168674.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Pan
            troglodytes]
 gi|410355753|gb|JAA44480.1| ubiquitin specific peptidase 8 [Pan troglodytes]
 gi|410355755|gb|JAA44481.1| ubiquitin specific peptidase 8 [Pan troglodytes]
 gi|410355757|gb|JAA44482.1| ubiquitin specific peptidase 8 [Pan troglodytes]
 gi|410355759|gb|JAA44483.1| ubiquitin specific peptidase 8 [Pan troglodytes]
          Length = 1118

 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 778  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 832  IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 881

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 882  EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 931  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 991  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1033


>gi|296213993|ref|XP_002753525.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2
            [Callithrix jacchus]
          Length = 1118

 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 778  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 832  IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 881

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 882  EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 931  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 991  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1033


>gi|190684690|ref|NP_005145.3| ubiquitin carboxyl-terminal hydrolase 8 [Homo sapiens]
 gi|190684692|ref|NP_001122082.1| ubiquitin carboxyl-terminal hydrolase 8 [Homo sapiens]
 gi|190684694|ref|NP_001122083.1| ubiquitin carboxyl-terminal hydrolase 8 [Homo sapiens]
 gi|731046|sp|P40818.1|UBP8_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 8; AltName:
            Full=Deubiquitinating enzyme 8; AltName: Full=Ubiquitin
            isopeptidase Y; Short=hUBPy; AltName: Full=Ubiquitin
            thioesterase 8; AltName:
            Full=Ubiquitin-specific-processing protease 8
 gi|83405557|gb|AAI10591.1| Ubiquitin specific peptidase 8 [Homo sapiens]
 gi|119597805|gb|EAW77399.1| ubiquitin specific peptidase 8, isoform CRA_a [Homo sapiens]
 gi|119597806|gb|EAW77400.1| ubiquitin specific peptidase 8, isoform CRA_a [Homo sapiens]
 gi|119597807|gb|EAW77401.1| ubiquitin specific peptidase 8, isoform CRA_a [Homo sapiens]
 gi|168278493|dbj|BAG11126.1| ubiquitin carboxyl-terminal hydrolase 8 [synthetic construct]
          Length = 1118

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 778  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 832  IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 881

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 882  EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 931  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 991  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1033


>gi|355778036|gb|EHH63072.1| Ubiquitin carboxyl-terminal hydrolase 8 [Macaca fascicularis]
 gi|383422691|gb|AFH34559.1| ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
          Length = 1118

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 778  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 832  IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 881

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 882  EDLNKADNRKRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 931  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 991  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1033


>gi|194383128|dbj|BAG59120.1| unnamed protein product [Homo sapiens]
          Length = 1012

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 672 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 725

Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
              K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 726 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 775

Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 776 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 824

Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
           KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 825 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 884

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 885 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 927


>gi|388453897|ref|NP_001252548.1| ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
 gi|387273381|gb|AFJ70185.1| ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
          Length = 1118

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 778  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 832  IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 881

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 882  EDLNKADNRKRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 931  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 991  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1033


>gi|348504876|ref|XP_003439987.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like
           [Oreochromis niloticus]
          Length = 369

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 127/287 (44%), Gaps = 44/287 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  A        D     
Sbjct: 36  GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 87

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D +
Sbjct: 88  ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTVAD-I 135

Query: 323 LKLQGESTSINGA---NTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
           L+ + +    NG    N  +V+   E E       NK+         P+ + DIF G L 
Sbjct: 136 LQEEKKQEKQNGRLKNNGTVVTTEAETE-------NKTE--------PTWVHDIFQGTLT 180

Query: 380 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGV 437
           +  +       S+  + FL L +D+  E   +I   LR FS  E L   Y+         
Sbjct: 181 NETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEYKYYCETCCSK 238

Query: 438 VTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
             A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 239 QEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 285


>gi|194034734|ref|XP_001927765.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Sus scrofa]
          Length = 1117

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 777  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQEDINRSN------LLGHKGEVAEEFG 830

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 831  IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 880

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 881  EDLNKADNRKRHKEENNDHLDDFKAAEYAWQKHKQLNESIIVA-----------LFQGQF 929

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 930  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 989

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 990  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1032


>gi|296213995|ref|XP_002753526.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 3
           [Callithrix jacchus]
          Length = 1012

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 121/283 (42%), Gaps = 33/283 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 672 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 725

Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
              K      L  G  R  SP  F+  +        +  +G   Q+D+QE L F+MD +H
Sbjct: 726 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 775

Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 776 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 824

Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
           KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 825 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 884

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 885 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 927


>gi|380817804|gb|AFE80776.1| ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
          Length = 1118

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 778  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 832  IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 881

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 882  EDLNKADNRKRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 931  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 991  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1033


>gi|158258232|dbj|BAF85089.1| unnamed protein product [Homo sapiens]
          Length = 1118

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 778  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 832  IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 881

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 882  EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 931  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 991  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1033


>gi|426233324|ref|XP_004010667.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Ovis
           aries]
          Length = 1009

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 669 GLRNLGNTCYMNSILQCLCNTPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 722

Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
              K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 723 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 772

Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 773 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 821

Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
           KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 822 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 881

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 882 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 924


>gi|426379059|ref|XP_004056223.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Gorilla gorilla
            gorilla]
          Length = 1118

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 778  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 832  IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 881

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 882  EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 931  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 991  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1033


>gi|449268039|gb|EMC78912.1| Ubiquitin carboxyl-terminal hydrolase 8 [Columba livia]
          Length = 1110

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 131/301 (43%), Gaps = 33/301 (10%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         + L   DI ++       F+G   +     G
Sbjct: 770  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNLYQDDINRSN------FLGHKGEVAEEFG 823

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  +  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 824  VIMK-----ALWTGQYKYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 873

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L  L A E  W      N+S +             +F GQ 
Sbjct: 874  EDLNKADNRKRYKEENNDHLDDLRAAELAWHKHKQLNESIIV-----------ALFQGQF 922

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T+++ LRLFS  E L +  R   +    
Sbjct: 923  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQECLRLFSKEEKLTDNNRFYCSHCKT 982

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+ +     ++ P   + +
Sbjct: 983  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLETLDLSQYVIGPKNNLKR 1042

Query: 497  F 497
            +
Sbjct: 1043 Y 1043


>gi|426216989|ref|XP_004002736.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 2 [Ovis
           aries]
          Length = 592

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 132/309 (42%), Gaps = 59/309 (19%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 240 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 298

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 299 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 340

Query: 319 HDELLKLQGESTSI------------NGANTALVSLAEEDE----WETVGPKNKSAVTRT 362
           H E+ +    +  I             GA      L+++D     W+    +  S +   
Sbjct: 341 HLEINRRGRRAPPILASSPAPPPPRLGGALLEEPELSDDDRANLMWKRYLEREDSKIV-- 398

Query: 363 QSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRL 417
                    D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   L
Sbjct: 399 ---------DLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNL 449

Query: 418 FSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVR 475
           F+  E LE             T + K + +Q   +IL+LHL RFS  S+GS K     V 
Sbjct: 450 FTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVD 508

Query: 476 FPLQ-LVLG 483
           FPLQ L LG
Sbjct: 509 FPLQRLSLG 517


>gi|7363366|gb|AAF61308.1|AF233442_1 NEDD8-specific protease [Homo sapiens]
          Length = 381

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 132/308 (42%), Gaps = 57/308 (18%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL N GN CFLNA LQ L S  P       LR RD  +                + P GG
Sbjct: 29  GLRNLGNTCFLNAVLQCLSSTRPLRDFC--LR-RDFRQ----------------EVPGGG 69

Query: 263 SSKKKN---------ISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 313
            +++           +  LD     +P+ F AV + + P    S SG   Q+DAQEFL  
Sbjct: 70  RAQELTEAFADVIGALWHLDSCEAVNPTRFRAVFQKYVP----SFSGYS-QQDAQEFLKL 124

Query: 314 IMDQMHDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQ 363
           +M+++H E+ + +G       AN  + S       L EE E       N   K  + R  
Sbjct: 125 LMERLHLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED 183

Query: 364 SFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLF 418
               S + D+F GQLKS +K Q     S T + F  L L I    ++     + D   LF
Sbjct: 184 ----SKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVFLRDCFNLF 239

Query: 419 SAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRF 476
           +  E LE             T + K + +Q   +IL+LHL RFS  S+GS K     V F
Sbjct: 240 TKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDF 298

Query: 477 PLQ-LVLG 483
           PLQ L LG
Sbjct: 299 PLQRLSLG 306


>gi|403274276|ref|XP_003928907.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Saimiri
            boliviensis boliviensis]
          Length = 1118

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 778  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 832  IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 881

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 882  EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 931  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 991  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1033


>gi|332843788|ref|XP_001168540.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Pan
           troglodytes]
          Length = 1012

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 672 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 725

Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
              K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 726 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 775

Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 776 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 824

Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
           KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 825 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 884

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 885 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 927


>gi|426233322|ref|XP_004010666.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Ovis
            aries]
          Length = 1086

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 746  GLRNLGNTCYMNSILQCLCNTPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 799

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 800  IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 849

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 850  EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 898

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 899  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 958

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 959  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1001


>gi|417411771|gb|JAA52312.1| Putative ubiquitin carboxyl-terminal hydrolase 21, partial
           [Desmodus rotundus]
          Length = 583

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 129/308 (41%), Gaps = 57/308 (18%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 231 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 289

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 290 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 331

Query: 319 HDELLKLQGESTSI------------NGANTALVSLAEEDE----WETVGPKNKSAVTRT 362
           H E+ +    + +I             GA      L+++D     W+    +  S +   
Sbjct: 332 HLEINRRGRRAPAILANSPAPSAPRRGGALLEEPDLSDDDRANLMWKRYLEREDSKIV-- 389

Query: 363 QSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRL 417
                    D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   L
Sbjct: 390 ---------DLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSL 440

Query: 418 FSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRF 476
           F+  E LE             T + K + +Q   +IL+LHL RFS       K    V F
Sbjct: 441 FTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDF 500

Query: 477 PLQ-LVLG 483
           PLQ L LG
Sbjct: 501 PLQRLSLG 508


>gi|338716960|ref|XP_003363554.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Equus caballus]
          Length = 1011

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 121/283 (42%), Gaps = 33/283 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 671 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 724

Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
              K      L  G  R  SP  F+  +        +  +G   Q+D+QE L F+MD +H
Sbjct: 725 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 774

Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 775 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 823

Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
           KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 824 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 883

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 884 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 926


>gi|311264080|ref|XP_003129987.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 1
           [Sus scrofa]
          Length = 606

 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 125/287 (43%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+  +     +A    + +F     
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSS----SAHTALMEEF----- 319

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++     S   +   L  L +++       K +    +      S + D+F GQL
Sbjct: 371 HNEVNRVTVRPKS---SPEGLDHLPDDE-------KGRQMWRKYLEREDSRIGDLFVGQL 420

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 478

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                    K   +Q   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 479 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 525


>gi|417405916|gb|JAA49648.1| Putative ubiquitin carboxyl-terminal hydrolase 8 [Desmodus rotundus]
          Length = 1116

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 776  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 829

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 830  IIMK-----ALWTGQYRYISPKDFKTTIGK----INDQFAGY-SQQDSQELLLFLMDGLH 879

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 880  EDLNKADNRKRHKEENNDHLDDFKAAEYAWQKHKQLNESIIVA-----------LFQGQF 928

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 929  KSTVQCLTCHKRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 988

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 989  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1031


>gi|351715023|gb|EHB17942.1| Ubiquitin carboxyl-terminal hydrolase 8 [Heterocephalus glaber]
          Length = 1106

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 766  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNYYQDDINRSN------LLGHKGEVAEEFG 819

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 820  IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 869

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 870  EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 918

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    ++ S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 919  KSTVQCLTCHRKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 978

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 979  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1021


>gi|149691949|ref|XP_001501973.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Equus
            caballus]
          Length = 1117

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 777  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 830

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 831  IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 880

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 881  EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 929

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 930  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 989

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 990  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1032


>gi|452824642|gb|EME31643.1| ubiquitin carboxyl-terminal hydrolase 36/42 [Galdieria sulphuraria]
          Length = 605

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 118/266 (44%), Gaps = 55/266 (20%)

Query: 202 RGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIP-KAGYPTLTAFVGFVSD-F 256
           +GL N GN CFLNA LQ+L+ C PF   L E       + P  +GY ++ A      + F
Sbjct: 95  KGLRNLGNTCFLNAALQSLLHCPPFATALLEKIFSAASNCPSHSGYCSICAVEKTAQNVF 154

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
            + +   S     S +D+ R       + + +NFTP          RQ DA E++ F++D
Sbjct: 155 SSDTSFQS----YSPVDLVRN-----LKVLSRNFTPG---------RQADAHEYIRFLLD 196

Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
            M+  LL +                           P+ K    R Q  + + + +IFGG
Sbjct: 197 DMNRILLGI---------------------------PRGKLCHDRQQE-MHTLVHEIFGG 228

Query: 377 QLKSVVKAQGNKASA-TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRTSSTGN 434
             +S V  Q   +S+ TV+PFL + LD+  E V T+  AL+ F+ PE L G  R   +  
Sbjct: 229 CYESKVSCQNCGSSSDTVEPFLDVSLDL--EGVSTLAKALKGFTTPERLFGPNRYFCSQC 286

Query: 435 AGVVTAKKSVKIQTLSKILILHLMRF 460
                A K  + + +  + I HL RF
Sbjct: 287 KQRTDASKVFQFRRIPNVFIFHLKRF 312


>gi|410961243|ref|XP_003987193.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Felis
           catus]
          Length = 1010

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 670 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 723

Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
              K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 724 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 773

Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 774 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 822

Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
           KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 823 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRT 882

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 883 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 925


>gi|6492124|gb|AAF14189.1|AF106658_1 deubiquitinating enzyme Ubp45 [Rattus norvegicus]
          Length = 396

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 127/287 (44%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+   G+ T +A    + +F     
Sbjct: 59  GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 109

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 110 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 160

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++         +  +L  L +E+       K +    +      S + D+F GQL
Sbjct: 161 HNEVNRVAARP---KPSPESLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 210

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 211 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 268

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                    K   +Q   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 269 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 315


>gi|224056573|ref|XP_002298917.1| predicted protein [Populus trichocarpa]
 gi|222846175|gb|EEE83722.1| predicted protein [Populus trichocarpa]
          Length = 665

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 117/285 (41%), Gaps = 54/285 (18%)

Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVS 254
           V +L PRGL+N GN C+ NA LQ L    P +  LL+   +R      +  +      V 
Sbjct: 345 VINLTPRGLVNCGNSCYANAVLQCLTCTKPLIIFLLRRSHSRACCGKDWCLMCELEQHV- 403

Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
                         + + + G P SPS     ++     +     G   QEDA EFL  +
Sbjct: 404 --------------MMLRECGGPLSPSRILLHMRKINCQI-----GDGSQEDAHEFLRLL 444

Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
           +  M                 +  L  L  ED+   V P+ +           + +   F
Sbjct: 445 IASMQ----------------SICLERLGGEDK---VDPRLQET---------TFIQHTF 476

Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
           GG L+S VK  + +  S   +  + L L+I+   V ++EDAL  F+ PE L+G      G
Sbjct: 477 GGLLRSKVKCLRCHHESERYENIMDLTLEIFG-WVESLEDALTQFTTPEELDGENMYRCG 535

Query: 434 N-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 477
             A  V A+K + I     IL + L RF  G  G  K++K + FP
Sbjct: 536 RCAAYVRARKQLSIHEAPNILTIVLKRFQEGKYG--KINKCITFP 578


>gi|426216987|ref|XP_004002735.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 1 [Ovis
           aries]
          Length = 565

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 94/309 (30%), Positives = 132/309 (42%), Gaps = 59/309 (19%)

Query: 203 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313

Query: 319 HDELLKLQGESTSI------------NGANTALVSLAEEDE----WETVGPKNKSAVTRT 362
           H E+ +    +  I             GA      L+++D     W+    +  S +   
Sbjct: 314 HLEINRRGRRAPPILASSPAPPPPRLGGALLEEPELSDDDRANLMWKRYLEREDSKIV-- 371

Query: 363 QSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRL 417
                    D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   L
Sbjct: 372 ---------DLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNL 422

Query: 418 FSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVR 475
           F+  E LE             T + K + +Q   +IL+LHL RFS  S+GS K     V 
Sbjct: 423 FTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVD 481

Query: 476 FPLQ-LVLG 483
           FPLQ L LG
Sbjct: 482 FPLQRLSLG 490


>gi|115497674|ref|NP_001069594.1| ubiquitin carboxyl-terminal hydrolase 8 [Bos taurus]
 gi|113911783|gb|AAI22572.1| Ubiquitin specific peptidase 8 [Bos taurus]
 gi|296483106|tpg|DAA25221.1| TPA: ubiquitin specific peptidase 8 [Bos taurus]
          Length = 1085

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 745  GLRNLGNTCYMNSILQCLCNTPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 798

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 799  IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 848

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 849  EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 897

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 898  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 957

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 958  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1000


>gi|395535365|ref|XP_003769697.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Sarcophilus
           harrisii]
          Length = 535

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 135/300 (45%), Gaps = 40/300 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAG--YPTLT-AFVGFVSDFD 257
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G  +  LT AF   +    
Sbjct: 211 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAHQELTEAFADVLGALW 269

Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
            P             D     +P+ F  V + + P    S SG   Q+DAQEFL  +M++
Sbjct: 270 HP-------------DSCEAVNPTRFRTVFQKYVP----SFSGY-SQQDAQEFLKLLMER 311

Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPK---NKSAVTRTQSFL---PSALS 371
           +H E+ + +G       A+T   SL          P+   ++ A    + +L    S + 
Sbjct: 312 LHLEINR-RGRRAPPILADTPAPSLPRRGGALLEEPELSDDERANLMWKRYLDREDSKIV 370

Query: 372 DIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG 426
           D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E LE 
Sbjct: 371 DLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEELES 430

Query: 427 YRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LVLG 483
                       T + K + +Q   +IL+LHL RFS  S+GS K     V FPLQ L LG
Sbjct: 431 ENAPVCDRCRQRTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRLSLG 489


>gi|255548628|ref|XP_002515370.1| cysteine-type endopeptidase, putative [Ricinus communis]
 gi|223545314|gb|EEF46819.1| cysteine-type endopeptidase, putative [Ricinus communis]
          Length = 632

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 121/289 (41%), Gaps = 62/289 (21%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDFDTP 259
           P GL+N GN CF N  LQ L    P V  LL+E   R+  +  +        F+ +F   
Sbjct: 174 PCGLLNCGNSCFANVVLQCLTFTRPLVAYLLEEGHQRECRRNDWC-------FLCEFQVH 226

Query: 260 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
              +SK  +        PFSP    + L N   ++     G  +QEDA EF+ F +D M 
Sbjct: 227 VERASKSSH--------PFSPMSILSRLPNIGGNL-----GYGKQEDAHEFMRFAIDTMQ 273

Query: 320 DELLKLQGESTSINGA--NTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
              L   G   +++ A   T L+                                IFGG 
Sbjct: 274 SVCLDEYGGEKAVDPAFQETTLI------------------------------QHIFGGH 303

Query: 378 LKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTG 433
           L+S V+  + NK S  ++  + L ++I+ ++  ++ED L  F+  E L G   YR    G
Sbjct: 304 LQSQVICTKCNKISNQLENMMDLTVEIHGDS-GSLEDCLEQFTDREQLHGENMYRCD--G 360

Query: 434 NAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 482
               V A K + I+    IL + L RF  G  G  KL+K V FP  L L
Sbjct: 361 CNDYVKAWKRLTIRRAPNILTIALKRFQSGRFG--KLNKRVAFPESLDL 407


>gi|196016423|ref|XP_002118064.1| hypothetical protein TRIADDRAFT_33494 [Trichoplax adhaerens]
 gi|190579367|gb|EDV19464.1| hypothetical protein TRIADDRAFT_33494 [Trichoplax adhaerens]
          Length = 342

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 130/287 (45%), Gaps = 42/287 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL N GN CF+N+ LQ L +       + +               ++  F+S   +  G 
Sbjct: 4   GLKNLGNTCFMNSILQCLSNTKALTSFVLD--------------NSYSRFISGKSSMHGK 49

Query: 263 -----SSKKKNISVLDIGR-PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
                +S  +++   D      SP+ F++ ++ F P           Q+DAQEFL F++ 
Sbjct: 50  LMEAYASLMRSMWKSDTKETALSPATFKSQIQRFAPRFVGY-----SQQDAQEFLRFLLA 104

Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTR--TQSFLPSALSDIF 374
            +H++LL    E   I       +S  E DE   + P++K+       +S   S ++++F
Sbjct: 105 GLHEDLLHNSREKPKI-------ISTEEYDE---LQPEDKAVYCWKLYKSTDDSKVAELF 154

Query: 375 GGQLKSVVKAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG--YRTSS 431
            GQLKS ++    K  S T  PF  L L I   +  T+ D L+LF+  E L G    T S
Sbjct: 155 VGQLKSTLECTVCKNQSVTFDPFWDLSLPIPKISTITLLDCLKLFTREETLSGDNMPTCS 214

Query: 432 TGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
                 V  KK + +Q   +IL++H  RFS G    TKL+  + FP+
Sbjct: 215 KCKTKTVCTKK-LSVQKFPQILVIHFKRFS-GIHYRTKLNTLIDFPI 259


>gi|345794939|ref|XP_003433957.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Canis lupus
           familiaris]
          Length = 1010

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 670 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 723

Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
              K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 724 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 773

Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 774 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 822

Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
           KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 823 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRT 882

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 883 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 925


>gi|6573165|gb|AAF17575.1| testis ubiquitin specific processing protease [Rattus norvegicus]
 gi|149041436|gb|EDL95277.1| ubiquitin specific peptidase 2, isoform CRA_c [Rattus norvegicus]
          Length = 396

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 127/287 (44%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+   G+ T +A    + +F     
Sbjct: 59  GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 109

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 110 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 160

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++         +  +L  L +E+       K +    +      S + D+F GQL
Sbjct: 161 HNEVNRVAARP---KPSPESLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 210

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 211 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 268

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                    K   +Q   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 269 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 315


>gi|410961241|ref|XP_003987192.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Felis
            catus]
          Length = 1087

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 747  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 800

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 801  IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 850

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 851  EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 899

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 900  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRT 959

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 960  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1002


>gi|356554161|ref|XP_003545417.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
           max]
          Length = 729

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 132/318 (41%), Gaps = 76/318 (23%)

Query: 188 AINEPVKSVKDLL------------------PRGLINSGNLCFLNATLQALMSCSPFV-Q 228
           AI+ P+K  KD+L                  P GL+N GN CF N  LQ L    P V  
Sbjct: 151 AISRPIKQAKDVLFSYDEFVKFFNWDKPGFPPCGLLNCGNSCFANVVLQCLSFTKPLVAY 210

Query: 229 LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLK 288
           LL++   R+     +  L  F   V           ++  +S     + FSP    + L 
Sbjct: 211 LLEKGHRRECSCNDWCFLCEFENHV-----------ERTRLS----SQAFSPMNILSRL- 254

Query: 289 NFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEW 348
              P++  ++ G  RQEDA EF+ F +D M    L   G   ++                
Sbjct: 255 ---PNIGGTL-GYGRQEDAHEFMRFSIDTMQSVCLDEFGGEKAV---------------- 294

Query: 349 ETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS-VVKAQGNKASATVQPFLLLHLDIYSEA 407
               P N    T  Q         IFGG+L+S V+  + NK S   +  + L ++I+ +A
Sbjct: 295 ----PPNLQETTLIQH--------IFGGRLQSEVICTKCNKISNQYENMMDLTVEIHGDA 342

Query: 408 VHTIEDALRLFSAPENLEG---YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS 464
             ++E+ L  F+A E L+G   Y+    G    V A K + ++    IL + L RF  G 
Sbjct: 343 A-SLEECLDQFTARERLDGENMYKCE--GCKDYVKAWKRLTVKCAPNILTIALKRFQSGR 399

Query: 465 QGSTKLHKSVRFPLQLVL 482
            G  KL+K + FP  L L
Sbjct: 400 FG--KLNKRISFPETLNL 415


>gi|73954632|ref|XP_859639.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 2 [Canis
           lupus familiaris]
          Length = 606

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 123/287 (42%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+  +           + +F     
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSS----NVHTALMEEF----- 319

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++    T    +N   +    +DE      K +    +      S + D+F GQL
Sbjct: 371 HNEVNRV----TVRPKSNPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 420

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLTDCMRLFTKEDVLDGDEKPTCC 478

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                    K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 479 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 525


>gi|449486818|ref|XP_004157412.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Cucumis
           sativus]
          Length = 711

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 120/288 (41%), Gaps = 52/288 (18%)

Query: 197 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF 256
           KD  P GL+N GN CF N  LQ L    P    L E   R+        +     F  +F
Sbjct: 183 KDFHPCGLLNCGNSCFANVVLQCLSFTRPLFAFLLEKGHRN------ECVRDDWCFFCEF 236

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
            T    +S+          +PFSP+     L N   ++     G  RQEDA EF+ F +D
Sbjct: 237 QTHVERASQN--------AQPFSPNNIILRLPNIGGNL-----GYGRQEDAHEFMRFAID 283

Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
           +M                       LA  DE+   G K   A +R  + +      IFGG
Sbjct: 284 RMQ----------------------LACLDEFG--GEKAVCAHSRETTIIQH----IFGG 315

Query: 377 QLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRTSSTGN 434
           QL+S V+    N  S   +  + L ++I+ +A  ++E+ L  F+  E L G  +    G 
Sbjct: 316 QLQSQVICTNCNNVSNQHENMMDLTVEIHGDAA-SLEECLDQFTKIEWLHGDNKYKCDGC 374

Query: 435 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 482
              V A K + I+    IL + L RF  G  G  KL+K V FP  L L
Sbjct: 375 NDYVKASKRLTIKQAPNILTIALKRFQSGRFG--KLNKKVAFPETLDL 420


>gi|47219352|emb|CAG10981.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 369

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 126/287 (43%), Gaps = 44/287 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  A        D     
Sbjct: 36  GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 87

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD-- 320
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D  
Sbjct: 88  ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTVADIL 136

Query: 321 -ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
            E  K + ++  +    TA+ + AE D        NK+  T         + DIF G L 
Sbjct: 137 QEEKKQEKQNGRLKNNGTAVATEAETD--------NKAEST--------WVHDIFQGTLT 180

Query: 380 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGV 437
           +  +       S+  + FL L +D+  E   +I   LR FS  E L   Y+         
Sbjct: 181 NETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEYKYYCETCCSK 238

Query: 438 VTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
             A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 239 QEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 285


>gi|335776008|gb|AEH58762.1| ubiquitin carboxyl-terminal hydrolase 3-like protein [Equus
           caballus]
          Length = 413

 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 143/322 (44%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 100 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 153

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 154 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 204

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+   T+ P NK  +   
Sbjct: 205 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSPSNKCCINGA 254

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 255 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 310

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 311 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 370

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 371 KVDTYVEFPLRGLDMKCYLLEP 392


>gi|354489521|ref|XP_003506910.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like
           [Cricetulus griseus]
          Length = 565

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 128/301 (42%), Gaps = 43/301 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313

Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
           H E+ +    +  I  +           +L EE E       N   K  + R      S 
Sbjct: 314 HLEINRRGRRAPPILASGPVPSPPRRGGALHEEPELSDDDRANLMWKRYLERED----SK 369

Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
           + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 429

Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVL 482
           E             T + K + +Q   +IL+LHL RFS       K    V FPLQ L L
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDFPLQRLSL 489

Query: 483 G 483
           G
Sbjct: 490 G 490


>gi|344293364|ref|XP_003418393.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Loxodonta
           africana]
          Length = 520

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 140/322 (43%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAF-- 249
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQ 211

Query: 250 ----VGFVSDFDTPSGGSSKKKNISVLDIGRP--FSP-SMFEAVLKNFTPDVPNSISGRP 302
               V  V +F         +K +  L  G P  FSP S+F  V K     +PN   G  
Sbjct: 212 GDNNVSLVEEF---------RKTLCALWQGSPTAFSPESLFYVVWK----IMPN-FRGY- 256

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+   T+   NK  +   
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSASNKCCINGA 306

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 307 S----TVVTAIFGGVLQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 362

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEP 444


>gi|70794797|ref|NP_001020595.1| ubiquitin carboxyl-terminal hydrolase 3 [Rattus norvegicus]
 gi|68480670|gb|AAY97907.1| ubiquitin specific protease 3 [Rattus norvegicus]
          Length = 520

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 142/322 (44%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 152 STAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G S   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 206 ----YHTRSQGDS---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           RQ+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+   T+   NK  +   
Sbjct: 257 RQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSANNKCCINGA 306

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 307 ----STVVTTIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K L LHL RF + +    
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKALCLHLKRFHWTAYLRN 422

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V+FPL+ +  +  L+ P
Sbjct: 423 KVDTYVQFPLRGLDMKCYLLEP 444


>gi|189083712|ref|NP_001121110.1| ubiquitin carboxyl-terminal hydrolase 21 [Rattus norvegicus]
 gi|226751948|sp|B2GUX4.1|UBP21_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
           Full=Deubiquitinating enzyme 21; AltName: Full=Ubiquitin
           thioesterase 21; AltName:
           Full=Ubiquitin-specific-processing protease 21
 gi|183986536|gb|AAI66443.1| Usp21 protein [Rattus norvegicus]
          Length = 565

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 128/301 (42%), Gaps = 43/301 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313

Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
           H E+ +    +  I  +           +L EE E       N   K  + R      S 
Sbjct: 314 HLEINRRGRRAPPILASGPVPSPPRRGGALHEEPELSDDDRANLMWKRYLERED----SK 369

Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
           + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 429

Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVL 482
           E             T + K + +Q   +IL+LHL RFS       K    V FPLQ L L
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDFPLQRLSL 489

Query: 483 G 483
           G
Sbjct: 490 G 490


>gi|45382531|ref|NP_990257.1| ubiquitin carboxyl-terminal hydrolase 2 [Gallus gallus]
 gi|3800760|gb|AAC68863.1| ubiquitin specific protease 46 [Gallus gallus]
          Length = 403

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 120/287 (41%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDI---PKAGYPTLTAFVGFVSDFDT 258
           GL N GN C++N+ LQ L +        LQ    RD     +     ++ F   +  F T
Sbjct: 20  GLRNLGNTCYMNSILQCLSNTKELRDYCLQNQYLRDFNNNSRMRTAFMSEFAKLIQLFWT 79

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
            S   S              SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 80  SSPNDS-------------VSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 121

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H E+ ++         AN   +    +DE      K++    R Q    S +SD F GQL
Sbjct: 122 HGEVNRVLVRPR----ANADTLDHFPDDE------KSRQMWRRYQEREDSPVSDFFLGQL 171

Query: 379 KS-VVKAQGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 433
           KS +  ++    S    PF  L L I    Y E   T+   L LF+  + L+G    +  
Sbjct: 172 KSSLTSSECGYCSTAFDPFWDLSLPIPKKGYGEV--TLMHCLPLFTKEDLLDGDEKPTCC 229

Query: 434 NAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                T   K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 230 RCKARTRCTKKFSIQKFPKILLLHLKRFSEARIRASKLTTFVDFPLK 276


>gi|449447371|ref|XP_004141442.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Cucumis
           sativus]
          Length = 711

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 120/288 (41%), Gaps = 52/288 (18%)

Query: 197 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF 256
           KD  P GL+N GN CF N  LQ L    P    L E   R+        +     F  +F
Sbjct: 183 KDFHPCGLLNCGNSCFANVVLQCLSFTRPLFAFLLEKGHRN------ECVRDDWCFFCEF 236

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
            T    +S+          +PFSP+     L N   ++     G  RQEDA EF+ F +D
Sbjct: 237 QTHVERASQN--------AQPFSPNNIILRLPNIGGNL-----GYGRQEDAHEFMRFAID 283

Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
           +M                       LA  DE+   G K   A +R  + +      IFGG
Sbjct: 284 RMQ----------------------LACLDEFG--GEKAVCAHSRETTIIQH----IFGG 315

Query: 377 QLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRTSSTGN 434
           QL+S V+    N  S   +  + L ++I+ +A  ++E+ L  F+  E L G  +    G 
Sbjct: 316 QLQSQVICTNCNNVSNQHENMMDLTVEIHGDAA-SLEECLDQFTKIEWLHGDNKYKCDGC 374

Query: 435 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 482
              V A K + I+    IL + L RF  G  G  KL+K V FP  L L
Sbjct: 375 NDYVKASKRLTIKQAPNILTIALKRFQSGRFG--KLNKKVAFPETLDL 420


>gi|428180637|gb|EKX49504.1| hypothetical protein GUITHDRAFT_47981, partial [Guillardia theta
           CCMP2712]
          Length = 316

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 130/300 (43%), Gaps = 55/300 (18%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL N GN CFLNA +Q L +  PF         RD   + +         +   DT   G
Sbjct: 4   GLQNLGNTCFLNACIQCLAAVPPF---------RDFFLSNH--------HIFRLDT---G 43

Query: 263 SSKKKNISV--------LDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
           SS +  +++        +  G P+S S+  A+LK+         +G  RQ D+QEFL F+
Sbjct: 44  SSMRGTLALSFGELLHKIWQGEPYS-SVSAAILKDRVSKFAPQFTG-CRQHDSQEFLRFL 101

Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI- 373
           +D +H++L       TS N      + +    +   V  K   ++   + +    LS + 
Sbjct: 102 LDGLHEDL------KTSDNDEMRQFMEVRMAHD--QVASKYNESMPAMEMYCLDNLSCVT 153

Query: 374 --FGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYS--------EAVHT----IEDALRLF 418
             FGGQL S ++ +  +  S    PFL + L I S        E  H     + D   LF
Sbjct: 154 AAFGGQLVSQIECRTCSHQSRCYDPFLDISLPIPSPSQFKEGQEQAHRPRCHLTDCFNLF 213

Query: 419 SAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 477
           +  E LEG    S  N    + A K +K  +L  IL+LH+ RFSY      KL  S+ FP
Sbjct: 214 TEKEVLEGENMYSCPNCNSRSCATKQLKFVSLPPILVLHIKRFSYTEVSREKLVTSLEFP 273


>gi|10720332|sp|Q9QZL6.1|UBP21_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
           Full=Deubiquitinating enzyme 21; AltName: Full=Ubiquitin
           thioesterase 21; AltName:
           Full=Ubiquitin-specific-processing protease 21
 gi|5853115|gb|AAD54322.1|AF177759_1 ubiquitin specific protease 16 [Mus musculus]
 gi|18257320|gb|AAH21903.1| Ubiquitin specific peptidase 21 [Mus musculus]
          Length = 566

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 93/302 (30%), Positives = 128/302 (42%), Gaps = 44/302 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313

Query: 319 HDELLKLQGESTSINGANTALV-------SLAEEDEWETVGPKN---KSAVTRTQSFLPS 368
           H E+ +    +  I  +            +L EE E       N   K  + R      S
Sbjct: 314 HLEINRRGRRAPPILASGPVPSPPRRGGGALHEEPELSDDDRANLMWKRYLERED----S 369

Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
            + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E 
Sbjct: 370 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEE 429

Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LV 481
           LE             T + K + +Q   +IL+LHL RFS       K    V FPLQ L 
Sbjct: 430 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDFPLQRLS 489

Query: 482 LG 483
           LG
Sbjct: 490 LG 491


>gi|410972085|ref|XP_003992491.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Felis catus]
          Length = 606

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 123/287 (42%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+        +     + +F     
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHGS----SVHTALMEEF----- 319

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++    T    +N   +    +DE      K +    +      S + D+F GQL
Sbjct: 371 HNEVNRV----TVRPKSNPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 420

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 478

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                    K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 479 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 525


>gi|301756532|ref|XP_002914115.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Ailuropoda
           melanoleuca]
 gi|281347816|gb|EFB23400.1| hypothetical protein PANDA_001954 [Ailuropoda melanoleuca]
          Length = 606

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 123/287 (42%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+  +           + +F     
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSS----NVHTALMEEF----- 319

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++    T    +N   +    +DE      K +    +      S + D+F GQL
Sbjct: 371 HNEVNRV----TVRPKSNPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 420

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 478

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                    K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 479 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 525


>gi|302772254|ref|XP_002969545.1| hypothetical protein SELMODRAFT_91996 [Selaginella moellendorffii]
 gi|300163021|gb|EFJ29633.1| hypothetical protein SELMODRAFT_91996 [Selaginella moellendorffii]
          Length = 374

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 118/286 (41%), Gaps = 58/286 (20%)

Query: 200 LPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 258
           +P GLIN GN C+ N  LQ L S  P    LL  +      + G+  +      V     
Sbjct: 81  VPCGLINCGNSCYANVVLQCLASTRPLAAYLLHGMHQEACEREGWCFMCELEDHVQ---- 136

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                         +   PFSP    + L++    + NS+ G  RQEDA EF+   +D M
Sbjct: 137 -----------KAFNNQMPFSPIKILSRLRS----IGNSL-GYGRQEDAHEFMRLAVDCM 180

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
               L   G  T+++                           RTQ    + +  IFGG L
Sbjct: 181 QKICLDEAGGETTLDA--------------------------RTQE--TTLIQHIFGGYL 212

Query: 379 KS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGN 434
           +S VV  Q  + S   +  L L + I    V ++EDAL+ F++PE L+G   YR      
Sbjct: 213 QSQVVCCQCQQRSNLYENMLDLSVGIQGN-VESLEDALKQFTSPEWLDGDNKYRCDRCN- 270

Query: 435 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
              V AKK + +     IL + L RF  G  G  K++K V FP +L
Sbjct: 271 -AYVRAKKRLSVHEAPNILTIALKRFQGGKFG--KINKKVTFPEEL 313


>gi|57108191|ref|XP_535474.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Canis
            lupus familiaris]
          Length = 1116

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 776  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 829

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 830  IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 879

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 880  EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 928

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 929  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRT 988

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 989  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1031


>gi|224809307|ref|NP_038947.2| ubiquitin carboxyl-terminal hydrolase 21 [Mus musculus]
          Length = 566

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 93/302 (30%), Positives = 128/302 (42%), Gaps = 44/302 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313

Query: 319 HDELLKLQGESTSINGANTALV-------SLAEEDEWETVGPKN---KSAVTRTQSFLPS 368
           H E+ +    +  I  +            +L EE E       N   K  + R      S
Sbjct: 314 HLEINRRGRRAPPILASGPVPSPPCRGGGALHEEPELSDDDRANLMWKRYLERED----S 369

Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
            + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E 
Sbjct: 370 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEE 429

Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LV 481
           LE             T + K + +Q   +IL+LHL RFS       K    V FPLQ L 
Sbjct: 430 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDFPLQRLS 489

Query: 482 LG 483
           LG
Sbjct: 490 LG 491


>gi|356556906|ref|XP_003546761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Glycine
           max]
          Length = 989

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 120/287 (41%), Gaps = 58/287 (20%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDFD 257
           + PRGL+N GN C+ NA LQ L S  P V  LL    ++      +  +           
Sbjct: 466 IYPRGLLNCGNSCYANAVLQCLTSTKPLVIYLLYRSHSKACCAKDWCLMCEL-------- 517

Query: 258 TPSGGSSKKKNISVL-DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
                   +++I +L + G P SPS     +++      N   G   QEDA EFL  ++ 
Sbjct: 518 --------EQHIMILRENGAPLSPSRILWHMRSI-----NCHMGEGSQEDAHEFLRLLIA 564

Query: 317 QMHDELLK-LQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
            M    L+ L GE                    + V P+ +           + +   FG
Sbjct: 565 SMQSICLEGLGGE--------------------KKVDPRIQET---------TFIQHTFG 595

Query: 376 GQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 434
           G+L+S VK    N  S   +  + L L+I    V ++EDAL  F++PE+L+G      G 
Sbjct: 596 GRLQSKVKCLNCNHESERYENIMDLTLEILG-WVESLEDALTQFTSPEDLDGENMYRCGR 654

Query: 435 A-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
               V A+K + I     IL + L RF  G  G  K++K + FP  L
Sbjct: 655 CTSYVRARKQLSIHEAPNILTIVLKRFQEGRYG--KINKCITFPEML 699


>gi|345799830|ref|XP_003434615.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Canis lupus
           familiaris]
          Length = 395

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 136/324 (41%), Gaps = 43/324 (13%)

Query: 167 RDQNAAACNS-SISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSP 225
           RD   + C + S+     +P     +  KS + L   GL N GN CF+N+ LQ L +   
Sbjct: 23  RDLGPSCCLAPSLCLQPHLPCVLCLQNSKSAQGLA--GLRNLGNTCFMNSILQCLSNTRE 80

Query: 226 FVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRP---FSPS 281
                LQ L  RD+  +           + +F          K I  +    P    SPS
Sbjct: 81  LRDYCLQRLYMRDLSHSS----NVHTALMEEF---------AKLIQTIWTSSPNDVVSPS 127

Query: 282 MFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVS 341
            F+  ++ + P           Q+DAQEFL F++D +H+E+ ++     S    N   + 
Sbjct: 128 EFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGLHNEVNRVTVRPKS----NPENLD 178

Query: 342 LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATV-QPFLLLH 400
              +DE      K +    +      S + D+F GQLKS +        +TV  PF  L 
Sbjct: 179 HLPDDE------KGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLS 232

Query: 401 LDI----YSEAVHTIEDALRLFSAPENLEG-YRTSSTGNAGVVTAKKSVKIQTLSKILIL 455
           L I    Y E   T+ D +RLF+  + L+G  + +           K   IQ   KIL+L
Sbjct: 233 LPIAKRGYPEV--TLTDCMRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVL 290

Query: 456 HLMRFSYGSQGSTKLHKSVRFPLQ 479
           HL RFS     ++KL   V FPL+
Sbjct: 291 HLKRFSESRIRTSKLTTFVNFPLR 314


>gi|301770085|ref|XP_002920464.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Ailuropoda
            melanoleuca]
 gi|281341524|gb|EFB17108.1| hypothetical protein PANDA_009195 [Ailuropoda melanoleuca]
          Length = 1116

 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 122/283 (43%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 776  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 829

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 830  IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 879

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 880  EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 928

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 929  KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRT 988

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 989  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1031


>gi|344287000|ref|XP_003415244.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Loxodonta
           africana]
          Length = 565

 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 132/302 (43%), Gaps = 45/302 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313

Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
           H E+ +    +  I   N A        +L EE E       N   K  + R      S 
Sbjct: 314 HLEINRRGRRAPPILANNPAPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----SK 369

Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
           + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKRGFAGGKVSLRDCFSLFTKEEEL 429

Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 481
           E             T + K + +Q   +IL+L L RFS  S+GS K     V FPLQ L 
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLDLNRFS-ASRGSIKKSSVGVDFPLQRLS 488

Query: 482 LG 483
           LG
Sbjct: 489 LG 490


>gi|348572270|ref|XP_003471916.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Cavia
           porcellus]
          Length = 1077

 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 121/283 (42%), Gaps = 33/283 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 737 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 790

Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
              K      L  G  R  SP  F+  +        +  +G   Q+D+QE L F+MD +H
Sbjct: 791 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 840

Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 841 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIV-----------ALFQGQF 889

Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
           KS V+    ++ S T + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 890 KSTVQCLTCHRKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 949

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 950 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 992


>gi|291397578|ref|XP_002715234.1| PREDICTED: ubiquitin-specific protease 21 [Oryctolagus cuniculus]
          Length = 565

 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 128/301 (42%), Gaps = 43/301 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313

Query: 319 HDEL---------LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 369
           H E+         +   G + S      AL+   E  + +      K  + R      S 
Sbjct: 314 HLEINRRGRRAPPILANGPAPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----SK 369

Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
           + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 429

Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVL 482
           E             T + K + +Q   +IL+LHL RFS       K    V FPLQ L L
Sbjct: 430 ELENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDFPLQRLSL 489

Query: 483 G 483
           G
Sbjct: 490 G 490


>gi|449266379|gb|EMC77432.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Columba livia]
          Length = 490

 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 141/322 (43%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   L   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 122 STTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRT------ 175

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 176 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 226

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +++ L E     T+   NK  +   
Sbjct: 227 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSVI-LQEN---ATLSASNKCCINGA 276

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             + 
Sbjct: 277 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRTKNQENGPMC 332

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           T+ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 333 TLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 392

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 393 KVDTYVEFPLRGLDMKCYLLEP 414


>gi|429240193|ref|NP_595732.2| ubiquitin C-terminal hydrolase Ubp4 [Schizosaccharomyces pombe
           972h-]
 gi|384872646|sp|O60139.2|UBP4_SCHPO RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase 4;
           AltName: Full=Deubiquitinating enzyme 4; AltName:
           Full=Ubiquitin thioesterase 4; AltName:
           Full=Ubiquitin-specific-processing protease 4
 gi|347834304|emb|CAA18405.2| ubiquitin C-terminal hydrolase Ubp4 [Schizosaccharomyces pombe]
          Length = 593

 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 136/325 (41%), Gaps = 66/325 (20%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCS----PFVQ---LLQELRTRDIPKAGYPTLT 247
           S ++  P GL N GN C++N  LQ L +C     P +Q   LLQ + T++    G    +
Sbjct: 220 SYENYQPIGLTNLGNTCYMNCVLQCLFACKDLTIPMLQGRGLLQNINTKNPLGTGGKITS 279

Query: 248 AFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDA 307
           AF   +       G              R  SP  F  ++++   D   SI G   Q DA
Sbjct: 280 AFFSLLQSVLLNHG-------------QRSISPRNFLEIVQSLNRDF--SIDG---QCDA 321

Query: 308 QEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEED---------------EWETVG 352
           QEFL+F +D++H++L        + N + + +  L E+                EW    
Sbjct: 322 QEFLNFFLDKLHEDL--------NSNASRSPIAPLTEDQLSAREELPLSHFSHIEWNLHL 373

Query: 353 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPF--LLLHLDIYSEAVH 409
             NKS V              F GQL S  +     + S T  PF  L + +D  S  V 
Sbjct: 374 RSNKSIVVNN-----------FVGQLCSRTQCMTCGRTSTTFAPFTSLAIPIDDVSHVV- 421

Query: 410 TIEDALRLFSAPENLEGYRTSSTGNAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++++ L  FSAPE L+G+         V  +AKK + I  L + LI+ + RF     G  
Sbjct: 422 SLQECLLKFSAPELLQGHDGWHCPVCKVQRSAKKVIMISKLPEYLIIQIQRFKISVMGRK 481

Query: 469 KLHKSVRFPLQLVLGRDLLVTPSAE 493
           K+   +   LQ  +   +LV PS +
Sbjct: 482 KIDTPLGLSLQ--IPSKMLVPPSFQ 504


>gi|126310809|ref|XP_001371948.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Monodelphis
           domestica]
          Length = 564

 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 130/315 (41%), Gaps = 70/315 (22%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL N GN CFLNA LQ L S  P       LR RD                   + PSGG
Sbjct: 211 GLRNLGNTCFLNAVLQCLSSTRPLRDFC--LR-RDF----------------RLEVPSGG 251

Query: 263 SSKKKNISVL----------DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
            ++++               D     +P+ F  V + + P    S SG   Q+DAQEFL 
Sbjct: 252 RTQQELTEAFADVLGALWHPDSCEAVNPTRFRTVFQKYVP----SFSGY-SQQDAQEFLK 306

Query: 313 FIMDQMHDELLKLQGESTSI------------NGANTALVSLAEEDE----WETVGPKNK 356
            +M+++H E+ +    +  I             GA      L+++D+    W+    +  
Sbjct: 307 LLMERLHLEINRRGRRAPPILTDTPAPSLPRRGGALLEEPELSDDDQANLMWKRYLDRED 366

Query: 357 SAVTRTQSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTI 411
           S +            D+F GQLKS +K Q     S T + F  L L I    ++    ++
Sbjct: 367 SKIV-----------DLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSL 415

Query: 412 EDALRLFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKL 470
            D   LF+  E LE             T + K + +Q   +IL+LHL RFS  S+GS K 
Sbjct: 416 RDCFSLFTKEEELESENAPVCDRCRQRTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKK 474

Query: 471 HK-SVRFPLQ-LVLG 483
               V FPLQ L LG
Sbjct: 475 SSVGVDFPLQRLSLG 489


>gi|89269005|emb|CAJ81533.1| ubiquitin specific protease 3 [Xenopus (Silurana) tropicalis]
          Length = 522

 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 138/322 (42%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAF-- 249
           S   L   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 154 STTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQ 213

Query: 250 ----VGFVSDFDTPSGGSSKKKNISVLDIGR--PFSP-SMFEAVLKNFTPDVPNSISGRP 302
               V  V +F         +K +  L  G    FSP S+F  V K     +PN   G  
Sbjct: 214 GDVNVSLVEEF---------RKTLCALWQGNQTAFSPESLFYVVWK----IMPN-FRGY- 258

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQGE    +G++ +++S A           NK  +   
Sbjct: 259 QQQDAHEFMRYLLDHLH---LELQGE---FDGSSHSVLSQANCSR----SACNKCCINGA 308

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
            + + S    +FGG L++ V        S    PFL L LDI S+               
Sbjct: 309 STVVTS----VFGGVLQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRCKNQENGPTC 364

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           T+ D LR F+  E L E    +         + K   IQ L K+L LHL RF + +    
Sbjct: 365 TLRDCLRSFTDLEELDETELYTCLKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 424

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 425 KVDTYVDFPLRGLDMKSFLLEP 446


>gi|213407610|ref|XP_002174576.1| ubiquitin carboxyl-terminal hydrolase [Schizosaccharomyces
           japonicus yFS275]
 gi|212002623|gb|EEB08283.1| ubiquitin carboxyl-terminal hydrolase [Schizosaccharomyces
           japonicus yFS275]
          Length = 473

 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 134/326 (41%), Gaps = 54/326 (16%)

Query: 189 INEPVKSVKDLL---PRGLINSGNLCFLNATLQALMSCSPFV------QLLQELRTRDIP 239
           +N P K  K+ +   P GL N GN C++N+ LQ   +CSPFV      Q L+ L   +  
Sbjct: 108 LNSPAKVGKNTISISPVGLTNLGNSCYMNSILQCCFACSPFVSLFIDGQALRSLNQNNPL 167

Query: 240 KAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS 299
             G    TAF             +S    +  L      SP       K+F  +V +  S
Sbjct: 168 GTGGKLTTAF-------------TSLSHQVRALQGQGVCSP-------KDFLANVCSIYS 207

Query: 300 --GRPRQEDAQEFLSFIMDQMHDELLKLQGE------STSINGANTAL-VSLAEEDEWET 350
                 Q DAQEFL+F +D +H++L    G+      +T    A   L +S     EW  
Sbjct: 208 EFDTASQHDAQEFLNFFLDSLHEDLNSSAGKAPLPELTTEQQAAKERLPMSHLANIEWNI 267

Query: 351 VGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVH 409
              +N S +           +D+F GQL S +K     + S T  PF  L L I      
Sbjct: 268 YKRRNSSPI-----------ADLFFGQLASQIKCLTCQRTSTTFAPFSSLALPIKDTTTS 316

Query: 410 -TIEDALRLFSAPENLEGYRTSSTGNAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGS 467
            T+E  +  FS  E L+G          V   AKK++ +  L  +LI  L RF       
Sbjct: 317 CTLETCISAFSMQEVLQGNNAWHCPKCDVPRDAKKTMSVSRLPSVLIFQLKRFRMIGTTH 376

Query: 468 TKLHKSVRFPLQLVLGRDLLVTPSAE 493
            K+  S+ F  ++  G  ++V PS +
Sbjct: 377 RKIETSLEFKKRISSG--MIVPPSFQ 400


>gi|335295001|ref|XP_003357373.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 2
           [Sus scrofa]
          Length = 396

 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 125/287 (43%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+  +     +A    + +F     
Sbjct: 59  GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSS----SAHTALMEEF----- 109

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 110 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 160

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++     S   +   L  L +++       K +    +      S + D+F GQL
Sbjct: 161 HNEVNRVTVRPKS---SPEGLDHLPDDE-------KGRQMWRKYLEREDSRIGDLFVGQL 210

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 211 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 268

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                    K   +Q   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 269 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 315


>gi|67972114|dbj|BAE02399.1| unnamed protein product [Macaca fascicularis]
          Length = 331

 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/179 (32%), Positives = 86/179 (48%), Gaps = 14/179 (7%)

Query: 304 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRT 362
           Q+D+QE L F+MD +H++L K           N  L    A E  W+     N+S +   
Sbjct: 79  QQDSQELLLFLMDGLHEDLNKADNRKRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVA- 137

Query: 363 QSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
                     +F GQ KS V+    +K S T + F+ L L + S +  T++D LRLFS  
Sbjct: 138 ----------LFQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKE 187

Query: 422 ENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
           E L +  R   +       + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 188 EKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDDRWKQKLQTSVDFPLE 246


>gi|410908263|ref|XP_003967610.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Takifugu
           rubripes]
          Length = 612

 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 175/425 (41%), Gaps = 77/425 (18%)

Query: 111 NGHIKNSTNGPALSNGVNHLKADGIDFSSFHQNAGGHANPSPISKFHVLCD--------- 161
           NGH K        + GV+  K+D  D   +H +     + S  S F   CD         
Sbjct: 54  NGHAKKHFE-ETQAVGVSQRKSDKQDKEKYHHSVC--MDCSSYSVFCYRCDDFVVNDTKL 110

Query: 162 GNIDG-RDQNAAACNSSISGSKEVPMK---AINEPVKSVKD-----LLPRGLINSGNLCF 212
           G +   R+   +  N ++ G ++   K   +++   K +KD     +   GL N GN CF
Sbjct: 111 GQVQKVREHLQSLENFALMGDRQRKRKFQESLSADSKLMKDNDGIAVGATGLRNLGNTCF 170

Query: 213 LNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSD---FDTPSGGSSKKKNI 269
           +NA LQ+L +   F    +EL          P ++   G  +    + T S G S   ++
Sbjct: 171 MNAILQSLSNIEQFSCYFKEL----------PAVSLRSGKTAGRRMYHTRSQGDS---SV 217

Query: 270 SVLDIGRPFSPSMFEAVLKNFTPD--------VPNSISGRPRQEDAQEFLSFIMDQMHDE 321
           S+++  R    S+++     F+PD        +  S  G  +Q+DA EF+ +++D +H E
Sbjct: 218 SLVEEFRKTLCSLWQGSQTAFSPDSLFYTIWKIMPSFRGY-QQQDAHEFMRYLLDHLHRE 276

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
           L           G N A  + + +D         K  +  T S + S    IFGG L++ 
Sbjct: 277 LQY---------GRNGASHAASPQDGVRLSAADGKCCINGTASVVTS----IFGGILQNE 323

Query: 382 VKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRLFSAPENLEGYR 428
           V        S    PFL L LDI S+               T+ D LR F+  E L+   
Sbjct: 324 VNCLICGTESRKFDPFLDLSLDIPSQFRQKRSKDQEPGPTCTLSDCLRSFTDLEELD--E 381

Query: 429 TSSTGNAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRD 485
           T           +KS K   +Q L K+L LHL RF + +    K+   V FPL+ +  R 
Sbjct: 382 TELYFCHKCKKRQKSTKKFWVQKLPKVLCLHLKRFHWTAFLRNKIDTYVEFPLKGLDMRG 441

Query: 486 LLVTP 490
            L+ P
Sbjct: 442 YLLEP 446


>gi|148238088|ref|NP_001090549.1| ubiquitin thiolesterase 3 [Xenopus laevis]
 gi|117558253|gb|AAI26024.1| LOC100036785 protein [Xenopus laevis]
          Length = 522

 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 138/322 (42%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAF-- 249
           S   L   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 154 STTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQ 213

Query: 250 ----VGFVSDFDTPSGGSSKKKNISVLDIGR--PFSP-SMFEAVLKNFTPDVPNSISGRP 302
               V  V +F         +K +  L  G    FSP S+F  V K     +PN   G  
Sbjct: 214 GDVNVSLVEEF---------RKTLCALWQGNQTAFSPESLFYVVWK----IMPN-FRGY- 258

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQGE    +G++ +++S A           NK  +   
Sbjct: 259 QQQDAHEFMRYLLDHLH---LELQGE---FDGSSHSVLSQANCSR----SVSNKCCINGA 308

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
            + + S    +FGG L++ V        S    PFL L LDI S+               
Sbjct: 309 STVVTS----VFGGVLQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRCKNQENGPTC 364

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           T+ D LR F+  E L E    +         + K   IQ L K+L LHL RF + +    
Sbjct: 365 TLRDCLRSFTDLEELDETELYTCLKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 424

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 425 KVDTYVDFPLRGLDMKSFLLEP 446


>gi|354504731|ref|XP_003514427.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 1
           [Cricetulus griseus]
 gi|354504733|ref|XP_003514428.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 2
           [Cricetulus griseus]
 gi|354504735|ref|XP_003514429.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 3
           [Cricetulus griseus]
          Length = 613

 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 124/295 (42%), Gaps = 56/295 (18%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+   G+ T  A    + +F     
Sbjct: 276 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSNAHTALMEEF----- 326

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 327 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 377

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP---SALSDIFG 375
           H+E+             N   V      E     P ++      + +L    S + D+F 
Sbjct: 378 HNEV-------------NRVTVRPKPSPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFV 424

Query: 376 GQLKSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG---- 426
           GQLKS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G    
Sbjct: 425 GQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKP 482

Query: 427 --YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
             YR  +          K   +Q   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 483 TCYRCRARKRC-----IKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 532


>gi|302774793|ref|XP_002970813.1| hypothetical protein SELMODRAFT_171601 [Selaginella moellendorffii]
 gi|300161524|gb|EFJ28139.1| hypothetical protein SELMODRAFT_171601 [Selaginella moellendorffii]
          Length = 419

 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 118/286 (41%), Gaps = 58/286 (20%)

Query: 200 LPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 258
           +P GLIN GN C+ N  LQ L S  P    LL  +      + G+  +      V     
Sbjct: 112 VPCGLINCGNSCYANVVLQCLASTRPLAAYLLHGMHQEACQREGWCFMCELEDHVQ---- 167

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                         +   PFSP    + L++    + NS+ G  RQEDA EF+   +D M
Sbjct: 168 -----------KAFNNQMPFSPIKILSRLRS----IGNSL-GYGRQEDAHEFMRLAVDCM 211

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
               L   G  T+++                           RTQ    + +  IFGG L
Sbjct: 212 QKICLDEAGGETTLDA--------------------------RTQE--TTLIQHIFGGYL 243

Query: 379 KS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGN 434
           +S VV  Q  + S   +  L L + I    V ++EDAL+ F++PE L+G   YR      
Sbjct: 244 QSQVVCCQCQQRSNLYENMLDLSVGIQGN-VESLEDALKQFTSPEWLDGDNKYRCDRCN- 301

Query: 435 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
              V AKK + +     IL + L RF  G  G  K++K V FP +L
Sbjct: 302 -AYVRAKKRLSVHEAPNILTIALKRFQGGKFG--KINKKVTFPEEL 344


>gi|340375672|ref|XP_003386358.1| PREDICTED: hypothetical protein LOC100638851 [Amphimedon
           queenslandica]
          Length = 1002

 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 121/288 (42%), Gaps = 40/288 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL NS N C+LNA LQ +   +           +  P      + A+  F+ D   P   
Sbjct: 663 GLKNSKNSCYLNAVLQCVSHTTKLTDYFLSGEAKKEPGYSSKIIGAYNSFLKDMWMP--- 719

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
             K+   +VL       P    A L   TP +   I     QEDAQEFL +++  +HD +
Sbjct: 720 --KENTKAVL-------PRRIRAAL---TPSI--DILQENGQEDAQEFLQYLLPCLHDHI 765

Query: 323 LK--LQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
            K  L    T     N  L+S+                V  +  F+ S  S++F GQ KS
Sbjct: 766 NKPPLDSPRTKALKRNNGLISITP-------------PVPISSEFMKSCFSELFMGQTKS 812

Query: 381 VVKA-QGNKASATVQPFLLLHLD-----IYSEAVH-TIEDALRLFSAPENLEGYRTSSTG 433
            +   + ++ S++V+ F  L L      ++S+ V  T+ D  RLF+A E L         
Sbjct: 813 SLTCHKCSRTSSSVESFWNLSLPLPTKGLFSKYVSFTLSDCFRLFAAEEKLIKENRPRCS 872

Query: 434 NAGVVTA-KKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
             G +    K +++Q   +  ILHL RFS+      KL  +V+ P  L
Sbjct: 873 KCGTLQNFSKKLEVQKFPESFILHLKRFSFQDGHLVKLTSAVKVPTTL 920


>gi|31873342|emb|CAD97662.1| hypothetical protein [Homo sapiens]
          Length = 1118

 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 121/283 (42%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 778  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 832  IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 881

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 882  EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S   + F+ L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 931  KSTVQCLTCHKKSRAFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 991  RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 1033


>gi|417403199|gb|JAA48417.1| Putative ubiquitin carboxyl-terminal hydrolase 2 [Desmodus
           rotundus]
          Length = 602

 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 119/287 (41%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+  +      A    + +F     
Sbjct: 265 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSS----NAHTALMEEF----- 315

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
            +   + I    +    SPS F+  ++ + P           Q+DAQEFL F++D +H  
Sbjct: 316 -AKLIQTIWTSSLNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGLH-- 367

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP---SALSDIFGGQL 378
                      N  N   V      E     P ++      + +L    S + D+F GQL
Sbjct: 368 -----------NAVNRVTVRPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQL 416

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 417 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 474

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                    K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 475 RCRTRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 521


>gi|443718172|gb|ELU08917.1| hypothetical protein CAPTEDRAFT_127326, partial [Capitella teleta]
          Length = 363

 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 126/287 (43%), Gaps = 39/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPS 260
           GL+N GN C+ N+ LQAL  C PF +  L  +   R+  K    T  A        D   
Sbjct: 25  GLVNFGNTCYCNSVLQALYFCRPFREQVLSYKQHMRNSKKETLLTCLA--------DLFH 76

Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
             +++KK +  +      +P  F   L+       N +     Q+DA EFL+++++ + D
Sbjct: 77  NIATQKKKVGTI------APKKFIQRLRK-----ENELFDNYMQQDAHEFLNYLLNTVAD 125

Query: 321 ELLKLQGESTSINGANTA-LVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
               LQGE+  + G   A  V+ A           +KS         P+ + +IF G L 
Sbjct: 126 ---LLQGENKQLKGGGKANAVNGATNHHQGNFHDNSKSD--------PTWVHNIFQGTLT 174

Query: 380 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGV 437
           +  +       S+  + FL L +D+  E   +I   LR FS+ E L   Y+         
Sbjct: 175 NETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSSTETLCSEYKYYCEVCCSK 232

Query: 438 VTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
             A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 233 QEAQKRMRVKKLPHILALHLKRFKYMEQLNRYTKLSYRVVFPLELRL 279


>gi|396474876|ref|XP_003839649.1| hypothetical protein LEMA_P110890.1 [Leptosphaeria maculans JN3]
 gi|312216219|emb|CBX96170.1| hypothetical protein LEMA_P110890.1 [Leptosphaeria maculans JN3]
          Length = 1072

 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 124/287 (43%), Gaps = 34/287 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL+N G  C++N+ +Q L        L L +   RD+ +  +      +        P  
Sbjct: 691 GLLNFGVTCYMNSVVQCLSGTLSLSDLFLTQRYQRDLQRDNWKGTKGIL--------PEA 742

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
            ++   N+   D+G    PS F  +  +F     NS  G   Q+DA+EFL F++D MH++
Sbjct: 743 YATLLSNLYKGDVGS-VRPSTFRRICGHF-----NSQWGVDEQQDAKEFLEFVLDYMHED 796

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVG-PKNKSAVT---RTQSFLPSALSDIFGGQ 377
           L        +I    + L  L+++ E +    P+  +A     R Q    S +  IF GQ
Sbjct: 797 L--------NITWNKSPLKPLSDQQELQREQFPRQYAAKIEWGRYQHRDMSVIGGIFAGQ 848

Query: 378 LKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTG 433
             S +  Q     S T + F  + ++I  E    + D LR + APE L G   +R     
Sbjct: 849 HASQLTCQTCGVTSTTYEAFWSISVEIPREGQCDVRDCLRSYCAPERLAGDELWRCPRCK 908

Query: 434 NAGVVTAKKSVKIQTLSKILILHLMRFSYG-SQGSTKLHKSVRFPLQ 479
                 A K + I    + L++H  RFS   ++ + K+   V FPLQ
Sbjct: 909 KDR--EAVKKITITRAPETLVIHFKRFSASRTESARKVRTPVHFPLQ 953


>gi|193787209|dbj|BAG52415.1| unnamed protein product [Homo sapiens]
          Length = 285

 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 58/179 (32%), Positives = 86/179 (48%), Gaps = 14/179 (7%)

Query: 304 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRT 362
           Q+D+QE L F+MD +H++L K           N  L    A E  W+     N+S +   
Sbjct: 33  QQDSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA- 91

Query: 363 QSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
                     +F GQ KS V+    +K S T + F+ L L + S +  T++D LRLFS  
Sbjct: 92  ----------LFQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKE 141

Query: 422 ENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
           E L +  R   +       + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 142 EKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 200


>gi|442748253|gb|JAA66286.1| Putative ubiquitin specific peptidase 2 [Ixodes ricinus]
          Length = 373

 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 123/288 (42%), Gaps = 32/288 (11%)

Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTA-FVGFVSD 255
           D  P GL N GN CF+N+ +Q L    P ++  L++  T +I         A F  F + 
Sbjct: 30  DKAPLGLRNLGNTCFMNSIVQCLAHTRPLLEYCLKDCYTSEINNITSSNRGALFEAFATL 89

Query: 256 FDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
             +    S+ +  IS         P  F + ++ F P           Q+D+QEFL +++
Sbjct: 90  MKSIWRSSNGEYAIS---------PQAFRSQIQKFAPRFMGY-----SQQDSQEFLHYLL 135

Query: 316 DQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
             +H+++ ++      +           E D+  +   K   A  R   F  S + D F 
Sbjct: 136 QGLHEDINRITSRPRHVT---------TEIDDNLSDSQKAAEAWKRYLRFDDSKIVDCFV 186

Query: 376 GQLKSVVKAQ--GNKASATVQPFLLLHLDI--YSEAVHTIEDALRLFSAPENLEGYRTSS 431
                 +K    G+K S T  PF  L L I   S++V TI+  L LF+  E L+G    +
Sbjct: 187 XXXXXTLKCSVCGHK-SVTFDPFWDLSLPIPKSSDSV-TIQQCLSLFTKEEVLDGDEKPT 244

Query: 432 TGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
             N        KS  I    KIL+LHL RFS G +   KL+  V FPL
Sbjct: 245 CSNCETRQRCTKSFTIHRCPKILVLHLKRFSPGERFRAKLNTRVEFPL 292


>gi|55742515|ref|NP_001006783.1| ubiquitin thiolesterase 3 [Xenopus (Silurana) tropicalis]
 gi|49523089|gb|AAH75590.1| ubiquitin specific peptidase 3 [Xenopus (Silurana) tropicalis]
          Length = 467

 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 140/322 (43%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   L   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 99  STTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRT------ 152

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G     N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 153 ----YHTRSQGDV---NVSLVEEFRKTLCALWQGNQTAFSPESLFYVVWKIMPN-FRGY- 203

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQGE    +G++ +++S A           NK  +   
Sbjct: 204 QQQDAHEFMRYLLDHLH---LELQGE---FDGSSHSVLSQANCSR----SASNKCCINGA 253

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
            + + S    +FGG L++ V        S    PFL L LDI S+               
Sbjct: 254 STVVTS----VFGGVLQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRCKNQENGPTC 309

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           T+ D LR F+  E L E    +         + K   IQ L K+L LHL RF + +    
Sbjct: 310 TLRDCLRSFTDLEELDETELYTCLKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 369

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 370 KVDTYVDFPLRGLDMKSFLLEP 391


>gi|417400194|gb|JAA47059.1| Putative ubiquitin carboxyl-terminal hydrolase 2 [Desmodus
           rotundus]
          Length = 396

 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 119/287 (41%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+  +      A    + +F     
Sbjct: 59  GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSS----NAHTALMEEF----- 109

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
            +   + I    +    SPS F+  ++ + P           Q+DAQEFL F++D +H  
Sbjct: 110 -AKLIQTIWTSSLNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGLH-- 161

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP---SALSDIFGGQL 378
                      N  N   V      E     P ++      + +L    S + D+F GQL
Sbjct: 162 -----------NAVNRVTVRPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQL 210

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 211 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 268

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                    K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 269 RCRTRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 315


>gi|149408831|ref|XP_001507996.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1
            [Ornithorhynchus anatinus]
          Length = 1116

 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 121/283 (42%), Gaps = 33/283 (11%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 776  GLRNLGNTCYMNSILQCLCNAPHLADYFNRNFYQEDINRSN------LLGHKGEVAEEFG 829

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  R  SP  F+  +      + +  SG   Q+D+QE L F+MD +H
Sbjct: 830  IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFSGY-SQQDSQELLLFLMDGLH 879

Query: 320  DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            ++L K           N  L    A E  W      N+S +             +F GQ 
Sbjct: 880  EDLNKADNRKRHKEENNDHLDDCRAAELAWHKHKQLNESIIV-----------ALFQGQF 928

Query: 379  KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
            KS V+    +K S T + F+ L L + S +  +++D LRLFS  E L +  R   +    
Sbjct: 929  KSTVQCLTCHKRSRTFEAFMYLSLPLASTSKCSLQDCLRLFSKEEKLTDNNRFYCSHCKT 988

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 989  RRDSLKKIEIWKLPPVLLVHLKRFSYEGRWKQKLQTSVDFPLE 1031


>gi|91084663|ref|XP_967750.1| PREDICTED: similar to ubiquitin specific protease 41 [Tribolium
           castaneum]
 gi|270008628|gb|EFA05076.1| hypothetical protein TcasGA2_TC015173 [Tribolium castaneum]
          Length = 764

 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 124/282 (43%), Gaps = 28/282 (9%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVG-FVSDFDTPS 260
           GL N GN CF+N+ +Q L +    ++ LLQ+    DI      T +A  G  +  F    
Sbjct: 425 GLKNIGNTCFMNSVIQCLSNTKTLLEYLLQDHYVNDIN----TTTSAMKGSLIKAF---- 476

Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                KK  S     R  + S  ++ ++ F P           Q+DAQEFL ++++ +H+
Sbjct: 477 -AEVIKKLWSQDASDRVVNTSSLKSQIQRFAPRFIGYA-----QQDAQEFLRYLLEGLHE 530

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
           ++ +++ +   I         + E DE  T   K+  +  R      S + D F GQLKS
Sbjct: 531 DVNRVKEKPKPI---------ITEIDEKLTDSEKSAESWNRYLRMDNSKIVDYFVGQLKS 581

Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHT-IEDALRLFSAPENLEG-YRTSSTGNAGV 437
            +K       S T  PF  L L I   A    +   L  F+  E L+G  + + +     
Sbjct: 582 TLKCTHCGHCSVTFDPFWDLSLPIPQRAGQVRLAQCLDSFTREETLDGDEKPTCSKCKER 641

Query: 438 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
               KS  IQ   KIL++HL RFS   +   KL  +V FPL+
Sbjct: 642 RKCTKSFTIQKFPKILVIHLKRFSLAERFRGKLSVTVDFPLE 683


>gi|354474362|ref|XP_003499400.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Cricetulus
           griseus]
          Length = 502

 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 141/322 (43%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 134 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 187

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G S   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 188 ----YHTRSQGDS---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 238

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG   +  S+ +E+   T+   NK  +   
Sbjct: 239 QQQDAHEFMRYLLDHLH---LELQG---GFNGVPRS--SILQEN--STLSANNKCCINGA 288

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 289 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQESGPVC 344

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 345 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 404

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 405 KVDTYVEFPLRGLDMKCYLLEP 426


>gi|296216400|ref|XP_002754520.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Callithrix
           jacchus]
          Length = 597

 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 124/283 (43%), Gaps = 43/283 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL N GN CF+N+ LQ L +        +ELR   + +           +V D    S  
Sbjct: 269 GLRNLGNTCFMNSILQCLSNT-------RELRDYCLHRL----------YVRDLHHGSNA 311

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
            +  +  S  ++    SPS F+  ++ + P           Q+DAQEFL F++D +H+E+
Sbjct: 312 HTALREASPNEV---VSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGLHNEV 363

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
            ++     S    N   +    +DE      K +    +      S + D+F GQLKS +
Sbjct: 364 NRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQLKSSL 413

Query: 383 KAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSSTGNAG 436
                   +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +     G
Sbjct: 414 TCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCCRCRG 471

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 472 RKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 514


>gi|444722556|gb|ELW63246.1| Ubiquitin carboxyl-terminal hydrolase 2 [Tupaia chinensis]
          Length = 395

 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 123/284 (43%), Gaps = 34/284 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+  +   T TA +   +       
Sbjct: 58  GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSS-STHTALMEEFAKLIQAIW 116

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
            SS    +S         PS F+  ++ + P           Q+DAQEFL F++D +H+E
Sbjct: 117 TSSPNDVVS---------PSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGLHNE 162

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
           + ++         +   L  L +++       K +    R      S + D+F GQLKS 
Sbjct: 163 VNRVTARP---KPSPENLDHLPDDE-------KGRQMWRRYLEREDSRIGDLFVGQLKSS 212

Query: 382 VKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSSTGNA 435
           +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +     
Sbjct: 213 LTCTDCGFCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCCRCR 270

Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                 K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 271 ARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 314


>gi|296213409|ref|XP_002753258.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
           [Callithrix jacchus]
          Length = 520

 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 142/322 (44%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G S   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 206 ----YHTRSQGDS---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+   T+   NK  +   
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLFASNKCCINGA 306

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 307 S----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEP 444


>gi|348583870|ref|XP_003477695.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Cavia
           porcellus]
          Length = 520

 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 139/323 (43%), Gaps = 57/323 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205

Query: 252 FVSDFDTPSGGSSK-------KKNISVLDIG--RPFSP-SMFEAVLKNFTPDVPNSISGR 301
               + T S G S        +K +  L  G    FSP S+F  V K     +PN   G 
Sbjct: 206 ----YHTRSQGDSSVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWK----IMPN-FRGY 256

Query: 302 PRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTR 361
            +Q+DA EF+ +++D +H   L+LQG    ++G  TA++      E  ++   NK  +  
Sbjct: 257 -QQQDAHEFMRYLLDHLH---LELQGGFNGVSG--TAIL-----QENSSLAASNKCCING 305

Query: 362 TQSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AV 408
                 + ++ +FGG L++ V        S    PFL L LDI S+             V
Sbjct: 306 AS----TVVTAVFGGVLQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPV 361

Query: 409 HTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS 467
            ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +   
Sbjct: 362 CSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLR 421

Query: 468 TKLHKSVRFPLQLVLGRDLLVTP 490
            K+   V FPL+ +  +  L+ P
Sbjct: 422 NKVDTYVEFPLRGLDMKCYLLEP 444


>gi|301756861|ref|XP_002914278.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Ailuropoda
           melanoleuca]
 gi|281347308|gb|EFB22892.1| hypothetical protein PANDA_002153 [Ailuropoda melanoleuca]
          Length = 520

 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 142/322 (44%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 152 STAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+   T+   NK  +   
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSASNKCCINGA 306

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 307 S----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 362

Query: 410 TIEDALRLFSAPENLEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L+               + K   IQ L K+L LHL RF + +    
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHRCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEP 444


>gi|410920842|ref|XP_003973892.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Takifugu
           rubripes]
          Length = 369

 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 125/287 (43%), Gaps = 44/287 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  A        D     
Sbjct: 36  GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 87

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD-- 320
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D  
Sbjct: 88  ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTVADIL 136

Query: 321 -ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
            E  K + ++  +    TA  + AE D        NK+  T         + DIF G L 
Sbjct: 137 QEEKKQEKQNGRLKNNGTAGATEAETD--------NKTEST--------WVHDIFQGTLT 180

