Your job contains 1 sequence.
>010816
MEIETETTNNVMCLLTDPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYISD
HELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDG
RQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQ
TGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHT
LAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF
DHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQ
QLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPS
NFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWS
PDGEKVASGGKDRVLKLWMG
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 010816
(500 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2176897 - symbol:AT5G52820 "AT5G52820" species... 1816 2.7e-187 1
UNIPROTKB|Q9NVX2 - symbol:NLE1 "Notchless protein homolog... 1261 5.5e-156 2
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 1256 2.4e-155 2
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 1255 2.4e-155 2
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 1254 3.9e-155 2
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 1247 2.1e-154 2
UNIPROTKB|F1NII4 - symbol:NLE1 "Uncharacterized protein" ... 1223 5.1e-151 2
DICTYBASE|DDB_G0295761 - symbol:nle1 "putative notchless"... 1220 1.7e-150 2
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 1208 2.8e-150 2
FB|FBgn0021874 - symbol:Nle "Notchless" species:7227 "Dro... 1132 8.2e-115 1
UNIPROTKB|G4NFU5 - symbol:MGG_08708 "WD repeat-containing... 881 3.8e-112 2
WB|WBGene00021074 - symbol:W07E6.2 species:6239 "Caenorha... 1053 1.9e-106 1
SGD|S000000668 - symbol:RSA4 "WD-repeat protein involved ... 1044 1.7e-105 1
ASPGD|ASPL0000055088 - symbol:AN10058 species:162425 "Eme... 922 1.5e-92 1
POMBASE|SPCC18.05c - symbol:SPCC18.05c "notchless-like pr... 917 5.0e-92 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 526 2.6e-49 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 364 2.0e-33 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 374 7.1e-33 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 356 1.4e-32 1
ASPGD|ASPL0000046644 - symbol:AN2021 species:162425 "Emer... 369 1.4e-32 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 337 1.9e-30 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 332 7.1e-30 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 329 1.6e-29 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 325 4.7e-29 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 325 4.7e-29 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 325 4.7e-29 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 325 4.7e-29 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 325 4.7e-29 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 325 4.7e-29 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 284 1.2e-28 2
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 321 1.4e-28 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 305 9.1e-27 1
DICTYBASE|DDB_G0293070 - symbol:DDB_G0293070 "TROVE domai... 327 1.9e-25 2
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 292 2.6e-25 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 300 2.7e-25 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 288 7.3e-25 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 288 7.3e-25 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 288 7.3e-25 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 306 1.1e-24 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 294 1.3e-24 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 285 1.6e-24 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 285 1.6e-24 1
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 284 2.0e-24 1
TAIR|locus:2008159 - symbol:RACK1B_AT "AT1G48630" species... 239 4.2e-24 2
UNIPROTKB|G4MNI3 - symbol:MGG_05616 "Pre-mRNA-splicing fa... 299 4.5e-24 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 280 5.7e-24 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 290 9.2e-24 1
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 277 1.2e-23 1
ASPGD|ASPL0000041012 - symbol:AN9085 species:162425 "Emer... 277 1.2e-23 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 288 1.8e-23 1
UNIPROTKB|E1BVN5 - symbol:PLRG1 "Uncharacterized protein"... 288 5.8e-23 2
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 283 6.1e-23 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 282 7.5e-23 1
ASPGD|ASPL0000058626 - symbol:AN1208 species:162425 "Emer... 274 1.1e-22 2
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 267 1.6e-22 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 267 1.6e-22 1
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 267 1.6e-22 1
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 267 1.6e-22 1
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 266 2.0e-22 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 280 2.0e-22 1
UNIPROTKB|Q3SZK1 - symbol:AAMP "Angio-associated migrator... 241 2.2e-22 2
RGD|1306281 - symbol:Aamp "angio-associated, migratory ce... 240 2.3e-22 2
POMBASE|SPBP22H7.07 - symbol:prp5 "WD repeat protein Prp5... 283 2.3e-22 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 283 2.5e-22 1
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 265 2.6e-22 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 278 2.7e-22 1
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 245 3.1e-22 2
FB|FBgn0041171 - symbol:ago "archipelago" species:7227 "D... 291 3.2e-22 1
UNIPROTKB|Q2KID6 - symbol:PLRG1 "Pleiotropic regulator 1"... 284 3.6e-22 2
MGI|MGI:1858197 - symbol:Plrg1 "pleiotropic regulator 1, ... 284 3.6e-22 2
UNIPROTKB|O43660 - symbol:PLRG1 "Pleiotropic regulator 1"... 284 3.7e-22 2
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 286 3.7e-22 1
UNIPROTKB|E2QYT6 - symbol:PLRG1 "Uncharacterized protein"... 284 3.8e-22 2
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 277 4.7e-22 1
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 238 6.6e-22 2
RGD|621047 - symbol:Plrg1 "pleiotropic regulator 1" speci... 281 8.6e-22 2
UNIPROTKB|Q5RCG7 - symbol:AAMP "Angio-associated migrator... 235 1.2e-21 2
UNIPROTKB|Q13685 - symbol:AAMP "Angio-associated migrator... 235 1.2e-21 2
FB|FBgn0036354 - symbol:Poc1 "Proteome of centrioles 1" s... 271 1.3e-21 1
CGD|CAL0000293 - symbol:UTP13 species:5476 "Candida albic... 180 1.4e-21 2
UNIPROTKB|Q5AGB1 - symbol:CaO19.11744 "Putative uncharact... 180 1.4e-21 2
RGD|2321145 - symbol:Fbxw7 "F-box and WD repeat domain co... 279 1.5e-21 1
UNIPROTKB|Q7YR70 - symbol:AAMP "Angio-associated migrator... 232 2.7e-21 2
FB|FBgn0020618 - symbol:Rack1 "Receptor of activated prot... 223 3.0e-21 2
MGI|MGI:1354695 - symbol:Fbxw7 "F-box and WD-40 domain pr... 277 3.1e-21 1
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 276 3.3e-21 1
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 276 3.9e-21 1
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 254 4.2e-21 1
SGD|S000000402 - symbol:TAF5 "Subunit (90 kDa) of TFIID a... 277 5.1e-21 1
UNIPROTKB|Q969H0 - symbol:FBXW7 "F-box/WD repeat-containi... 276 5.2e-21 1
UNIPROTKB|E2QUZ3 - symbol:FBXW7 "Uncharacterized protein"... 276 5.3e-21 1
POMBASE|SPAC18B11.10 - symbol:tup11 "transcriptional core... 271 5.8e-21 2
ZFIN|ZDB-GENE-090313-79 - symbol:fbxw7 "F-box and WD repe... 276 6.0e-21 1
ZFIN|ZDB-GENE-040426-2787 - symbol:plrg1 "pleiotropic reg... 272 6.5e-21 1
DICTYBASE|DDB_G0275045 - symbol:gpbB "Guanine nucleotide-... 251 8.9e-21 1
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 272 9.2e-21 1
ZFIN|ZDB-GENE-990415-89 - symbol:gnb2l1 "guanine nucleoti... 224 9.6e-21 2
ASPGD|ASPL0000005389 - symbol:sconB species:162425 "Emeri... 273 1.0e-20 1
UNIPROTKB|P63247 - symbol:GNB2L1 "Guanine nucleotide-bind... 225 1.0e-20 2
UNIPROTKB|P63243 - symbol:GNB2L1 "Guanine nucleotide-bind... 225 1.0e-20 2
WARNING: Descriptions of 1607 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 1816 (644.3 bits), Expect = 2.7e-187, P = 2.7e-187
Identities = 333/469 (71%), Positives = 389/469 (82%)
Query: 3 IETETTNNVMCLLTDPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYISDHE 62
++T+ VMCLLTDPEG LG+ MY PQ AGP QL+Q+VN+ L+NEE LPY+FY+SD E
Sbjct: 4 MDTDEGKTVMCLLTDPEGTHLGSAMYIPQKAGPLQLTQLVNRFLDNEEMLPYSFYVSDEE 63
Query: 63 LLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQ 122
LLVP+G+YLEK+KVSVEKVL+IVYQ QAVFRIRPVNRCS TIAGH EAVL V+FSPDG+Q
Sbjct: 64 LLVPVGTYLEKNKVSVEKVLTIVYQQQAVFRIRPVNRCSQTIAGHAEAVLCVSFSPDGKQ 123
Query: 123 LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTG 182
LASGSGDTTVRLWDL T+TP+F C GHKNWVL +AWS DGKHLVSGSK+GE+ CW+P+ G
Sbjct: 124 LASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKG 183
Query: 183 KPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLA 242
+ G+PL+GHKKWITGISWEPVHL++PCRRFV++SKDGDARIWD++L+K +ICLSGHTLA
Sbjct: 184 ELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLA 243
Query: 243 VTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDH 302
VTCVKWGGDG+IYTGSQDCTIK+WETTQGKLIRELKGHGHW+NSLALSTEY LRTGAFDH
Sbjct: 244 VTCVKWGGDGIIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTEYVLRTGAFDH 303
Query: 303 TGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
TG+QY P E K+ ALERYNK KG++PERLVSGSDDFTMFLWEP+VSKQPK R+TGHQQL
Sbjct: 304 TGRQYP-PNEEKQKALERYNKTKGDSPERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQL 362
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE----LIYCFRY 418
VNHVYFSPDG+W+ASASFDKS++LWNG TG+FV VFRGHVGPVYQ+ + L+
Sbjct: 363 VNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSK 422
Query: 419 PSNF--YCVVDMSCCMSL---------YSWSADSRLLLSGSKDSTLKVW 456
S + + L WS D ++SG KD LK+W
Sbjct: 423 DSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 326 (119.8 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 60/65 (92%), Positives = 63/65 (96%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
SWSADSRLLLSGSKDSTLK+W+IRT+KLKQDLPGHADEVFAVDWSPDGEKV SGGKDRVL
Sbjct: 409 SWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVL 468
Query: 496 KLWMG 500
KLW G
Sbjct: 469 KLWKG 473
Score = 160 (61.4 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 54/183 (29%), Positives = 84/183 (45%)
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGT 390
R V+ S D +W+ + K ++GH V V + DG + + S D +IK+W T
Sbjct: 213 RFVTSSKDGDARIWDITLKKSIIC-LSGHTLAVTCVKWGGDGI-IYTGSQDCTIKMWETT 270
Query: 391 TGKFVAVFRGHVGPVYQIRFELIYCFR----------YPSNFYCVVDMSCCMSLYSWS-A 439
GK + +GH + + Y R YP N + + Y+ +
Sbjct: 271 QGKLIRELKGHGHWINSLALSTEYVLRTGAFDHTGRQYPPN----EEKQKALERYNKTKG 326
Query: 440 DS-RLLLSGSKDSTLKVWDIRTQKL-KQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKL 497
DS L+SGS D T+ +W+ K K+ L GH V V +SPDG+ +AS D+ ++L
Sbjct: 327 DSPERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRL 386
Query: 498 WMG 500
W G
Sbjct: 387 WNG 389
Score = 140 (54.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 42/143 (29%), Positives = 72/143 (50%)
Query: 254 IYTGSQDCTIKVWETTQGKLIRE-LKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPE 311
+ +GS D T+ +WE + K ++ L GH VN + S + + + +FD + + ++
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGIT 391
Query: 312 EMKKAALERY----NKIKGNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHV 366
+ ++ +A RL+ SGS D T+ +WE +K+ K + GH V V
Sbjct: 392 GQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIR-TKKLKQDLPGHADEVFAV 450
Query: 367 YFSPDGQWVASASFDKSIKLWNG 389
+SPDG+ V S D+ +KLW G
Sbjct: 451 DWSPDGEKVVSGGKDRVLKLWKG 473
Score = 129 (50.5 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
S+S D + L SGS D+T+++WD+ T+ GH + V V WSPDG+ + SG K +
Sbjct: 116 SFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEI 175
Query: 496 KLW 498
W
Sbjct: 176 CCW 178
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 1261 (449.0 bits), Expect = 5.5e-156, Sum P(2) = 5.5e-156
Identities = 230/398 (57%), Positives = 288/398 (72%)
Query: 17 DPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKV 76
D G LG+P P + P +L + N LL E+ LP AF++ D E++ LG LE V
Sbjct: 23 DEGGQLLGSPFDVPVDITPDRLQLVCNALLAQEDPLPLAFFVHDAEIVSSLGKTLESQAV 82
Query: 77 SVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
EKVL I+YQPQA+FR+R V RC++++ GH+EAV+SVAFSP G+ LASGSGDTTVR WD
Sbjct: 83 ETEKVLDIIYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWD 142
Query: 137 LNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWI 196
L+T+TP F C GH++WVL I+WS DG+ L SG K G++ WDP TGK G L+GH KWI
Sbjct: 143 LSTETPHFTCKGHRHWVLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWI 202
Query: 197 TGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYT 256
TG+SWEP+H N CR S+SKDG RIWD + +C L+GHT +VTC++WGGDG++Y+
Sbjct: 203 TGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWGGDGLLYS 262
Query: 257 GSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS------SP 310
SQD TIKVW G L R L+GHGHWVN++ALST+YALRTGAF+ + S
Sbjct: 263 ASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNPQDLQGSL 322
Query: 311 EEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSP 370
+E+K+ AL RYN ++G PERLVSGSDDFT+FLW PA K+P TRMTGHQ L+N V FSP
Sbjct: 323 QELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSP 382
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
D + VASASFDKSIKLW+G TGK++A RGHV VYQI
Sbjct: 383 DSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI 420
Score = 281 (104.0 bits), Expect = 5.5e-156, Sum P(2) = 5.5e-156
Identities = 48/63 (76%), Positives = 58/63 (92%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
+WSADSRLL+SGS DSTLKVWD++ QKL DLPGHADEV+AVDWSPDG++VASGGKD+ L
Sbjct: 421 AWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCL 480
Query: 496 KLW 498
++W
Sbjct: 481 RIW 483
Score = 256 (95.2 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 91/324 (28%), Positives = 147/324 (45%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC-TGHKNWVLCIAW--- 158
T GH VLS+++SPDGR+LASG + + LWD +T + + GH W+ ++W
Sbjct: 151 TCKGHRHWVLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPL 210
Query: 159 --SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
+ + +++ S SK G ++ WD G+ L+GH + +T + W L SA
Sbjct: 211 HANPECRYVASSSKDGSVRIWDTTAGRCE-RILTGHTQSVTCLRWGGDGL------LYSA 263
Query: 217 SKDGDARIWDVSLRKCVIC--LSGHTLAVTCVKWGGDGVIYTGS-QDCTIKVW-ETTQGK 272
S+D ++W V+C L GH V + D + TG+ + V + QG
Sbjct: 264 SQDRTIKVWRA--HDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNPQDLQGS 321
Query: 273 LIRELKGHG-HWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALER------YNKIK 325
L +ELK N + L +G+ D T +S P E KK N++
Sbjct: 322 L-QELKERALSRYNLVRGQGPERLVSGSDDFTLFLWS-PAEDKKPLTRMTGHQALINQVL 379
Query: 326 GNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+ R+V S S D ++ LW+ K + + GH V + +S D + + S S D ++
Sbjct: 380 FSPDSRIVASASFDKSIKLWDGRTGKYLAS-LRGHVAAVYQIAWSADSRLLVSGSSDSTL 438
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQI 408
K+W+ K GH VY +
Sbjct: 439 KVWDVKAQKLAMDLPGHADEVYAV 462
Score = 246 (91.7 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 82/298 (27%), Positives = 134/298 (44%)
Query: 103 TIAGHTEAVLSVAF-----SPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
T+AGH++ + +++ +P+ R +AS S D +VR+WD TGH V C+
Sbjct: 194 TLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLR 253
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
W DG L S S+ ++ W G L GH W+ ++ L+ A
Sbjct: 254 WGGDGL-LYSASQDRTIKVWRAHDGVLC-RTLQGHGHWVNTMA-----LSTDYALRTGAF 306
Query: 218 KDGDARIWDVSLRKCVICLSGHTLA-VTCVKWGGDGVIYTGSQDCTIKVWETTQGKL-IR 275
+ +A + L+ + L L+ V+ G + +GS D T+ +W + K +
Sbjct: 307 EPAEASVNPQDLQGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLT 366
Query: 276 ELKGHGHWVNSLALSTEYALRTGA-FDHTGKQYSSPEEMKKAALERY----NKIKGNAPE 330
+ GH +N + S + + A FD + K + A+L + +I +A
Sbjct: 367 RMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADS 426
Query: 331 RL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
RL VSGS D T+ +W+ K + GH V V +SPDGQ VAS DK +++W
Sbjct: 427 RLLVSGSSDSTLKVWDVKAQKLAMD-LPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 160 (61.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
A++ GH AV +A+S D R L SGS D+T+++WD+ Q GH + V + WS D
Sbjct: 408 ASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPD 467
Query: 162 GKHLVSGSKAGELQCW 177
G+ + SG K L+ W
Sbjct: 468 GQRVASGGKDKCLRIW 483
Score = 138 (53.6 bits), Expect = 7.1e-141, Sum P(2) = 7.1e-141
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+S DSR++ S S D ++K+WD RT K L GH V+ + WS D + SG D LK
Sbjct: 380 FSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLK 439
Query: 497 LW 498
+W
Sbjct: 440 VW 441
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 56/190 (29%), Positives = 84/190 (44%)
Query: 329 PE-RLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
PE R V S S D ++ +W+ + + +TGH Q V + + DG + SAS D++IK+
Sbjct: 214 PECRYVASSSKDGSVRIWDTTAGRCERI-LTGHTQSVTCLRWGGDGL-LYSASQDRTIKV 271
Query: 387 WNGTTGKFVAVFRGH---VGPV-----YQIR---FELIYCFRYPSNFYCVVD--MSCCMS 433
W G +GH V + Y +R FE P + + +S
Sbjct: 272 WRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNPQDLQGSLQELKERALS 331
Query: 434 LYSW--SADSRLLLSGSKDSTLKVWD-IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 490
Y+ L+SGS D TL +W +K + GH + V +SPD VAS
Sbjct: 332 RYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASAS 391
Query: 491 KDRVLKLWMG 500
D+ +KLW G
Sbjct: 392 FDKSIKLWDG 401
Score = 133 (51.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
++S + L SGS D+T++ WD+ T+ GH V ++ WSPDG K+ASG K+ +
Sbjct: 121 AFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGRKLASGCKNGQI 180
Query: 496 KLW 498
LW
Sbjct: 181 LLW 183
Score = 128 (50.1 bits), Expect = 2.1e-31, Sum P(2) = 2.1e-31
Identities = 39/145 (26%), Positives = 74/145 (51%)
Query: 277 LKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALE--RYNKIKGN-APE-- 330
L+GH V S+A S T L +G+ D T + + E + R+ + + +P+
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGR 169
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHV-----YFSPDGQWVASASFDKSIK 385
+L SG + + LW+P+ KQ + GH + + + + +P+ ++VAS+S D S++
Sbjct: 170 KLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVR 229
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRF 410
+W+ T G+ + GH V +R+
Sbjct: 230 IWDTTAGRCERILTGHTQSVTCLRW 254
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 1256 (447.2 bits), Expect = 2.4e-155, Sum P(2) = 2.4e-155
Identities = 233/418 (55%), Positives = 295/418 (70%)
Query: 1 MEIETETT-NNVMCLLT---DPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAF 56
+E+ E ++V LL D G LG+P P + P QL + N LL +E LP AF
Sbjct: 5 VEVSDEAAASDVQRLLVQFQDEGGQLLGSPFDVPVDITPDQLQLVCNALLAQDEPLPLAF 64
Query: 57 YISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAF 116
Y+ D E++ LG LE V EK++ I+YQPQAVFR+R V RC++++ GH+EAV+SVAF
Sbjct: 65 YVHDAEIVSSLGKTLESQSVETEKIVDIIYQPQAVFRVRAVTRCTSSLEGHSEAVISVAF 124
Query: 117 SPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQC 176
SP G+ LASGSGDTTVR WDL+T+TP F C GH++WVL I+WS DGK L SG K G++
Sbjct: 125 SPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQILL 184
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
WDP TG G L+GH KWITG+SWEP+H+N CR S+SKDG R+WD + +C L
Sbjct: 185 WDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERIL 244
Query: 237 SGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR 296
+GHT +VTC++WGGDG++Y+ SQD TIKVW G L R L+GHGHWVN++ALST+YALR
Sbjct: 245 TGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALR 304
Query: 297 TGAFD------HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSK 350
TGAF+ + S +E+K+ A RYN ++G PERLVSGSDDFT+FLW PA K
Sbjct: 305 TGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDK 364
Query: 351 QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
+P RMTGHQ L+N V FSPD + VASASFDKSIKLW+G TGK++A RGHV VYQI
Sbjct: 365 KPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI 422
Score = 280 (103.6 bits), Expect = 2.4e-155, Sum P(2) = 2.4e-155
Identities = 48/63 (76%), Positives = 58/63 (92%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
+WSADSRLL+SGS DSTLKVWD++ QKL DLPGHADEV+AVDWSPDG++VASGGKD+ L
Sbjct: 423 AWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVASGGKDKCL 482
Query: 496 KLW 498
++W
Sbjct: 483 RIW 485
Score = 275 (101.9 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 91/324 (28%), Positives = 150/324 (46%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC-TGHKNWVLCIAW--- 158
T GH VLS+++SPDG++LASG + + LWD +T T + + TGH W+ ++W
Sbjct: 153 TCKGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPL 212
Query: 159 --SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
+ + +++ S SK G ++ WD G+ L+GH + +T + W L SA
Sbjct: 213 HMNPECRYVASSSKDGSVRVWDTTAGRCE-RILTGHTQSVTCLRWGGDGL------LYSA 265
Query: 217 SKDGDARIWDVSLRKCVIC--LSGHTLAVTCVKWGGDGVIYTGS---QDCTIKVWETTQG 271
S+D ++W V+C L GH V + D + TG+ + T+ + QG
Sbjct: 266 SQDRTIKVWRA--HDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNA-QDLQG 322
Query: 272 KLIRELKGHGHWVNSLALST-EYALRTGAFDHTGKQYSSPEEMKKAALER-----YNKIK 325
L +ELK +L L +G+ D T +S E+ K A N++
Sbjct: 323 SL-KELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVL 381
Query: 326 GNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+ R+V S S D ++ LW+ K + + GH V + +S D + + S S D ++
Sbjct: 382 FSPDSRIVASASFDKSIKLWDGRTGKYLAS-LRGHVAAVYQIAWSADSRLLVSGSSDSTL 440
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQI 408
K+W+ K GH VY +
Sbjct: 441 KVWDVKAQKLTTDLPGHADEVYAV 464
Score = 241 (89.9 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 82/297 (27%), Positives = 132/297 (44%)
Query: 103 TIAGHTEAVLSVAF-----SPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
T+ GH++ + +++ +P+ R +AS S D +VR+WD TGH V C+
Sbjct: 196 TLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLR 255
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
W DG L S S+ ++ W G L GH W+ ++ + F A
Sbjct: 256 WGGDGL-LYSASQDRTIKVWRAHDGVLC-RTLQGHGHWVNTMALSTDYA-LRTGAFEPAE 312
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKL-IRE 276
+A+ SL++ S V+ G + +GS D T+ +W + K +
Sbjct: 313 ATVNAQDLQGSLKELKERASSR---YNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLAR 369
Query: 277 LKGHGHWVNSLALSTEYALRTGA-FDHTGKQYSSPEEMKKAALERY----NKIKGNAPER 331
+ GH +N + S + + A FD + K + A+L + +I +A R
Sbjct: 370 MTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR 429
Query: 332 L-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
L VSGS D T+ +W+ K T + GH V V +SPDGQ VAS DK +++W
Sbjct: 430 LLVSGSSDSTLKVWDVKAQKLT-TDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 485
Score = 194 (73.4 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 47/124 (37%), Positives = 62/124 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
A + GH + V FSPD R +AS S D +++LWD T + GH V IAWSAD
Sbjct: 368 ARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSAD 427
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ LVSGS L+ WD + K + + L GH + + W P +R S KD
Sbjct: 428 SRLLVSGSSDSTLKVWDVKAQKLTTD-LPGHADEVYAVDWSP-----DGQRVASGGKDKC 481
Query: 222 ARIW 225
RIW
Sbjct: 482 LRIW 485
Score = 138 (53.6 bits), Expect = 2.4e-140, Sum P(2) = 2.4e-140
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+S DSR++ S S D ++K+WD RT K L GH V+ + WS D + SG D LK
Sbjct: 382 FSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLK 441
Query: 497 LW 498
+W
Sbjct: 442 VW 443
Score = 137 (53.3 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 56/190 (29%), Positives = 82/190 (43%)
Query: 329 PE-RLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
PE R V S S D ++ +W+ + + +TGH Q V + + DG + SAS D++IK+
Sbjct: 216 PECRYVASSSKDGSVRVWDTTAGRCERI-LTGHTQSVTCLRWGGDGL-LYSASQDRTIKV 273
Query: 387 WNGTTGKFVAVFRGHVGPVYQIRFELIYCFRY----PSNFYC-VVDMSCCMSLYSWSADS 441
W G +GH V + Y R P+ D+ + A S
Sbjct: 274 WRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERASS 333
Query: 442 RL----------LLSGSKDSTLKVWD-IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 490
R L+SGS D TL +W +K + GH + V +SPD VAS
Sbjct: 334 RYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASAS 393
Query: 491 KDRVLKLWMG 500
D+ +KLW G
Sbjct: 394 FDKSIKLWDG 403
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
++S + L SGS D+T++ WD+ T+ GH V ++ WSPDG+K+ASG K+ +
Sbjct: 123 AFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQI 182
Query: 496 KLW 498
LW
Sbjct: 183 LLW 185
Score = 128 (50.1 bits), Expect = 2.8e-31, Sum P(2) = 2.8e-31
Identities = 39/145 (26%), Positives = 74/145 (51%)
Query: 277 LKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALE--RYNKIKGN-APE-- 330
L+GH V S+A S T L +G+ D T + + E + R+ + + +P+
Sbjct: 112 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGK 171
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHV-----YFSPDGQWVASASFDKSIK 385
+L SG + + LW+P+ Q +TGH + + + + +P+ ++VAS+S D S++
Sbjct: 172 KLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVR 231
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRF 410
+W+ T G+ + GH V +R+
Sbjct: 232 VWDTTAGRCERILTGHTQSVTCLRW 256
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 1255 (446.8 bits), Expect = 2.4e-155, Sum P(2) = 2.4e-155
Identities = 229/413 (55%), Positives = 289/413 (69%)
Query: 2 EIETETTNNVMCLLTDPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYISDH 61
E T ++ D G LG+P P + P +L + N LL E+ LP AFY+ D
Sbjct: 9 EAATRDVQRLLVQFQDEGGQLLGSPFDVPVDITPDKLQLVCNALLAQEDPLPLAFYVHDA 68
Query: 62 ELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGR 121
E++ LG LE V EKVL I+YQPQA+FR+R V RC++++ GH+EAV+SVAFSP G+
Sbjct: 69 EIVSSLGRTLESQAVETEKVLDIIYQPQAIFRVRAVTRCTSSLEGHSEAVISVAFSPTGK 128
Query: 122 QLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT 181
LASGSGDTTVR WDL+T+TP F C GH++WVL I+WS DGK L SG K G++ WDP T
Sbjct: 129 YLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPST 188
Query: 182 GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTL 241
GK G L+GH KWIT +SWEP+H N CR S+SKDG R+WD + +C L+GH
Sbjct: 189 GKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQ 248
Query: 242 AVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFD 301
+VTC++WGGDG++Y+ SQD TIKVW G L R L+GHGHWVN++ALST+YALRTGAF+
Sbjct: 249 SVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFE 308
Query: 302 HTGKQYS------SPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTR 355
+ S +E+K+ AL RYN ++G PERLVSGSDDFT+FLW PA K+P R
Sbjct: 309 PAEASVNAQDLRGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLAR 368
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
MTGHQ L+N V FSPD + +ASASFDKSIKLW+G TGK++A RGHV VYQI
Sbjct: 369 MTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI 421
Score = 281 (104.0 bits), Expect = 2.4e-155, Sum P(2) = 2.4e-155
Identities = 48/63 (76%), Positives = 58/63 (92%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
+WSADSRLL+SGS DSTLKVWD++ QKL DLPGHADEV+AVDWSPDG++VASGGKD+ L
Sbjct: 422 AWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCL 481
Query: 496 KLW 498
++W
Sbjct: 482 RIW 484
Score = 262 (97.3 bits), Expect = 7.1e-20, P = 7.1e-20
Identities = 87/324 (26%), Positives = 149/324 (45%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC-TGHKNWVLCIAW--- 158
T GH VLS+++SPDG++LASG + + LWD +T + + TGH W+ ++W
Sbjct: 152 TCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPL 211
Query: 159 --SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
+ + +++ S SK G ++ WD G+ L+GH + +T + W L SA
Sbjct: 212 HANPECRYVASSSKDGSVRVWDTTAGRCE-RTLTGHAQSVTCLRWGGDGL------LYSA 264
Query: 217 SKDGDARIWDVSLRKCVIC--LSGHTLAVTCVKWGGDGVIYTGS---QDCTIKVWETTQG 271
S+D ++W V+C L GH V + D + TG+ + ++ + +G
Sbjct: 265 SQDRTIKVWRA--HDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNA-QDLRG 321
Query: 272 KLIRELKGHG-HWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALER-----YNKIK 325
L +ELK N + L +G+ D T +S E+ K A N++
Sbjct: 322 SL-QELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVV 380
Query: 326 GNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+ R++ S S D ++ LW+ K + + GH V + +S D + + S S D ++
Sbjct: 381 FSPDSRVIASASFDKSIKLWDGRTGKYLAS-LRGHVAAVYQIAWSADSRLLVSGSSDSTL 439
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQI 408
K+W+ K GH VY +
Sbjct: 440 KVWDVKAQKLSTDLPGHADEVYAV 463
Score = 250 (93.1 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 81/297 (27%), Positives = 135/297 (45%)
Query: 104 IAGHTEAVLSVAF-----SPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+ GH++ + ++++ +P+ R +AS S D +VR+WD TGH V C+ W
Sbjct: 196 LTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRW 255
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
DG L S S+ ++ W G L GH W+ ++ L+ A +
Sbjct: 256 GGDGL-LYSASQDRTIKVWRAHDGVLC-RTLQGHGHWVNTMA-----LSTDYALRTGAFE 308
Query: 219 DGDARIWDVSLRKCVICLSGHTLA-VTCVKWGGDGVIYTGSQDCTIKVWETTQGKL-IRE 276
+A + LR + L L+ V+ G + +GS D T+ +W + K +
Sbjct: 309 PAEASVNAQDLRGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLAR 368
Query: 277 LKGHGHWVNSLALSTEY-ALRTGAFDHTGKQYSSPEEMKKAALERY----NKIKGNAPER 331
+ GH +N + S + + + +FD + K + A+L + +I +A R
Sbjct: 369 MTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR 428
Query: 332 L-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
L VSGS D T+ +W+ K T + GH V V +SPDGQ VAS DK +++W
Sbjct: 429 LLVSGSSDSTLKVWDVKAQKL-STDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 484
Score = 200 (75.5 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 48/124 (38%), Positives = 62/124 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
A + GH + V FSPD R +AS S D +++LWD T + GH V IAWSAD
Sbjct: 367 ARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSAD 426
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ LVSGS L+ WD + K S + L GH + + W P +R S KD
Sbjct: 427 SRLLVSGSSDSTLKVWDVKAQKLSTD-LPGHADEVYAVDWSP-----DGQRVASGGKDKC 480
Query: 222 ARIW 225
RIW
Sbjct: 481 LRIW 484
Score = 138 (53.6 bits), Expect = 3.1e-140, Sum P(2) = 3.1e-140
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+S DSR++ S S D ++K+WD RT K L GH V+ + WS D + SG D LK
Sbjct: 381 FSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLK 440
Query: 497 LW 498
+W
Sbjct: 441 VW 442
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
++S + L SGS D+T++ WD+ T+ GH V ++ WSPDG+K+ASG K+ +
Sbjct: 122 AFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQI 181
Query: 496 KLW 498
LW
Sbjct: 182 LLW 184
Score = 130 (50.8 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
Identities = 40/145 (27%), Positives = 74/145 (51%)
Query: 277 LKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALE--RYNKIKGN-APE-- 330
L+GH V S+A S T L +G+ D T + + E + R+ + + +P+
Sbjct: 111 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGK 170
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHV-----YFSPDGQWVASASFDKSIK 385
+L SG + + LW+P+ KQ +TGH + + + + +P+ ++VAS+S D S++
Sbjct: 171 KLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVR 230
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRF 410
+W+ T G+ GH V +R+
Sbjct: 231 VWDTTAGRCERTLTGHAQSVTCLRW 255
Score = 91 (37.1 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 444 LLSGSKDSTLKVWD-IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLWMG 500
L+SGS D TL +W +K + GH + V +SPD +AS D+ +KLW G
Sbjct: 345 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDG 402
Score = 69 (29.3 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 18/46 (39%), Positives = 22/46 (47%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPD 482
W D LL S S+D T+KVW L + L GH V + S D
Sbjct: 255 WGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 299
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 1254 (446.5 bits), Expect = 3.9e-155, Sum P(2) = 3.9e-155
Identities = 232/415 (55%), Positives = 292/415 (70%)
Query: 3 IETETTNNVMCLLT---DPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYIS 59
+E +V LL D G LG+P P + P +L + N LL EE LP AFY+
Sbjct: 6 VEEAAAGDVQRLLVQFQDEGGQLLGSPFDVPVDITPDKLQLVCNALLAQEEPLPLAFYVH 65
Query: 60 DHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPD 119
D E++ LG LE V EK++ I+YQPQAVFR+R V RC++++ GH+EAV+SVAFSP
Sbjct: 66 DAEIVSSLGKTLESQSVETEKIVDIIYQPQAVFRVRAVTRCTSSLEGHSEAVISVAFSPT 125
Query: 120 GRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDP 179
G+ LASGSGDTTVR WDL+T+TP F C GH++WVL I+WS DGK L SG K G++ WDP
Sbjct: 126 GKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQVLLWDP 185
Query: 180 QTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGH 239
TG G L+GH KWITG+SWEP+H+N CR S+SKDG R+WD + +C L+GH
Sbjct: 186 STGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGH 245
Query: 240 TLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGA 299
T +VTC++WGGDG++Y+ SQD TIKVW G L R L+GHGHWVN++ALST+YALRTGA
Sbjct: 246 TQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGA 305
Query: 300 FD------HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPK 353
F+ + S +E+K+ A RYN ++G PERLVSGSDDFT+FLW PA K+P
Sbjct: 306 FEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPL 365
Query: 354 TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
RMTGHQ L+N V FSPD + VASASFDKSIKLW+G TGK++A RGHV VYQI
Sbjct: 366 ARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI 420
Score = 280 (103.6 bits), Expect = 3.9e-155, Sum P(2) = 3.9e-155
Identities = 48/63 (76%), Positives = 58/63 (92%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
+WSADSRLL+SGS DSTLKVWD++ QKL DLPGHADEV+AVDWSPDG++VASGGKD+ L
Sbjct: 421 AWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCL 480
Query: 496 KLW 498
++W
Sbjct: 481 RIW 483
Score = 270 (100.1 bits), Expect = 8.6e-21, P = 8.6e-21
Identities = 91/324 (28%), Positives = 149/324 (45%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC-TGHKNWVLCIAW--- 158
T GH VLS+++SPDG++LASG + V LWD +T + + TGH W+ ++W
Sbjct: 151 TCKGHRHWVLSISWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPL 210
Query: 159 --SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
+ + +++ S SK G ++ WD G+ L+GH + +T + W L SA
Sbjct: 211 HMNPECRYVASSSKDGSVRVWDTTAGRCE-RILTGHTQSVTCLRWGGDGL------LYSA 263
Query: 217 SKDGDARIWDVSLRKCVIC--LSGHTLAVTCVKWGGDGVIYTGS---QDCTIKVWETTQG 271
S+D ++W V+C L GH V + D + TG+ + T+ + QG
Sbjct: 264 SQDRTIKVWRA--HDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNA-QDLQG 320
Query: 272 KLIRELKGHGHWVNSLALST-EYALRTGAFDHTGKQYSSPEEMKKAALER-----YNKIK 325
L +ELK +L L +G+ D T +S E+ K A N++
Sbjct: 321 SL-KELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVL 379
Query: 326 GNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+ R+V S S D ++ LW+ K + + GH V + +S D + + S S D ++
Sbjct: 380 FSPDSRIVASASFDKSIKLWDGRTGKYLAS-LRGHVAAVYQIAWSADSRLLVSGSSDSTL 438
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQI 408
K+W+ K GH VY +
Sbjct: 439 KVWDVKAQKLATDLPGHADEVYAV 462
Score = 241 (89.9 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 82/297 (27%), Positives = 132/297 (44%)
Query: 103 TIAGHTEAVLSVAF-----SPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
T+ GH++ + +++ +P+ R +AS S D +VR+WD TGH V C+
Sbjct: 194 TLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLR 253
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
W DG L S S+ ++ W G L GH W+ ++ + F A
Sbjct: 254 WGGDGL-LYSASQDRTIKVWRAHDGVLC-RTLQGHGHWVNTMALSTDYA-LRTGAFEPAE 310
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKL-IRE 276
+A+ SL++ S V+ G + +GS D T+ +W + K +
Sbjct: 311 ATVNAQDLQGSLKELKERASSR---YNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLAR 367
Query: 277 LKGHGHWVNSLALSTEYALRTGA-FDHTGKQYSSPEEMKKAALERY----NKIKGNAPER 331
+ GH +N + S + + A FD + K + A+L + +I +A R
Sbjct: 368 MTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR 427
Query: 332 L-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
L VSGS D T+ +W+ K T + GH V V +SPDGQ VAS DK +++W
Sbjct: 428 LLVSGSSDSTLKVWDVKAQKLA-TDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 194 (73.4 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 47/124 (37%), Positives = 62/124 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
A + GH + V FSPD R +AS S D +++LWD T + GH V IAWSAD
Sbjct: 366 ARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSAD 425
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ LVSGS L+ WD + K + + L GH + + W P +R S KD
Sbjct: 426 SRLLVSGSSDSTLKVWDVKAQKLATD-LPGHADEVYAVDWSP-----DGQRVASGGKDKC 479
Query: 222 ARIW 225
RIW
Sbjct: 480 LRIW 483
Score = 147 (56.8 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 77/311 (24%), Positives = 123/311 (39%)
Query: 208 APCRRFV-SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKV 265
+P +++ S S D R WD+S GH V + W DG + +G ++ + +
Sbjct: 123 SPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQVLL 182
Query: 266 WETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIK 325
W+ + G + GH +++ TG + P M RY
Sbjct: 183 WDPSTGLQVGRTLT-GH--------SKWI--------TGLSWE-PLHMNPEC--RY---- 218
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
+ S S D ++ +W+ + + +TGH Q V + + DG + SAS D++IK
Sbjct: 219 ------VASSSKDGSVRVWDTTAGRCERI-LTGHTQSVTCLRWGGDGL-LYSASQDRTIK 270
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRY----PSNFYC-VVDMSCCMSLYSWSAD 440
+W G +GH V + Y R P+ D+ + A
Sbjct: 271 VWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKELKERAS 330
Query: 441 SRL----------LLSGSKDSTLKVWD-IRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
SR L+SGS D TL +W +K + GH + V +SPD VAS
Sbjct: 331 SRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASA 390
Query: 490 GKDRVLKLWMG 500
D+ +KLW G
Sbjct: 391 SFDKSIKLWDG 401
Score = 138 (53.6 bits), Expect = 3.9e-140, Sum P(2) = 3.9e-140
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+S DSR++ S S D ++K+WD RT K L GH V+ + WS D + SG D LK
Sbjct: 380 FSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLK 439
Query: 497 LW 498
+W
Sbjct: 440 VW 441
Score = 133 (51.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
++S + L SGS D+T++ WD+ T+ GH V ++ WSPDG+K+ASG K+ +
Sbjct: 121 AFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQV 180
Query: 496 KLW 498
LW
Sbjct: 181 LLW 183
Score = 127 (49.8 bits), Expect = 3.5e-31, Sum P(2) = 3.5e-31
Identities = 39/145 (26%), Positives = 74/145 (51%)
Query: 277 LKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALE--RYNKIKGN-APE-- 330
L+GH V S+A S T L +G+ D T + + E + R+ + + +P+
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGK 169
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHV-----YFSPDGQWVASASFDKSIK 385
+L SG + + LW+P+ Q +TGH + + + + +P+ ++VAS+S D S++
Sbjct: 170 KLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVR 229
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRF 410
+W+ T G+ + GH V +R+
Sbjct: 230 VWDTTAGRCERILTGHTQSVTCLRW 254
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 1247 (444.0 bits), Expect = 2.1e-154, Sum P(2) = 2.1e-154
Identities = 228/398 (57%), Positives = 285/398 (71%)
Query: 17 DPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKV 76
D G LG+P P + P +L + N LL E+ LP AFY+ D E++ LG LE V
Sbjct: 23 DEGGQLLGSPFDVPVDITPDKLQLVCNALLAQEDPLPLAFYVHDAEIISSLGKTLESQAV 82
Query: 77 SVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
EKVL I+YQPQAVFR+R V RC++++ GH+EAV+SVAFSP G+ LASGSGDTTVR WD
Sbjct: 83 ETEKVLDIIYQPQAVFRVRAVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWD 142
Query: 137 LNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWI 196
L+T+TP F C GH++WVL I+WS DGK L SG K G++ WDP TGK G L+GH KWI
Sbjct: 143 LSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWI 202
Query: 197 TGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYT 256
T +SWEP+H N CR S+SKDG R+WD + +C L+GHT +VTC++WGGDG++Y+
Sbjct: 203 TALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYS 262
Query: 257 GSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS------SP 310
SQD TIKVW G L R L+GHGHWVN++ALST+YALRTGAF+ + S
Sbjct: 263 ASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSL 322
Query: 311 EEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSP 370
+E+K+ AL RYN ++G ERLVSGSDDFT+FLW PA K+P RMTGHQ L+N V FSP
Sbjct: 323 QELKERALSRYNLVRGRGLERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSP 382
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
D + +ASASFDKSIKLW+G TGK++A RGHV VYQI
Sbjct: 383 DSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI 420
Score = 280 (103.6 bits), Expect = 2.1e-154, Sum P(2) = 2.1e-154
Identities = 48/63 (76%), Positives = 58/63 (92%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
+WSADSRLL+SGS DSTLKVWD++ QKL DLPGHADEV+AVDWSPDG++VASGGKD+ L
Sbjct: 421 AWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCL 480
Query: 496 KLW 498
++W
Sbjct: 481 RIW 483
Score = 260 (96.6 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 87/324 (26%), Positives = 149/324 (45%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC-TGHKNWVLCIAW--- 158
T GH VLS+++SPDG++LASG + + LWD +T + + GH W+ ++W
Sbjct: 151 TCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPL 210
Query: 159 --SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
+ + +++ S SK G ++ WD G+ L+GH + +T + W L SA
Sbjct: 211 HANPECRYVASSSKDGSVRVWDTTAGRCE-RILTGHTQSVTCLRWGGDGL------LYSA 263
Query: 217 SKDGDARIWDVSLRKCVIC--LSGHTLAVTCVKWGGDGVIYTGS---QDCTIKVWETTQG 271
S+D ++W V+C L GH V + D + TG+ + ++ + +G
Sbjct: 264 SQDRTIKVWRA--HDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNA-QDLRG 320
Query: 272 KLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALER-----YNKIK 325
L +ELK +L L +G+ D T +S E+ K A N++
Sbjct: 321 SL-QELKERALSRYNLVRGRGLERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVL 379
Query: 326 GNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+ R++ S S D ++ LW+ K + + GH V + +S D + + S S D ++
Sbjct: 380 FSPDSRIIASASFDKSIKLWDGRTGKYLAS-LRGHVAAVYQIAWSADSRLLVSGSSDSTL 438
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQI 408
K+W+ K A GH VY +
Sbjct: 439 KVWDVKAQKLAADLPGHADEVYAV 462
Score = 241 (89.9 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 82/297 (27%), Positives = 134/297 (45%)
Query: 104 IAGHTEAVLSVAF-----SPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+AGH++ + ++++ +P+ R +AS S D +VR+WD TGH V C+ W
Sbjct: 195 LAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRW 254
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
DG L S S+ ++ W G L GH W+ ++ L+ A +
Sbjct: 255 GGDGL-LYSASQDRTIKVWRAHDGVLC-RTLQGHGHWVNTMA-----LSTDYALRTGAFE 307
Query: 219 DGDARIWDVSLRKCVICLSGHTLA-VTCVKWGGDGVIYTGSQDCTIKVWETTQGKL-IRE 276
+A + LR + L L+ V+ G + +GS D T+ +W + K +
Sbjct: 308 PAEASVNAQDLRGSLQELKERALSRYNLVRGRGLERLVSGSDDFTLFLWSPAEDKKPLAR 367
Query: 277 LKGHGHWVNSLALSTEYALRTGA-FDHTGKQYSSPEEMKKAALERY----NKIKGNAPER 331
+ GH +N + S + + A FD + K + A+L + +I +A R
Sbjct: 368 MTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR 427
Query: 332 L-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
L VSGS D T+ +W+ K + GH V V +SPDGQ VAS DK +++W
Sbjct: 428 LLVSGSSDSTLKVWDVKAQKLAAD-LPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 197 (74.4 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 47/124 (37%), Positives = 62/124 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
A + GH + V FSPD R +AS S D +++LWD T + GH V IAWSAD
Sbjct: 366 ARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSAD 425
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ LVSGS L+ WD + K + + L GH + + W P +R S KD
Sbjct: 426 SRLLVSGSSDSTLKVWDVKAQKLAAD-LPGHADEVYAVDWSP-----DGQRVASGGKDKC 479
Query: 222 ARIW 225
RIW
Sbjct: 480 LRIW 483
Score = 139 (54.0 bits), Expect = 1.7e-139, Sum P(2) = 1.7e-139
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+S DSR++ S S D ++K+WD RT K L GH V+ + WS D + SG D LK
Sbjct: 380 FSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLK 439
Query: 497 LW 498
+W
Sbjct: 440 VW 441
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
++S + L SGS D+T++ WD+ T+ GH V ++ WSPDG+K+ASG K+ +
Sbjct: 121 AFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQI 180
Query: 496 KLW 498
LW
Sbjct: 181 LLW 183
Score = 128 (50.1 bits), Expect = 2.7e-31, Sum P(2) = 2.7e-31
Identities = 39/145 (26%), Positives = 74/145 (51%)
Query: 277 LKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALE--RYNKIKGN-APE-- 330
L+GH V S+A S T L +G+ D T + + E + R+ + + +P+
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGK 169
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHV-----YFSPDGQWVASASFDKSIK 385
+L SG + + LW+P+ KQ + GH + + + + +P+ ++VAS+S D S++
Sbjct: 170 KLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVR 229
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRF 410
+W+ T G+ + GH V +R+
Sbjct: 230 VWDTTAGRCERILTGHTQSVTCLRW 254
Score = 89 (36.4 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 444 LLSGSKDSTLKVWD-IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLWMG 500
L+SGS D TL +W +K + GH + V +SPD +AS D+ +KLW G
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDG 401
Score = 69 (29.3 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 18/46 (39%), Positives = 22/46 (47%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPD 482
W D LL S S+D T+KVW L + L GH V + S D
Sbjct: 254 WGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 298
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 1223 (435.6 bits), Expect = 5.1e-151, Sum P(2) = 5.1e-151
Identities = 227/410 (55%), Positives = 282/410 (68%)
Query: 5 TETTNNVMCLLTDPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYISDHELL 64
TE ++ D G PLG+P P + P +L + N LL +E +P AF+ D E++
Sbjct: 24 TEDVERLLIQFRDEAGEPLGSPFDVPVSITPDKLQLVCNALLQQDEPVPLAFFFHDAEIV 83
Query: 65 VPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLA 124
V L L V EKVL I+YQPQAVFR+R V RC++++ GHTEAV+SVAFSP G+ LA
Sbjct: 84 VSLEKTLAGQAVETEKVLDIIYQPQAVFRVRAVTRCTSSLEGHTEAVISVAFSPTGKYLA 143
Query: 125 SGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKP 184
SGSGDTTVR WDL+T+TP F GH++WVL IAWS DGK L SG K ++ WDP TG
Sbjct: 144 SGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGKKLASGCKNSQIFLWDPATGNQ 203
Query: 185 SGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVT 244
G L+GH KWIT + WEP+H+N CR SASKDG RIWD + +C L+GHT +VT
Sbjct: 204 IGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDTLMGRCDKILTGHTQSVT 263
Query: 245 CVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFD--- 301
CVKWGGDG++Y+ SQD TIKVW + G L R L+GH HWVN++ALST+Y LRTGAF+
Sbjct: 264 CVKWGGDGLLYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMALSTDYVLRTGAFEPAE 323
Query: 302 ---HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTG 358
+ S E+K A +RY+K++G PERLVSGSDDFT+FLW PA K+P RMTG
Sbjct: 324 ATINPQDMSGSLAELKDKAQQRYDKVRGQGPERLVSGSDDFTLFLWRPAEDKKPLERMTG 383
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
HQ L+N V FSPD + +ASASFDKSIKLW G TGK++ RGHV VYQI
Sbjct: 384 HQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQI 433
Score = 286 (105.7 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 95/324 (29%), Positives = 152/324 (46%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC-TGHKNWVLCIAW--- 158
T GH VLS+A+SPDG++LASG ++ + LWD T + + TGH W+ C+ W
Sbjct: 164 TAKGHRHWVLSIAWSPDGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPL 223
Query: 159 --SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
+ + ++L S SK G ++ WD G+ L+GH + +T + W L S+
Sbjct: 224 HINPECRYLASASKDGSIRIWDTLMGR-CDKILTGHTQSVTCVKWGGDGL------LYSS 276
Query: 217 SKDGDARIWDVSLRKCVIC--LSGHTLAVTCVKWGGDGVIYTGS---QDCTIKVWETTQG 271
S+D ++W + ++C L GH V + D V+ TG+ + TI + + G
Sbjct: 277 SQDRTIKVW--RSQDGILCRTLQGHAHWVNTMALSTDYVLRTGAFEPAEATINPQDMS-G 333
Query: 272 KLIRELKGHGHW-VNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY-------NK 323
L ELK + + L +G+ D T + P E KK LER N+
Sbjct: 334 SLA-ELKDKAQQRYDKVRGQGPERLVSGSDDFTLFLWR-PAEDKKP-LERMTGHQALINQ 390
Query: 324 IKGNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
+ + R++ S S D ++ LWE K T + GH V + +S D + + S S D
Sbjct: 391 VLFSPDTRIIASASFDKSIKLWEGRTGKY-LTSLRGHVSAVYQIAWSADSRLLVSGSSDS 449
Query: 383 SIKLWNGTTGKFVAVFRGHVGPVY 406
++K+W+ T K GH V+
Sbjct: 450 TLKVWDAETKKLAIDLPGHADEVF 473
Score = 272 (100.8 bits), Expect = 5.1e-151, Sum P(2) = 5.1e-151
Identities = 48/63 (76%), Positives = 56/63 (88%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
+WSADSRLL+SGS DSTLKVWD T+KL DLPGHADEVFA DWSPDG++VASGGKD+ L
Sbjct: 434 AWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVASGGKDKCL 493
Query: 496 KLW 498
++W
Sbjct: 494 RIW 496
Score = 232 (86.7 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 83/307 (27%), Positives = 137/307 (44%)
Query: 98 NRCSATIAGHTEAVLSVAF-----SPDGRQLASGSGDTTVRLWDLNTQTPMFKC----TG 148
N+ + GH++ + + + +P+ R LAS S D ++R+WD T M +C TG
Sbjct: 202 NQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWD----TLMGRCDKILTG 257
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA 208
H V C+ W DG L S S+ ++ W Q G L GH W+ ++ ++
Sbjct: 258 HTQSVTCVKWGGDGL-LYSSSQDRTIKVWRSQDGILC-RTLQGHAHWVNTMALSTDYV-- 313
Query: 209 PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLA-VTCVKWGGDGVIYTGSQDCTIKVWE 267
R A + +A I + + L V+ G + +GS D T+ +W
Sbjct: 314 -LR--TGAFEPAEATINPQDMSGSLAELKDKAQQRYDKVRGQGPERLVSGSDDFTLFLWR 370
Query: 268 TTQGKL-IRELKGHGHWVNSLALSTEYALRTGA-FDHTGKQYSSPEEMKKAALERY---- 321
+ K + + GH +N + S + + A FD + K + +L +
Sbjct: 371 PAEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAV 430
Query: 322 NKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF 380
+I +A RL VSGS D T+ +W+ A +K+ + GH V +SPDGQ VAS
Sbjct: 431 YQIAWSADSRLLVSGSSDSTLKVWD-AETKKLAIDLPGHADEVFATDWSPDGQRVASGGK 489
Query: 381 DKSIKLW 387
DK +++W
Sbjct: 490 DKCLRIW 496
Score = 147 (56.8 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 54/185 (29%), Positives = 82/185 (44%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L S S D ++ +W+ + + K +TGH Q V V + DG + S+S D++IK+W
Sbjct: 232 LASASKDGSIRIWDTLMGRCDKI-LTGHTQSVTCVKWGGDGL-LYSSSQDRTIKVWRSQD 289
Query: 392 GKFVAVFRGHVGPVYQIRFELIYCFRY----PSNFYC-VVDMSCCMSLYSWSADSRL--- 443
G +GH V + Y R P+ DMS ++ A R
Sbjct: 290 GILCRTLQGHAHWVNTMALSTDYVLRTGAFEPAEATINPQDMSGSLAELKDKAQQRYDKV 349
Query: 444 -------LLSGSKDSTLKVW-DIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
L+SGS D TL +W +K + + GH + V +SPD +AS D+ +
Sbjct: 350 RGQGPERLVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSI 409
Query: 496 KLWMG 500
KLW G
Sbjct: 410 KLWEG 414
Score = 134 (52.2 bits), Expect = 1.9e-136, Sum P(2) = 1.9e-136
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+S D+R++ S S D ++K+W+ RT K L GH V+ + WS D + SG D LK
Sbjct: 393 FSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLK 452
Query: 497 LW 498
+W
Sbjct: 453 VW 454
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 25/63 (39%), Positives = 40/63 (63%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
++S + L SGS D+T++ WD+ T+ + GH V ++ WSPDG+K+ASG K+ +
Sbjct: 134 AFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGKKLASGCKNSQI 193
Query: 496 KLW 498
LW
Sbjct: 194 FLW 196
Score = 130 (50.8 bits), Expect = 2.1e-30, Sum P(2) = 2.1e-30
Identities = 42/145 (28%), Positives = 74/145 (51%)
Query: 277 LKGHGHWVNSLALS-TEYALRTGAFDHTGKQYS-SPEEMKKAALERYNKIKGNA--PE-- 330
L+GH V S+A S T L +G+ D T + + S E + A + + A P+
Sbjct: 123 LEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGK 182
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN-----HVYFSPDGQWVASASFDKSIK 385
+L SG + +FLW+PA Q +TGH + + ++ +P+ +++ASAS D SI+
Sbjct: 183 KLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIR 242
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRF 410
+W+ G+ + GH V +++
Sbjct: 243 IWDTLMGRCDKILTGHTQSVTCVKW 267
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 1220 (434.5 bits), Expect = 1.7e-150, Sum P(2) = 1.7e-150
Identities = 219/394 (55%), Positives = 292/394 (74%)
Query: 17 DPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKV 76
D E + G P+ QN +QL ++N LLNN+E+LPY+F+++D E+ L ++LE +
Sbjct: 51 DSENDTTGPPINISQNVTTEQLQMLINSLLNNDEQLPYSFFVNDQEITNNLKNHLEG--L 108
Query: 77 SVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
S E LSI YQPQAVFR+RPV RC+++++GHTEAVL+ AFSPDG+ S GDTTVR+WD
Sbjct: 109 SDETTLSIYYQPQAVFRVRPVTRCASSMSGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWD 168
Query: 137 LNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWI 196
+ T TP GH NWVL +AWS D K + + G+++ W PQTGK G+ L GH K+I
Sbjct: 169 IYTSTPTHTLKGHTNWVLQVAWSPDSKKIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFI 228
Query: 197 TGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYT 256
TG+SWEP HLN C R S+SKD RIWD K ++ LSGHT++VTC+KWGG+G+IY+
Sbjct: 229 TGLSWEPFHLNPKCVRLASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWGGEGLIYS 288
Query: 257 GSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKA 316
GSQD T++V+ TT G+L+R L GH HWVN+LAL+T+Y LRTG++DHTGK+Y + EE ++
Sbjct: 289 GSQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALNTDYVLRTGSYDHTGKEYDTLEEAQRV 348
Query: 317 ALERYNKIKGNAP--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQW 374
ALERYN +K + E L+SGSDDFT+ +W P+V+K +R+TGHQQL+N V FSPDG++
Sbjct: 349 ALERYNDVKAKSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRY 408
Query: 375 VASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
ASASFDKSIKLW+G +GKF+ FRGHVG VYQ+
Sbjct: 409 FASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQV 442
Score = 303 (111.7 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 67/151 (44%), Positives = 92/151 (60%)
Query: 323 KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
K K E L+SGSDDFT+ +W P+V+K +R+TGHQQL+N V FSPDG++ ASASFDK
Sbjct: 357 KAKSKGMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDK 416
Query: 383 SIKLWNGTTGKFVAVFRGHVGPVYQIRF--ELIYCFRYPSNFYCVV-DMSC--------- 430
SIKLW+G +GKF+ FRGHVG VYQ+ + + Y + + D+
Sbjct: 417 SIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKMEKELPG 476
Query: 431 -CMSLYS--WSADSRLLLSGSKDSTLKVWDI 458
+Y+ WS D + SGSKD L++W +
Sbjct: 477 HADEVYTVDWSPDGDRVASGSKDRLLRIWTV 507
Score = 270 (100.1 bits), Expect = 1.7e-150, Sum P(2) = 1.7e-150
Identities = 44/62 (70%), Positives = 59/62 (95%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
WS+DSR L+SGSKDSTLK+WDI+T+K++++LPGHADEV+ VDWSPDG++VASG KDR+L+
Sbjct: 444 WSSDSRYLVSGSKDSTLKIWDIKTKKMEKELPGHADEVYTVDWSPDGDRVASGSKDRLLR 503
Query: 497 LW 498
+W
Sbjct: 504 IW 505
Score = 231 (86.4 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 75/298 (25%), Positives = 140/298 (46%)
Query: 102 ATIAGHTEAVLSVAFSP---DGR--QLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI 156
+T+ GHT+ + +++ P + + +LAS S D+T+R+WD + + +GH V C+
Sbjct: 219 STLKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCL 278
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
W +G + SGS+ ++ ++ G+ L GH W+ ++ ++ + R +
Sbjct: 279 KWGGEGL-IYSGSQDRTVRVFNTTDGRLV-RVLDGHAHWVNTLA---LNTDYVLR---TG 330
Query: 217 SKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKL-IR 275
S D + +D + L + K G ++ +GS D T+ +W + K I
Sbjct: 331 SYDHTGKEYDTLEEAQRVALERYNDVKAKSK--GMEILISGSDDFTVIMWNPSVTKTSIS 388
Query: 276 ELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMK----KAALERYNKIKGNAPE 330
L GH +N ++ S + + +FD + K + + + ++ ++
Sbjct: 389 RLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDS 448
Query: 331 R-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
R LVSGS D T+ +W+ K K + GH V V +SPDG VAS S D+ +++W
Sbjct: 449 RYLVSGSKDSTLKIWDIKTKKMEK-ELPGHADEVYTVDWSPDGDRVASGSKDRLLRIW 505
Score = 229 (85.7 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 85/320 (26%), Positives = 144/320 (45%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT-GHKNWVLCIAWSA- 160
T+ GHT VL VA+SPD +++A+ + +R+W T + GH ++ ++W
Sbjct: 177 TLKGHTNWVLQVAWSPDSKKIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPF 236
Query: 161 --DGK--HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
+ K L S SK ++ WD ++ K + LSGH +T + W L S
Sbjct: 237 HLNPKCVRLASSSKDSTIRIWDTESCKNLMS-LSGHTMSVTCLKWGGEGL------IYSG 289
Query: 217 SKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRE 276
S+D R+++ + + V L GH V + D V+ TGS D T K ++T +
Sbjct: 290 SQDRTVRVFNTTDGRLVRVLDGHAHWVNTLALNTDYVLRTGSYDHTGKEYDTLEEAQRVA 349
Query: 277 LKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY-------NKIKGNAP 329
L+ + V + + E + +G+ D T ++ P + K ++ R N + +
Sbjct: 350 LERYND-VKAKSKGMEILI-SGSDDFTVIMWN-PS-VTKTSISRLTGHQQLINLVSFSPD 405
Query: 330 ER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
R S S D ++ LW+ K GH V V +S D +++ S S D ++K+W+
Sbjct: 406 GRYFASASFDKSIKLWDGQSGKF-LGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWD 464
Query: 389 GTTGKFVAVFRGHVGPVYQI 408
T K GH VY +
Sbjct: 465 IKTKKMEKELPGHADEVYTV 484
Score = 204 (76.9 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 47/124 (37%), Positives = 64/124 (51%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH + + V+FSPDGR AS S D +++LWD + + GH V + WS+D +
Sbjct: 390 LTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSR 449
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+LVSGSK L+ WD +T K L GH + + W P R S SKD R
Sbjct: 450 YLVSGSKDSTLKIWDIKTKKME-KELPGHADEVYTVDWSP-----DGDRVASGSKDRLLR 503
Query: 224 IWDV 227
IW V
Sbjct: 504 IWTV 507
Score = 168 (64.2 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 52/182 (28%), Positives = 88/182 (48%)
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGT 390
RL S S D T+ +W+ K + ++GH V + + +G + S S D++++++N T
Sbjct: 244 RLASSSKDSTIRIWDTESCKNLMS-LSGHTMSVTCLKWGGEGL-IYSGSQDRTVRVFNTT 301
Query: 391 TGKFVAVFRGHVGPVYQIRFELIYCFR-----YPSNFYCVVDMSCCMSLYSWS---ADSR 442
G+ V V GH V + Y R + Y ++ + ++L ++ A S+
Sbjct: 302 DGRLVRVLDGHAHWVNTLALNTDYVLRTGSYDHTGKEYDTLEEAQRVALERYNDVKAKSK 361
Query: 443 ---LLLSGSKDSTLKVWDIRTQKLK-QDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+L+SGS D T+ +W+ K L GH + V +SPDG AS D+ +KLW
Sbjct: 362 GMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLW 421
Query: 499 MG 500
G
Sbjct: 422 DG 423
Score = 135 (52.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 26/67 (38%), Positives = 38/67 (56%)
Query: 432 MSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGK 491
++L S+S D R S S D ++K+WD ++ K + GH V+ V WS D + SG K
Sbjct: 397 INLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSK 456
Query: 492 DRVLKLW 498
D LK+W
Sbjct: 457 DSTLKIW 463
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
++S D + +S D+T+++WDI T L GH + V V WSPD +K+A+ G + +
Sbjct: 147 AFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSPDSKKIATAGMEGDI 206
Query: 496 KLW 498
++W
Sbjct: 207 RIW 209
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 1208 (430.3 bits), Expect = 2.8e-150, Sum P(2) = 2.8e-150
Identities = 217/366 (59%), Positives = 270/366 (73%)
Query: 49 EEKLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHT 108
E+ LP AFY+ D E+ LG LE V EKVL I+YQPQA+FR+R V RC++++ GH+
Sbjct: 6 EDPLPLAFYVHDAEITSSLGKTLESQAVETEKVLDIIYQPQAIFRVRAVTRCTSSLEGHS 65
Query: 109 EAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSG 168
EAV+SVAFSP G+ LASGSGDTTVR WDL+T+TP F C GH++WVL I+WS DGK L SG
Sbjct: 66 EAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKTLASG 125
Query: 169 SKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVS 228
K G++ WDP TGK G L+GH KWITG+SWEP+H N CR S+SKDG R+WD +
Sbjct: 126 CKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTT 185
Query: 229 LRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLA 288
+C L+GHT +VTC++WGGDG++Y+ SQD TIKVW G L R L+GHGHWVN++A
Sbjct: 186 AGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMA 245
Query: 289 LSTEYALRTGAFDHTGKQYS------SPEEMKKAALERYNKIKGNAPERLVSGSDDFTMF 342
LST+YALRTGAF+ + S +E+K AL RYN ++G PERLVSGSDDFT+F
Sbjct: 246 LSTDYALRTGAFEPAEASINAQDLQGSLQELKDRALRRYNLVRGQGPERLVSGSDDFTLF 305
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
+W PA K+P RMTGHQ L+N V FSPD + +ASASFDKSIKLW+G TGK++A RGHV
Sbjct: 306 MWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHV 365