Query: 380 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGV 437
           +  +       S+  + FL L +D+  E   +I   LR FS  E L   Y+         
Sbjct: 181 NETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEYKYYCETCCSK 238

Query: 438 VTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
             A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 239 QEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 285


>gi|47225852|emb|CAF98332.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 511

 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 134/315 (42%), Gaps = 56/315 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSD---FDTP 259
           GL N GN CF+NA LQ+L +   F    +EL          P ++   G  +    + T 
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFSCYFKEL----------PAVSLRSGKTAGRRMYHTR 209

Query: 260 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD--------VPNSISGRPRQEDAQEFL 311
           S G S   ++S+++  R    S+++     F+PD        +  S  G  +Q+DA EF+
Sbjct: 210 SQGES---SVSLVEEFRKTLCSLWQGSQTAFSPDSLFYTIWKIMPSFRGY-QQQDAHEFM 265

Query: 312 SFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 371
            +++D +H EL          N  N A  + + +D         K  +  T S + S   
Sbjct: 266 RYLLDHLHRELQ---------NSRNGASHTASPQDGVRLTAADGKCCINGTASVVTS--- 313

Query: 372 DIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRLF 418
            IFGG L++ V        S    PFL L LDI S+               T+ D LR F
Sbjct: 314 -IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRQKRSKDQEPGPTCTLSDCLRSF 372

Query: 419 SAPENLEGYRTSSTGNAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVR 475
           +  E L+   T           +KS K   +Q L K+L LHL RF + +    K+   V 
Sbjct: 373 TDLEELDD--TELYFCHKCKKRQKSTKKFWVQKLPKVLCLHLKRFHWTAFLRNKIDTYVE 430

Query: 476 FPLQLVLGRDLLVTP 490
           FPL+ +  R  L+ P
Sbjct: 431 FPLKGLDMRGYLLEP 445


>gi|345795041|ref|XP_544715.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Canis
           lupus familiaris]
          Length = 520

 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 152 STAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+   T+   NK  +   
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSASNKCCINGA 306

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 307 S----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 362

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEP 444


>gi|344251056|gb|EGW07160.1| Ubiquitin carboxyl-terminal hydrolase 3 [Cricetulus griseus]
          Length = 435

 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 141/322 (43%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 67  STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 120

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G S   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 121 ----YHTRSQGDS---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 171

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG   +  S+ +E+   T+   NK  +   
Sbjct: 172 QQQDAHEFMRYLLDHLH---LELQG---GFNGVPRS--SILQEN--STLSANNKCCINGA 221

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 222 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQESGPVC 277

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 278 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 337

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 338 KVDTYVEFPLRGLDMKCYLLEP 359


>gi|410212190|gb|JAA03314.1| ubiquitin specific peptidase 3 [Pan troglodytes]
 gi|410255768|gb|JAA15851.1| ubiquitin specific peptidase 3 [Pan troglodytes]
 gi|410292238|gb|JAA24719.1| ubiquitin specific peptidase 3 [Pan troglodytes]
 gi|410334293|gb|JAA36093.1| ubiquitin specific peptidase 3 [Pan troglodytes]
          Length = 520

 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+   T+   NK  +   
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSASNKCCINGA 306

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 307 S----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEP 444


>gi|332235881|ref|XP_003267133.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
           [Nomascus leucogenys]
          Length = 520

 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+   T+   NK  +   
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSASNKCCINGA 306

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 307 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEP 444


>gi|297696821|ref|XP_002825578.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3 [Pongo
           abelii]
          Length = 520

 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+   T+   NK  +   
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSASNKCCINGA 306

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 307 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEP 444


>gi|242040109|ref|XP_002467449.1| hypothetical protein SORBIDRAFT_01g028253 [Sorghum bicolor]
 gi|241921303|gb|EER94447.1| hypothetical protein SORBIDRAFT_01g028253 [Sorghum bicolor]
          Length = 306

 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 125/271 (46%), Gaps = 54/271 (19%)

Query: 211 CFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNIS 270
           CFLN  LQ ++   P   L+ +LR  D P    P   A +GF            +  N S
Sbjct: 2   CFLNCILQCMVHTVP---LVLKLRKTDHPD---PCPRASIGFCC-----YCSLKQHVNES 50

Query: 271 VLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGEST 330
           +   G  F P +F   LK+ + D  + +     Q+DAQEFL  ++D++ DE         
Sbjct: 51  IRLSGSSFYPEIFINRLKSISSDFKSGV-----QQDAQEFLRCLLDKL-DE--------- 95

Query: 331 SINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKA 389
                             +++ P++    + T+    S + +IF G LKS ++  + ++ 
Sbjct: 96  ------------------DSIAPRSSEESSTTKE--GSVVKEIFRGCLKSQLRCPECDRC 135

Query: 390 SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTL 449
           S   +PFL L LD+    V T+ DAL+ F+  E ++ +     G    V+ +K  KI+  
Sbjct: 136 SDKSEPFLDLSLDL--NMVETLMDALQSFTNTELIKDFMCD--GCKSRVSMEKHFKIEQA 191

Query: 450 SKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
            ++L++HL RF   +   +K+   V++PL+L
Sbjct: 192 PEVLVIHLKRF---TNSESKIWDKVKYPLEL 219


>gi|354504737|ref|XP_003514430.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 4
           [Cricetulus griseus]
          Length = 396

 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 124/295 (42%), Gaps = 56/295 (18%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+   G+ T  A    + +F     
Sbjct: 59  GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSNAHTALMEEF----- 109

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 110 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 160

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP---SALSDIFG 375
           H+E+             N   V      E     P ++      + +L    S + D+F 
Sbjct: 161 HNEV-------------NRVTVRPKPSPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFV 207

Query: 376 GQLKSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG---- 426
           GQLKS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G    
Sbjct: 208 GQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKP 265

Query: 427 --YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
             YR  +          K   +Q   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 266 TCYRCRARKRC-----IKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 315


>gi|426233170|ref|XP_004010590.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Ovis
           aries]
          Length = 520

 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 139/314 (44%), Gaps = 55/314 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVGFVSDFDTP 259
           GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T          + T 
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT----------YHTR 209

Query: 260 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRPRQEDAQEF 310
           S G S   N+S+++  R    ++++     F+P+         +PN   G  +Q+DA EF
Sbjct: 210 SQGDS---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY-QQQDAHEF 264

Query: 311 LSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSAL 370
           + +++D +H   L+LQG     NG + +  S+ +E+   T+   NK  +        + +
Sbjct: 265 MRYLLDHLH---LELQG---GFNGISRS--SILQEN--STLSASNKCCINGAS----TVV 310

Query: 371 SDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRL 417
           + IFGG L++ V        S    PFL L LDI S+               ++ D LR 
Sbjct: 311 TAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPTCSLRDCLRS 370

Query: 418 FSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRF 476
           F+  E L E              + K   IQ L K+L LHL RF + +    K+   V F
Sbjct: 371 FTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEF 430

Query: 477 PLQLVLGRDLLVTP 490
           PL+ +  +  L+ P
Sbjct: 431 PLRGLDMKCYLLEP 444


>gi|332253964|ref|XP_003276102.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like [Nomascus
           leucogenys]
          Length = 565

 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 130/310 (41%), Gaps = 61/310 (19%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF--DTPS 260
           GL N GN CFLNA LQ L S  P          RD                 DF  + P 
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPL---------RDF------------CLRRDFWQEVPG 251

Query: 261 GGSSKKKNISVLDI---------GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 311
           GG +++   +  D+             +P+ F AV + + P    S SG   Q+DAQEFL
Sbjct: 252 GGRAQELTEAFADVTGALWHPDSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFL 306

Query: 312 SFIMDQMHDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTR 361
             +M+++H E+ + +G       AN  + S       L EE E+      N   K  + R
Sbjct: 307 KLLMERLHLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPEFSDDDRANLMWKRYLER 365

Query: 362 TQSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALR 416
                 S   D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   
Sbjct: 366 ED----SKTVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFN 421

Query: 417 LFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SV 474
           LF   E LE             T + K + +Q   +IL+LHL RFS  S+GS K     V
Sbjct: 422 LFPKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGV 480

Query: 475 RFPLQ-LVLG 483
             PLQ L LG
Sbjct: 481 DLPLQRLSLG 490


>gi|21450103|ref|NP_659186.1| ubiquitin carboxyl-terminal hydrolase 3 [Mus musculus]
 gi|30580632|sp|Q91W36.1|UBP3_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
           Full=Deubiquitinating enzyme 3; AltName: Full=Ubiquitin
           thioesterase 3; AltName:
           Full=Ubiquitin-specific-processing protease 3
 gi|16877850|gb|AAH17156.1| Ubiquitin specific peptidase 3 [Mus musculus]
 gi|26327065|dbj|BAC27276.1| unnamed protein product [Mus musculus]
 gi|148694176|gb|EDL26123.1| ubiquitin specific peptidase 3 [Mus musculus]
          Length = 520

 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 142/322 (44%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G S   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 206 ----YHTRSQGDS---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+   T+   NK  +   
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSASNKCCINGA 306

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 307 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K L LHL RF + +    
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKALCLHLKRFHWTAYLRN 422

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V+FPL+ +  +  L+ P
Sbjct: 423 KVDTYVQFPLRGLDMKCYLLEP 444


>gi|375493565|ref|NP_001243631.1| ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Homo sapiens]
          Length = 476

 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 108 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 161

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 162 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 212

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+   T+   NK  +   
Sbjct: 213 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSASNKCCINGA 262

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 263 S----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 318

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 319 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 378

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 379 KVDTYVEFPLRGLDMKCYLLEP 400


>gi|55770886|ref|NP_006528.2| ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Homo sapiens]
 gi|205371844|sp|Q9Y6I4.2|UBP3_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
           Full=Deubiquitinating enzyme 3; AltName: Full=Ubiquitin
           thioesterase 3; AltName:
           Full=Ubiquitin-specific-processing protease 3
 gi|17390251|gb|AAH18113.1| Ubiquitin specific peptidase 3 [Homo sapiens]
 gi|30583377|gb|AAP35933.1| ubiquitin specific protease 3 [Homo sapiens]
 gi|61359968|gb|AAX41792.1| ubiquitin specific protease 3 [synthetic construct]
 gi|61359975|gb|AAX41793.1| ubiquitin specific protease 3 [synthetic construct]
 gi|76828049|gb|AAI07138.1| Ubiquitin specific peptidase 3 [Homo sapiens]
 gi|76828053|gb|AAI07139.1| Ubiquitin specific peptidase 3 [Homo sapiens]
 gi|112180754|gb|AAH65300.1| Ubiquitin specific peptidase 3 [Homo sapiens]
 gi|119598057|gb|EAW77651.1| ubiquitin specific peptidase 3 [Homo sapiens]
 gi|123980244|gb|ABM81951.1| ubiquitin specific peptidase 3 [synthetic construct]
 gi|123995059|gb|ABM85131.1| ubiquitin specific peptidase 3 [synthetic construct]
 gi|168277636|dbj|BAG10796.1| ubiquitin carboxyl-terminal hydrolase 3 [synthetic construct]
          Length = 520

 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+   T+   NK  +   
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSASNKCCINGA 306

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 307 S----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEP 444


>gi|388453361|ref|NP_001252999.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
 gi|383423389|gb|AFH34908.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
 gi|384939762|gb|AFI33486.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
          Length = 520

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+   T+   NK  +   
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSASNKCCINGA 306

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 307 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEP 444


>gi|47681481|gb|AAT37507.1| UBP protein [Homo sapiens]
          Length = 498

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 130 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 183

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 184 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 234

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+   T+   NK  +   
Sbjct: 235 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSASNKCCINGA 284

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 285 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 340

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 341 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 400

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 401 KVDTYVEFPLRGLDMKCYLLEP 422


>gi|345795043|ref|XP_865326.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Canis
           lupus familiaris]
          Length = 476

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 108 STAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 161

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 162 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 212

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+   T+   NK  +   
Sbjct: 213 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSASNKCCINGA 262

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 263 S----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 318

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 319 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 378

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 379 KVDTYVEFPLRGLDMKCYLLEP 400


>gi|297696819|ref|XP_002825577.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Pongo
           abelii]
 gi|332235885|ref|XP_003267135.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3
           [Nomascus leucogenys]
          Length = 476

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 108 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 161

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 162 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 212

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+   T+   NK  +   
Sbjct: 213 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSASNKCCINGA 262

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 263 S----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 318

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 319 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 378

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 379 KVDTYVEFPLRGLDMKCYLLEP 400


>gi|380798287|gb|AFE71019.1| ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca mulatta]
          Length = 491

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 123 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 176

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 177 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 227

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+   T+   NK  +   
Sbjct: 228 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSASNKCCINGA 277

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 278 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 333

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 334 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 393

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 394 KVDTYVEFPLRGLDMKCYLLEP 415


>gi|355692783|gb|EHH27386.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca mulatta]
 gi|355778099|gb|EHH63135.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca
           fascicularis]
          Length = 490

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 122 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 175

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 176 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 226

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+   T+   NK  +   
Sbjct: 227 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSASNKCCINGA 276

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 277 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 332

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 333 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 392

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 393 KVDTYVEFPLRGLDMKCYLLEP 414


>gi|313231914|emb|CBY09026.1| unnamed protein product [Oikopleura dioica]
          Length = 402

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 125/289 (43%), Gaps = 51/289 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GLIN GN C+ N+ LQAL  C PF + + E R     K    T  + +  ++D       
Sbjct: 28  GLINFGNTCYCNSVLQALYFCEPFRERVLEYR-----KQSKKTDGSLIWCLADLFNQLAA 82

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM----DQM 318
             K++         P  P+ F  +LK       N +     Q DAQEFL+F++    D +
Sbjct: 83  KKKRQ---------PIKPTKFVHMLKKENDAFDNVL-----QHDAQEFLNFLLNHIGDTL 128

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            DE+++ Q             VS  + D  +   P +         +  + + ++F G +
Sbjct: 129 RDEIVRNQK------------VSQTQSDTHQHNSPCD---------YQETWVHELFEGVM 167

Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRTSSTGNAG 436
            +V +  +    +   + FL L +DI  E   +I   L+ FSA E L+G ++        
Sbjct: 168 TNVTRCLRCESVNQKDERFLDLSVDI--EPNTSINHCLKSFSATETLKGEHKYYCEVCCS 225

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGS---QGSTKLHKSVRFPLQLVL 482
              A KS++I++  K+L LHL RF +        TKL   V F  QL +
Sbjct: 226 KQEAHKSLEIRSFPKVLALHLKRFRFEDGVRSHMTKLSYRVVFSRQLRI 274


>gi|194376096|dbj|BAG62807.1| unnamed protein product [Homo sapiens]
          Length = 476

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 108 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 161

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 162 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 212

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+   T+   NK  +   
Sbjct: 213 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSASNKCCINGA 262

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 263 S----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 318

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 319 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 378

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 379 KVDTYVEFPLRGLDMKCYLLEP 400


>gi|93279989|pdb|2GFO|A Chain A, Structure Of The Catalytic Domain Of Human Ubiquitin
           Carboxyl-terminal Hydrolase 8
          Length = 396

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 119/283 (42%), Gaps = 33/283 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C+ N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 64  GLRNLGNTCYXNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 117

Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
              K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+ D +H
Sbjct: 118 IIXK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLXDGLH 167

Query: 320 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           ++L K           N  L    A E  W+     N+S +             +F GQ 
Sbjct: 168 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 216

Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
           KS V+    +K S T + F  L L + S +  T++D LRLFS  E L +  R   +    
Sbjct: 217 KSTVQCLTCHKKSRTFEAFXYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 276

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 277 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 319


>gi|449472093|ref|XP_002191422.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Taeniopygia
           guttata]
          Length = 640

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 140/318 (44%), Gaps = 55/318 (17%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVGFVSD 255
           L   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T          
Sbjct: 276 LCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRT---------- 325

Query: 256 FDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRPRQED 306
           + T S G +   N+S+++  R    ++++     F+P+         +PN   G  +Q+D
Sbjct: 326 YHTRSQGDN---NVSLVEEFRKTLCALWQGNQTAFSPESLFYVVWKIMPN-FRGY-QQQD 380

Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
           A EF+ +++D +H   L+LQG     NG + +++ L E     ++   NK  +       
Sbjct: 381 AHEFMRYLLDHLH---LELQG---GFNGVSRSVI-LQENS---SLSASNKCCINGA---- 426

Query: 367 PSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIED 413
            + ++ IFGG L++ V        S    PFL L LDI S+             + T+ D
Sbjct: 427 STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRTKNQESGPMCTLRD 486

Query: 414 ALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 472
            LR F+  E L E              + K   IQ L K+L LHL RF + +    K+  
Sbjct: 487 CLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDT 546

Query: 473 SVRFPLQLVLGRDLLVTP 490
            V FPL+ +  +  L+ P
Sbjct: 547 YVEFPLRGLDMKCYLLEP 564


>gi|395746826|ref|XP_003778518.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Pongo abelii]
          Length = 498

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 130 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 183

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 184 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 234

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+   T+   NK  +   
Sbjct: 235 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSASNKCCINGA 284

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 285 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 340

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 341 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 400

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 401 KVDTYVEFPLRGLDMKCYLLEP 422


>gi|324515005|gb|ADY46059.1| Ubiquitin carboxyl-terminal hydrolase 46 [Ascaris suum]
          Length = 392

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 134/295 (45%), Gaps = 44/295 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPF----VQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 258
           GL+N GN C+ N+ +QAL  C PF    +Q  Q+L+     K    T  A        D 
Sbjct: 26  GLVNFGNTCYCNSVIQALYFCQPFREKILQYKQQLKKSGTQKENLLTCLA--------DL 77

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
               +++K+ +  +      +P  F   LK       N I     Q+DA EFL+++++ +
Sbjct: 78  FHNIATQKRRVGTI------APKRFITKLKK-----ENEIFDNYMQQDAHEFLNYLLNTI 126

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA-------LS 371
             E L  +  S   + AN     +A++     + P N +  +R+Q   PS        + 
Sbjct: 127 -SETLSEEKRSEKASKAN----GMAKKGS-SVINPSN-THDSRSQC-QPSGSKGESTWIH 178

Query: 372 DIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTS 430
           +IF G L +  +       S+  + FL L +D+   A  +I   LR+FS  E L+  +  
Sbjct: 179 EIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNA--SITHCLRVFSNMETLQADQKY 236

Query: 431 STGN-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL 482
              N      A+K ++++ L ++L LHL RF Y  Q S  TKL   V FPL+L L
Sbjct: 237 YCENCCSKQEAQKRMRVKKLPQLLALHLKRFKYVEQLSRYTKLSYRVLFPLELRL 291


>gi|332235883|ref|XP_003267134.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2
           [Nomascus leucogenys]
          Length = 498

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 130 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 183

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 184 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 234

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+   T+   NK  +   
Sbjct: 235 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSASNKCCINGA 284

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 285 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 340

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 341 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 400

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 401 KVDTYVEFPLRGLDMKCYLLEP 422


>gi|432853252|ref|XP_004067615.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Oryzias
           latipes]
          Length = 369

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 125/284 (44%), Gaps = 38/284 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  A        D     
Sbjct: 36  GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 87

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D +
Sbjct: 88  ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTVAD-I 135

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG       L       T  P+ ++ +       P+ + DIF G L +  
Sbjct: 136 LQEEKKQEKQNG------RLKNNGTPVTSEPEMENKIE------PTWVHDIFQGTLTNET 183

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 184 RCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEYKYYCETCCSKQEA 241

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
           +K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 242 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 285


>gi|270005509|gb|EFA01957.1| hypothetical protein TcasGA2_TC007573 [Tribolium castaneum]
          Length = 366

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 125/284 (44%), Gaps = 39/284 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF   + E + ++  +     LT            S  
Sbjct: 32  GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN-KRTKETLLTCLADLFH-----SIA 85

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           + KKK  S+       +P  F A L+    +  N +     Q+DA EFL+F+++ + + +
Sbjct: 86  TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHISEII 133

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L  + ++++ N   +                +N +A T  +   P+ + +IF G L S  
Sbjct: 134 LAERQQNSTTNNIKSKATG------------ENGTAHTTPE---PTWVHEIFQGILTSET 178

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT-A 440
           +       S+  + F  L +DI  E   +I   LR FS  E L         N      A
Sbjct: 179 RCLNCENVSSKDEDFFDLQVDI--EQNTSITHCLRCFSNTETLCSDNKFKCDNCSSYQEA 236

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL 482
           +K ++++ L  IL LHL RF Y  Q +   K+   V FPL+L L
Sbjct: 237 QKRMRVKKLPMILALHLKRFKYMEQYNRHIKVSHRVVFPLELRL 280


>gi|16552833|dbj|BAB71388.1| unnamed protein product [Homo sapiens]
          Length = 605

 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 120/287 (41%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+         A    V +F     
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 318

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 319 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 369

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++     S    N   +    +DE      K +    +      S + D+F GQL
Sbjct: 370 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 419

Query: 379 K-SVVKAQGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           K S+        S    PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 420 KGSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 477

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              G     K   IQ   KIL+L L RFS     ++KL   V FPL+
Sbjct: 478 RCRGRKRCIKKFSIQRFPKILVLRLKRFSESRIRTSKLTTFVNFPLR 524


>gi|426233172|ref|XP_004010591.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Ovis
           aries]
          Length = 476

 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 139/314 (44%), Gaps = 55/314 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVGFVSDFDTP 259
           GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T          + T 
Sbjct: 116 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT----------YHTR 165

Query: 260 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRPRQEDAQEF 310
           S G S   N+S+++  R    ++++     F+P+         +PN   G  +Q+DA EF
Sbjct: 166 SQGDS---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY-QQQDAHEF 220

Query: 311 LSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSAL 370
           + +++D +H   L+LQG     NG + +  S+ +E+   T+   NK  +        + +
Sbjct: 221 MRYLLDHLH---LELQG---GFNGISRS--SILQEN--STLSASNKCCINGAS----TVV 266

Query: 371 SDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRL 417
           + IFGG L++ V        S    PFL L LDI S+               ++ D LR 
Sbjct: 267 TAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPTCSLRDCLRS 326

Query: 418 FSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRF 476
           F+  E L E              + K   IQ L K+L LHL RF + +    K+   V F
Sbjct: 327 FTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEF 386

Query: 477 PLQLVLGRDLLVTP 490
           PL+ +  +  L+ P
Sbjct: 387 PLRGLDMKCYLLEP 400


>gi|356563968|ref|XP_003550229.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
           max]
          Length = 735

 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 132/318 (41%), Gaps = 76/318 (23%)

Query: 188 AINEPVKSVKDLL------------------PRGLINSGNLCFLNATLQALMSCSPFV-Q 228
           AI+ P+K  KD+L                  P GL+N GN CF N  LQ L    P V  
Sbjct: 152 AISRPIKQAKDVLFPYDEFVKFFNWDKPGFPPCGLLNCGNSCFANVVLQCLSFTKPLVAY 211

Query: 229 LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLK 288
           LL++   R+     +  L  F   V           ++  +S     + FSP    + L 
Sbjct: 212 LLEKGHRRECSCNDWCFLCEFENHV-----------ERTRLS----SQAFSPMNILSRL- 255

Query: 289 NFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEW 348
              P++  ++ G  +QEDA EF+ F +D M    L   G   ++                
Sbjct: 256 ---PNIGGTL-GYGKQEDAHEFMRFSIDTMQSVCLDEFGGEKAV---------------- 295

Query: 349 ETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS-VVKAQGNKASATVQPFLLLHLDIYSEA 407
               P N    T  Q         IFGG+L+S V+  + +K S   +  + L ++I+ +A
Sbjct: 296 ----PPNLQETTLIQH--------IFGGRLQSEVICTKCDKISNQYENMMDLTVEIHGDA 343

Query: 408 VHTIEDALRLFSAPENLEG---YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS 464
             ++E+ L  F+A E L+G   Y+    G    V A K + ++    IL + L RF  G 
Sbjct: 344 A-SLEECLDQFTAKERLDGENMYKCE--GCKDYVKAWKRLTVKCAPNILTIALKRFQSGR 400

Query: 465 QGSTKLHKSVRFPLQLVL 482
            G  KL+K + FP  L L
Sbjct: 401 FG--KLNKRIAFPETLNL 416


>gi|114657520|ref|XP_001173962.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3 [Pan
           troglodytes]
          Length = 498

 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 130 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 183

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 184 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 234

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+   T+   NK  +   
Sbjct: 235 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSASNKCCINGA 284

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 285 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 340

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 341 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 400

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 401 KVDTYVEFPLRGLDMKCYLLEP 422


>gi|403182891|gb|EJY57700.1| AAEL017004-PA [Aedes aegypti]
          Length = 666

 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 123/294 (41%), Gaps = 50/294 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + + E + ++  +     LT            S  
Sbjct: 323 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKN-KRTKETLLTCLADLFY-----SIA 376

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           + KKK  S+       +P  F A L+    +  N +     Q+DA EFL+F+++ +++ +
Sbjct: 377 TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 424

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL----------PSALSD 372
           L    E     GA T+             G KN   +      L          P+ + +
Sbjct: 425 L---AERNQAKGAGTS-------------GSKNAGTIGGGGGSLNGDNPGQPQEPTWVHE 468

Query: 373 IFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSS 431
           IF G L S  +       S+  + F  L +D+      +I   LR FS  E L       
Sbjct: 469 IFQGILTSETRCLNCETVSSKDENFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFK 526

Query: 432 TGN-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVR--FPLQLVL 482
             N      A+K ++++ L  IL LHL RF Y  Q +  +  S R  FPL+L L
Sbjct: 527 CDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQYNRHIKVSHRVVFPLELRL 580


>gi|348505611|ref|XP_003440354.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Oreochromis
           niloticus]
          Length = 623

 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 142/348 (40%), Gaps = 58/348 (16%)

Query: 175 NSSISGSKEVPMKAINEPV---KSVKD-----LLPRGLINSGNLCFLNATLQALMSCSPF 226
           NS++ G ++   K  + P    K +KD     L   GL N GN CF+NA LQ+L +   F
Sbjct: 125 NSALMGERQRKRKLQDSPAGDGKLLKDSDGVALGATGLRNLGNTCFMNAILQSLSNIEQF 184

Query: 227 VQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAV 286
               +EL          P +    G  +        S    ++S+++  R    S+++  
Sbjct: 185 SCYFKEL----------PAVALRSGKTAGRRMYHTRSQGDNSVSLVEEFRKTLCSLWQGN 234

Query: 287 LKNFTPD--------VPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTA 338
              F+PD        +  S  G  +Q+DA EF+ +++D +H EL        S NGA+  
Sbjct: 235 QTAFSPDSLFYAIWKIMPSFRGY-QQQDAHEFMRYLLDHLHREL------QYSRNGASHP 287

Query: 339 LVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFL 397
              L+ +D         K     T S + S    IFGG L++ V        S    PFL
Sbjct: 288 ---LSPQDGVRLSSTDGKCCTNGTASVVTS----IFGGILQNEVNCLICGTESRKFDPFL 340

Query: 398 LLHLDIYSE------------AVHTIEDALRLFSAPENL---EGYRTSSTGNAGVVTAKK 442
            L LDI S+               T+ D L  F+  E L   E Y           T  K
Sbjct: 341 DLSLDIPSQFRQKRNKDQEPVPTCTLRDCLHSFTDLEELDDTELYYCHKCKKRQKST--K 398

Query: 443 SVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP 490
              IQ L K+L LHL RF + +    K+   V FPL+ +  R  L+ P
Sbjct: 399 KFWIQKLPKVLCLHLKRFHWTAFLRNKVDTYVEFPLKGLDMRGYLLEP 446


>gi|431895934|gb|ELK05352.1| Ubiquitin carboxyl-terminal hydrolase 3 [Pteropus alecto]
          Length = 520

 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+   T+   NK  +   
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSASNKCCINGA 306

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 307 ----STVVTAIFGGFLQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 362

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 423 KVDIYVEFPLRGLDMKCYLLEP 444


>gi|126277020|ref|XP_001366252.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Monodelphis
           domestica]
          Length = 520

 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 141/322 (43%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   L   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 152 STTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRT------ 205

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +++ L E     ++   NK  +   
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSVI-LQENS---SLSASNKCCINGA 306

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             + 
Sbjct: 307 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPLC 362

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEP 444


>gi|67968614|dbj|BAE00666.1| unnamed protein product [Macaca fascicularis]
          Length = 435

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 67  STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 120

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 121 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRG-Y 171

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+   T+   NK  +   
Sbjct: 172 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSASNKCCINGA 221

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSEA------------VH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 222 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 277

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 278 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 337

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 338 KVDTYVEFPLRGLDMKCYLLEP 359


>gi|410908997|ref|XP_003967977.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Takifugu
           rubripes]
 gi|47223359|emb|CAG04220.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 372

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 142/336 (42%), Gaps = 60/336 (17%)

Query: 153 ISKFHVLCDGNIDGRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCF 212
           +SKF   C         NA+A    I GS++ P   +NE           GL+N GN C+
Sbjct: 7   VSKFTSFCTMG-----ANASALEKEI-GSEQFP---VNEHY--------FGLVNFGNTCY 49

Query: 213 LNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVL 272
            N+ LQAL  C PF + +  L  R  P+     LT         D     +++K+ + V+
Sbjct: 50  CNSVLQALYFCRPFREKI--LAYRSQPRRKENLLTCLA------DLFHSIANQKRKVGVI 101

Query: 273 DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSI 332
                  P  F   L+       N +     Q+DA EFL+++++ + D LL+ + +    
Sbjct: 102 ------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-LLQEERKQEKT 149

Query: 333 NG--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKA 389
           NG  AN  L S             N S  T      P+ + +IF G L +  +       
Sbjct: 150 NGRLANGTLDS-----------QNNNSNATPA----PTWVHEIFQGTLTNETRCLTCETI 194

Query: 390 SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQT 448
           S+  + FL L +D+  E   +I   LR FS  E L   Y+           A K ++++ 
Sbjct: 195 SSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKK 252

Query: 449 LSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVL 482
           L  IL LHL RF Y    Q  TKL   V FPL+L L
Sbjct: 253 LPMILALHLKRFKYMEQLQRYTKLSYRVVFPLELRL 288


>gi|348512186|ref|XP_003443624.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
           [Oreochromis niloticus]
 gi|432928205|ref|XP_004081104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Oryzias
           latipes]
          Length = 372

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 142/336 (42%), Gaps = 60/336 (17%)

Query: 153 ISKFHVLCDGNIDGRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCF 212
           +SKF   C         NA+A    I GS++ P   +NE           GL+N GN C+
Sbjct: 7   VSKFASFCTMG-----ANASALEKEI-GSEQFP---VNEHY--------FGLVNFGNTCY 49

Query: 213 LNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVL 272
            N+ LQAL  C PF + +  L  R  P+     LT         D     +++K+ + V+
Sbjct: 50  CNSVLQALYFCRPFREKI--LAYRSQPRRKENLLTCLA------DLFHSIANQKRKVGVI 101

Query: 273 DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSI 332
                  P  F   L+       N +     Q+DA EFL+++++ + D LL+ + +    
Sbjct: 102 ------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-LLQEERKQEKT 149

Query: 333 NG--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKA 389
           NG  AN  L S             N S  T      P+ + +IF G L +  +       
Sbjct: 150 NGRLANGTLDS-----------QNNNSNATPA----PTWVHEIFQGTLTNETRCLTCETI 194

Query: 390 SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQT 448
           S+  + FL L +D+  E   +I   LR FS  E L   Y+           A K ++++ 
Sbjct: 195 SSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKK 252

Query: 449 LSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVL 482
           L  IL LHL RF Y    Q  TKL   V FPL+L L
Sbjct: 253 LPMILALHLKRFKYMEQLQRYTKLSYRVVFPLELRL 288


>gi|90075368|dbj|BAE87364.1| unnamed protein product [Macaca fascicularis]
          Length = 431

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 63  STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 116

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 117 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 167

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+   T+   NK  +   
Sbjct: 168 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSASNKCCINGA 217

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSEA------------VH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 218 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 273

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 274 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 333

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 334 KVDTYVEFPLRGLDMKCYLLEP 355


>gi|395746828|ref|XP_003778519.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Pongo abelii]
          Length = 431

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 63  STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 116

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 117 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 167

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+   T+   NK  +   
Sbjct: 168 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSASNKCCINGA 217

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSEA------------VH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 218 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 273

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 274 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 333

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 334 KVDTYVEFPLRGLDMKCYLLEP 355


>gi|365985329|ref|XP_003669497.1| hypothetical protein NDAI_0C05950 [Naumovozyma dairenensis CBS 421]
 gi|343768265|emb|CCD24254.1| hypothetical protein NDAI_0C05950 [Naumovozyma dairenensis CBS 421]
          Length = 1080

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 98/216 (45%), Gaps = 60/216 (27%)

Query: 304 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEE------------------ 345
           QEDA+EFL+ ++DQ+H+E++    E  + N     L S+ +E                  
Sbjct: 750 QEDAEEFLTQLLDQLHEEIISA-IECLTDNEIENLLQSITDEQLKIFIIRNLSRYNKAEF 808

Query: 346 -----------------------------DEWETV------GPKNKSAVTRTQSFLPSAL 370
                                        +EW  V      G KNK+AV RT    PS +
Sbjct: 809 ITKISPKLKELINKYGTMTDDTNDSGDSSNEWHEVSGTSKKGKKNKTAVKRTVDVTPSPI 868

Query: 371 SDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYR 428
           S+IFGGQ +SV+    NK S   T+ PF  + LDI    ++ +E A + FS  E L  ++
Sbjct: 869 SNIFGGQFRSVLDIPFNKESQSITLDPFQTIQLDISDPMINDLETAFKKFSEFE-LLPFK 927

Query: 429 TSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS 464
           +SS  +   V AKK   I  L ++L++ L RFS+ S
Sbjct: 928 SSSGKD---VEAKKQTFIDKLPQVLLIQLKRFSFVS 960



 Score = 55.1 bits (131), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 4/66 (6%)

Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPT----LTAFVG 251
           +K ++ RG++N  N+CF+++ LQ L+SC PF+ +L    TR++     P+    L A V 
Sbjct: 560 IKSIVSRGIVNVANICFMSSILQMLLSCKPFIDVLNVTSTRNLNSRVGPSSTKLLDACVA 619

Query: 252 FVSDFD 257
             S+FD
Sbjct: 620 LYSEFD 625


>gi|389739172|gb|EIM80366.1| hypothetical protein STEHIDRAFT_172638 [Stereum hirsutum FP-91666
            SS1]
          Length = 1408

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 128/291 (43%), Gaps = 42/291 (14%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
            GL N GN C++NAT+Q L +  PF +   E R R           A V  ++   T    
Sbjct: 1049 GLRNLGNTCYMNATMQCLSATVPFARFFTEGRWR-----------AAVNMMNKMGTKGAI 1097

Query: 263  SSKKKNISVLDIGRP----FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
            +    +I + +I +     FSP  F   + ++      S      Q D+QEFLS+++D +
Sbjct: 1098 AQAFAHI-LHEIWQGEMSFFSPISFRRSICSYASQFAGS-----EQHDSQEFLSWLLDAL 1151

Query: 319  HDELLKLQGEST-SINGANTALV-----SLAEEDEWETVGPKNKSAVTRTQSFLPSALSD 372
            H++L ++  +ST  +     A +      +A E EW     +N S V            D
Sbjct: 1152 HEDLNRVISKSTYEVTPEREAELEKLPQQIASEQEWRIYRMRNDSIVV-----------D 1200

Query: 373  IFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYS--EAVHTIEDALRLFSAPENLEGYRT 429
             F GQ ++ ++    +K S T   F+ L L + +      T+++ L  F   E +E    
Sbjct: 1201 FFQGQFRNRMECMTCHKTSTTYNSFMNLSLPVPTSKHGKITLQNCLDAFVKEEVMEKSDA 1260

Query: 430  SSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
             +  N  V+  A K + +  L  +L++   RFS+    + K+ K V FPL+
Sbjct: 1261 WNCPNCKVLRKATKQLSLSRLPPVLLIQFKRFSFKGPFTDKIDKHVDFPLK 1311


>gi|356509862|ref|XP_003523663.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
           max]
          Length = 742

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 126/287 (43%), Gaps = 58/287 (20%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTP 259
           P GL+N GN CF N  LQ L    P +  LL++   R+     +        F+ +F+T 
Sbjct: 177 PCGLLNCGNSCFANVVLQCLSFTRPLIAFLLEKGHHRECCHNDW-------CFLCEFET- 228

Query: 260 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
                +K  +S     + FSP    + L    P++  ++ G  RQEDA EF+ F +D M 
Sbjct: 229 ---HVEKVRLS----SQAFSPMNILSRL----PNISGTL-GYGRQEDAHEFMRFSIDAMQ 276

Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
                               V L E    + V P+N+           + +  IFGG L+
Sbjct: 277 S-------------------VCLDEFGGEKVVPPRNQET---------TLIQHIFGGHLQ 308

Query: 380 S-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNA 435
           S V+  +  K S   +  + L ++I+ +A  ++E+ L  F+A E L G   Y+    G  
Sbjct: 309 SEVICTECEKNSNQYENMMDLTVEIHGDAA-SLEECLDQFTAKEWLHGDNMYKCD--GCK 365

Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 482
           G V A K + ++    IL + L RF  G  G  KL+K V FP  L L
Sbjct: 366 GYVKAWKRLTVKQAPNILTIALKRFQSGRFG--KLNKRVTFPETLDL 410


>gi|299856909|pdb|3NHE|A Chain A, High Resolution Structure (1.26a) Of Usp2a In Complex With
           Ubiquitin
          Length = 348

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 122/287 (42%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN  F+N+ LQ L +        LQ L  RD+         A    V +F     
Sbjct: 11  GLRNLGNTXFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 61

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 62  ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 112

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++     S    N   +    +DE      K +    +      S + D+F GQL
Sbjct: 113 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 162

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 163 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 220

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              G     K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 221 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 267


>gi|440907019|gb|ELR57212.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Bos grunniens
           mutus]
          Length = 492

 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 124 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 177

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G   + N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 178 ----YHTRSQG---ENNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 228

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  S+ +E+   T+   NK  +   
Sbjct: 229 QQQDAHEFMRYLLDHLH---LELQG---GFNGISRS--SILQEN--STLSASNKCCINGA 278

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSEAVH------------ 409
                + ++ IFGG L++ V        S    PFL L LDI S+  +            
Sbjct: 279 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPTC 334

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 335 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 394

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 395 KVDTYVEFPLRGLDMKCYLLEP 416


>gi|390337799|ref|XP_783431.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
           [Strongylocentrotus purpuratus]
          Length = 370

 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 125/284 (44%), Gaps = 37/284 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF   +   +T   PK     LT      +  +T    
Sbjct: 35  GLVNFGNTCYCNSVLQALYFCKPFRDRVLAYKT--APKKKETLLTCLSDLFNSINT---- 88

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
             +KK + V+      +P  F A LK       N +     Q+DA EFL ++++ + D L
Sbjct: 89  --QKKKVGVV------APKKFVARLKK-----ENEVFDNYMQQDAHEFLIYLLNTIAD-L 134

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + ++  I G                      +   +T+   P+ + +IF G L +  
Sbjct: 135 LQAERKADKIAGKGKPGTP--------NGIINGNNNDMKTE---PTWIHEIFQGTLTNET 183

Query: 383 KAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +    +  S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 184 RCLCCEGVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCHEYKYYCETCCSKQEA 241

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL 482
           +K ++++ L ++L LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 242 QKRMQVKKLPQLLALHLKRFKYMEQSHRYTKLSYRVVFPLELRL 285


>gi|431916120|gb|ELK16374.1| Ubiquitin carboxyl-terminal hydrolase 21 [Pteropus alecto]
          Length = 593

 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 135/327 (41%), Gaps = 67/327 (20%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313

Query: 319 HDELLKLQGESTSI------------NGANTALVSLAEEDE----WETVGPKNKSAVT-- 360
           H E+ +    +  +             GA  A   L+++D     W+    +  S +   
Sbjct: 314 HLEVNRRGRRAAPLLAGSPAPSPPRRAGARPAEPELSDDDRANLMWKRYLEREDSKIVGM 373

Query: 361 ----------------RTQSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI 403
                           R     P    D+F GQLKS +K Q     S T + F  L L I
Sbjct: 374 ERARQRGSRGTLTGCGRKTGRCPRG-RDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPI 432

Query: 404 ----YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLM 458
               ++    ++ D   LF+  E LE             T + K + +Q   +IL+LHL 
Sbjct: 433 PKKGFAGGKVSLRDCFSLFTKEEELELENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLN 492

Query: 459 RFSYGSQGSTKLHK-SVRFPLQ-LVLG 483
           RFS  S+GS K     V FPLQ L LG
Sbjct: 493 RFS-ASRGSIKKSSVGVDFPLQRLSLG 518


>gi|351705889|gb|EHB08808.1| Ubiquitin carboxyl-terminal hydrolase 2 [Heterocephalus glaber]
          Length = 612

 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 124/287 (43%), Gaps = 40/287 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  +D+      T +     + +F     
Sbjct: 275 GLRNLGNTCFMNSILQCLSNTRELKDYCLQRLYMQDLSH----TSSTHTALMEEF----- 325

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 326 ----AKLIQTIWTSCPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 376

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++    T    +N   ++   +DE      K +    +      S + D+F GQL
Sbjct: 377 HNEVNRV----TVRPKSNPENLNHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 426

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 427 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRSYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 484

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                    K   IQ    IL+LHL RFS     ++KL   V FPL+
Sbjct: 485 CCRARKRCIKKFSIQRFPTILVLHLKRFSESRIRTSKLTTFVNFPLR 531


>gi|402223712|gb|EJU03776.1| cysteine proteinase [Dacryopinax sp. DJM-731 SS1]
          Length = 434

 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 126/295 (42%), Gaps = 48/295 (16%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLT------AFVGFVSDF 256
           GL N GN C++NA LQ L +  PF +   E R +       P  T      AF   V + 
Sbjct: 72  GLKNLGNTCYMNAPLQCLSATVPFARFFLENRWQRAVNTVNPLGTRGQLAGAFAKMVQEM 131

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
                    + N + LD      P+ F   + ++ P    S +G   Q DAQEF+SF++D
Sbjct: 132 --------WQANFTYLD------PTNFRRSVCHYAP----SFAGG-DQHDAQEFISFLLD 172

Query: 317 QMHDELLKL-----QGESTSINGANTALV--SLAEEDEWETVGPKNKSAVTRTQSFLPSA 369
            +H++L ++       + T  + A    +   +A E EW+    ++ S V          
Sbjct: 173 GLHEDLNRILQKPANDDPTPEHEAELERLPQQIAGEQEWQRYQRRDDSLVV--------- 223

Query: 370 LSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYS---EAVHTIEDALRLFSAPENLE 425
             D F GQ ++ ++    +K S T   F+ L L I +    +  T++  +  F   E +E
Sbjct: 224 --DYFQGQFRNKLECMTCHKTSTTYNAFMYLSLPIPTGRGMSKVTLQQCMDAFVKEEIME 281

Query: 426 -GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
            G          +  A K + I  L  +L++HL RFSY      KL   V FPL+
Sbjct: 282 KGDAWKCPHCMALRKATKQLSISRLPPVLLIHLKRFSYKGPFVDKLETLVDFPLK 336


>gi|350276273|ref|NP_001231910.1| ubiquitin carboxyl-terminal hydrolase 46 [Danio rerio]
 gi|251765180|sp|A5WWB0.2|UBP46_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 46; AltName:
           Full=Deubiquitinating enzyme 46; AltName: Full=Ubiquitin
           thioesterase 46; AltName:
           Full=Ubiquitin-specific-processing protease 46
          Length = 370

 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 126/287 (43%), Gaps = 43/287 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  A        D     
Sbjct: 36  GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKVQQKKKENLLTCLA--------DLFHSI 87

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD-- 320
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D  
Sbjct: 88  ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTVADIL 136

Query: 321 -ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
            E  K + ++  +    TA+ +       +T   +NK          P+ + +IF G L 
Sbjct: 137 QEERKQEKQNGRLKNNGTAIAT-------DTEPEQNKID--------PTWVHEIFQGTLT 181

Query: 380 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGV 437
           +  +       S+  + FL L +D+  E   +I   LR FS  E L   Y+         
Sbjct: 182 NETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEYKYYCEMCCSK 239

Query: 438 VTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
             A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 240 QEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 286


>gi|432092259|gb|ELK24883.1| Ubiquitin carboxyl-terminal hydrolase 3 [Myotis davidii]
          Length = 449

 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 140/322 (43%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 81  STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 134

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 135 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 185

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + + + L E     T+   NK  +   
Sbjct: 186 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSCSPI-LQENS---TLSASNKCCINGA 235

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 236 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 291

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 292 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 351

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 352 KVDTYVEFPLRGLDMKCYLLEP 373


>gi|242024423|ref|XP_002432627.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
           corporis]
 gi|212518097|gb|EEB19889.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
           corporis]
          Length = 462

 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 132/312 (42%), Gaps = 34/312 (10%)

Query: 175 NSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQEL 233
           N  +SG+        N  V S +     GL N GN CF+N+ LQ L +  P ++ LL E 
Sbjct: 95  NLGLSGNSPRSSAGKNRNVSSTEKGGLNGLKNIGNTCFMNSVLQCLSNTKPLLEYLLHEE 154

Query: 234 RTRD----IPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKN 289
              D    I       + AF   + +   P   +++ K I+  +         F++ ++ 
Sbjct: 155 YMTDINFTISAMKGSLIKAFSNVIQELWAP---NAEDKIINTTN---------FKSQIQK 202

Query: 290 FTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWE 349
           F P           Q+DAQEFL ++++ +H+++ ++  +   I         L + D+  
Sbjct: 203 FAPRFMGYA-----QQDAQEFLRYLLEGLHEDVNRVTVKPQQI---------LTDIDDSL 248

Query: 350 TVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSEAV 408
           +   K   A  R      S + DIF GQLKS ++       S T  PF  L L + S   
Sbjct: 249 SDNQKATEAWKRYLRMDDSKVVDIFVGQLKSTLQCTVCGHCSVTFDPFWDLSLPVPSRTG 308

Query: 409 H-TIEDALRLFSAPENLEGYRTSSTGNAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQG 466
              ++  L  F+  E L+G    +           KS  IQ   KIL+LHL RFS   + 
Sbjct: 309 QPKLQSCLDAFTKEEVLDGEEKPTCSKCETRRKCTKSFSIQKFPKILVLHLKRFSPTERY 368

Query: 467 STKLHKSVRFPL 478
             KL  +V FPL
Sbjct: 369 RGKLSITVDFPL 380


>gi|350596143|ref|XP_003360823.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like [Sus
           scrofa]
          Length = 1147

 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 108/243 (44%), Gaps = 51/243 (20%)

Query: 296 NSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSI---NGANTALVSLAE-------- 344
           +S++ R RQEDA+E+L FI++ +H+E+         +   NG  + LV   E        
Sbjct: 527 SSLTERGRQEDAEEYLGFILNGLHEEMXXXXXXXXXLTVSNGPQSHLVDEDEQEEPGEGS 586

Query: 345 EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS------------------------ 380
           EDEWE VGP+NK++VTR   F+ + ++ IFGG ++S                        
Sbjct: 587 EDEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSWTWWFALTVRLSVLGPPAALPPRP 646

Query: 381 -----VVKAQGNKA---SATVQPFLLL-HLDIYSEAVHTIEDALRLFSAPENLEGYRTSS 431
                +V A    A    ++V P +L       +E   +     RL +A     G   S 
Sbjct: 647 LLSTLLVPALPQWALPSLSSVYPSVLCSQAKKKAELAASSWGGGRLPTACTPRPGLCQSX 706

Query: 432 TGNAGVVTAKKSVKI------QTLSKILILHLMRFSY-GSQGSTKLHKSVRFPLQLVLGR 484
           +        K+ V+I      + L  +L+LHL RF Y  + G  KL K++ +PL +    
Sbjct: 707 SVQGYTTKTKQEVEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEYPLSIFCLS 766

Query: 485 DLL 487
           +LL
Sbjct: 767 ELL 769


>gi|327288428|ref|XP_003228928.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Anolis
           carolinensis]
          Length = 1066

 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 120/283 (42%), Gaps = 33/283 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++N+ LQ L +         +     DI ++       F+G   +     G
Sbjct: 726 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNYYQVDINRSN------FLGHKGEVAEEFG 779

Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
              K      L  G  R  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 780 IIMK-----ALWAGQYRYISPKDFKMTIGK----INDQFAGY-SQQDSQELLLFLMDDLH 829

Query: 320 DELLKLQGESTSINGANTALVSLAEED-EWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           ++L K           N  L      D  W      N+S +             +F GQ 
Sbjct: 830 EDLNKADNRKRYKEENNDDLDDPKAADLAWHKHKQLNESIIVA-----------LFQGQF 878

Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 436
           KS V+    +K S T + F+ L L + S +  T+++  RLFS  E L +  R   +    
Sbjct: 879 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQECFRLFSKEEKLTDNNRFYCSHCKT 938

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 939 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 981


>gi|213983223|ref|NP_001135522.1| ubiquitin specific peptidase 2 [Xenopus (Silurana) tropicalis]
 gi|195540057|gb|AAI67952.1| Unknown (protein for MGC:147993) [Xenopus (Silurana) tropicalis]
          Length = 383

 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 114/284 (40%), Gaps = 35/284 (12%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDI--PKAGYPTLTAFVGFVSDFDTP 259
           GL N GN CF+N+ LQ L +        LQ    RD+   K     +  F   +    T 
Sbjct: 47  GLRNLGNTCFMNSILQCLSNTKDLRDYCLQNSYRRDLSSKKCNTAIMEEFARLLQAIWTS 106

Query: 260 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
           S                  SPS F+  ++ + P           Q+DAQEFL F++D +H
Sbjct: 107 SANEV-------------VSPSEFKTQIQKYAPRFMGY-----NQQDAQEFLRFLLDGLH 148

Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
           +E          +N         +++ +      K K    R      S + ++F GQLK
Sbjct: 149 NE----------VNRVTVKPRPSSQDLDHMPDSEKGKHMWKRYLEREDSRIVELFVGQLK 198

Query: 380 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIE--DALRLFSAPENLEG-YRTSSTGNA 435
           S +   +    S    PF  L L I  ++   +   D +RLF+  + L+G  + +     
Sbjct: 199 SSLTCTECGYCSTVFDPFWDLSLPIAKKSASEVSLVDCMRLFTKEDVLDGDEKPTCCRCK 258

Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                 K   IQ   KIL+LHL RFS G   S KL   V FPL+
Sbjct: 259 ARRRCTKKFTIQKFPKILVLHLKRFSEGRIRSGKLSTFVNFPLK 302


>gi|193785704|dbj|BAG51139.1| unnamed protein product [Homo sapiens]
          Length = 356

 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 137/311 (44%), Gaps = 55/311 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 67  STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 120

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 121 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRG-Y 171

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+   T+   NK  +   
Sbjct: 172 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--STLSASNKCCINGA 221

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSEA------------VH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 222 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 277

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 278 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 337

Query: 469 KLHKSVRFPLQ 479
           K+   V FPL+
Sbjct: 338 KVDTYVEFPLR 348


>gi|328698286|ref|XP_001952840.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like
           [Acyrthosiphon pisum]
          Length = 385

 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 129/284 (45%), Gaps = 29/284 (10%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF   + E + R+  K    TL   +      D     
Sbjct: 25  GLVNFGNTCYSNSVLQALYFCKPFRDKVLEYKARN--KRNKETLLTCLA-----DLFHSI 77

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK +  +      +P  F   L+    +  N +     Q+DA EFL+F+++ + +E+
Sbjct: 78  ATQKKKVGSI------APKKFINRLRKEKEEFNNYM-----QQDAHEFLNFLINHI-NEI 125

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           +  +   T+ NG + ++     + E  T    + S+  +     P+ + +IF G L S  
Sbjct: 126 ILSERNQTNCNGKSKSITPNIVDGESTTSSITSSSSHNQD----PTWVHEIFQGILTSET 181

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN-AGVVTA 440
           +     + S+  + F  L +DI      +I   LR FS  E L         N      A
Sbjct: 182 RCLNCEEVSSKDEDFFDLQVDIDQNT--SITHCLRCFSNTEMLCSDNKFKCDNCCSYQEA 239

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL 482
           +K ++++ L  IL LHL RF Y  Q +   K+   V FPL+L L
Sbjct: 240 QKCMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPLELRL 283


>gi|397635885|gb|EJK72050.1| hypothetical protein THAOC_06457, partial [Thalassiosira oceanica]
          Length = 528

 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 127/286 (44%), Gaps = 40/286 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL N GN CFLN+++Q L +  P          R   +  +       G ++        
Sbjct: 108 GLSNLGNTCFLNSSVQCLSNTIPLTDYFLGYDYRS--EINHDNFLGSKGALA-------- 157

Query: 263 SSKKKNISVLDIGR---PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
           SS  + +  L +G+    +SP  F++ L  F P    S     +Q DAQE L++++D MH
Sbjct: 158 SSYAEVVKHLWLGQGAQHYSPGRFKSSLAKFAPQFDGS-----QQHDAQELLAYLLDGMH 212

Query: 320 DELLKLQG----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
           ++L +++     E    +G+N  + ++A    W     +++S V            D+F 
Sbjct: 213 EDLNRVKSKPYIEDDDCDGSNDDVDAIA---AWSNYLRRDQSIVV-----------DLFQ 258

Query: 376 GQLKSVVKAQ-GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 434
           GQL+S +      K S     F+ L L + ++   T++D L LF   E L G        
Sbjct: 259 GQLRSRMTCSVCGKVSVKFDSFMYLSLPVTADC-RTLDDCLGLFCEEEYLSGDDAWYCPR 317

Query: 435 AGV-VTAKKSVKIQTLSKILILHLMRFSYGSQG-STKLHKSVRFPL 478
               V A K + +  L  ILI+HL RF +   G  +K+ + + +PL
Sbjct: 318 CKCHVDAAKKMDLFMLPPILIVHLKRFEFSESGRRSKIERDISYPL 363


>gi|119573028|gb|EAW52643.1| ubiquitin specific peptidase 21, isoform CRA_b [Homo sapiens]
          Length = 551

 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 132/303 (43%), Gaps = 47/303 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313

Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
           H E+ + +G       AN  + S       L EE E       N   K  + R      S
Sbjct: 314 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 368

Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
            + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E 
Sbjct: 369 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 428

Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 480
           LE             T + K + +Q   +IL L L RFS  S+GS K     V FPLQ L
Sbjct: 429 LESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFS-ASRGSIKKSSVGVDFPLQRL 487

Query: 481 VLG 483
            LG
Sbjct: 488 SLG 490


>gi|397481302|ref|XP_003811887.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Pan paniscus]
          Length = 594

 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 132/303 (43%), Gaps = 47/303 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 242 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 300

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 301 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 342

Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
           H E+ + +G       AN  + S       L EE E       N   K  + R      S
Sbjct: 343 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 397

Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
            + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E 
Sbjct: 398 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 457

Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 480
           LE             T + K + +Q   +IL L L RFS  S+GS K     V FPLQ L
Sbjct: 458 LESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFS-ASRGSIKKSSVGVDFPLQRL 516

Query: 481 VLG 483
            LG
Sbjct: 517 SLG 519


>gi|395729514|ref|XP_002809941.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Pongo abelii]
          Length = 594

 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 132/303 (43%), Gaps = 47/303 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 242 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 300

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 301 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 342

Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
           H E+ + +G       AN  + S       L EE E       N   K  + R      S
Sbjct: 343 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 397

Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
            + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E 
Sbjct: 398 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 457

Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 480
           LE             T + K + +Q   +IL L L RFS  S+GS K     V FPLQ L
Sbjct: 458 LESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFS-ASRGSIKKSSVGVDFPLQRL 516

Query: 481 VLG 483
            LG
Sbjct: 517 SLG 519


>gi|366987127|ref|XP_003673330.1| hypothetical protein NCAS_0A03840 [Naumovozyma castellii CBS 4309]
 gi|342299193|emb|CCC66942.1| hypothetical protein NCAS_0A03840 [Naumovozyma castellii CBS 4309]
          Length = 917

 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 54/210 (25%)

Query: 303 RQEDAQEFLSFIMDQMHDELL---------KLQGESTSINGANTALVSL----------- 342
           RQEDA+EFL+ ++DQ+H+EL+         ++Q    SIN  +  +  +           
Sbjct: 591 RQEDAEEFLTHLLDQLHEELVSSIDCLTDNEIQNLLQSINDESLKIFIVRNLPRYKKADF 650

Query: 343 ----------------------AEEDEWETVGPKNK------SAVTRTQSFLPSALSDIF 374
                                 + ++EW  V   +K      +A  RT   +PS +S++F
Sbjct: 651 ITNISPKLKELINKYGAANDDTSSDNEWFEVSGSSKKGKKNKTAAKRTVEVIPSPISNLF 710

Query: 375 GGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSST 432
           GGQ +SV+    NK S   T+ PF  + LDI    V+ +E A + FS  E L  +RTS  
Sbjct: 711 GGQFRSVLDIPNNKESQSITLDPFQTIQLDISDPKVNDLESAFKQFSEYE-LLPFRTS-- 767

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSY 462
            N   V AKK   I  L ++L++ L RF++
Sbjct: 768 -NGTDVEAKKQTFIDKLPRVLLIQLKRFAF 796



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 17/43 (39%), Positives = 32/43 (74%)

Query: 196 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDI 238
           +K ++PRG++N  N+CF+++ LQ L+ C PF+ +L  + TR++
Sbjct: 424 IKSIIPRGIVNMANICFMSSVLQVLLYCKPFIDILNVISTRNM 466


>gi|189521699|ref|XP_688359.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform 2
           [Danio rerio]
          Length = 383

 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 123/284 (43%), Gaps = 28/284 (9%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +  P+     LT         D  +  
Sbjct: 40  GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKIQ--PRRKESLLTCLA------DLFNSI 91

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D L
Sbjct: 92  ATQKKKVGVI------PPKKFISRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADLL 140

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
            + + +    NG                          +TQ    + + +IF G L +  
Sbjct: 141 QEEKSQERQQNGKVVQNGGSGSGGGGSGSSTGEGETEEKTQQ---TWVHEIFQGTLTNET 197

Query: 383 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +    +A S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 198 RCLNCEAVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEA 255

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
           +K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 256 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 299


>gi|443688793|gb|ELT91385.1| hypothetical protein CAPTEDRAFT_151271 [Capitella teleta]
          Length = 412

 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 130/289 (44%), Gaps = 42/289 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFV--GFVSDFDTPS 260
           GL N GN CF+N+ +Q L +     +LL++   RD  K      T+ +    ++ F    
Sbjct: 72  GLRNLGNTCFMNSVIQCLSN----TRLLRDYCRRDEHKDEVNKTTSNMKGALINAFANLM 127

Query: 261 GGSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
               K         G P    SP+ F++ +  F             Q+DAQEFL ++++ 
Sbjct: 128 HSIWK---------GAPDTHVSPNDFKSQIARFAKRFVGY-----NQQDAQEFLMYLLEG 173

Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
           +H+++ +++ +  +          + +ED+ +TV  +    +   Q+   S + DIF GQ
Sbjct: 174 LHEDVNRVKEKRKN---------RIYDEDDSKTVSAQEMWKMYLHQN--DSKIVDIFVGQ 222

Query: 378 LKSVVKAQG-NKASATVQPFLLLHLDI-----YSEAVHTIEDALRLFSAPENLEG-YRTS 430
           LKS +   G    S T  PF  L L I     Y   V ++E    LF++ E L+G  +  
Sbjct: 223 LKSSLTCTGCGHVSDTFDPFWDLSLPIKKGHGYGNDV-SLESCFELFTSEEVLDGDEKPM 281

Query: 431 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
            +         KS  IQ   K+LI+HL RF+  S   +KL   V FPLQ
Sbjct: 282 CSKCKKRQKCTKSFSIQRFPKVLIIHLKRFNQDSSYRSKLSTMVNFPLQ 330


>gi|388581444|gb|EIM21752.1| cysteine proteinase, partial [Wallemia sebi CBS 633.66]
          Length = 454

 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 126/288 (43%), Gaps = 37/288 (12%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL N GN C++N+TLQ L +  PF +       R      +       G +++  +    
Sbjct: 140 GLKNLGNTCYMNSTLQCLSATIPFARFFTSGVWRRF--VNHNNKMGMQGRLAESFSQILT 197

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
              ++  + +      SP  F   +  F     N   G   Q DAQEFLSF++D +H++L
Sbjct: 198 HMWREQYTFI------SPMTFRKNICTFA----NQFIGT-DQHDAQEFLSFLLDGLHEDL 246

Query: 323 LKLQGESTSINGANTALVS----LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           +  +G+  + +  N AL S    L  E EW+     N S +            D F GQ 
Sbjct: 247 MVGEGQKPTEDTNNDALESLPTPLGSEREWKRYKQMNDSVIV-----------DYFQGQF 295

Query: 379 KSVVKAQG-NKASATVQPFLLLHLDIYSEAVH---TIEDALRLFSAPENLEGYRTSSTGN 434
           ++ ++    +K S T   F+ L L + ++ +    ++   L  F   E +E     +  N
Sbjct: 296 RNRMECMSCHKTSTTYNSFMYLSLPVPTKKLKGSVSLTTCLDSFLKDEVMEKDNAWNCPN 355

Query: 435 AGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
             V  A+KS+K   I  L  IL++ L RFS+    S K+   V +PL+
Sbjct: 356 CKV--ARKSIKRLSIARLPPILLIQLKRFSFNGPFSDKIETLVTYPLK 401


>gi|119573030|gb|EAW52645.1| ubiquitin specific peptidase 21, isoform CRA_d [Homo sapiens]
          Length = 565

 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 132/303 (43%), Gaps = 47/303 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313

Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
           H E+ + +G       AN  + S       L EE E       N   K  + R      S
Sbjct: 314 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 368

Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
            + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E 
Sbjct: 369 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 428

Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 480
           LE             T + K + +Q   +IL L L RFS  S+GS K     V FPLQ L
Sbjct: 429 LESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFS-ASRGSIKKSSVGVDFPLQRL 487

Query: 481 VLG 483
            LG
Sbjct: 488 SLG 490


>gi|109017739|ref|XP_001117768.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 3
           [Macaca mulatta]
 gi|410034003|ref|XP_524939.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 9 [Pan
           troglodytes]
 gi|426332415|ref|XP_004027801.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Gorilla
           gorilla gorilla]
          Length = 565

 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 132/303 (43%), Gaps = 47/303 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313

Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
           H E+ + +G       AN  + S       L EE E       N   K  + R      S
Sbjct: 314 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 368

Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
            + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E 
Sbjct: 369 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 428

Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 480
           LE             T + K + +Q   +IL L L RFS  S+GS K     V FPLQ L
Sbjct: 429 LESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFS-ASRGSIKKSSVGVDFPLQRL 487

Query: 481 VLG 483
            LG
Sbjct: 488 SLG 490


>gi|395822291|ref|XP_003784454.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
           [Otolemur garnettii]
          Length = 520

 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 140/322 (43%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 152 STAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H EL          NG + +  ++ +E+   T+   NK  +  +
Sbjct: 257 QQQDAHEFMRYLLDHLHLEL------QDGFNGVSHS--AILQEN--STLSTSNKCCINGS 306

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 307 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEP 444


>gi|348532572|ref|XP_003453780.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
           [Oreochromis niloticus]
          Length = 403

 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 132/310 (42%), Gaps = 46/310 (14%)

Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLT----AF 249
           KS++ L+  GL N GN CF+N+ LQ L +         ELR   +       L     + 
Sbjct: 53  KSLQGLV--GLRNLGNTCFMNSILQCLSN-------TLELRDYCLRNCHITDLNNNCRSN 103

Query: 250 VGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQE 309
              + +F   +       N        P SPS F   ++   P           Q+DAQE
Sbjct: 104 TALIEEFAKLTQSLWTSAN------NEPISPSEFRNQVQRCAPKFVGC-----NQQDAQE 152

Query: 310 FLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDE----WETVGPKNKSAVTRTQSF 365
           FL F++D +H+E+ ++   +     +      LA++++    W     +  S V      
Sbjct: 153 FLRFLLDGLHNEVNRV---TVRPKVSVLDFDHLADDEKGRRMWNMYLAREDSKVV----- 204

Query: 366 LPSALSDIFGGQLKSVVKAQGNKASATV-QPFLLLHLDIYSEAVH--TIEDALRLFSAPE 422
                 D+F GQLKS +        +TV  PF  L + I  +     T++D LRLF+  +
Sbjct: 205 ------DLFVGQLKSSLTCTACGFRSTVFDPFWDLSIPIAQKISGEVTLKDCLRLFTKED 258

Query: 423 NLEGY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLV 481
            L+G  R + T         K   IQ   +IL+LHL RFS  +  ++KL   V FPL+ +
Sbjct: 259 VLDGEERPTCTKCKARRKCTKRFSIQKFPQILVLHLKRFSDSNVRASKLSTYVNFPLKDL 318

Query: 482 LGRDLLVTPS 491
             R+    PS
Sbjct: 319 DLREFASEPS 328


>gi|384495371|gb|EIE85862.1| hypothetical protein RO3G_10572 [Rhizopus delemar RA 99-880]
          Length = 493

 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 117/282 (41%), Gaps = 53/282 (18%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL+N+ N CFLNA L  L   +P  Q LL +   ++    G+  L A    V+   T + 
Sbjct: 78  GLVNAFNTCFLNAVLCCLTYTAPLTQYLLTDNHKKNCTIHGFCGLCAMSEHVNKCFTTAK 137

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
              +   IS         P+ F + LK  +    N + GR  QEDA EF  F++D     
Sbjct: 138 SLMRFSAIS---------PNYFTSNLKKISS---NLLLGR--QEDAHEFFMFLLDAFTKS 183

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
              L  + T             EED                       +  IFGG+L+S 
Sbjct: 184 YTPLNSKLTP-----------QEEDA--------------------GLVHTIFGGKLQSQ 212

Query: 382 VKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTA 440
           V     KA S +   FL L + I  E   +I++AL  F   + ++GY   +      V A
Sbjct: 213 VTCNNCKANSNSYDRFLDLSVQINGEK--SIQNALSRFIEADTIDGYNCDACKQK--VRA 268

Query: 441 KKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQL 480
            K +    +   L++HL RF Y   S G  K+HKSV+FP  L
Sbjct: 269 YKQMTANEVPHNLVIHLKRFEYDMYSNGMRKIHKSVKFPETL 310


>gi|442753601|gb|JAA68960.1| Putative ubiquitin-specific protease [Ixodes ricinus]
          Length = 400

 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 135/306 (44%), Gaps = 46/306 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + + E + R+  +     LT            S  
Sbjct: 25  GLVNFGNTCYCNSVLQALYFCKPFREKVLEYKARN-KRTKETLLTCLADLFH-----SIA 78

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           + KKK  ++       +P  F A L+       N +     Q+DA EFL+++++ + D L
Sbjct: 79  NQKKKTGTI-------APKKFIARLRK-----ENDLFDNYMQQDAHEFLNYLLNTIADIL 126

Query: 323 L---KLQGESTSINGANTALVSLAEED--------EWETVGPKNKSAV-----TRTQSF- 365
               + QG+S +     ++  S +++            T+G  N++       T+ QS  
Sbjct: 127 QAEKQTQGQSNAKGNKCSSATSASDQQGSHTPQQQTTTTLGAPNQATATAAAGTQPQSNP 186

Query: 366 -----LPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
                 P+ + DIF G L +  +       S+  + FL L +D+      +I   LR FS
Sbjct: 187 QPHKPEPTWVHDIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVSQNT--SITHCLRGFS 244

Query: 420 APENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRF 476
             E L   ++           A+K ++++ L  IL LHL RF Y  Q +  TKL   V F
Sbjct: 245 NTETLCSEHKYYCENCCSKQEAQKRMRVKKLPMILALHLKRFKYTEQQNRHTKLSYRVVF 304

Query: 477 PLQLVL 482
           PL+L L
Sbjct: 305 PLELRL 310


>gi|403298210|ref|XP_003939924.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Saimiri
           boliviensis boliviensis]
          Length = 498

 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 141/322 (43%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 130 STAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 183

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 184 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 234

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+    +   NK  +   
Sbjct: 235 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--TILQEN--SALSASNKCCINGA 284

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 285 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 340

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 341 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 400

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 401 KVDTYVEFPLRGLDMKCYLLEP 422


>gi|395822293|ref|XP_003784455.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2
           [Otolemur garnettii]
          Length = 476

 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 140/322 (43%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 108 STAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 161

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 162 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 212

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H EL          NG + +  ++ +E+   T+   NK  +  +
Sbjct: 213 QQQDAHEFMRYLLDHLHLEL------QDGFNGVSHS--AILQEN--STLSTSNKCCINGS 262

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 263 S----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 318

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 319 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 378

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 379 KVDTYVEFPLRGLDMKCYLLEP 400


>gi|363737872|ref|XP_413755.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Gallus gallus]
          Length = 520

 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 141/322 (43%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   L   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 152 STTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRT------ 205

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +++ L E     ++   +K  +   
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSVI-LQENS---SLTASSKCCINGA 306

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             + 
Sbjct: 307 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRTKNQENGPMC 362

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           T+ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 363 TLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEP 444


>gi|298706128|emb|CBJ29221.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 772

 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 101/249 (40%), Gaps = 46/249 (18%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQE----LRTRDIPKAGYPTLTAFVGFVS 254
           L+ RGLIN+GN CF NA LQAL++C PFVQ+L      LR     +   PT      F +
Sbjct: 281 LVHRGLINTGNSCFRNAVLQALLACEPFVQVLFRAAPGLRDSVPAREALPTWAQLARFAA 340

Query: 255 DFDTP---------SGGSSKKK---NISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRP 302
            F+ P         SGGSS  K   + +              A      P +P+    R 
Sbjct: 341 AFEPPKPGAAAPLASGGSSSAKGAWSTAGGRNRGGGGGRYHRASSAAAEPVLPDEAMSRA 400

Query: 303 ----------RQEDAQEFLSFIMDQMHDELLK----------------LQGESTSINGAN 336
                      QEDAQEFL+F +DQ+H+E++                 +  +S +  G  
Sbjct: 401 FGAFRAASLGEQEDAQEFLAFFLDQLHEEIVDAKKNNPKPASDGGSGGVSADSRTGGGGG 460

Query: 337 TALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPF 396
                  E+D W  VG     AV          ++ +F    +S VK  GN  S+     
Sbjct: 461 QQQGEGEEDDAWLEVGKGGAKAVVNAPDPR-KKVTGLFYRMFRSEVKKNGNPQSSVT--- 516

Query: 397 LLLHLDIYS 405
           L L LD+ S
Sbjct: 517 LELDLDLPS 525


>gi|395502639|ref|XP_003755686.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Sarcophilus
           harrisii]
          Length = 711

 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 137/319 (42%), Gaps = 49/319 (15%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVS 254
           S   L   GL N GN CF+NA LQ+L +   F    +EL          P +    G  +
Sbjct: 343 STTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKEL----------PAVELRNGKTA 392

Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRPRQE 305
              T    S    N+S+++  R    ++++     F+P+         +PN   G  +Q+
Sbjct: 393 GRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY-QQQ 450

Query: 306 DAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSF 365
           DA EF+ +++D +H   L+LQG     NG + +++ L E     ++   NK  +      
Sbjct: 451 DAHEFMRYLLDHLH---LELQG---GFNGVSRSVI-LQENS---SLSASNKCCINGAS-- 498

Query: 366 LPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIE 412
             + ++ IFGG L++ V        S    PFL L LDI S+             + ++ 
Sbjct: 499 --TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPLCSLR 556

Query: 413 DALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLH 471
           D LR F+  E L E              + K   IQ L K+L LHL RF + +    K+ 
Sbjct: 557 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 616

Query: 472 KSVRFPLQLVLGRDLLVTP 490
             V FPL+ +  +  L+ P
Sbjct: 617 TYVEFPLRGLDMKCYLLEP 635


>gi|255545936|ref|XP_002514028.1| conserved hypothetical protein [Ricinus communis]
 gi|223547114|gb|EEF48611.1| conserved hypothetical protein [Ricinus communis]
          Length = 1060

 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 122/289 (42%), Gaps = 55/289 (19%)

Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDF 256
           ++ P GLIN GN C+ NA LQ L    P     +Q L +++     +        F  +F
Sbjct: 519 EMRPCGLINCGNSCYANAVLQCLAFTPPLTAYFVQGLHSKECVNKEW-------CFTCEF 571

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
           ++    + + K+        P SP    + L+N    +     G  R+EDA EFL + +D
Sbjct: 572 ESLMLKAKEGKS--------PLSPIGILSQLQNIASQL-----GTGREEDAHEFLRYAID 618

Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
            M    LK  G    +N    AL S  EE                      + +   FGG
Sbjct: 619 TMQSVCLKEAG----VN----ALGSFEEE---------------------TTLIGLTFGG 649

Query: 377 QLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 435
            L+S +K  + +  S   +  + L ++I  + +  +EDALR F+  E L+G      G  
Sbjct: 650 YLRSKIKCMKCHYKSERHERMMDLTVEIEGD-IEKLEDALRRFTGTEILDGDNKYQCGRC 708

Query: 436 -GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLG 483
                AKK + I     +L + L RF  G  G  KL+KS+RFP  L L 
Sbjct: 709 KSYEKAKKKLTILEAPNVLTIALKRFQSGKFG--KLNKSIRFPEILDLA 755


>gi|355727980|gb|AES09374.1| ubiquitin specific peptidase 3 [Mustela putorius furo]
          Length = 472

 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 141/322 (43%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 104 STAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 157

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 158 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 208

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+    +   NK  +   
Sbjct: 209 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--SALSASNKCCINGA 258

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 259 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 314

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 315 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 374

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 375 KVDTYVEFPLRGLDMKCYLLEP 396


>gi|198435016|ref|XP_002126339.1| PREDICTED: similar to ubiquitin specific peptidase 8 [Ciona
            intestinalis]
          Length = 1094

 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 130/284 (45%), Gaps = 38/284 (13%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ + + +   + +L +  T+D+ +A        +G          
Sbjct: 760  GLRNLGNSCYMNSVLQCMFNMTQLAEYILTDSYTKDLNRANK------IGH--------- 804

Query: 262  GSSKKKNISVLDIGRPFSPSMFEAVL----KNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
            G    ++ SVL   R    S +E ++    K+    + +S +G   QED+QEFL  ++D 
Sbjct: 805  GGRVAESFSVL--LRAVWSSKYEYIVPSDFKSIIGTINSSFAGY-TQEDSQEFLMLLLDG 861

Query: 318  MHDELLKLQGESTSINGANTALV-SLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
            +H++L K           N AL    A +  W+    +N+S +            ++  G
Sbjct: 862  LHEDLNKAPQSEYKEEPDNDALDDEEAAQMAWKYHKKRNESIIV-----------ELLKG 910

Query: 377  QLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 435
            Q K+ VK     KAS    PF+ L L + +++  +I D L+ F   E + G       N 
Sbjct: 911  QFKATVKCLHCGKASRKFDPFMYLSLPLPNKSA-SIYDILKSFQRVEQMTGSDRWHCPNC 969

Query: 436  GVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
              +  A +S++I  L  +LI+H  RF +  +   K+H ++ +P+
Sbjct: 970  KTLRDAVRSIEIWKLPPVLIIHFKRFVHTGRWRDKIHTNISYPM 1013


>gi|291402890|ref|XP_002718220.1| PREDICTED: ubiquitin thiolesterase 3 [Oryctolagus cuniculus]
          Length = 520

 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 133/322 (41%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 152 STAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205

Query: 252 FVSDFDTPSGGSSK-------KKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRP 302
               + T S G +        +K +  L  G    FSP     V+    P+         
Sbjct: 206 ----YHTRSQGDTSVSLVEEFRKTLCALWQGSQTAFSPESLFYVIWKIMPNFRGY----- 256

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + + V L E     T+   +K  V   
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAV-LQENS---TLSASSKCCVNGA 306

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 307 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEP 444