Query: 403 GPVYQI 408
VYQI
Sbjct: 366 AAVYQI 371
Score = 280 (103.6 bits), Expect = 2.8e-150, Sum P(2) = 2.8e-150
Identities = 48/63 (76%), Positives = 58/63 (92%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
+WSADSRLL+SGS DSTLKVWD++ QKL DLPGHADEV+AVDWSPDG++VASGGKD+ L
Sbjct: 372 AWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCL 431
Query: 496 KLW 498
++W
Sbjct: 432 RIW 434
Score = 266 (98.7 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 89/324 (27%), Positives = 148/324 (45%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC-TGHKNWVLCIAW--- 158
T GH VLS+++SPDG+ LASG + + LWD +T + + GH W+ ++W
Sbjct: 102 TCQGHRHWVLSISWSPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPL 161
Query: 159 --SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
+ + +++ S SK G ++ WD G+ L+GH + +T + W L SA
Sbjct: 162 HANPECRYMASSSKDGSVRVWDTTAGRCE-RILTGHTQSVTCLRWGGDGL------LYSA 214
Query: 217 SKDGDARIWDVSLRKCVIC--LSGHTLAVTCVKWGGDGVIYTGS---QDCTIKVWETTQG 271
S+D ++W V+C L GH V + D + TG+ + +I + QG
Sbjct: 215 SQDRTIKVWRA--HDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASINA-QDLQG 271
Query: 272 KLIRELKGHG-HWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALER-----YNKIK 325
L +ELK N + L +G+ D T +S E+ K A N++
Sbjct: 272 SL-QELKDRALRRYNLVRGQGPERLVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVL 330
Query: 326 GNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+ R++ S S D ++ LW+ K + + GH V + +S D + + S S D ++
Sbjct: 331 FSPDSRIIASASFDKSIKLWDGRTGKYLAS-LRGHVAAVYQIAWSADSRLLVSGSSDSTL 389
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQI 408
K+W+ K A GH VY +
Sbjct: 390 KVWDVKAQKLAADLPGHADEVYAV 413
Score = 240 (89.5 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 82/297 (27%), Positives = 132/297 (44%)
Query: 104 IAGHTEAVLSVAF-----SPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+AGH++ + +++ +P+ R +AS S D +VR+WD TGH V C+ W
Sbjct: 146 LAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRW 205
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
DG L S S+ ++ W G L GH W+ ++ L+ A +
Sbjct: 206 GGDGL-LYSASQDRTIKVWRAHDGVLC-RTLQGHGHWVNTMA-----LSTDYALRTGAFE 258
Query: 219 DGDARIWDVSLRKCVICLSGHTLA-VTCVKWGGDGVIYTGSQDCTIKVWETTQGKL-IRE 276
+A I L+ + L L V+ G + +GS D T+ +W + K +
Sbjct: 259 PAEASINAQDLQGSLQELKDRALRRYNLVRGQGPERLVSGSDDFTLFMWSPAEDKKPLAR 318
Query: 277 LKGHGHWVNSLALSTEYALRTGA-FDHTGKQYSSPEEMKKAALERY----NKIKGNAPER 331
+ GH +N + S + + A FD + K + A+L + +I +A R
Sbjct: 319 MTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSR 378
Query: 332 L-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
L VSGS D T+ +W+ K + GH V V +SPDGQ VAS DK +++W
Sbjct: 379 LLVSGSSDSTLKVWDVKAQKLAAD-LPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 434
Score = 197 (74.4 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 47/124 (37%), Positives = 62/124 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
A + GH + V FSPD R +AS S D +++LWD T + GH V IAWSAD
Sbjct: 317 ARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSAD 376
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ LVSGS L+ WD + K + + L GH + + W P +R S KD
Sbjct: 377 SRLLVSGSSDSTLKVWDVKAQKLAAD-LPGHADEVYAVDWSP-----DGQRVASGGKDKC 430
Query: 222 ARIW 225
RIW
Sbjct: 431 LRIW 434
Score = 151 (58.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 66/271 (24%), Positives = 115/271 (42%)
Query: 228 SLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNS 286
++ +C L GH+ AV V + G + +GS D T++ W+ + +GH HWV S
Sbjct: 53 AVTRCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLS 112
Query: 287 LALSTE-YALRTGA-------FD-HTGKQYSS--PEEMKKAALERYNKIKGNAPER-LVS 334
++ S + L +G +D TGKQ K + + N R + S
Sbjct: 113 ISWSPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMAS 172
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF 394
S D ++ +W+ + + +TGH Q V + + DG + SAS D++IK+W G
Sbjct: 173 SSKDGSVRVWDTTAGRCERI-LTGHTQSVTCLRWGGDGL-LYSASQDRTIKVWRAHDGVL 230
Query: 395 VAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLK 454
+GH V + Y R + + + S + D + L KD L+
Sbjct: 231 CRTLQGHGHWVNTMALSTDYALR--TGAFEPAEASIN------AQDLQGSLQELKDRALR 282
Query: 455 VWDIRTQKLKQDLPGHADEVFAVDWSPDGEK 485
+++ + + L +D+ WSP +K
Sbjct: 283 RYNLVRGQGPERLVSGSDDFTLFMWSPAEDK 313
Score = 139 (54.0 bits), Expect = 2.2e-135, Sum P(2) = 2.2e-135
Identities = 26/62 (41%), Positives = 36/62 (58%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+S DSR++ S S D ++K+WD RT K L GH V+ + WS D + SG D LK
Sbjct: 331 FSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLK 390
Query: 497 LW 498
+W
Sbjct: 391 VW 392
Score = 128 (50.1 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
++S + L SGS D+T++ WD+ T+ GH V ++ WSPDG+ +ASG K+ +
Sbjct: 72 AFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKTLASGCKNGQI 131
Query: 496 KLW 498
LW
Sbjct: 132 LLW 134
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 1132 (403.5 bits), Expect = 8.2e-115, P = 8.2e-115
Identities = 214/415 (51%), Positives = 279/415 (67%)
Query: 2 EIETE---TTNNVMCLLTDPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYI 58
E +TE T + + L G G P+ P QQL I N LL NEE PY F++
Sbjct: 10 ETDTEQEATPHTIQARLVSDTGEEAGPPIDLPAGITTQQLGLICNALLKNEEATPYLFFV 69
Query: 59 SDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSP 118
+ E+ L L+ V E V+ IVYQPQAVF++RPV RC++++ GH EAV+S+ FSP
Sbjct: 70 GEDEIKKSLEDTLDLASVDTENVIDIVYQPQAVFKVRPVTRCTSSMPGHAEAVVSLNFSP 129
Query: 119 DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
DG LASGSGDTTVRLWDLNT+TP F CTGHK WVLC++W+ DGK L SG KAG + WD
Sbjct: 130 DGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPDGKRLASGCKAGSIIIWD 189
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSG 238
P+TG+ G PLSGHKK I ++WEP H + CR+ SAS DGD RIWDV L +C++ ++G
Sbjct: 190 PETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKLGQCLMNIAG 249
Query: 239 HTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTG 298
HT AVT V+WGG G+IYT S+D T+K+W G L R GH HWVN++ALST+Y LRTG
Sbjct: 250 HTNAVTAVRWGGAGLIYTSSKDRTVKMWRAADGILCRTFSGHAHWVNNIALSTDYVLRTG 309
Query: 299 AF----DHTGKQYS-SPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPK 353
F D + S S EE++++AL+RY + + E LVS SDD T++LW +K +
Sbjct: 310 PFHPVKDRSKSHLSLSTEELQESALKRYQAVCPDEVESLVSCSDDNTLYLWRNNQNKCVE 369
Query: 354 TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
RMTGHQ +VN V +SPD + +ASASFDKS++LW + G+++A FRGHV VY +
Sbjct: 370 -RMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTV 423
Score = 293 (108.2 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 65/145 (44%), Positives = 87/145 (60%)
Query: 370 PDG-QWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF----ELIYC--------- 415
PD + + S S D ++ LW K V GH V +++ +LI
Sbjct: 342 PDEVESLVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRL 401
Query: 416 FRYPSNFYCVVDMSCCMSLYS--WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADE 473
+R Y ++Y+ WSADSRL++SGSKDSTLKVW ++T+KL Q+LPGHADE
Sbjct: 402 WRASDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADE 461
Query: 474 VFAVDWSPDGEKVASGGKDRVLKLW 498
VF VDW+PDG +VASGGKD+V+KLW
Sbjct: 462 VFGVDWAPDGSRVASGGKDKVIKLW 486
Score = 232 (86.7 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 81/302 (26%), Positives = 128/302 (42%)
Query: 104 IAGHTEAVLSVAFSP-----DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
++GH + + +A+ P + R+LAS SGD R+WD+ + GH N V + W
Sbjct: 200 LSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKLGQCLMNIAGHTNAVTAVRW 259
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI--SWEPVHLNAPCRRFVSA 216
G + + SK ++ W G SGH W+ I S + V P
Sbjct: 260 GGAGL-IYTSSKDRTVKMWRAADGILC-RTFSGHAHWVNNIALSTDYVLRTGPFHPVKDR 317
Query: 217 SKD----GDARIWDVSLRKC-VICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
SK + + +L++ +C V+C S D T+ +W Q
Sbjct: 318 SKSHLSLSTEELQESALKRYQAVCPDEVESLVSC------------SDDNTLYLWRNNQN 365
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGA-FDHTGKQYSSPEEMKKAALERYNK----IKG 326
K + + GH + VN + S + L A FD + + + + + A + + +
Sbjct: 366 KCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAW 425
Query: 327 NAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
+A RL VSGS D T+ +W K + + GH V V ++PDG VAS DK IK
Sbjct: 426 SADSRLIVSGSKDSTLKVWSVQTKKLAQ-ELPGHADEVFGVDWAPDGSRVASGGKDKVIK 484
Query: 386 LW 387
LW
Sbjct: 485 LW 486
Score = 203 (76.5 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 47/128 (36%), Positives = 62/128 (48%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
N+C + GH V V +SPD + +AS S D +VRLW + M GH V +A
Sbjct: 365 NKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVA 424
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
WSAD + +VSGSK L+ W QT K L GH + G+ W P R S
Sbjct: 425 WSADSRLIVSGSKDSTLKVWSVQT-KKLAQELPGHADEVFGVDWAP-----DGSRVASGG 478
Query: 218 KDGDARIW 225
KD ++W
Sbjct: 479 KDKVIKLW 486
Score = 190 (71.9 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 79/300 (26%), Positives = 129/300 (43%)
Query: 231 KCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL 289
+C + GH AV + + DG + +GS D T+++W+ GH WV ++
Sbjct: 110 RCTSSMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSW 169
Query: 290 STE-YALRTGA-------FD-HTGKQYSSP-----EEMKKAALERYNKIKGNAPE--RLV 333
+ + L +G +D TG+Q P + + A E Y++ PE +L
Sbjct: 170 APDGKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHR----DPECRKLA 225
Query: 334 SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK 393
S S D +W+ + Q + GH V V + G + ++S D+++K+W G
Sbjct: 226 SASGDGDCRIWDVKLG-QCLMNIAGHTNAVTAVRWGGAGL-IYTSSKDRTVKMWRAADGI 283
Query: 394 FVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCC-MSLYSWSA-DSRL-------- 443
F GH V I Y R F+ V D S +SL + +S L
Sbjct: 284 LCRTFSGHAHWVNNIALSTDYVLR-TGPFHPVKDRSKSHLSLSTEELQESALKRYQAVCP 342
Query: 444 -----LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L+S S D+TL +W K + + GH + V V +SPD + +AS D+ ++LW
Sbjct: 343 DEVESLVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLW 402
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 881 (315.2 bits), Expect = 3.8e-112, Sum P(2) = 3.8e-112
Identities = 178/374 (47%), Positives = 232/374 (62%)
Query: 48 NEEKLPYAFYISDHELLVPLGSYLEKHKV--SVEKVLSIVYQPQAVFRIRPVNRCSATIA 105
N+E++ Y SD LG+ L +H + + E L++ +PQAVF+++ V+R + I
Sbjct: 96 NKEEIVIDSYPSD------LGALLRQHGIEDAFETTLTLAAEPQAVFKVQAVSRLAHRIP 149
Query: 106 GHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH 164
GH E +L FSP +LA+GSGD T R+WD T TP GH WVL ++WS DG
Sbjct: 150 GHGEPILCAQFSPASSARLATGSGDNTARIWDAETGTPKHTLKGHAGWVLGVSWSPDGTR 209
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL-NAPCRRFVSASKDGDAR 223
L + S ++ WDP+TGK G+ L GH KW+ GI+WEP+HL R VSASKD AR
Sbjct: 210 LATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFTAR 269
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWG---GDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
IW V+ + LSGH +V+CV+WG G GV+YT S D T+KVW+ +G L+ +LK H
Sbjct: 270 IWTVNTGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVWDAVKGTLLHDLKSH 329
Query: 281 GHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNK---IKGNAPERLVSGSD 337
HWVN LALST++ RTG FDHT ++ EE A ERY K + G ERLVS SD
Sbjct: 330 AHWVNHLALSTDFVCRTGFFDHTKTVPATAEEKTAKAKERYEKAARVGGKIVERLVSASD 389
Query: 338 DFTMFLWEPAVS-KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVA 396
DFTM+L++P +P RM GHQ+ VNHV FSPDG +ASA +D + KLWN GKF+
Sbjct: 390 DFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFSPDGSMIASAGWDNATKLWNARDGKFIN 449
Query: 397 VFRGHVGPVYQIRF 410
RGHV PVYQ F
Sbjct: 450 TLRGHVAPVYQCSF 463
Score = 248 (92.4 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 94/323 (29%), Positives = 139/323 (43%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPM-FKCTGHKNWVLCIAWSA- 160
T+ GH VL V++SPDG +LA+ S D TVR+WD T + + GH WV IAW
Sbjct: 190 TLKGHAGWVLGVSWSPDGTRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPL 249
Query: 161 ----DGK-HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
DG LVS SK + W TG+ + LSGHK ++ + W + +
Sbjct: 250 HLWRDGTPRLVSASKDFTARIWTVNTGRTE-HVLSGHKGSVSCVRWGAGNGTGVV---YT 305
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIR 275
AS D ++WD + L H V + D V TG D T V T + K +
Sbjct: 306 ASHDKTVKVWDAVKGTLLHDLKSHAHWVNHLALSTDFVCRTGFFDHTKTVPATAEEKTAK 365
Query: 276 ELKGH-------GHWVNSL-ALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGN 327
+ + G V L + S ++ + FD + P ++ N + +
Sbjct: 366 AKERYEKAARVGGKIVERLVSASDDFTMYL--FDPLNDG-TKPIARMIGHQKQVNHVTFS 422
Query: 328 APERLVS--GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
+++ G D+ T LW K T + GH V FS D + + +AS D ++K
Sbjct: 423 PDGSMIASAGWDNATK-LWNARDGKFINT-LRGHVAPVYQCSFSADSRLLVTASKDTTLK 480
Query: 386 LWNGTTGKFVAVFRGHVGPVYQI 408
+WN TGK GH VY +
Sbjct: 481 VWNVRTGKLATDLPGHEDEVYGV 503
Score = 246 (91.7 bits), Expect = 3.8e-112, Sum P(2) = 3.8e-112
Identities = 42/63 (66%), Positives = 55/63 (87%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
S+SADSRLL++ SKD+TLKVW++RT KL DLPGH DEV+ VDWSPDG++V SGG+D+ +
Sbjct: 462 SFSADSRLLVTASKDTTLKVWNVRTGKLATDLPGHEDEVYGVDWSPDGQRVGSGGRDKAV 521
Query: 496 KLW 498
+LW
Sbjct: 522 RLW 524
Score = 198 (74.8 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 81/303 (26%), Positives = 135/303 (44%)
Query: 104 IAGHTEAVLSVAFSP-----DGR-QLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
+ GH + V +A+ P DG +L S S D T R+W +NT +GHK V C+
Sbjct: 234 LKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFTARIWTVNTGRTEHVLSGHKGSVSCVR 293
Query: 158 WSA-DGKHLV-SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRR-FV 214
W A +G +V + S ++ WD G + L H W+ ++ + + CR F
Sbjct: 294 WGAGNGTGVVYTASHDKTVKVWDAVKGTLL-HDLKSHAHWVNHLA---LSTDFVCRTGFF 349
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV--IYTGSQDCTIKVWET-TQG 271
+K A + K + A + GG V + + S D T+ +++ G
Sbjct: 350 DHTKTVPA----TAEEKTAKAKERYEKAA---RVGGKIVERLVSASDDFTMYLFDPLNDG 402
Query: 272 -KLIRELKGHGHWVNSLALSTEYALRTGA-FDHTGKQYSSPE----EMKKAALERYNKIK 325
K I + GH VN + S + ++ A +D+ K +++ + + + +
Sbjct: 403 TKPIARMIGHQKQVNHVTFSPDGSMIASAGWDNATKLWNARDGKFINTLRGHVAPVYQCS 462
Query: 326 GNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+A RL V+ S D T+ +W K T + GH+ V V +SPDGQ V S DK++
Sbjct: 463 FSADSRLLVTASKDTTLKVWNVRTGKLA-TDLPGHEDEVYGVDWSPDGQRVGSGGRDKAV 521
Query: 385 KLW 387
+LW
Sbjct: 522 RLW 524
Score = 169 (64.5 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 47/151 (31%), Positives = 74/151 (49%)
Query: 78 VEKVLSIVYQPQAVFRIRPVNRCSATIA---GHTEAVLSVAFSPDGRQLASGSGDTTVRL 134
VE+++S ++ P+N + IA GH + V V FSPDG +AS D +L
Sbjct: 381 VERLVS-ASDDFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFSPDGSMIASAGWDNATKL 439
Query: 135 WDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKK 194
W+ + GH V ++SAD + LV+ SK L+ W+ +TGK + + L GH+
Sbjct: 440 WNARDGKFINTLRGHVAPVYQCSFSADSRLLVTASKDTTLKVWNVRTGKLATD-LPGHED 498
Query: 195 WITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+ G+ W P +R S +D R+W
Sbjct: 499 EVYGVDWSP-----DGQRVGSGGRDKAVRLW 524
Score = 138 (53.6 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 439 ADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
A S L +GS D+T ++WD T K L GHA V V WSPDG ++A+ D+ +++W
Sbjct: 163 ASSARLATGSGDNTARIWDAETGTPKHTLKGHAGWVLGVSWSPDGTRLATCSMDKTVRIW 222
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 1053 (375.7 bits), Expect = 1.9e-106, P = 1.9e-106
Identities = 199/412 (48%), Positives = 275/412 (66%)
Query: 5 TETTNNVMCLLTDPEGNPLGAPMYFPQNAGPQQLSQIVNKLL-NNEEKLPYAFYISDH-E 62
TE+ + +++ E G+ + P + +L + N+LL ++++ +P +F+ ++ E
Sbjct: 2 TESPQISVSFVSEDENELGGSGILVPVDISTNELQILCNQLLGSSDDPVPISFFTTEGAE 61
Query: 63 LLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQ 122
++ + LE+ + E L +VYQPQAVFR+RPV RCSA+I GH E V+S FSPDGR
Sbjct: 62 IVDSIRKSLEE--IDFETTLKLVYQPQAVFRVRPVTRCSASIPGHGEPVISAQFSPDGRG 119
Query: 123 LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTG 182
LASGSGD T+R+WD+ + P+ C HK+WVLCIAWS D + S K GE+ W+ +TG
Sbjct: 120 LASGSGDQTMRIWDIELELPLHTCKSHKSWVLCIAWSPDATKIASACKNGEICIWNAKTG 179
Query: 183 KPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLA 242
+ G L HK+WIT ++W+P+H + CR S KDG+ IWD V CLSGHT +
Sbjct: 180 EQIGKTLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGNIFIWDTVQGTVVRCLSGHTAS 239
Query: 243 VTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDH 302
VTC++WGG+G+IY+GSQD T+K+W G + R + GH HW+N+LAL+T+YALRT F+
Sbjct: 240 VTCLRWGGEGLIYSGSQDRTVKMWRADDGVMCRNMTGHAHWINTLALNTDYALRTSCFEP 299
Query: 303 TGKQYSSP---EEMKKAALERYN---KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
+ K+ P EE +K A RY +I G ERLVSGSDDFT+F+W P +KQ RM
Sbjct: 300 S-KRCIKPDTVEECQKVAQTRYEAALEIAGG--ERLVSGSDDFTLFMWNPKETKQSINRM 356
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
TGH QLVN V FSPD +++ASASFDKS+KLW G TGK++A RGHVGPVYQ+
Sbjct: 357 TGHMQLVNQVVFSPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQV 408
Score = 258 (95.9 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 64/143 (44%), Positives = 86/143 (60%)
Query: 372 GQWVASASFDKSIKLWNGT-TGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSC 430
G+ + S S D ++ +WN T + + GH+ V Q+ F + ++F V + C
Sbjct: 329 GERLVSGSDDFTLFMWNPKETKQSINRMTGHMQLVNQVVFSPDTRYIASASFDKSVKLWC 388
Query: 431 ------CMSL-------Y--SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVF 475
SL Y +WSADSRLL+SGS DSTLKV++++T+ L DLPGH DEVF
Sbjct: 389 GRTGKYLASLRGHVGPVYQVAWSADSRLLVSGSADSTLKVFELKTKSLYYDLPGHGDEVF 448
Query: 476 AVDWSPDGEKVASGGKDRVLKLW 498
VDWSP+G KV SGGKD+VLKLW
Sbjct: 449 TVDWSPEGTKVVSGGKDKVLKLW 471
Score = 216 (81.1 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 83/300 (27%), Positives = 138/300 (46%)
Query: 103 TIAGHTEAVLSVAFSP---DG--RQLASGSGDTTVRLWDLNTQTPMFKC-TGHKNWVLCI 156
T+ H + + S+A+ P D R LAS D + +WD Q + +C +GH V C+
Sbjct: 185 TLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGNIFIWD-TVQGTVVRCLSGHTASVTCL 243
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
W +G + SGS+ ++ W G N ++GH WI ++ LN S
Sbjct: 244 RWGGEGL-IYSGSQDRTVKMWRADDGVMCRN-MTGHAHWINTLA-----LNTDYALRTSC 296
Query: 217 SKDGDARIWDVSLRKCV-ICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKL-I 274
+ I ++ +C + + + A+ GG+ ++ +GS D T+ +W + K I
Sbjct: 297 FEPSKRCIKPDTVEECQKVAQTRYEAALEIA--GGERLV-SGSDDFTLFMWNPKETKQSI 353
Query: 275 RELKGHGHWVNSLALS--TEYALRTGAFDHTGKQYSSPEEMKKAALERY----NKIKGNA 328
+ GH VN + S T Y + + +FD + K + A+L + ++ +A
Sbjct: 354 NRMTGHMQLVNQVVFSPDTRY-IASASFDKSVKLWCGRTGKYLASLRGHVGPVYQVAWSA 412
Query: 329 PERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
RL VSGS D T+ ++E +K + GH V V +SP+G V S DK +KLW
Sbjct: 413 DSRLLVSGSADSTLKVFE-LKTKSLYYDLPGHGDEVFTVDWSPEGTKVVSGGKDKVLKLW 471
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 77/325 (23%), Positives = 136/325 (41%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTG-HKNWVLCIAWSAD 161
T H VL +A+SPD ++AS + + +W+ T + K HK W+ +AW
Sbjct: 142 TCKSHKSWVLCIAWSPDATKIASACKNGEICIWNAKTGEQIGKTLKRHKQWITSLAWQPM 201
Query: 162 GKH-----LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
K L S K G + WD G LSGH +T + W L S
Sbjct: 202 HKDPTCRLLASCGKDGNIFIWDTVQGTVV-RCLSGHTASVTCLRWGGEGL------IYSG 254
Query: 217 SKDGDARIWDVSLRKCVIC--LSGHTLAVTCVKWGGDGVIYTG----SQDCTIKVWETTQ 270
S+D ++W V+C ++GH + + D + T S+ C IK +
Sbjct: 255 SQDRTVKMWRAD--DGVMCRNMTGHAHWINTLALNTDYALRTSCFEPSKRC-IKPDTVEE 311
Query: 271 GKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAA------LERYNKI 324
+ + + + + +L ++ L +G+ D T ++ P+E K++ ++ N++
Sbjct: 312 CQKVAQTR----YEAALEIAGGERLVSGSDDFTLFMWN-PKETKQSINRMTGHMQLVNQV 366
Query: 325 KGNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKS 383
+ R + S S D ++ LW K + + GH V V +S D + + S S D +
Sbjct: 367 VFSPDTRYIASASFDKSVKLWCGRTGKYLAS-LRGHVGPVYQVAWSADSRLLVSGSADST 425
Query: 384 IKLWNGTTGKFVAVFRGHVGPVYQI 408
+K++ T GH V+ +
Sbjct: 426 LKVFELKTKSLYYDLPGHGDEVFTV 450
Score = 148 (57.2 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
A++ GH V VA+S D R L SGS D+T+++++L T++ + GH + V + WS +
Sbjct: 396 ASLRGHVGPVYQVAWSADSRLLVSGSADSTLKVFELKTKSLYYDLPGHGDEVFTVDWSPE 455
Query: 162 GKHLVSGSKAGELQCW 177
G +VSG K L+ W
Sbjct: 456 GTKVVSGGKDKVLKLW 471
Score = 135 (52.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 45/182 (24%), Positives = 79/182 (43%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L S D +F+W+ + ++GH V + + +G + S S D+++K+W
Sbjct: 210 LASCGKDGNIFIWDTVQGTVVRC-LSGHTASVTCLRWGGEGL-IYSGSQDRTVKMWRADD 267
Query: 392 GKFVAVFRGHVGPVYQIRFELIYCFR---YPSNFYCVVDMSC--CMSLYSWSADSRL--- 443
G GH + + Y R + + C+ + C + ++ L
Sbjct: 268 GVMCRNMTGHAHWINTLALNTDYALRTSCFEPSKRCIKPDTVEECQKVAQTRYEAALEIA 327
Query: 444 ----LLSGSKDSTLKVWDIR-TQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L+SGS D TL +W+ + T++ + GH V V +SPD +AS D+ +KLW
Sbjct: 328 GGERLVSGSDDFTLFMWNPKETKQSINRMTGHMQLVNQVVFSPDTRYIASASFDKSVKLW 387
Query: 499 MG 500
G
Sbjct: 388 CG 389
Score = 119 (46.9 bits), Expect = 0.00057, P = 0.00057
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+S D R L SGS D T+++WDI + H V + WSPD K+AS K+ +
Sbjct: 113 FSPDGRGLASGSGDQTMRIWDIELELPLHTCKSHKSWVLCIAWSPDATKIASACKNGEIC 172
Query: 497 LW 498
+W
Sbjct: 173 IW 174
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 1044 (372.6 bits), Expect = 1.7e-105, P = 1.7e-105
Identities = 196/402 (48%), Positives = 269/402 (66%)
Query: 77 SVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPD-GRQLASGSGDTTVRLW 135
S E ++++Y P+AVF+++PV R S+ IAGH +L AF+P ++ +G+GD T R+W
Sbjct: 112 STEDQITLLYTPRAVFKVKPVTRSSSAIAGHGSTILCSAFAPHTSSRMVTGAGDNTARIW 171
Query: 136 DLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKW 195
D +TQTPM GH NWVLC++WS DG+ + +GS ++ WDP++G+ G+ L GH KW
Sbjct: 172 DCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKW 231
Query: 196 ITGISWEPVHLNAPCR--RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV 253
IT +SWEP+HL P R S+SKDG +IWD R C +SGHT +V+CVKWGG G+
Sbjct: 232 ITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQGL 291
Query: 254 IYTGSQDCTIKVWE-TTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
+Y+GS D T++VW+ +QG+ I LK H HWVN L+LST+YALR GAFDHTGK+ S+PEE
Sbjct: 292 LYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKPSTPEE 351
Query: 313 MKKAALERYNKI---KGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFS 369
+K ALE Y KI GN+ E +V+ SDD+TMFLW P S +P RMTGHQ+LVNHV FS
Sbjct: 352 AQKKALENYEKICKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFS 411
Query: 370 PDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----LIYCFRYPS-NFY 423
PDG+++ SASFD SIKLW+G GKF++ FRGHV VYQ+ + L+ C + + +
Sbjct: 412 PDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVW 471
Query: 424 CVVDMSCCMSL-------YS--WSADSRLLLSGSKDSTLKVW 456
V + L Y+ WS D + + SG KD +++W
Sbjct: 472 DVRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 562 (202.9 bits), Expect = 1.1e-78, Sum P(2) = 1.1e-78
Identities = 106/264 (40%), Positives = 162/264 (61%)
Query: 20 GNPLGAPMYFPQNAGPQQLSQIVNKLLN-NEEKLPYAFYI-------SDHELLVPLGSYL 71
G+ +G + P +QL +++N+L +++ +PY F SD + + L
Sbjct: 42 GDNVGGALRVPGAISEKQLEELLNQLNGTSDDPVPYTFSCTIQGKKASDPVKTIDITDNL 101
Query: 72 EKHKV-----SVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPD-GRQLAS 125
+ S E ++++Y P+AVF+++PV R S+ IAGH +L AF+P ++ +
Sbjct: 102 YSSLIKPGYNSTEDQITLLYTPRAVFKVKPVTRSSSAIAGHGSTILCSAFAPHTSSRMVT 161
Query: 126 GSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPS 185
G+GD T R+WD +TQTPM GH NWVLC++WS DG+ + +GS ++ WDP++G+
Sbjct: 162 GAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCL 221
Query: 186 GNPLSGHKKWITGISWEPVHLNAPCR--RFVSASKDGDARIWDVSLRKCVICLSGHTLAV 243
G+ L GH KWIT +SWEP+HL P R S+SKDG +IWD R C +SGHT +V
Sbjct: 222 GDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSV 281
Query: 244 TCVKWGGDGVIYTGSQDCTIKVWE 267
+CVKWGG G++Y+GS D T++VW+
Sbjct: 282 SCVKWGGQGLLYSGSHDRTVRVWD 305
Score = 248 (92.4 bits), Expect = 1.1e-78, Sum P(2) = 1.1e-78
Identities = 44/68 (64%), Positives = 58/68 (85%)
Query: 433 SLY--SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 490
S+Y +WS+D RLL+S SKD+TLKVWD+RT+KL DLPGH DEV+ VDWS DG++V SGG
Sbjct: 446 SVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGG 505
Query: 491 KDRVLKLW 498
KD++++LW
Sbjct: 506 KDKMVRLW 513
Score = 212 (79.7 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 80/304 (26%), Positives = 134/304 (44%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQ 270
R V+ + D ARIWD + + L GH V CV W DG VI TGS D TI++W+
Sbjct: 158 RMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKS 217
Query: 271 GKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPE 330
G+ + + GH +LS E P + K G+ P
Sbjct: 218 GQCLGDAL-RGHSKWITSLSWE-----------------PIHLVKP---------GSKP- 249
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN-G 389
RL S S D T+ +W+ VS+ + M+GH V+ V + G + S S D+++++W+
Sbjct: 250 RLASSSKDGTIKIWD-TVSRVCQYTMSGHTNSVSCVKWGGQGL-LYSGSHDRTVRVWDIN 307
Query: 390 TTGKFVAVFRGHVGPVYQIRFELIYCFR-----YPSNFYCVVDMSCCMSLYSWSA----- 439
+ G+ + + + H V + Y R + + + +L ++
Sbjct: 308 SQGRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKPSTPEEAQKKALENYEKICKKN 367
Query: 440 --DSRLLLSGSKDSTLKVWD-IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
++++ S D T+ +W+ +++ K + GH V V +SPDG + S D +K
Sbjct: 368 GNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIK 427
Query: 497 LWMG 500
LW G
Sbjct: 428 LWDG 431
Score = 141 (54.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 433 SLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKD 492
S ++ SR++ +G+ D+T ++WD TQ L GH + V V WSPDGE +A+G D
Sbjct: 149 SAFAPHTSSRMV-TGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMD 207
Query: 493 RVLKLW 498
++LW
Sbjct: 208 NTIRLW 213
Score = 121 (47.7 bits), Expect = 2.6e-65, Sum P(2) = 2.6e-65
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
++S D R ++S S D+++K+WD R K GH V+ V WS D + S KD L
Sbjct: 409 AFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTL 468
Query: 496 KLW 498
K+W
Sbjct: 469 KVW 471
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 922 (329.6 bits), Expect = 1.5e-92, P = 1.5e-92
Identities = 202/467 (43%), Positives = 270/467 (57%)
Query: 20 GNPLGAPMYFP-QNAGPQQLSQIVNKLLNNEE--KLPYAF-YISDH---------ELLVP 66
G+ G + P +A + L ++N L NEE ++PY F + SD ++L
Sbjct: 46 GSATGPAVSVPVADATVKNLETLLNTLQGNEEDERVPYRFTFQSDDKDSKDSQTIDILAD 105
Query: 67 LGSYLEKHKV-SVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSP-DGRQLA 124
+ L K V + E + + + PQA+FR++ V+RCSA+IAGH EA+L+ +FSP +
Sbjct: 106 IYHSLLKPGVKTTEDTIQLYFTPQAIFRVKAVSRCSASIAGHGEAILATSFSPVSSSTMV 165
Query: 125 SGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKP 184
SGSGD+T R+WD +T TP+ GH +WVL +++S +G + +GS ++ WD + G+
Sbjct: 166 SGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQA 225
Query: 185 SGNPLSGHKKWITGISWEPVHLNAPCR-RFVSASKDGDARIWDVSLRKCVICLSGHTLAV 243
G PL GH KWIT ++WEP HL R SASKD RIWDV ++ I LSGH +V
Sbjct: 226 LGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKRADIVLSGHKGSV 285
Query: 244 TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHT 303
TCV+WGG G IYT S D TIKVW + G LI+ L H H VN LALST++ LRT DHT
Sbjct: 286 TCVRWGGTGKIYTSSHDRTIKVWNSQTGTLIQTLSAHAHRVNHLALSTDFILRTAYHDHT 345
Query: 304 GKQYSSPEEMKKAALERYNK---IKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQ 360
GK S + A +R+ K I E+LVS SDDFTM+LW+P S +P R+ GHQ
Sbjct: 346 GKVPESDADKVAMAKKRFEKAATINNKIVEKLVSASDDFTMYLWDPESSSKPVARLLGHQ 405
Query: 361 QLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPS 420
+ VNHV FSPD ++ASA FD +KLWNG GKF+ RGHVG VYQ CF S
Sbjct: 406 KEVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQC------CFSADS 459
Query: 421 NFYCVVDMSCCMSLYSWSADSRLL---LSGSKDSTLKV-WDIRTQKL 463
+V S +L W+ + L L G KD V W QK+
Sbjct: 460 RL--LVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPDGQKV 504
Score = 262 (97.3 bits), Expect = 8.9e-20, P = 8.9e-20
Identities = 47/69 (68%), Positives = 58/69 (84%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
CC +SADSRLL+S SKD+TLKVW++RT KL +DLPGH DEVFAVDWSPDG+KV SG
Sbjct: 453 CC-----FSADSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPDGQKVGSG 507
Query: 490 GKDRVLKLW 498
GKD+ +++W
Sbjct: 508 GKDKAIRIW 516
Score = 228 (85.3 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 83/301 (27%), Positives = 137/301 (45%)
Query: 102 ATIAGHTEAVLSVAFSP-----DGR-QLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
A + GH + + S+A+ P G +LAS S D+TVR+WD+ ++ +GHK V C
Sbjct: 228 APLKGHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKRADIVLSGHKGSVTC 287
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV- 214
+ W GK + + S ++ W+ QTG LS H + HL A F+
Sbjct: 288 VRWGGTGK-IYTSSHDRTIKVWNSQTGTLI-QTLSAHAHRVN-------HL-ALSTDFIL 337
Query: 215 -SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWET-TQGK 272
+A D ++ + K + A T + ++ + S D T+ +W+ + K
Sbjct: 338 RTAYHDHTGKVPESDADKVAMAKKRFEKAATINNKIVEKLV-SASDDFTMYLWDPESSSK 396
Query: 273 LIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERY----NKIKGN 327
+ L GH VN + S + A + + FD+ K ++ + L + + +
Sbjct: 397 PVARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFS 456
Query: 328 APERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
A RL VS S D T+ +W K + + GH+ V V +SPDGQ V S DK+I++
Sbjct: 457 ADSRLLVSSSKDTTLKVWNVRTGKLSED-LPGHKDEVFAVDWSPDGQKVGSGGKDKAIRI 515
Query: 387 W 387
W
Sbjct: 516 W 516
Score = 174 (66.3 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 57/197 (28%), Positives = 95/197 (48%)
Query: 317 ALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVA 376
A E Y+ + P RL S S D T+ +W+ +SK+ ++GH+ V V + G+ +
Sbjct: 241 AWEPYHLQQSGHP-RLASASKDSTVRIWD-VISKRADIVLSGHKGSVTCVRWGGTGK-IY 297
Query: 377 SASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFR--YPSNFYCVVD-----MS 429
++S D++IK+WN TG + H V + + R Y + V + ++
Sbjct: 298 TSSHDRTIKVWNSQTGTLIQTLSAHAHRVNHLALSTDFILRTAYHDHTGKVPESDADKVA 357
Query: 430 CCMSLYSWSA--DSRL---LLSGSKDSTLKVWDIRTQ-KLKQDLPGHADEVFAVDWSPDG 483
+ +A ++++ L+S S D T+ +WD + K L GH EV V +SPD
Sbjct: 358 MAKKRFEKAATINNKIVEKLVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDM 417
Query: 484 EKVASGGKDRVLKLWMG 500
+AS G D +KLW G
Sbjct: 418 AYIASAGFDNHVKLWNG 434
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 441 SRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
S ++SGS DST ++WD T L GH V AV +SP+G +A+G D +++W
Sbjct: 161 SSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIW 218
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 917 (327.9 bits), Expect = 5.0e-92, P = 5.0e-92
Identities = 198/485 (40%), Positives = 282/485 (58%)
Query: 10 NVMCLLTDPEGNPLGAPMYFPQNAGPQQLSQIVNKLL-NNEEKLPYAFYISDHELLVPLG 68
NV +D + N L A + P N+ +QL ++N+LL N+++ +PY F + + + +
Sbjct: 32 NVQFRASD-DSNEL-ASLLVPGNSSVRQLEALLNQLLENSDDPVPYNFALHHEDETIEIQ 89
Query: 69 SYLEK---HK--VSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPD-GRQ 122
L H + E L+++Y PQAVFR+R V RC+A++ GH ++S FSP +
Sbjct: 90 DNLYTSVFHNGLMKTEDHLTLLYTPQAVFRVRAVTRCTASMNGHDGTIISAQFSPSTSSR 149
Query: 123 LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTG 182
L +GSGD T RLWD +TQTP+ GH NWV C+AW+ D + +GS ++ WDP+ G
Sbjct: 150 LVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKG 209
Query: 183 KPSGNPLSGHKKWITGISWEPVHLNAPCRRFV--SASKDGDARIWDVSLRKCVICLSGHT 240
P G+ L H K I + W+P+HL ++ S SKD RIW+V LR + LSGHT
Sbjct: 210 SPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHT 269
Query: 241 LAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF 300
+TCV+WGG IY+ S D TI++W+ GK + LKGH VN L+LSTE+ LR+GA+
Sbjct: 270 APITCVRWGGQNWIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLSTEHVLRSGAY 329
Query: 301 DHTG-KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGH 359
DHT K S +E +KA ERY + ERLVS SDD + LW+P S +P T+M GH
Sbjct: 330 DHTDFKPKSFSDERRKAK-ERYEACLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGH 388
Query: 360 QQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYP 419
Q++VNH FSPDG+ +A+ASFD S++LW+G TGKF+A RGHV VYQ C +
Sbjct: 389 QKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQ-------C-AWS 440
Query: 420 SNFYCVVDMSCCMSLYSWSADSRLL---LSGSKDSTLKV-WDIRTQKLKQDLPGHADEVF 475
++ +V S +L W S+ + L G +D V W Q++ G AD+
Sbjct: 441 TDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVAS---GGADKAV 497
Query: 476 AVDWS 480
+ WS
Sbjct: 498 RI-WS 501
Score = 288 (106.4 bits), Expect = 8.1e-23, P = 8.1e-23
Identities = 79/269 (29%), Positives = 131/269 (48%)
Query: 250 GDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSS 309
G ++ +GS+D T+++W L+ L GH + + + + + ++D T + + +
Sbjct: 238 GPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQNWIYSSSYDKTIRIWDA 297
Query: 310 PE----EMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNH 365
+ + K R N + + L SG+ D T F +P + + +
Sbjct: 298 KDGKCLHILKGHAARVNHLSLSTEHVLRSGAYDHTDF--KPKSFSDERRKAKERYEAC-- 353
Query: 366 VYFSPDGQWVASASFDKSIKLWNGTTG-KFVAVFRGHVGPVYQIRFE----LIYCFRYPS 420
G+ + SAS D + LW+ K + GH V F I + S
Sbjct: 354 --LKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDS 411
Query: 421 NF---------YCVVDMSCCMSLY--SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPG 469
+ + ++Y +WS DSRLL+S S+D+TLKVWD+R++K+K DLPG
Sbjct: 412 SVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPG 471
Query: 470 HADEVFAVDWSPDGEKVASGGKDRVLKLW 498
H D+VFAVDWSPDG++VASGG D+ +++W
Sbjct: 472 HEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 120 (47.3 bits), Expect = 0.00049, P = 0.00049
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 435 YSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
+S S SRL+ +GS D T ++WD TQ + GH + V V W+PD +A+G D
Sbjct: 142 FSPSTSSRLV-TGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNT 200
Query: 495 LKLW 498
++ W
Sbjct: 201 IRFW 204
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 526 (190.2 bits), Expect = 2.6e-49, P = 2.6e-49
Identities = 135/418 (32%), Positives = 217/418 (51%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T GH ++ SVAF+PDG++LAS S D+T+++WDL T H V +A+S DG
Sbjct: 829 TFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDG 888
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L S S ++ W+P TG+ + L G W+ +++ P ++ S S+
Sbjct: 889 KLLASSSLDSTIKVWNPATGELQQS-LEGRSGWVKSVAFSP-----DGKKLASGSEKNTV 942
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHG 281
++W+ + + + L GH+ +V V + DG + + S D TIK+W +T G+L + KGH
Sbjct: 943 KLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHD 1002
Query: 282 HWVNSLALSTEYA-LRTGAFDHTGKQYS-SPEEMKKAALERYNKIKGNA--PE--RLVSG 335
W+ ++A S + L +G+ D+T K + + E++++ + + A P+ +L S
Sbjct: 1003 LWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASS 1062
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
S D T+ LW+ A + +T + GH Q V V FSPDG+ +AS S+D +IKLWN TG+
Sbjct: 1063 SLDSTIKLWDSATGELQRT-LEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQ 1121
Query: 396 AVFRGHVGPVYQIRF----ELIYCFRYPSNFY----CVVDMSCCMSLYS-------WSAD 440
G V + F + + Y S ++ + +S +S D
Sbjct: 1122 QTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPD 1181
Query: 441 SRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+LL SGS D T K+WD T +L Q GH+ V +V +SPDG+ +AS +KLW
Sbjct: 1182 GKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLW 1239
Score = 488 (176.8 bits), Expect = 3.0e-45, P = 3.0e-45
Identities = 137/418 (32%), Positives = 206/418 (49%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ H V SV FSPDG+QL SGS D TV++WD T + GH V +A+S DG
Sbjct: 745 TLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDG 804
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L SGS + WD TG+ GH I +++ P + SAS D
Sbjct: 805 KLLASGSYDNTIDLWDSATGELL-QTFEGHPHSIWSVAFAP-----DGKELASASDDSTI 858
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHG 281
+IWD++ + L H+ +V V + DG ++ + S D TIKVW G+L + L+G
Sbjct: 859 KIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRS 918
Query: 282 HWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNK-IKGNA--PE--RLVSG 335
WV S+A S + L +G+ +T K ++ LE +++ ++ A P+ +L S
Sbjct: 919 GWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASS 978
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
S D T+ LW + +T GH + V FSPDG+ + S S D +IKLW+ T +
Sbjct: 979 SSDTTIKLWNSTTGELQQT-FKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQ 1037
Query: 396 AVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDM--SCCMSLY-------------SWSAD 440
H V+ + F S+ + + S L ++S D
Sbjct: 1038 QSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPD 1097
Query: 441 SRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+LL S S D T+K+W+ T +L+Q L G +D V +V +SPDG+++ASG D +KLW
Sbjct: 1098 GKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLW 1155
Score = 469 (170.2 bits), Expect = 3.2e-43, P = 3.2e-43
Identities = 125/408 (30%), Positives = 208/408 (50%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ H+++V SVAFSPDG+ LAS S D+T+++W+ T G WV +A+S DG
Sbjct: 871 TLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDG 930
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L SGS+ ++ W+P TG+ L GH + + +++ P ++ S+S D
Sbjct: 931 KKLASGSEKNTVKLWNPATGELL-QTLEGHSQSVRSVAFSP-----DGKQLASSSSDTTI 984
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHG 281
++W+ + + GH L + V + DG + +GS D TIK+W+ +L + L+ H
Sbjct: 985 KLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHS 1044
Query: 282 HWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNK-IKGN--APER--LVSG 335
V+++A S + L + + D T K + S + LE +++ ++ +P+ L S
Sbjct: 1045 RSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASN 1104
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
S D T+ LW P + +T +TG V+ V FSPDG+ +AS +D +IKLW+ TG+ +
Sbjct: 1105 SYDGTIKLWNPLTGELQQT-LTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELL 1163
Query: 396 AVFRGHVGPVYQIRF----ELIYCFRY--------PSN---FYCVVDMSCCMSLYSWSAD 440
GH + + F +L+ Y P+ S + ++S D
Sbjct: 1164 QTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPD 1223
Query: 441 SRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVAS 488
+LL S S T+K+WD T +L Q L + +V +SPDG ++AS
Sbjct: 1224 GKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLAS 1271
Score = 264 (98.0 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 60/183 (32%), Positives = 96/183 (52%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ G ++ V SVAFSPDG+QLASG D+T++LWD T + GH + + + +S DG
Sbjct: 1123 TLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDG 1182
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L SGS + WDP TG+ GH KW+ +++ +P + +++S G+
Sbjct: 1183 KLLASGSYDQTAKLWDPATGELL-QIFEGHSKWVESVAF------SPDGKLLASSSYGET 1235
Query: 223 -RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHG 281
++WD + + L+ + V + DG K+W+ G+L++ LKGH
Sbjct: 1236 IKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFDTKIWDPATGELLQALKGHS 1295
Query: 282 HWV 284
WV
Sbjct: 1296 KWV 1298
Score = 165 (63.1 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 53/173 (30%), Positives = 82/173 (47%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
++L SG D T+ LW+ A + +T + GH + V FSPDG+ +AS S+D++ KLW+
Sbjct: 1141 KQLASGYYDSTIKLWDSATGELLQT-LEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDP 1199
Query: 390 TTGKFVAVFRGHVGPVYQIRF----ELIYCFRYPSNF--YCVVDMSCCMSL--------- 434
TG+ + +F GH V + F +L+ Y + V +L
Sbjct: 1200 ATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGS 1259
Query: 435 YSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 487
++S D L S T K+WD T +L Q L GH+ V WS G ++
Sbjct: 1260 VAFSPDGNRLASVDIFDT-KIWDPATGELLQALKGHSKWV----WSRTGAGIS 1307
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 98/297 (32%), Positives = 152/297 (51%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH++ + +V FSPDGR LASGS DTT++LWD + GH + V +A+S +G
Sbjct: 36 TLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNG 95
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ L SGS ++ W+ + + + GH + +++ P +
Sbjct: 96 QLLASGSSDTTIKLWNSASDSLK-HTMEGHSDRVESVAFSP-----------------NG 137
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHG 281
++W+ ++ + GH+ V V + DG ++ +GS + TIK+W++ L L GH
Sbjct: 138 QLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHS 197
Query: 282 HWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERY-NKIKGNA--P--ERLVSG 335
+WV L S + L +G+ D T K + P K LE + NKI+ A P + L SG
Sbjct: 198 NWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASG 257
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
S D T+ LW+ A T + GH +V V FSPD Q + S S D +IKLW+ TG
Sbjct: 258 SSDATIKLWDTATGSFRHT-LKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPATG 313
Score = 318 (117.0 bits), Expect = 6.0e-28, P = 6.0e-28
Identities = 87/248 (35%), Positives = 123/248 (49%)
Query: 79 EKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLN 138
++V S+ + P + TI GH++ VLSVAFSPDG+ LASGS + T++LWD
Sbjct: 126 DRVESVAFSPNGQLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSA 185
Query: 139 TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG 198
T GH NWVL + +S DG+ L SGS ++ WDP +G + L GH I
Sbjct: 186 TCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLK-HTLEGHSNKIES 244
Query: 199 ISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTG 257
+++ P N + S S D ++WD + L GH+ V V + D ++ +G
Sbjct: 245 LAFSP---NG--QLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESG 299
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRT--GAFD----HTGKQYSSP 310
S D TIK+W+ G L ++ G V S+ S E L T G F HTG Y S
Sbjct: 300 SGDNTIKLWDPATGILKHSMRTPGI-VRSIEFSIELPQLITNLGTFSIQAWHTG--YPSR 356
Query: 311 EEMKKAAL 318
KK A+
Sbjct: 357 SSGKKTAV 364
Score = 282 (104.3 bits), Expect = 1.7e-22, P = 1.7e-22
Identities = 79/269 (29%), Positives = 127/269 (47%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLN 207
GH +W+ + +S DG+ L SGS ++ WDP +G L GH + +++ P N
Sbjct: 39 GHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLK-QTLEGHSSSVQSVAFSP---N 94
Query: 208 APCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWE 267
+ S S D ++W+ + + GH+ V V + +G ++W
Sbjct: 95 G--QLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNG-----------QLWN 141
Query: 268 TTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNK--- 323
G L ++GH WV S+A S + L +G+ + T K + S K L ++
Sbjct: 142 PAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVL 201
Query: 324 -IKGNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
+ + RL+ SGS+D T+ LW+P S K + GH + + FSP+GQ +AS S D
Sbjct: 202 PLVFSPDGRLLASGSNDATIKLWDPP-SGSLKHTLEGHSNKIESLAFSPNGQLLASGSSD 260
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+IKLW+ TG F +GH V + F
Sbjct: 261 ATIKLWDTATGSFRHTLKGHSDMVLSVVF 289
Score = 271 (100.5 bits), Expect = 3.7e-21, P = 3.7e-21
Identities = 65/170 (38%), Positives = 91/170 (53%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L SGS+D T+ LW+PA S K + GH V V FSP+GQ +AS S D +IKLWN +
Sbjct: 56 LASGSNDTTIKLWDPA-SGGLKQTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSAS 114
Query: 392 GKFVAVFRGHVGPVYQIRFE---LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGS 448
GH V + F ++ S + + S + ++S D +LL SGS
Sbjct: 115 DSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGS 174
Query: 449 KDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+ T+K+WD T LK L GH++ V + +SPDG +ASG D +KLW
Sbjct: 175 AEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLW 224
Score = 258 (95.9 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 89/317 (28%), Positives = 142/317 (44%)
Query: 184 PSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV 243
P L GH WI +++ P R S S D ++WD + L GH+ +V
Sbjct: 32 PELQTLEGHSDWIETVTFSP-----DGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSV 86
Query: 244 TCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL---RTGA 299
V + +G ++ +GS D TIK+W + L ++GH V S+A S L G+
Sbjct: 87 QSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGS 146
Query: 300 FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGH 359
HT + +S + + A ++ L SGS + T+ LW+ A T + GH
Sbjct: 147 LKHTIEGHS--DWVLSVAFSPDGQL-------LASGSAEKTIKLWDSATCGLKHT-LGGH 196
Query: 360 QQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF----ELIYC 415
V + FSPDG+ +AS S D +IKLW+ +G GH + + F +L+
Sbjct: 197 SNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLAS 256
Query: 416 FRYPSNF-----------YCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLK 464
+ + + S + +S DS+LL SGS D+T+K+WD T LK
Sbjct: 257 GSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPATGILK 316
Query: 465 QDL--PGHADEV-FAVD 478
+ PG + F+++
Sbjct: 317 HSMRTPGIVRSIEFSIE 333
Score = 177 (67.4 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 47/153 (30%), Positives = 73/153 (47%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYC 415
+ GH + V FSPDG+ +AS S D +IKLW+ +G GH V + F
Sbjct: 37 LEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFS---- 92
Query: 416 FRYPSNFYCVVDMS-CCMSLYSWSADS-RLLLSGSKDSTLKV--------WDIRTQKLKQ 465
P+ S + L++ ++DS + + G D V W+ LK
Sbjct: 93 ---PNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKH 149
Query: 466 DLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+ GH+D V +V +SPDG+ +ASG ++ +KLW
Sbjct: 150 TIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLW 182
Score = 156 (60.0 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 28/62 (45%), Positives = 44/62 (70%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+S D RLL SGS D+T+K+WD + LK L GH++++ ++ +SP+G+ +ASG D +K
Sbjct: 205 FSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIK 264
Query: 497 LW 498
LW
Sbjct: 265 LW 266
Score = 149 (57.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 27/63 (42%), Positives = 41/63 (65%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
++S + +LL SGS D+T+K+WD T + L GH+D V +V +SPD + + SG D +
Sbjct: 246 AFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTI 305
Query: 496 KLW 498
KLW
Sbjct: 306 KLW 308
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 374 (136.7 bits), Expect = 7.1e-33, P = 7.1e-33
Identities = 115/385 (29%), Positives = 169/385 (43%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
A GH AV SV+FS D R LAS SGD TV++WD T GH WV + +S D
Sbjct: 257 AQFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHD 316
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ L S S G ++ WD TG L GH + + + H R S S D
Sbjct: 317 SRLLASASDDGTVKIWDTATGTLQ-RMLKGHNDSVRSVVFS--H---DSRLIASGSNDRT 370
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
RIW+ + H +V V + D + + S +K+W+T G L L+GH
Sbjct: 371 VRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGH 430
Query: 281 GHWVNSLALSTEYALRTGAFD-HTGKQYSSPEEMKKAALERYN----KIKGNAPERLV-S 334
VNS++ S + L A D T K + + + LE +N + + RL+ S
Sbjct: 431 DDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIAS 490
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF 394
SDD T+ +W+ A + + H V V FS D + +ASAS D ++K+W+ TG
Sbjct: 491 ASDDMTVKIWDTATVPL-QNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSL 549
Query: 395 VAVFRGHVGPVYQIRFE----LIYCFRYPSN---FYCVV-------DMSCCMSL-YSWSA 439
GH V + F L+ +Y D S +++ ++S
Sbjct: 550 ENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSH 609
Query: 440 DSRLLLSGSKDSTLKVWDIRTQKLK 464
S LL S D T+K+WD+ L+
Sbjct: 610 TSNLLASAMDDGTVKIWDMEIYSLR 634
Score = 219 (82.2 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 59/182 (32%), Positives = 86/182 (47%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L S SDD T+ +W+ A + + GH V V FS D + +AS S D+++++W TT
Sbjct: 320 LASASDDGTVKIWDTATGTLQRM-LKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTT 378
Query: 392 GKFVAVFRGHVGPVYQIRFE---------------LIYCFRYPSNFYCVVDMSCCMSLYS 436
G F H V + F I+ R S + C++ S
Sbjct: 379 GLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVS 438
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+S DSRLL S S D T+K+W T L++ L GH D V +V +S D +AS D +K
Sbjct: 439 FSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVK 498
Query: 497 LW 498
+W
Sbjct: 499 IW 500
Score = 169 (64.5 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 52/166 (31%), Positives = 76/166 (45%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
+SG + ++ A+ P + GH + V V FS D + +ASAS D ++K+W+ T
Sbjct: 237 ISGIKCAPLQVYASALLFSP-AQFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATS 295
Query: 393 KFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDST 452
GH V + F S DSRLL S S D T
Sbjct: 296 FLQNTLEGHNEWVKSVVF---------------------------SHDSRLLASASDDGT 328
Query: 453 LKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+K+WD T L++ L GH D V +V +S D +ASG DR +++W
Sbjct: 329 VKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIW 374
Score = 147 (56.8 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 29/62 (46%), Positives = 38/62 (61%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+S DSRLL S S D T+K+WD T L+ L GH D V +V +SPD +AS D +K
Sbjct: 523 FSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVK 582
Query: 497 LW 498
+W
Sbjct: 583 IW 584
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 95/302 (31%), Positives = 161/302 (53%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT--GHKNWVLCIAWSA 160
T+ GH +++ SV FSPDG+ LAS S D T+++W F+ T GHK + IAWS
Sbjct: 41 TLKGHLKSISSVKFSPDGKWLASASADKTIKIW--GAYDGKFERTLEGHKEGISDIAWSQ 98
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
D K + S S ++ WD ++GK L GHK+++ G+S+ P N VS S D
Sbjct: 99 DSKLICSASDDKTIKIWDVESGKMV-KTLKGHKEYVFGVSFNP-QSNL----IVSGSFDE 152
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
+ RIWDV+ +C +S H+ VT V + DG ++ +GS D T+++W+TT G+L+ +
Sbjct: 153 NVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTIST 212
Query: 280 H-GHWVNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAAL----ERY---NKIKGN 327
G V+ + S ++ L G D+T + Y++ ++ K E+Y +
Sbjct: 213 EDGKEVSFVKFSPNGKFVL-AGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVT 271
Query: 328 APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF--DKSIK 385
+ +V+GS+D ++++ + +T + GH+ +V V P +AS + D+S+K
Sbjct: 272 CGKWIVTGSEDNLIYIYNLQTREIVQT-LAGHEDVVLTVACHPTENIIASGALEKDRSVK 330
Query: 386 LW 387
+W
Sbjct: 331 IW 332
Score = 230 (86.0 bits), Expect = 3.4e-25, Sum P(2) = 3.4e-25
Identities = 65/228 (28%), Positives = 109/228 (47%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L GH K I+ + + P + SAS D +IW K L GH ++ + W
Sbjct: 42 LKGHLKSISSVKFSP-----DGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAW 96
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQ 306
D +I + S D TIK+W+ GK+++ LKGH +V ++ + + L +G+FD +
Sbjct: 97 SQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRI 156
Query: 307 YS-SPEEMKKAALERYNKIKG---NAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ + E K + + G N LV SGS D T+ +W+ + T T +
Sbjct: 157 WDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGK 216
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWN-GTTGKFVAVFRGHVGPVYQI 408
V+ V FSP+G++V + + D +++LW+ K + + GH Y I
Sbjct: 217 EVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCI 264
Score = 218 (81.8 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 75/277 (27%), Positives = 127/277 (45%)
Query: 140 QTPMF--KCT--GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKW 195
QTP + K T GH + + +S DGK L S S ++ W GK L GHK+
Sbjct: 32 QTPNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFE-RTLEGHKEG 90
Query: 196 ITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VI 254
I+ I+W + + SAS D +IWDV K V L GH V V + +I
Sbjct: 91 ISDIAW-----SQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLI 145
Query: 255 YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSP--E 311
+GS D +++W+ G+ + + H V + + + L +G++D T + + + +
Sbjct: 146 VSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQ 205
Query: 312 EMKKAALE---RYNKIKGNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVY 367
+ + E + +K + + V +G+ D T+ LW +K+ TGH+ ++
Sbjct: 206 LLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIF 265
Query: 368 --FSPD-GQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
FS G+W+ + S D I ++N T + V GH
Sbjct: 266 STFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGH 302
Score = 207 (77.9 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 49/161 (30%), Positives = 80/161 (49%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFEL 412
K + GH + ++ V FSPDG+W+ASAS DK+IK+W GKF GH + I +
Sbjct: 39 KYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQ 98
Query: 413 ---IYCFRYPSNFYCVVDMSCCMSL--------Y----SWSADSRLLLSGSKDSTLKVWD 457
+ C + D+ + Y S++ S L++SGS D +++WD
Sbjct: 99 DSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWD 158
Query: 458 IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+ T + + + H+D V V ++ DG V SG D +++W
Sbjct: 159 VNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIW 199
Score = 203 (76.5 bits), Expect = 9.0e-14, P = 9.0e-14
Identities = 60/201 (29%), Positives = 102/201 (50%)
Query: 315 KAALERYNKIKGNAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQ 373
K L+ + +K + + L S S D T+ +W K +T + GH++ ++ + +S D +
Sbjct: 43 KGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERT-LEGHKEGISDIAWSQDSK 101
Query: 374 WVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE----LIYCFRYPSN--FYCVVD 427
+ SAS DK+IK+W+ +GK V +GH V+ + F LI + N + V
Sbjct: 102 LICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNT 161
Query: 428 MSCC--MSLYS-------WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGH-ADEVFAV 477
C +S +S ++ D L++SGS D T+++WD T +L + EV V
Sbjct: 162 GECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFV 221
Query: 478 DWSPDGEKVASGGKDRVLKLW 498
+SP+G+ V +G D L+LW
Sbjct: 222 KFSPNGKFVLAGTLDNTLRLW 242
Score = 166 (63.5 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 58/240 (24%), Positives = 111/240 (46%)
Query: 281 GHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLV-SGSDDF 339
G W+ S + + GA+D GK + E K E + I + +L+ S SDD
Sbjct: 58 GKWLASASADKTIKI-WGAYD--GKFERTLEGHK----EGISDIAWSQDSKLICSASDDK 110
Query: 340 TMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFR 399
T+ +W+ K KT + GH++ V V F+P + S SFD+++++W+ TG+ +
Sbjct: 111 TIKIWDVESGKMVKT-LKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMIS 169
Query: 400 GHVGPVYQIRFE----LIYCFRYPSNFYCVVDMSCC-------------MSLYSWSADSR 442
H PV + F L+ Y + D + +S +S + +
Sbjct: 170 AHSDPVTGVHFNRDGTLVVSGSYDGTVR-IWDTTTGQLLNTISTEDGKEVSFVKFSPNGK 228
Query: 443 LLLSGSKDSTLKVWDIRT-QKLKQDLPGHADEVFAV--DWSPD-GEKVASGGKDRVLKLW 498
+L+G+ D+TL++W +K + GH +E + + +S G+ + +G +D ++ ++
Sbjct: 229 FVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIY 288
Score = 165 (63.1 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 52/182 (28%), Positives = 89/182 (48%)
Query: 93 RIRPVN--RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT-QTPMFKCTGH 149
RI VN C+ I+ H++ V V F+ DG + SGS D TVR+WD T Q T
Sbjct: 155 RIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTED 214
Query: 150 KNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAP 209
V + +S +GK +++G+ L+ W K +GHK I +
Sbjct: 215 GKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFST---FSVT 271
Query: 210 CRRF-VSASKDGDARIWDVSLRKCVICLSGHT-LAVTCVKWGGDGVIYTGS--QDCTIKV 265
C ++ V+ S+D I+++ R+ V L+GH + +T + +I +G+ +D ++K+
Sbjct: 272 CGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKI 331
Query: 266 WE 267
W+
Sbjct: 332 WK 333
Score = 111 (44.1 bits), Expect = 3.4e-25, Sum P(2) = 3.4e-25
Identities = 23/71 (32%), Positives = 43/71 (60%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
C S +S + + +++GS+D+ + +++++T+++ Q L GH D V V P +ASG
Sbjct: 263 CIFSTFSVTC-GKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASG 321
Query: 490 G--KDRVLKLW 498
KDR +K+W
Sbjct: 322 ALEKDRSVKIW 332
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 369 (135.0 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 118/419 (28%), Positives = 197/419 (47%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ ++AFS D RQL +GS D TVRLW+ T GH VL +A S+DG+
Sbjct: 770 LKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGR 829
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS ++ WD TG SG + +++ P R+ + KDG
Sbjct: 830 QIVSGSIEA-VKLWDAATGDLLKTLASG---FAGSVAFSP-----DSRQIAAGFKDGKIF 880
Query: 224 IWDVS--LRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGH 280
IWD + L+K L H A+ + + D + T S D TIK W+ T G ++E GH
Sbjct: 881 IWDAAGTLQKT---LERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGG-VQEAVGH 936
Query: 281 GHWVNSLALSTE-YALRTGAFDHTGKQYSSPE-EMKKAA---LERYNKIKGNAPERLVSG 335
V ++ LS + + +G+ D T K + + +++K L+ K+ + R +
Sbjct: 937 SKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVS 996
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
+ +W+ A K + + + V SPDG+ +AS + IKLW+ TG +
Sbjct: 997 CSSEAVKIWDAATGKVQNSFES--DDVFTIVAVSPDGKHIASGHCNGRIKLWDMATGSLL 1054
Query: 396 AVFRGHVGPVYQIRFE-LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLK 454
G Y+ +F+ L+ + + + L +S D++L+LS S D +K
Sbjct: 1055 KTMAG-----YRSKFDSLVTTEVFDIQLQEAIFNTQITGLV-FSPDAKLILSTSTDRAIK 1108
Query: 455 VWDIRTQKLKQDLPGHADEV---------------FAVDWSPDGEKVASGGKDRVLKLW 498
+WD T L++ LP H+D + F+V +S DG+ +A+ D+ +++W
Sbjct: 1109 LWDAATGDLQKRLPCHSDSIITDAFSRSSGYPNWIFSVAFSSDGQHIAAASADKTIRVW 1167
Score = 276 (102.2 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 108/389 (27%), Positives = 170/389 (43%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T GHT VLSVA S DGRQ+ SGS + V+LWD T + K T + +A+S D
Sbjct: 811 TFVGHTGTVLSVAISSDGRQIVSGSIEA-VKLWDAATGD-LLK-TLASGFAGSVAFSPDS 867
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ + +G K G++ WD G L H I I++ P ++ V+ S D
Sbjct: 868 RQIAAGFKDGKIFIWDA-AGTLQ-KTLERHPGAIMSIAFSP-----DVKQLVTCSTDSTI 920
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHG 281
+ WD+++ + GH+ VT + DG VI +GS D TIK+W+ G L + L GH
Sbjct: 921 KRWDITIGGVQEAV-GHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHL 979
Query: 282 HWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYN--KIKGNAPE--RLVSGSD 337
V + S + K + + + + E + I +P+ + SG
Sbjct: 980 DTVEKVVFSLDNRQIVSCSSEAVKIWDAATGKVQNSFESDDVFTIVAVSPDGKHIASGHC 1039
Query: 338 DFTMFLWEPAVSKQPKTRMTGHQ--------------QLVNHVY--------FSPDGQWV 375
+ + LW+ A KT M G++ QL ++ FSPD + +
Sbjct: 1040 NGRIKLWDMATGSLLKT-MAGYRSKFDSLVTTEVFDIQLQEAIFNTQITGLVFSPDAKLI 1098
Query: 376 ASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLY 435
S S D++IKLW+ TG H + F YP+ + V
Sbjct: 1099 LSTSTDRAIKLWDAATGDLQKRLPCHSDSIITDAFSR--SSGYPNWIFSV---------- 1146
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLK 464
++S+D + + + S D T++VW I + LK
Sbjct: 1147 AFSSDGQHIAAASADKTIRVWSIE-KSLK 1174
Score = 230 (86.0 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 109/400 (27%), Positives = 189/400 (47%)
Query: 115 AFSPDGRQLAS-G-SGDTT-VRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKA 171
AFS D +Q+A+ G S D+T + L+D T GH + +A+S+D + LV+GS
Sbjct: 736 AFSADCKQIAAFGWSRDSTCIMLFDTATGDLQKILKGHSHECSTMAFSSDSRQLVTGSVD 795
Query: 172 GELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRK 231
++ W+ TG GH + ++ +++ R+ VS S + ++WD +
Sbjct: 796 CTVRLWNTTTGDLE-KTFVGHTGTVLSVA-----ISSDGRQIVSGSIEA-VKLWDAATGD 848
Query: 232 CVICL-SGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL 289
+ L SG +V + D I G +D I +W+ G L + L+ H + S+A
Sbjct: 849 LLKTLASGFAGSVA---FSPDSRQIAAGFKDGKIFIWDAA-GTLQKTLERHPGAIMSIAF 904
Query: 290 STEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGN--APERLV--SGSDDFTMFLW 344
S + L T + D T K++ + A+ + +P+ V SGS D T+ LW
Sbjct: 905 SPDVKQLVTCSTDSTIKRWDITIGGVQEAVGHSKHVTTMVLSPDGKVIASGSADKTIKLW 964
Query: 345 EPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGP 404
+ A KT +TGH V V FS D + + S S +++K+W+ TGK F
Sbjct: 965 DAATGDLQKT-LTGHLDTVEKVVFSLDNRQIVSCS-SEAVKIWDAATGKVQNSFESD--D 1020
Query: 405 VYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRL-LLSG--SK-DS--TLKVWDI 458
V+ I + ++ ++ +C + + L+ + S L ++G SK DS T +V+DI
Sbjct: 1021 VFTI-VAVSPDGKHIASGHC----NGRIKLWDMATGSLLKTMAGYRSKFDSLVTTEVFDI 1075