>gi|195399524|ref|XP_002058369.1| GJ14347 [Drosophila virilis]
 gi|194141929|gb|EDW58337.1| GJ14347 [Drosophila virilis]
          Length = 363

 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 131/297 (44%), Gaps = 47/297 (15%)

Query: 198 DLLP-----RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFVG 251
           DL P      GL+N GN C+ N+ LQAL  C PF + + E + ++  PK    +  A + 
Sbjct: 15  DLFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKRPKETLLSCLADLF 74

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 311
           +       S  + KKK  S+       +P  F   L+    +  N +     Q+DA EFL
Sbjct: 75  Y-------SIATQKKKVGSI-------APKKFITRLRKEKEEFDNYM-----QQDAHEFL 115

Query: 312 SFIMDQMHDELL--KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 369
           +F+++ +++ +L  +  G ST    A  A+            GP  ++    T+   P+ 
Sbjct: 116 NFLINHINEIILAERNTGSSTGKTAAGGAI-----------PGPNAQTNGANTE---PTW 161

Query: 370 LSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYR 428
           + +IF G L S  +       S+  + F  L +D+      +I   LR FS  E L    
Sbjct: 162 VHEIFQGILTSETRCLNCETVSSKDENFFDLQVDVDQNT--SITHCLRCFSNTETLCSDN 219

Query: 429 TSSTGN-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL 482
                N      A+K ++++ L  IL LHL RF Y  Q +   K+   V FPL+L L
Sbjct: 220 KFKCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPLELRL 276


>gi|345316872|ref|XP_003429803.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Ornithorhynchus
           anatinus]
          Length = 494

 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 140/322 (43%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   L   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 126 STTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRT------ 179

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 180 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 230

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +++ L E      +   NK  +   
Sbjct: 231 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSVI-LQENS---GLSASNKCCINGA 280

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             + 
Sbjct: 281 S----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPMC 336

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 337 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 396

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 397 KVDTYVEFPLRGLDMKCYLLEP 418


>gi|413943501|gb|AFW76150.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
           [Zea mays]
          Length = 944

 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 125/306 (40%), Gaps = 52/306 (16%)

Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDF 256
           D++P GL+N GN CF N  LQ L    P V  LL +  +R+     +             
Sbjct: 188 DVVPCGLMNCGNSCFANVVLQCLSCTRPLVAYLLGKDHSREC-SVRHEDWCFLCELQCHI 246

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
              SG               PF+P+   + L N   ++     G  RQEDA EF+ F +D
Sbjct: 247 QRASGSL------------HPFAPTNILSHLPNIGGNL-----GVGRQEDAHEFMRFAID 289

Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
           +M    L   G   +++      +S+ E                       + +  IFGG
Sbjct: 290 KMQSACLDEYGGEKAVD------LSIQET----------------------TIIQHIFGG 321

Query: 377 QLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRTSSTGN 434
           +L+S V+       S      + L ++I  +A  ++E  L  F+A E L+G  +    G 
Sbjct: 322 RLQSQVQCTTCGMVSNRYDNMMDLTVEIQGDA-ESLERCLDQFTAVEWLDGDNKYKCDGC 380

Query: 435 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEV 494
              V A+K + +Q    IL + L RF  G  G  KL+K V FP++L L   +  T  +++
Sbjct: 381 NDYVKARKHLSVQQAPNILTITLKRFQTGRFG--KLNKRVTFPMELDLTPYMSCTDGSDL 438

Query: 495 LQFLNV 500
                V
Sbjct: 439 YDLYAV 444


>gi|109462598|ref|XP_001074163.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase DUB-1-like [Rattus
           norvegicus]
          Length = 504

 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 125/304 (41%), Gaps = 74/304 (24%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYP---TLTAFVGFVSD--FD 257
           GL N GN C+LNA LQ L    P    +  L      +  YP    + A    V+     
Sbjct: 52  GLQNIGNSCYLNAVLQCLTHTPPLADYM--LSQEHSQRCCYPEGCNMCAMEAHVTQSLLH 109

Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
           + SGG  K              PS           ++  S   + RQEDA EFL F ++ 
Sbjct: 110 SHSGGVMK--------------PS-----------EILTSTFHKHRQEDAHEFLMFTLNT 144

Query: 318 MHDELLK--LQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
           MH+  L+   Q E+TS +                                  S + DIFG
Sbjct: 145 MHESCLRGCKQSETTSKDS---------------------------------SLIYDIFG 171

Query: 376 GQLKSVVKAQGNKASA-TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 434
           GQ++S +K    + +  +  PFL L LDI S    +++ AL      E L+G      G 
Sbjct: 172 GQMRSQIKCHHCQGTLDSYDPFLNLFLDICS--AQSVKQALEDLVKVEELQGDNAYYCGR 229

Query: 435 AG-VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 493
               + A K+ K+QT SK+L+L L R SY   G  KL++ V +P  L L +  L  P+A 
Sbjct: 230 CREKMPASKTTKVQTASKVLLLVLNR-SYDF-GGDKLNRVVSYPEYLDL-QPYLSQPTAG 286

Query: 494 VLQF 497
            L +
Sbjct: 287 PLPY 290


>gi|224142061|ref|XP_002324377.1| predicted protein [Populus trichocarpa]
 gi|222865811|gb|EEF02942.1| predicted protein [Populus trichocarpa]
          Length = 489

 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 118/286 (41%), Gaps = 56/286 (19%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAF--VGFVSDFDT 258
           P GL+N GN CF N  LQ L    P V  L E         G+ T        F+ +F +
Sbjct: 180 PCGLLNCGNSCFANVVLQCLTYTRPLVAYLLE--------KGHQTECKHNDWCFLCEFQS 231

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
               +S+           PFSP    + L+N   ++     G  RQEDA EF+ F +D M
Sbjct: 232 HVERASQS--------ALPFSPMNILSRLRNIGGNL-----GYGRQEDAHEFMRFAIDTM 278

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
                                V L E    + V P ++           + +  IFGG+L
Sbjct: 279 QS-------------------VCLDEFGGEKAVEPASQET---------TIIQHIFGGRL 310

Query: 379 KS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSST-GNAG 436
           +S V+  + NK S   +  + L ++I+ +A  ++E+ L  F+  E L G       G   
Sbjct: 311 QSQVICTKCNKISNQFENMMDLTVEIHGDA-ESLEECLNQFTDKEWLHGENMYKCDGCND 369

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 482
            V A K + IQ    +L + L RF  G  G  KL+K V FP  L L
Sbjct: 370 YVKAWKRLTIQRAPNVLTIALKRFQSGRFG--KLNKRVTFPETLDL 413


>gi|390476931|ref|XP_002760234.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 2
           [Callithrix jacchus]
          Length = 565

 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 131/302 (43%), Gaps = 45/302 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313

Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
           H E+ +    +  I  +  A        +L EE +       N   K  + R      S 
Sbjct: 314 HLEINRRGRRAPPILASGPAPSPPCRGGALLEEPDLSDDDRANLMWKRYLERED----SK 369

Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
           + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEEL 429

Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 481
           E             T + K + +Q   +IL L L RFS  S+GS K     V FPLQ L 
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFS-ASRGSIKKSSVGVDFPLQRLS 488

Query: 482 LG 483
           LG
Sbjct: 489 LG 490


>gi|109459181|ref|XP_219062.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase DUB-1-like [Rattus
           norvegicus]
          Length = 504

 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 125/304 (41%), Gaps = 74/304 (24%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYP---TLTAFVGFVSD--FD 257
           GL N GN C+LNA LQ L    P    +  L      +  YP    + A    V+     
Sbjct: 52  GLQNIGNSCYLNAVLQCLTHTPPLADYM--LSQEHSQRCCYPEGCNMCAMEAHVTQSLLH 109

Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
           + SGG  K              PS           ++  S   + RQEDA EFL F ++ 
Sbjct: 110 SHSGGVMK--------------PS-----------EILTSTFHKHRQEDAHEFLMFTLNT 144

Query: 318 MHDELLK--LQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
           MH+  L+   Q E+TS +                                  S + DIFG
Sbjct: 145 MHESCLRGCKQSETTSKDS---------------------------------SLIYDIFG 171

Query: 376 GQLKSVVKAQGNKASA-TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 434
           GQ++S +K    + +  +  PFL L LDI S    +++ AL      E L+G      G 
Sbjct: 172 GQMRSQIKCHHCQGTLDSYDPFLNLFLDICS--AQSVKQALEDLVKVEELQGDNAYYCGR 229

Query: 435 AG-VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 493
               + A K+ K+QT SK+L+L L R SY   G  KL++ V +P  L L +  L  P+A 
Sbjct: 230 CREKMPASKTTKVQTASKVLLLVLNR-SYDF-GGDKLNRVVSYPEYLDL-QPYLSQPTAG 286

Query: 494 VLQF 497
            L +
Sbjct: 287 PLPY 290


>gi|427783739|gb|JAA57321.1| Putative ubiquitin-specific protease [Rhipicephalus pulchellus]
          Length = 387

 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 125/299 (41%), Gaps = 39/299 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + + E + R+  +     LT            S  
Sbjct: 25  GLVNFGNTCYCNSVLQALYFCKPFREKVLEYKARN-KRTKETLLTCLADLFH-----SIA 78

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           + KKK  ++       +P  F A L+       N +     Q+DA EFL+++++ + D L
Sbjct: 79  NQKKKTGTI-------APKKFIARLRK-----ENELFDNYMQQDAHEFLNYLLNTIADIL 126

Query: 323 L--KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL-------------P 367
              K Q +  S   A     S + +      G    SA    Q                P
Sbjct: 127 QAEKQQQQQNSQTNAKGNKCSSSGDTAHNAAGGPMASAGATAQCMQNQVGGTAQPPKPEP 186

Query: 368 SALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-E 425
           + + DIF G L +  +       S+  + FL L +D+      +I   LR FS  E L  
Sbjct: 187 TWVHDIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVSQNT--SITHCLRGFSNTETLCS 244

Query: 426 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL 482
            ++           A+K ++++ L  IL LHL RF Y  Q +  TKL   V FPL+L L
Sbjct: 245 EHKYYCENCCSKQEAQKRMRVKKLPMILALHLKRFKYTEQQNRHTKLSYRVVFPLELRL 303


>gi|167534112|ref|XP_001748734.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772696|gb|EDQ86344.1| predicted protein [Monosiga brevicollis MX1]
          Length = 356

 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 101/202 (50%), Gaps = 26/202 (12%)

Query: 304 QEDAQEFLSFIMDQMHDEL---------LKLQGESTSINGANTALVSLAEEDEWETVGPK 354
           Q+DA+E LSF++D++H E+         L  +G+ ++  G + A      E  W     K
Sbjct: 92  QQDAEELLSFLLDKLHLEVAAYLEKHPELMEEGDLSAGAGNDDA------EGGWHEASSK 145

Query: 355 ----NKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHT 410
               + + V      + + +S  F  +++S +  +G + S T+QP+  L LDI  E V +
Sbjct: 146 GVGVSVNTVETHDRQVETPISSAFTVRMRSTLDMKGQRRSVTIQPYHCLPLDIEPEHVRS 205

Query: 411 IEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKL 470
           + DA+R     E L      ++    V+   K + ++TL  IL+L L RFSYG  G  KL
Sbjct: 206 LHDAMR-----ETLRNEPLYASSQDEVI-GHKQLLLETLPPILLLSLKRFSYGPYGPIKL 259

Query: 471 HKSVRFPLQLVLGRDLLVTPSA 492
            K V+F  +L +  + + +P+A
Sbjct: 260 QKHVKFEAELCIDPEFM-SPTA 280


>gi|410961062|ref|XP_003987104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Felis catus]
          Length = 503

 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 141/322 (43%), Gaps = 55/322 (17%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 251
           S   +   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T      
Sbjct: 135 STTGICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 188

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 302
               + T S G +   N+S+++  R    ++++     F+P+         +PN   G  
Sbjct: 189 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 239

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           +Q+DA EF+ +++D +H   L+LQG     NG + +  ++ +E+    +   NK  +   
Sbjct: 240 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQEN--SALSGSNKCCINGA 289

Query: 363 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 409
                + ++ IFGG L++ V        S    PFL L LDI S+             V 
Sbjct: 290 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 345

Query: 410 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 468
           ++ D LR F+  E L E              + K   IQ L K+L LHL RF + +    
Sbjct: 346 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 405

Query: 469 KLHKSVRFPLQLVLGRDLLVTP 490
           K+   V FPL+ +  +  L+ P
Sbjct: 406 KVDTYVEFPLRGLDMKCYLLEP 427


>gi|351710726|gb|EHB13645.1| Ubiquitin carboxyl-terminal hydrolase 21 [Heterocephalus glaber]
          Length = 565

 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 128/302 (42%), Gaps = 45/302 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313

Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
           H E+ + +G       AN  + S       L EE +       N   K  + R      S
Sbjct: 314 HLEINR-RGRRAPPILANAPVPSPPRRGGALLEEPDLSDDDRANVMWKRYLERED----S 368

Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
            + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E 
Sbjct: 369 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEE 428

Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LV 481
           LE             T + K + +Q   +IL L L RFS       K    V FPLQ L 
Sbjct: 429 LESENAPVCDRCRQKTRSTKKLTVQRFPRILDLDLNRFSTSRGSIKKSSVGVDFPLQRLS 488

Query: 482 LG 483
           LG
Sbjct: 489 LG 490


>gi|357614773|gb|EHJ69266.1| hypothetical protein KGM_20368 [Danaus plexippus]
          Length = 377

 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 125/284 (44%), Gaps = 36/284 (12%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF   + E + ++  +     LT            S  
Sbjct: 39  GLVNFGNTCYSNSVLQALYFCRPFRDRVLEYKAKN-KRTKETLLTCLADLFY-----SIA 92

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           + KKK  S+       +P  F A L+    +  N +     Q+DA EFL+F+++ +++ +
Sbjct: 93  TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 140

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L  + +ST         + L + D  +     N S    T+   P+ + +IF G L S  
Sbjct: 141 LAERNQST---------LKLQKTDGVKENVTCNGSIPQNTE---PTWVHEIFQGTLTSET 188

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT-A 440
           +       S+  + F  L +D+      +I   L+ FS  E L         N      A
Sbjct: 189 RCLNCETVSSKDEHFFDLQVDVDQNT--SITHCLKCFSDTETLCNDNKFKCDNCSSYQEA 246

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL 482
           +K ++++ L  IL LHL RF Y  Q +   K+   V FPL+L L
Sbjct: 247 QKRMRVKKLPLILALHLKRFKYMEQYNRHIKVSHRVVFPLELRL 290


>gi|167518329|ref|XP_001743505.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778604|gb|EDQ92219.1| predicted protein [Monosiga brevicollis MX1]
          Length = 328

 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 97/219 (44%), Gaps = 20/219 (9%)

Query: 276 RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGA 335
           R  +P  F+A L +F P    +     +Q+DAQEF SF +D +H++L +++ +    N  
Sbjct: 56  RYLAPKFFKATLASFAPQFEGT-----QQQDAQEFASFFLDGLHEDLNRVRKKVCDCN-L 109

Query: 336 NTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQ 394
           +     LA +  W     ++ S +            D+F GQ +S ++       S    
Sbjct: 110 DGMPDHLAADKAWNEYLTRHNSIIV-----------DLFQGQYRSAMRCLTCGHESLNFS 158

Query: 395 PFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILI 454
           PF+ L L I +     I   L+ F   E + G+R      A    A K++ I  L  +L+
Sbjct: 159 PFMFLTLPIPANPSVDIRACLQEFVRAERVNGWRCPKCKCAR--DASKTLSIWRLPPLLM 216

Query: 455 LHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 493
           +HL RF++      KL   V FPL  +  +D +  P  +
Sbjct: 217 IHLKRFTFSGPFRDKLSTRVDFPLTNLKIQDGVANPKLQ 255


>gi|403294063|ref|XP_003938024.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Saimiri
           boliviensis boliviensis]
          Length = 596

 Score = 78.2 bits (191), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 131/302 (43%), Gaps = 45/302 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 244 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 302

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 303 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 344

Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
           H E+ +    +  I  +  A        +L EE +       N   K  + R      S 
Sbjct: 345 HLEINRRGRRAPPILASGPAPSPPRRGGALLEEPDLSDDDRANLMWKRYLERED----SK 400

Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
           + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E L
Sbjct: 401 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEEL 460

Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 481
           E             T + K + +Q   +IL L L RFS  S+GS K     V FPLQ L 
Sbjct: 461 ESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFS-ASRGSIKKSSVGVDFPLQRLS 519

Query: 482 LG 483
           LG
Sbjct: 520 LG 521


>gi|291225440|ref|XP_002732713.1| PREDICTED: ubiquitin specific protease 8-like [Saccoglossus
            kowalevskii]
          Length = 1150

 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 119/284 (41%), Gaps = 37/284 (13%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
            GL N GN CF+N+ +Q+L + +P               A Y    ++   ++  +    G
Sbjct: 810  GLKNLGNTCFMNSIIQSLANSTPL--------------ATYFIEGSYKYHINRENKLGRG 855

Query: 263  SSKKKNISVLDIG------RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
                +  +V+         R  SP  F+  +  F P           Q+D+QEFL F++D
Sbjct: 856  GKVAEEFAVVINAIWSGHYRSISPRDFKLTVSKFVPQFAGY-----EQQDSQEFLLFLLD 910

Query: 317  QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
             +H++L +++         NT L     +D+   +   N   +        S + ++F G
Sbjct: 911  GLHEDLNRVKHRKYIEEKDNTHLT----DDQAAQLAWNNHKRLNE------SIMVELFQG 960

Query: 377  QLKSVVKAQ-GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 435
            Q KS ++     K S T   F+ L L + S    ++ D ++ F+  E + G         
Sbjct: 961  QFKSTLQCLFCQKKSVTYDAFMYLSLPLLSNNRCSLYDCVKNFTKLEKVGGADKWFCPKC 1020

Query: 436  GV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
             V   A K ++I  L  IL++HL RFSY      KL   V FP+
Sbjct: 1021 KVHREANKRIEIWKLPHILLIHLKRFSYEGVWRHKLQTDVDFPI 1064


>gi|356498842|ref|XP_003518257.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine
           max]
          Length = 1036

 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 118/291 (40%), Gaps = 59/291 (20%)

Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDF 256
           +L P GLIN GN C+ NA LQ L    P    LLQ L ++      +     F   +   
Sbjct: 502 ELQPFGLINCGNSCYANAVLQCLAVTPPLTAYLLQGLHSKSCANKKWCFTCEFESLI--- 558

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
                       +   D   P SP    + L+N    +     G  R+EDA EFL  +++
Sbjct: 559 ------------LKSKDTNSPMSPLGILSQLQNIGSQL-----GNGREEDAHEFLRLVVE 601

Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
            M    L   G++ S         SL EE         N   +T             FGG
Sbjct: 602 TMQSVCLMESGDNMSD--------SLKEE--------TNLMGLT-------------FGG 632

Query: 377 QLKSVVKAQGNKASATVQPFLL-LHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSST 432
            L+S +K       +  Q  ++ L ++I  E + T+E+ALR F++ E L+G   YR    
Sbjct: 633 YLQSKIKCMKCGGKSERQERMMDLTVEIEGE-IATLEEALRQFTSAETLDGENKYRCVRC 691

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLG 483
                  AKK + +     +L + L RF  G  G  KL+K +RFP  L L 
Sbjct: 692 --KSYEKAKKKMTVLEAPNVLTIALKRFQSGKFG--KLNKPIRFPEILDLA 738


>gi|332219294|ref|XP_003258791.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Nomascus
           leucogenys]
          Length = 565

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 97/303 (32%), Positives = 131/303 (43%), Gaps = 47/303 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGYS-QQDAQEFLKLLMERL 313

Query: 319 HDELLKLQGESTSINGANTALV-------SLAEEDEWETVGPKN---KSAVTRTQSFLPS 368
           H E+ + +G       AN           SL E+ E       N   K  + R      S
Sbjct: 314 HLEINR-RGRRAPPILANVQFPLTRRKRGSLREQMEASDDDRANLMWKRYLERED----S 368

Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
            + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E 
Sbjct: 369 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 428

Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 480
           LE             T + K + +Q   +IL L L RFS  S+GS K     V FPLQ L
Sbjct: 429 LESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFS-ASRGSIKKSSVGVDFPLQRL 487

Query: 481 VLG 483
            LG
Sbjct: 488 SLG 490


>gi|224093752|ref|XP_002309976.1| predicted protein [Populus trichocarpa]
 gi|222852879|gb|EEE90426.1| predicted protein [Populus trichocarpa]
          Length = 370

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 131/300 (43%), Gaps = 37/300 (12%)

Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTL 246
           K++ D  P G     L N GN C+ N+ LQAL  C+PF + L E    +++I  A    L
Sbjct: 10  KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCAPFREQLLEYYANSKNIGDAEENLL 69

Query: 247 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
           T      +        SS+KK   V+      +P  F   LK       N +      +D
Sbjct: 70  TCLADLFTQI------SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQD 112

Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
           A EFL+F+++++ D L K   E+ ++          +   E    GPK+  A   ++  L
Sbjct: 113 AHEFLNFLLNELVDILEK---EAQAVKSETET----SSPPEKTANGPKHAQANGVSKEPL 165

Query: 367 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
            + +   F G L +  +  Q    +A  + F  L LDI  E   +I   L+ FS+ E L 
Sbjct: 166 VTWVHKNFQGILTNETRCLQCETVTARDETFFDLSLDI--EQNSSITSCLKNFSSTETLN 223

Query: 426 GY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
              +        +  A+K +KI+    IL++HL RF Y  Q     KL   V FPL+L L
Sbjct: 224 AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL 283


>gi|410906841|ref|XP_003966900.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Takifugu
           rubripes]
          Length = 374

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 126/284 (44%), Gaps = 37/284 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +  P+     LT         D  +  
Sbjct: 40  GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQ--PRRKESLLTCLA------DLFNSI 91

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D  
Sbjct: 92  ATQKKKVGVI------PPKKFISRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-- 138

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
             LQ E +     N  LV         + G K       TQ    + + +IF G L +  
Sbjct: 139 -LLQEEKSQERQQNGKLVQNGGGGVGGSDGGKE------TQQ---TWVHEIFQGTLTNET 188

Query: 383 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +    +A S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 189 RCLNCEAVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEA 246

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
           +K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 247 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 290


>gi|327286811|ref|XP_003228123.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Anolis
           carolinensis]
          Length = 533

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 132/318 (41%), Gaps = 54/318 (16%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAF------ 249
           L   GL N GN CF+NA LQ+L +   F    +EL     R+   AG  T          
Sbjct: 157 LCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNG 216

Query: 250 VGFVSDFDTPSGGSSKKKNISVLDIGR--PFSP-SMFEAVLKNFTPDVPNSISGRPRQED 306
           V  V +F         +K +  L  G    FSP S+F  V K     +PN   G  +Q+D
Sbjct: 217 VSLVEEF---------RKTLCALWQGSQAAFSPESLFYVVWK----IMPN-FRGY-QQQD 261

Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
           A EF+ +++D +H E   LQG     NG + + V L E       G    +  +      
Sbjct: 262 AHEFMRYLLDHLHRE---LQG---GFNGVSRSSVLLQENSGLSAGGRCCINGAS------ 309

Query: 367 PSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIED 413
            + ++ IFGG L++ V        S    PFL L LDI S+               T+ D
Sbjct: 310 -TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPTCTLRD 368

Query: 414 ALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 472
            LR F+  E L E              + K   IQ L K+L LHL RF + +    K+  
Sbjct: 369 CLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDT 428

Query: 473 SVRFPLQLVLGRDLLVTP 490
            V FPL+ +  +  L+ P
Sbjct: 429 YVEFPLRGLDMKCFLLEP 446


>gi|392337921|ref|XP_001074389.3| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase DUB-1 [Rattus norvegicus]
          Length = 549

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 123/302 (40%), Gaps = 70/302 (23%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYP---TLTAFVGFVSD--FD 257
           GL N GN C+LNA LQ L    P    +  L      +  YP    + A    V+     
Sbjct: 97  GLQNIGNSCYLNAVLQCLTHTPPLADYM--LSQEHSQRCCYPEGCKMCAMEAHVTQSLLH 154

Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
           + SGG  K              PS           ++  S   + RQEDA EFL F ++ 
Sbjct: 155 SHSGGVMK--------------PS-----------EILTSTFHKHRQEDAHEFLMFTLNA 189

Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
           MH+  L+                           G K     ++  S +     DIFGGQ
Sbjct: 190 MHESCLR---------------------------GCKQSETSSKDSSLI----YDIFGGQ 218

Query: 378 LKSVVKAQGNKASA-TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 436
           ++S +K    + +  +  PFL L LDI S    +++ AL      E L+G      G   
Sbjct: 219 MRSQIKCHHCQGTLDSYDPFLNLFLDICS--AQSVKQALEDLVKLEELQGDNAYYCGRCR 276

Query: 437 -VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVL 495
             + A K+ K+QT SK+L+L L R SY   G  KL++ V +P  L L +  L  P+A  L
Sbjct: 277 EKMPASKTTKVQTASKVLLLVLNR-SYDF-GGDKLNRVVSYPEYLDL-QPYLSQPTAGPL 333

Query: 496 QF 497
            +
Sbjct: 334 PY 335


>gi|296486535|tpg|DAA28648.1| TPA: ubiquitin specific peptidase 46-like [Bos taurus]
          Length = 382

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 141/327 (43%), Gaps = 61/327 (18%)

Query: 164 IDGRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSC 223
           IDG   NA+A    I G ++ P   INE           GL+N GN C+ N+ LQAL  C
Sbjct: 25  IDGEGTNASALEKDI-GPEQFP---INEHY--------FGLVNFGNTCYCNSVLQALYFC 72

Query: 224 SPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMF 283
            PF + +   + +   K    T  A        D     +++KK + V+       P  F
Sbjct: 73  RPFRENVLAYKAQQKKKENLLTCLA--------DLFHSIATQKKKVGVI------PPKKF 118

Query: 284 EAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSING--ANTALVS 341
            + L+       N +     Q+DA EFL+++++ + D +L+ + +    NG   N  +  
Sbjct: 119 ISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-ILQEEKKQEKQNGKLKNGNMNE 172

Query: 342 LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLH 400
            AE          NK  +T         + +IF G L +  +       S+  + FL L 
Sbjct: 173 PAE---------NNKPELT--------WVHEIFQGTLTNETRCLNCETVSSKDEDFLDLS 215

Query: 401 LDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHL 457
           +D+  E   +I   LR FS  E L   + Y   +  +     A+K ++++ L  IL LHL
Sbjct: 216 VDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ--EAQKRMRVKKLPMILALHL 271

Query: 458 MRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            RF Y  Q    TKL   V FPL+L L
Sbjct: 272 KRFKYMEQLHRYTKLSYRVVFPLELRL 298


>gi|125817446|ref|XP_001337596.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Danio
           rerio]
 gi|125817457|ref|XP_692507.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Danio
           rerio]
          Length = 398

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 123/283 (43%), Gaps = 33/283 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPT-LTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +       L++   R+  +        A    + +F     
Sbjct: 63  GLRNLGNTCFMNSILQCLSN----THDLRDYCLRNTHRTDLNNNCRAKAALMDEF----- 113

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
            +   + I         SPS F+  ++ + P           Q+DAQEFL F++D +H+E
Sbjct: 114 -AKLTQTIWTSASNEAISPSDFKMQIQKYAPRFVGY-----NQQDAQEFLRFLLDGLHNE 167

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
           + ++  +S     A    +    EDE      K K    +      S + D+F GQLKS 
Sbjct: 168 VNRVTVKSR----APVEDLDHLSEDE------KGKRMWNKYLESEDSKVVDLFVGQLKSS 217

Query: 382 VKAQGNKASATV-QPFLLLHLDIYSEAVH-TIEDALRLFSAPENLEGYRTSSTGNAGVVT 439
           +        +TV  PF  L L I   +   ++ D LRLF+  + L+G    +       T
Sbjct: 218 LTCSECGFCSTVFDPFWDLSLPIAKTSGEVSLNDCLRLFTKEDVLDGNERPTCHRCK--T 275

Query: 440 AKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
            +K  K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 276 RRKCTKKFTIQKFPKILVLHLKRFSECRVRTSKLSTFVNFPLK 318


>gi|12847085|dbj|BAB27431.1| unnamed protein product [Mus musculus]
          Length = 569

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 128/305 (41%), Gaps = 47/305 (15%)

Query: 203 GLINSGNL---CFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSD 255
           GL N GN    CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +  
Sbjct: 213 GLRNLGNTLPQCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGA 271

Query: 256 FDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
              P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M
Sbjct: 272 LWHP-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLM 313

Query: 316 DQMHDELLKLQGESTSINGANTALV-------SLAEEDEWETVGPKN---KSAVTRTQSF 365
           +++H E+ +    +  I  +            +L EE E       N   K  + R    
Sbjct: 314 ERLHLEINRRGRRAPPILASGPVPSPPCRGGGALHEEPELSDDDRANLMWKRYLERED-- 371

Query: 366 LPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSA 420
             S + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+ 
Sbjct: 372 --SKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTK 429

Query: 421 PENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
            E LE             T + K + +Q   +IL+LHL RFS       K    V FPLQ
Sbjct: 430 EEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFSTSRGSIKKSSVGVDFPLQ 489

Query: 480 -LVLG 483
            L LG
Sbjct: 490 RLSLG 494


>gi|123479953|ref|XP_001323132.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
           [Trichomonas vaginalis G3]
 gi|121905991|gb|EAY10909.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
           [Trichomonas vaginalis G3]
          Length = 393

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 142/345 (41%), Gaps = 54/345 (15%)

Query: 162 GNIDGRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLL------PRGLINSGNLCFLNA 215
           GN++  ++ A+A  + +   K+   K     +++ K  +      PRGL+N G +CF NA
Sbjct: 15  GNVEFPEEIASAYKTILQDGKDSIEKDFATNLQTGKYFVTPMVVQPRGLMNRGLMCFANA 74

Query: 216 TLQALMSCSPFVQLLQELRTR-----DIPKAGYPTLTAFVGFVSDFDTPSGGSSKK---- 266
           ++Q L +  PFV     ++T      D  +   P+ TA   F+++F      SS      
Sbjct: 75  SIQLLFASPPFVSFANFMKTYYPLFSDKQREVIPSWTALYKFLNNFKFSDSASSDGVYTS 134

Query: 267 -KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKL 325
            K++ ++D     +  +   V   F     N+      QEDA EFLS+ ++++HDEL  L
Sbjct: 135 LKSLDLIDKASATNTDILNEVFGPF-----NAKRKPKTQEDASEFLSYFLNKLHDELCSL 189

Query: 326 QG-----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  ES+  N   T             +G K +  V  TQ  L S LS IF   ++S
Sbjct: 190 IELYPVPESSDPNNRRTV------------IGGKIQQIVD-TQGKL-SPLSKIFATFVRS 235

Query: 381 VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTA 440
                    S   +  L+L L IY   + ++  A+R +   E +              T 
Sbjct: 236 ETLDHHKVRSVNAEVTLVLQLPIYE--IKSLGQAIRRYLEVEQITD------------TI 281

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRD 485
            K   +  L   LI+   RF +   G  KL   V +P  L L  D
Sbjct: 282 SKRNHLTALPMSLIIGFTRFGFNDYGPMKLTGIVEYPEILRLEAD 326


>gi|428179085|gb|EKX47957.1| hypothetical protein GUITHDRAFT_106044 [Guillardia theta CCMP2712]
          Length = 353

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 129/304 (42%), Gaps = 66/304 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL N GN CF+N+ LQ L++ +P                    L+A+  FV+D    SG 
Sbjct: 13  GLSNLGNTCFMNSVLQCLVNTAP--------------------LSAY--FVAD--EYSGE 48

Query: 263 SSKK-KNISVLDIGRPFSPSMFEAVLKNFTPDVPNS----ISGRPRQ------EDAQEFL 311
            ++  K+  ++D     +  M+       T   P++    IS   RQ       D+QE L
Sbjct: 49  LNRSSKSWQLVDDYASLAKDMWRTAGNTHTSINPSALKMQISRWARQFSGYEQHDSQELL 108

Query: 312 SFIMDQMHDELLKLQGES-TSINGANTALVSLAEEDE--WETVGPKNKSAVTRTQSFLPS 368
            F++D + + L++ + E     +  +    ++AE+    WE    +N S +T        
Sbjct: 109 RFLLDGLQEGLMRPKREPPWPYDDKDFEKRAIAEQSRRMWENYLARNNSQIT-------- 160

Query: 369 ALSDIFGGQLKS-VVKAQGNKASATVQPFLLLHLDI-----------YSEAVHTIEDALR 416
              DIF GQL+S V  A   + S    PF+ L L I            S     ++D L 
Sbjct: 161 ---DIFCGQLRSRVTCATCKRESNCYDPFMDLSLPIPKKFQGLSKWRSSAQECKLQDCLE 217

Query: 417 LFSAPENLEG---YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKS 473
            F   E LEG   Y  S      V  A K +KI     +L+LHL RF   S   +KL+ S
Sbjct: 218 QFVDEEKLEGNEMYYCSRCKKHQV--AIKEMKIFRCPLVLVLHLKRFDKRSSSRSKLNAS 275

Query: 474 VRFP 477
           VRFP
Sbjct: 276 VRFP 279


>gi|392344528|ref|XP_001071809.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein 2
           [Rattus norvegicus]
          Length = 832

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 123/302 (40%), Gaps = 70/302 (23%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYP---TLTAFVGFVSD--FD 257
           GL N GN C+LNA LQ L    P    +  L      +  YP    + A    V+     
Sbjct: 380 GLQNIGNSCYLNAVLQCLTHTPPLADYM--LSQEHSQRCCYPEGCKMCAMEAHVTQSLLH 437

Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
           + SGG  K              PS           ++  S   + RQEDA EFL F ++ 
Sbjct: 438 SHSGGVMK--------------PS-----------EILTSTFHKHRQEDAHEFLMFTLNA 472

Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
           MH+  L+                           G K     ++  S +     DIFGGQ
Sbjct: 473 MHESCLR---------------------------GCKQSETSSKDSSLI----YDIFGGQ 501

Query: 378 LKSVVKAQGNKASA-TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 436
           ++S +K    + +  +  PFL L LDI S    +++ AL      E L+G      G   
Sbjct: 502 MRSQIKCHHCQGTLDSYDPFLNLFLDICS--AQSVKQALEDLVKLEELQGDNAYYCGRCR 559

Query: 437 -VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVL 495
             + A K+ K+QT SK+L+L L R SY   G  KL++ V +P  L L +  L  P+A  L
Sbjct: 560 EKMPASKTTKVQTASKVLLLVLNR-SYDF-GGDKLNRVVSYPEYLDL-QPYLSQPTAGPL 616

Query: 496 QF 497
            +
Sbjct: 617 PY 618


>gi|413923519|gb|AFW63451.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
           [Zea mays]
          Length = 591

 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 123/294 (41%), Gaps = 73/294 (24%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD------IPKAGYPTLTAFVGFVSDF 256
           GL N GN CFLNATLQ +    P   L  +LR+ D        K G+ +  A    V + 
Sbjct: 45  GLSNMGNTCFLNATLQCITHTVP---LFLKLRSTDHSTPCSYNKDGFCSFCALKEHVDE- 100

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
                        S+   G   +P+ F   L+  + D         +QEDA EFL  ++D
Sbjct: 101 -------------SIQRSGSVIAPAKFRDNLRKLSSDF-----WPGQQEDAHEFLRCLLD 142

Query: 317 QMH----DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSD 372
            +H    D + K +G S              EE                      S +++
Sbjct: 143 NLHKCTLDPMSKGKGSS------------FDEE----------------------SIVNE 168

Query: 373 IFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYR 428
           IFGGQLKS +   +   +S T +PFL L L+I  + V  + DAL+ F+  E +   E   
Sbjct: 169 IFGGQLKSHLSCCECGHSSETFEPFLDLSLEI--DQVDHLVDALQSFTKVEQIGDSENKL 226

Query: 429 TSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 482
           T  + NA V +  K + +     ++  HL RF+       K+ K V +PL++ L
Sbjct: 227 TCESCNAQV-SKNKQLTLHRAPDVIAFHLKRFTTLDNSVEKIDKHVVYPLEVDL 279


>gi|163914907|ref|NP_001106637.1| ubiquitin specific peptidase 46 [Xenopus (Silurana) tropicalis]
 gi|160774253|gb|AAI55531.1| LOC100127879 protein [Xenopus (Silurana) tropicalis]
          Length = 369

 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 127/284 (44%), Gaps = 42/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +  P+     LT         D  +  
Sbjct: 40  GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQ--PRKKESLLTCLA------DLFNSI 91

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D L
Sbjct: 92  ATQKKKVGVI------PPKKFISRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADLL 140

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG        A E E        KS +T         + +IF G L +  
Sbjct: 141 LEERKQEKQ-NGKLQNGTLEAPEPE--------KSDLT--------WVHEIFQGTLTNET 183

Query: 383 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +    +A S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 184 RCLNCEAVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEA 241

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
           +K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 242 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 285


>gi|344230726|gb|EGV62611.1| cysteine proteinase [Candida tenuis ATCC 10573]
          Length = 314

 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 55/230 (23%)

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEE----------------- 345
           +QEDA+EFL +++D +H+EL+       SI   N   +SL  E                 
Sbjct: 16  QQEDAEEFLGYLLDGLHEELVH------SIREVNNEQISLLLETVADNETKLQIKNAIKI 69

Query: 346 -----------------------DEWETVGPKNKSAVT-RTQSFLPSALSDIFGGQLKSV 381
                                  + W  +G  +K   + RT    PS +  IFGGQ +SV
Sbjct: 70  IKKLNNSSNGGNDNDNSNDDDDNEGWNEIGGGHKKVSSKRTVEIEPSPIKTIFGGQFRSV 129

Query: 382 VKAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTA 440
           ++    K  S T+ PF  + LDI ++ ++ IEDA +  + PE +         +   V A
Sbjct: 130 LQIPNKKDQSITLDPFQCIQLDIKADQINNIEDAFKQLNEPEQI----PFKLNDNKEVLA 185

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGS---TKLHKSVRFPLQLVLGRDLL 487
           KK   I +L  +L++HL RFS+ +  +    KL K + +  +L +  +L 
Sbjct: 186 KKQTFIDSLPDVLVIHLKRFSFENVNNGNIEKLRKKIEYTHKLSIPLELF 235


>gi|356540277|ref|XP_003538616.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Glycine
           max]
          Length = 369

 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 130/300 (43%), Gaps = 37/300 (12%)

Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTL 246
           K++ D  P G     L N GN C+ N+ LQAL  C PF + L E     + I  A    L
Sbjct: 10  KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKSIADAEENLL 69

Query: 247 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
           T      S        SS+KK   V+      +P  F   LK       N +      +D
Sbjct: 70  TCLADLFSQI------SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQD 112

Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
           A EFL+F+++++ D +L+ + +S   N   T+  S     E    GPKN  A    +  L
Sbjct: 113 AHEFLNFLLNELVD-ILEKEAQSAK-NDQETSPPS-----EKAANGPKNGLANGAKKEPL 165

Query: 367 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
            + +   F G L +  +  +    +A  + F  L LDI  E   +I   L+ FS+ E L 
Sbjct: 166 VTWVHKNFQGILTNETRCLRCETVTARDETFFDLSLDI--EQNSSITSCLKNFSSTETLN 223

Query: 426 GY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
              +        +  A+K +KI+    IL++HL RF Y  Q     KL   V FPL+L L
Sbjct: 224 AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL 283


>gi|71654677|ref|XP_815953.1| ubiquitin hydrolase [Trypanosoma cruzi strain CL Brener]
 gi|70881048|gb|EAN94102.1| ubiquitin hydrolase, putative [Trypanosoma cruzi]
          Length = 438

 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 135/294 (45%), Gaps = 35/294 (11%)

Query: 202 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           RG++N+ N CF+NAT QAL+   PF QL     +  +     PTL     ++  +     
Sbjct: 80  RGILNNSNYCFMNATAQALVFLPPFAQLAI---SAVVEAELCPTLATLGKWMLSY----- 131

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR---PRQEDAQEFLSFIMDQM 318
             ++  N  V  +  P      +AV          S  G+     QEDA EF+  +++ +
Sbjct: 132 -WARAPNQLVPPLSLP------KAVRGQTASSAAPSNWGKMDGSSQEDATEFMHHLLEVI 184

Query: 319 HDELLKLQGESTS-----INGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSD- 372
             EL  L+G  +      I   NT+L   +E+  W  V  + + +V        S L D 
Sbjct: 185 QTELCALEGSYSESPTGRIRDPNTSLEGNSEKKGWTFVKGRERLSVREHCDKSRSVLLDA 244

Query: 373 IFGGQLKSVVKAQG---NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT 429
           +FGG +++ +K +    + AS  V+ F LL +D+   A  ++E AL       +L+  R 
Sbjct: 245 VFGGAVENHLKGKSKLKDHASVLVEGFFLLQVDVGFSAECSLEMALE-----RSLQRERV 299

Query: 430 SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS-TKLHKSVRFPLQLVL 482
             +  A  +   K++K++ L  +L+L L R++  ++G   KL   VRF   LVL
Sbjct: 300 YDSARAKDLL--KTMKLRRLPTVLLLQLQRWAVTAEGELVKLDNLVRFSKTLVL 351


>gi|403358774|gb|EJY79042.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
          Length = 847

 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 132/321 (41%), Gaps = 53/321 (16%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL------QELRTRDIPKAGYPTLTAFVGFVSDF 256
           GL N GN CFLN  +Q L S  P           + L T +    G      +   + D 
Sbjct: 224 GLYNMGNTCFLNTAVQCLSSVQPLTDFFIGNLHKKLLNTTNPMGTGGDVTLRYANLIKDI 283

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
                G  +K             P+ F   LK  +   P+ + G+  Q+DAQEFL++I+D
Sbjct: 284 ---WQGKEEK-----------IYPAQF---LKTLSKHAPHLVCGQ--QQDAQEFLAYILD 324

Query: 317 QMHDELLK--------------LQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
            +H++L +              L  +S+     ++ L  L + D  E +  +   A    
Sbjct: 325 SLHEDLNRADKLTNMKQKREKELSKKSSKNEDEDSLLDKLLDTDPSEEL--QEHQAYESW 382

Query: 363 QSFL---PSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSEAVH--TIEDALR 416
           +  L    S + D+F GQLKS +K    N  S     F+ L + I  + +    +E+ + 
Sbjct: 383 KDHLLNNRSIIVDLFQGQLKSTLKCLVCNHMSIKFDSFMYLTIPIPQKMMSDPKLEECVE 442

Query: 417 LFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVR 475
            F+  E L+G              A K + I  L  +LI++L RF +  +   K++  V 
Sbjct: 443 EFTKEEILDGQNKWKCPKCDKFQRATKKIDIWKLPSVLIINLKRFEFNQKKKAKINDLVE 502

Query: 476 FPLQLVLGRDLLVTPSAEVLQ 496
           FPL     ++L +TP    LQ
Sbjct: 503 FPL-----KNLDLTPYVSKLQ 518


>gi|348540583|ref|XP_003457767.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform 1
           [Oreochromis niloticus]
          Length = 371

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 127/284 (44%), Gaps = 40/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +  P+     LT         D  +  
Sbjct: 40  GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQ--PRRKESLLTCLA------DLFNSI 91

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D L
Sbjct: 92  ATQKKKVGVI------PPKKFISRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADLL 140

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
            + + +    NG       L +    E  G K       TQ    + + +IF G L +  
Sbjct: 141 QEEKSQERQQNG------KLVQNGGGEGEGGKE------TQQ---TWVHEIFQGTLTNET 185

Query: 383 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +    +A S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 186 RCLNCEAVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEA 243

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
           +K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 244 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 287


>gi|145524988|ref|XP_001448316.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124415860|emb|CAK80919.1| unnamed protein product [Paramecium tetraurelia]
          Length = 482

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 122/291 (41%), Gaps = 22/291 (7%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPTLTAFVGFVSDFDTP 259
           GL N GN C+ N  +  +    P V        +     P +G  T  AFV  +      
Sbjct: 65  GLKNLGNTCYFNTAIHCISHTQPLVDYFLSKAYKVNSSCPTSGNIT-KAFVSLMEQIWDD 123

Query: 260 SGGSSKKKNISVLDIG---RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
               ++ K+   L  G   +P++  +    L N         +    QED QE LS+++D
Sbjct: 124 ENCFAESKDFKQLVQGQKLKPYNKCINPIKLLNLLQKYSKRFA-LGDQEDCQELLSYLLD 182

Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKS-AVTRTQSFLPSALSDIFG 375
            +H EL + Q  S SI    T           E V PK  + +         S + D+F 
Sbjct: 183 LLHQELNRSQPNSKSITKDYTG----------EYVDPKWAADSWGEHLKINRSIIVDLFQ 232

Query: 376 GQLKSVVKAQ-GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 434
           GQLKS  + Q     S   +PFL L+L I  + V +I   L LF  PE L G       N
Sbjct: 233 GQLKSTCQCQECGFQSHKFEPFLFLNLPIPKQKV-SIYKCLDLFQEPELLSGSCQWKCPN 291

Query: 435 AGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGR 484
             +    KK +++  L   LI+HL RF +  +   KL+  V FPL+L + +
Sbjct: 292 CKINRDFKKQIQLWKLPNQLIIHLKRFEFHHRKQVKLNTVVEFPLELDMAQ 342


>gi|148707161|gb|EDL39108.1| ubiquitin specific peptidase 21, isoform CRA_b [Mus musculus]
          Length = 566

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 126/302 (41%), Gaps = 44/302 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313

Query: 319 HDELLKLQGESTSINGANTALV-------SLAEEDEWETVGPKN---KSAVTRTQSFLPS 368
           H E+ +    +  I  +            +L EE E       N   K  + R      S
Sbjct: 314 HLEINRRGRRAPPILASGPVPSPPCRGGGALHEEPELSDDDRANLMWKRYLERED----S 369

Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
            + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E 
Sbjct: 370 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEE 429

Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LV 481
           LE             T + K + +Q   +IL L L RFS       K    V FPLQ L 
Sbjct: 430 LESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFSTSRGSIKKSSVGVDFPLQRLS 489

Query: 482 LG 483
           LG
Sbjct: 490 LG 491


>gi|356512699|ref|XP_003525054.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Glycine
           max]
          Length = 369

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 128/300 (42%), Gaps = 37/300 (12%)

Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTL 246
           K++ D  P G     L N GN C+ N+ LQAL  C PF + L E     + I       L
Sbjct: 10  KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSILDGEENLL 69

Query: 247 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
           T      S        SS+KK   V+      +P  F   LK       N +      +D
Sbjct: 70  TCLADLFSQI------SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQD 112

Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
           A EFL+F+++++ D +L+ + ++   +   +         E    GPKN  A    +  L
Sbjct: 113 AHEFLNFLLNELVD-ILEKEAQAAKTDQETSP------PSEKAVNGPKNGQANGVHKEPL 165

Query: 367 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
            + +   F G L +  +  Q    +A  + FL L LDI  E   +I   L+ FS+ E L 
Sbjct: 166 VTWVHKNFQGILTNETRCLQCETVTARDETFLDLSLDI--EQNSSITSCLKNFSSTETLN 223

Query: 426 GY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
              +        +  A+K +KI+    IL++HL RF Y  Q     KL   V FPL+L L
Sbjct: 224 AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKL 283


>gi|195130331|ref|XP_002009605.1| GI15450 [Drosophila mojavensis]
 gi|193908055|gb|EDW06922.1| GI15450 [Drosophila mojavensis]
          Length = 1158

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 131/323 (40%), Gaps = 48/323 (14%)

Query: 166  GRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLI---NSGNLCFLNATLQALMS 222
            GR+   A  +S  S S      +++E  KS +D    GL    N GN CF+N+ +Q L  
Sbjct: 793  GRNSTNATTSSIGSSSLSTKHNSLDEGYKSSRDEKFEGLCGLRNIGNTCFMNSVIQCLSH 852

Query: 223  CSPFVQLLQ--ELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSP 280
             +   + L+     TR         L  F   + +  T     S   +++ +++ R FS 
Sbjct: 853  TTELTRFLRAHHTNTRTATSKDQQILYEFAKLIQEMWT-----SNVHSVTPMELKRAFS- 906

Query: 281  SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL-LKLQGESTSI--NGANT 337
                           + +     Q+DAQEFL F +D +H  L   ++GE+ +I  N ++ 
Sbjct: 907  -------------TKHRMYSDYNQQDAQEFLRFFLDSLHSALNTGVKGETLNIDDNLSDN 953

Query: 338  ALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQ--GNKASATVQP 395
                L     WE       S +            D+F GQLKS +K    GN  S T  P
Sbjct: 954  KKADLT----WEWYARHENSLI-----------RDLFVGQLKSTLKCTTCGN-TSVTFDP 997

Query: 396  FLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV-VTAKKSVKIQTLSKILI 454
            F  L + + S +   +E  L LF   E L+G    +           KS  IQ   K L+
Sbjct: 998  FWDLSVPLPSSSRCKLEACLDLFIREEVLDGDEMPTCSKCKTRRKCTKSFTIQRFPKYLV 1057

Query: 455  LHLMRFSYGSQGSTKLHKSVRFP 477
            +HL RFS      +KL   V FP
Sbjct: 1058 IHLKRFS--ETRWSKLSNIVEFP 1078


>gi|297799550|ref|XP_002867659.1| ubiquitin-specific protease 16 [Arabidopsis lyrata subsp. lyrata]
 gi|297313495|gb|EFH43918.1| ubiquitin-specific protease 16 [Arabidopsis lyrata subsp. lyrata]
          Length = 1007

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 119/288 (41%), Gaps = 58/288 (20%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDFDTP 259
           P GLIN GN CF N   Q LM   P     LQ+L +R   K        F   V      
Sbjct: 539 PCGLINVGNSCFANVVFQCLMFTPPLTTYFLQQLHSRACTKKEQCFTCGFEKLV--LKAK 596

Query: 260 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
            G S             P SP+   + L+N          G  ++EDA EFL F++D M 
Sbjct: 597 EGKS-------------PLSPNGLLSQLQNI-----GIFLGNGKEEDAHEFLRFVVDTM- 637

Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
                   +S  I  +   +   ++ ++   +G                     FGG L+
Sbjct: 638 --------QSVCIKASEYDMPKSSKLEDTTLIGL-------------------TFGGYLR 670

Query: 380 SVVKAQGNKASATVQPFLL-LHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNA 435
           S +K    +  + ++  ++ L ++I  + + T++DALR F+  E L+G   YR  S  + 
Sbjct: 671 SKIKCMKCQVKSELREKMMDLTVEIDGD-ISTLDDALRRFTRTEILDGDNKYRCGSCKS- 728

Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLG 483
               AKK +KI     +L + L RF  G  G  KL+K +RFP  L L 
Sbjct: 729 -YERAKKKLKITDPPNVLTIALKRFQAGKFG--KLNKLIRFPETLDLA 773


>gi|410912832|ref|XP_003969893.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Takifugu
            rubripes]
          Length = 1082

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 123/304 (40%), Gaps = 61/304 (20%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVG---FVSDFDTP 259
            GL N GN C++N+ LQ L +                     P LT +     ++ D +  
Sbjct: 751  GLRNLGNTCYMNSVLQCLCNA--------------------PALTEYFNNNYYMDDINRS 790

Query: 260  SGGSSKKKNISVLDIGRPFS---PSMFEAVLKNFTP--------DVPNSISGRPRQEDAQ 308
            +    K       D+   F     +++  + K  +P         +    SG   Q+D+Q
Sbjct: 791  NILGHKG------DVAEEFGVIMKALWSGLYKCISPRDFKITIGKINEQFSGY-EQQDSQ 843

Query: 309  EFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEED-EWETVGPKNKSAVTRTQSFLP 367
            E L F+MD +H++L K           N  L      D  W      N+S +        
Sbjct: 844  ELLLFLMDGLHEDLNKADNRKRYKEEENDHLDDQTAADVAWRKHKLLNESIIVA------ 897

Query: 368  SALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-E 425
                 +F GQ KS V+    ++ S T + F+ L L + S +  +++D LRLFS  E L +
Sbjct: 898  -----LFQGQFKSTVQCLTCHRKSRTFETFMYLSLPLASTSKCSLQDCLRLFSKEEKLTD 952

Query: 426  GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL------Q 479
              +           + K ++I  +  IL++HL RFSY  +   KL  SV FPL      Q
Sbjct: 953  NNKVFCRHCKAHRDSTKKLEIWKVPPILLVHLKRFSYEGRWKQKLQTSVDFPLDSLDLAQ 1012

Query: 480  LVLG 483
             V+G
Sbjct: 1013 YVIG 1016


>gi|356525469|ref|XP_003531347.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like isoform 1
           [Glycine max]
          Length = 369

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 128/300 (42%), Gaps = 37/300 (12%)

Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTL 246
           K++ D  P G     L N GN C+ N+ LQAL  C PF + L E     + I       L
Sbjct: 10  KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSILDGEENLL 69

Query: 247 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
           T      S        SS+KK   V+      +P  F   LK       N +      +D
Sbjct: 70  TCLADLFSQI------SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQD 112

Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
           A EFL+F+++++ D +L+ + ++   +   +         E    GPKN  A    +  L
Sbjct: 113 AHEFLNFLLNELVD-ILEKEAQAAKTDQETSP------PSEKAVNGPKNGQANGVHKEPL 165

Query: 367 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
            + +   F G L +  +  Q    +A  + FL L LDI  E   +I   L+ FS+ E L 
Sbjct: 166 VTWVHKNFQGILTNETRCLQCETVTARDETFLDLSLDI--EQNSSITSCLKNFSSTETLN 223

Query: 426 GY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
              +        +  A+K +KI+    IL++HL RF Y  Q     KL   V FPL+L L
Sbjct: 224 AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKL 283


>gi|18416380|ref|NP_567705.1| ubiquitin carboxyl-terminal hydrolase 16 [Arabidopsis thaliana]
 gi|75265551|sp|Q9SB51.1|UBP16_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 16; AltName:
           Full=Deubiquitinating enzyme 16; Short=AtUBP16; AltName:
           Full=Ubiquitin thioesterase 16; AltName:
           Full=Ubiquitin-specific-processing protease 16
 gi|4220534|emb|CAA23007.1| putative protein [Arabidopsis thaliana]
 gi|7269306|emb|CAB79366.1| putative protein [Arabidopsis thaliana]
 gi|332659526|gb|AEE84926.1| ubiquitin carboxyl-terminal hydrolase 16 [Arabidopsis thaliana]
          Length = 1008

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 119/291 (40%), Gaps = 58/291 (19%)

Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDF 256
           +  P GLIN GN CF N   Q LM   P     LQ+  +R   K        F   V   
Sbjct: 538 EFQPCGLINVGNSCFANVVFQCLMFTPPLTTYFLQQFHSRACTKKEQCFTCGFEKLV--- 594

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
                       +   +   P SP+   + L+N          G  ++EDA EFL F++D
Sbjct: 595 ------------VKAKEEKSPLSPNGLLSQLQNI-----GIFLGNGKEEDAHEFLRFVVD 637

Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
            M         +S  I  +   +   ++ ++   +G                     FGG
Sbjct: 638 TM---------QSVCIKASEYDMTKSSKLEDTTLIGL-------------------TFGG 669

Query: 377 QLKSVVKAQGNKASATVQPFLL-LHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSST 432
            L+S +K    +  + ++  ++ L ++I  + + T++DALR F+  E L+G   YR  S 
Sbjct: 670 YLRSKIKCMKCQVKSELREKMMDLTVEIDGD-ISTLDDALRRFTRTEILDGENKYRCGSC 728

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLG 483
            +     AKK +KI     +L + L RF  G  G  KL+K +RFP  L L 
Sbjct: 729 KS--YERAKKKLKITEPPNVLTIALKRFQAGKFG--KLNKLIRFPETLDLA 775


>gi|432901665|ref|XP_004076886.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Oryzias
           latipes]
          Length = 401

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 129/295 (43%), Gaps = 35/295 (11%)

Query: 193 VKSVKDLLPRGLI---NSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAF 249
           +   K+  P+GL+   N GN CF+N+ LQ L + S     L++   R++ +      T  
Sbjct: 47  INQAKNKSPQGLVGLRNLGNTCFMNSILQCLSNTSE----LRDYCLRNVHRLDVNNRTN- 101

Query: 250 VGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQE 309
              + +F   +       NI  +      SPS F + ++   P           Q+DAQE
Sbjct: 102 AALMEEFAKLTQSLWTSVNIEAI------SPSDFRSEIQRVAPKFVGC-----NQQDAQE 150

Query: 310 FLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 369
           FL  ++D +H+E          +N       S  E+ +  +   K+K       +   S 
Sbjct: 151 FLRSLLDGLHNE----------VNRVTVRPRSSVEDFDHYSDEEKSKRMWNLYLAREDSK 200

Query: 370 LSDIFGGQLKSVVKAQGNKASATV-QPFLLLHLDIYSE--AVHTIEDALRLFSAPENLEG 426
           + D+F GQLKS +        +T+  PF  L + I  E     T++D LRLF+  + L+G
Sbjct: 201 VVDLFVGQLKSSLTCTVCGFRSTMFDPFWDLSIPIAQERPGEVTLKDCLRLFTKEDVLDG 260

Query: 427 YRTSSTGNAGVVTAK--KSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                T N      K  K   IQ   +IL++HL RFS  +  S+KL   V FPL+
Sbjct: 261 -EEKPTCNKCKARRKCTKRFSIQKFPQILVIHLKRFSDSNSRSSKLSTFVNFPLK 314


>gi|387019715|gb|AFJ51975.1| Ubiquitin specific peptidase 46 [Crotalus adamanteus]
          Length = 369

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 130/286 (45%), Gaps = 46/286 (16%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  +        D  +  
Sbjct: 40  GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQARKKETLLTCLS--------DLFNSI 91

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D L
Sbjct: 92  ATQKKKVGVI------PPKRFISRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-L 139

Query: 323 LKLQGESTSINGA--NTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
           L+ + +    NG   N ++    E DE E      K+ +T         + +IF G L +
Sbjct: 140 LQEEKKQEKQNGKLQNGSI----ESDEGE------KAELT--------WVHEIFQGALTN 181

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVV 438
             +    +A S+  + FL L +D+  E   +I   LR FS  E L   Y+          
Sbjct: 182 ETRCLNCEAVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQ 239

Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 240 EAQKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 285


>gi|11993477|gb|AAG42757.1|AF302666_1 ubiquitin-specific protease 16 [Arabidopsis thaliana]
          Length = 1008

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 119/291 (40%), Gaps = 58/291 (19%)

Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDF 256
           +  P GLIN GN CF N   Q LM   P     LQ+  +R   K        F   V   
Sbjct: 538 EFQPCGLINVGNSCFANVVFQCLMFTPPLTTYFLQQFHSRACTKKEQCFTCGFEKLV--- 594

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
                       +   +   P SP+   + L+N          G  ++EDA EFL F++D
Sbjct: 595 ------------VKAKEEKSPLSPNGLLSQLQNI-----GIFLGNGKEEDAHEFLRFVVD 637

Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
            M         +S  I  +   +   ++ ++   +G                     FGG
Sbjct: 638 TM---------QSVCIKASEYDMTKSSKLEDTTLIGL-------------------TFGG 669

Query: 377 QLKSVVKAQGNKASATVQPFLL-LHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSST 432
            L+S +K    +  + ++  ++ L ++I  + + T++DALR F+  E L+G   YR  S 
Sbjct: 670 YLRSKIKCMKCQVKSELREKMMDLTVEIDGD-ISTLDDALRRFTRTEILDGENKYRCGSC 728

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLG 483
            +     AKK +KI     +L + L RF  G  G  KL+K +RFP  L L 
Sbjct: 729 KS--YERAKKKLKITEPPNVLTIALKRFQAGKFG--KLNKLIRFPETLDLA 775


>gi|159488883|ref|XP_001702430.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158271098|gb|EDO96925.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 347

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 127/303 (41%), Gaps = 54/303 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVG--FVSDFDTPS 260
           GL N GN CF+N++LQ L    P +Q                   AF+G  ++ D +  +
Sbjct: 4   GLSNLGNTCFMNSSLQCLAHAVPLMQ-------------------AFLGGTYIKDLNRTN 44

Query: 261 -----GGSSKKKNISVLDIGR----PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 311
                G  ++   + +  + R      SP  F+A +  F P      SG   Q D+QEFL
Sbjct: 45  PLGMKGELAEAFGMLLQQLWRGGVSSVSPRSFKAKIGRFAP----QFSGYA-QHDSQEFL 99

Query: 312 SFIMDQMHDEL--LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 369
           +F++D +H++   +K +    + +        LA E  W     +N S V          
Sbjct: 100 AFLLDGLHEDTNRIKTKPYFETKDEPGRPDEELATE-AWSQYRARNNSLVV--------- 149

Query: 370 LSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVH--TIEDALRLFSAPENLEG 426
             D F G LKS +   +    S    PF+ L L +         +ED +R+F  PE L+ 
Sbjct: 150 --DHFQGLLKSGLDCPKCAYHSVKFDPFMYLSLPLPESRRRPVALEDCMRVFLQPERLDE 207

Query: 427 YRTSSTGNAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVLGR 484
                       V A K + + +L ++L++HL RFSY      KL   V FPL  L LG 
Sbjct: 208 SDAWYCPRCKEHVCADKKLDLWSLPEVLVVHLKRFSYTRYSRNKLDTRVDFPLHGLDLGS 267

Query: 485 DLL 487
            +L
Sbjct: 268 YVL 270


>gi|50746997|ref|XP_420711.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Gallus gallus]
 gi|449500647|ref|XP_002193246.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Taeniopygia
           guttata]
          Length = 366

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 125/286 (43%), Gaps = 45/286 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  A        D     
Sbjct: 36  GLVNFGNTCYCNSVLQALYFCRPFRENVLSYKAQQKKKENLLTCLA--------DLFHSI 87

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D L
Sbjct: 88  ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIADIL 136

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
            + + +           ++ AEE+        NK  +T         + +IF G L +  
Sbjct: 137 QEEKKQEKQNGKLKNGNMNEAEEN--------NKQELT--------WVHEIFQGTLTNET 180

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGVV 438
           +       S+  + FL L +D+  E   +I   LR FS  E L   + Y   +  +    
Sbjct: 181 RCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ-- 236

Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 237 EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 282


>gi|255580900|ref|XP_002531269.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
 gi|223529154|gb|EEF31133.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
          Length = 369

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 132/298 (44%), Gaps = 33/298 (11%)

Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTA 248
           K++ D  P G     L N GN C+ N+ LQAL  C PF + L E    +  K+G      
Sbjct: 10  KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANN--KSGGDAEEN 67

Query: 249 FVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQ 308
            +  ++D  T    SS+KK   V+      +P  F   LK       N +      +DA 
Sbjct: 68  LLTCLADLFTQI--SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQDAH 114

Query: 309 EFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPS 368
           EFL+F+++++ D L K    + S    +++   +         GPKN  A   ++  L +
Sbjct: 115 EFLNFLLNELVDILEKEAQAAKSDPETSSSPEKIPN-------GPKNGQANGVSKEPLVT 167

Query: 369 ALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY 427
            +   F G L +  +  Q    +A  + F  L LDI  E   +I   L+ FS+ E L   
Sbjct: 168 WVHKNFQGILTNETRCLQCETVTARDETFFDLSLDI--EQNSSITSCLKNFSSTETLNAE 225

Query: 428 -RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL 482
            +        +  A+K +KI+    IL++HL RF Y  Q S   KL   V FPL+L L
Sbjct: 226 DKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLSRYKKLSYRVVFPLELKL 283


>gi|219110875|ref|XP_002177189.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411724|gb|EEC51652.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1003

 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 125/308 (40%), Gaps = 53/308 (17%)

Query: 200 LPRGLINSGNLCFLNATLQALMSCSPFVQLL-----QELRTRDIPKAGYPTLTAFV--GF 252
            P+G +N GN CFLN+T+Q L    PF Q L      E +  +  K        F+    
Sbjct: 241 YPKGFVNLGNTCFLNSTVQCLAYLPPFCQSLLSILSHESKHGEKRKTSQGRKVTFILRSL 300

Query: 253 VSDFDTPSGGSSKKKNISVLDIGRPFSP-SMFEAVLKNFTPDVPNSISGRP-RQEDAQEF 310
            S      GG++          G   +P ++ +AV    +         RP RQEDA EF
Sbjct: 301 FSQVHGIDGGTTHS--------GSSLAPRAIVQAVPTLGSCGSRKGYKFRPGRQEDAHEF 352

Query: 311 LSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSAL 370
           L  ++D M+D  LK  G + + +G             W    P  +   T       + +
Sbjct: 353 LVHLLDAMNDGELKEAGINQNASG-------------WRDRLPIPRLDET-------TFI 392

Query: 371 SDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY-R 428
             IFGG  +S V+    N  S T  P L L L++  +A +++  AL  F+  E L+   +
Sbjct: 393 HRIFGGYFRSQVRCTSCNNRSNTYDPLLNLSLEVSRKACNSVAQALHEFTRKETLDSQNQ 452

Query: 429 TSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--------------GSTKLHKSV 474
              +G    V A K + +      L + L RF+Y  +              G  K+ KS+
Sbjct: 453 WKCSGCKKYVCATKQLTVFRPPLSLCIQLKRFTYSGRLKFSVGFGSFGNGGGGQKISKSI 512

Query: 475 RFPLQLVL 482
            FP QL L
Sbjct: 513 EFPAQLKL 520


>gi|449490903|ref|XP_004158744.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 23-like [Cucumis sativus]
          Length = 898

 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 112/279 (40%), Gaps = 58/279 (20%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CFLN+ LQ L    P    LQ  + ++    AG+  L A    VS       
Sbjct: 102 GLQNLGNTCFLNSVLQCLTYTEPLAAYLQSGKHQNSCHVAGFCALCAIQKHVSR------ 155

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
                   ++   GR  +P    + L+  + +  N+     RQEDA E++  +++ MH  
Sbjct: 156 --------ALQSSGRILAPKDLVSNLRCISRNFRNA-----RQEDAHEYMVNLLESMHKC 202

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
            L L   S S +    +LV                                IFGG+L+S 
Sbjct: 203 CLPLGLPSESPSAYEKSLV------------------------------HKIFGGRLRSQ 232

Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG--YRTSSTGNAGVV 438
           VK  Q +  S    PFL L LDI      +I  A + F+ PE L+G   +         V
Sbjct: 233 VKCMQCSXCSNKFDPFLDLSLDIV--KADSIYKAFKNFTTPELLDGGXRQYQCQQCKQKV 290

Query: 439 TAKKSVKIQTLSKILILHLMRF-SYGSQGSTKLHKSVRF 476
            A K   +     +L +HL RF SY  +   K+HK + F
Sbjct: 291 KALKQFTVHKAPYVLTIHLKRFQSYNLE--EKIHKKIHF 327


>gi|194209163|ref|XP_001917117.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Equus
           caballus]
          Length = 360

 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 140/326 (42%), Gaps = 61/326 (18%)

Query: 165 DGRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCS 224
           D R  NA+A    I G ++ P   INE           GL+N GN C+ N+ LQAL  C 
Sbjct: 4   DKRGTNASALEKDI-GPEQFP---INEHY--------FGLVNFGNTCYCNSVLQALYFCR 51

Query: 225 PFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFE 284
           PF + +   + +   K    T  A        D     +++KK + V+       P  F 
Sbjct: 52  PFRENVLAYKAQQKKKENLLTCLA--------DLFHSIATQKKKVGVI------PPKKFI 97

Query: 285 AVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSING--ANTALVSL 342
           + L+       N +     Q+DA EFL+++++ + D +L+ + +    NG   N  +   
Sbjct: 98  SRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-ILQEEKKQEKQNGKLKNGNMNET 151

Query: 343 AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHL 401
           AE          NK  +T         + +IF G L +  +       S+  + FL L +
Sbjct: 152 AE---------NNKPELT--------WVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSV 194

Query: 402 DIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLM 458
           D+  E   +I   LR FS  E L   + Y   +  +     A+K ++++ L  IL LHL 
Sbjct: 195 DV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ--EAQKRMRVKKLPMILALHLK 250

Query: 459 RFSYGSQ--GSTKLHKSVRFPLQLVL 482
           RF Y  Q    TKL   V FPL+L L
Sbjct: 251 RFKYMEQLHRYTKLSYRVVFPLELRL 276


>gi|327289850|ref|XP_003229637.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Anolis
           carolinensis]
          Length = 479

 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 129/286 (45%), Gaps = 43/286 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +  P+     LT      +   T    
Sbjct: 147 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQ--PRKKESLLTCLSDLFNSIAT---- 200

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
             +KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D L
Sbjct: 201 --QKKKVGVI------PPKKFISRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-L 246

Query: 323 LKLQGESTSINGA--NTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
           L+ + +    NG   N +L S +  DE E      K  +T         + +IF G L +
Sbjct: 247 LQEEKKQEKQNGKLQNGSLES-SGGDEGE------KGDLT--------WVHEIFQGTLTN 291

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVV 438
             +    +A S+  + FL L +D+  E   +I   LR FS  E L   Y+          
Sbjct: 292 ETRCLNCEAVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQ 349

Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 350 EAQKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 395


>gi|118367493|ref|XP_001016960.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
           thermophila]
 gi|89298727|gb|EAR96715.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
           thermophila SB210]
          Length = 1170

 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 133/307 (43%), Gaps = 56/307 (18%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL------QELRTRDIPKAGYPTLTAFVGFVSDF 256
           G+ N GN CF+N+ LQ L++  P +         QE+ T +   +      AF   V   
Sbjct: 75  GISNLGNTCFINSALQCLLNVQPLMDYFLSDLHNQEVNTNNPLGSKGKVTYAFADLV--- 131

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
                      N+      +   P +F   ++ F+     +I G   Q+D+QEFL F++D
Sbjct: 132 -----------NMIWCQNNKYIVPKVFLNTIQQFS-----AIFGDGSQQDSQEFLIFLLD 175

Query: 317 QMHD----ELLKLQGESTSINGANTALVSLAEE----------DEWETVGPKN-KSAVTR 361
            +H+     L KL   +TSI      L  + ++          D++ET   ++ K+ + R
Sbjct: 176 LLHEVKKQRLFKLIVSATSIFLYKKDLNRVKKKPAIEDKDYQSDQYETYAAESWKNYLLR 235

Query: 362 TQSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDI------YSEAVHTIEDA 414
            +S     + D+F GQLKS +K       S     F+ L + I       S+ + +IED 
Sbjct: 236 NKSI----VVDLFQGQLKSTLKCLVCETVSHKFDTFMYLSVPIPQQDKNQSKGIISIEDC 291

Query: 415 LRLFSAPENL---EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLH 471
           +  F+  E L   E +  +S       T K  + +     ILI+HL RFS+  +   K++
Sbjct: 292 IEEFTKEEKLDKSEWWLCTSCKKRTPSTKK--IDLWKTPNILIIHLKRFSFTKENRGKIN 349

Query: 472 KSVRFPL 478
           K + F +
Sbjct: 350 KFIDFKI 356


>gi|395737001|ref|XP_003776847.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 8-like [Pongo abelii]
          Length = 997

 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 86/195 (44%), Gaps = 11/195 (5%)

Query: 304 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ 363
           Q+D+QEFL F+MD +H++L K     T     N  L      +           A  + +
Sbjct: 735 QQDSQEFLLFLMDGLHEDLNKTDNRKTYKEENNDHLNYFKAAEH----------AXQKHK 784

Query: 364 SFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
               S +  +F GQ KS V+    +K S T + F+ L L I S +  T+ D LRLFS  E
Sbjct: 785 RLNESIIVVLFQGQFKSTVQCLTRHKKSRTFEAFMYLSLLIASTSNCTLXDCLRLFSKEE 844

Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 482
            L         +          +I  L  +L++HL  FSY  +   KL  SV FPL+ + 
Sbjct: 845 KLIDNNRFYCNHCRAQWDSXKEEIWKLPPVLLVHLKHFSYNGRWKQKLQTSVDFPLENLA 904

Query: 483 GRDLLVTPSAEVLQF 497
               ++ P   + ++
Sbjct: 905 LSQYVIGPKNNLKKY 919


>gi|432863250|ref|XP_004070044.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Oryzias
           latipes]
          Length = 508

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 129/312 (41%), Gaps = 50/312 (16%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL N GN CF+NA LQ+L +   F    +EL          P +    G  +        
Sbjct: 85  GLRNLGNTCFMNAILQSLSNIEQFSCYFKEL----------PAVALRSGKTAGRRMYHTR 134

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPD--------VPNSISGRPRQEDAQEFLSFI 314
           S    ++S+++  R    S+++     F+PD        +  S  G  +Q+DA EF+ ++
Sbjct: 135 SQGDNSVSLVEEFRKTLCSLWQGNQTAFSPDSLFYAIWKIMPSFRGY-QQQDAHEFMRYL 193

Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
           +D +H EL        S NGA+     ++ +D       + K          PS ++ IF
Sbjct: 194 LDHLHREL------QYSRNGASHP---VSPQDGVRLSSAEGKCCTNGA----PSVVTSIF 240

Query: 375 GGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRLFSAP 421
           GG L++ V        S    PFL L LDI S+               T+ D L  F+  
Sbjct: 241 GGLLQNEVNCLICGTESRKFDPFLDLSLDIPSQFRQKRSKDQEPSPTCTLRDCLYSFTDL 300

Query: 422 ENLEGYRTSSTGNAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
           E L+   T           +KS K   I  L K+L LHL RF + +    K+   V FPL
Sbjct: 301 EELD--ETELYYCHKCKKRQKSTKKFWIHNLPKVLCLHLKRFHWTAFLRNKIDTYVEFPL 358

Query: 479 QLVLGRDLLVTP 490
           + +  R  L+ P
Sbjct: 359 KGLDMRGYLLEP 370


>gi|334184421|ref|NP_001189593.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
 gi|227206324|dbj|BAH57217.1| AT2G24640 [Arabidopsis thaliana]
 gi|330252514|gb|AEC07608.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
          Length = 502

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 117/292 (40%), Gaps = 62/292 (21%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDFD 257
           + P GL N GN CF N  LQ L    P V  LL+    R+  +  +  L  F   +    
Sbjct: 1   MAPCGLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECRRNDWCFLCEFENHLD--- 57

Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
                   + N S      PFSP    + L N   ++     G  RQEDA E + F +D 
Sbjct: 58  --------RANYSRF----PFSPMNIISRLPNIGGNL-----GYGRQEDAHELMRFAIDM 100

Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEW--ETVGPKNKSAVTRTQSFLPSALSDIFG 375
           M    L                      DE+  E V P      T  Q         IFG
Sbjct: 101 MQSVCL----------------------DEFGGEKVVPPRAQETTLIQY--------IFG 130

Query: 376 GQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSS 431
           G L+S V+    +  S   +  + L ++I+ +AV ++E+ L  F+A E L+G   Y+   
Sbjct: 131 GLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAV-SLEECLDQFTAKEWLQGDNLYKCDR 189

Query: 432 TGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLG 483
             +   V A K + I+    IL + L RF  G  G  KL+K + FP    LG
Sbjct: 190 CDD--YVKACKRLSIRCAPNILTIALKRFQGGRFG--KLNKRISFPETFDLG 237


>gi|251765093|sp|C0HB46.1|UBP12_SALSA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
           Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
           thioesterase 12; AltName:
           Full=Ubiquitin-specific-processing protease 12
 gi|223649014|gb|ACN11265.1| Ubiquitin carboxyl-terminal hydrolase 12 [Salmo salar]
          Length = 372

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 141/335 (42%), Gaps = 58/335 (17%)

Query: 153 ISKFHVLCDGNIDGRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCF 212
           +SKF   C         NA+A    I GS++ P   +NE           GL+N GN C+
Sbjct: 7   VSKFASFCTMG-----ANASALEKEI-GSEQFP---VNEHY--------FGLVNFGNTCY 49

Query: 213 LNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVL 272
            N+ LQAL  C PF + +  L  R  P+     LT         D     +++K+ + V+
Sbjct: 50  CNSVLQALYFCRPFREKI--LAYRSQPRRKENLLTCLA------DLFHSIANQKRKVGVI 101

Query: 273 DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSI 332
                  P  F   L+       N +     Q+DA EFL+++++ + D LL+ + +    
Sbjct: 102 ------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-LLQEERKQDKT 149

Query: 333 NGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA-LSDIFGGQLKSVVKA-QGNKAS 390
           NG   A  SL  ++      P             PS  + +IF G L +  +       S
Sbjct: 150 NG-RLANGSLDSQNHNSNAPP-------------PSTWVHEIFQGTLTNETRCLTCETIS 195

Query: 391 ATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTL 449
           +  + FL L +D+  E   +I   LR FS  E L   Y+           A K ++++ L
Sbjct: 196 SKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKKL 253

Query: 450 SKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVL 482
             IL LHL RF Y    Q  TKL   V FPL+L L
Sbjct: 254 PMILALHLKRFKYMEQLQRYTKLSYRVVFPLELRL 288


>gi|348540585|ref|XP_003457768.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform 2
           [Oreochromis niloticus]
          Length = 372

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 123/284 (43%), Gaps = 39/284 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +  P+     LT         D  +  
Sbjct: 40  GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQ--PRRKESLLTCLA------DLFNSI 91

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D  
Sbjct: 92  ATQKKKVGVI------PPKKFISRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-- 138

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
             LQ E +     N  L       E E      ++ V            +IF G L +  
Sbjct: 139 -LLQEEKSQERQQNGKLGGGGGGGEGEGGKETQQTWV-----------HEIFQGTLTNET 186

Query: 383 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +    +A S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 187 RCLNCEAVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEA 244

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
           +K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 245 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 288


>gi|393907557|gb|EFO20320.2| ubiquitin carboxyl-terminal hydrolase 46 [Loa loa]
          Length = 406

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 127/290 (43%), Gaps = 28/290 (9%)

Query: 203 GLINSGNLCFLNATLQALMSCSPF----VQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 258
           GL+N GN C+ N+ +QAL  C PF    +Q  Q+L+     ++G             F  
Sbjct: 32  GLVNFGNTCYCNSVIQALYFCRPFREKILQYKQQLKKSYDKESGREKENLLTCLADLFHN 91

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
               +++KK +  +      +P  F   LK       N I     Q+DA EFL+++++ +
Sbjct: 92  I---ATQKKRVGTI------APKRFITKLKK-----ENGIFDNFSQQDAHEFLNYLLNTI 137

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA--LSDIFGG 376
            + L + +          T    +  +     + P    A  +  S    A  + +IF G
Sbjct: 138 SETLAEEKKIEKMEKILRTN--GMTRKGASVILPPCESLAFCQPSSSKSDATWIQEIFQG 195

Query: 377 QLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 435
            L +  +       S+  + FL L +D+   A  +I   LR+FS  E L+G +     N 
Sbjct: 196 TLTNETRCLNCETVSSKDEDFLDLSVDVEQNA--SITHCLRVFSDMETLQGEQKYYCENC 253

Query: 436 GVV-TAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL 482
                A+K ++I+ L ++L LHL RF Y  Q +  TKL   V FPL+L L
Sbjct: 254 CSKHEAQKRMRIKKLPQMLALHLKRFKYVEQMNRHTKLSYRVLFPLELRL 303


>gi|356518197|ref|XP_003527768.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
           max]
          Length = 734

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 124/286 (43%), Gaps = 56/286 (19%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPS 260
           P GL N GN CF N  LQ L    P +  L E         G    + +  F+ +F+T  
Sbjct: 169 PCGLKNCGNSCFANVVLQCLSFTRPLIAFLLEKGHH-----GECCHSDWC-FLCEFET-- 220

Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
               +K  +S     + FSP    + L    P++  ++ G  RQEDA EF+ F +D M  
Sbjct: 221 --HVEKVRLS----SQAFSPMNILSRL----PNISGTL-GYGRQEDAHEFIRFAIDAMQS 269

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                              V L E    + V PK++           + +  IFGG L+S
Sbjct: 270 -------------------VCLDEFGGEKVVPPKHQET---------TLIQHIFGGHLQS 301

Query: 381 -VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            V+  +  K S   +  + L+++I+ +A  ++E+ L  F+A E L G   Y+    G  G
Sbjct: 302 EVICTECEKNSNQYENMMDLNVEIHGDAA-SLEECLDQFTAKEWLHGDNMYKCD--GCKG 358

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 482
            V A K + ++    IL + L RF  G  G  KL+K V FP  L L
Sbjct: 359 YVKAWKRLTVKRAPNILTIALKRFQSGRFG--KLNKRVTFPETLDL 402


>gi|18400597|ref|NP_565576.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
 gi|75265927|sp|Q9SJA1.2|UBP19_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 19; AltName:
           Full=Deubiquitinating enzyme 19; Short=AtUBP19; AltName:
           Full=Ubiquitin thioesterase 19; AltName:
           Full=Ubiquitin-specific-processing protease 19
 gi|13430806|gb|AAK26025.1|AF360315_1 putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
           thaliana]
 gi|15810655|gb|AAL07252.1| putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
           thaliana]
 gi|20197976|gb|AAD23896.2| putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
           thaliana]
 gi|330252513|gb|AEC07607.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
          Length = 672

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 117/292 (40%), Gaps = 62/292 (21%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDFD 257
           + P GL N GN CF N  LQ L    P V  LL+    R+  +  +  L  F   +    
Sbjct: 171 MAPCGLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECRRNDWCFLCEFENHLD--- 227

Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
                   + N S      PFSP    + L N   ++     G  RQEDA E + F +D 
Sbjct: 228 --------RANYSRF----PFSPMNIISRLPNIGGNL-----GYGRQEDAHELMRFAIDM 270

Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEW--ETVGPKNKSAVTRTQSFLPSALSDIFG 375
           M    L                      DE+  E V P      T  Q         IFG
Sbjct: 271 MQSVCL----------------------DEFGGEKVVPPRAQETTLIQY--------IFG 300

Query: 376 GQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSS 431
           G L+S V+    +  S   +  + L ++I+ +AV ++E+ L  F+A E L+G   Y+   
Sbjct: 301 GLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAV-SLEECLDQFTAKEWLQGDNLYKCDR 359

Query: 432 TGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLG 483
             +   V A K + I+    IL + L RF  G  G  KL+K + FP    LG
Sbjct: 360 CDD--YVKACKRLSIRCAPNILTIALKRFQGGRFG--KLNKRISFPETFDLG 407


>gi|297690455|ref|XP_002822651.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Pongo abelii]
          Length = 566

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 122/284 (42%), Gaps = 34/284 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+         A    + +F     
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALMEEF----- 318

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
            +   + I         SPS F+  ++ + P           Q+DAQEFL F++D +H+E
Sbjct: 319 -AKLIQTIWTSSPSDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGLHNE 372

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
           + ++    T    +N        +DE      K +    +      S + D+F GQLKS 
Sbjct: 373 VNRV----TLRPKSNPENFDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQLKSS 422

Query: 382 VKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSSTGNA 435
           +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +     
Sbjct: 423 LTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCCRCR 480

Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
           G     K   IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 481 GRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 524


>gi|332019434|gb|EGI59918.1| Ubiquitin carboxyl-terminal hydrolase 46 [Acromyrmex echinatior]
          Length = 470

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 121/284 (42%), Gaps = 43/284 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + + E + R+  +     LT            S  
Sbjct: 140 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARN-KRTKETLLTCLADLFY-----SIA 193

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           + KKK  S+       +P  F A L+    +  N +     Q+DA EFL+F+++ +++  
Sbjct: 194 TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINE-- 239

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
                            + LAE  + +  G K  +         P+ + +IF G L S  
Sbjct: 240 -----------------IILAERTQSKPTGGKCGAGDAAGSPPEPTWVHEIFQGILTSET 282

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + F  L +D+      +I   LR FS  E L    +      +    A
Sbjct: 283 RCLNCETVSSKDEDFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFKCDHCSSYQEA 340

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL 482
           +K ++++ L  IL LHL RF Y  Q +   K+   V FPL+L L
Sbjct: 341 QKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRL 384


>gi|71405931|ref|XP_805544.1| ubiquitin hydrolase [Trypanosoma cruzi strain CL Brener]
 gi|70868994|gb|EAN83693.1| ubiquitin hydrolase, putative [Trypanosoma cruzi]
          Length = 438

 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 134/294 (45%), Gaps = 35/294 (11%)

Query: 202 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           RG++N+ N CF+NAT QAL+   PF QL     +  +     PTL     ++  +     
Sbjct: 80  RGILNNSNYCFMNATAQALVFLPPFAQLAI---SAVVEAELCPTLATLGKWMLSY----- 131

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR---PRQEDAQEFLSFIMDQM 318
             ++  N  V  +  P      +AV          S  G+     QEDA EF+  +++ +
Sbjct: 132 -WARAPNQLVPPLSLP------KAVRGQTASSAAPSHWGKMDGSSQEDATEFMHHLLEVI 184

Query: 319 HDELLKLQG-----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSD- 372
             EL  L+G      +  I   N +L   +E+  W  V  + + +V        S L D 
Sbjct: 185 QTELCALEGSYGDSSTGRIRDPNASLEGNSEKKGWTFVKGRERLSVREHCDKSRSVLLDA 244

Query: 373 IFGGQLKSVVKAQG---NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT 429
           +FGG +++ +K +    + AS  V+ F +L +D+   A  ++E AL       +L+  R 
Sbjct: 245 VFGGAVENHLKGKSKLKDHASVLVEGFFILQVDVGFSAECSLEMALE-----RSLQRERV 299

Query: 430 SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS-TKLHKSVRFPLQLVL 482
             +  A  +   K+VK++ L  +L+L L R++  ++G   KL   VRF   LVL
Sbjct: 300 YDSARAKDLL--KTVKLRRLPTVLLLQLQRWAVTAEGELVKLENLVRFSKTLVL 351


>gi|357463327|ref|XP_003601945.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
 gi|355490993|gb|AES72196.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
          Length = 366

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 130/294 (44%), Gaps = 48/294 (16%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFV-QLLQEL-RTRDIPKAGYPTLTAFVGFVSDFDTPS 260
           GL N GN C+ N+ LQAL  C PF  QLLQ   + ++I  A    LT      S      
Sbjct: 24  GLENFGNTCYCNSVLQALYFCVPFREQLLQYYGKNKNITDAEENLLTCLAELFSQI---- 79

Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
             SS+K+   V+      +P  F   LK       N +      +DA EFL+++++++ D
Sbjct: 80  --SSQKRKTGVI------APKRFVQRLKK-----QNELFRSYMHQDAHEFLNYLLNELVD 126

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETV--------GPKNKSAVTRTQSFLPSALSD 372
            +L+ +                AE+D+  T+        GPK+  A    ++ L + +  
Sbjct: 127 -ILEREAH--------------AEKDDQGTLLPSEKIANGPKSGLANGAKKAPLATWVHK 171

Query: 373 IFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY-RTS 430
            F G L +  +  Q    +A  + F  L LDI  E   +I   L+ FS+ E L    +  
Sbjct: 172 NFQGILTNETRCLQCETVTARDETFFDLSLDI--EQNSSITSCLKNFSSTETLNAEDKFF 229

Query: 431 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
                 +  A+K +KI+   ++L++HL RF Y  Q     KL   V FPL+L L
Sbjct: 230 CDKCCSLQEAQKRMKIKRPPRVLVIHLKRFKYMEQLGRYKKLSYRVVFPLELRL 283


>gi|158300486|ref|XP_320388.3| AGAP012139-PA [Anopheles gambiae str. PEST]
 gi|157013182|gb|EAA00200.3| AGAP012139-PA [Anopheles gambiae str. PEST]
          Length = 367

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 130/284 (45%), Gaps = 31/284 (10%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + + E + ++  +    TL + +      D     
Sbjct: 25  GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKN--RRTKETLLSCLA-----DLFYSI 77

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK +  +      +P  F A L+    +  N +     Q+DA EFL+F+++ +++ +
Sbjct: 78  ATQKKKVGSI------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 126

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L  + ++ +   AN         D    +   N  + + + +  P+ + +IF G L S  
Sbjct: 127 LAERNQAKAGGAANGP-------DLNGGLNGGNGGSSSNSGNTEPTWVHEIFQGILTSET 179

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN-AGVVTA 440
           +       S+  + F  L +D+  +   +I   LR FS  E L         N      A
Sbjct: 180 RCLNCETVSSKDENFFDLQVDV--DQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEA 237

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL 482
           +K ++++ L  IL LHL RF Y  Q +   K+   V FPL+L L
Sbjct: 238 QKRMRVKKLPMILALHLKRFKYMEQYNRHIKVSHRVVFPLELRL 281


>gi|167999895|ref|XP_001752652.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162696183|gb|EDQ82523.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 371

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 129/295 (43%), Gaps = 27/295 (9%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL N GN C+ N+ LQAL  C PF + L E   +  P A   +    +  +S+  T    
Sbjct: 24  GLENFGNTCYCNSVLQALYFCVPFREQLLEYCGQKKPVA--ESEENLLTCLSELFTQINS 81

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
             KK  +         +P  F   ++       N +      +DA EFL+F+++++ D L
Sbjct: 82  QKKKTGV--------IAPKRFVQRVRK-----QNELFRSYMHQDAHEFLNFLLNELVDIL 128

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           +K    + S +G++T+   +         G  N  A    +  + + +  IF G L +  
Sbjct: 129 VKEAQAANSNSGSHTSPEKVVGN------GATNGLANGNHKEPVVTWVHKIFQGTLTNET 182

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY-RTSSTGNAGVVTA 440
           +  +    +A  + FL L LDI  E   +I   LR FS+ E L    +        +  A
Sbjct: 183 RCLRCETITARDETFLDLSLDI--EQNSSITSCLRNFSSTETLNAEDKFFCDKCCSLQEA 240

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAE 493
           +K +KI++  +IL LHL RF Y  Q     KL   V FPL+L L       P +E
Sbjct: 241 QKRMKIKSPPRILALHLKRFKYIEQLGRYKKLSYRVVFPLELKLCNTTDDAPGSE 295


>gi|326924494|ref|XP_003208462.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Meleagris
           gallopavo]
          Length = 414

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 128/284 (45%), Gaps = 42/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +  P+     LT         D  +  
Sbjct: 85  GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQ--PRKKESLLTCLS------DLFNSI 136

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D L
Sbjct: 137 ATQKKKVGVI------PPKKFISRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-L 184

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG        +EE +        K+ +T         + +IF G L +  
Sbjct: 185 LQEEKKQEKQNGKLQNGSIESEEGD--------KTDLT--------WVHEIFQGTLTNET 228

Query: 383 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +    +A S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 229 RCLNCEAVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEA 286

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
           +K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 287 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 330


>gi|395326677|gb|EJF59084.1| cysteine proteinase [Dichomitus squalens LYAD-421 SS1]
          Length = 1201

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 125/300 (41%), Gaps = 49/300 (16%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLT------AFVGFVSDF 256
            GL N GN C++N+T+Q L +  PF +   + R +       P  T      AF   + D 
Sbjct: 845  GLKNLGNTCYMNSTIQCLSATVPFSRFFTDGRWKSAVNMVNPMGTKGVLALAFANILRDM 904

Query: 257  DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
                GG+               SP  F   + +  P    S      Q D+QEFLSF++D
Sbjct: 905  WQGEGGT--------------LSPVTFRRSICSHAPQFSGS-----EQHDSQEFLSFLLD 945

Query: 317  QMHDELLKL----QGESTSINGANTALV--SLAEEDEWETVGPKNKSAVTRTQSFLPSAL 370
             +H++L ++      EST    A    +   +A E EW+    ++ S +           
Sbjct: 946  GLHEDLNRILQKRNIESTPEREAELEKLPTQIASEQEWQIYRMRDDSLIV---------- 995

Query: 371  SDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVH--TIEDALRLFSAPENLEGY 427
             D F GQ ++ ++    +K S T   F+ L L I +      T++  +  F   E +E  
Sbjct: 996  -DFFQGQYRNRMECLTCHKTSTTYNTFMYLTLPIPTGRASKVTLQHCIDAFVKEEVMEKS 1054

Query: 428  RTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDL 486
               +  +   +  A K + +  L  +L++HL RFS     + K+   V FPL+   G DL
Sbjct: 1055 DAWNCPHCKALRKATKQLSLSRLPPVLLIHLKRFSAKGPFTDKIETFVEFPLK---GLDL 1111


>gi|268573334|ref|XP_002641644.1| Hypothetical protein CBG09971 [Caenorhabditis briggsae]
          Length = 415

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 131/301 (43%), Gaps = 48/301 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ +QAL  C PF + +   R + + K+G    T        F + +  
Sbjct: 28  GLVNFGNTCYCNSVIQALFFCRPFREKMLNYR-QTLKKSGTSKETLMTCLADLFHSIAN- 85

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
             +K+ +  +      +P  F   LK       N +     Q+DA EF +++++ + + L
Sbjct: 86  --QKRRVGTI------APKRFITKLKKENESFDNYV-----QQDAHEFFNYLLNSISEAL 132

Query: 323 L---KLQGESTSINGA------------NTALVSLAEEDEWETVGPKNKSAVTRTQSFLP 367
           +   K + E +S +G              TA +S  E +   T G  ++   T       
Sbjct: 133 ITDKKAEREKSSRHGTIKKGNVTVNMSPATAGISKDERERNGTEGSDSRPEST------- 185

Query: 368 SALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG 426
             + +IF G L +  K    +  S   + FL L +D+  E   +I   LR+FS  E L G
Sbjct: 186 -WIHEIFEGILTNETKCLSCDTKSCKDENFLDLSIDV--EQNTSITHCLRVFSETETLCG 242

Query: 427 ---YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY--GSQGSTKLHKSVRFPLQLV 481
              Y   +  +     A+K ++I+   ++L LHL RF Y       TKL   V FPL+L 
Sbjct: 243 DQKYYCETCSSKQ--EAQKRMRIKKPPQLLALHLKRFKYVDSLNRHTKLSYRVVFPLELR 300

Query: 482 L 482
           L
Sbjct: 301 L 301


>gi|322790247|gb|EFZ15246.1| hypothetical protein SINV_08745 [Solenopsis invicta]
          Length = 355

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 121/284 (42%), Gaps = 43/284 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + + E + R+  +     LT            S  
Sbjct: 25  GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARN-KRTKETLLTCLADLFY-----SIA 78

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           + KKK  S+       +P  F A L+    +  N +     Q+DA EFL+F+++ +++  
Sbjct: 79  TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINE-- 124

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
                            + LAE  + +  G K  +         P+ + +IF G L S  
Sbjct: 125 -----------------IILAERTQSKPTGGKCGAGDAAGSPPEPTWVHEIFQGILTSET 167

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + F  L +D+      +I   LR FS  E L    +      +    A
Sbjct: 168 RCLNCETVSSKDEDFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFKCDHCSSYQEA 225

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL 482
           +K ++++ L  IL LHL RF Y  Q +   K+   V FPL+L L
Sbjct: 226 QKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRL 269


>gi|312083170|ref|XP_003143749.1| ubiquitin carboxyl-terminal hydrolase 46 [Loa loa]
          Length = 389

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 125/295 (42%), Gaps = 55/295 (18%)

Query: 203 GLINSGNLCFLNATLQALMSCSPF----VQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 258
           GL+N GN C+ N+ +QAL  C PF    +Q  Q+L+     ++G             F  
Sbjct: 32  GLVNFGNTCYCNSVIQALYFCRPFREKILQYKQQLKKSYDKESGREKENLLTCLADLFHN 91

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
            +   ++KK + + D               NF+            Q+DA EFL+++++ +
Sbjct: 92  IA---TQKKRVGIFD---------------NFS------------QQDAHEFLNYLLNTI 121

Query: 319 HDELLKLQGESTSINGANT-------ALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 371
            + L + +          T       A V L   +      P +KS  T  Q        
Sbjct: 122 SETLAEEKKIEKMEKILRTNGMTRKGASVILPPCESLAFCQPSSKSDATWIQ-------- 173

Query: 372 DIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTS 430
           +IF G L +  +       S+  + FL L +D+   A  +I   LR+FS  E L+G +  
Sbjct: 174 EIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNA--SITHCLRVFSDMETLQGEQKY 231

Query: 431 STGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL 482
              N      A+K ++I+ L ++L LHL RF Y  Q +  TKL   V FPL+L L
Sbjct: 232 YCENCCSKHEAQKRMRIKKLPQMLALHLKRFKYVEQMNRHTKLSYRVLFPLELRL 286


>gi|432851662|ref|XP_004067022.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Oryzias
            latipes]
          Length = 1074

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 126/292 (43%), Gaps = 37/292 (12%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLLQ-ELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +     +         DI ++        +G   +F    G
Sbjct: 743  GLRNLGNTCYMNSILQCLCNTPAMAEYFNSNYYLEDINRSN------ILGHKGEFAEEFG 796

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  +  SP  F+  +      + +  +G   Q+D+QE L F+MD +H
Sbjct: 797  VIMK-----ALWAGLYKCISPRDFKITIGK----INDQFAGY-DQQDSQELLLFLMDGLH 846

Query: 320  DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
            ++L K   +       N  L      D           A ++ +    S +  +F GQ K
Sbjct: 847  EDLNKADNKKRYKEEENDHLDDQTAAD----------LAWSKHKLLNESIIVALFQGQFK 896

Query: 380  SVVK-AQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGV 437
            S V+ +  ++ S T + F+ L L + S +  +++D LRLFS  E L +  +         
Sbjct: 897  STVQCSTCHRKSRTFETFMYLSLPLASTSKCSLQDCLRLFSKEEKLTDNNKVFCRHCKAH 956

Query: 438  VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL------QLVLG 483
              + K ++I  +  IL++HL RFSY  +   KL  +V FPL      Q V+G
Sbjct: 957  RDSTKKLEIWKVPPILLVHLKRFSYEGRWKQKLQTTVDFPLDNLDLTQYVIG 1008


>gi|24643795|ref|NP_728456.1| CG14619, isoform B [Drosophila melanogaster]
 gi|22832694|gb|AAN09567.1| CG14619, isoform B [Drosophila melanogaster]
          Length = 337

 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 121/282 (42%), Gaps = 44/282 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELR-TRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ +Q L       + L+    +R +       L  F   + +  T + 
Sbjct: 13  GLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSLSTKDQQILHEFAKLIQEMWTANV 72

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
            +     ++ +++ R FS                + +     Q+DAQEFL F +D +H  
Sbjct: 73  HT-----VTPMELKRAFS--------------TKHRMYSDYNQQDAQEFLRFFLDSLHSA 113

Query: 322 LLK-LQGESTSI--NGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           L   ++GE+ +I  N ++     L    EW T   ++++++ R          D+F GQL
Sbjct: 114 LNSGVKGETLNIDDNLSDNKKADLTW--EWYT---RHENSLVR----------DLFVGQL 158

Query: 379 KSVVKAQ--GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 436
           KS +K    GN  S T  PF  L + + S +   +E  L LF   E L+G    +     
Sbjct: 159 KSTLKCTTCGN-TSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREEVLDGDEMPTCAKCK 217

Query: 437 V-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 477
                 KS  IQ   K L++HL RFS      +KL   V FP
Sbjct: 218 TRRKCTKSFTIQRFPKYLVIHLKRFS--ETRWSKLSNIVEFP 257


>gi|327285944|ref|XP_003227691.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Anolis
           carolinensis]
          Length = 1283

 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 122/300 (40%), Gaps = 62/300 (20%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CFLN+ LQ L    P    +L    ++   + G+  +      ++   + SG
Sbjct: 112 GLQNLGNTCFLNSALQCLTYTPPLANYMLSHEHSKTCHEQGFCMMCTMQSHITQALSNSG 171

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
              K   + + D+ R         + K+F             QEDA EFL + +D M   
Sbjct: 172 NVIKPMPV-INDLRR---------IAKHFRFG---------NQEDAHEFLRYTVDAMQKA 212

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
            L         NG+N                       T+  +F    +  IFGG L+S 
Sbjct: 213 CL---------NGSNKL------------------DRHTQATTF----IHQIFGGYLRSR 241

Query: 382 VKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGV 437
           VK    K  S T  P+L + L+I S    +I  AL  F  PE L+G   Y+ S      +
Sbjct: 242 VKCMNCKGVSDTFDPYLDITLEIKS--AQSINKALEQFVKPEQLDGENAYKCSKCKK--M 297

Query: 438 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQF 497
           V A K   +   S +L L L RF+  S G  K+ K V++P  L + R  +  P+ E + +
Sbjct: 298 VPASKRFTVHRASNVLTLSLKRFANFSGG--KITKEVKYPEYLDI-RPYMSQPNGEPIIY 354


>gi|302795107|ref|XP_002979317.1| hypothetical protein SELMODRAFT_153173 [Selaginella moellendorffii]
 gi|302813882|ref|XP_002988626.1| hypothetical protein SELMODRAFT_128261 [Selaginella moellendorffii]
 gi|300143733|gb|EFJ10422.1| hypothetical protein SELMODRAFT_128261 [Selaginella moellendorffii]
 gi|300153085|gb|EFJ19725.1| hypothetical protein SELMODRAFT_153173 [Selaginella moellendorffii]
          Length = 369

 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 133/309 (43%), Gaps = 35/309 (11%)

Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTA 248
           K++ D  P G     L N GN C+ N+ LQAL  C PF   L E  +R    +G P    
Sbjct: 10  KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFRDQLLEYYSR-TKSSGEPEENL 68

Query: 249 FVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQ 308
                   D  S  +S+KK   V+      +P  F   +K       N +      +DA 
Sbjct: 69  LTCLA---DLFSQINSQKKKTGVI------APKRFVQRVKK-----QNELFRSYMHQDAH 114

Query: 309 EFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPS 368
           EFL+F+++++ + L K      + +G     +  AE+ E    G  N +A  +      +
Sbjct: 115 EFLNFLLNELVETLEKEAKSGRTASGN----LKPAEKKE---NGVANGTAADQDHPL--T 165

Query: 369 ALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY 427
            +  IF G L +  +  +    +A  + FL L LDI  E   +I   LR FS+ E L   
Sbjct: 166 WVHKIFQGFLTNETRCLRCETITARDEKFLDLSLDI--EQNSSITSCLRNFSSTETLNAE 223

Query: 428 -RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGR 484
            +        +  A+K +KI+T  +IL LHL RF Y  Q     KL   V FPL+L L  
Sbjct: 224 DKFFCDKCCSLQEAQKRMKIKTPPRILALHLKRFKYIEQLGRYKKLSYRVVFPLELKLCN 283

Query: 485 DLLVTPSAE 493
                P +E
Sbjct: 284 TTDDAPGSE 292


>gi|224043232|ref|XP_002192348.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Taeniopygia
           guttata]
          Length = 358

 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 124/286 (43%), Gaps = 46/286 (16%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF   +  L  +  P+     LT         D     
Sbjct: 29  GLVNFGNTCYCNSVLQALYFCRPFRDKV--LAYKSQPRKKENLLTCLA------DLFHSI 80

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 81  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 128

Query: 323 LKLQGESTSINGA--NTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
           L+ + +    NG   N ++ S       E+  P +           P+ + +IF G L +
Sbjct: 129 LQEERKQEKQNGRLPNGSVDS-------ESSSPPD-----------PTWVHEIFQGTLTN 170

Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVV 438
             +       S+  + FL L +D+  E   +I   LR FS  E L   Y+          
Sbjct: 171 ETRCLTCETVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQ 228

Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            A K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 229 EAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 274


>gi|213510860|ref|NP_001133405.1| ubiquitin carboxyl-terminal hydrolase 12 [Salmo salar]
 gi|209153653|gb|ACI33173.1| Ubiquitin carboxyl-terminal hydrolase 12 [Salmo salar]
          Length = 372

 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 141/335 (42%), Gaps = 58/335 (17%)

Query: 153 ISKFHVLCDGNIDGRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCF 212
           +SKF   C         NA+A    I GS++ P   +NE           GL+N GN C+
Sbjct: 7   VSKFASFCTMG-----ANASALEKEI-GSEQFP---VNEHY--------FGLVNFGNTCY 49

Query: 213 LNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVL 272
            N+ LQAL  C PF + +  L  R  P+     LT         D     +++K+ + V+
Sbjct: 50  CNSVLQALYFCRPFREKI--LAYRSQPRRKENLLTCLA------DLFHSIANQKRKVGVI 101

Query: 273 DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSI 332
                  P  F   L+       N +     Q+DA EFL+++++ + D LL+ + +    
Sbjct: 102 ------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-LLQEERKQDKT 149

Query: 333 NGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA-LSDIFGGQLKSVVKA-QGNKAS 390
           NG   A  SL  ++      P             PS  + +IF G L +  +       S
Sbjct: 150 NG-RLANGSLDSQNNNSNAPP-------------PSTWVHEIFQGTLTNETRCLTCETIS 195

Query: 391 ATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTL 449
           +  + FL L +D+  E   +I   LR FS  E L   Y+           A K ++++ L
Sbjct: 196 SKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKKL 253

Query: 450 SKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVL 482
             IL LHL RF Y    Q  TKL   V FPL+L L
Sbjct: 254 PMILALHLKRFKYMEQLQRYTKLSYRVVFPLELRL 288


>gi|11414862|dbj|BAB18534.1| deubiquitinating enzyme UBPY [Mus musculus]
          Length = 1080

 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 118/282 (41%), Gaps = 31/282 (10%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++N+ LQ L +         +     DI ++        +G   +     G
Sbjct: 740 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 793

Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
              K      L  G  R  SP  F+  +         S      Q+D+QE L  +MD +H
Sbjct: 794 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLSLMDGLH 843

Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
           ++L K           N  L         E  G   ++ + + +    S +  +F GQ K
Sbjct: 844 EDLNKADNRKRHKEENNEHLD--------EPAG--GRARLQKHKQLNESIIRLLFQGQFK 893

Query: 380 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGV 437
           + V+     + S T + F+ L L + S +  T++D LRLFS  E L +  R   +     
Sbjct: 894 ATVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRAR 953

Query: 438 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
             + K ++I  L  +L++HL RFSY  +   KL  SV FPL+
Sbjct: 954 RDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLE 995


>gi|340377167|ref|XP_003387101.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like
           [Amphimedon queenslandica]
          Length = 636

 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 133/306 (43%), Gaps = 63/306 (20%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL----------QELRTRDIPKAGYPTLT-AFVG 251
           GL NSGN C++N+ LQ L       +            +  RT    KA   +L  A+  
Sbjct: 293 GLYNSGNTCYMNSVLQCLSHTRQMTEFFLSGDAKAEAAEATRT----KARRSSLVNAYTE 348

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 311
           F+     P                +  +P+   + + +  P V  S      Q+DAQEFL
Sbjct: 349 FLEQMWKPKDD-------------KAVTPNHLRSAMSSLIPMVRTS-----EQQDAQEFL 390

Query: 312 SFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 371
            F++  +H+E  K +    S   +++  ++ +E           +S+  R+ S+  S LS
Sbjct: 391 QFLLCCLHEETNKPKKRLESSESSSSTNLTPSELA---------RSSWKRSLSYDNSYLS 441

Query: 372 DIFGGQLKSVVKAQGNK-ASATVQPFLLLHLDIYSEAVH-------TIEDALRLFSAPEN 423
           D+F GQ++S +     +  S + + F  L L + S++         TI D  +L+SA E 
Sbjct: 442 DLFMGQVRSTLTCTTCRNTSLSFESFWSLSLPLPSKSKSHSSSLFITISDCFQLYSAEER 501

Query: 424 LEGYRTSSTGNAGVVTAKKS-------VKIQTLSKILILHLMRFSYGSQGSTKLHKSVRF 476
           L+      + N  V T  KS       + IQ   KILILHL RF+  ++  TKL  +V+ 
Sbjct: 502 LD------SDNQPVCTKCKSSQPSTKKLDIQIFPKILILHLKRFTVRNRYCTKLPSNVKV 555

Query: 477 PLQLVL 482
           P  + +
Sbjct: 556 PTTVTV 561


>gi|449273422|gb|EMC82916.1| Ubiquitin carboxyl-terminal hydrolase 46, partial [Columba livia]
          Length = 347

 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 127/286 (44%), Gaps = 52/286 (18%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  A        D     
Sbjct: 24  GLVNFGNTCYCNSVLQALYFCRPFRENVLSYKAQQKKKENLLTCLA--------DLFHSI 75

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D  
Sbjct: 76  ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-- 122

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
             ++ ++  +   N   ++ AEE+        NK  +T         + +IF G L +  
Sbjct: 123 --MEKQNGKLKNGN---MNEAEEN--------NKQELT--------WVHEIFQGTLTNET 161

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGVV 438
           +       S+  + FL L +D+  E   +I   LR FS  E L   + Y   +  +    
Sbjct: 162 RCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ-- 217

Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 218 EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 263


>gi|134133230|ref|NP_001077025.1| ubiquitin carboxyl-terminal hydrolase 12A [Danio rerio]
 gi|251765092|sp|A4FUN7.1|UBP12_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12A; AltName:
           Full=Deubiquitinating enzyme 12A; AltName:
           Full=Ubiquitin thioesterase 12A; AltName:
           Full=Ubiquitin-specific-processing protease 12A
 gi|133778337|gb|AAI15287.1| Usp12 protein [Danio rerio]
          Length = 371

 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 141/336 (41%), Gaps = 61/336 (18%)

Query: 153 ISKFHVLCDGNIDGRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCF 212
           +SKF   C         NA+A    I GS++ P   +NE           GL+N GN C+
Sbjct: 7   VSKFASFCTMG-----ANASALEKEI-GSEQFP---VNEHY--------FGLVNFGNTCY 49

Query: 213 LNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVL 272
            N+ LQAL  C PF + +  L  R  P+     LT         D     +++K+ + V+
Sbjct: 50  CNSVLQALYFCRPFREKI--LAYRSQPRRKENLLTCLA------DLFHSIANQKRKVGVI 101

Query: 273 DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSI 332
                  P  F   L+       N +     Q+DA EFL+++++ + D LL+ + +    
Sbjct: 102 ------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-LLQEERKQDKQ 149

Query: 333 NG--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKA 389
           NG  AN  L S             N S    T     + + +IF G L +  +       
Sbjct: 150 NGKLANGTLDS-----------QNNNSTPPST-----TWVHEIFQGTLTNETRCLTCETI 193

Query: 390 SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQT 448
           S+  + FL L +D+  E   +I   LR FS  E L   Y+           A K ++++ 
Sbjct: 194 SSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKK 251

Query: 449 LSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVL 482
           L  IL LHL RF Y    Q  TKL   V FPL+L L
Sbjct: 252 LPMILALHLKRFKYMEQLQRYTKLSYRVVFPLELRL 287


>gi|407410969|gb|EKF33213.1| ubiquitin hydrolase [Trypanosoma cruzi marinkellei]
          Length = 438

 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 143/317 (45%), Gaps = 35/317 (11%)

Query: 176 SSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRT 235
           SS+   K     A N P         RG++N+ N CF+NAT QAL+   PF QL     +
Sbjct: 60  SSVGRQKSTFATAFNPPP------FARGILNNSNHCFMNATAQALVFLPPFAQLAI---S 110

Query: 236 RDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVP 295
             +     PTL     ++  +       + K+ +  L + +    +M      +  P   
Sbjct: 111 AVVEAELCPTLATLGRWMLSY----WAKAPKQLVPPLSLPK----AMRGQSASSAAPSHW 162

Query: 296 NSISGRPRQEDAQEFLSFIMDQMHDELLKLQGE--STSINGA---NTALVSLAEEDEWET 350
             + G   QEDA EF+  +++ +  EL  L+G    TS   +   NT+L   +E   W  
Sbjct: 163 GKMDGSS-QEDATEFMHHLLEVIQTELCALEGSYGETSTGRSRDPNTSLEGNSETKGWTF 221

Query: 351 VGPKNKSAVTRTQSFLPSALSD-IFGGQLKSVVKAQG---NKASATVQPFLLLHLDIYSE 406
           V  + + +V        S L D +FGG +++ +K +    + AS  V+ F LL +D+   
Sbjct: 222 VKGRERLSVREHCDKSRSVLLDAVFGGAVENHLKGKSKLKDHASVLVEGFFLLQVDVGFS 281

Query: 407 AVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG 466
           A  ++E AL       +L+  R   +  A  +   K+VK++ L  +L+L L R++  ++G
Sbjct: 282 AECSLEMALE-----RSLQRERVYDSARAKDLL--KTVKLRRLPTVLLLQLQRWAVTAEG 334

Query: 467 S-TKLHKSVRFPLQLVL 482
              KL   VRF   LVL
Sbjct: 335 ELVKLENLVRFSKTLVL 351


>gi|449453974|ref|XP_004144731.1| PREDICTED: uncharacterized protein LOC101219654 [Cucumis sativus]
          Length = 933

 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 112/279 (40%), Gaps = 58/279 (20%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CFLN+ LQ L    P    LQ  + ++    AG+  L A    VS       
Sbjct: 102 GLQNLGNTCFLNSVLQCLTYTEPLAAYLQSGKHQNSCHVAGFCALCAIQKHVSR------ 155

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
                   ++   GR  +P    + L+  + +  N+     RQEDA E++  +++ MH  
Sbjct: 156 --------ALQSSGRILAPKDLVSNLRCISRNFRNA-----RQEDAHEYMVNLLESMHKC 202

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
            L L   S S +    +LV                                IFGG+L+S 
Sbjct: 203 CLPLGLPSESPSAYEKSLV------------------------------HKIFGGRLRSQ 232

Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG--YRTSSTGNAGVV 438
           VK  Q +  S    PFL L LDI      +I  A + F+ PE L+G   +         V
Sbjct: 233 VKCMQCSFCSNKFDPFLDLSLDIV--KADSIYKAFKNFTTPELLDGGERQYQCQQCKQKV 290

Query: 439 TAKKSVKIQTLSKILILHLMRF-SYGSQGSTKLHKSVRF 476
            A K   +     +L +HL RF SY  +   K+HK + F
Sbjct: 291 KALKQFTVHKAPYVLTIHLKRFQSYNLE--EKIHKKIHF 327


>gi|302765142|ref|XP_002965992.1| hypothetical protein SELMODRAFT_1903 [Selaginella moellendorffii]
 gi|300166806|gb|EFJ33412.1| hypothetical protein SELMODRAFT_1903 [Selaginella moellendorffii]
          Length = 309

 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 116/299 (38%), Gaps = 73/299 (24%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA-GYPTLTAFVGFVSDFDTPSG 261
           GL N GN CFLN+ LQ L    P  + L+  + + + K+ G+  + A  G V +     G
Sbjct: 3   GLTNLGNTCFLNSVLQCLTYTQPLAEFLKSGQHKLLCKSSGFCAMCALEGHVKNALQSWG 62

Query: 262 G------SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
                     + N S   I R F P                      RQEDA EFL ++M
Sbjct: 63  KVIAPNHMISRVNYSNAGISRAFQPW---------------------RQEDAHEFLRYLM 101

Query: 316 DQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
           + +  + L           + T + S  +E                      + L  IFG
Sbjct: 102 EALQKDCLP----------SKTPMNSPEQE---------------------KTLLYKIFG 130

Query: 376 GQLKSVVKAQGN-KASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSS 431
           G+L+S VK     + S TV PFL L LDI      ++  AL  F+A E L+G   Y    
Sbjct: 131 GRLRSQVKCSNCLERSETVDPFLDLSLDI--TRADSLGKALAWFTANEILDGDNKYHCEK 188

Query: 432 TGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP 490
                 V A K   I+T   +L +   RFS       K+ K V F      GR L +TP
Sbjct: 189 CKKK--VRAIKRFTIETAPNVLTVQFKRFSSTGLHGQKIDKKVHF------GRKLDITP 239


>gi|268569258|ref|XP_002640473.1| Hypothetical protein CBG13606 [Caenorhabditis briggsae]
          Length = 538

 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 131/332 (39%), Gaps = 81/332 (24%)

Query: 176 SSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRT 235
           +S S S E+P +             PRGL N GN CF+NA LQAL     F + +  L  
Sbjct: 208 ASSSSSTEIPYR-------------PRGLRNLGNTCFMNAVLQALACIKDFREYILNL-- 252

Query: 236 RDIPKAGYPTLTAFV----------GFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEA 285
                   P+L  +V           F++D       S   +N        P SP+ F  
Sbjct: 253 --------PSLEDYVEDEKIAQNGNCFLTDEYQKLLASMSARNFR-----DPTSPNEFRE 299

Query: 286 VLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEE 345
              +  P          RQ D+ EFL +++DQMH E+ K +              +L E 
Sbjct: 300 AFVSACPRFRGF-----RQHDSHEFLRYLLDQMHTEMRKCR--------------NLPE- 339

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNK-ASATVQPFLLLHLDI- 403
                  P +K+          + +S  F G L+S V  Q  +  S  +  F+ L LD+ 
Sbjct: 340 ------MPDDKT----------TPISKSFEGTLQSSVICQTCRNVSNKMDDFMDLSLDVP 383

Query: 404 -YSEAVHTIEDALRLFSAPENLE-GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 461
             S+A + + D L LF   E LE G +   +      T  K + I+ L ++L LH+ RF 
Sbjct: 384 RVSKARYRLSDCLDLFFQRELLEKGEKPECSKCKSKQTCSKQMFIKKLPEVLCLHIKRF- 442

Query: 462 YGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 493
                  K+   + FPL  +   D L   S E
Sbjct: 443 --RDNGGKIDTLIEFPLTGLSVDDFLTEDSDE 472


>gi|195568052|ref|XP_002107569.1| GD17542 [Drosophila simulans]
 gi|194204979|gb|EDX18555.1| GD17542 [Drosophila simulans]
          Length = 398

 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 120/282 (42%), Gaps = 44/282 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELR-TRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ +Q L       + L+    +R +       L  F   + +  T   
Sbjct: 74  GLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSLSTKDQQILHEFAKLIHEMWT--- 130

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
             S    ++ +++ R FS                + +     Q+DAQEFL F +D +H  
Sbjct: 131 --SNVHTVTPMELKRAFS--------------TKHRMYSDYNQQDAQEFLRFFLDSLHSA 174

Query: 322 LLK-LQGESTSI--NGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           L   ++GE+ +I  N ++     L    EW T   ++++++ R          D+F GQL
Sbjct: 175 LNSGVKGETLNIDDNLSDNKKADLTW--EWYT---RHENSLVR----------DLFVGQL 219

Query: 379 KSVVKAQ--GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 436
           KS +K    GN  S T  PF  L + + S +   ++  L LF   E L+G    +     
Sbjct: 220 KSTLKCTTCGN-TSVTFDPFWDLSVPLPSSSRCKLDACLDLFIREEVLDGDEMPTCAKCK 278

Query: 437 V-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 477
                 KS  IQ   K L++HL RFS      +KL   V FP
Sbjct: 279 TRRKCTKSFTIQRFPKYLVIHLKRFS--ETRWSKLSNIVEFP 318


>gi|195113703|ref|XP_002001407.1| GI21992 [Drosophila mojavensis]
 gi|193918001|gb|EDW16868.1| GI21992 [Drosophila mojavensis]
          Length = 361

 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 126/285 (44%), Gaps = 40/285 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFVGFVSDFDTPSG 261
           GL+N GN C+ N+ LQAL  C PF + + E + ++  PK    +  A + +       S 
Sbjct: 25  GLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKRPKETLLSCLADLFY-------SI 77

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
            + KKK  S+       +P  F   L+    +  N +     Q+DA EFL+F+++ +++ 
Sbjct: 78  ATQKKKVGSI-------APKKFITRLRKEKEEFDNYM-----QQDAHEFLNFLINHINEI 125

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
           +L  +    +    ++A           T  P  ++    T+   P+ + +IF G L S 
Sbjct: 126 ILAERNSGKTPAAGSSA-----------TTTPIGQTNGANTE---PTWVHEIFQGILTSE 171

Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN-AGVVT 439
            +       S+  + F  L +D+      +I   LR FS  E L         N      
Sbjct: 172 TRCLNCETVSSKDENFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFKCDNCCSYQE 229

Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL 482
           A+K ++++ L  IL LHL RF Y  Q +   K+   V FPL+L L
Sbjct: 230 AQKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPLELRL 274


>gi|410947218|ref|XP_003980349.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Felis catus]
          Length = 440

 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 133/321 (41%), Gaps = 53/321 (16%)

Query: 166 GRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSP 225
           GR  NA+A    I G ++ P   +NE           GL+N GN C+ N+ LQAL  C P
Sbjct: 85  GRGANASALEKEI-GPEQFP---VNEHY--------FGLVNFGNTCYCNSVLQALYFCRP 132

Query: 226 FVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEA 285
           F +  + L  +  P+     LT          T      +KK + V+       P  F  
Sbjct: 133 FRE--KVLAYKSQPRKKENLLTCLADLFHSIAT------QKKKVGVI------PPKKFIT 178

Query: 286 VLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEE 345
            L+       N +     Q+DA EFL+++++ + D +L+ + +    NG     +     
Sbjct: 179 RLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-ILQEERKQEKQNGR----LPNGNI 228

Query: 346 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIY 404
           D      P +           P+ + +IF G L +  +       S+  + FL L +D+ 
Sbjct: 229 DSENNSSPPD-----------PTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDV- 276

Query: 405 SEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG 463
            E   +I   LR FS  E L   Y+           A K +K++ L  IL LHL RF Y 
Sbjct: 277 -EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYM 335

Query: 464 SQ--GSTKLHKSVRFPLQLVL 482
            Q    TKL   V FPL+L L
Sbjct: 336 DQLHRYTKLSYRVVFPLELRL 356


>gi|355692712|gb|EHH27315.1| hypothetical protein EGK_17486, partial [Macaca mulatta]
          Length = 343

 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 118/291 (40%), Gaps = 54/291 (18%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTL---------TAFVGF 252
           GL N GN C++NA LQ L S SP V+  L         K  YP L         TAF   
Sbjct: 45  GLRNLGNTCYMNAILQCLCSISPLVEYFLSGKNLCSFQKETYPFLLPSDCSEVATAFAYL 104

Query: 253 VSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
           ++D                L      SP +F + L N  P        +  Q+DAQEFL 
Sbjct: 105 MTDM--------------WLGDSDCVSPEIFRSALGNLYPAF-----TKKTQQDAQEFLI 145

Query: 313 FIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSD 372
           ++++++H+ L K        +   +A        +W T         T T     S ++ 
Sbjct: 146 YVLNELHEALKKYHYPRRRSHEKGSAQRCCR---KWIT---------TET-----SVITQ 188

Query: 373 IFGGQLK-SVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSS 431
           +F GQL  S+V  +  K +   + F +L L I SE   +++D L+ F   + L     ++
Sbjct: 189 LFEGQLNYSIVCLKCEKCTYKNEVFTVLSLPIPSEYECSLQDCLQCFFQQDTLTW---NN 245

Query: 432 TGNAGVVTAKKSVKIQT----LSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
             +      K+   ++       KI+I HL RF    +   KL   + +PL
Sbjct: 246 QIHCSFCETKQETAVRAGISKAPKIIIFHLKRFDIQGKTKRKLRTDIHYPL 296


>gi|148673864|gb|EDL05811.1| ubiquitin specific peptidase 12 [Mus musculus]
          Length = 355

 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 123/284 (43%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +  L  +  P+     LT         D     
Sbjct: 25  GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLA------DLFHSI 76

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 77  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 124

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG    L +   ++E     P             P+ + +IF G L +  
Sbjct: 125 LQEERKQEKQNG---RLRNGDVDNEDNNSTPD------------PTWVHEIFQGTLTNET 169

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 170 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 227

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 228 HKRMKVKKLPLILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 271


>gi|157873881|ref|XP_001685441.1| putative ubiquitin hydrolase [Leishmania major strain Friedlin]
 gi|68128513|emb|CAJ08645.1| putative ubiquitin hydrolase [Leishmania major strain Friedlin]
          Length = 409

 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 138/339 (40%), Gaps = 86/339 (25%)

Query: 205 INSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSS 264
           +N+ N CF+N+ LQALM    F QL   +      +   PTL     +   +  P  G +
Sbjct: 1   MNNSNFCFMNSMLQALMFIPSFAQLTVSVSCDAQARQLCPTLVTLGKWTLQYWKP--GFT 58

Query: 265 KKKNISVLDIGRPFSPSMFEAVLKNFTPDVP----NSISGRPR---------------QE 305
           +   I         +P++         P VP    NS SG PR               QE
Sbjct: 59  RLAMI---------APTLM--------PRVPAGANNSNSGAPRSAVVPASQRILDGSVQE 101

Query: 306 DAQEFLSFIMDQMHDELLKLQ------------------------GESTSINGANT---- 337
           DAQEFL  +++++H+EL+ L+                          ST+  G  T    
Sbjct: 102 DAQEFLQKLLERVHEELVGLEEAFQQADASEAATESEMGSIGPAATASTASGGGRTDAPD 161

Query: 338 -ALVSLAEEDEWETVGPKNKSAV-----TRTQSFLPSALSDIFGGQLKSVVKA---QGNK 388
            A  S   +  W  V  K K AV     TR QS L   LS IFGG L+S ++    Q N+
Sbjct: 162 DATTSTFPKKGWTFVKGKEKLAVREHEDTRGQSKL---LSSIFGGTLESHLQGKQRQRNR 218

Query: 389 ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQT 448
            S  ++ +  L +D+      T+E AL      E +  Y +    N      KK++++  
Sbjct: 219 VSVLIERYYCLPVDVGFAPECTVEQALERTFMTERI--YDSEHEKN-----LKKTLRLGH 271

Query: 449 LSKILILHLMRFSYGSQGS-TKLHKSVRFPLQLVLGRDL 486
           L  IL L L R++   +G   KL   VR    L++ R +
Sbjct: 272 LPSILFLQLRRWAVTREGELVKLDNVVRVTRTLLIPRTI 310


>gi|198470304|ref|XP_001355290.2| GA13118 [Drosophila pseudoobscura pseudoobscura]
 gi|198145386|gb|EAL32347.2| GA13118 [Drosophila pseudoobscura pseudoobscura]
          Length = 872

 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 123/291 (42%), Gaps = 47/291 (16%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELR-TRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ +Q L   +   + L+    +R         L  F   + +  T   
Sbjct: 548 GLRNIGNTCFMNSVIQCLSHTTELTRFLRTHHGSRSSATKDQLILFEFAKLIQEMWT--- 604

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
             S    ++ +D+ R FS                + +     Q+DAQEFL F +D +H  
Sbjct: 605 --SSVHTVTPMDLKRAFS--------------AKHRMYSDYNQQDAQEFLRFFLDSLHSA 648

Query: 322 LLK-LQGESTSI--NGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           L   ++GE+ +I  N ++     L    EW T   ++++++ R          D+F GQL
Sbjct: 649 LNSGIKGETLNIDDNLSDNKKADLTW--EWYT---RHENSLVR----------DLFVGQL 693

Query: 379 KSVVKAQ--GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 436
           KS +K    GN  S T  PF  L + + S +   +E  L LF   E L+G    +     
Sbjct: 694 KSTLKCTTCGN-TSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREEILDGDEMPTCSKCK 752

Query: 437 V-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDL 486
                 KS  IQ   K L++HL RFS      +KL   V FP      RDL
Sbjct: 753 TRRKCTKSFTIQRFPKYLVIHLKRFS--ETRWSKLSNIVEFP---TADRDL 798


>gi|405963602|gb|EKC29164.1| Ubiquitin carboxyl-terminal hydrolase 46 [Crassostrea gigas]
          Length = 1411

 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 122/288 (42%), Gaps = 54/288 (18%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
            GL+N GN C+ N+ LQAL  C PF   + + +           LT         D     
Sbjct: 1084 GLVNFGNTCYCNSVLQALYFCRPFRDRVLQFKQLQKNNKKESLLTCLA------DLFYSI 1137

Query: 263  SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
            +S+KK +  +      +P  F   L+       N +     Q+DA EFL+++++++  EL
Sbjct: 1138 ASQKKKVGTI------APKKFITRLRKEYDLFDNFM-----QQDAHEFLNYLLNRV-SEL 1185

Query: 323  LKL--QGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
            L+   QG    INGA                  +NK+         P+ + D+F G   +
Sbjct: 1186 LQAEKQGNKGKINGAEN----------------QNKTE--------PTWVEDLFQGTFTN 1221

Query: 381  VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 436
              +       S+  + FL L +D+  E   +I   LR FS+ E L     Y     G   
Sbjct: 1222 ETRCLTCETVSSKDEDFLDLSVDV--EQNTSITHCLRGFSSMETLSDEHKYYCEVCGTKQ 1279

Query: 437  VVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL 482
               A+K ++++ L KIL LHL RF Y  Q +  TKL   V F  +L L
Sbjct: 1280 --EAQKRMRVKKLPKILALHLKRFKYMEQLNRFTKLSHRVLFTFELRL 1325


>gi|302815104|ref|XP_002989234.1| hypothetical protein SELMODRAFT_1651 [Selaginella moellendorffii]
 gi|300142977|gb|EFJ09672.1| hypothetical protein SELMODRAFT_1651 [Selaginella moellendorffii]
          Length = 309

 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 116/299 (38%), Gaps = 73/299 (24%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA-GYPTLTAFVGFVSDFDTPSG 261
           GL N GN CFLN+ LQ L    P  + L+  + + + K+ G+  + A  G V +     G
Sbjct: 3   GLTNLGNTCFLNSVLQCLTYTQPLAEFLKSGQHKLLCKSSGFCAMCALEGHVRNALQSWG 62

Query: 262 G------SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
                     + N S   I R F P                      RQEDA EFL ++M
Sbjct: 63  KVIAPNHMISRVNYSNAGISRAFQPW---------------------RQEDAHEFLRYLM 101

Query: 316 DQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
           + +  + L           + T + S  +E                      + L  IFG
Sbjct: 102 EALQKDCLP----------SKTPMNSPEQE---------------------KTLLYKIFG 130

Query: 376 GQLKSVVKAQGN-KASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSS 431
           G+L+S VK     + S TV PFL L LDI      ++  AL  F+A E L+G   Y    
Sbjct: 131 GRLRSQVKCSNCLERSETVDPFLDLSLDI--TRADSLGKALAWFTANEILDGDNKYHCEK 188

Query: 432 TGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP 490
                 V A K   I+T   +L +   RFS       K+ K V F      GR L +TP
Sbjct: 189 CKKK--VRAIKRFTIETAPNVLTVQFKRFSSTGLHGQKIDKKVHF------GRKLDITP 239


>gi|303272151|ref|XP_003055437.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226463411|gb|EEH60689.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 364

 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 85/335 (25%), Positives = 133/335 (39%), Gaps = 89/335 (26%)

Query: 202 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           RGL N GN CFLN+ +Q L    PF                         F+S+   P+ 
Sbjct: 9   RGLQNLGNTCFLNSCVQCLAHAPPFSDY----------------------FLSE---PAY 43

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR------PR------------ 303
              +KK I         +P+M EAV+K      P+  S R      PR            
Sbjct: 44  PRRRKKTI--------LAPAM-EAVVKAIHDANPSVASARRVAAHNPRGLLRAMDDVPPL 94

Query: 304 -------QEDAQEFLSFIMDQMHDELLKLQGESTSINGAN--TALVSLAEEDEWETVGPK 354
                  Q D+QEFL  +++ ++DEL  ++         +  T   ++  +  W     +
Sbjct: 95  DLFTDRDQHDSQEFLRMLLENLNDELNVVEKPPPYREEKDDFTEPENVKADRLWAQYVAR 154

Query: 355 NKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIE- 412
             S +TRT           F GQL+S V+  +    S +  PF  L L + +    ++  
Sbjct: 155 CDSVMTRT-----------FAGQLRSSVECHKCGTCSTSYDPFWDLSLPLRASKKGSVGG 203

Query: 413 -----------DALRLFSAPENLEGYRTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRF 460
                      D LR F+  E LEG  T +     V  +A K ++++   ++L++HL RF
Sbjct: 204 GGGGAGPIGVIDCLRAFTEDETLEGSDTRTCPKCKVKGSATKRLRVKRWPRVLVIHLKRF 263

Query: 461 SYGSQGS--TKLHKSVRFPLQLVLGRDLLVTPSAE 493
           ++G  G    K+  +V  P  L LG D L   + E
Sbjct: 264 TWGKSGRPGKKMDAAVDVPYDLSLG-DFLADDALE 297


>gi|195169026|ref|XP_002025329.1| GL13296 [Drosophila persimilis]
 gi|194108785|gb|EDW30828.1| GL13296 [Drosophila persimilis]
          Length = 820

 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 123/291 (42%), Gaps = 47/291 (16%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELR-TRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ +Q L   +   + L+    +R         L  F   + +  T   
Sbjct: 496 GLRNIGNTCFMNSVIQCLSHTTELTRFLRTHHGSRSSATKDQLILFEFAKLIQEMWT--- 552

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
             S    ++ +D+ R FS                + +     Q+DAQEFL F +D +H  
Sbjct: 553 --SSVHTVTPMDLKRAFS--------------AKHRMYSDYNQQDAQEFLRFFLDSLHSA 596

Query: 322 LLK-LQGESTSI--NGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           L   ++GE+ +I  N ++     L    EW T   ++++++ R          D+F GQL
Sbjct: 597 LNSGIKGETLNIDDNLSDNKKADLTW--EWYT---RHENSLVR----------DLFVGQL 641

Query: 379 KSVVKAQ--GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 436
           KS +K    GN  S T  PF  L + + S +   +E  L LF   E L+G    +     
Sbjct: 642 KSTLKCTTCGN-TSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREEILDGDEMPTCSKCK 700

Query: 437 V-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDL 486
                 KS  IQ   K L++HL RFS      +KL   V FP      RDL
Sbjct: 701 TRRKCTKSFTIQRFPKYLVIHLKRFS--ETRWSKLSNIVEFP---TADRDL 746


>gi|326919202|ref|XP_003205871.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Meleagris
           gallopavo]
          Length = 578

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 124/286 (43%), Gaps = 45/286 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  A        D     
Sbjct: 248 GLVNFGNTCYCNSVLQALYFCRPFRENVLSYKAQQKKKENLLTCLA--------DLFHSI 299

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D L
Sbjct: 300 ATQKKKVGVI------PPKKFISRLRKENDLFDNYM-----QQDAHEFLNYLLNTIADIL 348

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
            + + +           ++ AEE+        NK  +T         + +IF G L +  
Sbjct: 349 QEEKKQEKQNGKLKNGNMNEAEEN--------NKQELT--------WVHEIFQGTLTNET 392

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGVV 438
           +       S+  + FL L +D+  E   +I   LR FS  E L   + Y   +       
Sbjct: 393 RCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETC--CSKQ 448

Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 449 EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 494


>gi|19338632|gb|AAL86740.1|AF441835_1 deubiquitinating enzyme UBH1 [Mus musculus]
          Length = 355

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 123/284 (43%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +  L  +  P+     LT         D     
Sbjct: 25  GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLA------DLFHSI 76

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 77  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 124

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG    L +   ++E     P             P+ + +IF G L +  
Sbjct: 125 LQEERKQEKQNG---RLRNGDVDNEDNNSTPD------------PTWVHEIFQGTLTNET 169

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 170 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 227

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 228 HKRMKVKKLPLILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 271


>gi|74025876|ref|XP_829504.1| ubiquitin carboxyl-terminal hydrolase [Trypanosoma brucei TREU927]
 gi|70834890|gb|EAN80392.1| ubiquitin carboxyl-terminal hydrolase, putative [Trypanosoma brucei
           brucei strain 927/4 GUTat10.1]
          Length = 442

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 137/293 (46%), Gaps = 32/293 (10%)

Query: 200 LPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT- 258
           + +G++N  N CF+NA LQA++   P  QL+      ++     PTL+A   ++  + T 
Sbjct: 88  IAKGIVNRTNSCFMNAMLQAIIFTPPLAQLIISASDSEL----CPTLSALGKWMLSYWTK 143

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P+  S     +SV       + S  E V   +   +   ++G   QEDA EFL  ++D +
Sbjct: 144 PANQSISPPQLSV-------AQSANEGVASTYL--LLARMNGYA-QEDALEFLQHLLDTI 193

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSD-IFGGQ 377
           + EL  L+      +  N A +   +E  W  V  + + ++   ++   S L D +FGG 
Sbjct: 194 NTELCSLEK-----HYCNRAAIDSGDEKGWTFVHGRERRSLREEKTGPHSILLDAVFGGT 248

Query: 378 LKSVVKAQG---NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 434
           ++S +K +    + AS  +  F +L +D+   A  T+E+AL        L+  +      
Sbjct: 249 IQSHLKGKSRVRSHASVVLDRFFVLQVDVGFNAECTLEEALE-----RTLQTEKVYDDSR 303

Query: 435 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS-TKLHKSVRFPLQLVLGRDL 486
           A  +   K++K+  L  +L   L R++  ++G   KL   VRF   LVL + +
Sbjct: 304 AKDLV--KTMKLHQLPLVLFAQLRRWAVTAEGELVKLDNIVRFGKTLVLPKSI 354


>gi|359496742|ref|XP_003635320.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Vitis
           vinifera]
          Length = 860

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 115/286 (40%), Gaps = 57/286 (19%)

Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDF 256
           +L P GL+N GN C+ NA LQ L    P    LLQ L ++  PK  +  +  F   +   
Sbjct: 392 ELSPFGLMNCGNSCYANAVLQCLTFTRPLASYLLQGLHSKACPKEDWCFICEFECLI--L 449

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
           +   G S             P SP    + ++     +     G  R+EDA EFL + +D
Sbjct: 450 EAREGKS-------------PLSPMGILSQIQRIGSHL-----GHGREEDAHEFLRYAVD 491

Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
            M    LK  G    +   +T LV L                               FGG
Sbjct: 492 TMQSVCLKDTGVVGPL-AEDTTLVGLT------------------------------FGG 520

Query: 377 QLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 435
            L S +K    +  S   +  + L ++I  + + T+E+AL  F+A E L+G      G  
Sbjct: 521 YLLSKIKCMKCRGKSERCERMMDLTVEIDGD-IGTLEEALAQFTATEILDGENKYQCGRC 579

Query: 436 -GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
                AKK + +     IL + L RF   + G  KL+KSVRFP  L
Sbjct: 580 RSYEKAKKKLMVLEAPNILTIVLKRFQSSNFG--KLNKSVRFPETL 623


>gi|387019611|gb|AFJ51923.1| Ubiquitin carboxyl-terminal hydrolase 46-like [Crotalus adamanteus]
          Length = 366

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 125/286 (43%), Gaps = 45/286 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  A        D     
Sbjct: 36  GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 87

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D L
Sbjct: 88  ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTVADIL 136

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
            + + +           V+ AEE+        +K  +T         + +IF G L +  
Sbjct: 137 QEEKKQEKQNGKLKNGNVNEAEEN--------SKQELT--------WVHEIFQGTLTNET 180

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGVV 438
           +       S+  + FL L +D+  E   +I   LR FS  E L   + Y   +  +    
Sbjct: 181 RCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ-- 236

Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 237 EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 282


>gi|355778037|gb|EHH63073.1| hypothetical protein EGM_15969, partial [Macaca fascicularis]
          Length = 343

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 118/291 (40%), Gaps = 54/291 (18%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTL---------TAFVGF 252
           GL N GN C++NA LQ L S SP V+  L       + K  YP L         TAF   
Sbjct: 45  GLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYITALQKETYPFLLPSDCSEVATAFAYL 104

Query: 253 VSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
           ++D                L      SP +F + L N  P        +  Q+DAQEFL 
Sbjct: 105 MTDM--------------WLGDSDCVSPEIFRSALGNLYPAF-----TKKTQQDAQEFLI 145

Query: 313 FIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSD 372
           ++++++H+ L K        +   +A        +W T         T T     S ++ 
Sbjct: 146 YVLNELHEALKKYHYPRRRSHEKGSAQRCCR---KWIT---------TET-----SVITQ 188

Query: 373 IFGGQLK-SVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSS 431
           +F GQL  S+V  +  K +   + F +L L I SE   +++D L+ F   + L     ++
Sbjct: 189 LFEGQLNYSIVCLKCEKCTYKNEVFTVLSLPIPSEYECSLQDCLQCFFQQDTLTW---NN 245

Query: 432 TGNAGVVTAKKSVKIQT----LSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
             +      K+   ++       KI+I HL RF        KL   + +PL
Sbjct: 246 QIHCSFCETKQETAVRAGISKAPKIIIFHLKRFDIQGTTKRKLRTDIHYPL 296


>gi|402591575|gb|EJW85504.1| ubiquitin carboxyl-terminal hydrolase [Wuchereria bancrofti]
          Length = 430

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 133/310 (42%), Gaps = 50/310 (16%)

Query: 203 GLINSGNLCFLNATLQALMSCSPF----VQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 258
           GL+N GN C+ N+ +QAL  C PF    +Q  Q+L+ +   K     LT       +  T
Sbjct: 38  GLVNFGNTCYCNSVIQALYFCRPFREKILQYKQQLK-KSYDKESENLLTCLADLFHNIAT 96

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS------GRPRQEDAQEFLS 312
                 +KK +  +      +P  F   LK    +  N+I           Q+DA EFL+
Sbjct: 97  ------QKKRVGTI------APKRFITKLKKENGETINNIYIILGIFDNFSQQDAHEFLN 144

Query: 313 FIMDQMHDEL----------LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           ++++ + + L            ++    +  G+N   V L   +      P NK  +   
Sbjct: 145 YLLNTISETLAEEKKAEKMEKMIRTNGMTKKGSN---VILPPYEPLTLCQPSNKIKLIWL 201

Query: 363 QSFLPSALSD------IFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDAL 415
              L  + SD      IF G L +  +       S+  + FL L +D+   A  +I   L
Sbjct: 202 N--LSGSKSDATWIQEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNA--SITHCL 257

Query: 416 RLFSAPENLEGYRTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHK 472
           R+FS  E L+G +     N      A+K ++I+ L ++L LHL RF Y  Q +  TKL  
Sbjct: 258 RVFSDMETLQGEQKYYCENCCSKHEAQKRMRIKKLPQMLALHLKRFKYVEQMNRHTKLSY 317

Query: 473 SVRFPLQLVL 482
            V FPL+L L
Sbjct: 318 RVLFPLELRL 327


>gi|336363428|gb|EGN91818.1| hypothetical protein SERLA73DRAFT_66796 [Serpula lacrymans var.
            lacrymans S7.3]
          Length = 1114

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 122/294 (41%), Gaps = 45/294 (15%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
            GL N GN C++N+T+Q L +  PF +   + R ++            V  ++   T    
Sbjct: 751  GLKNLGNTCYMNSTIQCLSATVPFARFFTDGRWKNA-----------VNMLNPLGTKGNL 799

Query: 263  SSKKKNISVLDIGRP----FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
            +    NI + ++        +P+ F   + +  P    S      Q D+QEFLSF++D +
Sbjct: 800  ALAFSNI-LYEMAHSELPHLTPNAFRRSICSHAPQFSGS-----EQHDSQEFLSFLLDGL 853

Query: 319  HDELLK-LQGESTSINGANTALV-----SLAEEDEWETVGPKNKSAVTRTQSFLPSALSD 372
            H++L + LQ     +     A +      +A + EW     +N S V            D
Sbjct: 854  HEDLNRVLQKPHYEVTPEREAELEKLPQQIASQQEWNLYRMRNDSLVV-----------D 902

Query: 373  IFGGQLKSVVKA-QGNKASATVQPFLLLHLDI------YSEAVHTIEDALRLFSAPENLE 425
             F GQ ++ ++    +K S T   F+ L L I         ++ +  DA       EN +
Sbjct: 903  YFQGQFRNRMECLTCHKTSTTYNTFMYLTLPIPIVRGSSKVSLQSCLDAFVKEEILENTD 962

Query: 426  GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
             +         +  A K + +  L  IL++HL RFS+    + K+   V FPL+
Sbjct: 963  AWYVHCPNCKALRKATKRLSLSRLPPILLIHLKRFSFKGPFTDKIETVVDFPLR 1016


>gi|359495665|ref|XP_003635052.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Vitis
           vinifera]
          Length = 942

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 116/288 (40%), Gaps = 57/288 (19%)

Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDF 256
           +L P GL+N GN C+ NA LQ L    P    LLQ L ++  PK  +  +  F   +   
Sbjct: 393 ELSPFGLMNCGNSCYANAVLQCLTFTRPLASYLLQGLHSKACPKEDWCFICEFECLI--L 450

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
           +   G S             P SP    + ++     +     G  R+EDA EFL + +D
Sbjct: 451 EAREGKS-------------PLSPMGILSQIQRIGSHL-----GHGREEDAHEFLRYAVD 492

Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
            M    LK  G    +   +T LV L                               FGG
Sbjct: 493 TMQSVCLKDTGVVGPL-AEDTTLVGLT------------------------------FGG 521

Query: 377 QLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 435
            L S +K    +  S   +  + L ++I  + + T+E+AL  F+A E L+G      G  
Sbjct: 522 YLLSKIKCMKCQGKSERCERMMDLTVEIDGD-IGTLEEALAQFTATEILDGENKYQCGRC 580

Query: 436 -GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 482
                AKK + +     IL + L RF   + G  KL+KSVRFP  L L
Sbjct: 581 RSYEKAKKKLMVLEAPNILTIVLKRFQSSNFG--KLNKSVRFPETLNL 626


>gi|403414636|emb|CCM01336.1| predicted protein [Fibroporia radiculosa]
          Length = 1176

 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 126/301 (41%), Gaps = 50/301 (16%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLT------AFVGFVSDF 256
            GL N GN C++N+T+Q L +  PF +   + R +       P  T      AF   + D 
Sbjct: 819  GLKNLGNTCYMNSTIQCLSATVPFARFFTDGRWKSAVNMMNPMGTKGNLAHAFANILRDM 878

Query: 257  DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
                     +  +  L      SP  F   L  + P       G   Q D+QEFL+F++D
Sbjct: 879  --------WQGELQCL------SPVTFRRSLCQYAPQF-----GGTEQHDSQEFLNFLLD 919

Query: 317  QMHDE----LLKLQGESTSINGANTALV--SLAEEDEWETVGPKNKSAVTRTQSFLPSAL 370
             +H++    L K Q +ST    A    +   +A E EW+    +N S V           
Sbjct: 920  GLHEDLNRVLQKPQIDSTPEREAELERLPTQIASEQEWQIWRMRNDSLVV---------- 969

Query: 371  SDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDI---YSEAVHTIEDALRLFSAPENLEG 426
             D F GQ ++ ++    +K S T   F+ L L I    S +  ++   L  F   E +E 
Sbjct: 970  -DFFQGQFRNRLECLTCHKTSTTYNTFMYLTLPIPTSRSLSKVSLSHCLDAFVKEEVMEK 1028

Query: 427  YRTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRD 485
                +  +   +  A K++ +  L  +L++HL RFS     + K+   V +PL+   G D
Sbjct: 1029 SDAWNCPHCKTLRKATKNLSLSRLPPVLLIHLKRFSSKGHFTDKIETFVDYPLR---GLD 1085

Query: 486  L 486
            L
Sbjct: 1086 L 1086


>gi|428166280|gb|EKX35258.1| hypothetical protein GUITHDRAFT_79938, partial [Guillardia theta
           CCMP2712]
          Length = 347

 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 121/301 (40%), Gaps = 67/301 (22%)

Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ-ELRTRDIPKAGYPTLTAFVGF 252
           K V  + P GL+N GN CF NA LQ L    P   L + +  ++ I + G     A    
Sbjct: 30  KHVNKIGP-GLLNVGNTCFCNAVLQCLTYTPPLANLCKAQEHSKRITRDGQGKFDALKEV 88

Query: 253 VSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNS---ISGR---PRQED 306
                T S  +                    + VLK    ++ NS   I  R    RQED
Sbjct: 89  ERHIITSSRCT--------------------QGVLK--PSNIVNSFRKIGARLRLGRQED 126

Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
           A EF   +M+ MH               A+ A     E        P +++A T      
Sbjct: 127 AHEFTRLLMEAMHL--------------ADLAACRFTE-------SPYSRAAQT------ 159

Query: 367 PSALSDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
              +  IFGG L+S V+ +  +  S T   FL L L+I  +    I DALRLF+ PE L+
Sbjct: 160 -GLVHGIFGGHLRSQVRCETCRYNSNTYDAFLDLSLEI--KKADNITDALRLFTKPEILD 216

Query: 426 G---YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG-STKLHKSVRFPLQLV 481
           G   Y+ S  G     T + SV    L  +L LHL RF     G S KL K V F   L 
Sbjct: 217 GNNKYKCSHCGCKTRATKRFSVHRAPL--VLQLHLKRFETSWSGNSCKLSKHVMFEQTLQ 274

Query: 482 L 482
           L
Sbjct: 275 L 275


>gi|146161769|ref|XP_001033384.2| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
           thermophila]
 gi|146142812|gb|EAR85721.2| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
           thermophila SB210]
          Length = 686

 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 132/305 (43%), Gaps = 55/305 (18%)

Query: 190 NEPVKSVKDLL--PRGLINSGNLCFLNATLQALMSCSP-----FVQLLQELRTRDIPKAG 242
           N+P K +K LL  P  L N+ N C++NA LQ+++S        F ++  E + + I K  
Sbjct: 358 NDPSK-LKKLLFRPYRLENNSNYCYMNACLQSILSIGELNTYFFDKMYLEYKDQ-ITKKP 415

Query: 243 YPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAV-LKNFTPDVPNSISGR 301
           +    A+   ++ F   +               +  SPS+F+    +NF P+        
Sbjct: 416 HKFTIAYSDLLTRFQKSNSN-------------QIISPSLFKKYSQQNFDPN-------- 454

Query: 302 PRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTR 361
             Q DAQE+L F++ ++ DEL        +    N       +  +      K       
Sbjct: 455 -EQHDAQEYLRFVLGEIQDEL--------NFPLPNKRPAEFKDSQQASKFYFK------- 498

Query: 362 TQSFLPSALSDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
              +  S +  +F GQL S V+ Q  K  S+T  PFL L L I S+++  +   + LF  
Sbjct: 499 ---YHTSIVDRLFCGQLISKVQCQKCKYISSTFDPFLDLSLPIESKSLKDLNSCMDLFFK 555

Query: 421 PENLEG-YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
           PE ++G Y+           A KS ++  + K L++HL RF       TK+ + + +P  
Sbjct: 556 PEEIDGEYKCEKC--TKTSRAIKSCQLGNIPKYLVIHLKRFKMFPY-KTKIKQQISYPST 612

Query: 480 LVLGR 484
           L + +
Sbjct: 613 LDISK 617


>gi|19920418|ref|NP_608462.1| CG14619, isoform A [Drosophila melanogaster]
 gi|24643789|ref|NP_728453.1| CG14619, isoform D [Drosophila melanogaster]
 gi|24643791|ref|NP_728454.1| CG14619, isoform E [Drosophila melanogaster]
 gi|17862942|gb|AAL39948.1| SD04280p [Drosophila melanogaster]
 gi|22832690|gb|AAF50952.2| CG14619, isoform A [Drosophila melanogaster]
 gi|22832691|gb|AAN09564.1| CG14619, isoform D [Drosophila melanogaster]
 gi|22832692|gb|AAN09565.1| CG14619, isoform E [Drosophila melanogaster]
          Length = 856

 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 120/282 (42%), Gaps = 44/282 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELR-TRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ +Q L       + L+    +R +       L  F   + +  T   
Sbjct: 532 GLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSLSTKDQQILHEFAKLIQEMWT--- 588

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
             +    ++ +++ R FS                + +     Q+DAQEFL F +D +H  
Sbjct: 589 --ANVHTVTPMELKRAFS--------------TKHRMYSDYNQQDAQEFLRFFLDSLHSA 632

Query: 322 LLK-LQGESTSI--NGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           L   ++GE+ +I  N ++     L    EW T   ++++++ R          D+F GQL
Sbjct: 633 LNSGVKGETLNIDDNLSDNKKADLTW--EWYT---RHENSLVR----------DLFVGQL 677