Query: 459 RTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+ Q+ + ++ + +SPD + + S DR +KLW
Sbjct: 1076 QLQEAIFNT-----QITGLVFSPDAKLILSTSTDRAIKLW 1110
Score = 158 (60.7 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 73/338 (21%), Positives = 139/338 (41%)
Query: 184 PSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSG-HTLA 242
P L+GH + + +++ P ++ S S G ++WD + LSG H
Sbjct: 611 PMIQTLTGHSEAVWRVAFSP-----DGKQIASGSDSGLIKLWDTTTGSLQKTLSGSHPKR 665
Query: 243 --------VTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEY 293
V + + D +I +G D ++ +W+TT G +E+ H ++ + +
Sbjct: 666 RYQIQQEQVKAMAFLPDSKLIISGYYDGSVMLWDTTTGDR-QEIADH-FGISKVNYTYLQ 723
Query: 294 ALRTGAFD-HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP 352
G + H G +S+ + K+ A +++ D + L++ A
Sbjct: 724 PPEQGGYGLHAGA-FSA--DCKQIAAFGWSR-------------DSTCIMLFDTATGDLQ 767
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF-- 410
K + GH + + FS D + + + S D +++LWN TTG F GH G V +
Sbjct: 768 KI-LKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISS 826
Query: 411 ----------ELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRT 460
E + + + S ++S DSR + +G KD + +WD
Sbjct: 827 DGRQIVSGSIEAVKLWDAATGDLLKTLASGFAGSVAFSPDSRQIAAGFKDGKIFIWDA-A 885
Query: 461 QKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L++ L H + ++ +SPD +++ + D +K W
Sbjct: 886 GTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRW 923
Score = 149 (57.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 35/89 (39%), Positives = 49/89 (55%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTG-H--------KNWV 153
T+ GH+EAV VAFSPDG+Q+ASGS ++LWD T + +G H + V
Sbjct: 615 TLTGHSEAVWRVAFSPDGKQIASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQEQV 674
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTG 182
+A+ D K ++SG G + WD TG
Sbjct: 675 KAMAFLPDSKLIISGYYDGSVMLWDTTTG 703
Score = 124 (48.7 bits), Expect = 0.00061, P = 0.00061
Identities = 41/127 (32%), Positives = 60/127 (47%)
Query: 113 SVAFSPDGRQLASGSGDTTVRLW-----DL-NTQTPMFKC-TGHKNWVLCIAWSADGKHL 165
++ FSP+ + G V +W + ++ TPM + TGH V +A+S DGK +
Sbjct: 577 AIIFSPES-SVVKGENLHKVPVWLGRAPPMEDSWTPMIQTLTGHSEAVWRVAFSPDGKQI 635
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSG-HKKWITGISWEPVHLNA--P-CRRFVSASKDGD 221
SGS +G ++ WD TG LSG H K I E V A P + +S DG
Sbjct: 636 ASGSDSGLIKLWDTTTGSLQ-KTLSGSHPKRRYQIQQEQVKAMAFLPDSKLIISGYYDGS 694
Query: 222 ARIWDVS 228
+WD +
Sbjct: 695 VMLWDTT 701
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 337 (123.7 bits), Expect = 1.9e-30, P = 1.9e-30
Identities = 101/312 (32%), Positives = 153/312 (49%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
++P T+AGHT+AV +V FSP+G LAS S D +++W +GHK +
Sbjct: 58 VKPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 117
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRF 213
+AWS+D + LVSGS L+ W+ TGK S L GH ++ ++ P N
Sbjct: 118 SDVAWSSDSRLLVSGSDDKTLKVWELSTGK-SLKTLKGHSNYVFCCNFNP-QSNL----I 171
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
VS S D RIWDV KC+ L H+ V+ V + DG +I + S D ++W+T G+
Sbjct: 172 VSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 231
Query: 273 LIRELKGHGHW-VNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAALERYNK--IK 325
++ L + V+ + S +Y L D+T K YS + +K + K I
Sbjct: 232 CLKTLIDDDNPPVSFVKFSPNGKYIL-AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 290
Query: 326 GN----APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF- 380
N + +VSGS+D +++W SK+ ++ GH V P +ASA+
Sbjct: 291 ANFSVTGGKWIVSGSEDNMVYIWN-LQSKEVVQKLQGHTDTVLCTACHPTENIIASAALE 349
Query: 381 -DKSIKLWNGTT 391
DK+IKLW T
Sbjct: 350 NDKTIKLWKSDT 361
Score = 247 (92.0 bits), Expect = 6.2e-26, Sum P(2) = 6.2e-26
Identities = 69/231 (29%), Positives = 115/231 (49%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L+GH K ++ + + P N S+S D +IW K +SGH L ++ V W
Sbjct: 68 LAGHTKAVSAVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 122
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDH---- 302
D ++ +GS D T+KVWE + GK ++ LKGH ++V + + L +G+FD
Sbjct: 123 SSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 182
Query: 303 ----TGKQYSS-PEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
TGK + P + +N+ G+ +VS S D +W+ A + KT +
Sbjct: 183 WDVRTGKCLKTLPAHSDPVSAVHFNR-DGSL---IVSSSYDGLCRIWDTASGQCLKTLID 238
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
V+ V FSP+G+++ +A+ D ++KLW+ + GK + + GH Y I
Sbjct: 239 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 289
Score = 235 (87.8 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 71/277 (25%), Positives = 132/277 (47%)
Query: 141 TPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGIS 200
T F GH V + +S +G+ L S S ++ W GK +SGHK I+ ++
Sbjct: 63 TLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVA 121
Query: 201 WEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQ 259
W ++ R VS S D ++W++S K + L GH+ V C + +I +GS
Sbjct: 122 W-----SSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSF 176
Query: 260 DCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPE-EMKKAA 317
D ++++W+ GK ++ L H V+++ + + +L + ++D + + + + K
Sbjct: 177 DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 236
Query: 318 LERYN------KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVY--FS 369
++ N K N + +++ + D T+ LW+ + K KT TGH+ ++ FS
Sbjct: 237 IDDDNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSKGKCLKT-YTGHKNEKYCIFANFS 294
Query: 370 -PDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
G+W+ S S D + +WN + + V +GH V
Sbjct: 295 VTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTV 331
Score = 210 (79.0 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 51/161 (31%), Positives = 83/161 (51%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFEL 412
K + GH + V+ V FSP+G+W+AS+S DK IK+W GKF GH + + +
Sbjct: 65 KFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 124
Query: 413 ---IYCFRYPSNFYCVVDMSCCMSL--------Y----SWSADSRLLLSGSKDSTLKVWD 457
+ V ++S SL Y +++ S L++SGS D ++++WD
Sbjct: 125 DSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 184
Query: 458 IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+RT K + LP H+D V AV ++ DG + S D + ++W
Sbjct: 185 VRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 225
Score = 210 (79.0 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 56/186 (30%), Positives = 93/186 (50%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
LVSGSDD T+ +WE + K KT + GH V F+P + S SFD+S+++W+ T
Sbjct: 129 LVSGSDDKTLKVWELSTGKSLKT-LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 187
Query: 392 GKFVAVFRGHVGPVYQIRFE----LIYCFRYP--------SNFYC----VVDMSCCMSLY 435
GK + H PV + F LI Y ++ C + D + +S
Sbjct: 188 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 247
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAV--DWSPDGEK-VASGGKD 492
+S + + +L+ + D+TLK+WD K + GH +E + + ++S G K + SG +D
Sbjct: 248 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 307
Query: 493 RVLKLW 498
++ +W
Sbjct: 308 NMVYIW 313
Score = 101 (40.6 bits), Expect = 6.2e-26, Sum P(2) = 6.2e-26
Identities = 20/71 (28%), Positives = 40/71 (56%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
C + +S + + ++SGS+D+ + +W+++++++ Q L GH D V P +AS
Sbjct: 288 CIFANFSVTG-GKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASA 346
Query: 490 G--KDRVLKLW 498
D+ +KLW
Sbjct: 347 ALENDKTIKLW 357
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 332 (121.9 bits), Expect = 7.1e-30, P = 7.1e-30
Identities = 95/303 (31%), Positives = 149/303 (49%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT-----QTPMFKCTGHKNWVLC 155
S T+ H AV SV FS DGR LAS S D T+R + +NT P+ + TGH+N +
Sbjct: 17 SQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISD 76
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+A+S+D + +VS S L+ WD +TG L GH + +++ P VS
Sbjct: 77 VAFSSDARFIVSASDDKTLKLWDVETGSLI-KTLIGHTNYAFCVNFNP-----QSNMIVS 130
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLI 274
S D RIWDV+ KC+ L H+ VT V + DG +I + S D ++W++ G +
Sbjct: 131 GSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCV 190
Query: 275 REL-KGHGHWVNSLALSTEYA-LRTGAFDHTGKQYS-SPEEMKKAALERYNK---IKG-- 326
+ L V+ + S + G D+T + ++ S + K N I
Sbjct: 191 KTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAF 250
Query: 327 --NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
+R+VSGS+D + +WE SK+ ++ GH + V +V P +AS S DK++
Sbjct: 251 SVTNGKRIVSGSEDNCVHMWE-LNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTV 309
Query: 385 KLW 387
++W
Sbjct: 310 RIW 312
Score = 243 (90.6 bits), Expect = 6.7e-20, P = 6.7e-20
Identities = 75/260 (28%), Positives = 116/260 (44%)
Query: 96 PVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
P+ GH + VAFS D R + S S D T++LWD+ T + + GH N+ C
Sbjct: 59 PIAEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFC 118
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ ++ +VSGS ++ WD TGK L H +T + + N VS
Sbjct: 119 VNFNPQSNMIVSGSFDETVRIWDVTTGKCL-KVLPAHSDPVTAVDF-----NRDGSLIVS 172
Query: 216 ASKDGDARIWDVSLRKCVICL-SGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKL 273
+S DG RIWD CV L V+ V++ +G I G+ D T+++W + K
Sbjct: 173 SSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKF 232
Query: 274 IRELKGH--GHWVNSLALSTEYALR--TGAFDHTGKQYSSPEEMKKAALERYNKIKGNA- 328
++ GH + S A S R +G+ D+ + + LE + + N
Sbjct: 233 LKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVA 292
Query: 329 --P-ERLV-SGSDDFTMFLW 344
P E L+ SGS D T+ +W
Sbjct: 293 CHPTENLIASGSLDKTVRIW 312
Score = 184 (69.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 70/294 (23%), Positives = 132/294 (44%)
Query: 204 VHLNAPCRRFVSASKDGDARIWDVS-----LRKCVICLSGHTLAVTCVKWGGDG-VIYTG 257
V ++ R SAS D R + ++ + + V +GH ++ V + D I +
Sbjct: 30 VKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSA 89
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEY-ALRTGAFDHTGKQY--SSPEEMK 314
S D T+K+W+ G LI+ L GH ++ + + + + +G+FD T + + ++ + +K
Sbjct: 90 SDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLK 149
Query: 315 --KAALERYNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPD 371
A + + N L VS S D +W+ KT + V+ V FSP+
Sbjct: 150 VLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPN 209
Query: 372 GQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCC 431
G+++ + D +++LWN ++ KF+ + GHV Y I F +N +V S
Sbjct: 210 GKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISS----AFSV-TNGKRIVSGSED 264
Query: 432 MSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP-GHADEVFAVDWSPDGE 484
++ W +S+ LL + T V ++ + + G D+ + W+ E
Sbjct: 265 NCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRI-WTQKKE 317
Score = 156 (60.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 46/164 (28%), Positives = 75/164 (45%)
Query: 351 QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+P TGH+ ++ V FS D +++ SAS DK++KLW+ TG + GH + + F
Sbjct: 62 EPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNF 121
Query: 411 E----LIYC--FRYPSNFYCVVDMSCCMSL--YS-------WSADSRLLLSGSKDSTLKV 455
+I F + V C L +S ++ D L++S S D ++
Sbjct: 122 NPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRI 181
Query: 456 WDIRTQK-LKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
WD T +K + V V +SP+G+ + G D L+LW
Sbjct: 182 WDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLW 225
Score = 121 (47.7 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
C S +S + R++ SGS+D+ + +W++ ++KL Q L GH + V V P +ASG
Sbjct: 245 CISSAFSVTNGKRIV-SGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASG 303
Query: 490 GKDRVLKLW 498
D+ +++W
Sbjct: 304 SLDKTVRIW 312
Score = 83 (34.3 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLW-----NGTTGKFVAVFRGHVGPVYQIRF 410
+T H + V+ V FS DG+ +ASAS DK+I+ + N + V F GH + + F
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAF 79
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 329 (120.9 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 98/308 (31%), Positives = 150/308 (48%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
++P T+AGHT+AV SV FSP+G LAS S D +++W +GHK +
Sbjct: 31 VKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRF 213
+AWS+D LVS S L+ WD +GK L GH ++ ++ P N
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-QSNL----I 144
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
VS S D RIWDV KC+ L H+ V+ V + DG +I + S D ++W+T G+
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 273 LIRELKGHGHW-VNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAALERYNK--IK 325
++ L + V+ + S +Y L D+T K YS + +K + K I
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYIL-AATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIF 263
Query: 326 GN----APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF- 380
N + +VSGS+D +++W +K+ ++ GH +V P +ASA+
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWN-LQTKEVVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 381 -DKSIKLW 387
DK+IKLW
Sbjct: 323 NDKTIKLW 330
Score = 243 (90.6 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 75/277 (27%), Positives = 132/277 (47%)
Query: 141 TPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGIS 200
T F GH V + +S +G+ L S S ++ W GK +SGHK I+ ++
Sbjct: 36 TLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVA 94
Query: 201 WEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQ 259
W ++ VSAS D +IWDVS KC+ L GH+ V C + +I +GS
Sbjct: 95 W-----SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 149
Query: 260 DCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPE-EMKKAA 317
D ++++W+ GK ++ L H V+++ + + +L + ++D + + + + K
Sbjct: 150 DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 209
Query: 318 LERYN------KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVY--FS 369
++ N K N + +++ + D T+ LW+ + K KT T H+ ++ FS
Sbjct: 210 IDDDNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSKGKCLKT-YTCHKNEKYCIFANFS 267
Query: 370 -PDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
G+W+ S S D + +WN T + V +GH V
Sbjct: 268 VTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVV 304
Score = 231 (86.4 bits), Expect = 8.3e-25, Sum P(2) = 8.3e-25
Identities = 65/231 (28%), Positives = 113/231 (48%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L+GH K ++ + + P N S+S D +IW K +SGH L ++ V W
Sbjct: 41 LAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 95
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDH---- 302
D ++ + S D T+K+W+ + GK ++ LKGH ++V + + L +G+FD
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 303 ----TGKQYSS-PEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
TGK + P + +N+ G+ +VS S D +W+ A + KT +
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNR-DGSL---IVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
V+ V FSP+G+++ +A+ D ++KLW+ + GK + + H Y I
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCI 262
Score = 213 (80.0 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 50/161 (31%), Positives = 84/161 (52%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFEL 412
K + GH + V+ V FSP+G+W+AS+S DK IK+W GKF GH + + +
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 97
Query: 413 ---IYCFRYPSNFYCVVDMS---CCMSL-----Y----SWSADSRLLLSGSKDSTLKVWD 457
+ + D+S C +L Y +++ S L++SGS D ++++WD
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 458 IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
++T K + LP H+D V AV ++ DG + S D + ++W
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 198
Score = 189 (71.6 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 53/186 (28%), Positives = 91/186 (48%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
LVS SDD T+ +W+ + K KT + GH V F+P + S SFD+S+++W+ T
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKT-LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 392 GKFVAVFRGHVGPVYQIRFE----LIYCFRYP--------SNFYC----VVDMSCCMSLY 435
GK + H PV + F LI Y ++ C + D + +S
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 220
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAV--DWSPDGEK-VASGGKD 492
+S + + +L+ + D+TLK+WD K + H +E + + ++S G K + SG +D
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSED 280
Query: 493 RVLKLW 498
++ +W
Sbjct: 281 NLVYIW 286
Score = 105 (42.0 bits), Expect = 8.3e-25, Sum P(2) = 8.3e-25
Identities = 21/71 (29%), Positives = 41/71 (57%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
C + +S + + ++SGS+D+ + +W+++T+++ Q L GH D V + P +AS
Sbjct: 261 CIFANFSVTG-GKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIASA 319
Query: 490 G--KDRVLKLW 498
D+ +KLW
Sbjct: 320 ALENDKTIKLW 330
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 325 (119.5 bits), Expect = 4.7e-29, P = 4.7e-29
Identities = 98/308 (31%), Positives = 150/308 (48%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
++P T+AGHT+AV SV FSP+G LAS S D +++W +GHK +
Sbjct: 5 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 64
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRF 213
+AWS+D LVS S L+ WD +GK L GH ++ ++ P N
Sbjct: 65 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-QSNL----I 118
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
VS S D RIWDV KC+ L H+ V+ V + DG +I + S D ++W+T G+
Sbjct: 119 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 178
Query: 273 LIRELKGHGHW-VNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAALERYNK--IK 325
++ L + V+ + S +Y L D+T K YS + +K + K I
Sbjct: 179 CLKTLIDDDNPPVSFVKFSPNGKYIL-AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 237
Query: 326 GN----APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF- 380
N + +VSGS+D +++W +K+ ++ GH +V P +ASA+
Sbjct: 238 ANFSVTGGKWIVSGSEDNLVYIWN-LQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 296
Query: 381 -DKSIKLW 387
DK+IKLW
Sbjct: 297 NDKTIKLW 304
Score = 252 (93.8 bits), Expect = 6.9e-21, P = 6.9e-21
Identities = 75/274 (27%), Positives = 132/274 (48%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
F GH V + +S +G+ L S S ++ W GK +SGHK I+ ++W
Sbjct: 13 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAW-- 69
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
++ VSAS D +IWDVS KC+ L GH+ V C + +I +GS D +
Sbjct: 70 ---SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 126
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPE-EMKKAALER 320
+++W+ GK ++ L H V+++ + + +L + ++D + + + + K ++
Sbjct: 127 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 186
Query: 321 YN------KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVY--FS-PD 371
N K N + +++ + D T+ LW+ + K KT TGH+ ++ FS
Sbjct: 187 DNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSKGKCLKT-YTGHKNEKYCIFANFSVTG 244
Query: 372 GQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
G+W+ S S D + +WN T + V +GH V
Sbjct: 245 GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 278
Score = 240 (89.5 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 66/231 (28%), Positives = 114/231 (49%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L+GH K ++ + + P N S+S D +IW K +SGH L ++ V W
Sbjct: 15 LAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 69
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDH---- 302
D ++ + S D T+K+W+ + GK ++ LKGH ++V + + L +G+FD
Sbjct: 70 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 129
Query: 303 ----TGKQYSS-PEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
TGK + P + +N+ G+ +VS S D +W+ A + KT +
Sbjct: 130 WDVKTGKCLKTLPAHSDPVSAVHFNR-DGSL---IVSSSYDGLCRIWDTASGQCLKTLID 185
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
V+ V FSP+G+++ +A+ D ++KLW+ + GK + + GH Y I
Sbjct: 186 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 236
Score = 213 (80.0 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 50/161 (31%), Positives = 84/161 (52%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFEL 412
K + GH + V+ V FSP+G+W+AS+S DK IK+W GKF GH + + +
Sbjct: 12 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 71
Query: 413 ---IYCFRYPSNFYCVVDMS---CCMSL-----Y----SWSADSRLLLSGSKDSTLKVWD 457
+ + D+S C +L Y +++ S L++SGS D ++++WD
Sbjct: 72 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 131
Query: 458 IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
++T K + LP H+D V AV ++ DG + S D + ++W
Sbjct: 132 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 172
Score = 198 (74.8 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 54/186 (29%), Positives = 92/186 (49%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
LVS SDD T+ +W+ + K KT + GH V F+P + S SFD+S+++W+ T
Sbjct: 76 LVSASDDKTLKIWDVSSGKCLKT-LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 134
Query: 392 GKFVAVFRGHVGPVYQIRFE----LIYCFRYP--------SNFYC----VVDMSCCMSLY 435
GK + H PV + F LI Y ++ C + D + +S
Sbjct: 135 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 194
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAV--DWSPDGEK-VASGGKD 492
+S + + +L+ + D+TLK+WD K + GH +E + + ++S G K + SG +D
Sbjct: 195 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 254
Query: 493 RVLKLW 498
++ +W
Sbjct: 255 NLVYIW 260
Score = 106 (42.4 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 21/71 (29%), Positives = 41/71 (57%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
C + +S + + ++SGS+D+ + +W+++T+++ Q L GH D V + P +AS
Sbjct: 235 CIFANFSVTG-GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASA 293
Query: 490 G--KDRVLKLW 498
D+ +KLW
Sbjct: 294 ALENDKTIKLW 304
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 325 (119.5 bits), Expect = 4.7e-29, P = 4.7e-29
Identities = 98/308 (31%), Positives = 150/308 (48%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
++P T+AGHT+AV SV FSP+G LAS S D +++W +GHK +
Sbjct: 31 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRF 213
+AWS+D LVS S L+ WD +GK L GH ++ ++ P N
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-QSNL----I 144
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
VS S D RIWDV KC+ L H+ V+ V + DG +I + S D ++W+T G+
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 273 LIRELKGHGHW-VNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAALERYNK--IK 325
++ L + V+ + S +Y L D+T K YS + +K + K I
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYIL-AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 263
Query: 326 GN----APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF- 380
N + +VSGS+D +++W +K+ ++ GH +V P +ASA+
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWN-LQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 381 -DKSIKLW 387
DK+IKLW
Sbjct: 323 NDKTIKLW 330
Score = 252 (93.8 bits), Expect = 6.9e-21, P = 6.9e-21
Identities = 75/274 (27%), Positives = 132/274 (48%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
F GH V + +S +G+ L S S ++ W GK +SGHK I+ ++W
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAW-- 95
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
++ VSAS D +IWDVS KC+ L GH+ V C + +I +GS D +
Sbjct: 96 ---SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPE-EMKKAALER 320
+++W+ GK ++ L H V+++ + + +L + ++D + + + + K ++
Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 212
Query: 321 YN------KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVY--FS-PD 371
N K N + +++ + D T+ LW+ + K KT TGH+ ++ FS
Sbjct: 213 DNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSKGKCLKT-YTGHKNEKYCIFANFSVTG 270
Query: 372 GQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
G+W+ S S D + +WN T + V +GH V
Sbjct: 271 GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
Score = 240 (89.5 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 66/231 (28%), Positives = 114/231 (49%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L+GH K ++ + + P N S+S D +IW K +SGH L ++ V W
Sbjct: 41 LAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 95
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDH---- 302
D ++ + S D T+K+W+ + GK ++ LKGH ++V + + L +G+FD
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 303 ----TGKQYSS-PEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
TGK + P + +N+ G+ +VS S D +W+ A + KT +
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNR-DGSL---IVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
V+ V FSP+G+++ +A+ D ++KLW+ + GK + + GH Y I
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 262
Score = 213 (80.0 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 50/161 (31%), Positives = 84/161 (52%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFEL 412
K + GH + V+ V FSP+G+W+AS+S DK IK+W GKF GH + + +
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 97
Query: 413 ---IYCFRYPSNFYCVVDMS---CCMSL-----Y----SWSADSRLLLSGSKDSTLKVWD 457
+ + D+S C +L Y +++ S L++SGS D ++++WD
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 458 IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
++T K + LP H+D V AV ++ DG + S D + ++W
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 198
Score = 198 (74.8 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 54/186 (29%), Positives = 92/186 (49%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
LVS SDD T+ +W+ + K KT + GH V F+P + S SFD+S+++W+ T
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKT-LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 392 GKFVAVFRGHVGPVYQIRFE----LIYCFRYP--------SNFYC----VVDMSCCMSLY 435
GK + H PV + F LI Y ++ C + D + +S
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 220
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAV--DWSPDGEK-VASGGKD 492
+S + + +L+ + D+TLK+WD K + GH +E + + ++S G K + SG +D
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 280
Query: 493 RVLKLW 498
++ +W
Sbjct: 281 NLVYIW 286
Score = 106 (42.4 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 21/71 (29%), Positives = 41/71 (57%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
C + +S + + ++SGS+D+ + +W+++T+++ Q L GH D V + P +AS
Sbjct: 261 CIFANFSVTG-GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASA 319
Query: 490 G--KDRVLKLW 498
D+ +KLW
Sbjct: 320 ALENDKTIKLW 330
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 325 (119.5 bits), Expect = 4.7e-29, P = 4.7e-29
Identities = 98/308 (31%), Positives = 150/308 (48%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
++P T+AGHT+AV SV FSP+G LAS S D +++W +GHK +
Sbjct: 31 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRF 213
+AWS+D LVS S L+ WD +GK L GH ++ ++ P N
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-QSNL----I 144
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
VS S D RIWDV KC+ L H+ V+ V + DG +I + S D ++W+T G+
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 273 LIRELKGHGHW-VNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAALERYNK--IK 325
++ L + V+ + S +Y L D+T K YS + +K + K I
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYIL-AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 263
Query: 326 GN----APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF- 380
N + +VSGS+D +++W +K+ ++ GH +V P +ASA+
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWN-LQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 381 -DKSIKLW 387
DK+IKLW
Sbjct: 323 NDKTIKLW 330
Score = 252 (93.8 bits), Expect = 6.9e-21, P = 6.9e-21
Identities = 75/274 (27%), Positives = 132/274 (48%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
F GH V + +S +G+ L S S ++ W GK +SGHK I+ ++W
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAW-- 95
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
++ VSAS D +IWDVS KC+ L GH+ V C + +I +GS D +
Sbjct: 96 ---SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPE-EMKKAALER 320
+++W+ GK ++ L H V+++ + + +L + ++D + + + + K ++
Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 212
Query: 321 YN------KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVY--FS-PD 371
N K N + +++ + D T+ LW+ + K KT TGH+ ++ FS
Sbjct: 213 DNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSKGKCLKT-YTGHKNEKYCIFANFSVTG 270
Query: 372 GQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
G+W+ S S D + +WN T + V +GH V
Sbjct: 271 GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
Score = 240 (89.5 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 66/231 (28%), Positives = 114/231 (49%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L+GH K ++ + + P N S+S D +IW K +SGH L ++ V W
Sbjct: 41 LAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 95
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDH---- 302
D ++ + S D T+K+W+ + GK ++ LKGH ++V + + L +G+FD
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 303 ----TGKQYSS-PEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
TGK + P + +N+ G+ +VS S D +W+ A + KT +
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNR-DGSL---IVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
V+ V FSP+G+++ +A+ D ++KLW+ + GK + + GH Y I
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 262
Score = 213 (80.0 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 50/161 (31%), Positives = 84/161 (52%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFEL 412
K + GH + V+ V FSP+G+W+AS+S DK IK+W GKF GH + + +
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 97
Query: 413 ---IYCFRYPSNFYCVVDMS---CCMSL-----Y----SWSADSRLLLSGSKDSTLKVWD 457
+ + D+S C +L Y +++ S L++SGS D ++++WD
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 458 IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
++T K + LP H+D V AV ++ DG + S D + ++W
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 198
Score = 198 (74.8 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 54/186 (29%), Positives = 92/186 (49%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
LVS SDD T+ +W+ + K KT + GH V F+P + S SFD+S+++W+ T
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKT-LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 392 GKFVAVFRGHVGPVYQIRFE----LIYCFRYP--------SNFYC----VVDMSCCMSLY 435
GK + H PV + F LI Y ++ C + D + +S