Query: 379 KSVVKAQ--GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 436
           KS +K    GN  S T  PF  L + + S +   +E  L LF   E L+G    +     
Sbjct: 678 KSTLKCTTCGN-TSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREEVLDGDEMPTCAKCK 736

Query: 437 V-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 477
                 KS  IQ   K L++HL RFS      +KL   V FP
Sbjct: 737 TRRKCTKSFTIQRFPKYLVIHLKRFSETRW--SKLSNIVEFP 776


>gi|339255776|ref|XP_003370631.1| ubiquitin carboxyl- hydrolase superfamily [Trichinella spiralis]
 gi|316965826|gb|EFV50494.1| ubiquitin carboxyl- hydrolase superfamily [Trichinella spiralis]
          Length = 330

 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 122/281 (43%), Gaps = 45/281 (16%)

Query: 208 GNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKK 267
           GN C+ N+ +QAL  C PF + +   +++ + KAG       +     F +    S++K+
Sbjct: 2   GNTCYCNSVIQALYFCRPFREKVLNYKSQ-MKKAGNQKENLLLCLADLFHSI---STQKR 57

Query: 268 NISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQG 327
            +  +      +P  F   LK       N +     Q+DA EFL+++++ + D LL+ + 
Sbjct: 58  RVGTI------APKKFIGRLKK-----ENDLFDNYMQQDAHEFLNYLLNTVADILLEEKR 106

Query: 328 ESTSINGANTALV--SLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA- 384
               I+G +   V   LAE   W                     + D+F G L +  +  
Sbjct: 107 HEKRISGGHKTQVKDKLAEH-TW---------------------VHDVFQGTLTNETRCL 144

Query: 385 QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKS 443
                S+  + FL L +D+      +I   LR FSA E L   ++           A+K 
Sbjct: 145 NCETVSSKDEDFLDLSVDVQQNT--SITHCLREFSATETLCNEHKYYCDICCSKQEAQKR 202

Query: 444 VKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL 482
           ++I+ L  IL LHL RF Y  Q +  TKL   V FPL+L L
Sbjct: 203 MRIKKLPLILALHLKRFKYVEQYNRYTKLSYRVLFPLELRL 243


>gi|34328057|ref|NP_035799.1| ubiquitin carboxyl-terminal hydrolase 12 [Mus musculus]
 gi|81881643|sp|Q9D9M2.2|UBP12_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
           Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
           thioesterase 12; AltName: Full=Ubiquitin-hydrolyzing
           enzyme 1; AltName: Full=Ubiquitin-specific-processing
           protease 12
 gi|26330798|dbj|BAC29129.1| unnamed protein product [Mus musculus]
 gi|26355005|dbj|BAB24720.2| unnamed protein product [Mus musculus]
 gi|45768743|gb|AAH68136.1| Ubiquitin specific peptidase 12 [Mus musculus]
 gi|74189064|dbj|BAE39295.1| unnamed protein product [Mus musculus]
          Length = 370

 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 123/284 (43%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF +  + L  +  P+     LT         D     
Sbjct: 40  GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKENLLTCLA------DLFHSI 91

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 92  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 139

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG    L +   ++E     P             P+ + +IF G L +  
Sbjct: 140 LQEERKQEKQNG---RLRNGDVDNEDNNSTPD------------PTWVHEIFQGTLTNET 184

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 185 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 243 HKRMKVKKLPLILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 286


>gi|297798806|ref|XP_002867287.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297313123|gb|EFH43546.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 618

 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 118/290 (40%), Gaps = 58/290 (20%)

Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDF 256
           +L P GL+N GN CF N  LQ L    P V  LL++   R+     +        F  +F
Sbjct: 164 ELAPCGLMNCGNSCFANVILQCLSWTRPLVAYLLEKGHKRECMHNDW-------CFFCEF 216

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
            T    +S+ +         PFSP    + L N    +     G  RQEDA EF+ + +D
Sbjct: 217 QTHVERASQSRF--------PFSPMNIISRLTNIGGTL-----GYGRQEDAHEFMRYAID 263

Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
            M    L                    EE   E + P      T  Q         IFGG
Sbjct: 264 MMQSVCL--------------------EEFGGEKIVPPRSQETTLIQY--------IFGG 295

Query: 377 QLKSVVKAQ-GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSST 432
            L+S V+    N  S   +  + L ++++ +AV ++E+ L  F+A E L G   Y+    
Sbjct: 296 LLQSQVQCTVCNHVSDQYENMMDLIVEMHGDAV-SLEECLDQFTAEEWLHGDNMYKCDRC 354

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 482
            +   V A K + I     IL + L R+  G  G  KL+K + FP  L L
Sbjct: 355 SD--YVKACKRLTIWRAPNILTIALKRYQGGRYG--KLNKRISFPATLDL 400


>gi|195392830|ref|XP_002055057.1| GJ19166 [Drosophila virilis]
 gi|194149567|gb|EDW65258.1| GJ19166 [Drosophila virilis]
          Length = 938

 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 115/283 (40%), Gaps = 45/283 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTRDIPKAGYPTLTAFVGFVSDFDTPS 260
           GL N GN CF+N+ +Q L   +   + L+     TR         L  F   + +  T +
Sbjct: 613 GLRNIGNTCFMNSVIQCLSHTTELTRFLRAHHTSTRTATSKDQQILHEFAKLIQEMWTTN 672

Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
             S     ++ +++ R FS                + +     Q+DAQEFL F +D +H 
Sbjct: 673 VHS-----VTPMELKRAFS--------------TKHRMYSDYNQQDAQEFLRFFLDSLHS 713

Query: 321 EL-LKLQGESTSI--NGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
            L   ++GE+ +I  N ++     L     WE       S +            D+F GQ
Sbjct: 714 ALNTGVKGETLNIDDNLSDNKKADLT----WEWYARHENSLI-----------RDLFVGQ 758

Query: 378 LKSVVKAQ--GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 435
           LKS +K    GN  S T  PF  L + + S +   +E  L LF   E L+G    +    
Sbjct: 759 LKSTLKCTTCGN-TSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREEVLDGDEMPTCSKC 817

Query: 436 GV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 477
                  KS  IQ   K L++HL RFS      +KL   V FP
Sbjct: 818 KTRRKCTKSFTIQRFPKYLVIHLKRFS--ETRWSKLSNIVEFP 858


>gi|344252454|gb|EGW08558.1| Ubiquitin carboxyl-terminal hydrolase 21 [Cricetulus griseus]
          Length = 484

 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 119/279 (42%), Gaps = 42/279 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313

Query: 319 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 369
           H E+ +    +  I  +           +L EE E       N   K  + R      S 
Sbjct: 314 HLEINRRGRRAPPILASGPVPSPPRRGGALHEEPELSDDDRANLMWKRYLERED----SK 369

Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
           + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 429

Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSY 462
           E             T + K + +Q   +IL+LH++ F +
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHILIFQF 468


>gi|354468571|ref|XP_003496726.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
           [Cricetulus griseus]
          Length = 450

 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 124/284 (43%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +  L  +  P+     LT         D     
Sbjct: 120 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLA------DLFHSI 171

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 172 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 219

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG       L   D    V  ++ ++        P+ + +IF G L +  
Sbjct: 220 LQEERKQEKQNG------RLRNGD----VDTEDNNSTPD-----PTWVHEIFQGTLTNET 264

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 265 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 322

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 323 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 366


>gi|301777688|ref|XP_002924262.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like, partial
           [Ailuropoda melanoleuca]
          Length = 354

 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 121/284 (42%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +  L  +  P+     LT         D     
Sbjct: 24  GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLA------DLFHSI 75

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 76  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 123

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG                +   N  +     +  P+ + +IF G L +  
Sbjct: 124 LQEERKQEKQNGR---------------LPNGNIDSENNNSTPDPTWVHEIFQGTLTNET 168

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 169 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 226

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 227 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 270


>gi|340708658|ref|XP_003392939.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Bombus
           terrestris]
          Length = 354

 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 121/284 (42%), Gaps = 44/284 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + + E + R+  +     LT            S  
Sbjct: 25  GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARN-KRTKETLLTCLADLFY-----SIA 78

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           + KKK  S+       +P  F A L+    +  N +     Q+DA EFL+F+++ +++ +
Sbjct: 79  TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 126

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L  + +S    G   A          +   P             P+ + +IF G L S  
Sbjct: 127 LAERSQSKPTGGKCGA---------GDAGSPPE-----------PTWVHEIFQGILTSET 166

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + F  L +D+      +I   LR FS  E L    +      +    A
Sbjct: 167 RCLNCETVSSKDEDFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFKCDHCSSYQEA 224

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL 482
           +K ++++ L  IL LHL RF Y  Q +   K+   V FPL+L L
Sbjct: 225 QKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRL 268


>gi|336381480|gb|EGO22632.1| hypothetical protein SERLADRAFT_372069 [Serpula lacrymans var.
           lacrymans S7.9]
          Length = 1030

 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 123/292 (42%), Gaps = 43/292 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL N GN C++N+T+Q L +  PF +   + R ++            V  ++   T    
Sbjct: 669 GLKNLGNTCYMNSTIQCLSATVPFARFFTDGRWKNA-----------VNMLNPLGTKGNL 717

Query: 263 SSKKKNISVLDIGRP----FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           +    NI + ++        +P+ F   + +  P    S      Q D+QEFLSF++D +
Sbjct: 718 ALAFSNI-LYEMAHSELPHLTPNAFRRSICSHAPQFSGS-----EQHDSQEFLSFLLDGL 771

Query: 319 HDELLK-LQGESTSINGANTALV-----SLAEEDEWETVGPKNKSAVTRTQSFLPSALSD 372
           H++L + LQ     +     A +      +A + EW     +N S V            D
Sbjct: 772 HEDLNRVLQKPHYEVTPEREAELEKLPQQIASQQEWNLYRMRNDSLVV-----------D 820

Query: 373 IFGGQLKSVVKA-QGNKASATVQPFLLLHLDI---YSEAVHTIEDALRLFSAPENLEGYR 428
            F GQ ++ ++    +K S T   F+ L L I      +  +++  L  F   E LE   
Sbjct: 821 YFQGQFRNRMECLTCHKTSTTYNTFMYLTLPIPIVRGSSKVSLQSCLDAFVKEEILENTD 880

Query: 429 TSSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                N   +  A K + +  L  IL++HL RFS+    + K+   V FPL+
Sbjct: 881 AWHCPNCKALRKATKRLSLSRLPPILLIHLKRFSFKGPFTDKIETVVDFPLR 932


>gi|344284611|ref|XP_003414059.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Loxodonta
           africana]
          Length = 368

 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 121/284 (42%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +  L  +  P+     LT         D     
Sbjct: 38  GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLA------DLFHSI 89

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 90  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 137

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG                +   N  +     +  P+ + +IF G L +  
Sbjct: 138 LQEERKQEKQNGR---------------LPNGNIDSENNNSTPDPTWVHEIFQGTLTNET 182

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 183 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 240

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 241 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 284


>gi|24643793|ref|NP_728455.1| CG14619, isoform C [Drosophila melanogaster]
 gi|386764876|ref|NP_001245799.1| CG14619, isoform F [Drosophila melanogaster]
 gi|386764878|ref|NP_001245800.1| CG14619, isoform G [Drosophila melanogaster]
 gi|22832693|gb|AAN09566.1| CG14619, isoform C [Drosophila melanogaster]
 gi|28317311|gb|AAO39652.1| AT11044p [Drosophila melanogaster]
 gi|262331596|gb|ACY46087.1| MIP13335p [Drosophila melanogaster]
 gi|383293538|gb|AFH07511.1| CG14619, isoform F [Drosophila melanogaster]
 gi|383293539|gb|AFH07512.1| CG14619, isoform G [Drosophila melanogaster]
          Length = 938

 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 120/282 (42%), Gaps = 44/282 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELR-TRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ +Q L       + L+    +R +       L  F   + +  T   
Sbjct: 614 GLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSLSTKDQQILHEFAKLIQEMWT--- 670

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
             +    ++ +++ R FS                + +     Q+DAQEFL F +D +H  
Sbjct: 671 --ANVHTVTPMELKRAFS--------------TKHRMYSDYNQQDAQEFLRFFLDSLHSA 714

Query: 322 LLK-LQGESTSI--NGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           L   ++GE+ +I  N ++     L    EW T   ++++++ R          D+F GQL
Sbjct: 715 LNSGVKGETLNIDDNLSDNKKADLTW--EWYT---RHENSLVR----------DLFVGQL 759

Query: 379 KSVVKAQ--GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 436
           KS +K    GN  S T  PF  L + + S +   +E  L LF   E L+G    +     
Sbjct: 760 KSTLKCTTCGN-TSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREEVLDGDEMPTCAKCK 818

Query: 437 V-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 477
                 KS  IQ   K L++HL RFS      +KL   V FP
Sbjct: 819 TRRKCTKSFTIQRFPKYLVIHLKRFSETRW--SKLSNIVEFP 858


>gi|291410352|ref|XP_002721472.1| PREDICTED: Ubiquitin carboxyl-terminal hydrolase 12-like
           [Oryctolagus cuniculus]
          Length = 475

 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 121/284 (42%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF +  + L  +  P+     LT         D     
Sbjct: 145 GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKESLLTCLA------DLFHSI 196

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 197 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 244

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG                +   N  +     +  P+ + +IF G L +  
Sbjct: 245 LQEERKQEKQNG---------------RLPNGNIDSENNNSTPDPTWVHEIFQGTLTNET 289

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 290 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 347

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 348 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 391


>gi|225468498|ref|XP_002270407.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Vitis vinifera]
          Length = 369

 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 127/300 (42%), Gaps = 37/300 (12%)

Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQELRT--RDIPKAGYPTL 246
           K++ D  P G     L N GN C+ N+ LQAL  C PF + L E  T  +++  A    L
Sbjct: 10  KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYTNNKNLADAEENLL 69

Query: 247 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
           T               SS+KK   V+      +P  F   LK       N +      +D
Sbjct: 70  TCLADLFMQI------SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQD 112

Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
           A EFL+F+++++ D L K    S S    ++     A        GPK   A    +  L
Sbjct: 113 AHEFLNFLLNELVDILEKEASASKSDPETSSPPEKTAN-------GPKTAQANGVQKEPL 165

Query: 367 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
            + +   F G L +  +  +    +A  + FL L LDI  E   +I   L+ FS+ E L 
Sbjct: 166 VTWVHKNFQGILTNETRCLRCETVTARDETFLDLSLDI--EQNSSITSCLKNFSSTETLN 223

Query: 426 GY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
              +        +  A+K +KI+    IL++HL RF Y  Q     KL   V FPL+L L
Sbjct: 224 AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL 283


>gi|90079713|dbj|BAE89536.1| unnamed protein product [Macaca fascicularis]
          Length = 359

 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 126/288 (43%), Gaps = 49/288 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  A        D     
Sbjct: 29  GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLSHSI 80

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D +
Sbjct: 81  ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 128

Query: 323 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
           L+ + +    NG   N  +   AE          NK  +T         + +IF G L +
Sbjct: 129 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 171

Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 436
             +       S+  + FL L +D+  E   +I   LR FS  E L   + Y   +  +  
Sbjct: 172 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 229

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
              A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 230 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 275


>gi|383856530|ref|XP_003703761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Megachile
           rotundata]
          Length = 354

 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 121/284 (42%), Gaps = 44/284 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + + E + R+  +     LT            S  
Sbjct: 25  GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARN-KRTKETLLTCLADLFY-----SIA 78

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           + KKK  S+       +P  F A L+    +  N +     Q+DA EFL+F+++ +++ +
Sbjct: 79  TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 126

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L  + +S    G   A          +   P             P+ + +IF G L S  
Sbjct: 127 LAERNQSKPAGGKCGA---------GDAGSPPE-----------PTWVHEIFQGILTSET 166

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + F  L +D+      +I   LR FS  E L    +      +    A
Sbjct: 167 RCLNCETVSSKDEDFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFKCDHCSSYQEA 224

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL 482
           +K ++++ L  IL LHL RF Y  Q +   K+   V FPL+L L
Sbjct: 225 QKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRL 268


>gi|168025514|ref|XP_001765279.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683598|gb|EDQ70007.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 373

 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 138/313 (44%), Gaps = 40/313 (12%)

Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFV-QLLQEL-RTRDIPKAGYPTL 246
           K++ D  P G     L N GN C+ N+ LQAL  C PF  QLL+   +++ + +A    L
Sbjct: 12  KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFRDQLLEHCGQSKPVAEAEENLL 71

Query: 247 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
           T      S  +      S+KK   V+      +P  F   +K       N +      +D
Sbjct: 72  TCLSELFSQIN------SQKKKTGVI------APKRFVQRVKK-----QNELFRSYMHQD 114

Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTR--TQS 364
           A EFL+F+++++ D L +    + S +G  T+          + VG  + S +     + 
Sbjct: 115 AHEFLNFLLNELVDILEREAKAAKSNSGCETS--------PGKVVGNGSVSGLANGTHKE 166

Query: 365 FLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 423
            + + +  IF G L +  +  +    +A  + FL L LDI  E   +I   LR FS+ E 
Sbjct: 167 AVVTWVHKIFQGILTNETRCLRCETITARDETFLDLSLDI--EQNSSITSCLRNFSSTET 224

Query: 424 LEGY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQL 480
           L    +        +  A+K +KI++  +IL LHL RF Y  Q     KL   V FPL+L
Sbjct: 225 LNAEDKFFCDKCCSLQEAQKRMKIKSAPRILALHLKRFKYIEQLGRYKKLSYRVVFPLEL 284

Query: 481 VLGRDLLVTPSAE 493
            L       P +E
Sbjct: 285 KLCNTTDDAPGSE 297


>gi|126327583|ref|XP_001376012.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Monodelphis
           domestica]
          Length = 376

 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 121/284 (42%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +  L  +  P+     LT         D     
Sbjct: 46  GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLA------DLFHSI 97

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 98  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 145

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG                +   N  +     +  P+ + +IF G L +  
Sbjct: 146 LQEERKQEKQNGR---------------LPNGNIDSENNNSTPDPTWVHEIFQGTLTNET 190

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 191 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 248

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 249 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 292


>gi|350413154|ref|XP_003489897.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Bombus
           impatiens]
          Length = 369

 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 121/284 (42%), Gaps = 44/284 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + + E + R+  +     LT            S  
Sbjct: 40  GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARN-KRTKETLLTCLADLFY-----SIA 93

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           + KKK  S+       +P  F A L+    +  N +     Q+DA EFL+F+++ +++ +
Sbjct: 94  TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 141

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L  + +S    G   A          +   P             P+ + +IF G L S  
Sbjct: 142 LAERSQSKPTGGKCGA---------GDAGSPPE-----------PTWVHEIFQGILTSET 181

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + F  L +D+      +I   LR FS  E L    +      +    A
Sbjct: 182 RCLNCETVSSKDEDFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFKCDHCSSYQEA 239

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL 482
           +K ++++ L  IL LHL RF Y  Q +   K+   V FPL+L L
Sbjct: 240 QKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRL 283


>gi|66530407|ref|XP_625039.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Apis
           mellifera]
 gi|380023380|ref|XP_003695501.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Apis
           florea]
          Length = 354

 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 121/284 (42%), Gaps = 44/284 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + + E + R+  +     LT            S  
Sbjct: 25  GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARN-KRTKETLLTCLADLFY-----SIA 78

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           + KKK  S+       +P  F A L+    +  N +     Q+DA EFL+F+++ +++ +
Sbjct: 79  TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 126

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L  + +S    G   A          +   P             P+ + +IF G L S  
Sbjct: 127 LAERSQSKPAGGKCGA---------GDAGSPPE-----------PTWVHEIFQGILTSET 166

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + F  L +D+      +I   LR FS  E L    +      +    A
Sbjct: 167 RCLNCETVSSKDEDFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFKCDHCSSYQEA 224

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL 482
           +K ++++ L  IL LHL RF Y  Q +   K+   V FPL+L L
Sbjct: 225 QKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRL 268


>gi|147776521|emb|CAN74012.1| hypothetical protein VITISV_003549 [Vitis vinifera]
          Length = 1225

 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 121/291 (41%), Gaps = 59/291 (20%)

Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDF 256
           +L P GL+N GN C+ NA LQ L    P     LQ L ++   K  +     F   +   
Sbjct: 657 ELRPCGLMNCGNSCYANAVLQCLAFTPPLTSYFLQGLHSKSCLKKEWCFTCEFESLI--L 714

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
               G S             P SP    + ++N    +     G  ++EDA EFL + +D
Sbjct: 715 KAKEGNS-------------PLSPLGILSQIRNIGSHL-----GNGKEEDAHEFLRYAID 756

Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
            M    LK  G    +N +     SL EE                      S +   FGG
Sbjct: 757 AMQSVCLKEAG----VNASG----SLEEET---------------------SLIGLTFGG 787

Query: 377 QLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSST 432
            L+S +K  + +  S   +  + L ++I  + + T+E+AL  F++ E L+G   Y+ S  
Sbjct: 788 YLRSKIKCMKCHGKSERHERMMDLTVEIEGD-IGTLEEALHKFTSTEILDGENKYQCSRC 846

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLG 483
            +     AKK + +     IL + L RF  G  G  KL+KS+RFP  L L 
Sbjct: 847 KS--YEKAKKKLTVSEAPNILTIALKRFQSGKFG--KLNKSIRFPEILDLA 893


>gi|395843770|ref|XP_003794646.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 1
           [Otolemur garnettii]
          Length = 366

 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 126/286 (44%), Gaps = 45/286 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  A        D     
Sbjct: 36  GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 87

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D +
Sbjct: 88  ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 135

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG       L   +  ET    NK  +T         + +IF G L +  
Sbjct: 136 LQEEKKQEKQNG------KLKNGNMNET-AENNKPELT--------WVHEIFQGTLTNET 180

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGVV 438
           +       S+  + FL L +D+  E   +I   LR FS  E L   + Y   +  +    
Sbjct: 181 RCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ-- 236

Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 237 EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 282


>gi|225459111|ref|XP_002283885.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Vitis
           vinifera]
          Length = 1213

 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 121/291 (41%), Gaps = 59/291 (20%)

Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDF 256
           +L P GL+N GN C+ NA LQ L    P     LQ L ++   K  +     F   +   
Sbjct: 645 ELRPCGLMNCGNSCYANAVLQCLAFTPPLTSYFLQGLHSKSCLKKEWCFTCEFESLI--L 702

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
               G S             P SP    + ++N    +     G  ++EDA EFL + +D
Sbjct: 703 KAKEGNS-------------PLSPLGILSQIRNIGSHL-----GNGKEEDAHEFLRYAID 744

Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
            M    LK  G    +N +     SL EE                      S +   FGG
Sbjct: 745 AMQSVCLKEAG----VNASG----SLEEET---------------------SLIGLTFGG 775

Query: 377 QLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSST 432
            L+S +K  + +  S   +  + L ++I  + + T+E+AL  F++ E L+G   Y+ S  
Sbjct: 776 YLRSKIKCMKCHGKSERHERMMDLTVEIEGD-IGTLEEALHKFTSTEILDGENKYQCSRC 834

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLG 483
            +     AKK + +     IL + L RF  G  G  KL+KS+RFP  L L 
Sbjct: 835 KS--YEKAKKKLTVSEAPNILTIALKRFQSGKFG--KLNKSIRFPEILDLA 881


>gi|291411119|ref|XP_002721840.1| PREDICTED: ubiquitin specific peptidase 46 [Oryctolagus cuniculus]
          Length = 360

 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 127/288 (44%), Gaps = 49/288 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  A        D     
Sbjct: 30  GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 81

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D +
Sbjct: 82  ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 129

Query: 323 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
           L+ + +    NG   N  +   AE          NK+ +T         + +IF G L +
Sbjct: 130 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKAELT--------WVHEIFQGTLTN 172

Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 436
             +       S+  + FL L +D+  E   +I   LR FS  E L   + Y   +  +  
Sbjct: 173 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 230

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
              A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 231 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 276


>gi|449269690|gb|EMC80441.1| Ubiquitin carboxyl-terminal hydrolase 12, partial [Columba livia]
          Length = 353

 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 123/284 (43%), Gaps = 42/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF   +  L  +  P+     LT         D     
Sbjct: 24  GLVNFGNTCYCNSVLQALYFCRPFRDKV--LAYKSQPRKKENLLTCLA------DLFHSI 75

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 76  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 123

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG       L   +    +  +NKS         P+ + +IF G L +  
Sbjct: 124 LQEERKQEKQNG------RLPNGN----IDNENKSPPD------PTWVHEIFQGTLTNET 167

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 168 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 225

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 226 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 269


>gi|395852854|ref|XP_003798945.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Otolemur
           garnettii]
          Length = 1330

 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 123/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCIMQAHITQALSNPG 171

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL + +D M  
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  +   +NG+N                       T+  +F    +  IFGG L+S
Sbjct: 210 -------QKACLNGSNKL------------------DRHTQATTF----VCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  T+  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQTVNKALEQFVKPEQLDGENAYKCSKCKK-- 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +VTA K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVTASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|417410176|gb|JAA51565.1| Putative ubiquitin carboxyl-terminal hydrolase 12, partial
           [Desmodus rotundus]
          Length = 374

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 123/284 (43%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF +  + L  +  P+     LT         D     
Sbjct: 44  GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKENLLTCLA------DLFHSI 95

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 96  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 143

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG    L + + + E     P             P+ + +IF G L +  
Sbjct: 144 LQEERKQEKQNG---RLPNGSVDSENNHSTPD------------PTWVHEIFQGTLTNET 188

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 189 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 246

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 247 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 290


>gi|168025346|ref|XP_001765195.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683514|gb|EDQ69923.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 371

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 133/299 (44%), Gaps = 35/299 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFV-QLLQEL-RTRDIPKAGYPTLTAFVGFVSDFDTPS 260
           GL N GN C+ N+ LQAL  C PF  QLL+   +++ + +A    LT      S  +   
Sbjct: 24  GLENFGNTCYCNSVLQALYFCVPFRDQLLEHCGQSKPVAEAEENLLTCLSELFSQIN--- 80

Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
              S+KK   V+      +P  F   +K       N +      +DA EFL+F+++++ D
Sbjct: 81  ---SQKKKTGVI------APKRFVQRVKK-----QNELFRSYMHQDAHEFLNFLLNELVD 126

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTR--TQSFLPSALSDIFGGQL 378
            L +    + S +G  T+          + VG  + S +     +  + + +  IF G L
Sbjct: 127 ILEREAKAAKSNSGCETS--------PGKVVGNGSVSGLANGTHKEAVVTWVHKIFQGIL 178

Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY-RTSSTGNAG 436
            +  +  +    +A  + FL L LDI  E   +I   LR FS+ E L    +        
Sbjct: 179 TNETRCLRCETITARDETFLDLSLDI--EQNSSITSCLRNFSSTETLNAEDKFFCDKCCS 236

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAE 493
           +  A+K +KI++  +IL LHL RF Y  Q     KL   V FPL+L L       P +E
Sbjct: 237 LQEAQKRMKIKSAPRILALHLKRFKYIEQLGRYKKLSYRVVFPLELKLCNTTDDAPGSE 295


>gi|440900637|gb|ELR51720.1| Ubiquitin carboxyl-terminal hydrolase 12, partial [Bos grunniens
           mutus]
          Length = 353

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 119/284 (41%), Gaps = 42/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +  L  +  P+     LT         D     
Sbjct: 24  GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKESLLTCLA------DLFHSI 75

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 76  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 123

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG                  P          +  P+ + +IF G L +  
Sbjct: 124 LQEERKQEKQNGR----------------LPNGNIDSENNSTPDPTWVHEIFQGTLTNET 167

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 168 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 225

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 226 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 269


>gi|403414385|emb|CCM01085.1| predicted protein [Fibroporia radiculosa]
          Length = 658

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 131/326 (40%), Gaps = 54/326 (16%)

Query: 183 EVPMKAINEPVKSVKDLLPR--GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK 240
           E P    N PV    D+  R  GL N GN C++N+T+Q L +  PF +   E R +    
Sbjct: 308 EPPRIRSNFPVTYWADMHIRTSGLKNLGNTCYMNSTIQCLSATVPFARFFTEGRWKSAIN 367

Query: 241 AGYPTLT------AFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDV 294
              P  T      AF   + D                       SP  F   L    P  
Sbjct: 368 MINPMGTKGNLAQAFANILQDLQQSESQC--------------LSPGAFRRSLCRHAPQF 413

Query: 295 PNSISGRPRQEDAQEFLSFIMDQMHDE----LLKLQGESTSINGANTALV--SLAEEDEW 348
             +      Q D+QEFL F++D +H++    L++ Q + T    A    +   +A E EW
Sbjct: 414 DGT-----EQHDSQEFLHFLLDGLHEDLNRVLVRAQIDPTPEREAELERLPTQIASEQEW 468

Query: 349 ETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSE- 406
           +    +N S V            D F GQL++ ++    +K S T   F+ L L + +  
Sbjct: 469 QIWQRRNDSLVV-----------DFFQGQLRNRLECLTCHKTSTTYNTFMYLTLPVPTRR 517

Query: 407 --AVHTIEDALRLFSAPENLEGYRTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYG 463
             +  ++   L  F   E +E     +  +   +  A K++ +  L  +L+++L RFS  
Sbjct: 518 GLSKVSLSQCLDAFVKEEVMEESDAWNCPHCKTLRKATKNLSLSRLPPVLLIYLKRFSSK 577

Query: 464 SQGSTKLHKSVRFPLQLVLGRDLLVT 489
              + K+   V +P+     RDL +T
Sbjct: 578 GHFTDKIETFVDYPV-----RDLDLT 598


>gi|355687430|gb|EHH26014.1| hypothetical protein EGK_15892 [Macaca mulatta]
          Length = 401

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 144/330 (43%), Gaps = 59/330 (17%)

Query: 166 GRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSP 225
           GR  NA+A    I G ++ P   INE           GL+N GN C+ N+ LQAL  C P
Sbjct: 34  GRGTNASALEKDI-GPEQFP---INEHY--------FGLVNFGNTCYCNSVLQALYFCRP 81

Query: 226 FVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLD----IGRPFSPS 281
           F + +   + +   K    T  A        D     +++KK + V+     I R    +
Sbjct: 82  FRENVLAYKAQQKKKENLLTCLA--------DLFHSIATQKKKVGVIPPKKFISRLRKEN 133

Query: 282 MFEAVLKNFT-PDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSING--ANTA 338
             E  +  F  PD+ ++      Q+DA EFL+++++ + D +L+ + +    NG   N  
Sbjct: 134 EPETEITTFCFPDLFDNYM----QQDAHEFLNYLLNTIAD-ILQEEKKQEKQNGKLKNGN 188

Query: 339 LVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFL 397
           +   AE          NK  +T         + +IF G L +  +       S+  + FL
Sbjct: 189 MNEPAE---------NNKPELT--------WVHEIFQGTLTNETRCLNCETVSSKDEDFL 231

Query: 398 LLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGVVTAKKSVKIQTLSKILI 454
            L +D+  E   +I   LR FS  E L   + Y   +  +     A+K ++++ L  IL 
Sbjct: 232 DLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ--EAQKRMRVKKLPMILA 287

Query: 455 LHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
           LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 288 LHLKRFKYMEQLHRYTKLSYRVVFPLELRL 317


>gi|327533544|pdb|2Y6E|A Chain A, Ubiquitin Specific Protease 4 Is Inhibited By Its
           Ubiquitin- Like Domain
 gi|327533545|pdb|2Y6E|B Chain B, Ubiquitin Specific Protease 4 Is Inhibited By Its
           Ubiquitin- Like Domain
 gi|327533546|pdb|2Y6E|C Chain C, Ubiquitin Specific Protease 4 Is Inhibited By Its
           Ubiquitin- Like Domain
 gi|327533547|pdb|2Y6E|D Chain D, Ubiquitin Specific Protease 4 Is Inhibited By Its
           Ubiquitin- Like Domain
 gi|327533548|pdb|2Y6E|E Chain E, Ubiquitin Specific Protease 4 Is Inhibited By Its
           Ubiquitin- Like Domain
 gi|327533549|pdb|2Y6E|F Chain F, Ubiquitin Specific Protease 4 Is Inhibited By Its
           Ubiquitin- Like Domain
          Length = 367

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 127/308 (41%), Gaps = 66/308 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN  F+N+ LQ L + +P     L++    +I +                D P G
Sbjct: 10  GLGNLGNTXFMNSALQCLSNTAPLTDYFLKDEYEAEINR----------------DNPLG 53

Query: 262 -----GSSKKKNISVLDIGRP--FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
                  +  + I  +  GR    +P MF+  +  F P      SG  +Q+D+QE L+F+
Sbjct: 54  MKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAP----QFSGY-QQQDSQELLAFL 108

Query: 315 MDQMHDELLKLQG----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSAL 370
           +D +H++L +++     E    NG   A+V+   ++ WE    +N S +           
Sbjct: 109 LDGLHEDLNRVKKKPYLELKDANGRPDAVVA---KEAWENHRLRNDSVIV---------- 155

Query: 371 SDIFGGQLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIE----------------- 412
            D F G  KS +V  +  K S T  PF  L L +  +    +E                 
Sbjct: 156 -DTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEGPMLQPQKKKKTTVALR 214

Query: 413 DALRLFSAPENLEGYRTSSTGNAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLH 471
           D + LF+  E L  +      N      A K   + +L KIL++HL RFSY      KL 
Sbjct: 215 DCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLD 274

Query: 472 KSVRFPLQ 479
             V FP++
Sbjct: 275 TVVEFPIR 282


>gi|327281639|ref|XP_003225554.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Anolis
           carolinensis]
          Length = 370

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 125/286 (43%), Gaps = 45/286 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF +  + L  +  P+     LT         D     
Sbjct: 40  GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKESLLTCLA------DLFHSI 91

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 92  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTVAD-I 139

Query: 323 LKLQGESTSINGA--NTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
           L+ + +    NG   N  + S            +N +++       P+ + +IF G L +
Sbjct: 140 LQEERKQEKQNGRLPNGCIDS------------ENNNSLPD-----PTWVHEIFQGTLTN 182

Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVV 438
             +       S+  + FL L +D+  E   +I   LR FS  E L   Y+          
Sbjct: 183 ETRCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQ 240

Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            A K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 241 EAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 286


>gi|241616763|ref|XP_002408017.1| ubiquitin-specific protease, putative [Ixodes scapularis]
 gi|215502908|gb|EEC12402.1| ubiquitin-specific protease, putative [Ixodes scapularis]
          Length = 351

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 119/284 (41%), Gaps = 44/284 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + + E + R+  +     LT            S  
Sbjct: 25  GLVNFGNTCYCNSVLQALYFCKPFREKVLEYKARN-KRTKETLLTCLADLFH-----SIA 78

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           + KKK  ++       +P  F A L+       N +     Q+DA EFL+++++ + D  
Sbjct: 79  NQKKKTGTI-------APKKFIARLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-- 124

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
                           L   A         P++     + +   P+ + DIF G L +  
Sbjct: 125 ---------------ILQGAATATAAAGTQPQSNPQPHKPE---PTWVHDIFQGTLTNET 166

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+      +I   LR FS  E L   ++           A
Sbjct: 167 RCLNCETVSSKDEDFLDLSVDVSQNT--SITHCLRGFSNTETLCSEHKYYCENCCSKQEA 224

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL 482
           +K ++++ L  IL LHL RF Y  Q +  TKL   V FPL+L L
Sbjct: 225 QKRMRVKKLPMILALHLKRFKYTEQQNRHTKLSYRVVFPLELRL 268


>gi|195058982|ref|XP_001995537.1| GH17708 [Drosophila grimshawi]
 gi|193896323|gb|EDV95189.1| GH17708 [Drosophila grimshawi]
          Length = 847

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 117/283 (41%), Gaps = 45/283 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTRDIPKAGYPTLTAFVGFVSDFDTPS 260
           GL N GN CF+N+ +Q L   +   + L+      R         L  F   + +  T +
Sbjct: 522 GLRNIGNTCFMNSVIQCLSHTTELTRFLRGHNASPRSATSKDQQILHEFAKLIQEMWTTN 581

Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
             S     ++ +++ R FS       LK+   +  N       Q+DAQEFL F +D +H 
Sbjct: 582 VHS-----VTPMELKRAFS-------LKHRMYNDYN-------QQDAQEFLRFFLDSLHS 622

Query: 321 EL-LKLQGESTSI--NGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
            L   ++GE+ +I  N ++     L     WE       S +            D+F GQ
Sbjct: 623 ALNTGVKGETLNIDDNLSDNKKADLT----WEWYARHENSLI-----------RDLFVGQ 667

Query: 378 LKSVVKAQ--GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 435
           LKS +K    GN  S T  PF  L + + S +   +E  L LF   E L+G    +    
Sbjct: 668 LKSTLKCTTCGN-TSVTFDPFWDLSVPLPSSSRCKLESCLDLFIREEVLDGDEMPTCSKC 726

Query: 436 GV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 477
                  KS  IQ   K L++HL RFS      +KL   V FP
Sbjct: 727 KTRRKCTKSFTIQRFPKYLVIHLKRFS--ETRWSKLSNIVEFP 767


>gi|395850175|ref|XP_003797673.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Otolemur
           garnettii]
 gi|335773139|gb|AEH58293.1| ubiquitin carboxyl-terminal hydrolase 1-like protein [Equus
           caballus]
          Length = 370

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 121/284 (42%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF +  + L  +  P+     LT         D     
Sbjct: 40  GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKENLLTCLA------DLFHSI 91

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 92  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 139

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG                +   N  +     +  P+ + +IF G L +  
Sbjct: 140 LQEERKQEKQNGR---------------LPNGNIDSENNNSTPDPTWVHEIFQGTLTNET 184

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 185 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 243 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 286


>gi|73993500|ref|XP_543159.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Canis lupus
           familiaris]
          Length = 370

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 121/284 (42%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF +  + L  +  P+     LT         D     
Sbjct: 40  GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKENLLTCLA------DLFHSI 91

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 92  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 139

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG                +   N  +     +  P+ + +IF G L +  
Sbjct: 140 LQEERKQEKQNGR---------------LPNGNIDSENNNSTPDPTWVHEIFQGTLTNET 184

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 185 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 243 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 286


>gi|355749411|gb|EHH53810.1| hypothetical protein EGM_14513 [Macaca fascicularis]
          Length = 401

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 144/330 (43%), Gaps = 59/330 (17%)

Query: 166 GRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSP 225
           GR  NA+A    I G ++ P   INE           GL+N GN C+ N+ LQAL  C P
Sbjct: 34  GRGTNASALEKDI-GPEQFP---INEHY--------FGLVNFGNTCYCNSVLQALYFCRP 81

Query: 226 FVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLD----IGRPFSPS 281
           F + +   + +   K    T  A        D     +++KK + V+     I R    +
Sbjct: 82  FRENVLAYKAQQKKKENLLTCLA--------DLFHSIATQKKKVGVIPPKKFISRLRKEN 133

Query: 282 MFEAVLKNFT-PDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSING--ANTA 338
             E  +  F  PD+ ++      Q+DA EFL+++++ + D +L+ + +    NG   N  
Sbjct: 134 EPETEITTFCFPDLFDNYM----QQDAHEFLNYLLNTIAD-ILQEEKKQEKQNGKLKNGN 188

Query: 339 LVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFL 397
           +   AE          NK  +T         + +IF G L +  +       S+  + FL
Sbjct: 189 MNEPAE---------NNKPELT--------WVHEIFQGTLTNETRCLNCETVSSKDEDFL 231

Query: 398 LLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGVVTAKKSVKIQTLSKILI 454
            L +D+  E   +I   LR FS  E L   + Y   +  +     A+K ++++ L  IL 
Sbjct: 232 DLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ--EAQKRMRVKKLPMILA 287

Query: 455 LHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
           LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 288 LHLKRFKYMEQLHRYTKLSYRVVFPLELRL 317


>gi|194221795|ref|XP_001492940.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Equus
           caballus]
          Length = 414

 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 121/284 (42%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF +  + L  +  P+     LT         D     
Sbjct: 84  GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKENLLTCLA------DLFHSI 135

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 136 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 183

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG                +   N  +     +  P+ + +IF G L +  
Sbjct: 184 LQEERKQEKQNG---------------RLPNGNIDSENNNSTPDPTWVHEIFQGTLTNET 228

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 229 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 286

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 287 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 330


>gi|335296741|ref|XP_003130951.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Sus scrofa]
          Length = 366

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 120/284 (42%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +  L  +  P+     LT         D     
Sbjct: 36  GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKESLLTCLA------DLFHSI 87

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 88  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 135

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG                +   N        +  P+ + +IF G L +  
Sbjct: 136 LQEERKQEKQNGR---------------LPNGNIDTENNHSTPDPTWVHEIFQGTLTNET 180

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 181 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 238

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 239 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 282


>gi|395520835|ref|XP_003764528.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Sarcophilus
           harrisii]
          Length = 599

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 119/284 (41%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +  L  +  P+     LT          T    
Sbjct: 269 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLADLFHSIAT---- 322

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
             +KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 323 --QKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 368

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG                +   N  +     +  P+ + +IF G L +  
Sbjct: 369 LQEERKQEKQNG---------------RLPNGNIDSENNNSTPDPTWVHEIFQGTLTNET 413

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 414 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 471

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 472 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 515


>gi|315468039|ref|NP_001186800.1| ubiquitin specific peptidase 3 [Danio rerio]
          Length = 524

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 138/315 (43%), Gaps = 57/315 (18%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSD---FDTP 259
           GL N GN CF+NA LQ+L +   F    +EL          P++    G  +    + T 
Sbjct: 164 GLRNLGNTCFMNAILQSLSNIQVFSCYFKEL----------PSVALRSGKTAGRRMYHTR 213

Query: 260 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD--------VPNSISGRPRQEDAQEFL 311
           S G S   ++S+++  R    S+++     F+PD        +  S  G  +Q+DA EFL
Sbjct: 214 SQGDS---SVSLVEEFRKTLCSLWQGSQTAFSPDALFYVIWKIMPSFRGY-QQQDAHEFL 269

Query: 312 SFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 371
            +++D +H E   +QG     NG+ +  V+  E +       ++K  +  T + + S   
Sbjct: 270 RYLLDHLHRE---MQGNK---NGSPSPPVTSDEPNH----ASESKCFINGTSTIVTS--- 316

Query: 372 DIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRLF 418
            +FGG L++ V        S    PFL L LDI ++               T+ D LR F
Sbjct: 317 -VFGGVLQNEVYCLICGTESRKFDPFLDLSLDIPNQFRIKTTKDQEPGPTCTLSDCLRSF 375

Query: 419 SAPENLEGYRTSSTGNAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVR 475
           +  E L+   T           +KS K   IQ L K+L LHL RF + +    K+   V 
Sbjct: 376 TDLEELD--ETELYMCHKCKKRQKSTKKFWIQKLPKVLCLHLKRFHWTAFLRNKVDTYVE 433

Query: 476 FPLQLVLGRDLLVTP 490
           FP+  +  +  L+ P
Sbjct: 434 FPMCGLDMKSYLLEP 448


>gi|109514144|ref|XP_001067099.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 isoform 1
           [Rattus norvegicus]
 gi|392352299|ref|XP_003751173.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Rattus
           norvegicus]
 gi|392354053|ref|XP_577055.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Rattus
           norvegicus]
          Length = 363

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 122/284 (42%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF   +   +++  P+     LT         D     
Sbjct: 36  GLVNFGNTCYCNSILQALYFCRPFRDKVLAYKSQ--PRKKESLLTCLA------DLFHSI 87

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 88  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 135

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG    L +   + E     P             P+ + +IF G L +  
Sbjct: 136 LQEERKQEKQNG---RLRNGDVDSEDNNSTPD------------PTWVHEIFQGTLTNET 180

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 181 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 238

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 239 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 282


>gi|296083782|emb|CBI23999.3| unnamed protein product [Vitis vinifera]
          Length = 892

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 120/288 (41%), Gaps = 60/288 (20%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDFD-T 258
           P GLIN GN CF N  LQ L    P V  LL++   R   +  +  L  F   V     +
Sbjct: 119 PCGLINCGNSCFANVVLQCLAYTRPLVAYLLEKGHRRQCRRNDWCFLCEFQVHVERASHS 178

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P                +PFSP    + L    P +  ++ G  +QEDA EF+ F +D M
Sbjct: 179 P----------------QPFSPINILSRL----PSIGGNL-GYGKQEDAHEFMRFAIDTM 217

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
                                V L E    ++V P ++           + +  IFGG L
Sbjct: 218 QS-------------------VCLDEFGGEKSVHPSSQET---------TLIQHIFGGHL 249

Query: 379 KS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGN 434
           +S V+  + +K S   +  + L ++I+ +A  ++E+ L  F+  E L G   Y+    G 
Sbjct: 250 QSQVICTKCSKISNQYENMMDLTVEIHGDAA-SLEECLDQFTVTEWLHGENMYKCD--GC 306

Query: 435 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 482
              V A K + ++    IL + L RF  G  G  KL+K V FP  L L
Sbjct: 307 NDYVKASKRLTVRHAPNILTIALKRFQSGRFG--KLNKRVTFPETLDL 352


>gi|359476454|ref|XP_002271840.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Vitis
           vinifera]
          Length = 940

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 121/287 (42%), Gaps = 58/287 (20%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDFDTP 259
           P GLIN GN CF N  LQ L    P V  LL++   R   +  +        F+ +F   
Sbjct: 195 PCGLINCGNSCFANVVLQCLAYTRPLVAYLLEKGHRRQCRRNDWC-------FLCEFQVH 247

Query: 260 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
              +S           +PFSP    + L    P +  ++ G  +QEDA EF+ F +D M 
Sbjct: 248 VERASHSP--------QPFSPINILSRL----PSIGGNL-GYGKQEDAHEFMRFAIDTMQ 294

Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
                               V L E    ++V P ++           + +  IFGG L+
Sbjct: 295 S-------------------VCLDEFGGEKSVHPSSQET---------TLIQHIFGGHLQ 326

Query: 380 S-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNA 435
           S V+  + +K S   +  + L ++I+ +A  ++E+ L  F+  E L G   Y+    G  
Sbjct: 327 SQVICTKCSKISNQYENMMDLTVEIHGDAA-SLEECLDQFTVTEWLHGENMYKCD--GCN 383

Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 482
             V A K + ++    IL + L RF  G  G  KL+K V FP  L L
Sbjct: 384 DYVKASKRLTVRHAPNILTIALKRFQSGRFG--KLNKRVTFPETLDL 428


>gi|345319054|ref|XP_001519444.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12
           [Ornithorhynchus anatinus]
          Length = 368

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 122/286 (42%), Gaps = 45/286 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +  L  +  P+     LT         D     
Sbjct: 38  GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLA------DLFHSI 89

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 90  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTVAD-I 137

Query: 323 LKLQGESTSINGA--NTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
           L+ + +    NG   N  L      D      P +           P+ + +IF G L +
Sbjct: 138 LQEERKQEKQNGRLPNGNL------DSENNNSPPD-----------PTWVHEIFQGTLTN 180

Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVV 438
             +       S+  + FL L +D+  E   +I   LR FS  E L   Y+          
Sbjct: 181 ETRCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQ 238

Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            A K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 239 EAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 284


>gi|444318954|ref|XP_004180134.1| hypothetical protein TBLA_0D01070 [Tetrapisispora blattae CBS 6284]
 gi|387513176|emb|CCH60615.1| hypothetical protein TBLA_0D01070 [Tetrapisispora blattae CBS 6284]
          Length = 483

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 39/287 (13%)

Query: 202 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           +GL+N G+ C++++ LQ LM    FV L  +    +  K   P         +      G
Sbjct: 137 KGLVNMGSTCYMSSILQCLMHNPLFVDLSMKGVHYNYCKIQDPMKCMSCAIDNIISETYG 196

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
                 N  ++DI              N +  V  +++G   Q+DA EFL FI++QMH++
Sbjct: 197 NKKTTPNEGLVDI-------------LNCSWRVNKNLAGYT-QQDAHEFLQFILNQMHND 242

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAV----TRTQSFLPSAL-SDIFGG 376
                            L  + + ++ E  G   K+ V    ++    L + L   IF G
Sbjct: 243 Y---------------KLNEIHDTNKQEMNGTDFKTMVNGNSSKEHLHLCNCLPHTIFQG 287

Query: 377 QLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 434
            LKS++     KA +  T+ P++ L LD+  ++  T+ + L  F   E L  +  +    
Sbjct: 288 FLKSIISCSECKAQSQTTIDPYMDLSLDVKGKS--TLYECLESFHRTERLHDFTYNCKKC 345

Query: 435 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQL 480
                A + + I  L+ I+++ L RF +   GS+ K++  V FPL L
Sbjct: 346 NKSQDANRQLSILKLAPIMVIQLKRFEHLITGSSVKINDFVEFPLHL 392


>gi|350535651|ref|NP_001232206.1| putative ubiquitin specific protease 12 [Taeniopygia guttata]
 gi|197127197|gb|ACH43695.1| putative ubiquitin specific protease 12 [Taeniopygia guttata]
          Length = 344

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 127/284 (44%), Gaps = 42/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +  P+     LT         D  +  
Sbjct: 40  GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQ--PRKKESLLTCLS------DLFNSI 91

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D L
Sbjct: 92  ATQKKKVGVI------PPKKFISRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-L 139

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG        +EE +        K  +T         + +IF G L +  
Sbjct: 140 LQEEKKQEKQNGKLQNGSIESEEGD--------KPDLT--------WVHEIFQGTLTNET 183

Query: 383 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +    +A S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 184 RCLNCEAVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEA 241

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
           +K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 242 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 285


>gi|148234990|ref|NP_001080551.1| ubiquitin specific peptidase 8 [Xenopus laevis]
 gi|27697056|gb|AAH43910.1| Usp8-prov protein [Xenopus laevis]
          Length = 1063

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 117/282 (41%), Gaps = 31/282 (10%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++N+ LQ L +     +   +     DI ++        +G   +     G
Sbjct: 724 GLRNLGNTCYMNSILQCLCNTPHLAEYFNKNCYQADINRSN------LLGHKGEVAEEFG 777

Query: 262 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
              K      L  G  +  SP  F+  +      +    +G   Q D+QE L F+MD +H
Sbjct: 778 CIMK-----ALWTGQYKCISPKDFKITIGK----INEQFAGYSHQ-DSQELLLFLMDGLH 827

Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
           ++L K           N  L      D          SA  + +    S +  +F GQ K
Sbjct: 828 EDLNKADNRKRQKEENNDHLSDSQAAD----------SAWYKHKQLNESIIVSLFQGQFK 877

Query: 380 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGV 437
           S V+     K S T + F+ L L + S +  +++D ++ F+  E L +  R   +     
Sbjct: 878 STVQCLTCQKKSRTFEAFMYLSLPLPSTSKCSLKDCIKAFAKEEKLTDSNRFDCSNCKTQ 937

Query: 438 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
             A K ++I  L  IL++HL RFS+  +   KL   V FPL+
Sbjct: 938 RVATKKIEIWKLPPILLVHLKRFSFEGRWRQKLQAYVDFPLE 979


>gi|397495119|ref|XP_003818408.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Pan paniscus]
          Length = 361

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 119/284 (41%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF +  + L  +  P+     LT         D     
Sbjct: 31  GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKESLLTCLA------DLFHSI 82

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D L
Sbjct: 83  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADIL 131

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
                E       N  L +   ++E     P             P+ + +IF G L +  
Sbjct: 132 ----QEERKQEKQNGRLPNGNIDNENNNSTPD------------PTWVHEIFQGTLTNET 175

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 176 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 233

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 234 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 277


>gi|149034864|gb|EDL89584.1| rCG42642 [Rattus norvegicus]
          Length = 364

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 121/284 (42%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF    + L  +  P+     LT         D     
Sbjct: 34  GLVNFGNTCYCNSVLQALYFCRPFRD--KVLAYKSQPRKKESLLTCLA------DLFHSI 85

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 86  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 133

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG    L +   + E     P             P+ + +IF G L +  
Sbjct: 134 LQEERKQEKQNG---RLRNGDVDSEDNNSTPD------------PTWVHEIFQGTLTNET 178

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 179 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 236

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 237 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 280


>gi|148231175|ref|NP_001091528.1| ubiquitin carboxyl-terminal hydrolase 12 [Bos taurus]
 gi|251765091|sp|A5D9H7.1|UBP12_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
           Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
           thioesterase 12; AltName:
           Full=Ubiquitin-specific-processing protease 12
 gi|146231922|gb|ABQ13036.1| ubiquitin-specific protease 12-like 1 [Bos taurus]
 gi|296481741|tpg|DAA23856.1| TPA: ubiquitin carboxyl-terminal hydrolase 12 [Bos taurus]
          Length = 369

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 119/284 (41%), Gaps = 42/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF +  + L  +  P+     LT         D     
Sbjct: 40  GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKESLLTCLA------DLFHSI 91

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 92  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 139

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG                  P          +  P+ + +IF G L +  
Sbjct: 140 LQEERKQEKQNGR----------------LPNGNIDSENNSTPDPTWVHEIFQGTLTNET 183

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 184 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 241

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 242 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 285


>gi|168044470|ref|XP_001774704.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674004|gb|EDQ60519.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 411

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 116/283 (40%), Gaps = 58/283 (20%)

Query: 200 LPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 258
           +P GL+N GN CF N  LQ L    P    LL      D  +  +        F+ +  +
Sbjct: 115 VPCGLLNCGNSCFANVVLQCLTYTRPLTAYLLNGSHEEDCKRNDW-------CFMCELQS 167

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                 + +N        PFSP    + ++N    + N + G  RQEDA EF+ F +D M
Sbjct: 168 HVHNVRQNRN--------PFSPIRILSRIRN----IGNHL-GYGRQEDAHEFMRFAIDSM 214

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
               L   G                E+D    V P  +           + +  IFGG L
Sbjct: 215 QSICLDEFG---------------GEKD----VDPATQET---------TLIHHIFGGHL 246

Query: 379 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGN 434
           +S VK  Q +  S   +  + L ++I+   V ++EDA+  F+  E L+G   Y+      
Sbjct: 247 QSQVKCMQCHHESNRYESMMDLAVEIHG-VVDSLEDAIAQFTTIEMLDGDNKYKCDRCN- 304

Query: 435 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 477
              V A+K + +     +L + L RF  G  G  KL+K V FP
Sbjct: 305 -AYVRARKQLTVYEAPNVLTIALKRFQSGKFG--KLNKRVTFP 344


>gi|432111639|gb|ELK34741.1| Ubiquitin carboxyl-terminal hydrolase 46 [Myotis davidii]
          Length = 370

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 126/288 (43%), Gaps = 49/288 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  A        D     
Sbjct: 40  GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 91

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D +
Sbjct: 92  ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 139

Query: 323 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
           L+ + +    NG   N  +   AE          NK  +T         + +IF G L +
Sbjct: 140 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 182

Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 436
             +       S+  + FL L +D+  E   +I   LR FS  E L   + Y   +  +  
Sbjct: 183 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 240

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
              A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 241 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 286


>gi|344288367|ref|XP_003415922.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Loxodonta
           africana]
          Length = 359

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 126/288 (43%), Gaps = 49/288 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  A        D     
Sbjct: 29  GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 80

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D +
Sbjct: 81  ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 128

Query: 323 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
           L+ + +    NG   N  +   AE          NK  +T         + +IF G L +
Sbjct: 129 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 171

Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 436
             +       S+  + FL L +D+  E   +I   LR FS  E L   + Y   +  +  
Sbjct: 172 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 229

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
              A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 230 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 275


>gi|327281244|ref|XP_003225359.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Anolis
           carolinensis]
          Length = 366

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 124/286 (43%), Gaps = 45/286 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  A        D     
Sbjct: 36  GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 87

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D +
Sbjct: 88  ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTVAD-I 135

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG                 G  N++     Q    + + +IF G L +  
Sbjct: 136 LQEEKKQEKQNGRLRN-------------GNMNETEENNKQDL--TWVHEIFQGTLTNET 180

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGVV 438
           +       S+  + FL L +D+  E   +I   LR FS  E L   + Y   +  +    
Sbjct: 181 RCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ-- 236

Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 237 EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 282


>gi|426232189|ref|XP_004010116.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Ovis aries]
          Length = 384

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 126/288 (43%), Gaps = 49/288 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  A        D     
Sbjct: 54  GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 105

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D +
Sbjct: 106 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 153

Query: 323 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
           L+ + +    NG   N  +   AE          NK  +T         + +IF G L +
Sbjct: 154 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 196

Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 436
             +       S+  + FL L +D+  E   +I   LR FS  E L   + Y   +  +  
Sbjct: 197 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 254

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
              A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 255 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 300


>gi|262205503|ref|NP_001160048.1| ubiquitin carboxyl-terminal hydrolase 12 [Rattus norvegicus]
 gi|262036776|emb|CBH26010.1| ubiquitin specific protease 12 [Rattus norvegicus]
          Length = 370

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 122/284 (42%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF   +   +++  P+     LT         D     
Sbjct: 40  GLVNFGNTCYCNSVLQALYFCRPFRDKVLAYKSQ--PRKKESLLTCLA------DLFHSI 91

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 92  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 139

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG    L +   + E     P             P+ + +IF G L +  
Sbjct: 140 LQEERKQEKQNG---RLRNGDVDSEDNNSTPD------------PTWVHEIFQGTLTNET 184

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 185 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 243 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 286


>gi|195356149|ref|XP_002044543.1| GM11729 [Drosophila sechellia]
 gi|194132165|gb|EDW53792.1| GM11729 [Drosophila sechellia]
          Length = 1022

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 123/284 (43%), Gaps = 48/284 (16%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELR-TRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ +Q L       + L+    +R +       L  F   + +  T   
Sbjct: 698 GLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSLSTKDQQILHEFAKLIQEMWT--- 754

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
             S    ++ +++ R FS                + +     Q+DAQEFL F +D +H  
Sbjct: 755 --SNVHTVTPMELKRAFS--------------TKHRMYSDYNQQDAQEFLRFFLDSLHSA 798

Query: 322 LLK-LQGESTSI--NGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           L   ++GE+ +I  N ++     L    EW T   ++++++ R          D+F GQL
Sbjct: 799 LNSGVKGETLNIDDNLSDNKKADLTW--EWYT---RHENSLVR----------DLFVGQL 843

Query: 379 KSVVKAQ--GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 436
           KS +K    GN  S T  PF  L + + S +   ++  L LF   E L+G    +   A 
Sbjct: 844 KSTLKCTTCGN-TSVTFDPFWDLSVPLPSSSRCKLDACLDLFIREEVLDGDEMPTC--AK 900

Query: 437 VVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 477
             T +K  K   IQ   K L++HL RFS      +KL   V FP
Sbjct: 901 CKTRRKCTKSFTIQRFPKYLVIHLKRFSETRW--SKLSNIVEFP 942


>gi|443706691|gb|ELU02606.1| hypothetical protein CAPTEDRAFT_165719 [Capitella teleta]
          Length = 515

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 128/304 (42%), Gaps = 55/304 (18%)

Query: 197 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF 256
           K L   GL N GN CF+NA LQ+L +   F   +Q+L          P+L   +   S  
Sbjct: 147 KRLRRSGLRNLGNTCFMNAVLQSLSNIQTFCGYIQQL----------PSLEQKM---SKK 193

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR--PR-----QEDAQE 309
              +   ++  ++ V++  R    ++++      +P+   S+  +  PR     Q+DA E
Sbjct: 194 KITTRSCTEGNDVFVVEELRKTLVALWQGSKAAISPESLFSVIWKVVPRFRGYQQQDAHE 253

Query: 310 FLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 369
           F+ +++D++H EL+ L   + ++   N+  V            P  KS+V          
Sbjct: 254 FMRYLLDRLHTELMTLIPYNATVR-PNSPYVG----------SPLGKSSV---------- 292

Query: 370 LSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYS------------EAVHTIEDALR 416
           ++ IFGG L+S V        S    PFL + LDI S            E V  + D L 
Sbjct: 293 VTAIFGGILQSEVNCLICGMESKKHDPFLDISLDIPSKFTCKTPNPKNGEIVCDLSDCLS 352

Query: 417 LFSAPENLEGYRTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVR 475
            F+  E LE        N      + K   I+ L  +L LHL RF + +    K+   + 
Sbjct: 353 SFTDVEELEDTELYMCANCKCRQRSTKKFWIRRLPNVLCLHLKRFRWSTYLRVKVDTHIN 412

Query: 476 FPLQ 479
           FPL+
Sbjct: 413 FPLR 416


>gi|403255383|ref|XP_003920416.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Saimiri
           boliviensis boliviensis]
          Length = 413

 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 123/284 (43%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +  L  +  P+     LT         D     
Sbjct: 83  GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKESLLTCLA------DLFHSI 134

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 135 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 182

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG    L +   ++E     P             P+ + +IF G L +  
Sbjct: 183 LQEERKQEKQNG---RLPNGNIDNENNNSTPD------------PTWVHEIFQGTLTNET 227

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 228 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 285

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 286 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 329


>gi|261335509|emb|CBH18503.1| ubiquitin carboxyl-terminal hydrolase, putative [Trypanosoma brucei
           gambiense DAL972]
          Length = 442

 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 136/293 (46%), Gaps = 32/293 (10%)

Query: 200 LPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT- 258
           + +G++N  N CF+NA LQA++   P  QL+      ++     PTL+A   ++  + T 
Sbjct: 88  IAKGIVNRTNSCFMNAMLQAIIFTPPLAQLIISASDSEL----CPTLSALGKWMLSYWTK 143

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P+  S     +SV       + S  E V   +   +   ++G   QEDA EFL  ++D +
Sbjct: 144 PANQSISPPQLSV-------AQSANEGVASTYL--LLARMNGYA-QEDALEFLQHLLDTI 193

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSD-IFGGQ 377
           + EL  L+      +  N A +   +E  W  V  + + ++   ++   S L D +FGG 
Sbjct: 194 NTELCSLEK-----HYCNRAAIDSGDEKGWTFVHGRERRSLREEKTGPHSILLDAVFGGT 248

Query: 378 LKSVVKAQG---NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 434
           ++S +K +    + AS  +  F +L +D+   A  T+E+AL        L+  +      
Sbjct: 249 IQSHLKGKSRVRSHASVVLDRFFVLQVDVGFNAECTLEEALE-----RTLQTEKVYDDSR 303

Query: 435 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS-TKLHKSVRFPLQLVLGRDL 486
           A  +   K++K+  L  +L   L R+   ++G   KL   VRF   LVL + +
Sbjct: 304 AKDLV--KTMKLHQLPLVLFAQLRRWVVTAEGELVKLDNIVRFGKTLVLPKSI 354


>gi|426236775|ref|XP_004012342.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Ovis aries]
          Length = 486

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 116/284 (40%), Gaps = 42/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF   +  L  +  P+     LT          T    
Sbjct: 157 GLVNFGNTCYCNSVLQALYFCRPFRDKV--LAYKSQPRKKESLLTCLADLFHSIAT---- 210

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
             +KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 211 --QKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 256

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG                  P          +  P+ + +IF G L +  
Sbjct: 257 LQEERKQEKQNGR----------------LPNGNIDSENNSTPDPTWVHEIFQGTLTNET 300

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 301 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 358

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 359 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 402


>gi|302696891|ref|XP_003038124.1| hypothetical protein SCHCODRAFT_37924 [Schizophyllum commune H4-8]
 gi|300111821|gb|EFJ03222.1| hypothetical protein SCHCODRAFT_37924, partial [Schizophyllum
           commune H4-8]
          Length = 314

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 113/274 (41%), Gaps = 58/274 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL N+GN CF+N+ LQ L    P ++LL    ++D  K+    +T  + + +     S  
Sbjct: 17  GLFNTGNTCFMNSALQCLFHTPPLLRLLSA-HSKDTCKSSGFCMTCCMKYTAMRSQSSNK 75

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           S+             F+P      LK F   +        RQED+ EFL   ++ +    
Sbjct: 76  SA-------------FNPDGITRNLKAFAKSLRYG-----RQEDSHEFLRHAIEGLQRSC 117

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L  Q +      A T+ V                                +FGGQL+S V
Sbjct: 118 LAGQPQKVDPKLAETSWVH------------------------------QLFGGQLRSRV 147

Query: 383 KAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGVV 438
             +G    S T    L L LDI+  +  +++DAL+ F AP+ L+G   Y+         V
Sbjct: 148 HCKGCGHNSDTYDSILDLSLDIHRTS--SLKDALKSFVAPDYLKGSDKYKCDHCKK--YV 203

Query: 439 TAKKSVKIQTLSKILILHLMRFS-YGSQGSTKLH 471
            A+K   I     +L +HL RFS +GS+ +  LH
Sbjct: 204 NAEKRFTINKAPLVLTIHLKRFSPFGSKLTNLLH 237


>gi|197116355|ref|NP_001127695.1| ubiquitin carboxyl-terminal hydrolase 46 isoform 2 [Homo sapiens]
 gi|114594805|ref|XP_001148401.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 1 [Pan
           troglodytes]
 gi|301768068|ref|XP_002919453.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like
           [Ailuropoda melanoleuca]
 gi|332238468|ref|XP_003268420.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 2
           [Nomascus leucogenys]
 gi|397469742|ref|XP_003806502.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Pan paniscus]
 gi|402869827|ref|XP_003898947.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 2
           [Papio anubis]
 gi|403284661|ref|XP_003933679.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Saimiri
           boliviensis boliviensis]
 gi|426344311|ref|XP_004038717.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 2
           [Gorilla gorilla gorilla]
 gi|221044064|dbj|BAH13709.1| unnamed protein product [Homo sapiens]
          Length = 359

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 126/288 (43%), Gaps = 49/288 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  A        D     
Sbjct: 29  GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 80

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D +
Sbjct: 81  ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 128

Query: 323 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
           L+ + +    NG   N  +   AE          NK  +T         + +IF G L +
Sbjct: 129 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 171

Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 436
             +       S+  + FL L +D+  E   +I   LR FS  E L   + Y   +  +  
Sbjct: 172 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 229

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
              A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 230 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 275


>gi|441624164|ref|XP_003270353.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Nomascus
           leucogenys]
 gi|3220154|gb|AAC23551.1| ubiquitin hydrolyzing enzyme I [Homo sapiens]
          Length = 355

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 119/284 (41%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF +  + L  +  P+     LT         D     
Sbjct: 25  GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKESLLTCLA------DLFHSI 76

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D L
Sbjct: 77  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADIL 125

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
                E       N  L +   ++E     P             P+ + +IF G L +  
Sbjct: 126 ----QEERKQEKQNGRLPNGNIDNENNNSTPD------------PTWVHEIFQGTLTNET 169

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 170 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 227

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 228 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 271


>gi|344240807|gb|EGV96910.1| Ubiquitin carboxyl-terminal hydrolase 2 [Cricetulus griseus]
          Length = 379

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 123/295 (41%), Gaps = 56/295 (18%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL+ +   CF+N+ LQ L +        LQ L  RD+   G+ T  A    + +F     
Sbjct: 42  GLLLNKAKCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSNAHTALMEEF----- 92

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 93  ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 143

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP---SALSDIFG 375
           H+E+             N   V      E     P ++      + +L    S + D+F 
Sbjct: 144 HNEV-------------NRVTVRPKPSPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFV 190

Query: 376 GQLKSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG---- 426
           GQLKS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G    
Sbjct: 191 GQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKP 248

Query: 427 --YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
             YR  +          K   +Q   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 249 TCYRCRARKRC-----IKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 298


>gi|341875422|gb|EGT31357.1| hypothetical protein CAEBREN_29462 [Caenorhabditis brenneri]
          Length = 551

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 124/302 (41%), Gaps = 57/302 (18%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPS 260
           PRG+ N GN CF+NA LQAL S + FV  +  L          P L  ++   S  +   
Sbjct: 231 PRGMRNLGNTCFMNAVLQALGSITEFVDYIMTL----------PPLEDYMEEASGKNGNC 280

Query: 261 GGSSKKKNI----SVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
             + + + +    SV +   P +P  F     +    V     G  RQ DA EF+ +++D
Sbjct: 281 YLTDEYRKLLHTMSVRNFREPCNPGPFREAFVS----VCTRFRGF-RQHDAHEFMKYLLD 335

Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
           QMH EL K +            L  + E+D  E V P                LS  F G
Sbjct: 336 QMHTELKKCKN-----------LPEMPEDD--EKVTP----------------LSRHFEG 366

Query: 377 QLKSVVKAQ--GNKASATVQPFLLLHLDI--YSEAVHTIEDALRLFSAPENLE-GYRTSS 431
            L+S V  Q  GN  S  +  F  L LDI   S+    + D L  F   E LE G +   
Sbjct: 367 MLQSSVVCQVCGN-CSNKLDEFWDLSLDIPRISKPRIRLSDCLSDFFKKEILEKGDKPMC 425

Query: 432 TGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPS 491
           +      T  K + I+ L ++L L + RF     G  K+   + FP+Q +   + L   S
Sbjct: 426 SKCNTKQTCSKQLFIKKLPEVLCLQIKRF---KDGGGKIDTLIEFPMQSLSVDEFLTEDS 482

Query: 492 AE 493
            E
Sbjct: 483 DE 484


>gi|19913514|gb|AAH26072.1| Ubiquitin specific peptidase 12 [Homo sapiens]
 gi|123994797|gb|ABM85000.1| ubiquitin specific peptidase 12 [synthetic construct]
          Length = 370

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 119/284 (41%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF +  + L  +  P+     LT         D     
Sbjct: 40  GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKESLLTCLA------DLFHSI 91

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D L
Sbjct: 92  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADIL 140

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
                E       N  L +   ++E     P             P+ + +IF G L +  
Sbjct: 141 ----QEERKQEKQNGRLPNGNIDNENNNSTPD------------PTWVDEIFQGTLTNET 184

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 185 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 243 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 286


>gi|390460899|ref|XP_002745872.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Callithrix
           jacchus]
          Length = 359

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 126/288 (43%), Gaps = 49/288 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  A        D     
Sbjct: 29  GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 80

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D +
Sbjct: 81  ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 128

Query: 323 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
           L+ + +    NG   N  +   AE          NK  +T         + +IF G L +
Sbjct: 129 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 171

Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 436
             +       S+  + FL L +D+  E   +I   LR FS  E L   + Y   +  +  
Sbjct: 172 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 229

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
              A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 230 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 275


>gi|393216033|gb|EJD01524.1| cysteine proteinase [Fomitiporia mediterranea MF3/22]
          Length = 775

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 131/330 (39%), Gaps = 90/330 (27%)

Query: 173 ACNSSISGSKEVPMKAINEPVKSVKDLLPR--------------GLINSGNLCFLNATLQ 218
           A N S + +K  P K     +K  + L  R              GL N GN CFLN+ LQ
Sbjct: 136 ALNESQTAAKSTPTKKYQSELKVQQSLYTRSIDLSWPAGIVHGSGLFNQGNTCFLNSALQ 195

Query: 219 ALMSCSPFVQLLQ-----ELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLD 273
            L+   P +++L      E R     K+G+    A     SD       S KK       
Sbjct: 196 CLLHTPPLLRILMAHTKAECRV----KSGFCMSCAMQEVSSD-------SFKK------- 237

Query: 274 IGRPFSPSMFEAVLKNFTPDVPNSISG---RPRQEDAQEFLSFIMDQMHDELLKLQGEST 330
            GR F+P     + +N      NSI+    + RQEDA EFL + +D +         + +
Sbjct: 238 -GRAFTPL---PITRNL-----NSIAKHLRKGRQEDAHEFLRYAIDSL---------QKS 279

Query: 331 SINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKA 389
            + G    +     E  W                     +  IFGGQL+S V   Q    
Sbjct: 280 CLAGYPPKIDHKLAETTW---------------------VHKIFGGQLRSRVTCQQCGYN 318

Query: 390 SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGVVTAKKSVKI 446
           S T    L L +DIY+  +  +++AL+ F+A + L+G   Y+         V A+K   I
Sbjct: 319 SDTFDSILDLSIDIYN--ISGLKEALKKFTAKDYLKGADKYKCEKCKRP--VNAEKQFTI 374

Query: 447 QTLSKILILHLMRFSYGSQGSTKLHKSVRF 476
                +L +HL RF+   +   KL   +R+
Sbjct: 375 HEAPAVLTVHLKRFTPMGR---KLQHPIRY 401


>gi|335293447|ref|XP_003129021.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Sus scrofa]
          Length = 376

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 126/288 (43%), Gaps = 49/288 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  A        D     
Sbjct: 46  GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 97

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D +
Sbjct: 98  ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 145

Query: 323 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
           L+ + +    NG   N  +   AE          NK  +T         + +IF G L +
Sbjct: 146 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 188

Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 436
             +       S+  + FL L +D+  E   +I   LR FS  E L   + Y   +  +  
Sbjct: 189 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 246

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
              A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 247 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 292


>gi|326914260|ref|XP_003203444.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Meleagris
           gallopavo]
          Length = 359

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 137/325 (42%), Gaps = 58/325 (17%)

Query: 164 IDGRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSC 223
           ++G   NA+A    I G ++ P   +NE           GL+N GN C+ N+ LQAL  C
Sbjct: 3   VEGEGANASALEKEI-GPEQFP---VNEHY--------FGLVNFGNTCYCNSVLQALYFC 50

Query: 224 SPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMF 283
            PF   +  L  +  P+     LT         D     +++KK + V+       P  F
Sbjct: 51  RPFRDKV--LAYKSQPRKKENLLTCLA------DLFHSIATQKKKVGVI------PPKKF 96

Query: 284 EAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGA--NTALVS 341
              L+       N +     Q+DA EFL+++++ + D +L+ + +    NG   N  + +
Sbjct: 97  ITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-ILQEERKQEKQNGRLPNGNIDN 150

Query: 342 LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLH 400
                  E   P +           P+ + +IF G L +  +       S+  + FL L 
Sbjct: 151 -------ENNSPPD-----------PTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLS 192

Query: 401 LDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMR 459
           +D+  E   +I   LR FS  E L   Y+           A K +K++ L  IL LHL R
Sbjct: 193 VDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKR 250

Query: 460 FSYGSQ--GSTKLHKSVRFPLQLVL 482
           F Y  Q    TKL   V FPL+L L
Sbjct: 251 FKYMDQLHRYTKLSYRVVFPLELRL 275


>gi|302142049|emb|CBI19252.3| unnamed protein product [Vitis vinifera]
          Length = 841

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 121/291 (41%), Gaps = 59/291 (20%)

Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDF 256
           +L P GL+N GN C+ NA LQ L    P     LQ L ++   K  +     F   +   
Sbjct: 467 ELRPCGLMNCGNSCYANAVLQCLAFTPPLTSYFLQGLHSKSCLKKEWCFTCEFESLI--L 524

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
               G S             P SP    + ++N    +     G  ++EDA EFL + +D
Sbjct: 525 KAKEGNS-------------PLSPLGILSQIRNIGSHL-----GNGKEEDAHEFLRYAID 566

Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
            M    LK  G    +N +     SL EE                      S +   FGG
Sbjct: 567 AMQSVCLKEAG----VNASG----SLEEET---------------------SLIGLTFGG 597

Query: 377 QLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSST 432
            L+S +K  + +  S   +  + L ++I  + + T+E+AL  F++ E L+G   Y+ S  
Sbjct: 598 YLRSKIKCMKCHGKSERHERMMDLTVEIEGD-IGTLEEALHKFTSTEILDGENKYQCSRC 656

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLG 483
            +     AKK + +     IL + L RF  G  G  KL+KS+RFP  L L 
Sbjct: 657 KS--YEKAKKKLTVSEAPNILTIALKRFQSGKFG--KLNKSIRFPEILDLA 703


>gi|321475285|gb|EFX86248.1| hypothetical protein DAPPUDRAFT_308438 [Daphnia pulex]
          Length = 376

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 131/297 (44%), Gaps = 46/297 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + + E + ++  K    TL   +      D     
Sbjct: 25  GLVNFGNTCYSNSVLQALYFCKPFREKVLEYKMKN--KRSKETLLTCLA-----DLFHNI 77