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 220
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAV--DWSPDGEK-VASGGKD 492
+S + + +L+ + D+TLK+WD K + GH +E + + ++S G K + SG +D
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 280
Query: 493 RVLKLW 498
++ +W
Sbjct: 281 NLVYIW 286
Score = 106 (42.4 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 21/71 (29%), Positives = 41/71 (57%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
C + +S + + ++SGS+D+ + +W+++T+++ Q L GH D V + P +AS
Sbjct: 261 CIFANFSVTG-GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASA 319
Query: 490 G--KDRVLKLW 498
D+ +KLW
Sbjct: 320 ALENDKTIKLW 330
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 325 (119.5 bits), Expect = 4.7e-29, P = 4.7e-29
Identities = 98/308 (31%), Positives = 150/308 (48%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
++P T+AGHT+AV SV FSP+G LAS S D +++W +GHK +
Sbjct: 31 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRF 213
+AWS+D LVS S L+ WD +GK L GH ++ ++ P N
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-QSNL----I 144
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
VS S D RIWDV KC+ L H+ V+ V + DG +I + S D ++W+T G+
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 273 LIRELKGHGHW-VNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAALERYNK--IK 325
++ L + V+ + S +Y L D+T K YS + +K + K I
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYIL-AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 263
Query: 326 GN----APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF- 380
N + +VSGS+D +++W +K+ ++ GH +V P +ASA+
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWN-LQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 381 -DKSIKLW 387
DK+IKLW
Sbjct: 323 NDKTIKLW 330
Score = 252 (93.8 bits), Expect = 6.9e-21, P = 6.9e-21
Identities = 75/274 (27%), Positives = 132/274 (48%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
F GH V + +S +G+ L S S ++ W GK +SGHK I+ ++W
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAW-- 95
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
++ VSAS D +IWDVS KC+ L GH+ V C + +I +GS D +
Sbjct: 96 ---SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPE-EMKKAALER 320
+++W+ GK ++ L H V+++ + + +L + ++D + + + + K ++
Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 212
Query: 321 YN------KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVY--FS-PD 371
N K N + +++ + D T+ LW+ + K KT TGH+ ++ FS
Sbjct: 213 DNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSKGKCLKT-YTGHKNEKYCIFANFSVTG 270
Query: 372 GQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
G+W+ S S D + +WN T + V +GH V
Sbjct: 271 GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
Score = 240 (89.5 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 66/231 (28%), Positives = 114/231 (49%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L+GH K ++ + + P N S+S D +IW K +SGH L ++ V W
Sbjct: 41 LAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 95
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDH---- 302
D ++ + S D T+K+W+ + GK ++ LKGH ++V + + L +G+FD
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 303 ----TGKQYSS-PEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
TGK + P + +N+ G+ +VS S D +W+ A + KT +
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNR-DGSL---IVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
V+ V FSP+G+++ +A+ D ++KLW+ + GK + + GH Y I
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 262
Score = 213 (80.0 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 50/161 (31%), Positives = 84/161 (52%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFEL 412
K + GH + V+ V FSP+G+W+AS+S DK IK+W GKF GH + + +
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 97
Query: 413 ---IYCFRYPSNFYCVVDMS---CCMSL-----Y----SWSADSRLLLSGSKDSTLKVWD 457
+ + D+S C +L Y +++ S L++SGS D ++++WD
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 458 IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
++T K + LP H+D V AV ++ DG + S D + ++W
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 198
Score = 198 (74.8 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 54/186 (29%), Positives = 92/186 (49%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
LVS SDD T+ +W+ + K KT + GH V F+P + S SFD+S+++W+ T
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKT-LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 392 GKFVAVFRGHVGPVYQIRFE----LIYCFRYP--------SNFYC----VVDMSCCMSLY 435
GK + H PV + F LI Y ++ C + D + +S
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 220
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAV--DWSPDGEK-VASGGKD 492
+S + + +L+ + D+TLK+WD K + GH +E + + ++S G K + SG +D
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 280
Query: 493 RVLKLW 498
++ +W
Sbjct: 281 NLVYIW 286
Score = 106 (42.4 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 21/71 (29%), Positives = 41/71 (57%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
C + +S + + ++SGS+D+ + +W+++T+++ Q L GH D V + P +AS
Sbjct: 261 CIFANFSVTG-GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASA 319
Query: 490 G--KDRVLKLW 498
D+ +KLW
Sbjct: 320 ALENDKTIKLW 330
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 325 (119.5 bits), Expect = 4.7e-29, P = 4.7e-29
Identities = 98/308 (31%), Positives = 150/308 (48%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
++P T+AGHT+AV SV FSP+G LAS S D +++W +GHK +
Sbjct: 31 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRF 213
+AWS+D LVS S L+ WD +GK L GH ++ ++ P N
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-QSNL----I 144
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
VS S D RIWDV KC+ L H+ V+ V + DG +I + S D ++W+T G+
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 273 LIRELKGHGHW-VNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAALERYNK--IK 325
++ L + V+ + S +Y L D+T K YS + +K + K I
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYIL-AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 263
Query: 326 GN----APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF- 380
N + +VSGS+D +++W +K+ ++ GH +V P +ASA+
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWN-LQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 381 -DKSIKLW 387
DK+IKLW
Sbjct: 323 NDKTIKLW 330
Score = 252 (93.8 bits), Expect = 6.9e-21, P = 6.9e-21
Identities = 75/274 (27%), Positives = 132/274 (48%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
F GH V + +S +G+ L S S ++ W GK +SGHK I+ ++W
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAW-- 95
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
++ VSAS D +IWDVS KC+ L GH+ V C + +I +GS D +
Sbjct: 96 ---SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPE-EMKKAALER 320
+++W+ GK ++ L H V+++ + + +L + ++D + + + + K ++
Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 212
Query: 321 YN------KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVY--FS-PD 371
N K N + +++ + D T+ LW+ + K KT TGH+ ++ FS
Sbjct: 213 DNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSKGKCLKT-YTGHKNEKYCIFANFSVTG 270
Query: 372 GQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
G+W+ S S D + +WN T + V +GH V
Sbjct: 271 GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
Score = 240 (89.5 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 66/231 (28%), Positives = 114/231 (49%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L+GH K ++ + + P N S+S D +IW K +SGH L ++ V W
Sbjct: 41 LAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 95
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDH---- 302
D ++ + S D T+K+W+ + GK ++ LKGH ++V + + L +G+FD
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 303 ----TGKQYSS-PEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
TGK + P + +N+ G+ +VS S D +W+ A + KT +
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNR-DGSL---IVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
V+ V FSP+G+++ +A+ D ++KLW+ + GK + + GH Y I
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 262
Score = 213 (80.0 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 50/161 (31%), Positives = 84/161 (52%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFEL 412
K + GH + V+ V FSP+G+W+AS+S DK IK+W GKF GH + + +
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 97
Query: 413 ---IYCFRYPSNFYCVVDMS---CCMSL-----Y----SWSADSRLLLSGSKDSTLKVWD 457
+ + D+S C +L Y +++ S L++SGS D ++++WD
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 458 IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
++T K + LP H+D V AV ++ DG + S D + ++W
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 198
Score = 198 (74.8 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 54/186 (29%), Positives = 92/186 (49%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
LVS SDD T+ +W+ + K KT + GH V F+P + S SFD+S+++W+ T
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKT-LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 392 GKFVAVFRGHVGPVYQIRFE----LIYCFRYP--------SNFYC----VVDMSCCMSLY 435
GK + H PV + F LI Y ++ C + D + +S
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 220
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAV--DWSPDGEK-VASGGKD 492
+S + + +L+ + D+TLK+WD K + GH +E + + ++S G K + SG +D
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 280
Query: 493 RVLKLW 498
++ +W
Sbjct: 281 NLVYIW 286
Score = 106 (42.4 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 21/71 (29%), Positives = 41/71 (57%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
C + +S + + ++SGS+D+ + +W+++T+++ Q L GH D V + P +AS
Sbjct: 261 CIFANFSVTG-GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASA 319
Query: 490 G--KDRVLKLW 498
D+ +KLW
Sbjct: 320 ALENDKTIKLW 330
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 325 (119.5 bits), Expect = 4.7e-29, P = 4.7e-29
Identities = 98/308 (31%), Positives = 150/308 (48%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
++P T+AGHT+AV SV FSP+G LAS S D +++W +GHK +
Sbjct: 31 VKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI 90
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRF 213
+AWS+D LVS S L+ WD +GK L GH ++ ++ P N
Sbjct: 91 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL-KTLKGHSNYVFCCNFNP-QSNL----I 144
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
VS S D RIWDV KC+ L H+ V+ V + DG +I + S D ++W+T G+
Sbjct: 145 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 204
Query: 273 LIRELKGHGHW-VNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAALERYNK--IK 325
++ L + V+ + S +Y L D+T K YS + +K + K I
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYIL-AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF 263
Query: 326 GN----APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF- 380
N + +VSGS+D +++W +K+ ++ GH +V P +ASA+
Sbjct: 264 ANFSVTGGKWIVSGSEDNLVYIWN-LQTKEIVQKLQGHTDVVISTACHPTENIIASAALE 322
Query: 381 -DKSIKLW 387
DK+IKLW
Sbjct: 323 NDKTIKLW 330
Score = 252 (93.8 bits), Expect = 6.9e-21, P = 6.9e-21
Identities = 75/274 (27%), Positives = 132/274 (48%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
F GH V + +S +G+ L S S ++ W GK +SGHK I+ ++W
Sbjct: 39 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKLGISDVAW-- 95
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
++ VSAS D +IWDVS KC+ L GH+ V C + +I +GS D +
Sbjct: 96 ---SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 152
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPE-EMKKAALER 320
+++W+ GK ++ L H V+++ + + +L + ++D + + + + K ++
Sbjct: 153 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 212
Query: 321 YN------KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVY--FS-PD 371
N K N + +++ + D T+ LW+ + K KT TGH+ ++ FS
Sbjct: 213 DNPPVSFVKFSPNG-KYILAATLDNTLKLWDYSKGKCLKT-YTGHKNEKYCIFANFSVTG 270
Query: 372 GQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
G+W+ S S D + +WN T + V +GH V
Sbjct: 271 GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
Score = 240 (89.5 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 66/231 (28%), Positives = 114/231 (49%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L+GH K ++ + + P N S+S D +IW K +SGH L ++ V W
Sbjct: 41 LAGHTKAVSSVKFSP---NGEW--LASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW 95
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDH---- 302
D ++ + S D T+K+W+ + GK ++ LKGH ++V + + L +G+FD
Sbjct: 96 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 155
Query: 303 ----TGKQYSS-PEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
TGK + P + +N+ G+ +VS S D +W+ A + KT +
Sbjct: 156 WDVKTGKCLKTLPAHSDPVSAVHFNR-DGSL---IVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
V+ V FSP+G+++ +A+ D ++KLW+ + GK + + GH Y I
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCI 262
Score = 213 (80.0 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 50/161 (31%), Positives = 84/161 (52%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFEL 412
K + GH + V+ V FSP+G+W+AS+S DK IK+W GKF GH + + +
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 97
Query: 413 ---IYCFRYPSNFYCVVDMS---CCMSL-----Y----SWSADSRLLLSGSKDSTLKVWD 457
+ + D+S C +L Y +++ S L++SGS D ++++WD
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 458 IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
++T K + LP H+D V AV ++ DG + S D + ++W
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 198
Score = 198 (74.8 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 54/186 (29%), Positives = 92/186 (49%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
LVS SDD T+ +W+ + K KT + GH V F+P + S SFD+S+++W+ T
Sbjct: 102 LVSASDDKTLKIWDVSSGKCLKT-LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 160
Query: 392 GKFVAVFRGHVGPVYQIRFE----LIYCFRYP--------SNFYC----VVDMSCCMSLY 435
GK + H PV + F LI Y ++ C + D + +S
Sbjct: 161 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFV 220
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAV--DWSPDGEK-VASGGKD 492
+S + + +L+ + D+TLK+WD K + GH +E + + ++S G K + SG +D
Sbjct: 221 KFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 280
Query: 493 RVLKLW 498
++ +W
Sbjct: 281 NLVYIW 286
Score = 106 (42.4 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 21/71 (29%), Positives = 41/71 (57%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
C + +S + + ++SGS+D+ + +W+++T+++ Q L GH D V + P +AS
Sbjct: 261 CIFANFSVTG-GKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASA 319
Query: 490 G--KDRVLKLW 498
D+ +KLW
Sbjct: 320 ALENDKTIKLW 330
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 284 (105.0 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 84/293 (28%), Positives = 129/293 (44%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH + SV F P + S S D T+++WD + GH N V I + G
Sbjct: 102 LTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGN 161
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD QT L GH ++ + + P + +S+S+D +
Sbjct: 162 LLASCSADLTIKLWDFQT-YDCVKTLHGHDHNVSCVRFTPSG-----DQLISSSRDKTIK 215
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+ + C+ L GH V + DG I + S D TIK W +G+ + + H H
Sbjct: 216 VWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSH 275
Query: 283 WVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMF 342
V LA ST D G S+PE K + G L +GS D T+
Sbjct: 276 VVECLAFST-----ANIIDIPGSLLSTPEGKSKVKQGPGGNLVGQCGY-LATGSRDKTIK 329
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
+WE A + T + GH V V F P G+++ S DK+I++W+ G+ +
Sbjct: 330 IWELATGRCLATYI-GHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCI 381
Score = 258 (95.9 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 76/273 (27%), Positives = 130/273 (47%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
L+GH + VK+ ++ + S+D TIKVW+ G+ R LKGH + V + T
Sbjct: 102 LTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGN 161
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYNK--IKGN-APERLVSGSDDFTMFLWEPAV 348
L + + D T K + + + +K +N ++ + ++L+S S D T+ +WE A
Sbjct: 162 LLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAAT 221
Query: 349 SKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
KT + GH+ V + S DG +AS S D++IK WN G+ +A +R H V +
Sbjct: 222 GYCIKT-LVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECL 280
Query: 409 RFELIYCFRYPSNFYCVVDMSCCMSLYSWS---ADSRLLLSGSKDSTLKVWDIRTQKLKQ 465
F P + + + L +GS+D T+K+W++ T +
Sbjct: 281 AFSTANIIDIPGSLLSTPEGKSKVKQGPGGNLVGQCGYLATGSRDKTIKIWELATGRCLA 340
Query: 466 DLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
GH + V AV + P G+ + S G D+ +++W
Sbjct: 341 TYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVW 373
Score = 230 (86.0 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 78/290 (26%), Positives = 127/290 (43%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT AV + F G LAS S D T++LWD T + GH + V C+ ++ G
Sbjct: 143 TLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSG 202
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
L+S S+ ++ W+ TG L GH+ W+ I+ V + C S S D
Sbjct: 203 DQLISSSRDKTIKVWEAATGYCI-KTLVGHEDWVRKIT---VSEDGSC--IASCSNDQTI 256
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
+ W++ +C+ H+ V C+ + +I D + T +GK + +G G
Sbjct: 257 KTWNIVKGECLATYREHSHVVECLAFSTANII-----DIPGSLLSTPEGKS-KVKQGPG- 309
Query: 283 WVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAA-LERYNKIKGNA--P--ERLVSGSD 337
+L Y L TG+ D T K + A + N ++ P + L+S D
Sbjct: 310 --GNLVGQCGY-LATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGD 366
Query: 338 DFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
D T+ +W+ A + KT H ++ + F +A+ D IK+W
Sbjct: 367 DKTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVW 416
Score = 183 (69.5 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 52/170 (30%), Positives = 80/170 (47%)
Query: 345 EPAVSKQPKTR-MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
E A+ + P+ +TGH+ +N V F P + SAS D +IK+W+ +G+F +GH
Sbjct: 90 EDALPRPPEKHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTN 149
Query: 404 PVYQIRFE-----LIYCFR------YPSNFY-CVVDM---SCCMSLYSWSADSRLLLSGS 448
V I F+ L C + Y CV + +S ++ L+S S
Sbjct: 150 AVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSS 209
Query: 449 KDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+D T+KVW+ T + L GH D V + S DG +AS D+ +K W
Sbjct: 210 RDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTW 259
Score = 134 (52.2 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 29/84 (34%), Positives = 43/84 (51%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V V F+P G QL S S D T+++W+ T + GH++WV I S
Sbjct: 182 CVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVS 241
Query: 160 ADGKHLVSGSKAGELQCWDPQTGK 183
DG + S S ++ W+ G+
Sbjct: 242 EDGSCIASCSNDQTIKTWNIVKGE 265
Score = 125 (49.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 30/107 (28%), Positives = 56/107 (52%)
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGDA 222
+L +GS+ ++ W+ TG+ + GH W+ + + H PC +F+ S D
Sbjct: 318 YLATGSRDKTIKIWELATGRCLATYI-GHDNWVRAVRF---H---PCGKFLLSVGDDKTI 370
Query: 223 RIWDVSLRKCVICLS-GHTLAVTCVKWG-GDGVIYTGSQDCTIKVWE 267
R+WD++ +C+ ++ HT ++C+ + + I TG D IKVW+
Sbjct: 371 RVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVWK 417
Score = 120 (47.3 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 31/103 (30%), Positives = 50/103 (48%)
Query: 184 PSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV 243
P + L+GH+ I + + P VSAS+D ++WD + L GHT AV
Sbjct: 97 PEKHILTGHRNCINSVKFHPSF-----SLMVSASEDATIKVWDFESGEFERTLKGHTNAV 151
Query: 244 TCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVN 285
+ + G ++ + S D TIK+W+ ++ L GH H V+
Sbjct: 152 QDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVS 194
Score = 90 (36.7 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH + V + S DG +AS S D T++ W++ + H + V C+A+S
Sbjct: 224 CIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFS 283
Score = 89 (36.4 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 442 RLLLSGSKDSTLKVWDIRTQK-LKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+ LLS D T++VWDI + +K H + +D+ +A+GG D V+K+W
Sbjct: 359 KFLLSVGDDKTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVW 416
Score = 60 (26.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 25/102 (24%), Positives = 44/102 (43%)
Query: 374 WVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYP---SNFYCVVDMS- 429
++A+ S DK+IK+W TG+ +A + GH V +RF F V D++
Sbjct: 318 YLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQ 377
Query: 430 --CC----------MSLYSWSADSRLLLSGSKDSTLKVWDIR 459
C +S + + + +G D +KVW ++
Sbjct: 378 GRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVWKLQ 419
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 321 (118.1 bits), Expect = 1.4e-28, P = 1.4e-28
Identities = 94/303 (31%), Positives = 150/303 (49%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLW---DLNTQTPMFKCTGHKNWVLCIAWS 159
T+AGH+ A+ SV FSP+G LAS + D + +W D N + ++ GH + +AWS
Sbjct: 34 TLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLY---GHSLEISDVAWS 90
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
+D LVS S L+ WD ++GK L GH ++ + P P VS S D
Sbjct: 91 SDSSRLVSASDDKTLKVWDMRSGKCL-KTLKGHSDFVFCCDFNP-----PSNLIVSGSFD 144
Query: 220 GDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELK 278
+IW+V KC+ LS H+ ++ V + +G +I +GS D ++W+ G+ +R L
Sbjct: 145 ESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLA 204
Query: 279 GHGHW-VNSLALST--EYALRTGAFDHTGK--QYSSPEEMKKAA---LERY---NKIKGN 327
G+ V+ + S +Y L T D+T K YS +K E+Y
Sbjct: 205 DEGNPPVSFVKFSPNGKYIL-TATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVT 263
Query: 328 APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF--DKSIK 385
+ +VSGS+D +++W +K+ R+ GH +V P +ASA+ DK+IK
Sbjct: 264 GRKWVVSGSEDNMVYIWN-LQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIK 322
Query: 386 LWN 388
+W+
Sbjct: 323 VWS 325
Score = 235 (87.8 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 56/183 (30%), Positives = 96/183 (52%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH+ + VA+S D +L S S D T+++WD+ + + GH ++V C ++
Sbjct: 73 CKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFN 132
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
+VSGS ++ W+ +TGK LS H I+ +++ N VS S D
Sbjct: 133 PPSNLIVSGSFDESVKIWEVKTGKCL-KTLSAHSDPISAVNF-----NCNGSLIVSGSYD 186
Query: 220 GDARIWDVSLRKCVICLSGH-TLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIREL 277
G RIWD + +C+ L+ V+ VK+ +G I T + D T+K+W+ ++G+ ++
Sbjct: 187 GLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTY 246
Query: 278 KGH 280
GH
Sbjct: 247 TGH 249
Score = 220 (82.5 bits), Expect = 6.3e-16, P = 6.3e-16
Identities = 79/304 (25%), Positives = 134/304 (44%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L+GH I+ + + P N S++ D IW C L GH+L ++ V W
Sbjct: 35 LAGHSAAISSVKFSP---NGEW--LASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAW 89
Query: 249 GGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGK- 305
D + + S D T+KVW+ GK ++ LKGH +V + L +G+FD + K
Sbjct: 90 SSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKI 149
Query: 306 -QYSSPEEMK--KAALERYNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ + + +K A + + + N L VSGS D +W+ A + +T
Sbjct: 150 WEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNP 209
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSN 421
V+ V FSP+G+++ +A+ D ++KLW+ + G+ + + GH Y L F
Sbjct: 210 PVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYC----LFASFSVTGR 265
Query: 422 FYCVVDMSCCMSLYSWSADSRLL---LSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 478
+ VV S +Y W+ ++ + L G D + T+ + D+ V
Sbjct: 266 KW-VVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKV- 323
Query: 479 WSPD 482
WS D
Sbjct: 324 WSSD 327
Score = 198 (74.8 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 53/218 (24%), Positives = 104/218 (47%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T+ GH++ V F+P + SGS D +V++W++ T + + H + + + +
Sbjct: 114 KCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNF 173
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
+ +G +VSGS G + WD +G+ ++ + + P N + ++A+
Sbjct: 174 NCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSP---NG--KYILTATL 228
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCV----KWGGDGVIYTGSQDCTIKVWETTQGKLI 274
D ++WD S +C+ +GH C+ G + +GS+D + +W +++
Sbjct: 229 DNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIV 288
Query: 275 RELKGHGHWVNSLALS-TEYALRTGAF--DHTGKQYSS 309
+ L+GH V S A T+ + + A D T K +SS
Sbjct: 289 QRLQGHTDVVISAACHPTKNIIASAALENDKTIKVWSS 326
Score = 165 (63.1 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 42/158 (26%), Positives = 78/158 (49%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYC 415
+ GH ++ V FSP+G+W+AS++ D I +W G GH + + +
Sbjct: 35 LAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSS 94
Query: 416 FRYPSN---FYCVVDM---SCCMSL-----YSWSAD----SRLLLSGSKDSTLKVWDIRT 460
++ V DM C +L + + D S L++SGS D ++K+W+++T
Sbjct: 95 RLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKT 154
Query: 461 QKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
K + L H+D + AV+++ +G + SG D + ++W
Sbjct: 155 GKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIW 192
Score = 151 (58.2 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 48/185 (25%), Positives = 86/185 (46%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
E L S + D + +W A K + GH ++ V +S D + SAS DK++K+W+
Sbjct: 52 EWLASSAADALIIIWG-AYDGNCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDM 110
Query: 390 TTGKFVAVFRGHVGPVYQIRFE----LIYCFRYPSNFY--------CVVDMSCC---MSL 434
+GK + +GH V+ F LI + + C+ +S +S
Sbjct: 111 RSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISA 170
Query: 435 YSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADE-VFAVDWSPDGEKVASGGKDR 493
+++ + L++SGS D ++WD + + + L + V V +SP+G+ + + D
Sbjct: 171 VNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDN 230
Query: 494 VLKLW 498
LKLW
Sbjct: 231 TLKLW 235
Score = 150 (57.9 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 46/185 (24%), Positives = 89/185 (48%)
Query: 234 ICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE 292
+ L+GH+ A++ VK+ +G + + + D I +W G + L GH ++ +A S++
Sbjct: 33 LTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSD 92
Query: 293 YA-LRTGAFDHTGKQYSSPEEMKKAALERYNKI----KGNAPERL-VSGSDDFTMFLWEP 346
+ L + + D T K + L+ ++ N P L VSGS D ++ +WE
Sbjct: 93 SSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEV 152
Query: 347 AVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGP-V 405
K KT ++ H ++ V F+ +G + S S+D ++W+ +G+ + P V
Sbjct: 153 KTGKCLKT-LSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPV 211
Query: 406 YQIRF 410
++F
Sbjct: 212 SFVKF 216
Score = 101 (40.6 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 436 SWSADSRL-LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG--KD 492
S+S R ++SGS+D+ + +W+++T+++ Q L GH D V + P +AS D
Sbjct: 259 SFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALEND 318
Query: 493 RVLKLW 498
+ +K+W
Sbjct: 319 KTIKVW 324
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 305 (112.4 bits), Expect = 9.1e-27, P = 9.1e-27
Identities = 88/302 (29%), Positives = 142/302 (47%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
+TI GHT+++ +V FSP G+ L + S D TV++W+++ + TGHK V AWSAD
Sbjct: 73 STIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSAD 132
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
K +V+ S L+ ++ T K + L GH ++ ++ P VS S D
Sbjct: 133 SKSIVTASDDKTLKIYEVPTVKMA-KTLKGHTNYVFCCNFNP-----QSSLVVSGSFDES 186
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYT-GSQDCTIKVWETTQGKLIREL--- 277
RIWDV CV L H+ V+ V + DG + T GS D +++W+T G+ ++ L
Sbjct: 187 VRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDD 246
Query: 278 ----------KGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGN 327
+G ++ S L L T KQY E K ++ G
Sbjct: 247 ENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGG- 305
Query: 328 APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF--DKSIK 385
+ ++SGS+D +++W +K+ + GH Q V P +AS + D +I+
Sbjct: 306 --KWIISGSEDCKIYVWN-LQTKEVVQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIR 362
Query: 386 LW 387
+W
Sbjct: 363 IW 364
Score = 245 (91.3 bits), Expect = 2.7e-26, Sum P(2) = 2.7e-26
Identities = 68/238 (28%), Positives = 118/238 (49%)
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGDARIWDVSLRKCVICLS 237
P G + + GH K I+ + + +PC +F+ ++S D +IW++S C L+
Sbjct: 65 PGAGYKLISTIEGHTKSISAVKF------SPCGKFLGTSSADKTVKIWNMSDLSCERTLT 118
Query: 238 GHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR 296
GH L V W D I T S D T+K++E K+ + LKGH ++V + + +L
Sbjct: 119 GHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLV 178
Query: 297 -TGAFDHTGKQYSSPEEMKKAALERYNK----IKGNAPERLV-SGSDDFTMFLWEPAVSK 350
+G+FD + + + M L ++ + N L+ SGS D + +W+ A +
Sbjct: 179 VSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQ 238
Query: 351 QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
KT + V V FSP+G+++ S++ D ++KLW+ GK + ++GH Y I
Sbjct: 239 CVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCI 296
Score = 217 (81.4 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 56/209 (26%), Positives = 100/209 (47%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V A+S D + + + S D T++++++ T GH N+V C ++
Sbjct: 113 CERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFN 172
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
+VSGS ++ WD +TG L H ++ +S+ N S S D
Sbjct: 173 PQSSLVVSGSFDESVRIWDVRTGM-CVKTLPAHSDPVSAVSF-----NRDGSLITSGSYD 226
Query: 220 GDARIWDVSLRKCVICL-SGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIREL 277
G RIWD + +CV L V VK+ +G I + + D T+K+W+ +GK +++
Sbjct: 227 GLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQY 286