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK +  +      +P  F A LK    +  N +     Q+DA EFL+F+++ +  E+
Sbjct: 78  TTQKKKVGTI------APKKFIARLKKEKEEFDNYM-----QQDAHEFLNFLINHI-SEI 125

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSA----------VTRTQSFLPSALSD 372
           +  +   T+ +   T    +    +     P N SA          +T T +   + + +
Sbjct: 126 ITAERHQTNNSATPTTNGKVQNSKD-----PCNGSASLKFDGSNGSMTSTGNHESTWVHE 180

Query: 373 IFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSS 431
           IF G L S  +       S   + F  L +D+      +I   LR FS+ E L    T +
Sbjct: 181 IFQGILTSETRCLNCETVSNKEEDFFDLQVDVDQNT--SITHCLRTFSSTETL---CTDN 235

Query: 432 TGNAGVVT----AKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL 482
                V +    A+K ++++ L  IL LHL RF Y  Q +   K+   V FPL+L L
Sbjct: 236 KFKCDVCSSYQEAQKCMRVKKLPLILALHLKRFKYVEQYNRHIKVSHRVVFPLELRL 292


>gi|358055232|dbj|GAA99001.1| hypothetical protein E5Q_05690 [Mixia osmundae IAM 14324]
          Length = 601

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 116/288 (40%), Gaps = 58/288 (20%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAF--VGFVSDFDTPS 260
           G  N GN CFLN+ LQ L+  +P V  L                + F  V  + D     
Sbjct: 176 GFNNVGNTCFLNSALQVLVHTAPLVSALTGTHWHSERTCYLTGRSQFCLVCVMQDLINRC 235

Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
            G S+           P +P  F   LK              RQED+ E L F++D M  
Sbjct: 236 FGQSRS----------PLTPRGFTDNLKRIAKHFRLG-----RQEDSHELLRFVIDGM-- 278

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                                  ++ E   V P    A   T     + +  IFGG+L+S
Sbjct: 279 -----------------------QQHELAGVPPDALKARRDT-----TMIHRIFGGKLRS 310

Query: 381 -VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            V+  +   AS T + FL L LDI  + +  + DALR F  P++L G   Y+  +     
Sbjct: 311 RVLCNKCGHASDTFESFLDLSLDI--QGLDHLRDALRRFFQPDDLRGQNKYKCEACTR-- 366

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGR 484
           +V A K   IQ+  ++L LHL RF+   +   K+ +S+ F   L LGR
Sbjct: 367 MVEATKQYTIQSPPQVLTLHLKRFTPLGK---KIGRSIGFDEDLNLGR 411


>gi|301500675|ref|NP_872294.2| ubiquitin carboxyl-terminal hydrolase 12 [Homo sapiens]
 gi|296203592|ref|XP_002748984.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Callithrix
           jacchus]
 gi|332841062|ref|XP_001135418.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Pan
           troglodytes]
 gi|402901626|ref|XP_003913746.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Papio anubis]
 gi|118572732|sp|O75317.2|UBP12_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
           Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
           thioesterase 12; AltName: Full=Ubiquitin-hydrolyzing
           enzyme 1; AltName: Full=Ubiquitin-specific-processing
           protease 12
 gi|119628797|gb|EAX08392.1| ubiquitin specific peptidase 12, isoform CRA_a [Homo sapiens]
 gi|158260393|dbj|BAF82374.1| unnamed protein product [Homo sapiens]
 gi|380810518|gb|AFE77134.1| ubiquitin carboxyl-terminal hydrolase 12 [Macaca mulatta]
 gi|383416533|gb|AFH31480.1| ubiquitin carboxyl-terminal hydrolase 12 [Macaca mulatta]
 gi|384945814|gb|AFI36512.1| ubiquitin carboxyl-terminal hydrolase 12 [Macaca mulatta]
 gi|410219534|gb|JAA06986.1| ubiquitin specific peptidase 12 [Pan troglodytes]
 gi|410266420|gb|JAA21176.1| ubiquitin specific peptidase 12 [Pan troglodytes]
 gi|410292612|gb|JAA24906.1| ubiquitin specific peptidase 12 [Pan troglodytes]
 gi|410355297|gb|JAA44252.1| ubiquitin specific peptidase 12 [Pan troglodytes]
          Length = 370

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 119/284 (41%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF +  + L  +  P+     LT         D     
Sbjct: 40  GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKESLLTCLA------DLFHSI 91

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D L
Sbjct: 92  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADIL 140

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
                E       N  L +   ++E     P             P+ + +IF G L +  
Sbjct: 141 ----QEERKQEKQNGRLPNGNIDNENNNSTPD------------PTWVHEIFQGTLTNET 184

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 185 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 243 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 286


>gi|312376797|gb|EFR23784.1| hypothetical protein AND_12248 [Anopheles darlingi]
          Length = 379

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 134/289 (46%), Gaps = 29/289 (10%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + + E + ++  +    TL + +      D     
Sbjct: 25  GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKN--RRTKETLLSCLA-----DLFYSI 77

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK +  +      +P  F A L+    +  N +     Q+DA EFL+F+++ +++ +
Sbjct: 78  ATQKKKVGSI------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 126

Query: 323 LKLQGESTSINGANTALVSLAEEDEWE--TVG---PKNKSAVTRTQSFLPSALSDIFGGQ 377
           L  + ++ +  G  ++  S       +  ++G   P++ S      +  P+ + +IF G 
Sbjct: 127 LAERNQAKAAGGKGSSSSSSGNGTAGQNGSLGPGTPQDGSGGVAGNNTEPTWVHEIFQGI 186

Query: 378 LKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN-A 435
           L S  +       S+  + F  L +D+  +   +I   LR FS  E L         N  
Sbjct: 187 LTSETRCLNCETVSSKDENFFDLQVDV--DQNTSITHCLRCFSNTETLCSDNKFKCDNCC 244

Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL 482
               A+K ++++ L  IL LHL RF Y  Q +   K+   V FPL+L L
Sbjct: 245 SYQEAQKRMRVKKLPMILALHLKRFKYMEQYNRHIKVSHRVVFPLELRL 293


>gi|281352654|gb|EFB28238.1| hypothetical protein PANDA_008082 [Ailuropoda melanoleuca]
 gi|351697652|gb|EHB00571.1| Ubiquitin carboxyl-terminal hydrolase 46, partial [Heterocephalus
           glaber]
          Length = 354

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 126/288 (43%), Gaps = 49/288 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  A        D     
Sbjct: 24  GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 75

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D +
Sbjct: 76  ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 123

Query: 323 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
           L+ + +    NG   N  +   AE          NK  +T         + +IF G L +
Sbjct: 124 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 166

Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 436
             +       S+  + FL L +D+  E   +I   LR FS  E L   + Y   +  +  
Sbjct: 167 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 224

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
              A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 225 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 270


>gi|194897797|ref|XP_001978724.1| GG19743 [Drosophila erecta]
 gi|190650373|gb|EDV47651.1| GG19743 [Drosophila erecta]
          Length = 1414

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 119/282 (42%), Gaps = 44/282 (15%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLLQELR-TRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN CF+N+ +Q L       + L+    +R         L  F   + +  T   
Sbjct: 1090 GLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSSATKDQQILHEFAKLIQEMWT--- 1146

Query: 262  GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
              S    ++ +++ R FS                + +     Q+DAQEFL F +D +H  
Sbjct: 1147 --SNVHTVTPMELKRAFS--------------TKHRMYSDYNQQDAQEFLRFFLDSLHSA 1190

Query: 322  LLK-LQGESTSI--NGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
            L   ++GE+ +I  N ++     L    EW T   ++++++ R          D+F GQL
Sbjct: 1191 LNSGVKGETLNIDDNLSDNKKADLTW--EWYT---RHENSLVR----------DLFVGQL 1235

Query: 379  KSVVKAQ--GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 436
            KS +K    GN  S T  PF  L + + S +   +E  L LF   E L+G    +     
Sbjct: 1236 KSTLKCTTCGN-TSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREEVLDGDEMPTCAKCK 1294

Query: 437  V-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 477
                  KS  IQ   K L++HL RFS      +KL   V FP
Sbjct: 1295 TRRKCTKSFTIQRFPKYLVIHLKRFSETRW--SKLSNIVEFP 1334


>gi|224063313|ref|XP_002301091.1| predicted protein [Populus trichocarpa]
 gi|222842817|gb|EEE80364.1| predicted protein [Populus trichocarpa]
          Length = 1095

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 117/289 (40%), Gaps = 55/289 (19%)

Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDF 256
           ++ P GLIN GN C+ NA LQ L    P     +Q L ++   K           F  +F
Sbjct: 554 EMRPCGLINCGNSCYANAVLQCLAFTPPLTSYFVQGLHSKACVKKER-------CFSCEF 606

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
           +        K  +   +   P SP    + L+N    +     G  R+EDA EFL + +D
Sbjct: 607 E--------KVILKAKEGKSPLSPIGILSQLQNIGSQL-----GNGREEDAHEFLRYAID 653

Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
            M    LK       +N  ++       E+E   +G                     FGG
Sbjct: 654 AMQSVCLK----EARVNAVDSF------EEEATLIGL-------------------TFGG 684

Query: 377 QLKSVVKAQGNKASATVQPFLL-LHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 435
            L+S +K       +  Q  ++ L ++I  + +  +EDALR F+  E L+G      G  
Sbjct: 685 YLRSKIKCMKCHYKSEWQERMMDLTVEIEGD-IGKLEDALRRFTGTEILDGDNKYQCGRC 743

Query: 436 -GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLG 483
                AKK + I     +L + L RF  G  G  KL+KS+RFP  L L 
Sbjct: 744 RSYEKAKKKLTILEAPNVLTIALKRFQSGKFG--KLNKSIRFPEILDLA 790


>gi|51971603|dbj|BAD44466.1| unknown protein [Arabidopsis thaliana]
          Length = 631

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 121/292 (41%), Gaps = 62/292 (21%)

Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDF 256
           +L P GL+N GN CF N  LQ L    P V  LL++   R+  +  +        F+ +F
Sbjct: 164 ELAPCGLMNCGNSCFANVILQCLSWTRPLVAYLLEKGHKRECMRNDW-------CFLCEF 216

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
            T    +S+ +         PFSP    + L N    +     G  RQEDA EF+ + +D
Sbjct: 217 QTHVERASQSRF--------PFSPMNIISRLTNIGGTL-----GYGRQEDAHEFMRYAID 263

Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEW--ETVGPKNKSAVTRTQSFLPSALSDIF 374
            M    L                      DE+  E + P      T  Q         IF
Sbjct: 264 MMQSVCL----------------------DEFGGEKIVPPRSQETTLIQY--------IF 293

Query: 375 GGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTS 430
           GG L+S V+    N  S   +  + L ++++ +A  ++E+ L  F+A E L G   Y+  
Sbjct: 294 GGLLQSQVQCTVCNHVSDQYENMMDLIVEMHGDA-GSLEECLDQFTAEEWLHGDNMYKCD 352

Query: 431 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 482
              +   V A K + I+    IL + L R+  G  G  KL+K + FP  L L
Sbjct: 353 RCSD--YVKACKRLTIRRAPNILTIALKRYQGGRYG--KLNKRISFPETLDL 400


>gi|15236036|ref|NP_194895.1| ubiquitin carboxyl-terminal hydrolase 18 [Arabidopsis thaliana]
 gi|166201351|sp|Q67XW5.2|UBP18_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 18; AltName:
           Full=Deubiquitinating enzyme 18; Short=AtUBP18; AltName:
           Full=Ubiquitin thioesterase 18; AltName:
           Full=Ubiquitin-specific-processing protease 18
 gi|3281861|emb|CAA19756.1| putative protein [Arabidopsis thaliana]
 gi|7270070|emb|CAB79885.1| putative protein [Arabidopsis thaliana]
 gi|23296513|gb|AAN13075.1| unknown protein [Arabidopsis thaliana]
 gi|332660543|gb|AEE85943.1| ubiquitin carboxyl-terminal hydrolase 18 [Arabidopsis thaliana]
          Length = 631

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 121/292 (41%), Gaps = 62/292 (21%)

Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDF 256
           +L P GL+N GN CF N  LQ L    P V  LL++   R+  +  +        F+ +F
Sbjct: 164 ELAPCGLMNCGNSCFANVILQCLSWTRPLVAYLLEKGHKRECMRNDW-------CFLCEF 216

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
            T    +S+ +         PFSP    + L N    +     G  RQEDA EF+ + +D
Sbjct: 217 QTHVERASQSRF--------PFSPMNIISRLTNIGGTL-----GYGRQEDAHEFMRYAID 263

Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEW--ETVGPKNKSAVTRTQSFLPSALSDIF 374
            M    L                      DE+  E + P      T  Q         IF
Sbjct: 264 MMQSVCL----------------------DEFGGEKIVPPRSQETTLIQY--------IF 293

Query: 375 GGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTS 430
           GG L+S V+    N  S   +  + L ++++ +A  ++E+ L  F+A E L G   Y+  
Sbjct: 294 GGLLQSQVQCTVCNHVSDQYENMMDLIVEMHGDA-GSLEECLDQFTAEEWLHGDNMYKCD 352

Query: 431 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 482
              +   V A K + I+    IL + L R+  G  G  KL+K + FP  L L
Sbjct: 353 RCSD--YVKACKRLTIRRAPNILTIALKRYQGGRYG--KLNKRISFPETLDL 400


>gi|301624586|ref|XP_002941584.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-A-like [Xenopus
           (Silurana) tropicalis]
          Length = 380

 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 120/284 (42%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF +  + L  +  P+     LT         D     
Sbjct: 50  GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKENLLTCLA------DLFHSI 101

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 102 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 149

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG                +   N        +  P+ + +IF G L +  
Sbjct: 150 LQEERKQEKQNGR---------------IPNGNIDNENNNSTPDPTWVHEIFQGTLTNET 194

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 195 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 252

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 253 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 296


>gi|51969076|dbj|BAD43230.1| unknown protein [Arabidopsis thaliana]
          Length = 631

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 121/292 (41%), Gaps = 62/292 (21%)

Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDF 256
           +L P GL+N GN CF N  LQ L    P V  LL++   R+  +  +        F+ +F
Sbjct: 164 ELAPCGLMNCGNSCFANVILQCLSWTRPLVAYLLEKGHKRECMRNDW-------CFLCEF 216

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
            T    +S+ +         PFSP    + L N    +     G  RQEDA EF+ + +D
Sbjct: 217 QTHVERASQSRF--------PFSPMNIISRLTNIGGTL-----GYGRQEDAHEFMRYAID 263

Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEW--ETVGPKNKSAVTRTQSFLPSALSDIF 374
            M    L                      DE+  E + P      T  Q         IF
Sbjct: 264 MMQSVCL----------------------DEFGGEKIVPPRSQETTLIQY--------IF 293

Query: 375 GGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTS 430
           GG L+S V+    N  S   +  + L ++++ +A  ++E+ L  F+A E L G   Y+  
Sbjct: 294 GGLLQSQVQCTVCNHVSDQYENMMDLIVEMHGDA-GSLEECLDQFTAEEWLHGDNMYKCD 352

Query: 431 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 482
              +   V A K + I+    IL + L R+  G  G  KL+K + FP  L L
Sbjct: 353 RCSD--YVKACKRLTIRRAPNILTIALKRYQGGRYG--KLNKRISFPETLDL 400


>gi|29243896|ref|NP_808229.1| ubiquitin carboxyl-terminal hydrolase 46 [Mus musculus]
 gi|31377709|ref|NP_073743.2| ubiquitin carboxyl-terminal hydrolase 46 isoform 1 [Homo sapiens]
 gi|197097492|ref|NP_001127337.1| ubiquitin carboxyl-terminal hydrolase 46 [Pongo abelii]
 gi|329112531|ref|NP_001179373.2| ubiquitin carboxyl-terminal hydrolase 46 [Bos taurus]
 gi|388454621|ref|NP_001253892.1| ubiquitin carboxyl-terminal hydrolase 46 [Macaca mulatta]
 gi|114594803|ref|XP_517296.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 2 [Pan
           troglodytes]
 gi|332238466|ref|XP_003268419.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 1
           [Nomascus leucogenys]
 gi|402869825|ref|XP_003898946.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 1
           [Papio anubis]
 gi|426344309|ref|XP_004038716.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 1
           [Gorilla gorilla gorilla]
 gi|49065850|sp|P62068.1|UBP46_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 46; AltName:
           Full=Deubiquitinating enzyme 46; AltName: Full=Ubiquitin
           thioesterase 46; AltName:
           Full=Ubiquitin-specific-processing protease 46
 gi|49065851|sp|P62069.1|UBP46_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 46; AltName:
           Full=Deubiquitinating enzyme 46; AltName: Full=Ubiquitin
           thioesterase 46; AltName:
           Full=Ubiquitin-specific-processing protease 46
 gi|75055084|sp|Q5RBQ4.1|UBP46_PONAB RecName: Full=Ubiquitin carboxyl-terminal hydrolase 46; AltName:
           Full=Deubiquitinating enzyme 46; AltName: Full=Ubiquitin
           thioesterase 46; AltName:
           Full=Ubiquitin-specific-processing protease 46
 gi|10436670|dbj|BAB14881.1| unnamed protein product [Homo sapiens]
 gi|22902225|gb|AAH37574.1| Ubiquitin specific peptidase 46 [Homo sapiens]
 gi|25059082|gb|AAH39916.1| Ubiquitin specific peptidase 46 [Mus musculus]
 gi|55728112|emb|CAH90806.1| hypothetical protein [Pongo abelii]
 gi|74208300|dbj|BAE26353.1| unnamed protein product [Mus musculus]
 gi|119625840|gb|EAX05435.1| ubiquitin specific peptidase 46, isoform CRA_b [Homo sapiens]
 gi|124000509|gb|ABM87763.1| ubiquitin specific peptidase 46 [synthetic construct]
 gi|157928604|gb|ABW03598.1| ubiquitin specific peptidase 46 [synthetic construct]
 gi|319433467|gb|ADV57651.1| ubiquitin specific protease 46 [Homo sapiens]
 gi|380783867|gb|AFE63809.1| ubiquitin carboxyl-terminal hydrolase 46 isoform 1 [Macaca mulatta]
 gi|384943090|gb|AFI35150.1| ubiquitin carboxyl-terminal hydrolase 46 isoform 1 [Macaca mulatta]
 gi|410210120|gb|JAA02279.1| ubiquitin specific peptidase 46 [Pan troglodytes]
 gi|410254346|gb|JAA15140.1| ubiquitin specific peptidase 46 [Pan troglodytes]
 gi|410289942|gb|JAA23571.1| ubiquitin specific peptidase 46 [Pan troglodytes]
 gi|410342789|gb|JAA40341.1| ubiquitin specific peptidase 46 [Pan troglodytes]
 gi|417399762|gb|JAA46868.1| Putative ubiquitin carboxyl-terminal hydrolase 46 [Desmodus
           rotundus]
          Length = 366

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 126/288 (43%), Gaps = 49/288 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  A        D     
Sbjct: 36  GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 87

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D +
Sbjct: 88  ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 135

Query: 323 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
           L+ + +    NG   N  +   AE          NK  +T         + +IF G L +
Sbjct: 136 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 178

Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 436
             +       S+  + FL L +D+  E   +I   LR FS  E L   + Y   +  +  
Sbjct: 179 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 236

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
              A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 237 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 282


>gi|395745204|ref|XP_003780559.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 12 [Pongo abelii]
          Length = 362

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 118/283 (41%), Gaps = 38/283 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF +  + L  +  P+     LT         D     
Sbjct: 31  GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKESLLTCLA------DLFHSI 82

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D L
Sbjct: 83  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADIL 131

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
                E       N  L +   ++E     P             P+ + +IF G L +  
Sbjct: 132 ----QEERKQEKQNGRLPNGNIDNENNNSTPD------------PTWVHEIFQGTLTNET 175

Query: 383 KAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAK 441
           +    +  ++ +  + + L +  +   +I   LR FS  E L   Y+           A 
Sbjct: 176 RCLTCETISSTKMKIFIDLSVDVQQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 235

Query: 442 KSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
           K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 236 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 278


>gi|224089481|ref|XP_002308728.1| predicted protein [Populus trichocarpa]
 gi|222854704|gb|EEE92251.1| predicted protein [Populus trichocarpa]
          Length = 489

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 119/287 (41%), Gaps = 58/287 (20%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDFDTP 259
           P GL+N GN CF N  LQ L    P V  LL++    +     +  L  F   V      
Sbjct: 180 PCGLLNCGNSCFANVVLQCLTYTRPLVAYLLKKGHQTECKHNDWCFLCEFQSHV------ 233

Query: 260 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
                ++ + S L    PFSP    + L N   ++     G  RQEDA EF+   +D M 
Sbjct: 234 -----ERASQSTL----PFSPINIISRLPNIGGNL-----GYGRQEDAHEFMRLAIDTMQ 279

Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
                               V L E    + V P ++           + +  IFGG+L+
Sbjct: 280 S-------------------VCLDEFGGEKAVEPASQET---------TIIQHIFGGRLQ 311

Query: 380 S-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNA 435
           S V+  + NK S   +  + L ++I+ +A  ++E+ L  F+  E L G   Y+     + 
Sbjct: 312 SQVICTKCNKISNQFENMMDLTVEIHGDAA-SLEECLDQFTDKEWLHGENMYKCDRCND- 369

Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 482
             V A K + IQ    +L + L RF  G  G  KL+K V FP  L L
Sbjct: 370 -YVKAWKRLTIQRAPNVLTIALKRFQSGRFG--KLNKRVTFPEMLDL 413


>gi|348571693|ref|XP_003471630.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Cavia
           porcellus]
          Length = 409

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 140/328 (42%), Gaps = 61/328 (18%)

Query: 163 NIDGRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMS 222
           NI+    NA+A    I G ++ P   INE           GL+N GN C+ N+ LQAL  
Sbjct: 51  NINSVGTNASALEKDI-GPEQFP---INEHY--------FGLVNFGNTCYCNSVLQALYF 98

Query: 223 CSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSM 282
           C PF + +   + +   K    T  A        D     +++KK + V+       P  
Sbjct: 99  CRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSIATQKKKVGVI------PPKK 144

Query: 283 FEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSING--ANTALV 340
           F + L+       N +     Q+DA EFL+++++ + D +L+ + +    NG   N  + 
Sbjct: 145 FISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-ILQEEKKQEKQNGKLKNGNMN 198

Query: 341 SLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLL 399
             AE          NK  +T         + +IF G L +  +       S+  + FL L
Sbjct: 199 EPAE---------NNKPELT--------WVHEIFQGTLTNETRCLNCETVSSKDEDFLDL 241

Query: 400 HLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGVVTAKKSVKIQTLSKILILH 456
            +D+  E   +I   LR FS  E L   + Y      +     A+K ++++ L  IL LH
Sbjct: 242 SVDV--EQNTSITHCLRDFSNTETLCSEQKYYCEMCCSKQ--EAQKRMRVKKLPMILALH 297

Query: 457 LMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
           L RF Y  Q    TKL   V FPL+L L
Sbjct: 298 LKRFKYMEQLHRYTKLSYRVVFPLELRL 325


>gi|412989987|emb|CCO20629.1| predicted protein [Bathycoccus prasinos]
          Length = 706

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 122/286 (42%), Gaps = 37/286 (12%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL N GN CFLNA LQ L                +     +  L++  GF S F+   G 
Sbjct: 85  GLQNLGNTCFLNAVLQCLTYTPALANFFL-----NNEHQKHKNLSS--GFNSLFEM--GN 135

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE- 321
             K   I   +      P+ F   ++  +         + RQED+ EF   ++D MH   
Sbjct: 136 LVKNTLIHSKNKHHAVPPTAFVKNIRALSKTFK-----KGRQEDSHEFARCLLDSMHKRC 190

Query: 322 -LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
            +L    + +S N  N   ++         + P++K A T       + +  +FGGQL+S
Sbjct: 191 CMLGRVDDGSSSNTRNGKKLTA------NAIDPESKEAET-------TFIWRVFGGQLRS 237

Query: 381 VVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            V  Q   + SA + P + + L+     V ++E AL+LF+  E L+G   YR    G   
Sbjct: 238 CVTCQSCGRESAKLDPCMDMSLEC--AKVKSLEQALKLFTRVEVLDGDNKYRCE--GCKK 293

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 482
           +  AKK   +     +L + L RF +   G  KL + + +PL L L
Sbjct: 294 LSRAKKQFSVDKAPNVLQIQLKRFEFVPFGRGKLSQFIEYPLVLDL 339


>gi|354501689|ref|XP_003512921.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like
           [Cricetulus griseus]
          Length = 459

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 126/288 (43%), Gaps = 49/288 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  A        D     
Sbjct: 129 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 180

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D +
Sbjct: 181 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 228

Query: 323 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
           L+ + +    NG   N  +   AE          NK  +T         + +IF G L +
Sbjct: 229 LQEEKKQEKQNGKLKNGNMNEPAES---------NKPELT--------WVHEIFQGTLTN 271

Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 436
             +       S+  + FL L +D+  E   +I   LR FS  E L   + Y   +  +  
Sbjct: 272 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 329

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
              A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 330 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 375


>gi|224081136|ref|XP_002306306.1| predicted protein [Populus trichocarpa]
 gi|222855755|gb|EEE93302.1| predicted protein [Populus trichocarpa]
          Length = 370

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 127/300 (42%), Gaps = 37/300 (12%)

Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTL 246
           K++ D  P G     L N GN C+ N+ LQAL  C PF + L E     + I  A    L
Sbjct: 10  KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREHLLEYYGNGKSIGDAEENLL 69

Query: 247 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
           T      +        SS+KK   V+      +P  F   LK       N +      +D
Sbjct: 70  TCLADLFTQI------SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQD 112

Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
           A EFL+F+++++ D L K      S    ++    +A        GPK+  A   ++  L
Sbjct: 113 AHEFLNFLLNELVDILEKEAQAVKSDPETSSPPEKIAN-------GPKHAQANGVSKEPL 165

Query: 367 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
            + +   F G L +  +  Q    +A  + F  L LDI  E   +I   L+ FS+ E L 
Sbjct: 166 VTWVHKNFQGILTNETRCLQCETVTARDETFFDLSLDI--EQNSSITSCLKNFSSTETLN 223

Query: 426 GY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
              +        +  A+K +KI+    IL++HL RF Y  Q     KL   V FPL+L L
Sbjct: 224 AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL 283


>gi|167526008|ref|XP_001747338.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163774173|gb|EDQ87805.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1125

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 112/280 (40%), Gaps = 58/280 (20%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL+N GN CFLNA LQ L       Q LL +  TR     G   L      V    + S 
Sbjct: 203 GLVNMGNTCFLNAVLQCLTYTPALAQFLLSDDCTRMSRNKGPDALHNLATHVRRALSSSA 262

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
           G S      V         S    + K F            RQEDA EF+ F+++ +   
Sbjct: 263 GPSITPQAIV---------SKLRTIYKRFRLG---------RQEDAHEFMRFLIEALQ-- 302

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
                          +A+ ++ + DE        +S  T       S +  IFGG L+S 
Sbjct: 303 --------------KSAVSTVGQLDE--------RSKTT-------SVIHGIFGGYLRSQ 333

Query: 382 VKAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGV 437
           V+    K  S T  PFL L L+I      T++ ALR F +PE L     YR    G    
Sbjct: 334 VRCLSCKYESNTYDPFLDLSLEIGK--CQTLDKALRHFFSPEKLLRENQYRCD--GCRKY 389

Query: 438 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 477
           V A K      L  +L + L RFS+ S   +K+ + V++P
Sbjct: 390 VDALKQFSCHHLPNVLTVQLKRFSFISMFGSKVGQFVQYP 429


>gi|410957766|ref|XP_003985495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Felis catus]
          Length = 369

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 126/288 (43%), Gaps = 49/288 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  A        D     
Sbjct: 39  GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 90

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D +
Sbjct: 91  ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 138

Query: 323 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
           L+ + +    NG   N  +   AE          NK  +T         + +IF G L +
Sbjct: 139 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 181

Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 436
             +       S+  + FL L +D+  E   +I   LR FS  E L   + Y   +  +  
Sbjct: 182 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 239

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
              A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 240 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 285


>gi|440898709|gb|ELR50140.1| Ubiquitin carboxyl-terminal hydrolase 46, partial [Bos grunniens
           mutus]
          Length = 371

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 126/288 (43%), Gaps = 49/288 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  A        D     
Sbjct: 41  GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 92

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D +
Sbjct: 93  ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 140

Query: 323 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
           L+ + +    NG   N  +   AE          NK  +T         + +IF G L +
Sbjct: 141 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 183

Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 436
             +       S+  + FL L +D+  E   +I   LR FS  E L   + Y   +  +  
Sbjct: 184 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 241

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
              A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 242 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 287


>gi|297274160|ref|XP_001117796.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Macaca
           mulatta]
          Length = 626

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 117/284 (41%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF +  + L  +  P+     LT          T    
Sbjct: 296 GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKESLLTCLADLFHSIAT---- 349

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
             +KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D L
Sbjct: 350 --QKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADIL 396

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
                E       N  L +   ++E     P             P+ + +IF G L +  
Sbjct: 397 ----QEERKQEKQNGRLPNGNIDNENNNSTPD------------PTWVHEIFQGTLTNET 440

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 441 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 498

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 499 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 542


>gi|167521786|ref|XP_001745231.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776189|gb|EDQ89809.1| predicted protein [Monosiga brevicollis MX1]
          Length = 2395

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 137/306 (44%), Gaps = 54/306 (17%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-------IPKAGYPTLTAFVGFVSD 255
            G  N GN C+LNA LQ+L++   FV  L+E  T +        P        A    +  
Sbjct: 1983 GFRNVGNTCYLNAVLQSLLAVHCFVDDLREFATPERFAHSPTAPAQPSTVTCALQKLIKQ 2042

Query: 256  FDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
             D       +KK ++      P  PS     +K+       +  G   Q+DA EFLSF++
Sbjct: 2043 ID-----QREKKQLA------PIDPS----AIKHCLAQTATAFEGWG-QQDAHEFLSFLL 2086

Query: 316  DQMHDELLKLQGESTSING---ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSD 372
            D++   L + + E TS  G   +  +  SLAE      + P++ S +      +PS    
Sbjct: 2087 DRL---LAETEDEDTSEPGSPASAASTTSLAEAK----LAPRSPSPIN-GLGIIPSN--- 2135

Query: 373  IFGGQLKSVVKAQGNKASATV-QPFLLLHLDIYSE-----AVHTIEDALRLFSAPENLEG 426
             FGG+L       G K S++  + FL+L L++ S         T++  L    APE++E 
Sbjct: 2136 -FGGELLHQRACTGCKRSSSWSEAFLVLSLELPSSNDPSATPPTLQKLLATSLAPEDVE- 2193

Query: 427  YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST--KLHKSVRFPLQL---- 480
            Y+  S       T++ + ++  L + LILH+ RF+Y  Q  +  KLH+ +R    L    
Sbjct: 2194 YKCES---CDCTTSRLTHRLSRLPRCLILHVKRFTYDLQWHSRRKLHQPIRLERSLQTSH 2250

Query: 481  VLGRDL 486
            VL R +
Sbjct: 2251 VLARRI 2256


>gi|407918169|gb|EKG11442.1| Peptidase C19 ubiquitin carboxyl-terminal hydrolase 2 [Macrophomina
            phaseolina MS6]
          Length = 1121

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/296 (23%), Positives = 126/296 (42%), Gaps = 47/296 (15%)

Query: 200  LPR-GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 258
            LPR GL+N G  C++NAT+Q L +  P  ++ ++               +FV ++   + 
Sbjct: 738  LPRTGLVNFGVTCYMNATIQCLNATLPLTRIYKD--------------GSFVKYIQKQNW 783

Query: 259  PSGGSSKKKNISVL------DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 312
                 +  +N + L      + G P  P     +         N   G  RQ+DA+EFL 
Sbjct: 784  RGSQGTMSENYATLIQNLWVEGGGPVRPKTLRELCARI-----NQEWGLDRQQDAKEFLD 838

Query: 313  FIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL-----P 367
            F++D +H+++        ++N ++    +L +++E        K+ V R +         
Sbjct: 839  FLLDVLHEDM--------NVNWSHPPAQALTDQEEARRES-LPKAYVARIEWMRWSMRER 889

Query: 368  SALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG 426
            S +S++FGGQ  S ++    +  S T + F  + ++I       I D LR + + E L G
Sbjct: 890  SIVSELFGGQHMSRLRCTTCHFTSTTFETFYSISIEIPRSGRADIRDCLRSYCSEERLSG 949

Query: 427  ---YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG-SQGSTKLHKSVRFPL 478
               +R          T  K + I      L+ H  RFS   ++ + K+   + FPL
Sbjct: 950  DEVWRCPRCKKEREAT--KQITITRAPHYLVFHFKRFSASHTERARKVCTPIEFPL 1003


>gi|449438831|ref|XP_004137191.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Cucumis
           sativus]
 gi|449524412|ref|XP_004169217.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Cucumis
           sativus]
          Length = 369

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 130/307 (42%), Gaps = 43/307 (14%)

Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQELRT--RDIPKAGYPTL 246
           K++ D  P G     L N GN C+ N+ LQAL  C PF + L +  +  + I  A    L
Sbjct: 10  KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKSIGDAEENLL 69

Query: 247 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
           T      +        SS+KK   V+      +P  F   LK       N I      +D
Sbjct: 70  TCLADLFTQI------SSQKKKTGVI------APKRFVQRLKK-----QNEIFRSYMHQD 112

Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEED---EWETVGPKNKSAVTRTQ 363
           A EFL+F+++++ D L K             A+ S AE     E  + GPK   A    +
Sbjct: 113 AHEFLNFLLNELVDILEK----------EAHAIKSDAESSSPPEKISNGPKTGQANGAQK 162

Query: 364 SFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
             L + +   F G L +  +  +    +A  + FL L LDI  E   +I   L+ FS+ E
Sbjct: 163 EPLVTWVHKNFQGLLTNETRCLRCETVTARDETFLDLSLDI--EQNSSITSCLKNFSSTE 220

Query: 423 NLEGY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQ 479
            L    +        +  A+K +KI+    IL++HL RF Y  Q     KL   V FPL+
Sbjct: 221 TLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLLYRVVFPLE 280

Query: 480 LVLGRDL 486
           L L   +
Sbjct: 281 LKLSNTM 287


>gi|355727898|gb|AES09347.1| ubiquitin specific peptidase 12 [Mustela putorius furo]
          Length = 305

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 119/284 (41%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF +  + L  +  P+     LT         D     
Sbjct: 42  GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKENLLTCLA------DLFHSI 93

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D L
Sbjct: 94  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADIL 142

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
                E       N  L +   ++E     P             P+ + +IF G L +  
Sbjct: 143 ----QEERKQEKQNGRLPNGNIDNENNNSTPD------------PTWVHEIFQGTLTNET 186

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 187 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 244

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 245 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 288


>gi|119628798|gb|EAX08393.1| ubiquitin specific peptidase 12, isoform CRA_b [Homo sapiens]
          Length = 391

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 119/284 (41%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF +  + L  +  P+     LT         D     
Sbjct: 40  GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKESLLTCLA------DLFHSI 91

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D L
Sbjct: 92  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADIL 140

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
                E       N  L +   ++E     P             P+ + +IF G L +  
Sbjct: 141 ----QEERKQEKQNGRLPNGNIDNENNNSTPD------------PTWVHEIFQGTLTNET 184

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 185 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 243 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 286


>gi|431893848|gb|ELK03665.1| Ubiquitin carboxyl-terminal hydrolase 46 [Pteropus alecto]
          Length = 409

 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 126/288 (43%), Gaps = 49/288 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  A        D     
Sbjct: 91  GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 142

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D +
Sbjct: 143 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 190

Query: 323 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
           L+ + +    NG   N  +   AE          NK  +T         + +IF G L +
Sbjct: 191 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 233

Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 436
             +       S+  + FL L +D+  E   +I   LR FS  E L   + Y   +  +  
Sbjct: 234 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 291

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
              A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 292 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 337


>gi|380013085|ref|XP_003690600.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Apis
           florea]
          Length = 542

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 127/297 (42%), Gaps = 52/297 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFV---GFVSDFDT 258
           GL N GN CF+N  LQ+  + S F + L ++   + IP    PT    +   G   +F +
Sbjct: 188 GLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAKEFMS 247

Query: 259 PSGGSSKKKNISV-LDIG----RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 313
            +  + + + + + L++G    +  SP     V+    P          +Q+DA EFL++
Sbjct: 248 DALLAEELRKVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGY-----QQQDAHEFLTY 302

Query: 314 IMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 373
           ++D++H ELL+L             L  L      E +G + K ++          ++ +
Sbjct: 303 MLDRLHTELLQL-------------LPRLGH----EPLGLRGKQSI----------VTAV 335

Query: 374 FGGQLKSVVKAQGNKA-SATVQPFLLLHLDI---------YSEAVHTIEDALRLFSAPEN 423
           FGG L SVV     +  S T +PF  L LDI           E V ++  +L  F   E 
Sbjct: 336 FGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIPDRLQRRTKEQEEVCSLTYSLTRFFKVEE 395

Query: 424 LEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
           L         N  G   + K   I  L  +L LH+ RF + +   +K+   V FP++
Sbjct: 396 LADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMK 452


>gi|28502773|gb|AAH47168.1| Usp42 protein [Danio rerio]
          Length = 1016

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 116/290 (40%), Gaps = 72/290 (24%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CFLN+TLQ L   +P    +L    ++   + G+  +      +      SG
Sbjct: 84  GLHNLGNTCFLNSTLQCLTYTAPLANYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANSG 143

Query: 262 GSSKKKNISVLD----IGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
              K   ISVL+    IG+ F    F +                  QEDA EFL + +D 
Sbjct: 144 NVIKP--ISVLNELKRIGKHF---RFGS------------------QEDAHEFLRYTVDA 180

Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNK-SAVTRTQSFLPSALSDIFGG 376
           M    L                             P NK    T+  +F+      IFGG
Sbjct: 181 MQKSCL-----------------------------PGNKLDRQTQATTFV----HQIFGG 207

Query: 377 QLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSST 432
            L+S VK    KA S T  P+L + L+I  +   T+  A   F  PE L+G   Y+ S  
Sbjct: 208 YLRSRVKCLNCKAVSDTFDPYLDISLEI--KTAQTLSKAFEQFVKPEQLDGDNAYKCSKC 265

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 482
               +VTA K   +   S +L + L RF+  + G  K+ K VR+   L L
Sbjct: 266 --KKMVTASKRFTVHRSSNVLTISLKRFTNFNGG--KITKDVRYAEHLDL 311


>gi|66501571|ref|XP_392160.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Apis
           mellifera]
          Length = 541

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 127/297 (42%), Gaps = 52/297 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFV---GFVSDFDT 258
           GL N GN CF+N  LQ+  + S F + L ++   + IP    PT    +   G   +F +
Sbjct: 187 GLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAKEFMS 246

Query: 259 PSGGSSKKKNISV-LDIG----RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 313
            +  + + + + + L++G    +  SP     V+    P          +Q+DA EFL++
Sbjct: 247 DALLAEELRKVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGY-----QQQDAHEFLTY 301

Query: 314 IMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 373
           ++D++H ELL+L             L  L      E +G + K ++          ++ +
Sbjct: 302 MLDRLHTELLQL-------------LPRLGH----EPLGLRGKQSI----------VTAV 334

Query: 374 FGGQLKSVVKAQGNKA-SATVQPFLLLHLDI---------YSEAVHTIEDALRLFSAPEN 423
           FGG L SVV     +  S T +PF  L LDI           E V ++  +L  F   E 
Sbjct: 335 FGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIPDRLQRRTKEQEEVCSLTYSLTRFFKVEE 394

Query: 424 LEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
           L         N  G   + K   I  L  +L LH+ RF + +   +K+   V FP++
Sbjct: 395 LADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMK 451


>gi|402856872|ref|XP_003893003.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 21 [Papio anubis]
          Length = 670

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 117/274 (42%), Gaps = 44/274 (16%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 243 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 301

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 302 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 343

Query: 319 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 368
           H E+ + +G       AN  + S       L EE E       N   K  + R      S
Sbjct: 344 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 398

Query: 369 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 423
            + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E 
Sbjct: 399 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 458

Query: 424 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILH 456
           LE             T + K + +Q   +IL+LH
Sbjct: 459 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLH 492


>gi|224084576|ref|XP_002307344.1| predicted protein [Populus trichocarpa]
 gi|222856793|gb|EEE94340.1| predicted protein [Populus trichocarpa]
          Length = 325

 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 117/283 (41%), Gaps = 55/283 (19%)

Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDF 256
           ++ P GLIN GN C+ NA LQ L    P     +Q L ++         L     F  +F
Sbjct: 17  EMRPCGLINCGNSCYANAVLQCLAFTPPLTSFFVQGLHSKS-------CLNRECCFSCEF 69

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
           ++    + + K+        P SP    + L+N    + N      R+EDA EFL + +D
Sbjct: 70  ESIILKAKEGKS--------PLSPLGILSQLQNIGSQLGNG-----REEDAHEFLRYAID 116

Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
            M    LK  G    +N    A+ S AEE                      + +   FGG
Sbjct: 117 AMQSVCLKEAG----VN----AMDSFAEE---------------------TTLIGLTFGG 147

Query: 377 QLKSVVKAQGNKASATVQPFLLLHLDIYSEA-VHTIEDALRLFSAPENLEGYRTSSTGNA 435
            L S +K       +  Q   ++ L +  E  +  +EDALR F++ E L+G      G  
Sbjct: 148 YLHSKIKCMKCHYKSERQE-RMMDLTVEIEGNIGKLEDALRRFTSAEILDGDNKYQCGRC 206

Query: 436 -GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 477
                AKK + I     +L + L RF  G  G  KL+KS+RFP
Sbjct: 207 KSYEKAKKKMTILEAPNVLTIALKRFQSGKFG--KLNKSIRFP 247


>gi|340721026|ref|XP_003398928.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Bombus
           terrestris]
          Length = 541

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 127/297 (42%), Gaps = 52/297 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFV---GFVSDFDT 258
           GL N GN CF+N  LQ+  + S F + L ++   + IP    PT    +   G   +F +
Sbjct: 187 GLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAKEFMS 246

Query: 259 PSGGSSKKKNISV-LDIG----RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 313
            +  + + + + + L++G    +  SP     V+    P          +Q+DA EFL++
Sbjct: 247 DALLAEELRKVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGY-----QQQDAHEFLTY 301

Query: 314 IMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 373
           ++D++H ELL+L             L  L      E +G + K ++          ++ +
Sbjct: 302 MLDRLHTELLQL-------------LPRLGH----EPLGLRGKQSI----------VTAV 334

Query: 374 FGGQLKSVVKAQGNKA-SATVQPFLLLHLDI---------YSEAVHTIEDALRLFSAPEN 423
           FGG L SVV     +  S T +PF  L LDI           E V ++  +L  F   E 
Sbjct: 335 FGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIPDRLQRRTKEQEEVCSLTYSLTRFFKVEE 394

Query: 424 LEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
           L         N  G   + K   I  L  +L LH+ RF + +   +K+   V FP++
Sbjct: 395 LADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMK 451


>gi|302854895|ref|XP_002958951.1| hypothetical protein VOLCADRAFT_70119 [Volvox carteri f.
           nagariensis]
 gi|300255697|gb|EFJ39986.1| hypothetical protein VOLCADRAFT_70119 [Volvox carteri f.
           nagariensis]
          Length = 252

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 87/184 (47%), Gaps = 39/184 (21%)

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
           RQED+ EFL  ++D MH+  LK                       ++   P   +A T  
Sbjct: 33  RQEDSHEFLRCLLDAMHEACLK----------------------RFKPKPPPELAATT-- 68

Query: 363 QSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
                  +  IFGG+L+S ++ +G +  S T  PFL L L+I      ++E AL  F+AP
Sbjct: 69  ------FVYRIFGGRLRSQIECEGVDYVSRTYDPFLDLSLEI--NRAQSLERALSAFTAP 120

Query: 422 ENLEG---YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
           E L+G   YR     N  +V A K + ++    +L +H  RF YG  G+ K++K V F  
Sbjct: 121 EVLDGPNKYRCPK--NNKLVRAVKRISVEEAPNVLTVHFKRFEYGGFGA-KINKKVDFGT 177

Query: 479 QLVL 482
           QL L
Sbjct: 178 QLDL 181


>gi|297802104|ref|XP_002868936.1| ubiquitin-specific protease 3 [Arabidopsis lyrata subsp. lyrata]
 gi|297314772|gb|EFH45195.1| ubiquitin-specific protease 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 371

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 138/312 (44%), Gaps = 36/312 (11%)

Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQELRT--RDIPKAGYPTL 246
           K++ D  P G       N GN C+ N+ LQAL  C PF + L E  T  + +  A    +
Sbjct: 10  KALGDQFPEGERYFGFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKSVADAEENLM 69

Query: 247 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
           T         D  S  SS+KK   V+      +P  F   LK       N +      +D
Sbjct: 70  TCLA------DLFSQISSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQD 112

Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
           A EFL+++++++ D +L+ + ++T      T+  S  E+       P+    V +    +
Sbjct: 113 AHEFLNYLLNEVVD-ILEKEAKATKTEH-ETSSSSSPEKIANGLKVPQANGVVHKEP--I 168

Query: 367 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
            + + +IF G L +  +  +    +A  + FL L LDI  E   +I   L+ FS+ E L 
Sbjct: 169 VTWVHNIFQGILTNETRCLRCETVTARDETFLDLSLDI--EQNSSITSCLKNFSSTETLH 226

Query: 426 GY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
              +        +  A+K +KI+    IL++HL RF Y  Q     KL   V FPL+L L
Sbjct: 227 AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL 286

Query: 483 GRDLLVTPSAEV 494
                V P A+V
Sbjct: 287 SNT--VEPYADV 296


>gi|410915022|ref|XP_003970986.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Takifugu
           rubripes]
          Length = 395

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 145/332 (43%), Gaps = 43/332 (12%)

Query: 176 SSISGSKEVPMKAINEPVKSVKDLLPRGLI---NSGNLCFLNATLQALMSCSPFVQ--LL 230
           +S+S SK V    +   +   K+  P GL+   N GN CF+N  LQ L S +P ++   L
Sbjct: 22  TSVSRSKLVST-VMGLIINQAKNKRPHGLVGLRNLGNTCFMNTILQCL-SNTPDLRDYCL 79

Query: 231 QELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNF 290
             +   D+        TA    + +F      +   +++ +       SPS     ++ +
Sbjct: 80  TNVHRLDLGD----NCTANTTLMEEF------AKLIQSLCLSGSNEAISPSDVWKQIQQY 129

Query: 291 TPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWET 350
            P           Q+DAQEFL F++D +H++          +N A+        +++   
Sbjct: 130 GPKFVGC-----NQQDAQEFLRFLLDGLHND----------VNRASVLPKVSGHDNDHLG 174

Query: 351 VGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATV-QPFLLLHLDI----YS 405
              K+K           S + D+F GQLKS V       ++TV  PF  L + I     S
Sbjct: 175 DDEKSKRMWNLYLEREDSKVVDLFVGQLKSSVTCTFCGFTSTVFDPFWDLSIPIPAQKSS 234

Query: 406 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVK---IQTLSKILILHLMRFSY 462
           E V T++D LRLF+  + L+G    S       + +K  K   IQ   +IL+LHL RFS 
Sbjct: 235 EEV-TLKDCLRLFTKEDVLDG--DESPMCCRCKSRRKCTKRFSIQRFPQILVLHLKRFSD 291

Query: 463 GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEV 494
            S  ++KL   V FPL+ +  R+   T    V
Sbjct: 292 SSVRTSKLSTYVNFPLKELEMREFATTGGERV 323


>gi|350404719|ref|XP_003487196.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Bombus
           impatiens]
          Length = 541

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 127/297 (42%), Gaps = 52/297 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFV---GFVSDFDT 258
           GL N GN CF+N  LQ+  + S F + L ++   + IP    PT    +   G   +F +
Sbjct: 187 GLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAKEFMS 246

Query: 259 PSGGSSKKKNISV-LDIG----RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 313
            +  + + + + + L++G    +  SP     V+    P          +Q+DA EFL++
Sbjct: 247 DALLAEELRKVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGY-----QQQDAHEFLTY 301

Query: 314 IMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 373
           ++D++H ELL+L             L  L      E +G + K ++          ++ +
Sbjct: 302 MLDRLHTELLQL-------------LPRLGH----EPLGLRGKQSI----------VTAV 334

Query: 374 FGGQLKSVVKAQGNKA-SATVQPFLLLHLDI---------YSEAVHTIEDALRLFSAPEN 423
           FGG L SVV     +  S T +PF  L LDI           E V ++  +L  F   E 
Sbjct: 335 FGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIPDRLQRRTKEQEEVCSLTYSLTRFFKVEE 394

Query: 424 LEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
           L         N  G   + K   I  L  +L LH+ RF + +   +K+   V FP++
Sbjct: 395 LADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMK 451


>gi|34785787|gb|AAH57482.1| Usp42 protein [Danio rerio]
          Length = 985

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 116/290 (40%), Gaps = 72/290 (24%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CFLN+TLQ L   +P    +L    ++   + G+  +      +      SG
Sbjct: 84  GLHNLGNTCFLNSTLQCLTYTAPLANYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANSG 143

Query: 262 GSSKKKNISVLD----IGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
              K   ISVL+    IG+ F    F +                  QEDA EFL + +D 
Sbjct: 144 NVIKP--ISVLNELKRIGKHF---RFGS------------------QEDAHEFLRYTVDA 180

Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNK-SAVTRTQSFLPSALSDIFGG 376
           M    L                             P NK    T+  +F+      IFGG
Sbjct: 181 MQKSCL-----------------------------PGNKLDRQTQATTFV----HQIFGG 207

Query: 377 QLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSST 432
            L+S VK    KA S T  P+L + L+I  +   T+  A   F  PE L+G   Y+ S  
Sbjct: 208 YLRSRVKCLNCKAVSDTFDPYLDISLEI--KTAQTLSKAFEQFVKPEQLDGDNAYKCSKC 265

Query: 433 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 482
               +VTA K   +   S +L + L RF+  + G  K+ K VR+   L L
Sbjct: 266 --KKMVTASKRFTVHRSSNVLTISLKRFTNFNGG--KITKDVRYAEHLDL 311


>gi|56541157|gb|AAH87530.1| LOC496173 protein, partial [Xenopus laevis]
          Length = 376

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 120/284 (42%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF +  + L  +  P+     LT         D     
Sbjct: 46  GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKENLLTCLS------DLFHSI 97

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 98  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 145

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG                +   N        +  P+ + +IF G L +  
Sbjct: 146 LQEERKQEKQNGR---------------IPNGNIDNENNNNTPDPTWVHEIFQGTLTNET 190

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 191 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 248

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 249 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 292


>gi|18420557|ref|NP_568074.1| ubiquitin carboxyl-terminal hydrolase 3 [Arabidopsis thaliana]
 gi|62901126|sp|O24454.1|UBP3_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
           Full=Deubiquitinating enzyme 3; Short=AtUBP3; AltName:
           Full=Ubiquitin thioesterase 3; AltName:
           Full=Ubiquitin-specific-processing protease 3
 gi|2347098|gb|AAB67966.1| ubiquitin-specific protease [Arabidopsis thaliana]
 gi|4490742|emb|CAB38904.1| ubiquitin-specific protease (AtUBP3) [Arabidopsis thaliana]
 gi|7271046|emb|CAB80654.1| ubiquitin-specific protease (AtUBP3) [Arabidopsis thaliana]
 gi|16604539|gb|AAL24275.1| AT4g39910/T5J17_80 [Arabidopsis thaliana]
 gi|18958042|gb|AAL79594.1| AT4g39910/T5J17_80 [Arabidopsis thaliana]
 gi|332661736|gb|AEE87136.1| ubiquitin carboxyl-terminal hydrolase 3 [Arabidopsis thaliana]
          Length = 371

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 138/312 (44%), Gaps = 36/312 (11%)

Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQELRT--RDIPKAGYPTL 246
           K++ D  P G       N GN C+ N+ LQAL  C PF + L E  T  + +  A    +
Sbjct: 10  KALGDQFPEGERYFGFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKSVADAEENLM 69

Query: 247 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
           T         D  S  SS+KK   V+      +P  F   LK       N +      +D
Sbjct: 70  TCLA------DLFSQISSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQD 112

Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
           A EFL+++++++ D +L+ + ++T      T+  S  E+       P+    V +    +
Sbjct: 113 AHEFLNYLLNEVVD-ILEKEAKATKTEH-ETSSSSSPEKIANGLKVPQANGVVHKEP--I 168

Query: 367 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
            + + +IF G L +  +  +    +A  + FL L LDI  E   +I   L+ FS+ E L 
Sbjct: 169 VTWVHNIFQGILTNETRCLRCETVTARDETFLDLSLDI--EQNSSITSCLKNFSSTETLH 226

Query: 426 GY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
              +        +  A+K +KI+    IL++HL RF Y  Q     KL   V FPL+L L
Sbjct: 227 AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL 286

Query: 483 GRDLLVTPSAEV 494
                V P A+V
Sbjct: 287 SNT--VEPYADV 296


>gi|363729307|ref|XP_425636.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Gallus gallus]
          Length = 354

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 119/284 (41%), Gaps = 42/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF   +  L  +  P+     LT         D     
Sbjct: 25  GLVNFGNTCYCNSVLQALYFCRPFRDKV--LAYKSQPRKKENLLTCLA------DLFHSI 76

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 77  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 124

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG     +     D      P             P+ + +IF G L +  
Sbjct: 125 LQEERKQEKQNGR----LPNGNIDNENNSPPD------------PTWVHEIFQGTLTNET 168

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 169 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 226

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 227 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 270


>gi|334331351|ref|XP_001371592.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like
           [Monodelphis domestica]
          Length = 379

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 126/286 (44%), Gaps = 45/286 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  A        D     
Sbjct: 49  GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 100

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D +
Sbjct: 101 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 148

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG       L   +  E V   NK  +T         + +IF G L +  
Sbjct: 149 LQEEKKQEKQNG------KLKNGNMNEPV-ENNKPELT--------WVHEIFQGTLTNET 193

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGVV 438
           +       S+  + FL L +D+  E   +I   LR FS  E L   + Y   +  +    
Sbjct: 194 RCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ-- 249

Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 250 EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 295


>gi|251765111|sp|Q5M981.2|UB12B_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12-B; AltName:
           Full=Deubiquitinating enzyme 12-B; AltName:
           Full=Ubiquitin thioesterase 12-B; AltName:
           Full=Ubiquitin-specific-processing protease 12-B
          Length = 370

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 120/284 (42%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF +  + L  +  P+     LT         D     
Sbjct: 40  GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKENLLTCLS------DLFHSI 91

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 92  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 139

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG                +   N        +  P+ + +IF G L +  
Sbjct: 140 LQEERKQEKQNGR---------------IPNGNIDNENNNNTPDPTWVHEIFQGTLTNET 184

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 185 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 243 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 286


>gi|10434108|dbj|BAB14133.1| unnamed protein product [Homo sapiens]
          Length = 366

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 126/288 (43%), Gaps = 49/288 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  A        D     
Sbjct: 36  GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 87

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D +
Sbjct: 88  ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 135

Query: 323 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
           L+ + +    NG   N  +   AE          NK  +T         + +IF G L +
Sbjct: 136 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 178

Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 436
             +       S+  + FL L +D+  E   +I   LR FS  E L   + Y   +  +  
Sbjct: 179 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 236

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
              A+K ++++ L  +L LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 237 --EAQKRMRVKKLPMVLALHLKRFKYMEQLRRYTKLSYRVVFPLELRL 282


>gi|449471572|ref|XP_002196987.2| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
           [Taeniopygia guttata]
          Length = 343

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 122/300 (40%), Gaps = 52/300 (17%)

Query: 188 AINEPVKSVKDLLP--RGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYP 244
           +  E ++    L P   GL N  N C++NA LQ L S +P VQ  L      D+ +    
Sbjct: 8   SFKEQLEDTSSLHPGLTGLQNLENTCYMNAVLQCLCSLTPLVQYFLSGKWNTDLHQEIGE 67

Query: 245 TLTAFVGFVSDFDTPSGGSSKKKNISVLDIGR--PFSPSMFEAVLKNFTPDVPNSISGRP 302
           + TAF   VSD                + +G+    SP  F +V     P        R 
Sbjct: 68  SATAFGCLVSD----------------MWLGKFDYVSPEAFHSVFGKRYPAF-----SRR 106

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 362
            Q DAQEFL  ++D +H+   +++ +               +E +    G   +S+    
Sbjct: 107 TQHDAQEFLICVLDDLHEAFKEVRAQ--------------LQERQSPAAGASTRSSSG-- 150

Query: 363 QSFLPSALSDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
                S ++ +F GQL   ++    K  S   + F +L L I S  V +++D L  F  P
Sbjct: 151 ----TSIITHLFEGQLSYGIRCLTCKTLSDRPESFTILSLPIPSTRVCSLQDCLECFFQP 206

Query: 422 ENLEG---YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
           + L      R    G+    T K S  I    +I+I HL RF++  +   KL  +V +P 
Sbjct: 207 DTLTWNNQIRCHRCGSNQDATVKAS--ITKAPQIIIFHLKRFAWQDKHRRKLSTTVCYPF 264


>gi|449275065|gb|EMC84050.1| Ubiquitin carboxyl-terminal hydrolase 36, partial [Columba livia]
          Length = 349

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 104/278 (37%), Gaps = 57/278 (20%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL+N GN CFLNATLQ L    P    LL +  +R   ++G+  +      V+     SG
Sbjct: 50  GLLNLGNTCFLNATLQCLTYTPPLANYLLSKEHSRTCHQSGFCMMCVMQNHVTQAFANSG 109

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
            + K              P  F   LK   P +        RQEDA EFL F +D M   
Sbjct: 110 NAIK--------------PVSFVRNLKRIAPHIRFG-----RQEDAHEFLRFTIDAMQKA 150

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
            L+    S     A T                                +  IFGG L+S 
Sbjct: 151 CLRDHARSDRQTQATT-------------------------------LIHQIFGGYLQSR 179

Query: 382 VKAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 439
           VK    +  S T  P L + L+I   A   I  AL LF  P+ L G            V+
Sbjct: 180 VKCSVCRGVSDTFDPCLDVALEITQAA--NIVRALELFVRPDLLGGANAYMCARCKKKVS 237

Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 477
           A K   I     +L L L RF+  + G  K+ K V +P
Sbjct: 238 ATKRFTIHRAPNVLTLALKRFAGFTGG--KITKDVGYP 273


>gi|383854138|ref|XP_003702579.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Megachile
           rotundata]
          Length = 542

 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 126/297 (42%), Gaps = 52/297 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFV---GFVSDFDT 258
           GL N GN CF+N  LQ+  + S F + L ++   + IP    PT    +   G   +F  
Sbjct: 188 GLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAKEFMN 247

Query: 259 PSGGSSKKKNISV-LDIG----RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 313
            +  + + + + + L++G    +  SP     V+    P          +Q+DA EFL++
Sbjct: 248 DALLAEELRKVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGY-----QQQDAHEFLTY 302

Query: 314 IMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 373
           ++D++H ELL+L             L  L      E +G + K ++          ++ +
Sbjct: 303 MLDRLHTELLQL-------------LPRLGH----EPLGLRGKQSI----------VTAV 335

Query: 374 FGGQLKSVVKAQGNKA-SATVQPFLLLHLDI---------YSEAVHTIEDALRLFSAPEN 423
           FGG L SVV     +  S T +PF  L LDI           E V ++  +L  F   E 
Sbjct: 336 FGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIPDRLQRRTKEQEEVCSLTYSLSRFFKVEE 395

Query: 424 LEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
           L         N  G   + K   I  L  +L LH+ RF + +   +K+   V FP++
Sbjct: 396 LADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMK 452


>gi|195573010|ref|XP_002104488.1| GD20983 [Drosophila simulans]
 gi|194200415|gb|EDX13991.1| GD20983 [Drosophila simulans]
          Length = 364

 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 126/295 (42%), Gaps = 41/295 (13%)

Query: 198 DLLP-----RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFVG 251
           DL P      GL+N GN C+ N+ LQAL  C PF + + E + ++  PK    +  A + 
Sbjct: 15  DLFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKRPKETLLSCLADLF 74

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 311
           +       S  + KKK  S+       +P  F   L+    +  N +     Q+DA EFL
Sbjct: 75  Y-------SIATQKKKVGSI-------APKKFITRLRKEKEEFDNYM-----QQDAHEFL 115

Query: 312 SFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 371
           +F+++ +++ +L  +    S NG   A             G       T   +  P+ + 
Sbjct: 116 NFLINHINEIILAERNAGPS-NGNPKAT---------NQGGSTRNGTGTNGANSEPTWVH 165

Query: 372 DIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTS 430
           +IF G L S  +       S+  + F  L +D+      +I   LR FS  E L      
Sbjct: 166 EIFQGILTSETRCLNCETVSSKDENFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKF 223

Query: 431 STGN-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL 482
              N      A+K ++++ L  IL LHL RF Y  Q +   K+   V FPL+L L
Sbjct: 224 KCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPLELRL 278


>gi|255932867|ref|XP_002557904.1| Pc12g10840 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211582523|emb|CAP80711.1| Pc12g10840 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1091

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 133/303 (43%), Gaps = 40/303 (13%)

Query: 200 LPR-GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYP-TLTAFVGFVSDFD 257
           LPR GL N G  C++N+T+Q L +  P  +   + R R   +  +  +     G  ++  
Sbjct: 724 LPRTGLTNFGVTCYMNSTIQCLSATIPLSRFFIDNRFRYYVQKNWKGSQGVMPGLYANLT 783

Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
                S  K +I V+       P+ F    +NF   + N      RQ+DA+EF  F++D 
Sbjct: 784 R----SLWKNDIEVI------MPTSF----RNFCGRL-NREWAIDRQQDAKEFFDFVVDC 828

Query: 318 MHDELLKLQGESTSINGANTAL--VSLAEEDEWETVGPKNKSAVT------RTQSFLPSA 369
           +H++L        +IN   T L  ++ +EE + E +     S +       R +SF    
Sbjct: 829 LHEDL--------NINWQRTPLRPLTFSEEMQRERMPMTKVSRIEWDRYCHREESF---- 876

Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYR 428
           +S +F GQ  S ++    ++ S T + F  + ++I       I   LR +   E L G  
Sbjct: 877 ISSLFAGQHASRLRCTTCHQTSTTYEAFYSISVEIPPTGAGDIYQCLRSYCKEEMLSGDE 936

Query: 429 TSSTGNAGV-VTAKKSVKIQTLSKILILHLMRFSYG-SQGSTKLHKSVRFPLQLVLGRDL 486
                +      A K + I    +IL++H  RFS   +Q + K+H  + FPL  +   D 
Sbjct: 937 VWKCPHCKCKRMATKQIIITRAPQILVVHFKRFSASKTQSARKIHTPIEFPLHGLRMDDF 996

Query: 487 LVT 489
           +++
Sbjct: 997 VIS 999


>gi|393246455|gb|EJD53964.1| cysteine proteinase [Auricularia delicata TFB-10046 SS5]
          Length = 662

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 109/265 (41%), Gaps = 60/265 (22%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA--GYPTLTAFVGFVSDFDTPS 260
           GL N GN CFLN+ LQ L+   P +  +     RD P    G+    +F     D     
Sbjct: 109 GLYNQGNTCFLNSALQCLLHTPPLLHAVLN-HPRDCPAQDDGFCITCSFRRVAQD----- 162

Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
             S K K       G  FSPS    +L N    +  S+  R RQEDA EFL F++D M  
Sbjct: 163 --SFKVK-------GNAFSPS---PILHNLH-KIAKSLR-RGRQEDAHEFLRFLIDAMQK 208

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
               L G+   ++ A         E  W                     +S +FGG+L+S
Sbjct: 209 AC--LHGQPKKVDPA-------VAEATW---------------------VSRVFGGKLRS 238

Query: 381 VVK-AQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            V+    N  S T    L L LDI + +  ++  AL+ F A ++L G   Y+        
Sbjct: 239 RVRCCSCNHPSDTFDSILDLSLDIQNAS--SVHQALKHFVAIDHLRGADKYKCEKCKKP- 295

Query: 437 VVTAKKSVKIQTLSKILILHLMRFS 461
            V A+K   I +    L +HL RF+
Sbjct: 296 -VNAEKQFTIDSAPLALTVHLKRFT 319


>gi|148234164|ref|NP_001089397.1| ubiquitin carboxyl-terminal hydrolase 12-A [Xenopus laevis]
 gi|82177909|sp|Q52KZ6.1|UB12A_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12-A; AltName:
           Full=Deubiquitinating enzyme 12-A; AltName:
           Full=Ubiquitin thioesterase 12-A; AltName:
           Full=Ubiquitin-specific-processing protease 12-A
 gi|62825915|gb|AAH94130.1| MGC115150 protein [Xenopus laevis]
          Length = 370

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 120/284 (42%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF +  + L  +  P+     LT         D     
Sbjct: 40  GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKENLLTCLS------DLFHSI 91

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D +
Sbjct: 92  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 139

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +    NG                +   N        +  P+ + +IF G L +  
Sbjct: 140 LQEERKQEKQNGR---------------IPNGNIDNENNNSAPDPTWVHEIFQGTLTNET 184

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 185 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 243 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 286


>gi|55773913|dbj|BAD72518.1| putative ubiquitin-specific protease 23 [Oryza sativa Japonica
           Group]
          Length = 874

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 105/265 (39%), Gaps = 59/265 (22%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK-AGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C+LN+ LQ L    PF   LQ  + +   + AG+  L A    V        
Sbjct: 60  GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFCALCALQNHV-------- 111

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
                   ++   G+  +PS     L+  +    NS     RQEDA E +  +++ MH  
Sbjct: 112 ------KTALQSTGKIVTPSQIVKNLRCISRSFRNS-----RQEDAHELMVNLLESMHKC 160

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
            L     S S +    +LV                                IFGG+L+S 
Sbjct: 161 CLPSGVPSESPSAYEKSLV------------------------------HKIFGGRLRSQ 190

Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAG 436
           VK  Q +  S    PFL L LDI  +A   +  AL+ F+A E L+G    Y+        
Sbjct: 191 VKCTQCSHCSNKFDPFLDLSLDI-GKATSLVR-ALQNFTAEELLDGGEKQYQCQRCRKK- 247

Query: 437 VVTAKKSVKIQTLSKILILHLMRFS 461
            V AKK   I     +L +HL RFS
Sbjct: 248 -VVAKKKFTIDKAPYVLTIHLKRFS 271


>gi|357604445|gb|EHJ64192.1| putative ubiquitin specific protease 41 [Danaus plexippus]
          Length = 913

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 126/283 (44%), Gaps = 32/283 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVG-FVSDFDTPS 260
           GL N GN CF+N+ LQ L +  P ++ L+ +    DI      TL+   G  +  F    
Sbjct: 580 GLRNIGNTCFMNSVLQCLSNTRPLLEYLVDDKYNSDINT----TLSCMKGALIKAF---- 631

Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
             S  K+     D     + +  ++ ++ F P           Q+DAQEFL ++++ +H+
Sbjct: 632 -ASVIKELWRSGDRDCVVNTTALKSQVQRFAPRFMGY-----SQQDAQEFLRYLLEGLHE 685

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
           ++ ++  +   I         L E D+  +   K   A +R      S + DIF GQLKS
Sbjct: 686 DVNRVTVKPKPI---------LTEIDDSLSDSAKAAEAWSRYLRTEDSRVGDIFVGQLKS 736

Query: 381 VVKAQGN-KASATVQPFLLLHLDIYSEAVH-TIEDALRLFSAPENLEGYRTSSTGNAGVV 438
            ++       S T  PF  L L I S   +  ++  L+ F   E L+G    +    GV 
Sbjct: 737 TLRCTHCLHDSVTFDPFWDLSLPIPSRTGNLKLQQCLQHFVREEELDGDEKPTCSKCGV- 795

Query: 439 TAKKSVKIQTLSK---ILILHLMRFSYGSQGSTKLHKSVRFPL 478
             +K +K  T+ K   +L+LHL RFS   +   KL   V FPL
Sbjct: 796 -RRKCLKWFTVHKFPQVLVLHLKRFSPTERFRGKLSVVVEFPL 837


>gi|29367503|gb|AAO72607.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
          Length = 842

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 104/265 (39%), Gaps = 59/265 (22%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK-AGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C+LN+ LQ L    PF   LQ  + +   + AG+  L A    V        
Sbjct: 3   GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFCALCALQNHV-------- 54

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
                   ++   G+  +PS     L+  +    NS     RQEDA E +  +++ MH  
Sbjct: 55  ------KTALQSTGKIVTPSQIVKNLRCISRSFRNS-----RQEDAHELMVNLLESMHKC 103

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
            L     S S +    +LV                                IFGG+L+S 
Sbjct: 104 CLPSGVPSESPSAYEKSLV------------------------------HKIFGGRLRSQ 133

Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAG 436
           VK  Q +  S    PFL L LDI      ++  AL+ F+A E L+G    Y+        
Sbjct: 134 VKCTQCSHCSNKFDPFLDLSLDIGKAT--SLVRALQNFTAEELLDGGEKQYQCQRCRKK- 190

Query: 437 VVTAKKSVKIQTLSKILILHLMRFS 461
            V AKK   I     +L +HL RFS
Sbjct: 191 -VVAKKKFTIDKAPYVLTIHLKRFS 214


>gi|324501641|gb|ADY40728.1| Ubiquitin carboxyl-terminal hydrolase 3 [Ascaris suum]
          Length = 750

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 131/324 (40%), Gaps = 40/324 (12%)

Query: 186 MKAINEPVK--SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ------------ 231
           M  I   VK  +V++   RGL N GN CF+N+ LQAL S   F   +             
Sbjct: 322 MLCIMPAVKAITVEEKKLRGLKNLGNSCFMNSVLQALNSVQMFRYFICSLPPLEVDDVVG 381

Query: 232 ---ELRT-RDIPKAGYPTLTA----FVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMF 283
              E RT R   ++  P LTA       F+S+    +         +       F P   
Sbjct: 382 GGIETRTPRYNTRSSMPLLTADKRPAQAFISEELRKTLNEIGSGTGASGGAVNAFGP--- 438

Query: 284 EAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLA 343
           E +L  F    P    G  +Q DA EFL  ++D+MH EL   +     ++      V L 
Sbjct: 439 EGLLMEFCKVAPR-FRGF-QQHDAHEFLRCLLDRMHVELKSCRIPDWLLSEICDGGVRLG 496

Query: 344 EEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQ-PFLLLHLD 402
               + T   K +S ++  +     A+S +F G L+S V      A +    PFL L LD
Sbjct: 497 TRSHFLT--SKRRSRMSGCER--ACAISAMFEGTLQSQVTCLSCSACSNKHDPFLDLSLD 552

Query: 403 IY------SEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILIL 455
           IY            + D +R F A E L+     +  N      + K + ++TL  IL L
Sbjct: 553 IYVPSSGSRAGTVRLVDCMRRFFAKEELDSREQYTCNNCEEKRPSTKQLFVKTLPNILCL 612

Query: 456 HLMRFSY-GSQGSTKLHKSVRFPL 478
           HL RF +  S    KL   V FPL
Sbjct: 613 HLKRFRWSNSSHRGKLDNMVDFPL 636


>gi|218197715|gb|EEC80142.1| hypothetical protein OsI_21934 [Oryza sativa Indica Group]
          Length = 940

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 104/265 (39%), Gaps = 59/265 (22%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK-AGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C+LN+ LQ L    PF   LQ  + +   + AG+  L A    V        
Sbjct: 101 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFCALCALQNHV-------- 152

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
                   ++   G+  +PS     L+  +    NS     RQEDA E +  +++ MH  
Sbjct: 153 ------KTALQSTGKIVTPSQIVKNLRCISRSFRNS-----RQEDAHELMVNLLESMHKC 201

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
            L     S S +    +LV                                IFGG+L+S 
Sbjct: 202 CLPSGVPSESPSAYEKSLV------------------------------HKIFGGRLRSQ 231

Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAG 436
           VK  Q +  S    PFL L LDI      ++  AL+ F+A E L+G    Y+        
Sbjct: 232 VKCTQCSHCSNKFDPFLDLSLDIGKAT--SLVRALQNFTAEELLDGGEKQYQCQRCRKK- 288

Query: 437 VVTAKKSVKIQTLSKILILHLMRFS 461
            V AKK   I     +L +HL RFS
Sbjct: 289 -VVAKKKFTIDKAPYVLTIHLKRFS 312


>gi|170031964|ref|XP_001843853.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167871433|gb|EDS34816.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 380

 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 132/295 (44%), Gaps = 40/295 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + + E + ++  K    TL + +      D     
Sbjct: 25  GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKN--KRTKETLLSCLA-----DLFYSI 77

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK +  +      +P  F A L+    +  N +     Q+DA EFL+F+++ +++ +
Sbjct: 78  ATQKKKVGSI------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 126

Query: 323 LKLQGES----------TSING-ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 371
           L  + ++          TS NG   TA  SL         G   ++   + Q   P+ + 
Sbjct: 127 LAERNQAKGGTAAGGTTTSKNGHVGTATPSLNHLLNGCGTG---ENGTQQPQE--PTWVH 181

Query: 372 DIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTS 430
           +IF G L S  +       S+  + F  L +D+      +I   LR FS  E L      
Sbjct: 182 EIFQGILTSETRCLNCETVSSKDENFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKF 239

Query: 431 STGN-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL 482
              N      A+K ++++ L  IL LHL RF Y  Q +   K+   V FPL+L L
Sbjct: 240 KCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQYNRHIKVSHRVVFPLELRL 294


>gi|449548362|gb|EMD39329.1| hypothetical protein CERSUDRAFT_64183 [Ceriporiopsis subvermispora B]
          Length = 1166

 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 127/295 (43%), Gaps = 49/295 (16%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
            GL N GN C++N+T+Q L +  PF +   E R ++            V  V+   T   G
Sbjct: 809  GLKNLGNTCYMNSTIQCLSATVPFTRFFTEGRWKNA-----------VNMVNPLGT--KG 855

Query: 263  SSKKKNISVLD-----IGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
            +      S+L        +  +P  F   +  + P    S      Q D+QEFL+ ++D 
Sbjct: 856  ALAHAFASILREMWQGENQCLTPVTFRRSVCTYAPQFSGS-----EQHDSQEFLTSLLDG 910

Query: 318  MHDELLKL----QGESTSINGANTAL--VSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 371
            +H++L ++      E T    A      V +A E EW+    +N S V            
Sbjct: 911  LHEDLNRVLHKPHTEPTPEQEAELERLPVQIASEREWQIYRMRNDSLVV----------- 959

Query: 372  DIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSE---AVHTIEDALRLFSAPENLEGY 427
            D F GQ ++ ++    +K S T   F+ L L I S    +  +++  L  F   E +E  
Sbjct: 960  DFFQGQFRNRLECLTCHKTSTTYNAFMYLTLPIPSTRSGSKVSLQQCLDAFVKEEVME-- 1017

Query: 428  RTSSTGNAGVVTAKKSVKIQTLSK---ILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
            ++ +       T +K+ K  +LS+   +L++HL RFS     + K+   V FPL+
Sbjct: 1018 KSDAWNCPHCKTLRKATKRLSLSRLPPVLLIHLKRFSAKGPFTDKVETVVDFPLR 1072


>gi|115466786|ref|NP_001056992.1| Os06g0184300 [Oryza sativa Japonica Group]
 gi|55773912|dbj|BAD72517.1| putative ubiquitin-specific protease 23 [Oryza sativa Japonica
           Group]
 gi|113595032|dbj|BAF18906.1| Os06g0184300 [Oryza sativa Japonica Group]
          Length = 899

 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 105/265 (39%), Gaps = 59/265 (22%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK-AGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C+LN+ LQ L    PF   LQ  + +   + AG+  L A    V        
Sbjct: 60  GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFCALCALQNHV-------- 111