Query: 278 KGHGHWVNSLALSTEYALRTGAFDHTGKQ 306
+GH + N + +++ G + +G +
Sbjct: 287 QGHEN--NKYCIFANFSVTGGKWIISGSE 313
Score = 206 (77.6 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 51/190 (26%), Positives = 89/190 (46%)
Query: 96 PVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
P + + T+ GHT V F+P + SGS D +VR+WD+ T + H + V
Sbjct: 151 PTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSA 210
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
++++ DG + SGS G ++ WD G+ + + + + P N + +S
Sbjct: 211 VSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSP---NG--KYILS 265
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCV-----KWGGDGVIYTGSQDCTIKVWETTQ 270
++ D ++WD K + GH C+ GG +I +GS+DC I VW
Sbjct: 266 SNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWII-SGSEDCKIYVWNLQT 324
Query: 271 GKLIRELKGH 280
++++ L+GH
Sbjct: 325 KEVVQSLEGH 334
Score = 205 (77.2 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 67/270 (24%), Positives = 124/270 (45%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLN 207
GH + + +S GK L + S ++ W+ + L+GHK + +W +
Sbjct: 77 GHTKSISAVKFSPCGKFLGTSSADKTVKIWN-MSDLSCERTLTGHKLGVNDFAW-----S 130
Query: 208 APCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVW 266
A + V+AS D +I++V K L GHT V C + ++ +GS D ++++W
Sbjct: 131 ADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIW 190
Query: 267 ETTQGKLIRELKGHGHWVNSLALSTEYALRT-GAFDHTGKQYSSPE-EMKKAALERYN-- 322
+ G ++ L H V++++ + + +L T G++D + + + + K ++ N
Sbjct: 191 DVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPP 250
Query: 323 ----KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVY--FS-PDGQWV 375
K N + ++S + D T+ LW+ K K + GH+ ++ FS G+W+
Sbjct: 251 VAFVKFSPNG-KYILSSNLDNTLKLWDFGKGKTLK-QYQGHENNKYCIFANFSVTGGKWI 308
Query: 376 ASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
S S D I +WN T + V GH V
Sbjct: 309 ISGSEDCKIYVWNLQTKEVVQSLEGHTQAV 338
Score = 177 (67.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 66/244 (27%), Positives = 109/244 (44%)
Query: 256 TGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALST-EYALRTGAFDHTGKQYSSPEEMK 314
T SQ+ TI KLI ++GH ++++ S L T + D T K ++ +
Sbjct: 57 TTSQESTIP---GAGYKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSC 113
Query: 315 KAALERY----NKIKGNAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFS 369
+ L + N +A + +V+ SDD T+ ++E K KT + GH V F+
Sbjct: 114 ERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKT-LKGHTNYVFCCNFN 172
Query: 370 PDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE----LIYCFRYP------ 419
P V S SFD+S+++W+ TG V H PV + F LI Y
Sbjct: 173 PQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIW 232
Query: 420 --SNFYCVV----DMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADE 473
+N CV D + ++ +S + + +LS + D+TLK+WD K + GH +
Sbjct: 233 DTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENN 292
Query: 474 VFAV 477
+ +
Sbjct: 293 KYCI 296
Score = 166 (63.5 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 43/156 (27%), Positives = 80/156 (51%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----L 412
GH + ++ V FSP G+++ ++S DK++K+WN + GH V + +
Sbjct: 77 GHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSI 136
Query: 413 IYCFRYPS-NFYCVVDMSCCMSL-----Y----SWSADSRLLLSGSKDSTLKVWDIRTQK 462
+ + Y V + +L Y +++ S L++SGS D ++++WD+RT
Sbjct: 137 VTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGM 196
Query: 463 LKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+ LP H+D V AV ++ DG + SG D ++++W
Sbjct: 197 CVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIW 232
Score = 158 (60.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 51/183 (27%), Positives = 85/183 (46%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L + S D T+ +W + +T +TGH+ VN +S D + + +AS DK++K++ T
Sbjct: 94 LGTSSADKTVKIWNMSDLSCERT-LTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPT 152
Query: 392 GKFVAVFRGHVGPVYQIRFE----LIYCFRYPSNF--------YCVVDM---SCCMSLYS 436
K +GH V+ F L+ + + CV + S +S S
Sbjct: 153 VKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVS 212
Query: 437 WSADSRLLLSGSKDSTLKVWDIRT-QKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
++ D L+ SGS D +++WD Q +K + V V +SP+G+ + S D L
Sbjct: 213 FNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTL 272
Query: 496 KLW 498
KLW
Sbjct: 273 KLW 275
Score = 143 (55.4 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 34/125 (27%), Positives = 63/125 (50%)
Query: 389 GTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSN------FYCVVDMSCCMSL-------- 434
G K ++ GH + ++F F S+ + + D+SC +L
Sbjct: 66 GAGYKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVN 125
Query: 435 -YSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 493
++WSADS+ +++ S D TLK++++ T K+ + L GH + VF +++P V SG D
Sbjct: 126 DFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDE 185
Query: 494 VLKLW 498
+++W
Sbjct: 186 SVRIW 190
Score = 109 (43.4 bits), Expect = 2.7e-26, Sum P(2) = 2.7e-26
Identities = 22/71 (30%), Positives = 40/71 (56%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
C + +S + + ++SGS+D + VW+++T+++ Q L GH V A D P +ASG
Sbjct: 295 CIFANFSVTG-GKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQNMIASG 353
Query: 490 G--KDRVLKLW 498
D +++W
Sbjct: 354 ALEPDNTIRIW 364
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 327 (120.2 bits), Expect = 1.9e-25, Sum P(2) = 1.9e-25
Identities = 111/400 (27%), Positives = 182/400 (45%)
Query: 114 VAFSPDGRQLASGSGDTTVRLWDLNTQT---PMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
+AFSP LA G+ D TVRL+D+++ T + K GH + I +S G + S S+
Sbjct: 1789 LAFSPTQPLLAVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSITFSPSGNLIASTSE 1848
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR 230
++ W+ QT K H I IS+ P + C +S S D ++W
Sbjct: 1849 DLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPTN---ECE-LISCSDDYSTKVWSRFTT 1904
Query: 231 KCVICLSGHTLAVT-CVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLA 288
+ G T + CV + DG I T S+DC+I V+ + KL+ LKGH WVN
Sbjct: 1905 STTLSTEGSTNTIKHCV-YSPDGKYIATVSRDCSIAVYLCSSKKLLFRLKGHTDWVNFCT 1963
Query: 289 LSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA-----PERLVSGSDDFTMF 342
S + L +G +D + ++ + + L+ ++ A + ++S S D ++
Sbjct: 1964 FSPDSKKLVSGGWDFNLRVWNIKTQKELLCLKGHSSSIEKAFFTKDQKYIISASFDGSVK 2023
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQW-VASASFDKSIKLWNGTTGKFVAVFRGH 401
+W+ + T + HQ ++ V S D + S+S D IK W G +A GH
Sbjct: 2024 VWDAQFGSEI-TSLR-HQTRISDVVSSSDASGRIFSSSDDGIIKSWYPVAGSCLATLTGH 2081
Query: 402 VGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLS---GSKDSTLKVWDI 458
GP+ Q++F P++ S +S S+D+ + LS S D T+K+W+
Sbjct: 2082 SGPIKQVQFN-------PNSGGGGSSSFSSFSSFSSSSDAPVTLSIASSSDDGTVKLWEF 2134
Query: 459 RTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+ H + +S DG+ VA+ G+D VL +W
Sbjct: 2135 NSATATTS--AHKGSINQCVFSKDGKYVATCGQDCVLNIW 2172
Score = 227 (85.0 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 106/461 (22%), Positives = 184/461 (39%)
Query: 66 PLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPV--NRCSATIAGHTEAVLSVAFSPDGRQL 123
P SY HKV+ + + ++ + +P + C TI G + + +S DG +
Sbjct: 1480 PNKSYC--HKVAASESGGLKHKTWIEWLNKPQIKDSCKQTITGLEDGATACCYSRDGSMI 1537
Query: 124 ASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGK 183
AS D+ + ++ + + + GH NW+ C ++S DGK L S S + WD G
Sbjct: 1538 ASAGKDSIIHIFKASNGSELLTLVGHSNWISCFSFSDDGKTLASSSWDNTVIVWDLIVGN 1597
Query: 184 PSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL-SGHTLA 242
+ H + + + P N +S + D I++ S + S H+
Sbjct: 1598 QI-HQFKDHSRAVNYCEFSPTANNL----LMSCAWDSSIIIFNTSDKNIFRNFRSAHSKP 1652
Query: 243 VTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEY-ALRTGAF 300
V W DG +I + S D TIK+W LK H +++ S Y ++++ F
Sbjct: 1653 VNSCCWSPDGTLIASSSWDGTIKIWNPFDTIAKDRLK---HVIDA---SLSYGSIKSCKF 1706
Query: 301 DHTGKQYSSPEEMKKAAL------ERYNKIKGNAPER------------LVSGSDDFTMF 342
KQ + MK L ++ + GN + +V+GSDD T
Sbjct: 1707 SANSKQILATT-MKNDVLLFDVNSQKLISVMGNHSKSVNHCSLSNDGNYIVTGSDDATAK 1765
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN---GTTGKFVAVFR 399
+W + Q + N + FSP +A + D +++L++ T + VA
Sbjct: 1766 VWSSTLGTQLTNFLIPGDCWANCLAFSPTQPLLAVGATDCTVRLFDVSSNTIYREVAKLH 1825
Query: 400 GHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIR 459
GH + I F PS L+ S S+D +KVW+++
Sbjct: 1826 GHTRAITSITFS-------PSG--------------------NLIASTSEDLLIKVWNVQ 1858
Query: 460 TQKLKQDLP-GHADEVFAVDWSPDGE-KVASGGKDRVLKLW 498
T K + + H D + + ++P E ++ S D K+W
Sbjct: 1859 THKAEYTIEKAHNDPINCISFNPTNECELISCSDDYSTKVW 1899
Score = 195 (73.7 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 54/184 (29%), Positives = 85/184 (46%)
Query: 101 SATIA--GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
S T++ G T + +SPDG+ +A+ S D ++ ++ +++ +F+ GH +WV +
Sbjct: 1905 STTLSTEGSTNTIKHCVYSPDGKYIATVSRDCSIAVYLCSSKKLLFRLKGHTDWVNFCTF 1964
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
S D K LVSG L+ W+ +T K L GH I E + +SAS
Sbjct: 1965 SPDSKKLVSGGWDFNLRVWNIKTQKEL-LCLKGHSSSI-----EKAFFTKDQKYIISASF 2018
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD--GVIYTGSQDCTIKVWETTQGKLIRE 276
DG ++WD + L H ++ V D G I++ S D IK W G +
Sbjct: 2019 DGSVKVWDAQFGSEITSLR-HQTRISDVVSSSDASGRIFSSSDDGIIKSWYPVAGSCLAT 2077
Query: 277 LKGH 280
L GH
Sbjct: 2078 LTGH 2081
Score = 169 (64.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 47/153 (30%), Positives = 77/153 (50%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GHT+ V FSPD ++L SG D +R+W++ TQ + GH + + ++ D K
Sbjct: 1952 LKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELLCLKGHSSSIEKAFFTKDQK 2011
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+++S S G ++ WD Q G + L H+ T IS + V + R S+S DG +
Sbjct: 2012 YIISASFDGSVKVWDAQFGSEITS-LR-HQ---TRIS-DVVSSSDASGRIFSSSDDGIIK 2065
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKW----GGDG 252
W C+ L+GH+ + V++ GG G
Sbjct: 2066 SWYPVAGSCLATLTGHSGPIKQVQFNPNSGGGG 2098
Score = 135 (52.6 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 45/180 (25%), Positives = 71/180 (39%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD--GVIYTGSQDCTIKVWETTQG 271
+SAS DG ++WD + L H ++ V D G I++ S D IK W G
Sbjct: 2014 ISASFDGSVKVWDAQFGSEITSLR-HQTRISDVVSSSDASGRIFSSSDDGIIKSWYPVAG 2072
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPER 331
+ L GH + + + G + +SS A +
Sbjct: 2073 SCLATLTGHSGPIKQVQFNPNSG---GGGSSSFSSFSSFSSSSDAPVTL----------S 2119
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+ S SDD T+ LWE + H+ +N FS DG++VA+ D + +W+ T
Sbjct: 2120 IASSSDDGTVKLWE---FNSATATTSAHKGSINQCVFSKDGKYVATCGQDCVLNIWDAKT 2176
Score = 68 (29.0 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
S+S + + L G+ D T+++ DI + KL++ L + ++ + D ++ S DR L
Sbjct: 2326 SFSPNDKYLAIGTFDGTVELLDIASGKLRRILTTQVSSITSLKFL-DSTRLVSVSNDRSL 2384
Query: 496 KLW 498
+W
Sbjct: 2385 IVW 2387
Score = 60 (26.2 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 42/190 (22%), Positives = 67/190 (35%)
Query: 327 NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQW------------ 374
+A R+ S SDD + W P T +TGH + V F+P+
Sbjct: 2050 DASGRIFSSSDDGIIKSWYPVAGSCLAT-LTGHSGPIKQVQFNPNSGGGGSSSFSSFSSF 2108
Query: 375 -----------VASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFY 423
+AS+S D ++KLW + A H G + Q F +
Sbjct: 2109 SSSSDAPVTLSIASSSDDGTVKLWEFNSA--TATTSAHKGSINQC------VFSKDGKYV 2160
Query: 424 CVVDMSCCMSLYSWSADSRLLLSGSK-DSTLKVWDI-RTQKLKQDLPGHADEVFAVDWSP 481
C +++ W A + + L +S + R+ L L EV++ DW
Sbjct: 2161 ATCGQDCVLNI--WDAKTHINLKTMIFESPVTTCSFNRSGVLFIGLQDGTLEVYSKDWKT 2218
Query: 482 DGEKVASGGK 491
K + GK
Sbjct: 2219 VLHKEKTNGK 2228
Score = 52 (23.4 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 440 DSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 478
DS L+S S D +L VW+ T ++ + H + ++D
Sbjct: 2371 DSTRLVSVSNDRSLIVWNFSTSSIENEFI-HQSPITSMD 2408
Score = 50 (22.7 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 31/128 (24%), Positives = 52/128 (40%)
Query: 283 WVNSLALSTEY-ALRTGAFDHTGKQYS--SPEEMKKAALERYNKIKGNAP--ERLVSGSD 337
WV S+ ST L G+ K +S + + + Y +P + L G+
Sbjct: 2280 WVESVEFSTSGDLLAAGSRTKQVKIFSPLNDKPVTHQTSSSYVTSLSFSPNDKYLAIGTF 2339
Query: 338 DFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAV 397
D T+ L + A K + +T + + F D + S S D+S+ +WN +T
Sbjct: 2340 DGTVELLDIASGKLRRI-LTTQVSSITSLKFL-DSTRLVSVSNDRSLIVWNFSTSSIENE 2397
Query: 398 FRGHVGPV 405
F H P+
Sbjct: 2398 FI-HQSPI 2404
Score = 43 (20.2 bits), Expect = 1.9e-25, Sum P(2) = 1.9e-25
Identities = 8/27 (29%), Positives = 19/27 (70%)
Query: 472 DEVFAVDWSPDGEKVASGGKDRVLKLW 498
D V +V++S G+ +A+G + + +K++
Sbjct: 2279 DWVESVEFSTSGDLLAAGSRTKQVKIF 2305
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 292 (107.8 bits), Expect = 2.6e-25, P = 2.6e-25
Identities = 82/299 (27%), Positives = 142/299 (47%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT-GHKNWVLCIAWSADG 162
++GH AV ++ F+P G +ASGS D + LW ++ F GHKN +L + W++DG
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDG 108
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+VS S ++ WD +TGK ++ H ++ P P +S S DG A
Sbjct: 109 SQIVSASPDKTVRAWDVETGKQI-KKMAEHSSFVNSCC--PTRRGPPL--IISGSDDGTA 163
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHG 281
++WD+ R + +T V + I+TG D +KVW+ +G+ L+GH
Sbjct: 164 KLWDMRQRGAIQTFPDK-YQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQ 222
Query: 282 HWVNSLALSTEYA-LRTGAFDHT----GKQYSSPEEMKKAALERY------NKIKGN-AP 329
+ ++LS + + L T D+ + +P+ E + N +K + +P
Sbjct: 223 DTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSP 282
Query: 330 E--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
+ ++ +GS D + +W+ S++ ++ GH VN F P + S S DK+I L
Sbjct: 283 DGTKVTAGSSDRMVHIWD-TTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYL 340
Score = 184 (69.8 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 71/287 (24%), Positives = 124/287 (43%)
Query: 140 QTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ P+ +GH + V + ++ G + SGS E+ W + L GHK I +
Sbjct: 43 EAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDL 102
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVT--CVKWGGDGVIYTG 257
W + + VSAS D R WDV K + ++ H+ V C G +I +G
Sbjct: 103 HW-----TSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISG 157
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEY-ALRTGAFDHTGKQYSSPEEMKKA 316
S D T K+W+ Q I+ + + +++ S + TG D+ K + +
Sbjct: 158 SDDGTAKLWDMRQRGAIQTFPDK-YQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATM 216
Query: 317 ALERY-NKIKGNA--PER---LVSGSDDFTMFLWE--PAVSKQPKTRM-TGHQQLVNH-- 365
LE + + I G + P+ L +G D+ + +W+ P + ++ GHQ
Sbjct: 217 TLEGHQDTITGMSLSPDGSYLLTNGMDN-KLCVWDMRPYAPQNRCVKIFEGHQHNFEKNL 275
Query: 366 --VYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+SPDG V + S D+ + +W+ T+ + + GH G V + F
Sbjct: 276 LKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVF 322
Score = 165 (63.1 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 72/282 (25%), Positives = 112/282 (39%)
Query: 228 SLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQG-KLIRELKGHG---- 281
SL ++ LSGH AV +K+ G +I +GS D I +W K LKGH
Sbjct: 41 SLEAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAIL 100
Query: 282 --HWVN--SLALSTEYALRTGAFD-HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGS 336
HW + S +S A+D TGKQ E +G P ++SGS
Sbjct: 101 DLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRG--PPLIISGS 158
Query: 337 DDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVA 396
DD T LW+ +T +Q + V FS + + D +K+W+ G+
Sbjct: 159 DDGTAKLWDMRQRGAIQTFPDKYQ--ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATM 216
Query: 397 VFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVW 456
GH + + P Y + + L W D R ++ +K++
Sbjct: 217 TLEGHQDTITGMSLS-------PDGSYLLTN-GMDNKLCVW--DMRPY--APQNRCVKIF 264
Query: 457 DIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+ +++L WSPDG KV +G DR++ +W
Sbjct: 265 EGHQHNFEKNL-------LKCSWSPDGTKVTAGSSDRMVHIW 299
Score = 127 (49.8 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 30/99 (30%), Positives = 47/99 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT----GH-----KNWV 153
T+ GH + + ++ SPDG L + D + +WD+ P +C GH KN +
Sbjct: 217 TLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLL 276
Query: 154 LCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGH 192
C +WS DG + +GS + WD T + + L GH
Sbjct: 277 KC-SWSPDGTKVTAGSSDRMVHIWDT-TSRRTIYKLPGH 313
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 300 (110.7 bits), Expect = 2.7e-25, P = 2.7e-25
Identities = 83/315 (26%), Positives = 152/315 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD-G 162
+ H + +VA + G +GS D T +LWD + + GH+N V IA++ G
Sbjct: 88 LRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +GS + W +TGK + GH I +S+ P + S D A
Sbjct: 148 DKIATGSFDKTCKLWSVETGK-CYHTFRGHTAEIVCLSFNP-----QSTLVATGSMDTTA 201
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHG 281
++WD+ + V L+GH+ + + + G I TGS D T+ VWE G+ + L GH
Sbjct: 202 KLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHC 261
Query: 282 HWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALERYN-KIKGNAPE---RLVS-G 335
++S + + +L TG+ D T K + + A L ++ +I + + +L++
Sbjct: 262 AEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATA 321
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
S D T ++ A +++ T++ GH+ ++ + F+P G + + S DK+ ++W+ TG+ +
Sbjct: 322 SADGTARIFS-AATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCL 380
Query: 396 AVFRGHVGPVYQIRF 410
V GH ++ F
Sbjct: 381 QVLEGHTDEIFSCAF 395
Score = 286 (105.7 bits), Expect = 3.3e-23, P = 3.3e-23
Identities = 80/293 (27%), Positives = 137/293 (46%)
Query: 103 TIAGHTEAVLSVAFS-PDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
T+ GH V ++AF+ P G ++A+GS D T +LW + T GH ++C++++
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQ 188
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ +GS + WD Q+G+ L+GH I +S+ N R ++ S D
Sbjct: 189 STLVATGSMDTTAKLWDIQSGEEVFT-LTGHSAEIISLSF-----NTSGNRIITGSFDHT 242
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGH 280
+W+ + V L GH ++ + D +I TGS D T K+W+ GK + L GH
Sbjct: 243 VTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGH 302
Query: 281 GHWV-NSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY----NKIKGNAP-ERLVS 334
+ +S T + T + D T + +S+ LE + +KI N RL++
Sbjct: 303 DDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLT 362
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
GS D T +W+ A + Q + GH + F+ G + + S D + ++W
Sbjct: 363 GSSDKTARIWD-AQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 261 (96.9 bits), Expect = 4.3e-20, P = 4.3e-20
Identities = 66/254 (25%), Positives = 126/254 (49%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T GHT ++ ++F+P +A+GS DTT +LWD+ + +F TGH ++ +++
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSF 227
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
+ G +++GS + W+ TG+ L GH I+ + N C ++ S
Sbjct: 228 NTSGNRIITGSFDHTVTVWEADTGRKVYT-LIGHCAEISSAVF-----NWDCSLILTGSM 281
Query: 219 DGDARIWDVSLRKCVICLSGHTLAV--TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRE 276
D ++WD KCV L+GH + +C + G +I T S D T +++ + + +
Sbjct: 282 DKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGK-LIATASADGTARIFSAATRECVTK 340
Query: 277 LKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERY-NKIKGNA----PE 330
L+GH ++ ++ + + L TG+ D T + + + LE + ++I A +
Sbjct: 341 LEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGD 400
Query: 331 RLVSGSDDFTMFLW 344
+++GS D T +W
Sbjct: 401 IIITGSKDNTCRIW 414
Score = 207 (77.9 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 51/183 (27%), Positives = 86/183 (46%)
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGT 390
R+++GS D T+ +WE ++ T + GH ++ F+ D + + S DK+ KLW+
Sbjct: 233 RIITGSFDHTVTVWEADTGRKVYT-LIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAV 291
Query: 391 TGKFVAVFRGHVGPVYQIRFE----LIYCFRYP--SNFYCVVDMSCCMSL---------Y 435
GK VA GH + F+ LI + + C L
Sbjct: 292 NGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKI 351
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
S++ LL+GS D T ++WD +T + Q L GH DE+F+ ++ G+ + +G KD
Sbjct: 352 SFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTC 411
Query: 496 KLW 498
++W
Sbjct: 412 RIW 414
Score = 182 (69.1 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 50/182 (27%), Positives = 87/182 (47%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFS-PDGQWVASASFDKSIKLWNGTT 391
++GS D T LW+ A ++ T + GH+ +V + F+ P G +A+ SFDK+ KLW+ T
Sbjct: 108 ITGSYDRTCKLWDTASGEELHT-LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVET 166
Query: 392 GKFVAVFRGHVGPVYQIRFE----LI-----------YCFRYPSNFYCVVDMSCCMSLYS 436
GK FRGH + + F L+ + + + + S + S
Sbjct: 167 GKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLS 226
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
++ +++GS D T+ VW+ T + L GH E+ + ++ D + +G D+ K
Sbjct: 227 FNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCK 286
Query: 497 LW 498
LW
Sbjct: 287 LW 288
Score = 147 (56.8 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 38/159 (23%), Positives = 75/159 (47%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYC 415
+ H + +V + G + S+D++ KLW+ +G+ + GH VY I F Y
Sbjct: 88 LRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
Query: 416 FRYPSNFY---CV---VDMSCCMSLY----------SWSADSRLLLSGSKDSTLKVWDIR 459
+ + + C V+ C + S++ S L+ +GS D+T K+WDI+
Sbjct: 148 DKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQ 207
Query: 460 TQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+ + L GH+ E+ ++ ++ G ++ +G D + +W
Sbjct: 208 SGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVW 246
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 288 (106.4 bits), Expect = 7.3e-25, P = 7.3e-25
Identities = 86/303 (28%), Positives = 144/303 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT+++ S FSP G+ L + S D TV++W+++ TGHK V IAWS+D
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDS 141
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +VS S L+ ++ T + + L GH ++ ++ P VS S D
Sbjct: 142 RCVVSASDDKTLKIFEIVTSRMT-KTLKGHNNYVFCCNFNP-----QSSLVVSGSFDESV 195
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIREL---- 277
RIWDV C+ L H+ V+ V + DG +I +GS D +++W+T G+ I+ L
Sbjct: 196 RIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDE 255
Query: 278 ---------KGHGHWVNSLALSTEYALRTGAFDH--TGKQYSSPEEMKKAALERYNKIKG 326
+G ++ LA + + L+ F T KQY+ E K ++ G
Sbjct: 256 NPPVAFVKFSPNGKYI--LASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGG 313
Query: 327 NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF--DKSI 384
+ ++SGS+D +++W +++ + GH Q V P +AS + D I
Sbjct: 314 ---KWIISGSEDCKIYIWN-LQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKI 369
Query: 385 KLW 387
+W
Sbjct: 370 HIW 372
Score = 233 (87.1 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 66/262 (25%), Positives = 124/262 (47%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFV-SASKDGDARIWDVSLRKCVICLSGHTLAVTCVK 247
L GH K I+ + +PC +++ ++S D +IW++ C L+GH L V +
Sbjct: 83 LEGHTKSISSAKF------SPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
Query: 248 WGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGK 305
W D + + S D T+K++E ++ + LKGH ++V + + +L +G+FD + +
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 306 QYSSPEEMKKAALERYNK----IKGNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQ 360
+ M L ++ + N L+ SGS D + +W+ A + KT +
Sbjct: 197 IWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDEN 256
Query: 361 QLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPS 420
V V FSP+G+++ +++ D ++KLW+ + GK + + GH Y I F
Sbjct: 257 PPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFAN----FSVTG 312
Query: 421 NFYCVVDMSCCMSLYSWSADSR 442
+ + C +Y W+ +R
Sbjct: 313 GKWIISGSEDC-KIYIWNLQTR 333
Score = 225 (84.3 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 76/270 (28%), Positives = 119/270 (44%)
Query: 16 TDPEGNPL-GAPMYFPQ-NAGPQQLSQIVN-KLLNNEEKLPYAFYISDHELLVPLGSYLE 72
++P G P GA P NA S N KL+ E + IS + P G YL
Sbjct: 47 SNPTGTPAPGASAQTPNPNAAGASASGSANYKLMCTLEG--HTKSISSAKFS-PCGKYLG 103
Query: 73 KHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTV 132
S +K + I + C T+ GH V +A+S D R + S S D T+
Sbjct: 104 TS--SADKTVKIWNMDHMI--------CERTLTGHKLGVNDIAWSSDSRCVVSASDDKTL 153
Query: 133 RLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGH 192
+++++ T GH N+V C ++ +VSGS ++ WD +TG L H
Sbjct: 154 KIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCI-KTLPAH 212
Query: 193 KKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL-SGHTLAVTCVKWGGD 251
++ +S+ N S S DG RIWD + +C+ L V VK+ +
Sbjct: 213 SDPVSAVSF-----NRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPN 267
Query: 252 G-VIYTGSQDCTIKVWETTQGKLIRELKGH 280
G I + D T+K+W+ ++GK +++ GH
Sbjct: 268 GKYILASNLDSTLKLWDFSKGKTLKQYTGH 297
Score = 214 (80.4 bits), Expect = 8.3e-15, P = 8.3e-15
Identities = 69/273 (25%), Positives = 128/273 (46%)
Query: 146 CT--GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
CT GH + +S GK+L + S ++ W+ L+GHK + I+W
Sbjct: 81 CTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWN-MDHMICERTLTGHKLGVNDIAW-- 137
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
++ R VSAS D +I+++ + L GH V C + ++ +GS D +
Sbjct: 138 ---SSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDES 194
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPE-EMKKAALER 320
+++W+ G I+ L H V++++ + + +L +G++D + + + + K ++
Sbjct: 195 VRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDD 254
Query: 321 YNK----IKGNAPERLVSGSD-DFTMFLWEPAVSKQPKTRMTGHQQLVNHVY--FS-PDG 372
N +K + + + S+ D T+ LW+ + K K + TGH+ ++ FS G
Sbjct: 255 ENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLK-QYTGHENSKYCIFANFSVTGG 313
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
+W+ S S D I +WN T + V GH PV
Sbjct: 314 KWIISGSEDCKIYIWNLQTREIVQCLEGHTQPV 346
Score = 189 (71.6 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 56/197 (28%), Positives = 94/197 (47%)
Query: 322 NKIKGNAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF 380
N I ++ R +VS SDD T+ ++E S+ KT + GH V F+P V S SF
Sbjct: 133 NDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKT-LKGHNNYVFCCNFNPQSSLVVSGSF 191
Query: 381 DKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE----LIYCFRYP--------SNFYCVV-- 426
D+S+++W+ TG + H PV + F LI Y +N C+
Sbjct: 192 DESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTL 251
Query: 427 --DMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAV--DWSPD 482
D + ++ +S + + +L+ + DSTLK+WD K + GH + + + ++S
Sbjct: 252 VDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVT 311
Query: 483 GEK-VASGGKDRVLKLW 498
G K + SG +D + +W
Sbjct: 312 GGKWIISGSEDCKIYIW 328
Score = 166 (63.5 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 44/158 (27%), Positives = 81/158 (51%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFEL-IY 414
+ GH + ++ FSP G+++ ++S DK++K+WN GH V I +
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSR 142
Query: 415 CFRYPSN-----FYCVVDMSCCMSL-----Y----SWSADSRLLLSGSKDSTLKVWDIRT 460
C S+ + +V +L Y +++ S L++SGS D ++++WD++T
Sbjct: 143 CVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKT 202
Query: 461 QKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+ LP H+D V AV ++ DG +ASG D ++++W
Sbjct: 203 GMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIW 240
Score = 99 (39.9 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 21/71 (29%), Positives = 39/71 (54%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
C + +S + + ++SGS+D + +W+++T+++ Q L GH V A D P +ASG
Sbjct: 303 CIFANFSVTG-GKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASG 361
Query: 490 G--KDRVLKLW 498
D + +W
Sbjct: 362 ALEPDNKIHIW 372
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 288 (106.4 bits), Expect = 7.3e-25, P = 7.3e-25
Identities = 86/303 (28%), Positives = 144/303 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT+++ S FSP G+ L + S D TV++W+++ TGHK V IAWS+D
Sbjct: 82 TLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDS 141
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +VS S L+ ++ T + + L GH ++ ++ P VS S D
Sbjct: 142 RCVVSASDDKTLKIFEIVTSRMT-KTLKGHNNYVFCCNFNP-----QSSLVVSGSFDESV 195
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIREL---- 277
RIWDV C+ L H+ V+ V + DG +I +GS D +++W+T G+ I+ L
Sbjct: 196 RIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDE 255
Query: 278 ---------KGHGHWVNSLALSTEYALRTGAFDH--TGKQYSSPEEMKKAALERYNKIKG 326
+G ++ LA + + L+ F T KQY+ E K ++ G
Sbjct: 256 NPPVAFVKFSPNGKYI--LASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGG 313
Query: 327 NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF--DKSI 384
+ ++SGS+D +++W +++ + GH Q V P +AS + D I
Sbjct: 314 ---KWIISGSEDCKIYIWN-LQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKI 369
Query: 385 KLW 387
+W
Sbjct: 370 HIW 372
Score = 233 (87.1 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 66/262 (25%), Positives = 124/262 (47%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFV-SASKDGDARIWDVSLRKCVICLSGHTLAVTCVK 247
L GH K I+ + +PC +++ ++S D +IW++ C L+GH L V +
Sbjct: 83 LEGHTKSISSAKF------SPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
Query: 248 WGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGK 305
W D + + S D T+K++E ++ + LKGH ++V + + +L +G+FD + +
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 306 QYSSPEEMKKAALERYNK----IKGNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQ 360
+ M L ++ + N L+ SGS D + +W+ A + KT +
Sbjct: 197 IWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDEN 256
Query: 361 QLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPS 420
V V FSP+G+++ +++ D ++KLW+ + GK + + GH Y I F
Sbjct: 257 PPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFAN----FSVTG 312
Query: 421 NFYCVVDMSCCMSLYSWSADSR 442
+ + C +Y W+ +R