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
                   ++   G+  +PS     L+  +    NS     RQEDA E +  +++ MH  
Sbjct: 112 ------KTALQSTGKIVTPSQIVKNLRCISRSFRNS-----RQEDAHELMVNLLESMHKC 160

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
            L     S S +    +LV                                IFGG+L+S 
Sbjct: 161 CLPSGVPSESPSAYEKSLV------------------------------HKIFGGRLRSQ 190

Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAG 436
           VK  Q +  S    PFL L LDI  +A   +  AL+ F+A E L+G    Y+        
Sbjct: 191 VKCTQCSHCSNKFDPFLDLSLDI-GKATSLVR-ALQNFTAEELLDGGEKQYQCQRCRKK- 247

Query: 437 VVTAKKSVKIQTLSKILILHLMRFS 461
            V AKK   I     +L +HL RFS
Sbjct: 248 -VVAKKKFTIDKAPYVLTIHLKRFS 271


>gi|334332968|ref|XP_001377522.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 42 [Monodelphis domestica]
          Length = 1371

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 120/302 (39%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD-FDTPS 260
           GL N GN CF+NA LQ L    P    +L    ++   + G+  +      ++   + P 
Sbjct: 112 GLQNLGNTCFVNAALQCLTYTPPLANYMLSHEHSKICHEQGFCMMCTMQAHITQALNNP- 170

Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
            G+  K    + D+ R         + K+F             QEDA EFL + +D M  
Sbjct: 171 -GNVIKPMPVINDLRR---------IAKHFRFG---------NQEDAHEFLRYTVDAMQK 211

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
             L                               N S      S   + +  IFGG L+S
Sbjct: 212 ACL-------------------------------NGSTKLDRHSQATTLVCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCMNCKGVSDTFDPYLDIPLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKC--KK 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  S G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFSGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|358054547|dbj|GAA99473.1| hypothetical protein E5Q_06172 [Mixia osmundae IAM 14324]
          Length = 1213

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 126/291 (43%), Gaps = 43/291 (14%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
            GL N GN C++N+T+Q L +  P  +  ++   R       P  T   G ++D       
Sbjct: 790  GLKNMGNTCYMNSTIQCLSATIPLARFFKDGSYRRAINRQNPMGTQ--GVLAD------- 840

Query: 263  SSKKKNISVL--DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
             +  + I VL  +     +P  F   +  F P    +      Q D+QEFL+F++D +H+
Sbjct: 841  -AVGELIKVLWTETYNFVAPVSFRDAICRFAPQFRGT-----DQHDSQEFLAFLLDGLHE 894

Query: 321  EL---LKLQGESTSINGANTALVSL----AEEDEWETVGPKNKSAVTRTQSFLPSALSDI 373
            +L   +K             AL SL    A E EW+    +N S +            + 
Sbjct: 895  DLNFVVKKPRPVEMTPEREAALESLPTQVASEKEWQIYTRRNNSVIV-----------NW 943

Query: 374  FGGQLKSVVKA-QGNKASATVQPFLLLHLDI--YSEAVHTIEDALRLFSAPENLEGYRTS 430
            F GQ ++ ++     K S T   F+ L L +   S +  +++  L  F   E LE  ++ 
Sbjct: 944  FQGQYRNRLQCLTCGKTSTTYDTFMYLSLPLPNKSRSEVSLQQCLDAFVKEEVLE--KSE 1001

Query: 431  STGNAGVVTAKKSVKIQTLSK---ILILHLMRFSYGSQGSTKLHKSVRFPL 478
            +       T +K+ K  TLS+   IL++H  RFS+    S +L   VR+PL
Sbjct: 1002 AWNCPRCKTRRKATKRLTLSRLPPILLIHFKRFSFKGPFSERLDTVVRYPL 1052


>gi|344297764|ref|XP_003420566.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
           [Loxodonta africana]
          Length = 367

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 115/298 (38%), Gaps = 53/298 (17%)

Query: 192 PVKSVKDLLPR-----GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPT 245
           PV  V +  P      GL N GN C++NA LQ L S SP V+  L       + K+    
Sbjct: 29  PVNEVDEDQPHFQGVTGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYITALQKSCGEV 88

Query: 246 LTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 305
            TAF   ++D      G                SP +F + L N  P        +  Q+
Sbjct: 89  ATAFAYLMTDMWLGDSGC--------------VSPEIFRSALGNLYPAF-----MKKTQQ 129

Query: 306 DAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSF 365
           DAQEFL ++++ +H+ L K    S                             V  T+S 
Sbjct: 130 DAQEFLIYVLNDLHEALKKYHRRSYEKGSTRRCC-----------------RKVIATES- 171

Query: 366 LPSALSDIFGGQLK-SVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 424
             S ++ +F GQL   V+  +    S   + F +L L I SE   +++D L+ F   + L
Sbjct: 172 --SIITRLFEGQLNYDVICLKCENCSYKNEVFTVLSLPIPSEYECSLQDCLQCFFQQDTL 229

Query: 425 EGYRTSSTGNAGVVTAKKSVKIQT----LSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
                ++  +      K+   ++       KI+I HL RF        KL   + +PL
Sbjct: 230 TW---NNQIHCSFCETKQETAVRASISKAPKIIIFHLKRFDVQGTMKRKLRTHIHYPL 284


>gi|300797766|ref|NP_001178525.1| ubiquitin carboxyl-terminal hydrolase 46 [Rattus norvegicus]
 gi|319433465|gb|ADV57650.1| ubiquitin specific protease 46 [Rattus norvegicus]
          Length = 366

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 125/288 (43%), Gaps = 49/288 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  A        D     
Sbjct: 36  GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 87

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D +
Sbjct: 88  ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 135

Query: 323 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
           L+ + +    NG   N  +   AE  + E                  + + +IF G L +
Sbjct: 136 LQEEKKQEKQNGKLKNGNMNEPAENSKPEL-----------------TWVHEIFQGTLTN 178

Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 436
             +       S+  + FL L +D+  E   +I   LR FS  E L   + Y   +  +  
Sbjct: 179 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 236

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
              A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 237 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 282


>gi|356502067|ref|XP_003519843.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Glycine
           max]
          Length = 938

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 117/282 (41%), Gaps = 57/282 (20%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFD 257
           L P GL N GN C+ NA LQ L    P    L Q   ++   K G+     F   +    
Sbjct: 411 LFPFGLTNCGNSCYANAVLQCLAYTRPLTSYLFQGFHSKRCQKKGWCFTCEFEYLIQ--- 467

Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
                   K+ IS      P SP    + +      +     GR R+EDA EFL  ++D 
Sbjct: 468 ------KAKEGIS------PLSPIGILSKIHKIGSHL-----GRGREEDAHEFLRCVVDT 510

Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
           M    LK  G S+           LAEE                      + +S  FGG 
Sbjct: 511 MQSICLKEVGVSSP----------LAEE---------------------TTLVSYTFGGY 539

Query: 378 LKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE-GYRTSSTGNA 435
           L+S +K  +    S   +  + L ++I  + + T+E+AL  F+APE L+   + + +   
Sbjct: 540 LRSKIKCLRCLGKSERYERMMDLTVEIDGD-IGTLEEALGQFTAPEILDKDNKYNCSRCK 598

Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 477
             V A+K + +     IL + L RF  G+    KL+KSV+FP
Sbjct: 599 TYVKARKKLTVLEAPNILTIVLKRFQSGN--FEKLNKSVQFP 638


>gi|395514662|ref|XP_003761533.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Sarcophilus
           harrisii]
          Length = 1358

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 120/302 (39%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD-FDTPS 260
           GL N GN CF+NA LQ L    P    +L    ++   + G+  +      ++   + P 
Sbjct: 112 GLQNLGNTCFVNAALQCLTYTPPLANYMLSHEHSKICHEQGFCMMCTMQAHITQALNNP- 170

Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
            G+  K    + D+ R         + K+F             QEDA EFL + +D M  
Sbjct: 171 -GNVIKPMPVINDLRR---------IAKHFR---------FGNQEDAHEFLRYTVDAMQK 211

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
             L                               N S      S   + +  IFGG L+S
Sbjct: 212 ACL-------------------------------NGSTKLDRHSQATTLVCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCMNCKGVSDTFDPYLDIPLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKC--KK 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  S G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFSGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|351704980|gb|EHB07899.1| Ubiquitin carboxyl-terminal hydrolase 42, partial [Heterocephalus
           glaber]
          Length = 1272

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 114/283 (40%), Gaps = 61/283 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    +R     G+  +      ++   +  G
Sbjct: 95  GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSRTCHVKGFCMMCTMQAHITQALSHPG 154

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
                      D+ +P S       + N   DV         QEDA EFL +I+D M   
Sbjct: 155 -----------DVLKPMS-------IINEMEDVATHFHFG-SQEDAHEFLQYIVDGM--- 192

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
                 +   +NG+N     L    +  T+                  +  IFGG L+S 
Sbjct: 193 ------QKACLNGSN----KLDRHTQATTL------------------VCQIFGGYLRSR 224

Query: 382 VKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGV 437
           VK    K  S T +PFL + L+I  +A  ++  AL  F  PE L+G   Y+ S      +
Sbjct: 225 VKCLNCKGVSDTFEPFLDITLEI--KASPSVNKALEQFVKPEQLDGENAYKCSKCKK--M 280

Query: 438 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
           V A K   I   S +L L L RF+  + G  K+ K V++P  L
Sbjct: 281 VPASKRFTIHRSSNVLTLSLKRFANTTGG--KIAKDVKYPEYL 321


>gi|222635089|gb|EEE65221.1| hypothetical protein OsJ_20367 [Oryza sativa Japonica Group]
          Length = 940

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 104/265 (39%), Gaps = 59/265 (22%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK-AGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C+LN+ LQ L    PF   LQ  + +   + AG+  L A    V        
Sbjct: 101 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFCALCALQNHV-------- 152

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
                   ++   G+  +PS     L+  +    NS     RQEDA E +  +++ MH  
Sbjct: 153 ------KTALQSTGKIVTPSQIVKNLRCISRSFRNS-----RQEDAHELMVNLLESMHKC 201

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 381
            L     S S +    +LV                                IFGG+L+S 
Sbjct: 202 CLPSGVPSESPSAYEKSLV------------------------------HKIFGGRLRSQ 231

Query: 382 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAG 436
           VK  Q +  S    PFL L LDI      ++  AL+ F+A E L+G    Y+        
Sbjct: 232 VKCTQCSHCSNKFDPFLDLSLDIGKAT--SLVRALQNFTAEELLDGGEKQYQCQRCRKK- 288

Query: 437 VVTAKKSVKIQTLSKILILHLMRFS 461
            V AKK   I     +L +HL RFS
Sbjct: 289 -VVAKKKFTIDKAPYVLTIHLKRFS 312


>gi|242211549|ref|XP_002471612.1| predicted protein [Postia placenta Mad-698-R]
 gi|220729288|gb|EED83165.1| predicted protein [Postia placenta Mad-698-R]
          Length = 1026

 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 123/293 (41%), Gaps = 46/293 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLT------AFVGFVSDF 256
           GL N GN C++N+T+Q L +  PF +   + R +       P  T      AF   + D 
Sbjct: 670 GLKNLGNTCYMNSTIQCLSATVPFSRFFTDGRWKSAVNMMNPMGTKGNLANAFANILRDM 729

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
                    +  +  L      SP  F   L  + P       G   Q D+QEFL+F++D
Sbjct: 730 --------WQGEMQCL------SPVTFRRSLCMYAPQF-----GGTEQHDSQEFLNFLLD 770

Query: 317 QMHDELLKL----QGESTSINGANTALV--SLAEEDEWETVGPKNKSAVTRTQSFLPSAL 370
            +H++L ++    Q E+T    A    +   +A E EW+    +N S V           
Sbjct: 771 GLHEDLNRVLQKPQIETTPEREAELERLPTQIAREQEWQIWRMRNDSLVV---------- 820

Query: 371 SDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIY--SEAVHTIEDALRLFSAPENLEGY 427
            D F GQ ++ ++    +K S T   F+ L L I     +  ++   L  F   E +E  
Sbjct: 821 -DFFQGQFRNRLECLTCHKTSTTYNTFMYLTLPIPIGRGSKVSLYQCLDAFVKEEVMEKS 879

Query: 428 RTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              +  +   +  A K++ +  L  +L++HL RFS     + K+   V +P++
Sbjct: 880 DAWNCPHCKALRKATKNLSLSRLPPVLLIHLKRFSSKGHFTDKIETFVDYPIR 932


>gi|345779600|ref|XP_849650.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 46 isoform 2 [Canis lupus familiaris]
          Length = 389

 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 124/288 (43%), Gaps = 49/288 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +   + +   K    T  A        D     
Sbjct: 59  GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 110

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F + L+       N +     Q+DA EFL+++++ + D +
Sbjct: 111 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 158

Query: 323 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
           L+ + +    NG   N  +   AE          NK  +T         + +IF G L +
Sbjct: 159 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 201

Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 436
             +       S+  + FL L +D+      T    LR FS  E L   + Y   +  +  
Sbjct: 202 ETRCLNCETVSSKDEDFLALSVDVEQNTSXT--HCLRDFSNTETLCSEQKYYCETCCSKQ 259

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
              A+K ++++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 260 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRL 305


>gi|410896095|ref|XP_003961535.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Takifugu
           rubripes]
          Length = 1162

 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 122/309 (39%), Gaps = 65/309 (21%)

Query: 183 EVPMKAINEPVK-----SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTR 236
           E+P K +  P +     +    +  GL N GN CFLN+ LQ L   +PF   +L    ++
Sbjct: 59  EIPQKVLFPPERIYLKWTQVHRIGAGLQNMGNTCFLNSALQCLTYTAPFSNYMLTREHSK 118

Query: 237 DIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPN 296
              + G+  +      +      SG   K   I VL+          + + K+F      
Sbjct: 119 TCHEPGFCMMCTMQNHIIQVFANSGNVIKP--IGVLN--------ELKRIAKHFRYGS-- 166

Query: 297 SISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNK 356
                  QEDA EFL + +D M    L                             P  K
Sbjct: 167 -------QEDAHEFLRYTVDAMQKSCL-----------------------------PGTK 190

Query: 357 -SAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDA 414
               T+  +F+      +FGG L+S VK    KA S T  PFL + L+I  +   ++  A
Sbjct: 191 LDRQTQATTFI----HQVFGGYLRSRVKCLNCKAVSDTFDPFLDIPLEI--KTAPSVSKA 244

Query: 415 LRLFSAPENLEGYRT-SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKS 473
           L  F  PE L+G      T    +VTA K   I   + +L L L RF+  S G  K+ K 
Sbjct: 245 LEQFVKPEQLDGENAYKCTKCKKMVTASKRFTIHRSANVLTLALKRFANFSGG--KITKD 302

Query: 474 VRFPLQLVL 482
           V++P  L L
Sbjct: 303 VKYPEYLDL 311


>gi|324503928|gb|ADY41696.1| Ubiquitin carboxyl-terminal hydrolase 8 [Ascaris suum]
          Length = 939

 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 122/281 (43%), Gaps = 35/281 (12%)

Query: 203 GLINSGNLCFLNATLQAL-----MSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFD 257
           GL N GN CF+N+TLQAL     + C    +   EL  +      +  ++A   F +  D
Sbjct: 601 GLYNLGNTCFMNSTLQALFNTHSLRCVFTRRRFAELVNQRNKMGTFGVISA--AFSALMD 658

Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
               G+                P  F   L+ F  +V  S++ R RQ DAQEF  +++D 
Sbjct: 659 AVWSGAYSA-----------IRPLQF---LETFASEVNASLADR-RQHDAQEFQIYLLDA 703

Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
           +H+++ ++     S     T +    E  ++E           +++ F  S ++DIFG Q
Sbjct: 704 LHEDMNRVH-RPVSFEQNYTGMNLFEEGADYE----------AKSKMFSSSPVNDIFGCQ 752

Query: 378 LKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRTSSTGNA 435
             S ++    +A S T +    L +++ +    TI D ++    P  L+G  +       
Sbjct: 753 TVSQLQCGTCQAQSVTFEEVTQLSVELPTRGASTIIDCIKAHFKPVVLDGSCKWHCPKCK 812

Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRF 476
            +  A +  +I  L K+L++HL RFS+   G  K    + F
Sbjct: 813 ALRVATRVTRIWKLPKVLVVHLKRFSFVVDGWEKNDALIHF 853


>gi|168040440|ref|XP_001772702.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162675927|gb|EDQ62416.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 428

 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 115/285 (40%), Gaps = 57/285 (20%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPS 260
           P GL+N GN CF N  LQ L    P    L     R++ K           F+ +  +  
Sbjct: 121 PCGLVNCGNSCFANVVLQCLTYTRPLTAYLLNDSHREVCKRNDWC------FMCELQSHV 174

Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
               + +N        PFSP    + +++    +     G  +QEDA EF+ F +D M  
Sbjct: 175 RKVRETQN--------PFSPIRILSRIRSIGSHL-----GYGKQEDAHEFMRFAIDSMQS 221

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
             L   G   +++ A                          TQ    + +  IFGG L+S
Sbjct: 222 TCLDEFGGEKAVDPA--------------------------TQE--TTLIHHIFGGHLQS 253

Query: 381 -VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNA 435
            VVK  + +  S   +  + L ++I+   V ++EDA+  F+A E L+G   Y+       
Sbjct: 254 QVVKCMECHHESNRYESMMDLAVEIHG-VVESLEDAIAQFTAAEMLDGDNKYKCDRCN-- 310

Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
             V A K + +     IL + L RF  G  G  KL+K V FP  L
Sbjct: 311 AYVRAGKRLTVHEAPNILTIALKRFQSGKFG--KLNKRVTFPKTL 353


>gi|392565337|gb|EIW58514.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
          Length = 1173

 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 134/323 (41%), Gaps = 56/323 (17%)

Query: 185  PMKAINEPVKSVKDLL--PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG 242
            PM   + PV    DL     GL N GN C++N+T+Q L +  PF +   + R +      
Sbjct: 796  PMIPSDYPVTYWPDLQIGTTGLKNLGNTCYMNSTIQCLSATVPFSRFFTDGRWKSAVNMM 855

Query: 243  YPTLT------AFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPN 296
             P  T      AF   + +      G+               SP  F   L +  P    
Sbjct: 856  NPMGTKGNLANAFANILREMWQGEHGT--------------LSPVPFRRSLCSHAPQFSG 901

Query: 297  SISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTAL------VSLAEEDEWET 350
            S      Q D+QEFLSF++D +H++L ++  +   ++              +A E EW+ 
Sbjct: 902  S-----EQHDSQEFLSFLLDGLHEDLNRILAKPQVVSTPEREAELERLPTQIASEQEWQI 956

Query: 351  VGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSE--- 406
               ++ S V            D F GQ ++ ++    +K S T   F+ L L +  +   
Sbjct: 957  YRMRDDSLVV-----------DFFQGQYRNRMECLTCHKTSTTYNTFMYLTLPVPPKSGN 1005

Query: 407  AVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSK---ILILHLMRFSYG 463
            A   ++  +  F   E ++  ++ +       T +K+ K  +LS+   +L++HL RFS  
Sbjct: 1006 AKVPLQQCIDAFVKEEVMD--KSDAWHCPHCKTLRKATKRLSLSRLPPVLLIHLKRFSAK 1063

Query: 464  SQGSTKLHKSVRFPLQLVLGRDL 486
               + K+  +V FPL+   G DL
Sbjct: 1064 GPFTDKIETTVEFPLK---GLDL 1083


>gi|194910722|ref|XP_001982216.1| GG11165 [Drosophila erecta]
 gi|190656854|gb|EDV54086.1| GG11165 [Drosophila erecta]
          Length = 364

 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 128/295 (43%), Gaps = 41/295 (13%)

Query: 198 DLLP-----RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFVG 251
           DL P      GL+N GN C+ N+ LQAL  C PF + + E + ++  PK    +  A + 
Sbjct: 15  DLFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKRPKETLLSCLADLF 74

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 311
           +       S  + KKK  S+       +P  F   L+    +  N +     Q+DA EFL
Sbjct: 75  Y-------SIATQKKKVGSI-------APKKFITRLRKEKEEFDNYM-----QQDAHEFL 115

Query: 312 SFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 371
           +F+++ +++ +L  +    S     ++    +  +   T G  ++          P+ + 
Sbjct: 116 NFLINHINEIILAERNAGPSNGNPKSSSQGGSTRNGTGTNGANSE----------PTWVH 165

Query: 372 DIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTS 430
           +IF G L S  +       S+  + F  L +D+      +I   LR FS  E L      
Sbjct: 166 EIFQGILTSETRCLNCETVSSKDENFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKF 223

Query: 431 STGN-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL 482
              N      A+K ++++ L  IL LHL RF Y  Q +   K+   V FPL+L L
Sbjct: 224 KCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPLELRL 278


>gi|395503246|ref|XP_003755981.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
           isoform 2 [Sarcophilus harrisii]
          Length = 371

 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 114/282 (40%), Gaps = 47/282 (16%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++NA LQ L S +P V+  L       + K      TAF   ++D      
Sbjct: 43  GLRNLGNTCYMNAILQCLCSITPLVEYFLSGKYITALQKDSGEAATAFAYLMTDM----- 97

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
                     L      SP +F A +    P        +  Q+DAQEFL ++++++H+ 
Sbjct: 98  ---------WLGDSDCVSPEVFRAAIGKIYPAFL-----KRTQQDAQEFLIYVLNELHEA 143

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK-S 380
           L K + + T  NG +T          +  V     S +TR           +F GQL   
Sbjct: 144 LKKYRRKKTQENGLSTKC--------YRKVASSESSIITR-----------LFEGQLNYD 184

Query: 381 VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTA 440
           +V  +    +   + F +L L I SE   ++++ L  F   + L     ++  +     +
Sbjct: 185 IVCLKCENCTYKNEVFTVLSLPIPSECECSLQECLGCFFQQDTLTW---NNQIHCAFCES 241

Query: 441 KKSVKIQT----LSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
           K+   ++       K +I HL RF    +   KL   + +PL
Sbjct: 242 KQDAAVRASIAKAPKTVIFHLKRFDCQGRVKRKLRTDIHYPL 283


>gi|195502725|ref|XP_002098352.1| GE10332 [Drosophila yakuba]
 gi|194184453|gb|EDW98064.1| GE10332 [Drosophila yakuba]
          Length = 364

 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 130/304 (42%), Gaps = 59/304 (19%)

Query: 198 DLLP-----RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFVG 251
           DL P      GL+N GN C+ N+ LQAL  C PF + + E + ++  PK    +  A + 
Sbjct: 15  DLFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKRPKETLLSCLADLF 74

Query: 252 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 311
           +       S  + KKK  S+       +P  F   L+    +  N +     Q+DA EFL
Sbjct: 75  Y-------SIATQKKKVGSI-------APKKFITRLRKEKEEFDNYM-----QQDAHEFL 115

Query: 312 SFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVG-PK--NKSAVTRT------ 362
           +F+++ +++                   + LAE +   + G PK  N+   TR       
Sbjct: 116 NFLINHINE-------------------IILAERNAGPSNGNPKASNQGGSTRNGTGSNG 156

Query: 363 QSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 421
            +  P+ + +IF G L S  +       S+  + F  L +D+      +I   LR FS  
Sbjct: 157 ANSEPTWVHEIFQGILTSETRCLNCETVSSKDENFFDLQVDVDQNT--SITHCLRCFSNT 214

Query: 422 ENLEGYRTSSTGN-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPL 478
           E L         N      A+K ++++ L  IL LHL RF Y  Q +   K+   V FPL
Sbjct: 215 ETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPL 274

Query: 479 QLVL 482
           +L L
Sbjct: 275 ELRL 278


>gi|348568306|ref|XP_003469939.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Cavia
           porcellus]
          Length = 1328

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 123/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 110 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 169

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +  + + ++F             QEDA EFL + +D M  
Sbjct: 170 -----------DVIKPMFVINEMQRIARHFRFG---------NQEDAHEFLQYTVDAM-- 207

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  +   +NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 208 -------QKACLNGSN----KLDRHTQATTL------------------VCQIFGGYLRS 238

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 239 RVKCLNCKGVSDTFDPYLDITLEI--KAAPSVNKALEQFVKPEQLDGENSYKCSKCKK-- 294

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 295 MVPASKRFTIHRSSNVLTLSLKRFANSTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 351

Query: 497 FL 498
           ++
Sbjct: 352 YV 353


>gi|357465295|ref|XP_003602929.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
 gi|355491977|gb|AES73180.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
          Length = 1116

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 116/289 (40%), Gaps = 55/289 (19%)

Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVGFVSDF 256
           +L P GLIN GN C+ NA LQ L    P    L+Q L ++      +  +  F   +   
Sbjct: 580 ELRPFGLINIGNSCYANAVLQCLAFTPPLSAYLVQGLHSKSCSNKTWCFICEFERLI--- 636

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
                           D   P SP+   + L++    +     G  ++EDA EFL   +D
Sbjct: 637 ------------FKSKDTKSPLSPTGILSQLQSIGSQL-----GNGKEEDAHEFLRHAID 679

Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
            M    L   G    IN + +     +EED                     + +   FGG
Sbjct: 680 TMQSVCLMEAG----INASGS-----SEED--------------------TTLMGQTFGG 710

Query: 377 QLKSVVKAQGNKASATVQPFLL-LHLDIYSEAVHTIEDALRLFSAPENLEGY-RTSSTGN 434
            L+S +K       +  Q  ++ L ++I  E + T+ +ALR F++ E L+G  +      
Sbjct: 711 YLRSKIKCMKCGGKSERQERMMDLTVEIEGE-ISTLAEALRRFTSTETLDGENKYHCVRC 769

Query: 435 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLG 483
                AKK + +     IL + L RF  G  G  KL+K V+FP  L L 
Sbjct: 770 KSYQKAKKKLTVSEAPNILTVALKRFQSGKFG--KLNKPVQFPEILDLA 816


>gi|156370210|ref|XP_001628364.1| predicted protein [Nematostella vectensis]
 gi|156215339|gb|EDO36301.1| predicted protein [Nematostella vectensis]
          Length = 409

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 117/284 (41%), Gaps = 53/284 (18%)

Query: 206 NSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSK 265
           N GN C++N+ LQ L + +P          RD      P  T+  G   DF   +     
Sbjct: 84  NLGNTCYMNSVLQCLFNTAPLAAYFVSGAFRDDINKENPLGTS--GMYLDFYFITS---- 137

Query: 266 KKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLK- 324
             N S      P   + FE V                 Q+D QEFL+ +MD++H+++ + 
Sbjct: 138 -INFSFYLTSSPEFFTTFEGVC----------------QQDFQEFLALMMDKLHEDVCQI 180

Query: 325 -----LQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
                L+    +I+ A  A ++      W+    +N+S +            ++F G  K
Sbjct: 181 RHKPYLKAPDDNIDPAEAANIT------WDNHRKRNESLML-----------NLFDGMFK 223

Query: 380 SVVKAQ-GNKASATVQPFLLLHLDIYSEAVH-TIEDALRLFSAPENLEG---YRTSSTGN 434
           S V+     K S T + F  L L +   + H ++ D ++LF+  E + G   +       
Sbjct: 224 STVRCLVCAKDSVTYETFSNLTLPLPGNSNHCSLRDCIKLFTRAERMSGDDMWYCPRCKQ 283

Query: 435 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
             V  A K ++I  L  ILI+HL RF Y      KL  +V FP+
Sbjct: 284 HRV--ASKQLQIWRLPPILIVHLKRFQYDGMWRQKLQTAVSFPV 325


>gi|340500901|gb|EGR27738.1| ubiquitin carboxyl-terminal hydrolase family protein, putative
           [Ichthyophthirius multifiliis]
          Length = 557

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 115/269 (42%), Gaps = 47/269 (17%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG--YPTLTAFVGFVSDFDT 258
           P GL N+ N C++N+ +Q L S     QL +    +D  K+   Y     F  F  D+++
Sbjct: 179 PIGLQNTSNYCYMNSCIQCLFSIE---QLNKYFYQKDYMKSSSEYKYKKKF-QFCLDYNS 234

Query: 259 PSGGSSKKKNISVLDIGRP---FSPSMFEAVLKN-FTPDVPNSISGRPRQEDAQEFLSFI 314
                 K+ N   LD+ +     +P  F+   KN F P           Q DAQE+L F+
Sbjct: 235 L----LKQFNQKTLDLNQQSQYINPIEFKKNSKNKFNP---------SEQHDAQEYLLFV 281

Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
           + ++ DEL             N  L       ++ T    ++SA      + PS +  +F
Sbjct: 282 LGEIQDEL-------------NYVL-----PQKYPTEFKDSQSAYDFYIQYHPSIVDQLF 323

Query: 375 GGQLKSVVKAQGNKA---SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSS 431
            GQL S V  Q NK    S    PFL L L I  + +  I+  L  F   E ++G     
Sbjct: 324 CGQLISEV--QCNKCEHVSCAYDPFLDLSLSIDDKNLQNIDQCLENFFKAEQIDGNYKCE 381

Query: 432 TGNAGVVTAKKSVKIQTLSKILILHLMRF 460
             N  +   +K ++I    +IL+LHL RF
Sbjct: 382 KCNK-ISKPQKKIRIGKTPQILVLHLKRF 409


>gi|348541545|ref|XP_003458247.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Oreochromis
            niloticus]
          Length = 1082

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 119/292 (40%), Gaps = 37/292 (12%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLLQE-LRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
            GL N GN C++N+ LQ L +     +         DI +         +G   +     G
Sbjct: 751  GLRNLGNTCYMNSILQCLCNTPALAEYFNNNCYLEDINRHN------ILGHKGEVAEEFG 804

Query: 262  GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
               K      L  G  +  SP  F+  +        N       Q+D+QE L F+MD +H
Sbjct: 805  VIMK-----ALWAGLYKCISPRDFKITIGKI-----NEQFAGYDQQDSQELLLFLMDGLH 854

Query: 320  DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
            ++L K           N  L      D           A ++ +    S +  +F GQ K
Sbjct: 855  EDLNKADNRKRYKEEENDHLDDQTGAD----------LAWSKHKLLNESIIVALFQGQFK 904

Query: 380  SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGV 437
            S V+    ++ S T + F+ L L + S +  +++D LRLFS  E L +  +         
Sbjct: 905  STVQCLTCHRKSRTFETFMYLSLPLASTSKCSLQDCLRLFSKEEKLTDNNKVFCRHCKAH 964

Query: 438  VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL------QLVLG 483
              + K ++I  +  IL++HL RFSY  +   KL  SV FPL      Q V+G
Sbjct: 965  RDSTKKLEIWKVPPILLVHLKRFSYEGRWKQKLQTSVDFPLDNLDLAQYVIG 1016


>gi|443714551|gb|ELU06915.1| hypothetical protein CAPTEDRAFT_166013 [Capitella teleta]
          Length = 981

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 117/287 (40%), Gaps = 30/287 (10%)

Query: 203 GLINSGNLCFLNATLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++N+ +Q L +  P  V  L ++  +DI K         +           
Sbjct: 644 GLRNIGNTCYMNSIIQCLSNTIPLTVYFLSDIYVQDINKENVFGKGGVIAEEYSVVNKGL 703

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
            S + K+I+  D+          + L  F      S+      +D+QE L F+MD +H++
Sbjct: 704 WSGQYKSINPRDLW---------STLGRFY-----SLFASHEHQDSQELLLFLMDGLHED 749

Query: 322 LLKLQGESTSINGANTALV-SLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
           L K++         N  +    A    W      N+S +            ++F GQ KS
Sbjct: 750 LNKVKKRPQLPEQNNNGVSDQQAASTAWYMHKQINESIIV-----------ELFQGQFKS 798

Query: 381 VVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY-RTSSTGNAGVV 438
            V     +K S T   F+ L L I      ++ + L LFS  E++ G  R          
Sbjct: 799 TVTCMTCSKESVTFDAFVNLSLPIAQGTRVSLHECLSLFSKRESMTGESRWDCPQCKCKR 858

Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVLGR 484
            A K + +  L  ILI+HL RF Y      K+   V +PL+ L +GR
Sbjct: 859 EATKRIVVWKLPPILIIHLKRFYYRGMWRDKITTHVDYPLEGLDMGR 905


>gi|307207931|gb|EFN85490.1| Ubiquitin carboxyl-terminal hydrolase 46 [Harpegnathos saltator]
          Length = 353

 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 122/284 (42%), Gaps = 45/284 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + + E + R+  +     LT            S  
Sbjct: 25  GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARN-KRTKETLLTCLADLFY-----SIA 78

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           + KKK  S+       +P  F A L+    +  N +     Q+DA EFL+F+++ +++ +
Sbjct: 79  TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 126

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ + +S    G   A          +   P             P+ + +IF G L S  
Sbjct: 127 LE-RTQSKPAGGKCGA---------GDAGSPPE-----------PTWVHEIFQGILTSET 165

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + F  L +D+      +I   LR FS  E L    +      +    A
Sbjct: 166 RCLNCETVSSKDEDFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFKCDHCSSYQEA 223

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL 482
           +K ++++ L  IL LHL RF Y  Q +   K+   V FPL+L L
Sbjct: 224 QKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRL 267


>gi|21593319|gb|AAM65268.1| ubiquitin-specific protease 4 (UBP4) [Arabidopsis thaliana]
          Length = 365

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 128/307 (41%), Gaps = 53/307 (17%)

Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTA 248
           K++ D  P G       N GN C+ N+ LQAL  C+PF + L E    +   A    LT 
Sbjct: 10  KALGDQFPEGERYFGFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNKADAEENLLTC 69

Query: 249 FVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQ 308
                   D  S  SS+KK   V+      +P  F   LK       N +      +DA 
Sbjct: 70  LA------DLFSQISSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQDAH 112

Query: 309 EFLSFIMDQMHDELLKLQGESTSING---------ANTALVSLAEEDEWETVGPKNKSAV 359
           EFL+++++++  E+L+ + ++T  +          AN     LA        G   +  V
Sbjct: 113 EFLNYLLNEL-VEILEKETQATKADNETSSSPEKIANVLKAPLAN-------GVHKEPIV 164

Query: 360 TRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLF 418
           T            IF G L +  +  +    +A  + FL L LDI  E   +I   L+ F
Sbjct: 165 TWVHK--------IFKGILTNETRCLRCETVTARDETFLDLSLDI--EQNSSITSCLKNF 214

Query: 419 SAPENLEGY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVR 475
           S+ E L    +        +  A+K +KI+    IL++HL RF Y  Q     KL   V 
Sbjct: 215 SSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVV 274

Query: 476 FPLQLVL 482
           FPL+L L
Sbjct: 275 FPLELKL 281


>gi|18399935|ref|NP_565532.1| ubiquitin carboxyl-terminal hydrolase 4 [Arabidopsis thaliana]
 gi|62901382|sp|Q8LAM0.2|UBP4_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
           Full=Deubiquitinating enzyme 4; Short=AtUBP4; AltName:
           Full=Ubiquitin thioesterase 4; AltName:
           Full=Ubiquitin-specific-processing protease 4
 gi|2347100|gb|AAB67967.1| ubiquitin-specific protease [Arabidopsis thaliana]
 gi|4567196|gb|AAD23612.1| ubiquitin-specific protease 4 (UBP4) [Arabidopsis thaliana]
 gi|15081737|gb|AAK82523.1| At2g22310/T26C19.3 [Arabidopsis thaliana]
 gi|18252271|gb|AAL62016.1| At2g22310/T26C19.3 [Arabidopsis thaliana]
 gi|330252197|gb|AEC07291.1| ubiquitin carboxyl-terminal hydrolase 4 [Arabidopsis thaliana]
          Length = 365

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 128/307 (41%), Gaps = 53/307 (17%)

Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTA 248
           K++ D  P G       N GN C+ N+ LQAL  C+PF + L E    +   A    LT 
Sbjct: 10  KALGDQFPEGERYFGFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNKADAEENLLTC 69

Query: 249 FVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQ 308
                   D  S  SS+KK   V+      +P  F   LK       N +      +DA 
Sbjct: 70  LA------DLFSQISSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQDAH 112

Query: 309 EFLSFIMDQMHDELLKLQGESTSING---------ANTALVSLAEEDEWETVGPKNKSAV 359
           EFL+++++++  E+L+ + ++T  +          AN     LA        G   +  V
Sbjct: 113 EFLNYLLNEL-VEILEKETQATKADNETSSSPEKIANVLKAPLAN-------GVHKEPIV 164

Query: 360 TRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLF 418
           T            IF G L +  +  +    +A  + FL L LDI  E   +I   L+ F
Sbjct: 165 TWVHK--------IFQGILTNETRCLRCETVTARDETFLDLSLDI--EQNSSITSCLKNF 214

Query: 419 SAPENLEGY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVR 475
           S+ E L    +        +  A+K +KI+    IL++HL RF Y  Q     KL   V 
Sbjct: 215 SSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVV 274

Query: 476 FPLQLVL 482
           FPL+L L
Sbjct: 275 FPLELKL 281


>gi|379698942|ref|NP_001243942.1| ubiquitin carboxyl-terminal hydrolase 46 [Bombyx mori]
 gi|346230198|gb|AEO21914.1| ubiquitin carboxyl-terminal hydrolase 46 [Bombyx mori]
          Length = 392

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 123/279 (44%), Gaps = 37/279 (13%)

Query: 208 GNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKK 267
           GN C+ N+ LQAL  C PF + + E + ++  +     LT            S  + KKK
Sbjct: 17  GNTCYSNSVLQALYFCRPFREKVLEYKAKN-KRTKETLLTCLADLFY-----SIATQKKK 70

Query: 268 NISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQG 327
             S+       +P  F A L+    +  N +     Q+DA EFL+F+++ +++ +L  + 
Sbjct: 71  VGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEIILAERN 118

Query: 328 ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QG 386
           +ST         + + + +  E V   N S    T+   P+ + +IF G L S  +    
Sbjct: 119 QST---------LKVQKNNSGENVTC-NGSVPHNTE---PTWVHEIFQGTLTSETRCLNC 165

Query: 387 NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT-AKKSVK 445
              S+  + F  L +D+      +I   L+ FS  E L         N      A+K ++
Sbjct: 166 ETVSSKDEHFFDLQVDVGQNT--SITHCLKCFSDTETLCNDNKFKCDNCSSYQEAQKRMR 223

Query: 446 IQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL 482
           ++ L  IL LHL RF Y  Q +   K+   V FPL+L L
Sbjct: 224 VKKLPLILALHLKRFKYMEQFNRHIKVSHRVVFPLELRL 262


>gi|380791957|gb|AFE67854.1| ubiquitin carboxyl-terminal hydrolase 42, partial [Macaca mulatta]
          Length = 743

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 121/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL + +D M  
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFR---------FGNQEDAHEFLQYTVDAMQK 211

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
             L         NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 212 ACL---------NGSN----KLDRHTQATTL------------------VCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|302690186|ref|XP_003034772.1| hypothetical protein SCHCODRAFT_84347 [Schizophyllum commune H4-8]
 gi|300108468|gb|EFI99869.1| hypothetical protein SCHCODRAFT_84347 [Schizophyllum commune H4-8]
          Length = 408

 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 10/176 (5%)

Query: 303 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGP-KNKSAVTR 361
           +QEDA+EFL F +D++ +EL  L  +S        +     E + W  VG  K K+AV R
Sbjct: 115 QQEDAEEFLGFYLDELEEELESLLKDSQEDQQGGHS----GEAEGWTEVGKGKAKNAVVR 170

Query: 362 TQSFLP-SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
               L  S +S IFGG  +S +K      S TV+ +  L LD+  E++ TIEDA++    
Sbjct: 171 GSGPLHNSPISRIFGGTFRSTLKQPKKPDSVTVERWQRLMLDVEHESIDTIEDAIQRLVQ 230

Query: 421 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRF 476
           P+ +    + ++    ++     ++I +L  +L+LHL RF Y +    K+ K VR+
Sbjct: 231 PQTISDPASPTSQGPMML----QLQIASLPPVLVLHLKRFFYSADEVKKVSKEVRY 282


>gi|348583073|ref|XP_003477299.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Cavia
           porcellus]
          Length = 369

 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 118/284 (41%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + +  L  +  P+     LT         D     
Sbjct: 39  GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLA------DLFHSI 90

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D L
Sbjct: 91  ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADIL 139

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
                E       N  L +   ++E     P             P+ + +IF G L +  
Sbjct: 140 ----QEERKQEKQNGRLPNGNIDNENNNSTPD------------PTWVHEIFQGTLTNET 183

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   Y+           A
Sbjct: 184 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 241

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q     KL   V FPL+L L
Sbjct: 242 HKRMKVKKLPMILALHLKRFKYMDQLHRYAKLSYRVVFPLELRL 285


>gi|403365930|gb|EJY82756.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
          Length = 828

 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 129/323 (39%), Gaps = 61/323 (18%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           G+ N GN CFLN  +Q L +  P     L +L  + I K                  P G
Sbjct: 196 GIYNMGNTCFLNTAIQCLSAVQPLTDFFLGDLHEQTINKTN----------------PMG 239

Query: 262 GSSKKKNISVL------DIGRPFSPSMF-EAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 314
            S +   IS+       DI R     ++ + +LK      P         +DAQEFL+++
Sbjct: 240 TSGE---ISIYFANLLKDIWRGKEEKIYPQKLLKKLNEFAP--------HQDAQEFLAYL 288

Query: 315 MDQMHDEL--------LKLQGESTSINGANTALVSLAEEDEWETVGPKNKS-----AVTR 361
           +D +H++L        LK Q E        +  +   E ++ E     ++      A   
Sbjct: 289 LDCLHEDLNRADKFNNLKKQKEIDHKKKIQSLTLGKQETEQQENFAGYSEERQELIAYDA 348

Query: 362 TQSFL---PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDI---YSEAVHTIEDA 414
            +  L    S + D+F GQLKS +K       S     F+ L + I   Y     T+E+ 
Sbjct: 349 WKDHLFNNRSIIVDLFQGQLKSALKCLTCQHMSIKFDSFMYLSVPIPSGYKGRNPTLEEC 408

Query: 415 LRLFSAPENLEGYRTSSTGNAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKS 473
           +  F+  E L+G          +   A K + I  L  ILI+HL RF +  +   K++  
Sbjct: 409 VEEFTREEILDGDDKWKCPKCKINQRASKKIDIWKLPSILIVHLKRFEFHEKRYGKINDY 468

Query: 474 VRFPLQLVLGRDLLVTPSAEVLQ 496
           V FPL      +L +TP    LQ
Sbjct: 469 VDFPLH-----NLNLTPYVSKLQ 486


>gi|211904161|ref|NP_001127798.2| ubiquitin specific peptidase [Nasonia vitripennis]
          Length = 353

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 117/284 (41%), Gaps = 45/284 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF + + E + R+  +     LT            S  
Sbjct: 25  GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARN-KRTKETLLTCLADLFH-----SIA 78

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           + KKK  S+       +P  F A L+    +  N +     Q+DA EFL+F+++ +++ +
Sbjct: 79  TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 126

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L  + +S    G          E  W                     + +IF G L S  
Sbjct: 127 LAERNQSKPAGGKGAGDAGTPPEPTW---------------------VHEIFQGILTSET 165

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + F  L +D+      +I   L+ FS  E L    +      +    A
Sbjct: 166 RCLNCETVSSKDEDFFDLQVDVDQNT--SITHCLKCFSNTETLCSDNKFKCDHCSSYQEA 223

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL 482
           +K + ++ L  IL LHL RF Y  Q +   K+   V FPL+L L
Sbjct: 224 QKRMMLKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRL 267


>gi|431920985|gb|ELK18754.1| Ubiquitin carboxyl-terminal hydrolase 12 [Pteropus alecto]
          Length = 479

 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 119/284 (41%), Gaps = 41/284 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF +  + L  +  P+     LT         D     
Sbjct: 149 GLVNFGNTCYCNSVLQALYFCRPFRE--KVLAYKSQPRKKENLLTCLA------DLFHSI 200

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++KK + V+       P  F   L+       N +     Q+DA EFL+++++ + D L
Sbjct: 201 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADIL 249

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
                E       N  L + + + E     P             P+ + +IF G L +  
Sbjct: 250 ----QEERKQEKQNGRLPNGSIDGEGSGGAPD------------PTWVHEIFQGTLTNET 293

Query: 383 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 440
           +       S+  + FL L +D+  E   +I   LR FS  E L   ++           A
Sbjct: 294 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEHKYYCEECRSKQEA 351

Query: 441 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            K +K++ L  IL LHL RF Y  Q    TKL   V FPL+L L
Sbjct: 352 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 395


>gi|212529154|ref|XP_002144734.1| ubiquitin hydrolase, putative [Talaromyces marneffei ATCC 18224]
 gi|210074132|gb|EEA28219.1| ubiquitin hydrolase, putative [Talaromyces marneffei ATCC 18224]
          Length = 1115

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 126/291 (43%), Gaps = 36/291 (12%)

Query: 200  LPR-GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYP-TLTAFVGFVSDFD 257
            LPR GL N G  C++N+TLQ L S +   +   + R R   +  +  +     G  ++  
Sbjct: 738  LPRTGLTNFGVTCYMNSTLQCLSSTAVMSKFFIDDRFRYYVQKNWKGSQGVMPGLYANLI 797

Query: 258  TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
                 S  K ++ V+       P+ F    +NF   + N      RQ+DA+EF  F++D 
Sbjct: 798  R----SLWKNDVEVI------IPTSF----RNFCGRL-NREWAIDRQQDAKEFFDFLVDC 842

Query: 318  MHDELLKLQGESTSINGANTALVSLAEEDEWET----VGPKNKSAVTRTQSFLPSALSDI 373
            +H++L        +IN   T L  L  E+E +     V   +K    R      S +S +
Sbjct: 843  LHEDL--------NINWQRTQLRPLTFEEEMQRERMPVPKVSKIEWDRYCHREESFISSL 894

Query: 374  FGGQLKSVVKAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRT 429
            F GQ  S +K    K  S T + F  + ++I       I   LR +   E L G   ++ 
Sbjct: 895  FAGQHASRLKCTTCKRTSTTYEAFYSISVEIPHTGTGDIYQCLRSYCQEEMLSGDEVWKC 954

Query: 430  SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG-SQGSTKLHKSVRFPLQ 479
                   V T  K + I    +IL++HL RFS   +Q + K+H  V FPL 
Sbjct: 955  PYCKCERVAT--KQIIITRAPQILVIHLKRFSASKTQSARKIHTPVDFPLH 1003


>gi|302785516|ref|XP_002974529.1| hypothetical protein SELMODRAFT_414775 [Selaginella moellendorffii]
 gi|300157424|gb|EFJ24049.1| hypothetical protein SELMODRAFT_414775 [Selaginella moellendorffii]
          Length = 364

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 133/314 (42%), Gaps = 51/314 (16%)

Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFV-QLLQEL-RTRDIPKAGYPTL 246
           K++ D  P G     L N GN C+ N+ LQAL  C PF  QLL    R + + +A    L
Sbjct: 10  KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCIPFRDQLLDYYGRIKTVGEAEENLL 69

Query: 247 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
           T      +  +      S+KK   V+      +P  F   +K       + +      +D
Sbjct: 70  TCLADLFTQIN------SQKKKTGVI------APKRFVQRVKK-----QHELFRSYMHQD 112

Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSA---VTRTQ 363
           A EFL+F+++Q+ +                 AL   A+ D      P+ KS+    T  +
Sbjct: 113 AHEFLNFLLNQLVE-----------------ALEKEAKSDPTAPASPEKKSSDNGATGEE 155

Query: 364 SFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
             L + +  IF G L +  +  +    +A  + FL L LDI  E   ++   LR FS+ E
Sbjct: 156 HPL-TWVHKIFQGCLTNETRCLRCETITAKDEKFLDLSLDI--EQNSSVTSCLRNFSSTE 212

Query: 423 NL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQ 479
            L    +        +  A+K +KI+T  +IL LHL RF Y  Q     KL   V FPL+
Sbjct: 213 TLIADDKFFCDKCCSLQEAQKRMKIKTQPRILALHLKRFKYMEQLGRYKKLSYRVVFPLE 272

Query: 480 LVLGRDLLVTPSAE 493
           L L       P +E
Sbjct: 273 LKLCNTAEDAPGSE 286


>gi|302686404|ref|XP_003032882.1| hypothetical protein SCHCODRAFT_32018 [Schizophyllum commune H4-8]
 gi|300106576|gb|EFI97979.1| hypothetical protein SCHCODRAFT_32018, partial [Schizophyllum
           commune H4-8]
          Length = 300

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 124/295 (42%), Gaps = 52/295 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTL-------TAFVGFVSD 255
           GL N GN C+ NA LQ L +  PF Q  ++ R ++     + T+        AF   V  
Sbjct: 4   GLKNLGNTCYANAPLQCLSATIPFAQFFKDTRWKNAINM-HNTMGSKGVLSAAFAALVHQ 62

Query: 256 FDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
                  SS+ + I          PS F   ++        S      Q D+QEFLSF++
Sbjct: 63  M-----WSSESQLI----------PSEFMRAIRAINEQYKGS-----DQHDSQEFLSFLL 102

Query: 316 DQMHDELLK-LQGESTSINGANTALV-----SLAEEDEWETVGPKNKSAVTRTQSFLPSA 369
           D +H++L + L+ E+ +      A +      +A E EW+    +N S +          
Sbjct: 103 DGIHEDLNRILKRENYTRTPEQEAELERLPPQIASEQEWQAWRLRNDSIIV--------- 153

Query: 370 LSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDI-YSEA---VHTIEDALRLFSAPENL 424
             D F GQL++ VK     + S T   F +L L + ++ A    H ++  L  F   E L
Sbjct: 154 --DYFQGQLRNQVKCLTCGQTSTTYNTFSILSLPVPHARAGGKAH-LKQCLDAFFNSETL 210

Query: 425 EGYRTSSTGNAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
           E              +A KS+ +  L  +L++HL RF    + S K+   V FPL
Sbjct: 211 EKDDAWDCPRCKTKRSASKSLMLARLPPVLVIHLKRFEAHGRFSDKIDTFVDFPL 265


>gi|432100061|gb|ELK28954.1| Ubiquitin carboxyl-terminal hydrolase 42 [Myotis davidii]
          Length = 1175

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 122/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL + +D M  
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  +   +NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 210 -------QKACLNGSN----KLDRHTQATTL------------------VCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|74179937|dbj|BAE36525.1| unnamed protein product [Mus musculus]
          Length = 482

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 130/311 (41%), Gaps = 71/311 (22%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVS 254
           S   +   GL N GN CF+NA LQ+L S      L++E R          TL A      
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLRS------LVEEFR---------KTLCALWQ--- 193

Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 313
                  GS              FSP S+F  V K     +PN   G  +Q+DA EF+ +
Sbjct: 194 -------GSQT-----------AFSPESLFYVVWK----IMPN-FRGY-QQQDAHEFMRY 229

Query: 314 IMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 373
           ++D +H   L+LQG     NG + + + L E+    T+   NK  +    +     ++ I
Sbjct: 230 LLDHLH---LELQG---GFNGVSRSAI-LQEKS---TLSASNKCCINGAST----VVTAI 275

Query: 374 FGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRLFSA 420
           FGG L++ V        S    PFL L LDI S+             V ++ D LR F+ 
Sbjct: 276 FGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTD 335

Query: 421 PENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
            E L E              + K   IQ L K L LHL RF + +    K+   V+FPL+
Sbjct: 336 LEELDETELYMCHKCKKKQKSTKKFWIQKLPKALCLHLKRFHWTAYLRNKVDTYVQFPLR 395

Query: 480 LVLGRDLLVTP 490
            +  +  L+ P
Sbjct: 396 GLDMKCYLLEP 406


>gi|73958002|ref|XP_536882.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 isoform 1
           [Canis lupus familiaris]
          Length = 1331

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 122/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL + +D M  
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  +   +NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 210 -------QKACLNGSN----KLDRHTQATTL------------------VCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|71005508|ref|XP_757420.1| hypothetical protein UM01273.1 [Ustilago maydis 521]
 gi|46096903|gb|EAK82136.1| hypothetical protein UM01273.1 [Ustilago maydis 521]
          Length = 756

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 112/271 (41%), Gaps = 63/271 (23%)

Query: 203 GLINSGNLCFLNATLQALMSCSP--FVQLLQELRTRDIPKAGYPTLTAF--VGFVSDFDT 258
           GL N GN C++N+ +Q+L+   P  F  L Q+L        G P + AF  V  +  F  
Sbjct: 201 GLSNYGNTCYMNSVMQSLIHTPPLAFALLTQDLDALHGELGGKPNV-AFDAVAAMQTFAK 259

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRP----RQEDAQEFLSFI 314
            S   SK  N          +P  F   LK F          RP    RQEDA E+L F+
Sbjct: 260 GSLMGSKPTN----------APRDFNRNLKAF---------ARPLRQGRQEDAHEYLRFL 300

Query: 315 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
           ++ +    L            + A  SL  +D              R  SF    +  IF
Sbjct: 301 LEALQQGCL------------SRASKSLKPDDP------------IRATSF----VQKIF 332

Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTS 430
           GG+L+S V   +    S T  PF+ L LD+  + ++++ DA R F A + L G   Y+  
Sbjct: 333 GGKLRSRVTCHKCGHNSDTFDPFMDLSLDV-RKGINSLTDAFRAFVAKDQLTGSEKYKCD 391

Query: 431 STGNAGVVTAKKSVKIQTLSKILILHLMRFS 461
                  V A K   I+T    L +HL RFS
Sbjct: 392 KCKRK--VDATKQFTIETAPPALTVHLKRFS 420


>gi|194218707|ref|XP_001493909.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Equus
           caballus]
          Length = 1393

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 122/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL + +D M  
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  +   +NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|149692387|ref|XP_001501949.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
           [Equus caballus]
          Length = 373

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 112/282 (39%), Gaps = 47/282 (16%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++NA LQ L S SP V+  L       + K      TAF   ++D      
Sbjct: 45  GLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYITALQKDCSEVATAFAYVMTDM----- 99

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
                     L      SP +F + L N  P        +  Q+DAQEFL ++++++H+ 
Sbjct: 100 ---------WLGDSDCVSPEIFRSALGNLYPAF-----MKKTQQDAQEFLIYVLNELHEA 145

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK-S 380
           L K     +   G+       A  +E         S +TR           +F GQL  S
Sbjct: 146 LKKYHRRRSCEKGSVPRCCRKAIANE--------TSIITR-----------LFEGQLNYS 186

Query: 381 VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTA 440
           V        +   + F +L L I SEA  +++D L+ F   + L     ++  +      
Sbjct: 187 VTCLTCENCTYKNEVFTVLSLPIPSEAQCSLQDCLQCFFQQDTLTW---NNRIHCSFCET 243

Query: 441 KKSVKIQT----LSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
           K+   ++       K +I HL RF        KL  ++ +PL
Sbjct: 244 KQETAVRASISKAPKTVIFHLKRFDILGTMKRKLRTNIHYPL 285


>gi|393214464|gb|EJC99956.1| cysteine proteinase [Fomitiporia mediterranea MF3/22]
          Length = 1206

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 126/302 (41%), Gaps = 42/302 (13%)

Query: 199  LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 258
            L+  GL N GN C++N+T+Q L +  PF +   + R +           + V F++   T
Sbjct: 822  LMTAGLKNLGNTCYMNSTIQCLSATVPFARFFIDGRWK-----------SAVNFLNPLGT 870

Query: 259  PSGGSSKKKNISVL-DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
               G       S+L D+    SP++     +          +G   Q D+QEFL+F++D 
Sbjct: 871  --KGHLTAAFASILHDLWHQESPTITPLAFRKSVCMYGQQFAGS-EQHDSQEFLNFLLDG 927

Query: 318  MHDELLKLQGES----TSINGANTALV--SLAEEDEWETVGPKNKSAVTRTQSFLPSALS 371
            +H++L ++  +     T    A   L+   +A + EW     ++ S V            
Sbjct: 928  LHEDLNRILNKEPVLRTPEREAELELLPQQIASQQEWNLYRMRDDSIVV----------- 976

Query: 372  DIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAV-----HTIEDALRLFSAPENLE 425
            D F GQ ++ ++     K S T   F+ L L I           T++  L  F   E +E
Sbjct: 977  DFFQGQFRNRMECLTCRKTSTTYNSFMYLTLPIPMGGRGFGGKATLQQCLDAFVQEEVME 1036

Query: 426  GYRTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGR 484
                    N   +  A K + I  L  +L++HL RF+     + KL   V FPL+   G 
Sbjct: 1037 KADAWQCPNCKTLRKATKKLSISRLPPVLLIHLKRFTTKGHFTDKLETFVDFPLR---GL 1093

Query: 485  DL 486
            DL
Sbjct: 1094 DL 1095


>gi|198414888|ref|XP_002127053.1| PREDICTED: similar to ubiquitin specific protease 36 [Ciona
           intestinalis]
          Length = 768

 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 132/340 (38%), Gaps = 66/340 (19%)

Query: 157 HVLCDGNIDGRDQNAAACNSSISGSKEVPM-KAINEPVKSVKDLLPR-------GLINSG 208
           +VL  G++     N    N  +   + +P  K+I  P + + +LL R       GL+N G
Sbjct: 55  YVLLSGSLKRDKMNGVKNNGEVKTIEGIPRPKSILFPPEKL-ELLWRKSGRVGAGLVNLG 113

Query: 209 NLCFLNATLQALMSCSPFVQLLQELRTRDIPKA-GYPTLTAFVGFVSDFDTPSGGSSKKK 267
           N CFLN+ LQ L    P    L   + R   +  G   +   +         +GG S   
Sbjct: 114 NTCFLNSALQCLTYTPPLANYLMSNQHRAQCRVNGQFCMLCSLQHHQSASFGNGGKSI-- 171

Query: 268 NISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQG 327
                   RP +      +LKN      +   GR  QEDA EF+ + +D M    L    
Sbjct: 172 --------RPMN------ILKNLRIIAKHLQFGR--QEDAHEFIRYSVDAMQRSCLFGLP 215

Query: 328 ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGN 387
               I+   T LV                                IFGG L+S VK +  
Sbjct: 216 SKLDIHTKTTTLVY------------------------------QIFGGYLRSRVKCRQC 245

Query: 388 KA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGVVTAKKS 443
           +A S T  PFL L LDI  +  + +   L  F  PE L G   Y+      +  V A K+
Sbjct: 246 RAVSDTFDPFLDLSLDINKQESNDLRKCLENFVKPELLHGDNLYKCYQCKKS--VPASKT 303

Query: 444 VKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLG 483
             I     +L + L RFS  S    K+++ + +P +L LG
Sbjct: 304 FSIHRPPNVLTVQLKRFS--SFMGNKINRDITYPSKLNLG 341


>gi|426379399|ref|XP_004056385.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Gorilla gorilla
           gorilla]
          Length = 724

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 129/311 (41%), Gaps = 71/311 (22%)

Query: 195 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVS 254
           S   +   GL N GN CF+NA LQ+L S      L++E R          TL A      
Sbjct: 394 STTAICATGLRNLGNTCFMNAILQSLRS------LVEEFRK---------TLCALWQ--- 435

Query: 255 DFDTPSGGSSKKKNISVLDIGRPFSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 313
                  GS              FSP S+F  V K     +PN   G  +Q+DA EF+ +
Sbjct: 436 -------GSQTA-----------FSPESLFYVVWK----IMPN-FRGY-QQQDAHEFMRY 471

Query: 314 IMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 373
           ++D +H   L+LQG     NG + + + L E     T+   NK  +    +     ++ I
Sbjct: 472 LLDHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGAST----VVTAI 517

Query: 374 FGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRLFSA 420
           FGG L++ V        S    PFL L LDI S+             V ++ D LR F+ 
Sbjct: 518 FGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTD 577

Query: 421 PENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
            E L E              + K   IQ L K+L LHL RF + +    K+   V FPL+
Sbjct: 578 LEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLR 637

Query: 480 LVLGRDLLVTP 490
            +  +  L+ P
Sbjct: 638 GLDMKCYLLEP 648


>gi|301620627|ref|XP_002939670.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Xenopus
           (Silurana) tropicalis]
          Length = 1059

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 119/281 (42%), Gaps = 28/281 (9%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL N GN C++N+ LQ L +    ++       +      +   +  +G   +     G 
Sbjct: 719 GLRNLGNTCYMNSILQCLCNTPHLIEYFNNNFYQ-----AHINRSNLLGHKGEVAEEFGC 773

Query: 263 SSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                 +  L  G  +  SP  F+  +      +    +G   Q D+QE L F+MD +H+
Sbjct: 774 I-----MRALWTGQYKYISPKDFKITIGK----INEQFAGYTHQ-DSQELLLFLMDGLHE 823

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
           +L K           N   +S ++  +         SA  + +    S +  +F GQ KS
Sbjct: 824 DLNKKADNRKRQKEENNDHLSDSQAAD---------SAWYKHKQLNESIIVALFQGQFKS 874

Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVV 438
            V+     K S T + F+ L L + S +  +++D ++ F+  E L +  R   +      
Sbjct: 875 TVQCLTCQKKSRTFEAFMYLSLPLPSTSKCSLQDCIKAFAKEEKLTDSNRFDCSNCKTQR 934

Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
            A K ++I  L  IL++HL RFS+  +   KL   V FPL+
Sbjct: 935 VATKKIEIWKLPPILLVHLKRFSFEGRWRQKLQSYVDFPLE 975


>gi|10434352|dbj|BAB14232.1| unnamed protein product [Homo sapiens]
          Length = 1198

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 122/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL + +D M  
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  +   +NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|410984363|ref|XP_003998498.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Felis catus]
          Length = 1304

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 122/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL + +D M  
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  +   +NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 210 -------QKACLNGSN----KLDRHTQATTL------------------VCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|402862840|ref|XP_003895748.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Papio anubis]
          Length = 1316

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 122/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL + +D M  
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  +   +NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|431918189|gb|ELK17417.1| Ubiquitin carboxyl-terminal hydrolase 42 [Pteropus alecto]
          Length = 1361

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 122/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL + +D M  
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  +   +NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 210 -------QKACLNGSN----KLDRHTQATTL------------------VCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|328767948|gb|EGF77996.1| hypothetical protein BATDEDRAFT_13604 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 313

 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 124/285 (43%), Gaps = 43/285 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           G  N GN C+ N+ LQ L  C PF      +   + P++      + +  + +       
Sbjct: 5   GFENFGNTCYCNSVLQVLYFCKPFRNC---VVCYNFPESAENAQNSILHAMQELFV--AI 59

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           S++KK   V      FSP  F + LK       N +     Q+DA E  +++++ + + L
Sbjct: 60  STQKKRTGV------FSPRYFISKLKE-----ENELFNNTMQQDAHEMFNYLLNAIAEIL 108

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L  + E  + N     L +L +E                     P+ +  +F GQL +  
Sbjct: 109 LNQKTEMHA-NIQYVYLFTLVKEQT------------------APTWIHALFEGQLTNET 149

Query: 383 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT--SSTGNAGVVT 439
           K    ++ +  V+ FL L +DI   +  +I   LR FS+ E L G       T N+ +  
Sbjct: 150 KCLNCESITNRVESFLDLSIDIDQHS--SISSCLRNFSSSEVLYGKNKFFCDTCNS-LQE 206

Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
           A+K +KI+ L  +L +HL RF +  Q    +KL   V FPL+L L
Sbjct: 207 AEKRMKIKRLPNVLAVHLKRFKFQEQLGRYSKLSYQVSFPLELRL 251


>gi|255083302|ref|XP_002504637.1| predicted protein [Micromonas sp. RCC299]
 gi|226519905|gb|ACO65895.1| predicted protein [Micromonas sp. RCC299]
          Length = 368

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 138/335 (41%), Gaps = 77/335 (22%)

Query: 181 SKEVPMKAINEPVK---SVKDLLP---RGLINSGNLCFLNATLQALMSCSPFVQLLQELR 234
           +++  + A+ EPV    +V D +P   RGL N GN CFLN+ LQAL   +P  +L    R
Sbjct: 5   TRDTALAAL-EPVDLRWTVGDDVPPVGRGLRNLGNSCFLNSILQALTHTAPLAKLCLARR 63

Query: 235 TRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGR-PFSPSMFEAVLKNFTPD 293
                       TA              ++ ++  +   I R   +P   E V  N    
Sbjct: 64  H-----------TANCAL----------TNAREPCAFCIIERHAIAP---EEVFGNLRLL 99

Query: 294 VPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGP 353
             + + GR  QEDA E L   ++ M D  L   G  ++  G +    S+  + E      
Sbjct: 100 ARHFVRGR--QEDAHELLRLSLEAMDDSCLANCGRPSARRGGHRGQSSVVFDPE------ 151

Query: 354 KNKSAVTRTQSFLPSALSDIFGGQLKSVVK-AQGNKASATVQPFLLLHLDI--------- 403
                 T  +   P+A+  IF G+ +++V+ A+    S T  PFL + L++         
Sbjct: 152 ------TGARLAPPTAVERIFQGKFRNLVRCARCGHESKTYDPFLDVSLELPGREDRSSH 205

Query: 404 -----------YSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGVVTAKKSVKIQTL 449
                         A  ++E AL+ F+  E LEG   YR     +  +  A K + I   
Sbjct: 206 GGGYGPGYLRGSGSARGSVESALKNFTEEERLEGENAYRCERCKD--LCPATKRLTIHEA 263

Query: 450 SKILILHLMRFS-YGSQGSTKLHKSVRFPLQLVLG 483
             IL++HL RF  YG     K++  V F  +L LG
Sbjct: 264 PAILVVHLKRFDHYGG----KINSPVDFTERLTLG 294


>gi|383422111|gb|AFH34269.1| ubiquitin carboxyl-terminal hydrolase 42 [Macaca mulatta]
          Length = 1317

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 122/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL + +D M  
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  +   +NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|403285988|ref|XP_003934290.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Saimiri
           boliviensis boliviensis]
          Length = 1319

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 122/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL + +D M  
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  +   +NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|56693219|ref|NP_001008574.1| ubiquitin carboxyl-terminal hydrolase 2 [Danio rerio]
 gi|56269271|gb|AAH86963.1| Zgc:92134 [Danio rerio]
          Length = 391

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 119/291 (40%), Gaps = 49/291 (16%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIP---KAGYPTLTAFVGFVSDFDT 258
           GL N GN CF+N+ LQ L +        L     RD+    +     +  F   +    T
Sbjct: 59  GLRNLGNTCFMNSILQCLSNTQSLRDYCLHNSHRRDLNNNNRTHTALMEEFAKLIQTMWT 118

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
            S   +                S F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 119 SSSSEAVSP-------------SEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 160

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++   +    G       L +E+       K K   ++      S + D+F GQL
Sbjct: 161 HNEVNRV---TVRPRGNTEDFDHLPDEE-------KGKKMWSKYLEREDSKIVDLFVGQL 210

Query: 379 KS-VVKAQGNKASATVQPFLLLHLDI---YSEAVHTIEDALRLFSAPENLEG------YR 428
           KS +  ++    S    PF  L L I   Y E   ++ D +RLF+  + L+G      YR
Sbjct: 211 KSSLTCSECGYCSTVFDPFWDLSLPIAKGYGEV--SLMDCMRLFTKEDVLDGDEKPTCYR 268

Query: 429 TSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
             +          K   +Q   KIL+LHL RFS     ++KL   V FP++
Sbjct: 269 CKARRRC-----TKKFTVQKFPKILVLHLKRFSEARIRTSKLSTFVNFPMK 314


>gi|390459112|ref|XP_002744123.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Callithrix
           jacchus]
          Length = 1319

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 122/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL + +D M  
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  +   +NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 210 -------QKACLNGSN----KLDRHTQATTL------------------VCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|291290972|ref|NP_001073699.2| ubiquitin specific peptidase 50 [Bos taurus]
          Length = 378

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 120/286 (41%), Gaps = 55/286 (19%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++NA LQ L S SP V+  L       + K      TAF   ++D      
Sbjct: 50  GLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYINALQKDCSEVATAFAYVMTDM----- 104

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
                     L      SP +F + L N  P     +  +  Q+DAQEFL ++++++H+ 
Sbjct: 105 ---------WLGDSDCVSPEIFRSALGNLYP-----VFMKKTQQDAQEFLIYVLNELHEA 150

Query: 322 LLKLQ----GESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
           L K       E  SI      +++             N+S++          ++ +F GQ
Sbjct: 151 LKKYHRRKAYEKRSIPRCCRKMIA-------------NESSI----------ITRLFEGQ 187

Query: 378 L-KSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 436
           L  S+V  +    +   + F ++ L I SE   +++D L+ F   + L     ++  +  
Sbjct: 188 LSYSIVCLKCENCTYKNEVFTIISLPIPSEYECSLQDCLQCFFQQDTLTW---NNQIHCS 244

Query: 437 VVTAKKSVKIQ-TLSKI---LILHLMRFSYGSQGSTKLHKSVRFPL 478
               K+   ++ T+SK+   ++ HL RF        KL   + +PL
Sbjct: 245 FCETKQEAAVRATISKVPKTIVFHLKRFDILGTMKRKLRTDIHYPL 290


>gi|291403016|ref|XP_002717774.1| PREDICTED: Putative ubiquitin carboxyl-terminal hydrolase 50-like
           [Oryctolagus cuniculus]
          Length = 373

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 111/282 (39%), Gaps = 47/282 (16%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++NA LQ L S SP V+  L       + K      TAF   ++D      
Sbjct: 45  GLRNLGNTCYMNAILQCLGSISPLVEYFLSGKYITALQKDCSDVATAFAYLMTDM----- 99

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
                     L      SP +F + L N  P        +  Q+DAQEFL ++++++H+ 
Sbjct: 100 ---------WLGDSDCVSPEIFRSALGNLYPAF-----MKKTQQDAQEFLIYVLNELHEA 145

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS- 380
           L K     +   G+       A  +E                    S ++ +F GQL   
Sbjct: 146 LKKYHRRRSYEKGSTQRCCRKAIANE-------------------TSIITQLFEGQLNYG 186

Query: 381 VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTA 440
           ++  +    +   + F +L L I SE   +++D L+ F   + L     ++  +      
Sbjct: 187 IICLKCENCTYRNEVFTVLSLPIPSEYECSLQDCLQCFFQQDTLTW---NNQIHCSFCET 243

Query: 441 KKSVKIQT----LSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
           K+   ++       KI+I HL RF        KL   + +PL
Sbjct: 244 KQETAVRASISKAPKIIIFHLKRFDIQGTVKRKLRTDIHYPL 285


>gi|449680173|ref|XP_002165294.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12A-like [Hydra
           magnipapillata]
          Length = 396

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 137/308 (44%), Gaps = 38/308 (12%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF +  + L  + + K     LT         D  +  
Sbjct: 47  GLVNFGNTCYCNSVLQALYFCQPFRE--KVLSYKPLNKRKENLLTCLS------DLFNSI 98

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +++K+   V+      +P  F A L+       N +     Q+DA EFL+++++ + D L
Sbjct: 99  ATQKRKTGVI------APKRFVARLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-L 146

Query: 323 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
           L+ +           +L S++ +    +      S  T  +   P+ + D+F G L +  
Sbjct: 147 LQGEKLKEKEKEKLGSLSSVSSKASGSSGYSTTTSQFTLKEPPEPTWVHDLFEGTLTNET 206

Query: 383 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGVV 438
           +    +  S+  + FL + +D+  E   +I   L+ FS  E L   + Y     G+    
Sbjct: 207 RCLCCETLSSKDESFLDISVDV--EQNTSISYCLKNFSFTETLCSEQKYFCEVCGSKQ-- 262

Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--------GRDLLV 488
            A+K + ++ L +IL LHL RF Y  Q    TKL   V FPLQL L         RD L 
Sbjct: 263 EAQKRMMVKKLPQILALHLKRFKYVEQQQRFTKLSHRVTFPLQLRLFNTLENATHRDRLY 322

Query: 489 TPSAEVLQ 496
             SA V+ 
Sbjct: 323 DLSAIVVH 330


>gi|79750944|ref|NP_115548.1| ubiquitin carboxyl-terminal hydrolase 42 [Homo sapiens]
 gi|124376914|gb|AAI32863.1| Ubiquitin specific peptidase 42 [Homo sapiens]
          Length = 1316

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 122/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL + +D M  
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  +   +NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|71052117|gb|AAH60846.2| USP42 protein, partial [Homo sapiens]
          Length = 1202

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 122/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL + +D M  
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  +   +NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|114612043|ref|XP_527662.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Pan
           troglodytes]
 gi|410215148|gb|JAA04793.1| ubiquitin specific peptidase 42 [Pan troglodytes]
 gi|410304720|gb|JAA30960.1| ubiquitin specific peptidase 42 [Pan troglodytes]
          Length = 1316

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 122/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL + +D M  
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  +   +NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|109065910|ref|XP_001090104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Macaca
           mulatta]
          Length = 1317

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 122/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL + +D M  
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  +   +NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|78057011|emb|CAE53097.1| ubiquitin-specific protease 42 [Homo sapiens]
          Length = 1325

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 122/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL + +D M  
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  +   +NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 210 -------QKACLNGSN----KLDRHTQATTL------------------VCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|397526145|ref|XP_003832997.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Pan paniscus]
          Length = 1316

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 122/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL + +D M  
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  +   +NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|322967638|sp|E1B9W9.1|UBP42_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
           Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
           thioesterase 42; AltName:
           Full=Ubiquitin-specific-processing protease 42
          Length = 1333

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 122/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL + +D M  
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  +   +NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|302759609|ref|XP_002963227.1| hypothetical protein SELMODRAFT_438411 [Selaginella moellendorffii]
 gi|300168495|gb|EFJ35098.1| hypothetical protein SELMODRAFT_438411 [Selaginella moellendorffii]
          Length = 364

 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 133/314 (42%), Gaps = 51/314 (16%)

Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFV-QLLQEL-RTRDIPKAGYPTL 246
           K++ D  P G     L N GN C+ N+ LQAL  C PF  QLL    R + + +A    L
Sbjct: 10  KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCIPFRDQLLDYYGRIKTVGEAEENLL 69

Query: 247 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
           T      +  +      S+KK   V+      +P  F   +K       + +      +D
Sbjct: 70  TCLADLFTQIN------SQKKKTGVI------APKRFVQRVKK-----QHELFRSYMHQD 112

Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSA---VTRTQ 363
           A EFL+F+++Q+ + L K                  A+ D      P+ KS+    T  +
Sbjct: 113 AHEFLNFLLNQLVETLEK-----------------EAKSDPTAPASPEKKSSDNGATGEE 155

Query: 364 SFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
             L + +  IF G L +  +  +    +A  + FL L LDI  E   ++   LR FS+ E
Sbjct: 156 HPL-TWVHKIFQGCLTNETRCLRCETITAKDEKFLDLSLDI--EQNSSVTSCLRNFSSTE 212

Query: 423 NL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQ 479
            L    +        +  A+K +KI+T  +IL LHL RF Y  Q     KL   V FPL+
Sbjct: 213 TLIADDKFFCDKCCSLQEAQKRMKIKTQPRILALHLKRFKYMEQLGRYKKLSYRVVFPLE 272

Query: 480 LVLGRDLLVTPSAE 493
           L L       P +E
Sbjct: 273 LKLCNTAEDAPGSE 286


>gi|410266774|gb|JAA21353.1| ubiquitin specific peptidase 42 [Pan troglodytes]
          Length = 1316

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 122/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL + +D M  
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  +   +NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|291408075|ref|XP_002720394.1| PREDICTED: deubiquitinating enzyme 3-like [Oryctolagus cuniculus]
          Length = 503

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 124/300 (41%), Gaps = 66/300 (22%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAF-VGFVSDFDTPS 260
           GL N GN C++NATLQ L    P    +L +  ++    +G+  L A    F+    +P 
Sbjct: 57  GLQNMGNTCYMNATLQCLTYTPPLANYMLSQAHSQTCRPSGFCMLCAVETHFLWALHSPG 116

Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                       D+ +P      +A+   F          R RQEDA EFL F +D    
Sbjct: 117 ------------DVIQPC-----QALAAAFH---------RNRQEDAHEFLVFTVD---- 146

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
             LK  G    +N                 VGPK   +++            IFGG  KS
Sbjct: 147 -ALKAAGLPGLMN----------------VVGPKEDKSLSH----------QIFGGYWKS 179

Query: 381 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT 439
            +K  Q    S T+ P+L + LDI  +   +++ AL     PE L+G      G     T
Sbjct: 180 QIKCLQCQGVSDTLDPYLDIALDI--KTADSVQQALEQLVKPEELDGENAYECGICLKKT 237

Query: 440 -AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQFL 498
            A K++ +Q+   +LI  L RFS  +    K+ + V++P  L + R  +   S   L+++
Sbjct: 238 AASKTLVLQSSGNVLIFVLKRFSDFT--GEKIARQVQYPECLDM-RPYMSQQSGRPLEYV 294


>gi|332265913|ref|XP_003281959.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Nomascus
           leucogenys]
          Length = 1315

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 122/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL + +D M  
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  +   +NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|119575449|gb|EAW55047.1| ubiquitin specific peptidase 42, isoform CRA_a [Homo sapiens]
          Length = 1234

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 122/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL + +D M  
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  +   +NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|348572084|ref|XP_003471824.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
           [Cavia porcellus]
          Length = 378

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 118/300 (39%), Gaps = 48/300 (16%)

Query: 185 PMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQE-LRTRDIPKAGY 243
           P+ A  +P +        GL N GN C++NA LQ L S  P  Q  +       + K   
Sbjct: 33  PLPAREDPARPPNPPGVAGLRNLGNTCYMNAVLQCLASVPPLAQYFRSGQYVTALRKDCR 92

Query: 244 PTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPR 303
              TAF   ++D                L      SP  F A L    PD          
Sbjct: 93  EVATAFAYLLTDM--------------WLGDADCVSPEEFRAALGRLHPDFTKRT----- 133

Query: 304 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ 363
           Q+DAQEFL ++++ +H+ L K    S              E+   +    +  ++ T   
Sbjct: 134 QQDAQEFLIYVLNALHEALRKYHQRS-------------GEKRSTQRCCSRGIASET--- 177

Query: 364 SFLPSALSDIFGGQLK-SVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 422
               S ++ +F GQL  S++  +    S   + F +L L I SE   T++D L+ F   +
Sbjct: 178 ----SIITQLFEGQLNYSIMCLKCENCSYRNEVFTVLSLPIPSEYECTLQDCLQCFFQQD 233

Query: 423 NLEGYRTSSTGNAGVVTAKKSVKIQ-TLS---KILILHLMRFSYGSQGSTKLHKSVRFPL 478
            L     ++  +      K+   ++ ++S   K +I HL RF    Q   KL   + +PL
Sbjct: 234 TLTW---NNQIHCSFCETKQETAVRASISKPPKTIIFHLKRFDIQGQVKRKLRTDIHYPL 290


>gi|331284138|ref|NP_001193568.1| ubiquitin carboxyl-terminal hydrolase 42 [Bos taurus]
 gi|296473096|tpg|DAA15211.1| TPA: ubiquitin specific protease 42-like [Bos taurus]
          Length = 1325

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 122/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL + +D M  
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  +   +NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|440899908|gb|ELR51150.1| Ubiquitin carboxyl-terminal hydrolase 42, partial [Bos grunniens
           mutus]
          Length = 1304

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 122/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL + +D M  
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  +   +NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|221043762|dbj|BAH13558.1| unnamed protein product [Homo sapiens]
          Length = 328

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 116/277 (41%), Gaps = 40/277 (14%)

Query: 213 LNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISV 271
           +N+ LQ L +        LQ L  RD+         A    V +F          K I  
Sbjct: 1   MNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF---------AKLIQT 47

Query: 272 LDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGE 328
           +    P    SPS F+  ++ + P           Q+DAQEFL F++D +H+E+ ++   
Sbjct: 48  IWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGLHNEVNRVTLR 102

Query: 329 STSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNK 388
             S    N   +    +DE      K +    +      S + D+F GQLKS +      
Sbjct: 103 PKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCG 152

Query: 389 ASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSSTGNAGVVTAKK 442
             +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +     G     K
Sbjct: 153 YCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIK 210

Query: 443 SVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
              IQ   KIL+LHL RFS     ++KL   V FPL+
Sbjct: 211 KFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLR 247


>gi|322510098|sp|Q9H9J4.3|UBP42_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
           Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
           thioesterase 42; AltName:
           Full=Ubiquitin-specific-processing protease 42
          Length = 1324

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 122/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL + +D M  
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  +   +NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 210 -------QKACLNGSN----KLDRHTQATTL------------------VCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|297825441|ref|XP_002880603.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297326442|gb|EFH56862.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 650

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 117/292 (40%), Gaps = 62/292 (21%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDFD 257
           + P GL N GN CF N  LQ L    P V  LL+    R+  +  +     F  F +  D
Sbjct: 171 MAPCGLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECRRNDW---CFFCEFENHLD 227

Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
                   + N S      PFSP    + L N   ++     G  RQEDA E +   +D 
Sbjct: 228 --------RANHSRF----PFSPMNIISRLPNIGGNL-----GYGRQEDAHELMRSAIDM 270

Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEW--ETVGPKNKSAVTRTQSFLPSALSDIFG 375
           M    L                      DE+  E V P      T  Q         IFG
Sbjct: 271 MQSVCL----------------------DEFGGEKVVPPRAQETTLIQY--------IFG 300

Query: 376 GQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSS 431
           G L+S V+    +  S   +  + L ++I+ +AV ++E+ L  F+A E L+G   Y+   
Sbjct: 301 GLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAV-SLEECLDQFTAKEWLQGDNLYKCDR 359

Query: 432 TGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLG 483
             +   V A K + I+    IL + L RF  G  G  KL+K + FP    LG
Sbjct: 360 CDD--YVKACKRLSIRCAPNILTIALKRFQGGRFG--KLNKRISFPETFDLG 407


>gi|51094456|gb|EAL23715.1| ubiquitin specific protease 42 [Homo sapiens]
          Length = 1350

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 122/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL + +D M  
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  +   +NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 210 -------QKACLNGSN----KLDRHTQATTL------------------VCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|194034732|ref|XP_001927691.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
           [Sus scrofa]
          Length = 373

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 116/282 (41%), Gaps = 47/282 (16%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++NA LQ L S SP V+  L       + K      TAF   ++D      
Sbjct: 45  GLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYITALQKDCSEVATAFAYVMTDM----- 99

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
                     L      SP +F + L N  P +      +  Q+DAQEFL ++++++H+ 
Sbjct: 100 ---------WLGDSECVSPEIFRSALGNLYPAL-----MKKTQQDAQEFLIYVLNELHEA 145

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK-S 380
           L K     +  N +                 P+    +  ++S   S ++ +F GQL  S
Sbjct: 146 LKKYHRRRSYENRS----------------IPRCCRKMIASES---SIITRLFEGQLSYS 186

Query: 381 VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTA 440
           ++  +    +   + F +L L I SE   +++D L+ F   + L     ++  +      
Sbjct: 187 IICLKCENCTYKNEVFTVLPLPIPSEYECSLQDCLQCFFQQDTLTW---NNQIHCSFCET 243

Query: 441 KKSVKIQT----LSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
           K+   ++       KI++ HL RF        KL   + +PL
Sbjct: 244 KQETAVRASISKAPKIIVFHLKRFDILGTMKRKLRTDIHYPL 285


>gi|378733709|gb|EHY60168.1| ubiquitin thiolesterase [Exophiala dermatitidis NIH/UT8656]
          Length = 1111

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/302 (25%), Positives = 123/302 (40%), Gaps = 42/302 (13%)

Query: 200  LPR-GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 258
            LPR GL N G  C++N+TLQ L +  P      +                + G+V     
Sbjct: 746  LPRTGLTNFGVTCYMNSTLQCLSATIPLSAFFND--------------RVYEGYVQRNWK 791

Query: 259  PSGGSSKKKNISVL--------DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 310
             S G   K   +++        D+ +P       +  +NF   + N      RQ+DA+EF
Sbjct: 792  GSNGIMPKLYANLIQAVWQEDTDVIKP-------STFRNFCGRM-NREWAIDRQQDAKEF 843

Query: 311  LSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGP-KNKSAVTRTQSFLPSA 369
              F++D +H++ L +  E   +    TA     E  E     P + K    R  SF    
Sbjct: 844  FDFLVDCLHED-LNVNWERNPLRPLTTAEEMQRERMEIARASPIEWKRYEHRDHSF---- 898

Query: 370  LSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGY 427
            LS IF GQ  S ++     + S T + F  + ++I    V  I D L  +   E L E +
Sbjct: 899  LSSIFAGQHASRLRCLTCRRTSTTYEAFYSISIEIPRSGVGHIYDCLNSYCREEKLSELW 958

Query: 428  RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS-QGSTKLHKSVRFPLQLVLGRDL 486
            R          T  K + +  L + L++H  RF+    + + K+H  + FPL  +   D 
Sbjct: 959  RCPYCKCEREAT--KQIILTRLPQFLVIHFKRFAASKHERAQKIHTPIEFPLHGLSMDDF 1016

Query: 487  LV 488
            ++
Sbjct: 1017 VI 1018


>gi|83767337|dbj|BAE57476.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 872

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 133/314 (42%), Gaps = 36/314 (11%)

Query: 188 AINEPVKSVKDLLPR-GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYP-T 245
           A+  P    +  LPR GL N G  C++N+T+Q L +     +   + R R   +  +  +
Sbjct: 489 ALYTPSSIYRAKLPRTGLANFGVTCYMNSTIQCLNATMMLSRFFVDNRFRYYVQKNWKGS 548

Query: 246 LTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 305
                G  ++       S  K ++ V+       P+ F    +NF   + N      RQ+
Sbjct: 549 QGVMPGLFANLIR----SLWKGDVEVI------VPTSF----RNFCGRL-NQEWAIDRQQ 593

Query: 306 DAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWET----VGPKNKSAVTR 361
           DA+EF  F +D +H++L        +IN   + L  L  E+E +     V   +K    R
Sbjct: 594 DAKEFFDFTVDCLHEDL--------NINWQRSPLRPLTFEEEMQRERMPVAKVSKIEWDR 645

Query: 362 TQSFLPSALSDIFGGQLKSVVKAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
                 S +S +F GQ  S ++    K  S T + F  + ++I S     I   LR +  
Sbjct: 646 YCHREESFISSLFAGQHASRLRCTTCKRTSTTYEAFYSISVEIPSSGTGDIYQCLRSYCK 705

Query: 421 PENLEG---YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG-SQGSTKLHKSVRF 476
            E L G   ++        V T  K + I    +IL++H  RFS   +Q + K+H  + F
Sbjct: 706 EEMLSGDEVWKCPYCKCERVAT--KQIIITRAPQILVIHFKRFSASKTQTARKIHTPIEF 763

Query: 477 PLQLVLGRDLLVTP 490
           PL  +   D + +P
Sbjct: 764 PLHGLRMDDFVYSP 777


>gi|49616863|gb|AAT67238.1| ubiquitin specific protease 42 [Homo sapiens]
          Length = 1324

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 122/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL + +D M  
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  +   +NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 210 -------QKACLNGSN----KLDRHTQATTL------------------VCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|444514644|gb|ELV10629.1| Putative ubiquitin carboxyl-terminal hydrolase 50 [Tupaia
           chinensis]
          Length = 373

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 114/280 (40%), Gaps = 43/280 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++NA LQ L S SP V+  L       + K      TAF   ++D      
Sbjct: 45  GLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYMTALQKDCSEVATAFAYLMTDM----- 99

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
                     L      SP +F + L N  P+       +  Q+DAQEFL ++++++H E
Sbjct: 100 ---------WLGDSDCVSPEIFRSALGNLYPEF-----MKKTQQDAQEFLIYVLNELH-E 144

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK-S 380
            LK      S    +T                  K   + T     S ++ +F GQL+  
Sbjct: 145 ALKTYHRKRSYEKRSTQQCC-------------RKVIASET-----SIITQLFEGQLRYD 186

Query: 381 VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL--EGYRTSSTGNAGVV 438
           +V  + +  +   + F +L L I S+   +++D L+ F   + L        S  +    
Sbjct: 187 IVCLKCDNCAHKNEVFSILSLPIPSDYECSLQDCLQCFFQQDTLTWNNQMHCSLCDTMQE 246

Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
           TA ++  I    K++I HL RF        KL   + +PL
Sbjct: 247 TAVRA-SISKAPKVVIFHLKRFDIQGMTKRKLRTDIHYPL 285


>gi|156393850|ref|XP_001636540.1| predicted protein [Nematostella vectensis]
 gi|156223644|gb|EDO44477.1| predicted protein [Nematostella vectensis]
          Length = 386

 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 135/306 (44%), Gaps = 53/306 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL+N GN C+ N+ LQAL  C PF     ++ +   P     TL   +      D  +  
Sbjct: 24  GLVNFGNTCYCNSVLQALFFCRPF---RDKVLSYKPPSKRKETLLTCLA-----DLFNNI 75

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +S+KK + V+      +P  F A L+       N +     Q+DA EFL+++++ + D  
Sbjct: 76  ASQKKKVGVI------APKKFVARLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-- 122

Query: 323 LKLQG-----ESTSINGANTALVSLAEEDEWETVG-----------------PKNKSAVT 360
             LQG     +    + ++ ++ S        T+G                 P   ++  
Sbjct: 123 -LLQGEKVKEKEKEKHSSSGSISSKGSLSSASTIGSITPAIPNGTANCIINNPTTTNSNM 181

Query: 361 RTQSFLPSALSDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFS 419
           RT++   + + ++F G L +  +    ++ S+  + FL L +D+  E   +I   LR FS
Sbjct: 182 RTET---TWVHEMFEGTLTNETRCLCCESVSSKDESFLDLSVDV--EQNTSITHCLRGFS 236

Query: 420 APENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRF 476
           + E L   Y+           A+K ++++ L K+L LHL RF Y    Q  TKL   V F
Sbjct: 237 STETLCSEYKYFCETCCTKQEAQKRMRVKKLPKLLALHLKRFKYMEQLQRYTKLSYRVVF 296

Query: 477 PLQLVL 482
           P +L L
Sbjct: 297 PFELRL 302


>gi|395825355|ref|XP_003785902.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Otolemur
           garnettii]
          Length = 541

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 95/214 (44%), Gaps = 30/214 (14%)

Query: 280 PSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSI--NGANT 337
           P+ F AV + + P    S SG   Q+DAQEFL  +M+++H E+ +    +  I  NG   
Sbjct: 273 PTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERLHLEINRRGRRAPPILANGPAP 327

Query: 338 ALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPF 396
           A              P  +      +  L     D+F GQLKS +K Q     S T + F
Sbjct: 328 A--------------PPRRGGALLEEPELXXXXXDLFVGQLKSCLKCQACGYRSTTFEVF 373

Query: 397 LLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSK 451
             L L I    ++    ++ D   LF+  E LE             T + K + +Q   +
Sbjct: 374 CDLSLPIPKKGFAGGKVSLRDCFSLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPR 433

Query: 452 ILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LVLG 483
           IL+LHL RFS  S+GS K     V FPLQ L LG
Sbjct: 434 ILVLHLNRFS-ASRGSIKKSSVGVDFPLQRLSLG 466


>gi|296417169|ref|XP_002838233.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634156|emb|CAZ82424.1| unnamed protein product [Tuber melanosporum]
          Length = 1078

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 116/295 (39%), Gaps = 49/295 (16%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-----QELRTRDIPKAGYPTLT-AFVGFVSDF 256
           GL N GN C++NA LQ +    P  +       +   ++D P      L  AF   V   
Sbjct: 721 GLKNLGNTCYMNAVLQCMSGTIPLSRYFLDGSYKSHVSKDNPLGSRGVLAEAFAAIVRHL 780

Query: 257 DTPSGGSSKKKNISVLDI-GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 315
              SG  S    I++ D+ GR         + +N              Q+DAQEFL F++
Sbjct: 781 W--SGEYSFISPITIKDVAGR------LNEMFRNND------------QQDAQEFLEFLL 820

Query: 316 DQMHDEL--LKLQGESTSINGANTAL-----VSLAEEDEWETVGPKNKSAVTRTQSFLPS 368
           D +H++L      G+   +N           V LA   EW+     N S V         
Sbjct: 821 DGLHEDLNPHANHGKLRPLNDDEECRRERLPVQLASIIEWQRYTHHNYSVVV-------- 872

Query: 369 ALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVH--TIEDALRLFSAPENLE 425
              + F GQL S++      + S T  PF+ L L I +   +  T+ D L  F   E LE
Sbjct: 873 ---NWFQGQLSSMLSCLTCGRTSTTYSPFMYLSLPIPATKSNNFTLRDCLEEFVGEETLE 929

Query: 426 GYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
           G              A K + I  L  ILI+HL RF+       KL+  V  PL+
Sbjct: 930 GNDAWLCPRCKKARKATKKLTITRLPHILIIHLKRFTNRGPWRDKLNTFVDIPLR 984


>gi|395822175|ref|XP_003784399.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
           [Otolemur garnettii]
          Length = 375

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 115/285 (40%), Gaps = 53/285 (18%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++NA LQ L S SP V+  L       + K      TAF   ++D      
Sbjct: 47  GLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYMTALQKDCSEVATAFAYLMTDM----- 101

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
                     L      SP +F + L N  P        +  Q+DAQEFL ++++++H+ 
Sbjct: 102 ---------WLGDSDCVSPEIFRSALGNLYPAF-----MKKTQQDAQEFLIYVLNELHEA 147

Query: 322 LLKLQ----GESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
           L K       E  SI      +++               S +TR           +F GQ
Sbjct: 148 LKKYHRRRSYEKRSIQRCCRKVIA------------NETSIITR-----------LFEGQ 184

Query: 378 LK-SVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 436
           L  S+V  +    +   + F +L L I  E   +++D L+ F   + L     +    A 
Sbjct: 185 LNYSIVCLKCENCTYRNEVFTVLSLPIPCEYECSLQDCLQCFFQQDTLTW--NNQIRCAF 242

Query: 437 VVTAKKSVKIQTLS---KILILHLMRFSYGSQGSTKLHKSVRFPL 478
             T +++    ++S   KI++ HL RF        KL  ++ +PL
Sbjct: 243 CETNQETAVRASISKAPKIIVFHLKRFDIQGMMKRKLRTNIHYPL 287


>gi|348568324|ref|XP_003469948.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 42-like [Cavia porcellus]
          Length = 1224

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 114/300 (38%), Gaps = 62/300 (20%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD-FDTPS 260
           GL N GN CF NA LQ L   +P    +L    +      G+  +      ++   + P 
Sbjct: 108 GLQNLGNTCFANAALQCLTYTAPLANYMLSHEHSETCHAEGFCMMCIMQDHITQALNNPG 167

Query: 261 GGSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
                       D+ +P F  +  + +  +F             QEDA EFL   +D M 
Sbjct: 168 ------------DVIKPMFVINEMQRIASHFQIG---------EQEDAHEFLQHTVDAMQ 206

Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
           +  L    E      A T +                                 +FGG L+
Sbjct: 207 EACLSGSNELDRHTQATTLIC-------------------------------QVFGGYLR 235

Query: 380 SVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV- 437
           S V+    K  S T  P+L + L+I  +   TI +AL  F  PE L+G          + 
Sbjct: 236 SRVQCLNCKGVSDTFDPYLDITLEI--KGARTINEALAQFVKPEQLDGENCYQCSKCKIM 293

Query: 438 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQF 497
           V A K+  I   S +LIL L RFS  + G  K+ K V++P  L + R  +  P+ E + +
Sbjct: 294 VPASKNFTIHQSSNVLILSLKRFSNSTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIVY 350


>gi|74354215|gb|AAI02597.1| Ubiquitin specific peptidase 50 [Bos taurus]
 gi|296483086|tpg|DAA25201.1| TPA: ubiquitin specific peptidase 50 [Bos taurus]
          Length = 328

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 121/286 (42%), Gaps = 55/286 (19%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++NA LQ L S SP V+  L       + K      TAF   ++D     G
Sbjct: 50  GLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYINALQKDCSEVATAFAYVMTDMWL--G 107

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
            S               SP +F + L N  P     +  +  Q+DAQEFL ++++++H+ 
Sbjct: 108 DSD------------CVSPEIFRSALGNLYP-----VFMKKTQQDAQEFLIYVLNELHEA 150

Query: 322 LLKLQ----GESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
           L K       E  SI      +++             N+S++          ++ +F GQ
Sbjct: 151 LKKYHRRKAYEKRSIPRCCRKMIA-------------NESSI----------ITRLFEGQ 187

Query: 378 L-KSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 436
           L  S+V  +    +   + F ++ L I SE   +++D L+ F   + L     ++  +  
Sbjct: 188 LSYSIVCLKCENCTYKNEVFTIISLPIPSEYECSLQDCLQCFFQQDTLTW---NNQIHCS 244

Query: 437 VVTAKKSVKIQ-TLSKI---LILHLMRFSYGSQGSTKLHKSVRFPL 478
               K+   ++ T+SK+   ++ HL RF        KL   + +PL
Sbjct: 245 FCETKQEAAVRATISKVPKTIVFHLKRFDILGTMKRKLRTDIHYPL 290


>gi|322800426|gb|EFZ21430.1| hypothetical protein SINV_08883 [Solenopsis invicta]
          Length = 604

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 129/323 (39%), Gaps = 81/323 (25%)

Query: 194 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFV 253
           KS K+    GL N GN CF+N  LQ+  + S F + L ++          P L       
Sbjct: 236 KSTKEKKVVGLRNLGNTCFMNVVLQSFNNISHFCEYLTQM----------PCLEGIA--- 282

Query: 254 SDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS-----GR------- 301
             FD  +G  + +  I  +  GR    SM +A+L      V   +S     G+       
Sbjct: 283 --FDESTGPPTHRGRI--VTPGRAKEMSMSDALLAEELRKVLLGLSLGGSNGQAISPECL 338

Query: 302 --------PR-----QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEW 348
                   PR     Q+DA EFL++++D++H ELL+L             L  L      
Sbjct: 339 FLAIWKVVPRFRGYQQQDAHEFLTYMLDRLHTELLQL-------------LPRLGH---- 381

Query: 349 ETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDI---- 403
           E +G + K ++          ++ +FGG L SVV     +  S T +PF  L LDI    
Sbjct: 382 EPLGLRGKQSI----------VTAVFGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIPDRL 431

Query: 404 ------YSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILH 456
                   E V ++  +L  F   E L         N  G   + K   I  L  +L LH
Sbjct: 432 QRSRTKEQEEVCSLTYSLTRFFKVEELADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLH 491

Query: 457 LMRFSYGSQGSTKLHKSVRFPLQ 479
           + RF + +   +K+   V FP++
Sbjct: 492 IKRFRWCNSYRSKVDTQVDFPME 514


>gi|157127579|ref|XP_001661099.1| ubiquitin specific protease 2, putative [Aedes aegypti]
 gi|108872885|gb|EAT37110.1| AAEL010854-PA [Aedes aegypti]
          Length = 934

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 113/283 (39%), Gaps = 41/283 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ +Q L         L Q+  T       +  L  +   + D      
Sbjct: 605 GLWNIGNTCFMNSIIQCLSHTRELTNFLRQQSTTERGTSKDHKILAEYTKLIKDM---WS 661

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
           G+++  N S L         M+                    Q+DAQEFL F +D +H  
Sbjct: 662 GTTRSVNPSELKYAFSSKHRMYSGSA----------------QQDAQEFLRFFIDSLHCA 705

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP----SALSDIFGGQ 377
           L     ES      N A+    E+D+ +     N+   T    +      S + ++F G 
Sbjct: 706 L----NESVKREPINRAI----EDDDMD-----NRVKATMMWDWYSRVENSMIKNLFVGL 752

Query: 378 LKSVVKAQ-GNKASATVQPFLLLHLDIYSEAVHT-IEDALRLFSAPENLEGYRTSSTGNA 435
           L+S +K    N AS T  PF  L L + S      +E+ + +F   E ++G    +    
Sbjct: 753 LRSTLKCTYCNGASVTFDPFWDLSLPLPSTNSRCKLENCMDMFVKEEVMDGIDQPTCSRC 812

Query: 436 GV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 477
                  KS+ I+   K L++HL RFS  ++ S KL   V FP
Sbjct: 813 KARRKCTKSLTIERFPKYLVIHLKRFS-ETRWSNKLTNVVEFP 854


>gi|194763591|ref|XP_001963916.1| GF21001 [Drosophila ananassae]
 gi|190618841|gb|EDV34365.1| GF21001 [Drosophila ananassae]
          Length = 1296

 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 127/298 (42%), Gaps = 61/298 (20%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLL------QELRTRDIPKAGYPTLTAFVGFVSDF 256
            GL N GN CF+N+ +Q L       + L      +   T+D        L  F   + + 
Sbjct: 972  GLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSSSTKD-----QQILHEFAKLIQEM 1026

Query: 257  DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
             T     S    ++ +++ R FS                + +     Q+DAQEFL F +D
Sbjct: 1027 WT-----SNVHTVTPMELKRAFS--------------TKHRMYSDYNQQDAQEFLRFFLD 1067

Query: 317  QMHDELLK-LQGESTSI--NGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 373
             +H  L   ++GE+ +I  N ++     L    EW T   ++++++ R          D+
Sbjct: 1068 SLHSALNSGVKGETLNIDDNLSDNKKADLTW--EWYT---RHENSLVR----------DL 1112

Query: 374  FGGQLKSVVKAQ--GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSS 431
            F GQLKS +K    GN  S T  PF  L + + S +   +E  L LF   E L+G    +
Sbjct: 1113 FVGQLKSTLKCTTCGN-TSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREEVLDGDEMPT 1171

Query: 432  TGNAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDL 486
               A   T +K  K   IQ   K L++HL RFS      +KL   V FP    + R+L
Sbjct: 1172 C--AKCKTRRKCTKSFTIQRFPKYLVIHLKRFSETRW--SKLSNIVEFP---TMDREL 1222


>gi|328708865|ref|XP_003243820.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like
           [Acyrthosiphon pisum]
          Length = 792

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 123/282 (43%), Gaps = 47/282 (16%)

Query: 202 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           RGL N GN C++N+ LQ L S            T D+ K      + F  + S      G
Sbjct: 473 RGLQNLGNTCYMNSILQCLSS------------TEDLVKYFINIYSNFTNYKS---RTKG 517

Query: 262 GSSKKKNISVLDI----GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
             +K+ +  + ++    GR F    F+  +  +       +     Q+D+ EFL+ ++D 
Sbjct: 518 LVAKEFSNVIKNLWSQSGRGFQSQQFKDTIGEYK-----DMFKHYDQQDSHEFLTILLDW 572

Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
           +HD+L + + ++  I GA+        E++W      N S + +           +F GQ
Sbjct: 573 LHDDLNQPE-DNRVILGASKE----TGEEDWGNWTKANNSIIQQ-----------LFYGQ 616

Query: 378 LKSVVKAQGN-KASATVQPFLLLHLDIYSEAVH-TIEDALRLFSAPENLEGYRTSSTGNA 435
            KS V      + S T +PFL L L + SE    T+ D L+L+   E++ G+        
Sbjct: 617 QKSTVSCDTCFEKSVTFEPFLSLSLPLPSEGNKCTLSDCLQLYLNGESICGWHCPKCKRN 676

Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 477
               A K + I  L   LI+HL RFS  S G  K + +V FP
Sbjct: 677 R--DATKKLDIMRLPPYLIIHLKRFS--SNGYKK-NSNVEFP 713


>gi|444522041|gb|ELV13282.1| Ubiquitin carboxyl-terminal hydrolase 21 [Tupaia chinensis]
          Length = 673

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 125/301 (41%), Gaps = 52/301 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 258
           GL N GN CFLNA LQ L S  P     L ++ R +++P  G    LT AF   +     
Sbjct: 330 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 388

Query: 259 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
           P             D     +P+ F AV + + P    S SG   Q+DAQEFL  +M+++
Sbjct: 389 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 430

Query: 319 HDEL---------LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 369
           H E+         +   G + S      AL+   E  + +      K  + R      S 
Sbjct: 431 HLEINRRGRRAPPILANGPAPSAPRRGGALLEEPELSDDDRANLMWKRYLERED----SK 486

Query: 370 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 424
           + D+F GQLKS +K Q     S T + F  L L I    ++    ++ D   LF+  E L
Sbjct: 487 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 546

Query: 425 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVL 482
           E             T + K + +Q   +IL+L  ++         K    V FPLQ L L
Sbjct: 547 ELENAPVCDRCRQKTRSTKKLTVQRFPRILVLRSIK---------KSSVGVDFPLQRLSL 597

Query: 483 G 483
           G
Sbjct: 598 G 598


>gi|398399006|ref|XP_003852960.1| hypothetical protein MYCGRDRAFT_85668 [Zymoseptoria tritici IPO323]
 gi|339472842|gb|EGP87936.1| hypothetical protein MYCGRDRAFT_85668 [Zymoseptoria tritici IPO323]
          Length = 820

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 131/306 (42%), Gaps = 34/306 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL N G+ C++NATLQAL +  P   L+ +         GY  +        ++    G 
Sbjct: 437 GLKNFGSTCYMNATLQALSATIPLTILVMD--------DGYKNMVQ----KENWKGSRGL 484

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
             +  +  V ++ R     +      NF   + ++     +QED QEF SF++D +H++ 
Sbjct: 485 LPEMYSNVVRELWRGNVDFIKPTTFFNFCGRLNSTFKDPSQQEDTQEFFSFVVDCLHEDF 544

Query: 323 LKLQGESTSINGANTALVSL--AEEDEWETVGPKNKSAVTRTQSFLP---SALSDIFGGQ 377
                   + + A   L  L  AEE   E + P+   A T    +     S L+ IF GQ
Sbjct: 545 --------NAHWAKPPLRELTPAEEATRERM-PRLLVAKTEWDRYTHRENSFLTSIFYGQ 595

Query: 378 LKSVVKAQ-GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 436
             S V+    N  S    P+ LL ++I       ++D LR     E L+     +  N  
Sbjct: 596 QSSRVRCTVCNATSTQYDPWALLQVEIPEAREAQLQDCLRNHFGDELLDADNQWTCTNCK 655

Query: 437 V-VTAKKSVKIQTLSKILILHLMRFSYGSQG--STKLHKSVRFPLQ-LVLGRDLLVTPS- 491
           V   A K + I      L++ L RF    +     K+H +VRFPL+ L +G  +L  PS 
Sbjct: 656 VPRRATKKLTITRAPPFLVIGLKRFKTHPRTGEQRKIHTNVRFPLEGLDMGEFILPPPSL 715

Query: 492 --AEVL 495
             AE++
Sbjct: 716 QEAEII 721


>gi|393240409|gb|EJD47935.1| cysteine proteinase [Auricularia delicata TFB-10046 SS5]
          Length = 1128

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 119/289 (41%), Gaps = 41/289 (14%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
            GL N GN C++NAT+Q L +  PF +   + R +             V  V+   T    
Sbjct: 769  GLKNLGNTCYMNATIQCLSATVPFARFFTDGRWKTA-----------VNMVNPLGTKGQL 817

Query: 263  SSKKKNI--SVLDIGRPF-SPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
            +S    +   +     P+ SP  F   +  F     NS      Q D QEFLS ++D +H
Sbjct: 818  ASAFATLLHEMWHGDLPYRSPYAFRKTVCAFATQFNNS-----EQHDCQEFLSALLDGLH 872

Query: 320  DELLKLQG----ESTSINGA--NTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 373
            ++L ++      E+T    A   T  V +A E EW+    ++ S +            D 
Sbjct: 873  EDLNRIIAKPNVETTPEREAELETLAVQIASEQEWQIYQMRDDSLIV-----------DY 921

Query: 374  FGGQLKSVVKA-QGNKASATVQPFLLLHLDIYS-EAVH--TIEDALRLFSAPENLEGYRT 429
            F GQ ++ V+    +K S T   F+ L L I +   V+  T+   L  F   E ++    
Sbjct: 922  FQGQFRNRVQCLTCHKTSTTYNSFMYLSLPIPAGRGVNKVTLNQCLDHFVREEVIDRENA 981

Query: 430  SSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 477
             +  N      A   + +  L  +L++HL RFS     + KL   V FP
Sbjct: 982  WNCPNCKCPRRATTQLSLSRLPPVLLIHLKRFSVKGPFTDKLETVVDFP 1030


>gi|426255424|ref|XP_004021348.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 42 [Ovis aries]
          Length = 1264

 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 122/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 170

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL + +D M  
Sbjct: 171 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 208

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  +   +NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 209 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 239

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 240 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 295

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 296 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 352

Query: 497 FL 498
           ++
Sbjct: 353 YV 354


>gi|115451255|ref|NP_001049228.1| Os03g0190800 [Oryza sativa Japonica Group]
 gi|24756890|gb|AAN64154.1| Putative ubiquitin-specific protease 3 [Oryza sativa Japonica
           Group]
 gi|108706601|gb|ABF94396.1| Ubiquitin carboxyl-terminal hydrolase 4, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113547699|dbj|BAF11142.1| Os03g0190800 [Oryza sativa Japonica Group]
 gi|125542717|gb|EAY88856.1| hypothetical protein OsI_10330 [Oryza sativa Indica Group]
 gi|125585222|gb|EAZ25886.1| hypothetical protein OsJ_09723 [Oryza sativa Japonica Group]
 gi|215697258|dbj|BAG91252.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 366

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 124/289 (42%), Gaps = 39/289 (13%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELR-----TRDIPKAGYPTLTAFVGFVSDFD 257
           GL N GN C+ N+ LQAL  C PF + L E       T D+       L          D
Sbjct: 24  GLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKSTGDVEDNMLTCLA---------D 74

Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
             S  S++KK   V+      +P  F   LK       N I      +DA EFL+F++++
Sbjct: 75  LFSQISNQKKKTGVI------APKRFIQRLKK-----QNEIFRSYMHQDAHEFLNFLLNE 123

Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 377
           + D +L+ + +  +    N++L       +  + GP N       +  +P+ +   F G 
Sbjct: 124 LVD-ILEKESKVVAEPCENSSL-------KKNSNGPINVQLNGTKKEPVPTLVHKCFQGI 175

Query: 378 LKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY-RTSSTGNA 435
           L +  +  +    +   + F  L LDI  E   +I   L+ FS+ E L    +       
Sbjct: 176 LTNETRCLRCETVTDRDETFFDLSLDI--EQNSSITSCLKNFSSTETLNAEDKFFCDKCC 233

Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 482
            +  A+K +KI+    IL++HL RF Y  Q     KL   V FPL+L L
Sbjct: 234 SLQEAQKRMKIKKPPNILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL 282


>gi|413955111|gb|AFW87760.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
           [Zea mays]
          Length = 813

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 123/276 (44%), Gaps = 58/276 (21%)

Query: 211 CFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNIS 270
           CFLN  LQ ++   P   LL +LR  D P    P     +GF          S K     
Sbjct: 142 CFLNCVLQCMVHTVP---LLLKLRKADHPD---PCPRVSIGFCC------YCSLKHHVDE 189

Query: 271 VLDI-GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGES 329
            + + G  F P +F   LK+ + +  + +     Q+DAQEFL  ++D++           
Sbjct: 190 CMRLSGSSFYPEIFVNHLKSISSNFRSGV-----QQDAQEFLRCLLDKL----------- 233

Query: 330 TSINGANTALVSLAEEDEWETVGPK----NKSAVTRTQSFLPSALSDIFGGQLKSVVKA- 384
                           DE +++ P+    + S+   + +   S + +IF G LKS ++  
Sbjct: 234 ----------------DE-DSIAPRFSEESSSSEESSSTEEGSVVKEIFSGCLKSQLRCP 276

Query: 385 QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSV 444
           + N  S   +PFL L LD+    V T+ DAL+ F+  E ++ +     G    V  +K  
Sbjct: 277 ECNHYSDKSEPFLDLSLDL--NMVETLMDALQSFTNTELIKDFMCD--GCKSRVNLEKHF 332

Query: 445 KIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 480
           KI+   ++L++HL RF   +   +K+   V+FP++L
Sbjct: 333 KIEQAPEVLVIHLKRF---TNFESKIRDKVKFPIEL 365


>gi|356518408|ref|XP_003527871.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine
           max]
          Length = 1125

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 113/289 (39%), Gaps = 55/289 (19%)

Query: 198 DLLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDF 256
           +L P GL+N GN C+ NA LQ L    P    LLQ L  +      +     F   +   
Sbjct: 596 ELCPFGLVNCGNSCYANAVLQCLAFTPPLTAYLLQGLHLKSCANKKWCFTCEFERLI--- 652

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
                       +   D     SP    + L+N    +     G  R+EDA EFL  ++D
Sbjct: 653 ------------LKSKDTKSAVSPMGIISHLQNIGSQL-----GNGREEDAHEFLRHVID 695

Query: 317 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 376
            M    L   G    +N + +      EED                     + +   FGG
Sbjct: 696 TMQSVCLTEAG----VNASGSL-----EED--------------------TTLMGQTFGG 726

Query: 377 QLKSVVKAQGNKASATVQPFLL-LHLDIYSEAVHTIEDALRLFSAPENLEGY-RTSSTGN 434
            L+S +K       +  Q  ++ L ++I  E + T+ +ALR F++ E L+G  +      
Sbjct: 727 YLRSKIKCMRCGGKSEHQERMMDLTVEIEGE-ITTLVEALRRFTSTETLDGENKYHCVRC 785

Query: 435 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLG 483
                AKK + +     +L + L RF  G  G  KL+K ++FP  L L 
Sbjct: 786 KSYEKAKKKLTVSEAPNVLTVALKRFQSGKFG--KLNKPIQFPEILNLA 832


>gi|224088124|ref|XP_002308332.1| predicted protein [Populus trichocarpa]
 gi|222854308|gb|EEE91855.1| predicted protein [Populus trichocarpa]
          Length = 629

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 94/217 (43%), Gaps = 37/217 (17%)

Query: 202 RGLINSGNLCFLNATLQALMSCSPFVQLL-----QELRTRDIPKAGYPTLTAFVGFVSDF 256
           RGL N GN CF+N+ +Q L      V        +E+   ++         AF   +S  
Sbjct: 32  RGLQNLGNTCFMNSAIQCLAHTPKLVDYFLGDYGKEINQENLLGTKGELALAFGDLLSKL 91

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
            TP                 P +P++F+  L +F P      SG   Q D+QEFLSF++D
Sbjct: 92  WTPRDT--------------PVAPAIFKRKLADFAP----QFSGY-NQHDSQEFLSFLLD 132

Query: 317 QMHDELLKLQGE-STSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 375
            +H++L +++ +   +I  A   L  +  E+ W     +N S +            D+  
Sbjct: 133 GLHEDLNRVKSKPYIAIKDAEGRLDEVVAEEYWRNHLARNDSIIV-----------DLCQ 181

Query: 376 GQLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTI 411
           GQ +S +V    NK S T  PF+ L L + S  + T+
Sbjct: 182 GQYQSTLVCPACNKKSVTFDPFMYLSLPLPSTTMRTM 218


>gi|47226066|emb|CAG04440.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 535

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 113/284 (39%), Gaps = 60/284 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CFLN+ LQ L   +PF   +L    ++   + G+  +      +      +G
Sbjct: 30  GLQNMGNTCFLNSALQCLTYTAPFANYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANTG 89

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
              K   I VL+          + + K+F             QEDA EFL + +D M   
Sbjct: 90  NVIKP--IGVLN--------ELKRIAKHFR---------YGSQEDAHEFLRYTVDAMQKS 130

Query: 322 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNK-SAVTRTQSFLPSALSDIFGGQLKS 380
            L                             P  K    T+  +F+      +FGG L+S
Sbjct: 131 CL-----------------------------PGTKLDRQTQATTFI----HQVFGGYLRS 157

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT-SSTGNAGVV 438
            VK    KA S T  PFL + L+I  +   ++  AL  F  PE L+G      T    +V
Sbjct: 158 RVKCLNCKAVSDTFDPFLDIPLEI--KTAPSVSKALEQFVKPEQLDGENAYKCTKCKKMV 215

Query: 439 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 482
           TA K   I   + +L L L RF+  S G  K+ K V++P  L L
Sbjct: 216 TASKRFTIHRSANVLTLALKRFANFSGG--KITKDVKYPEYLDL 257


>gi|343474167|emb|CCD14121.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 555

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 124/305 (40%), Gaps = 33/305 (10%)

Query: 202 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           RG+IN GN C+LN+  Q L S       L +   RD+   G  +      F         
Sbjct: 227 RGMINLGNTCYLNSVTQVLASTPLGSYFLYDNYARDVVNVGEGSCRLVNSFCFVV----- 281

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
                + +  +D   P SPS F    KN   ++ N+ SG   Q+DA EFL  +++ +H+ 
Sbjct: 282 -----RELYRIDCTLPVSPSPF----KNAISELSNTFSGF-LQQDANEFLRIVLEGLHNG 331

Query: 322 LLKLQGESTSINGANTALVSLAE--EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 379
           L             +T + S AE  +  W+    +N S V    +F           +  
Sbjct: 332 LNDRVNVKVIPTEIDTMVGSDAEIAKRFWDQHIQRNNSVVVDKCAF----------QERS 381

Query: 380 SVVKAQGNKASATVQPFLLLHLDIYSEAVH-TIEDALRLFSAPENLEG---YRTSSTGNA 435
           S+V     K S +  P L + + I  E    +IED L  +   E L     Y  SS    
Sbjct: 382 SIVCPLCRKVSRSFTPLLGIDVPIPVETADISIEDCLNAYCREEKLGSDSLYHCSSCKQ- 440

Query: 436 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVL 495
             V A K + + +L KIL + + RFS   +  +KL K V F  +L +G  +  T    V 
Sbjct: 441 -YVDASKQLLLYSLPKILFVTIKRFSSHGEILSKLVKRVFFRKELDMGPYICSTIEKTVY 499

Query: 496 QFLNV 500
             + V
Sbjct: 500 TLVGV 504


>gi|344289865|ref|XP_003416661.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Loxodonta
           africana]
          Length = 1431

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 121/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL   +D M  
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQHTVDAM-- 209

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
                  +   +NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 210 -------QKACLNGSN----KLDRHTQATTL------------------VCQIFGGYLRS 240

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L L L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353

Query: 497 FL 498
           ++
Sbjct: 354 YV 355


>gi|195482373|ref|XP_002102021.1| GE17938 [Drosophila yakuba]
 gi|194189545|gb|EDX03129.1| GE17938 [Drosophila yakuba]
          Length = 1409

 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 123/289 (42%), Gaps = 58/289 (20%)

Query: 203  GLINSGNLCFLNATLQALMSCSPFVQLLQELR------TRDIPKAGYPTLTAFVGFVSDF 256
            GL N GN CF+N+ +Q L       + L+         T+D        L  F   + + 
Sbjct: 1085 GLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSSSTKD-----QQILHEFAKLIQEM 1139

Query: 257  DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
             T     S    ++ +++ R FS                + +     Q+DAQEFL F +D
Sbjct: 1140 WT-----SNVHTVTPMELKRAFS--------------TKHRMYSDYNQQDAQEFLRFFLD 1180

Query: 317  QMHDELLK-LQGESTSI--NGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 373
             +H  L   ++GE+ +I  N ++     L    EW T   ++++++ R          D+
Sbjct: 1181 SLHSALNSGVKGETLNIDDNLSDNKKADLTW--EWYT---RHENSLVR----------DL 1225

Query: 374  FGGQLKSVVKAQ--GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSS 431
            F GQLKS +K    GN  S T  PF  L + + S +   +E  L LF   E L+G    +
Sbjct: 1226 FVGQLKSTLKCTTCGN-TSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREEVLDGDEMPT 1284

Query: 432  TGNAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 477
               A   T +K  K   IQ   K L++HL RFS      +KL   V FP
Sbjct: 1285 C--AKCKTRRKCTKSFTIQRFPKYLVIHLKRFSETRW--SKLSNIVEFP 1329


>gi|431908477|gb|ELK12073.1| Ubiquitin carboxyl-terminal hydrolase 2 [Pteropus alecto]
          Length = 570

 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 111/264 (42%), Gaps = 40/264 (15%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF+N+ LQ L +        LQ L  RD+  +      A    + +F     
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSS----NAHTALMEEF----- 319

Query: 262 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 318
                K I  +    P    SPS F+  ++ + P           Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTMWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370

Query: 319 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 378
           H+E+ ++     S   +   L  L +++       K +    +      S + D+F GQL
Sbjct: 371 HNEVNRVTVRPKS---SPENLDHLPDDE-------KGRQMWRKYLEREDSRIGDLFVGQL 420

Query: 379 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 432
           KS +        +TV  PF  L L I    Y E   T+ D +RLF+  + L+G  + +  
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 478

Query: 433 GNAGVVTAKKSVKIQTLSKILILH 456
                    K   IQ   KIL+LH
Sbjct: 479 RCRARKRCIKKFSIQRFPKILVLH 502


>gi|406603343|emb|CCH45135.1| Ubiquitin carboxyl-terminal hydrolase [Wickerhamomyces ciferrii]
          Length = 815

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 123/296 (41%), Gaps = 42/296 (14%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 262
           GL N GN C++N+ +Q L+   PF+Q       ++       +     G ++ F      
Sbjct: 456 GLYNIGNTCYMNSIIQCLLGTPPFLQFFLNGSYKE--HVNINSKLGTKGIMAKFFAELAQ 513

Query: 263 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 322
           +  K+N      GR + P  F+  + +      N+      Q+D  EFL+F++D +H++L
Sbjct: 514 AVFKQN------GRVYEPKNFKIAIGSLNTSFKNN-----DQQDCSEFLNFVLDGLHEDL 562

Query: 323 LKLQGESTSINGANTAL--------VSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
            + +G    +    T          + LA   EWE     N SAV             +F
Sbjct: 563 NE-EGNRPRLGDLTTEEEELRERMPIRLASVIEWERYLKTNYSAVVA-----------LF 610

Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVH------TIEDALRLFSAPENLEG- 426
            GQ  S +K  +    S T Q F +L L I  E V       +++  L  F+  E L+G 
Sbjct: 611 QGQYLSQLKCLECGTTSTTYQAFSVLSLPIPQELVQSPLEKISLKRCLEEFTKLEVLDGD 670

Query: 427 YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 482
            R + +    +  + K + I  L   L++HL RF  G     K+   + +P ++ L
Sbjct: 671 DRWNCSKCKQLRKSTKKITITRLPSNLVIHLKRFKTGV-NLQKITTFIEYPFEMDL 725


>gi|260939768|ref|XP_002614184.1| hypothetical protein CLUG_05670 [Clavispora lusitaniae ATCC 42720]
 gi|238852078|gb|EEQ41542.1| hypothetical protein CLUG_05670 [Clavispora lusitaniae ATCC 42720]
          Length = 831

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 126/305 (41%), Gaps = 53/305 (17%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLL-------------QELRTRDIPKAGYPTLTAF 249
           GL N GN C++N  +Q L +                     Q +   +         T++
Sbjct: 446 GLTNLGNSCYMNCIIQCLAATPQMTDFFFKKGDKSAEPSYKQHINMNNKLGTKGVITTSY 505

Query: 250 VGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQE 309
           V  +S+    SGGS              FSP++F+ ++ + +P    + S    Q+D  E
Sbjct: 506 VKLLSNMLNNSGGS--------------FSPNVFKKIMGSLSPGAQFANSD---QQDCVE 548

Query: 310 FLSFIMDQMHDEL----LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSF 365
           FL++I+D +H++L    +K   E  SI   +T      E++    V P   ++    + +
Sbjct: 549 FLNYILDSLHEDLNQRAVKNAEERASIMELST------EQERAREVLPIRLASTIEWERY 602

Query: 366 LP---SALSDIFGGQLKSVVKAQGNK-ASATVQPFLLLHLDI------YSEAVHTIEDAL 415
           L    S + D F GQ  S +K    +  S T   F +L L I      Y  +V ++   L
Sbjct: 603 LKLNFSVIVDYFQGQYLSQLKCLVCQLTSTTYNTFSVLSLPIPESDARYPRSV-SLSQCL 661

Query: 416 RLFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGS-TKLHKS 473
            LF+  E L+             T + K + I  L K LI+H  RF Y S G   KL   
Sbjct: 662 DLFTETELLDDDNKWHCPRCNTFTRSTKKISITRLPKALIIHFKRFGYESSGRFKKLDTF 721

Query: 474 VRFPL 478
           +++P+
Sbjct: 722 IKYPV 726


>gi|37722101|gb|AAR01977.1| DUB1 [Mus musculus]
          Length = 729

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 121/302 (40%), Gaps = 64/302 (21%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN CF NA LQ L    P    +L    ++     G+  +      ++   +  G
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTHITQALSNPG 170

Query: 262 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 320
                      D+ +P F  +    + ++F             QEDA EFL + +D M  
Sbjct: 171 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAMQK 210

Query: 321 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 380
             L         NG+N     L    +  T+                  +  IFGG L+S
Sbjct: 211 ACL---------NGSN----KLDRHTQATTL------------------VCQIFGGYLRS 239

Query: 381 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 436
            VK    K  S T  P+L + L+I  +A  ++  AL  F  PE L+G   Y+ S      
Sbjct: 240 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVTKALEQFVKPEQLDGENSYKCSKCKK-- 295

Query: 437 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEVLQ 496
           +V A K   I   S +L + L RF+  + G  K+ K V++P  L + R  +  P+ E + 
Sbjct: 296 MVPASKRFTIHRSSNVLTISLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 352

Query: 497 FL 498
           ++
Sbjct: 353 YV 354


>gi|10441889|gb|AAG17222.1|AF217979_1 unknown [Homo sapiens]
          Length = 550

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 103/223 (46%), Gaps = 29/223 (13%)

Query: 279 SPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTA 338
           +P+ F AV + + P    S SG   Q+DAQEFL  +M+++H E+ + +G       AN  
Sbjct: 278 NPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERLHLEINR-RGRRAPPILANGP 331

Query: 339 LVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPSALSDIFGGQLKSVVKAQG-N 387
           + S       L EE E       N   K  + R  S     + D+F GQLKS +K Q   
Sbjct: 332 VPSPPRRGGALLEEPELSDDDRANLMWKRYLEREDS----KIVDLFVGQLKSCLKCQACG 387

Query: 388 KASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT-AKK 442
             S T + F  L L I    ++    ++ D   LF+  E LE             T + K
Sbjct: 388 YRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEELESENAPVCDRCRQKTRSTK 447

Query: 443 SVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LVLG 483
            + +Q   +IL+LHL RFS  S+GS K     V FPLQ L LG
Sbjct: 448 KLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRLSLG 489


>gi|121710222|ref|XP_001272727.1| ubiquitin C-terminal hydrolase, putative [Aspergillus clavatus NRRL
            1]
 gi|119400877|gb|EAW11301.1| ubiquitin C-terminal hydrolase, putative [Aspergillus clavatus NRRL
            1]
          Length = 1111

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 128/301 (42%), Gaps = 32/301 (10%)

Query: 200  LPR-GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYP-TLTAFVGFVSDFD 257
            LPR GL N G  C++N+T+Q L +     +   + R R   +  +  +     G  ++  
Sbjct: 740  LPRTGLTNFGVTCYMNSTIQCLSATIMLSKFFIDNRFRYYVQKNWKGSQGVMPGLFANLI 799

Query: 258  TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
                 S  K ++ V+       P+ F    +NF   + N      RQ+DA+EF  F++D 
Sbjct: 800  R----SLWKNDVEVI------MPTSF----RNFCGRL-NQEWAIDRQQDAKEFFDFVVDC 844

Query: 318  MHDELLKLQGESTSINGANTALVSLAEEDEWET----VGPKNKSAVTRTQSFLPSALSDI 373
            +H++L        +IN   T L  L  E+E +     V   ++    R      S +S +
Sbjct: 845  LHEDL--------NINWQRTPLRPLTFEEEMQRERMPVPKVSRIEWDRYCHREESFISSL 896

Query: 374  FGGQLKSVVKAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSST 432
            F GQ  S ++    K  S T + F  + ++I S     I   LR +   E L G      
Sbjct: 897  FAGQHASRLRCTTCKRTSTTYEAFYSISVEIPSTGTGDIYQCLRSYCQEEMLSGDEVWKC 956

Query: 433  GNAGV-VTAKKSVKIQTLSKILILHLMRFSYG-SQGSTKLHKSVRFPLQLVLGRDLLVTP 490
                    A K + I    +IL++H  RFS   +Q + K+H  + FPL  +   D ++ P
Sbjct: 957  PYCKCEREATKQIIITRAPQILVVHFKRFSASKTQSARKIHTPIDFPLHGLRMDDFVIYP 1016

Query: 491  S 491
            +
Sbjct: 1017 N 1017


>gi|341877732|gb|EGT33667.1| hypothetical protein CAEBREN_23731 [Caenorhabditis brenneri]
          Length = 434

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 131/299 (43%), Gaps = 49/299 (16%)

Query: 208 GNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKK 267
           GN C+ N+ +QAL  C PF + +   +      +   TL   +      D     +++K+
Sbjct: 44  GNTCYCNSVIQALFFCRPFREKILNYKQNLRKSSTKETLVTCLA-----DLFQNITTQKR 98

Query: 268 NISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELL---- 323
            +  +      +P  F   LK       N +     Q+DA EF +++++ + + LL    
Sbjct: 99  KVGTI------APKRFITKLKK-----ENELFDNYMQQDAHEFFNYLLNTISETLLVEKN 147

Query: 324 ----------KLQGESTSINGANTALVSLAEEDEWETVGPKNKSA----VTRTQSFLPSA 369
                      ++  + S+N A +A  SL  E+    VG +N +A     TR Q+   + 
Sbjct: 148 AERDRTARSGTIKRGNVSVNLA-SATASLPGEN---GVGDRNGAAGEANDTRNQA-NNTW 202

Query: 370 LSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-- 426
           + DIF G L +  +       S+  + FL L +D+  E   +I   LR+FS  E L G  
Sbjct: 203 IHDIFQGVLTNETRCLSCETVSSKDEKFLDLSIDV--EQNTSISHCLRVFSETETLCGDQ 260

Query: 427 -YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY--GSQGSTKLHKSVRFPLQLVL 482
            Y   +  +     A+K ++I+T   +L LHL RF Y       TKL   V FPL+L L
Sbjct: 261 KYFCETCSSKQ--EAQKRMRIKTPPPVLALHLKRFKYVDSLNRHTKLSYRVVFPLELRL 317


>gi|432892779|ref|XP_004075833.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Oryzias
           latipes]
          Length = 667

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/187 (33%), Positives = 89/187 (47%), Gaps = 29/187 (15%)

Query: 304 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ 363
           Q+DAQEFL F++D +H+E+ ++   S    G       L +E++    G K  S     +
Sbjct: 419 QQDAQEFLRFLLDGLHNEVNRV---SVRPRGTAEDFDHLQDEEK----GKKMWSKYVERE 471

Query: 364 SFLPSALSDIFGGQLKSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLF 418
               S + D+F GQLKS +        +TV  PF  L L I    Y E   ++ D +RLF
Sbjct: 472 D---SKIVDLFVGQLKSSLTCSHCGFCSTVFDPFWDLSLPISKKSYGEV--SLMDCMRLF 526

Query: 419 SAPENLEG------YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 472
           +  + L+G      YR  +          K  +IQ   KIL+LHL RFS   + S KL  
Sbjct: 527 TKEDVLDGDEKPTCYRCKARRR-----CTKKFRIQKFPKILVLHLKRFSEARRTS-KLST 580

Query: 473 SVRFPLQ 479
            V FPL+
Sbjct: 581 FVNFPLK 587


>gi|322801296|gb|EFZ21983.1| hypothetical protein SINV_10772 [Solenopsis invicta]
          Length = 886

 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 123/285 (43%), Gaps = 37/285 (12%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD--FDTP 259
           GL N GN CF+N+ +Q L +  P ++ LL E    DI         A +   S    +  
Sbjct: 548 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINTTTSSMKGALIKAFSQVIHELW 607

Query: 260 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 319
             G     N + L           ++ ++ F P           Q+DAQEFL ++++ +H
Sbjct: 608 EVGGDHVVNTTAL-----------KSQIQRFAPRFMGY-----SQQDAQEFLRYLLEGLH 651

Query: 320 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL---PSALSDIFGG 376
           +++ ++  +   I+G           D +  +    + AV   + +L    S + D+F G
Sbjct: 652 EDVNRVTTKLPPIHGDI--------PDSYTDM----QKAVESWKRYLRSEDSTIVDVFVG 699

Query: 377 QLKSVVKAQG-NKASATVQPFLLLHLDIYSEA-VHTIEDALRLFSAPENLEGYRTSSTGN 434
           QL+S ++    +  S T+ PF  L L I + +    +   L  F+  E L+G    +   
Sbjct: 700 QLRSSLRCTSCDHVSVTLDPFWDLSLPIPARSGTVKLSQCLEHFTREEVLDGDEKPTCSK 759

Query: 435 AGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
             +     KS  IQ   KIL++HL RFS   +   KL+  V FPL
Sbjct: 760 CQMRRKCTKSFSIQKFPKILVIHLKRFSPMERFRGKLNVMVDFPL 804


>gi|410961319|ref|XP_003987231.1| PREDICTED: LOW QUALITY PROTEIN: putative ubiquitin
           carboxyl-terminal hydrolase 50-like [Felis catus]
          Length = 381

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 118/296 (39%), Gaps = 49/296 (16%)

Query: 192 PVKSVKDLLPR-----GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPT 245
           PVK V++  P      GL N GN C++NA LQ L S SP  +  L       + K     
Sbjct: 29  PVKEVEENQPHSQGVTGLRNLGNTCYMNAILQCLCSISPLAEYFLSGKYITALQKDCSEV 88

Query: 246 LTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 305
            TAF   ++D                L      SP +F +   N  P        +  Q+
Sbjct: 89  ATAFAYVMTDM--------------WLGDSECVSPEIFRSAFGNLYPAF-----MKKTQQ 129

Query: 306 DAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSF 365
           DAQEFL ++++++H+ L K   +S                       P+      +T + 
Sbjct: 130 DAQEFLIYVLNELHESLKKCHRKSYEKGSI-----------------PR---CCRKTIAN 169

Query: 366 LPSALSDIFGGQLK-SVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 424
             S ++ +F GQL  S++  +    +   + F +L L I S+   +++D L+ F   + L
Sbjct: 170 EVSIITQLFEGQLNYSIMCLKCENCTYKNEVFTILCLPIPSDYECSLQDCLQCFFQQDTL 229

Query: 425 EGYRT--SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 478
             +     S       TA ++  I    K++I HL RF        KL   + +PL
Sbjct: 230 TWHNQIHCSFCETKQETAVRA-SISKAPKVIIFHLKRFDILGTMKRKLRTDIHYPL 284


>gi|398020768|ref|XP_003863547.1| ubiquitin hydrolase, putative [Leishmania donovani]
 gi|322501780|emb|CBZ36862.1| ubiquitin hydrolase, putative [Leishmania donovani]
          Length = 538

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 136/345 (39%), Gaps = 85/345 (24%)

Query: 201 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPS 260
           PRG++N+ N CF+N+ LQALM    F QL   +      +   PTL     +   +  P 
Sbjct: 121 PRGIMNNSNFCFMNSMLQALMFIPSFAQLTVSVSCDAQARQLCPTLATLGKWTLQYWKP- 179

Query: 261 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVP----NSISGRPR------------- 303
            G ++   I         +P++         P +P    NS SG PR             
Sbjct: 180 -GFTRLAMI---------APTLM--------PRLPAGANNSNSGAPRSAVVPASQRILDG 221

Query: 304 --QEDAQEFLSFIMDQMHDELLKLQ----------------------------------G 327
             QEDAQEFL  +++++H+EL+ L+                                  G
Sbjct: 222 SVQEDAQEFLQKLLERVHEELVGLEEAFQQADASEAATESEMGLIAPAATTTTASGGGGG 281

Query: 328 ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA--LSDIFGGQLKSVVKA- 384
                +  + A  S   +  W  V  K K AV   +     +  L+ IFGG L+S ++  
Sbjct: 282 GGGRADAPDDATASTFHKKGWTFVKGKEKLAVREHEDVQGQSKLLASIFGGTLESHLQGK 341

Query: 385 --QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKK 442
             Q ++ S  ++ +  L +D+      T+E AL      E +  Y +           KK
Sbjct: 342 QRQRDRVSVLIERYYCLPVDVGFAPECTVEQALERTFMTERI--YDSEHEKK-----LKK 394

Query: 443 SVKIQTLSKILILHLMRFSYGSQGS-TKLHKSVRFPLQLVLGRDL 486
           ++++  L  +L L L R++   +G   KL   VR    L++ R +
Sbjct: 395 TLRLGRLPSVLFLQLRRWAVTREGELVKLDNVVRIKRTLLIPRTI 439


>gi|189201425|ref|XP_001937049.1| ubiquitin carboxyl-terminal hydrolase 2 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187984148|gb|EDU49636.1| ubiquitin carboxyl-terminal hydrolase 2 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 1083

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 122/287 (42%), Gaps = 34/287 (11%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQLLQELR-TRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL+N G  C++N+ +Q L        L    R  R++ +  +      +        P  
Sbjct: 703 GLLNFGVTCYMNSVVQCLSGHLLLSDLFISQRYQRELQRENWKGTKGIL--------PEA 754

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
            ++   N+   D+     PS F  +  +F     N   G   Q+DA+EFL F++D MH++
Sbjct: 755 YATLLSNLYKGDVTS-VRPSTFRRICGHF-----NRQWGIDEQQDAKEFLEFVLDYMHED 808

Query: 322 LLKLQGESTSINGANTALVSLAEEDEW-ETVGPKNKSAVT---RTQSFLPSALSDIFGGQ 377
           +        ++    T L  L +++E      P+  SA+    R Q    S +  +F GQ
Sbjct: 809 M--------NLTWNKTPLKPLTDQEELTRERYPRQYSAMIEWRRYQHRDMSVIGGMFAGQ 860

Query: 378 LKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTG 433
             S +  Q     S T + F  + ++I  +   ++ + L+ + APE L G   +R     
Sbjct: 861 HASQLTCQTCGVTSTTYEAFWSISVEIPRQGQCSLRECLQSYCAPERLAGDELWRCPRCK 920

Query: 434 NAGVVTAKKSVKIQTLSKILILHLMRFSYG-SQGSTKLHKSVRFPLQ 479
                 A K + I      L++H  RFS   ++ + K+ + V FPLQ
Sbjct: 921 KDR--EAVKKITITRAPDTLVIHFKRFSASRTESARKVRRPVDFPLQ 965


>gi|238487642|ref|XP_002375059.1| ubiquitin C-terminal hydrolase, putative [Aspergillus flavus
           NRRL3357]
 gi|220699938|gb|EED56277.1| ubiquitin C-terminal hydrolase, putative [Aspergillus flavus
           NRRL3357]
          Length = 827

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 134/316 (42%), Gaps = 36/316 (11%)

Query: 188 AINEPVKSVKDLLPR-GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYP-T 245
           A+  P    +  LPR GL N G  C++N+T+Q L +     +   + R R   +  +  +
Sbjct: 444 ALYTPSSIYRAKLPRTGLANFGVTCYMNSTIQCLNATMMLSRFFVDNRFRYYVQKNWKGS 503

Query: 246 LTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 305
                G  ++       S  K ++ V+       P+ F    +NF   + N      RQ+
Sbjct: 504 QGVMPGLFANLIR----SLWKGDVEVI------VPTSF----RNFCGRL-NQEWAIDRQQ 548

Query: 306 DAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWE----TVGPKNKSAVTR 361
           DA+EF  F +D +H++L        +IN   + L  L  E+E +     V   +K    R
Sbjct: 549 DAKEFFDFTVDCLHEDL--------NINWQRSPLRPLTFEEEMQRERMPVAKVSKIEWDR 600

Query: 362 TQSFLPSALSDIFGGQLKSVVKAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 420
                 S +S +F GQ  S ++    K  S T + F  + ++I S     I   LR +  
Sbjct: 601 YCHREESFISSLFAGQHASRLRCTTCKRTSTTYEAFYSISVEIPSSGTGDIYQCLRSYCK 660

Query: 421 PENLEG---YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG-SQGSTKLHKSVRF 476
            E L G   ++        V T  K + I    +IL++H  RFS   +Q + K+H  + F
Sbjct: 661 EEMLSGDEVWKCPYCKCERVAT--KQIIITRAPQILVIHFKRFSASKTQTARKIHTPIEF 718

Query: 477 PLQLVLGRDLLVTPSA 492
           PL  +   D + +P +
Sbjct: 719 PLHGLRMDDFVYSPPS 734


>gi|350631244|gb|EHA19615.1| hypothetical protein ASPNIDRAFT_179052 [Aspergillus niger ATCC
           1015]
          Length = 374

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 124/291 (42%), Gaps = 36/291 (12%)

Query: 200 LPR-GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFV-GFVSDFD 257
           LPR GL N G  C++N+TLQ L +     +   + R R   +  +      + G  ++  
Sbjct: 7   LPRTGLTNFGVTCYMNSTLQCLNATVVLSKFFIDNRFRYYVQKNWKGSQGVMPGLFANLI 66

Query: 258 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 317
                S  K ++ V+       P+ F    +NF   + N      RQ+DA+EF  F++D 
Sbjct: 67  R----SLWKNDVEVI------MPTSF----RNFCGRL-NQEWAIDRQQDAKEFFDFVVDC 111

Query: 318 MHDELLKLQGESTSINGANTALVSLAEEDEWET----VGPKNKSAVTRTQSFLPSALSDI 373
           +H++L        +IN   T L  L  E+E +     V   +K    R      S +S +
Sbjct: 112 LHEDL--------NINWQRTPLRPLTFEEEMQRERMPVPKVSKIEWDRYCHREESFISSL 163

Query: 374 FGGQLKSVVKAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRT 429
           F GQ  S ++    K  S T + F  + ++I       I   LR +   E L G   ++ 
Sbjct: 164 FAGQHASRLRCTTCKRTSTTYEAFYSISVEIPPSGTGDIYQCLRSYCQEEMLSGDEVWKC 223

Query: 430 SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG-SQGSTKLHKSVRFPLQ 479
                  V T  K + I    +IL++H  RFS   +Q + K+H  + FPL 
Sbjct: 224 PYCKCERVAT--KQIIITRAPQILVVHFKRFSASKTQSARKIHTPIDFPLH 272


>gi|345315473|ref|XP_001514295.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like, partial
           [Ornithorhynchus anatinus]
          Length = 282

 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 92/205 (44%), Gaps = 19/205 (9%)

Query: 279 SPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTA 338
           SPS F+  ++ + P           Q+DAQEFL F++D +H E+ ++     S +  N  
Sbjct: 40  SPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGLHSEVNRIMVRPKS-HAEN-- 91

Query: 339 LVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFL 397
           L  L +E+       K +    +      S + D+F GQ+KS +   +    S    PF 
Sbjct: 92  LDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQMKSSLTCTECGYCSTVFDPFW 144

Query: 398 LLHLDIYSEAVH--TIEDALRLFSAPENLEG-YRTSSTGNAGVVTAKKSVKIQTLSKILI 454
            L L I        T+ D LRLF+  + L+G  + +           K   IQ   KIL+
Sbjct: 145 DLSLPITKRGFPEVTLMDCLRLFTKEDVLDGDEKPTCCRCRARKRCIKKFSIQKFPKILV 204

Query: 455 LHLMRFSYGSQGSTKLHKSVRFPLQ 479
           LHL RFS     ++KL   V FPL+
Sbjct: 205 LHLKRFSESRIRTSKLTTFVNFPLK 229


>gi|11120037|gb|AAG30819.1| UBP3 [Saccharomyces carlsbergensis]
          Length = 426

 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 20/145 (13%)

Query: 199 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPTLTAFVGFVS 254
           ++PRG+IN  N+CF+++ LQ L+ C PF+ +L  L TR+    I  +    L A +    
Sbjct: 243 IIPRGIINRANICFMSSVLQVLLYCQPFIDVLNVLSTRNTNSRIGTSSCRLLDACLTMYK 302

Query: 255 DFDTPSGGSS-----KKKNISVLDIGRPFSPSMFE--AVLKNFTPD----VPNSISGRP- 302
            FD  +   S     + +  +  D  +P     F+  A  +   PD      ++IS    
Sbjct: 303 QFDMETYEKSLESANENEKSTETDSKKPIKSKNFQHNATAEAVKPDDFYKTLSTISKFKD 362

Query: 303 ----RQEDAQEFLSFIMDQMHDELL 323
                QEDA+EFL+ ++DQ+H+EL+
Sbjct: 363 LQWGHQEDAEEFLTHLLDQLHEELI 387


>gi|297742872|emb|CBI35637.3| unnamed protein product [Vitis vinifera]
          Length = 331

 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 118/281 (41%), Gaps = 35/281 (12%)

Query: 194 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQELRT--RDIPKAGYPTL 246
           K++ D  P G     L N GN C+ N+ LQAL  C PF + L E  T  +++  A    L
Sbjct: 10  KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYTNNKNLADAEENLL 69

Query: 247 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 306
           T               SS+KK   V+      +P  F   LK       N +      +D
Sbjct: 70  TCLADLFMQI------SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQD 112

Query: 307 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 366
           A EFL+F+++++ D L K    S S    ++     A        GPK   A    +  L
Sbjct: 113 AHEFLNFLLNELVDILEKEASASKSDPETSSPPEKTAN-------GPKTAQANGVQKEPL 165

Query: 367 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 425
            + +   F G L +  +  +    +A  + FL L LDI  E   +I   L+ FS+ E L 
Sbjct: 166 VTWVHKNFQGILTNETRCLRCETVTARDETFLDLSLDI--EQNSSITSCLKNFSSTETLN 223

Query: 426 GY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ 465
              +        +  A+K +KI+    IL++HL RF Y  Q
Sbjct: 224 AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQ 264


>gi|301104609|ref|XP_002901389.1| ubiquitin-specific protease, putative [Phytophthora infestans
           T30-4]
 gi|262100864|gb|EEY58916.1| ubiquitin-specific protease, putative [Phytophthora infestans
           T30-4]
          Length = 563

 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 123/316 (38%), Gaps = 65/316 (20%)

Query: 201 PRGLI---NSGNLCFLNATLQALMSCSPFVQLLQE-LRTRDIPKAGYPTLTAFVGFVSDF 256
           PRGL+   N GN CF+N+ LQ + +    V+     L  R+I     PT  A      D 
Sbjct: 191 PRGLVGLQNLGNTCFMNSCLQCVSNLPALVKYFHPGLYAREINDTS-PTKGALATAFGDL 249

Query: 257 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 316
                       I  L  G  F+ +     LK     + +  +G   Q+DAQEFL F++D
Sbjct: 250 ------------IKALRTGDKFTATR-PVELKRVIGKIASRYTGYD-QQDAQEFLRFLLD 295

Query: 317 QMHDELLKLQGEST--SINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
            +H++L +++ +     I     A      ++ W+    +N            S LS++F
Sbjct: 296 GLHEDLNRVRRKPAYYEIKDRPEAKDRDVSDEYWKFYLERNA-----------STLSELF 344

Query: 375 GGQLKSVVKAQ-GNKASATVQPFLLLHLDI---------------------------YSE 406
            GQL+S ++ +  N  S     F  L L +                            + 
Sbjct: 345 CGQLRSEIRCETCNHRSLCFDVFWDLSLPVPKKIGKNSTMRISSGFFSGGRTASASGDTA 404

Query: 407 AVHTIEDALRLFSAPENL---EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG 463
           +  +I D L+ ++  E L     Y          V   K + +  L  +L+LHL RFSY 
Sbjct: 405 SAMSIHDCLKAYTEQEFLGDDAAYYCQKCKTHRSVA--KKISVYRLPNVLVLHLKRFSYS 462

Query: 464 SQGSTKLHKSVRFPLQ 479
           +    K+  S+ FP Q
Sbjct: 463 TFSRDKVSTSISFPAQ 478


>gi|340503036|gb|EGR29667.1| ubiquitin carboxyl-terminal hydrolase family protein, putative
           [Ichthyophthirius multifiliis]
          Length = 381

 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 122/291 (41%), Gaps = 48/291 (16%)

Query: 203 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 261
           GL N GN C++N+ LQ L +CS  ++  LQ++  ++  +        F   +    T + 
Sbjct: 27  GLQNIGNTCYINSALQCLFNCSQLLEYFLQKIDEKEKNQKNKGVSDEFAKLIRKMATNNK 86

Query: 262 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 321
            +             P  PS     LK+    +     G   QED QEFL  +++ ++D+
Sbjct: 87  LT-------------PEYPSE----LKSSIEKICTKFKGN-NQEDCQEFLRTLLENLNDD 128

Query: 322 LLKLQG-------ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 374
           L ++ G       E+   N  +   +S    D W     +  +++          ++DIF
Sbjct: 129 LNRVIGKKPYKELEADPKNQQDLQKIS----DIWFQYYKERDNSI----------ITDIF 174

Query: 375 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEA----VHTIEDALRLFSAPENLE-GYR 428
            GQL S+V   +  K S     F+ L L   +      V+ +E  +  F   E L+  Y 
Sbjct: 175 TGQLLSIVSCLKCEKQSYAFDNFMDLSLSFTNNHRFNFVYELERLIEQFLKEEPLDNAYY 234

Query: 429 TSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
                N     +K+  +IQ L  +L++H+ RF +GS    KL   + F +Q
Sbjct: 235 CQKCKNH--TKSKRRFEIQKLPDVLVIHIKRFYFGSIRKEKLLHKITFNIQ 283


>gi|145491367|ref|XP_001431683.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124398788|emb|CAK64285.1| unnamed protein product [Paramecium tetraurelia]
          Length = 451

 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 143/340 (42%), Gaps = 54/340 (15%)

Query: 162 GNIDGRDQNAAACNSSISGSKEVPMKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALM 221
             +D   Q       SI  S ++  K   +  ++VK L+  GL N GN C++NA++Q L 
Sbjct: 47  NQLDSDKQEIIPSYQSIPTSYQLKGKKKFQKKEAVKGLV--GLKNLGNKCYMNASIQLLS 104

Query: 222 SCSPF-------VQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDI 274
           +  P         QL +  R   I   G  T+ AF   +         S  + +I  L +
Sbjct: 105 NLQPLSDYFIEDFQLTEINRKNPISTQGLATV-AFANLIK--------SLWQMDIQKLTV 155

Query: 275 -GRPFS-PSMFEAVL----KNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGE 328
            G P   P  F  ++    K+F+ +          Q+DAQEFL +++D +H++L ++   
Sbjct: 156 KGTPIIIPEEFNKIIGYCNKSFSDNT---------QQDAQEFLMYLLDMIHEDLNRVTFP 206

Query: 329 STSIN------GANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 382
             S+         N   +     + W     ++KS +            D+  GQ K+ +
Sbjct: 207 IKSVQLREYSGDCNQRELEKQAAETWGDYLQRSKSIIV-----------DLMQGQFKNSL 255

Query: 383 KA-QGNKASATVQPFLLLHLDI-YSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVT 439
           K    +  +   +P + L + I  SE    IE  ++ +   E L  G +        +V 
Sbjct: 256 KCLSCDNYTYKFEPLMYLSVPIPESEECQLIE-CIKEYVKEEQLTNGNQWFCENCHKLVD 314

Query: 440 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 479
           A K + +  L  ILI+HL RF +   G  K+ +++ FP++
Sbjct: 315 AIKKIDLWKLPTILIIHLKRFKFIENGIKKIEQAINFPME 354


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.313    0.130    0.368 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,678,467,486
Number of Sequences: 23463169
Number of extensions: 322829489
Number of successful extensions: 725186
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 3616
Number of HSP's that attempted gapping in prelim test: 718157
Number of HSP's gapped (non-prelim): 7743
length of query: 500
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 353
effective length of database: 8,910,109,524
effective search space: 3145268661972
effective search space used: 3145268661972
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 79 (35.0 bits)