Sbjct: 313 GKWIISGSEDC-KIYIWNLQTR 333
Score = 225 (84.3 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 76/270 (28%), Positives = 119/270 (44%)
Query: 16 TDPEGNPL-GAPMYFPQ-NAGPQQLSQIVN-KLLNNEEKLPYAFYISDHELLVPLGSYLE 72
++P G P GA P NA S N KL+ E + IS + P G YL
Sbjct: 47 SNPTGTPAPGASAQTPNPNAAGASASGSANYKLMCTLEG--HTKSISSAKFS-PCGKYLG 103
Query: 73 KHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTV 132
S +K + I + C T+ GH V +A+S D R + S S D T+
Sbjct: 104 TS--SADKTVKIWNMDHMI--------CERTLTGHKLGVNDIAWSSDSRCVVSASDDKTL 153
Query: 133 RLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGH 192
+++++ T GH N+V C ++ +VSGS ++ WD +TG L H
Sbjct: 154 KIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCI-KTLPAH 212
Query: 193 KKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL-SGHTLAVTCVKWGGD 251
++ +S+ N S S DG RIWD + +C+ L V VK+ +
Sbjct: 213 SDPVSAVSF-----NRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPN 267
Query: 252 G-VIYTGSQDCTIKVWETTQGKLIRELKGH 280
G I + D T+K+W+ ++GK +++ GH
Sbjct: 268 GKYILASNLDSTLKLWDFSKGKTLKQYTGH 297
Score = 214 (80.4 bits), Expect = 8.3e-15, P = 8.3e-15
Identities = 69/273 (25%), Positives = 128/273 (46%)
Query: 146 CT--GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
CT GH + +S GK+L + S ++ W+ L+GHK + I+W
Sbjct: 81 CTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWN-MDHMICERTLTGHKLGVNDIAW-- 137
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
++ R VSAS D +I+++ + L GH V C + ++ +GS D +
Sbjct: 138 ---SSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDES 194
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPE-EMKKAALER 320
+++W+ G I+ L H V++++ + + +L +G++D + + + + K ++
Sbjct: 195 VRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDD 254
Query: 321 YNK----IKGNAPERLVSGSD-DFTMFLWEPAVSKQPKTRMTGHQQLVNHVY--FS-PDG 372
N +K + + + S+ D T+ LW+ + K K + TGH+ ++ FS G
Sbjct: 255 ENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLK-QYTGHENSKYCIFANFSVTGG 313
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
+W+ S S D I +WN T + V GH PV
Sbjct: 314 KWIISGSEDCKIYIWNLQTREIVQCLEGHTQPV 346
Score = 189 (71.6 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 56/197 (28%), Positives = 94/197 (47%)
Query: 322 NKIKGNAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF 380
N I ++ R +VS SDD T+ ++E S+ KT + GH V F+P V S SF
Sbjct: 133 NDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKT-LKGHNNYVFCCNFNPQSSLVVSGSF 191
Query: 381 DKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE----LIYCFRYP--------SNFYCVV-- 426
D+S+++W+ TG + H PV + F LI Y +N C+
Sbjct: 192 DESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTL 251
Query: 427 --DMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAV--DWSPD 482
D + ++ +S + + +L+ + DSTLK+WD K + GH + + + ++S
Sbjct: 252 VDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVT 311
Query: 483 GEK-VASGGKDRVLKLW 498
G K + SG +D + +W
Sbjct: 312 GGKWIISGSEDCKIYIW 328
Score = 166 (63.5 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 44/158 (27%), Positives = 81/158 (51%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFEL-IY 414
+ GH + ++ FSP G+++ ++S DK++K+WN GH V I +
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSR 142
Query: 415 CFRYPSN-----FYCVVDMSCCMSL-----Y----SWSADSRLLLSGSKDSTLKVWDIRT 460
C S+ + +V +L Y +++ S L++SGS D ++++WD++T
Sbjct: 143 CVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKT 202
Query: 461 QKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+ LP H+D V AV ++ DG +ASG D ++++W
Sbjct: 203 GMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIW 240
Score = 99 (39.9 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 21/71 (29%), Positives = 39/71 (54%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
C + +S + + ++SGS+D + +W+++T+++ Q L GH V A D P +ASG
Sbjct: 303 CIFANFSVTG-GKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASG 361
Query: 490 G--KDRVLKLW 498
D + +W
Sbjct: 362 ALEPDNKIHIW 372
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 288 (106.4 bits), Expect = 7.3e-25, P = 7.3e-25
Identities = 83/299 (27%), Positives = 139/299 (46%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT A+ V FS DG LAS S D T+ LW + + + GH + + +AWS+D
Sbjct: 38 TLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDS 97
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ S S L+ WD ++ L GH ++ +++ P P VS S D
Sbjct: 98 HYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNP-----PSNLIVSGSFDETI 152
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHG 281
RIW+V KCV + H++ ++ V + DG +I + S D + K+W+ +G ++ L
Sbjct: 153 RIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDK 212
Query: 282 HWVNSLALSTEYA--LRTGAFDHTGK--QYSSPEEMKKAALERYNKI-------KGNAPE 330
S A + + D T K Y++ + +K NK+ +
Sbjct: 213 SPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLK-VYTGHTNKVFCITSAFSVTNGK 271
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS--FDKSIKLW 387
+VSGS+D ++LW+ ++ R+ GH V V P ++S+ DK+I++W
Sbjct: 272 YIVSGSEDNCVYLWD-LQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
Score = 208 (78.3 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 70/280 (25%), Positives = 123/280 (43%)
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYT--GSQDCTIKVWETTQG- 271
SAS D +W + + GH+ ++ + W D YT S DCT+++W+
Sbjct: 60 SASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSH-YTCSASDDCTLRIWDARSPY 118
Query: 272 KLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPE----EMKKAALERYNKIKG 326
+ ++ L+GH ++V + + L +G+FD T + + M KA + +
Sbjct: 119 ECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHF 178
Query: 327 NAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
N L VS S D + +W+ KT + V+ FSP+G+++ A+ D ++K
Sbjct: 179 NRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLK 238
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLL 445
L N TGKF+ V+ GH V+ I F + Y +V S +Y W +R +L
Sbjct: 239 LSNYATGKFLKVYTGHTNKVFCITS----AFSVTNGKY-IVSGSEDNCVYLWDLQARNIL 293
Query: 446 SGSKDSTLKVWDIRTQKLKQDLPG---HADEVFAVDWSPD 482
+ T V + ++ ++ H D+ + W D
Sbjct: 294 QRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRI-WKQD 332
Score = 172 (65.6 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 49/203 (24%), Positives = 92/203 (45%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
++ R C + GHT V V F+P + SGS D T+R+W++ T + H
Sbjct: 111 IWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHS 170
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPC 210
+ + ++ DG +VS S G + WD + G + ++ + P N
Sbjct: 171 MPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSP---NG-- 225
Query: 211 RRFVS-ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG---GDG-VIYTGSQDCTIKV 265
+F+ A+ D ++ + + K + +GHT V C+ +G I +GS+D + +
Sbjct: 226 -KFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYL 284
Query: 266 WETTQGKLIRELKGHGHWVNSLA 288
W+ +++ L+GH V S++
Sbjct: 285 WDLQARNILQRLEGHTDAVISVS 307
Score = 156 (60.0 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 41/162 (25%), Positives = 78/162 (48%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFEL 412
KT + GH ++ V FS DG +ASAS DK++ LW+ T + + GH + + +
Sbjct: 37 KT-LEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSS 95
Query: 413 IYCFRYPSNFYCVVDMSCCMSLY----------------SWSADSRLLLSGSKDSTLKVW 456
+ ++ C + + S Y +++ S L++SGS D T+++W
Sbjct: 96 DSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIW 155
Query: 457 DIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+++T K + + H+ + +V ++ DG + S D K+W
Sbjct: 156 EVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIW 197
Score = 115 (45.5 bits), Expect = 0.00088, P = 0.00088
Identities = 21/71 (29%), Positives = 43/71 (60%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
C S +S + + + ++SGS+D+ + +WD++ + + Q L GH D V +V P +++S
Sbjct: 260 CITSAFSVT-NGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSS 318
Query: 490 GK--DRVLKLW 498
G D+ +++W
Sbjct: 319 GNHLDKTIRIW 329
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 306 (112.8 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 94/311 (30%), Positives = 142/311 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C + GH AVLSV++S D R LAS S D TV++WD T + GH + V + +S
Sbjct: 288 CLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFS 347
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
D + L S S + ++ WD TG + L GH+ W+ + + H + SAS D
Sbjct: 348 HDSRLLASASDS-TVKIWDTGTGSLQ-HTLEGHRDWVRSVIFS--H---DSQLLASASDD 400
Query: 220 GDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELK 278
+IWD L GH V V + D ++ + S D T+K+W+T G L L+
Sbjct: 401 STVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLE 460
Query: 279 GHGHWVNSLALSTEYALRTGAFD-HTGKQYSSPEEMKKAALERYNKIKGNAP----ERLV 333
GH WV S+ S + L A D T + + + + K LE ++ + + RL+
Sbjct: 461 GHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLL 520
Query: 334 -SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
S S+D T+ +W+ + R H F D + + FDK+ LW T
Sbjct: 521 ASASNDQTVRIWDI------EARSLQHT-------FDLDAT-IEAMRFDKATSLWIQVTV 566
Query: 393 KFVAVFRGHVG 403
K A R +G
Sbjct: 567 K--ASIRSAMG 575
Score = 248 (92.4 bits), Expect = 4.5e-18, P = 4.5e-18
Identities = 68/233 (29%), Positives = 103/233 (44%)
Query: 184 PSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV 243
P L GH+ + +S+ H R SAS D +IWD L GH+ V
Sbjct: 287 PCLQALEGHEAAVLSVSYS--H---DSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLV 341
Query: 244 TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDH- 302
V + D + + D T+K+W+T G L L+GH WV S+ S + L A D
Sbjct: 342 RSVIFSHDSRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDS 401
Query: 303 TGKQYSSPEEMKKAALERYNK-----IKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
T K + + + LE + I + + L S SDD T+ +W+ T +
Sbjct: 402 TVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHT-LE 460
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
GH+ V V FS D + +ASAS D+++++W+ G GH V + F
Sbjct: 461 GHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSF 513
Score = 167 (63.8 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 47/148 (31%), Positives = 70/148 (47%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L S SDD T+ +W+ T + GH+ V V FS D Q +ASAS D ++K+W+ T
Sbjct: 394 LASASDDSTVKIWDTGTGSLQHT-LEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGT 452
Query: 392 GKFVAVFRGHVGPVYQIRFE---------------LIYCFRYPSNFYCVVDMSCCMSLYS 436
G GH V + F I+ S+ + + S ++ S
Sbjct: 453 GSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVS 512
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLK 464
+S DSRLL S S D T+++WDI + L+
Sbjct: 513 FSHDSRLLASASNDQTVRIWDIEARSLQ 540
Score = 137 (53.3 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+S DS+LL S S DST+K+WD T L+ L GH D V +V +S D +AS DR ++
Sbjct: 429 FSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVR 488
Query: 497 LW 498
+W
Sbjct: 489 IW 490
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+S DS+LL S S DST+K+WD T L+ L GH D V +V +S D + +AS D +K
Sbjct: 387 FSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVK 446
Query: 497 LW 498
+W
Sbjct: 447 IW 448
Score = 134 (52.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 29/63 (46%), Positives = 39/63 (61%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
S+S DSRLL S S D T+K+WD T L+ L GH+D V +V +S D +AS D +
Sbjct: 303 SYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRLLASAS-DSTV 361
Query: 496 KLW 498
K+W
Sbjct: 362 KIW 364
Score = 132 (51.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 29/62 (46%), Positives = 39/62 (62%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+S DSRLL S S DST+K+WD T L+ L GH D V +V +S D + +AS D +K
Sbjct: 346 FSHDSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVK 404
Query: 497 LW 498
+W
Sbjct: 405 IW 406
Score = 123 (48.4 bits), Expect = 0.00028, P = 0.00028
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+S DSRLL S S D T+++WD K L GH+ V +V +S D +AS D+ ++
Sbjct: 471 FSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVR 530
Query: 497 LW 498
+W
Sbjct: 531 IW 532
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 294 (108.6 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 84/292 (28%), Positives = 135/292 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH +AV SV FS + +QLASGS D+ + +W + QT ++ GHK+ V C+ +S G L
Sbjct: 17 GHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLL 76
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
SGS+ ++ W P K H + VH + + FV+AS D ++W
Sbjct: 77 ASGSRDKTVRIWVPNV-KGESTVFRAHTATVRS-----VHFCSDGQSFVTASDDKTVKVW 130
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
+K + LS H V C K+ DG +I + S D T+K+W+ T + + HG +V
Sbjct: 131 STHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 190
Query: 285 NSLALSTE-YALRTGAFDHTGKQYS-------SPEEMKKAALERYN-KIKGNAPERLVSG 335
+ + D+T K + ++ AA+ + GN LV+
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY---LVTA 247
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GHQ V FS G++ AS D+ + +W
Sbjct: 248 SSDSTLKILDLMEGRLLYT-LHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 242 (90.2 bits), Expect = 6.7e-18, P = 6.7e-18
Identities = 59/205 (28%), Positives = 98/205 (47%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT V SV F DG+ + S D TV++W + Q +F + H NWV C +S
Sbjct: 96 STVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSP 155
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S ++ WD +T + + H ++T + + P + C +A D
Sbjct: 156 DGRLIVSASDDKTVKLWD-KTSRECVHSYCEHGGFVTYVDFHP---SGTC--IAAAGMDN 209
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
++WDV + + H+ AV + + G + T S D T+K+ + +G+L+ L G
Sbjct: 210 TVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHG 269
Query: 280 HGHWVNSLALSTEYALRTGAFDHTG 304
H ++A S RTG + +G
Sbjct: 270 HQGPATTVAFS-----RTGEYFASG 289
Score = 235 (87.8 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 71/218 (32%), Positives = 102/218 (46%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ ++P R + AGH +AV V FSP G LASGS D TVR+W N + H
Sbjct: 45 VWHMKPQTR-AYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHT 103
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPC 210
V + + +DG+ V+ S ++ W K + LS H W+ + P
Sbjct: 104 ATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFS-LSQHINWVRCAKFSP-----DG 157
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETT 269
R VSAS D ++WD + R+CV H VT V + G I D T+KVW+
Sbjct: 158 RLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 217
Query: 270 QGKLIRELKGHGHWVNSLAL--STEYALRTGAFDHTGK 305
+L++ + H VN+L+ S Y L T + D T K
Sbjct: 218 THRLLQHYQLHSAAVNALSFHPSGNY-LVTASSDSTLK 254
Score = 185 (70.2 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 57/185 (30%), Positives = 84/185 (45%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKT-RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
++L SGS D + +W + Q + R GH+ V V FSP G +AS S DK++++W
Sbjct: 32 KQLASGSMDSCLMVWH--MKPQTRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWV 89
Query: 389 GTTGKFVAVFRGHVGPVYQIRF-ELIYCFRYPSNFYCVVDMSCCMS--LYS------W-- 437
VFR H V + F F S+ V S L+S W
Sbjct: 90 PNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVR 149
Query: 438 ----SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 493
S D RL++S S D T+K+WD +++ H V VD+ P G +A+ G D
Sbjct: 150 CAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDN 209
Query: 494 VLKLW 498
+K+W
Sbjct: 210 TVKVW 214
Score = 170 (64.9 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 56/184 (30%), Positives = 84/184 (45%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
+ V+ SDD T+ +W K + ++ H V FSPDG+ + SAS DK++KLW+
Sbjct: 116 QSFVTASDDKTVKVWSTHRQKFLFS-LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK 174
Query: 390 TTGKFVAVFRGHVGPVYQIRFELI-YCFRYPS--NFYCVVDM------------SCCMSL 434
T+ + V + H G V + F C N V D+ S ++
Sbjct: 175 TSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNA 234
Query: 435 YSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
S+ L++ S DSTLK+ D+ +L L GH V +S GE ASGG D
Sbjct: 235 LSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQ 294
Query: 495 LKLW 498
+ +W
Sbjct: 295 VMVW 298
Score = 130 (50.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+S +++ L SGS DS L VW ++ Q GH D V V++SP G +ASG +D+ ++
Sbjct: 27 FSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVR 86
Query: 497 LWM 499
+W+
Sbjct: 87 IWV 89
Score = 116 (45.9 bits), Expect = 0.00096, P = 0.00096
Identities = 40/156 (25%), Positives = 65/156 (41%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----L 412
GH+ V V FS + + +AS S D + +W+ F GH V + F L
Sbjct: 17 GHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLL 76
Query: 413 IYCFRYPSNFYCVVDMSCCMSLYS----------WSADSRLLLSGSKDSTLKVWDIRTQK 462
R + V ++ +++ + +D + ++ S D T+KVW QK
Sbjct: 77 ASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQK 136
Query: 463 LKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L H + V +SPDG + S D+ +KLW
Sbjct: 137 FLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 172
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 285 (105.4 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 86/309 (27%), Positives = 143/309 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH +A+ SV FS + +QLASGS D+ +++W + Q + GHK+ V+C+ +S G HL
Sbjct: 18 GHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSG-HL 76
Query: 166 V-SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
V SGS+ + W P K H + VH ++ + V+AS D ++
Sbjct: 77 VASGSRDKTVCLWVPSV-KGESTVFKAHTATVRS-----VHFSSDGQSLVTASDDKTIKV 130
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
W V +K + LS H V C ++ DG +I + S D T+K+W+ T + I HG +
Sbjct: 131 WTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGF 190
Query: 284 VNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERY-------NKIKGN-APERLVS 334
N + + D T K + M + L+ Y N + + + L++
Sbjct: 191 ANHVEFHPSGTCIAAAGTDKTVKVWDV--RMNRL-LQHYQVHTAAVNSLSFHPSGNYLIT 247
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW--NGTTG 392
S+D T+ + + + T + GHQ V FS G + AS D+ + +W N +
Sbjct: 248 ASNDSTLKILDLLEGRLLYT-LHGHQGPATCVAFSRTGDFFASGGSDEQVMVWKTNFSAA 306
Query: 393 KFVAVFRGH 401
+ V + H
Sbjct: 307 DYDGVLKTH 315
Score = 244 (91.0 bits), Expect = 5.2e-20, P = 5.2e-20
Identities = 60/205 (29%), Positives = 98/205 (47%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT V SV FS DG+ L + S D T+++W ++ Q +F + H NWV C +S
Sbjct: 97 STVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSP 156
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ + S S ++ WD +T + + H + + + P + C +A D
Sbjct: 157 DGRLIASASDDKTVKLWD-KTSRECIHSFCEHGGFANHVEFHP---SGTC--IAAAGTDK 210
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
++WDV + + + HT AV + + G + T S D T+K+ + +G+L+ L G
Sbjct: 211 TVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHG 270
Query: 280 HGHWVNSLALSTEYALRTGAFDHTG 304
H +A S RTG F +G
Sbjct: 271 HQGPATCVAFS-----RTGDFFASG 290
Score = 223 (83.6 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 67/220 (30%), Positives = 105/220 (47%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLW--DLNTQTPMFKCTG 148
++ ++P R + GH +AV+ V FSP G +ASGS D TV LW + ++ +FK
Sbjct: 46 IWSMKPQMRAYCLV-GHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKA-- 102
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA 208
H V + +S+DG+ LV+ S ++ W K + LS H W+ + P
Sbjct: 103 HTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFS-LSQHINWVRCARFSP----- 156
Query: 209 PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
R SAS D ++WD + R+C+ H V++ G I D T+KVW+
Sbjct: 157 DGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWD 216
Query: 268 TTQGKLIRELKGHGHWVNSLAL--STEYALRTGAFDHTGK 305
+L++ + H VNSL+ S Y + T + D T K
Sbjct: 217 VRMNRLLQHYQVHTAAVNSLSFHPSGNYLI-TASNDSTLK 255
Score = 173 (66.0 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 57/185 (30%), Positives = 85/185 (45%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKT-RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
+ LV+ SDD T+ +W V +Q ++ H V FSPDG+ +ASAS DK++KLW+
Sbjct: 117 QSLVTASDDKTIKVW--TVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWD 174
Query: 389 GTTGKFVAVFRGHVGPVYQIRFELI-YCFRYPSNFYCV----VDMSCCMSLY-------- 435
T+ + + F H G + F C V V M+ + Y
Sbjct: 175 KTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVN 234
Query: 436 --SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 493
S+ L++ S DSTLK+ D+ +L L GH V +S G+ ASGG D
Sbjct: 235 SLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDE 294
Query: 494 VLKLW 498
+ +W
Sbjct: 295 QVMVW 299
Score = 171 (65.3 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 53/185 (28%), Positives = 84/185 (45%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTR-MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
++L SGS D + +W ++ Q + + GH+ V V FSP G VAS S DK++ LW
Sbjct: 33 KQLASGSMDSCLKIW--SMKPQMRAYCLVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWV 90
Query: 389 GTTGKFVAVFRGHVGPVYQIRFE-----LIYCFRYPS-NFYCVVDMSCCMSL---YSW-- 437
+ VF+ H V + F L+ + + V SL +W
Sbjct: 91 PSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVR 150
Query: 438 ----SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 493
S D RL+ S S D T+K+WD +++ H V++ P G +A+ G D+
Sbjct: 151 CARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDK 210
Query: 494 VLKLW 498
+K+W
Sbjct: 211 TVKVW 215
Score = 147 (56.8 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 45/156 (28%), Positives = 71/156 (45%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE----LI 413
GH+ + V FS + + +AS S D +K+W+ GH V ++F L+
Sbjct: 18 GHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGHLV 77
Query: 414 --------YCFRYPS-NFYCVVDMSCCMSLYS--WSADSRLLLSGSKDSTLKVWDIRTQK 462
C PS V + ++ S +S+D + L++ S D T+KVW + QK
Sbjct: 78 ASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQK 137
Query: 463 LKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L H + V +SPDG +AS D+ +KLW
Sbjct: 138 FLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLW 173
Score = 138 (53.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+S + + L SGS DS LK+W ++ Q L GH D V V +SP G VASG +D+ +
Sbjct: 28 FSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGHLVASGSRDKTVC 87
Query: 497 LWM 499
LW+
Sbjct: 88 LWV 90
Score = 119 (46.9 bits), Expect = 0.00029, P = 0.00029
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ +R +NR HT AV S++F P G L + S D+T+++ DL ++ GH+
Sbjct: 214 VWDVR-MNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQ 272
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCW 177
C+A+S G SG ++ W
Sbjct: 273 GPATCVAFSRTGDFFASGGSDEQVMVW 299
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 285 (105.4 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 83/292 (28%), Positives = 135/292 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH +AV V FS + +QLASGS D+ + +W + Q+ ++ TGHK+ V C+ +S G L
Sbjct: 48 GHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 107
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
SGS+ ++ W P K H + VH + + FV+AS D ++W
Sbjct: 108 ASGSRDKTVRIWVPNI-KGESTVFRAHTATVRS-----VHFCSDGQSFVTASDDKTIKVW 161
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
+K + LS H V C K+ DG +I + S D T+K+W+ T + + HG +V
Sbjct: 162 STHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 221
Query: 285 NSLALSTE-YALRTGAFDHTGKQYS-------SPEEMKKAALERYN-KIKGNAPERLVSG 335
+ + D+T K + ++ AA+ + GN LV+
Sbjct: 222 TYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY---LVTA 278
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GHQ V FS G++ AS D+ + +W
Sbjct: 279 SSDSTLKILDLMEGRLLYT-LHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 329
Score = 240 (89.5 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 58/205 (28%), Positives = 98/205 (47%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT V SV F DG+ + S D T+++W + Q +F + H NWV C +S
Sbjct: 127 STVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSP 186
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S ++ WD +T + + H ++T + + P + C +A D
Sbjct: 187 DGRLIVSASDDKTVKLWD-KTSRECVHSYCEHGGFVTYVDFHP---SGTC--VAAAGMDN 240
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
++WDV + + H+ AV + + G + T S D T+K+ + +G+L+ L G
Sbjct: 241 TVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHG 300
Query: 280 HGHWVNSLALSTEYALRTGAFDHTG 304
H ++A S RTG + +G
Sbjct: 301 HQGPATTVAFS-----RTGEYFASG 320
Score = 189 (71.6 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 58/185 (31%), Positives = 85/185 (45%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKT-RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
++L SGS D + +W + Q + R TGH+ V V FSP G +AS S DK++++W
Sbjct: 63 KQLASGSMDSCLMVWH--MKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWV 120
Query: 389 GTTGKFVAVFRGHVGPVYQIRF-ELIYCFRYPSNFYCVVDMSCCMS--LYS------W-- 437
VFR H V + F F S+ + S L+S W
Sbjct: 121 PNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVR 180
Query: 438 ----SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 493
S D RL++S S D T+K+WD +++ H V VD+ P G VA+ G D
Sbjct: 181 CAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDN 240
Query: 494 VLKLW 498
+K+W
Sbjct: 241 TVKVW 245
Score = 169 (64.5 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 56/184 (30%), Positives = 84/184 (45%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
+ V+ SDD T+ +W K + ++ H V FSPDG+ + SAS DK++KLW+
Sbjct: 147 QSFVTASDDKTIKVWSTHRQKFLFS-LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK 205
Query: 390 TTGKFVAVFRGHVGPVYQIRFELI-YCFRYPS--NFYCVVDM------------SCCMSL 434
T+ + V + H G V + F C N V D+ S ++
Sbjct: 206 TSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNA 265
Query: 435 YSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
S+ L++ S DSTLK+ D+ +L L GH V +S GE ASGG D
Sbjct: 266 LSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQ 325
Query: 495 LKLW 498
+ +W
Sbjct: 326 VMVW 329
Score = 128 (50.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+S + + L SGS DS L VW ++ Q GH D V V++SP G +ASG +D+ ++
Sbjct: 58 FSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVR 117
Query: 497 LWM 499
+W+
Sbjct: 118 IWV 120
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 284 (105.0 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 72/206 (34%), Positives = 102/206 (49%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+AGH V S FSPDGR +AS S D ++RLWD+ + GH+ V +++S D K
Sbjct: 64 LAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSK 123
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L SG W+ Q+G+ + L GH I + P + + S D
Sbjct: 124 QLASGGWDKRAIVWEVQSGRRV-HLLVGHCDSIQSSDFSPTSDS-----LATGSWDSTVH 177
Query: 224 IWDVSLRKCVIC---LSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
IWD+ V+ L GHT ++C+ + G++ +GS D TI VW+ T L +LKGH
Sbjct: 178 IWDLRASTPVVSYHNLEGHTGNISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQLKGH 237
Query: 281 GHWVNSLALST-EYALRTGAFDHTGK 305
WVNSLA S E L + + T K
Sbjct: 238 TIWVNSLAFSPDELKLASAGYSRTVK 263
Score = 275 (101.9 bits), Expect = 2.0e-23, P = 2.0e-23
Identities = 78/261 (29%), Positives = 122/261 (46%)
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA 208
H V C A+S DG+ L++ S G + W ++G+ L+GH+ + + P
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWR-LAGHRGPVKSCCFSP----- 78
Query: 209 PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
R S+S D R+WDV+ KC+ L GH +V V + D + +G D VWE
Sbjct: 79 DGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWE 138
Query: 268 TTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG 326
G+ + L GH + S S T +L TG++D T + + G
Sbjct: 139 VQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTG 198
Query: 327 N-------APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
N A L SGS D T+ +W+P + P ++ GH VN + FSPD +ASA
Sbjct: 199 NISCLCYSASGLLASGSWDKTICVWKPTTNNLP-LQLKGHTIWVNSLAFSPDELKLASAG 257
Query: 380 FDKSIKLWNGTTGKFVAVFRG 400
+ +++K+W+ TGK + +G
Sbjct: 258 YSRTVKVWDCLTGKCLETLKG 278
Score = 215 (80.7 bits), Expect = 8.3e-16, P = 8.3e-16
Identities = 73/283 (25%), Positives = 129/283 (45%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLV 166
H E S AFSPDGR L + S D V +W + +++ GH+ V +S DG+ +
Sbjct: 26 HGEVNCS-AFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIA 84
Query: 167 SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD 226
S S ++ WD K + L GH++ + +S+ P ++ S D A +W+
Sbjct: 85 SSSSDHSIRLWDVARSKCL-HVLKGHQRSVETVSFSP-----DSKQLASGGWDKRAIVWE 138
Query: 227 VSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWE---TTQGKLIRELKGHGH 282
V + V L GH ++ + + TGS D T+ +W+ +T L+GH
Sbjct: 139 VQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTG 198
Query: 283 WVNSLALSTEYALRTGAFDHT---GKQYSS--PEEMKKAALERYNKIKGNAPE-RLVSGS 336
++ L S L +G++D T K ++ P ++K + N + + E +L S
Sbjct: 199 NISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIW-VNSLAFSPDELKLASAG 257
Query: 337 DDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
T+ +W+ K +T + G + + F+PDG+ + S +
Sbjct: 258 YSRTVKVWDCLTGKCLET-LKGMLDVAHACIFTPDGKLLVSGA 299
Score = 188 (71.2 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 51/185 (27%), Positives = 85/185 (45%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
++C + GH +V +V+FSPD +QLASG D +W++ + + GH + +
Sbjct: 100 SKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSD 159
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKP--SGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+S L +GS + WD + P S + L GH I+ + + L A S
Sbjct: 160 FSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASGLLA------S 213
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLI 274
S D +W + + L GHT+ V + + D + + + T+KVW+ GK +
Sbjct: 214 GSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCL 273
Query: 275 RELKG 279
LKG
Sbjct: 274 ETLKG 278
Score = 171 (65.3 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 54/209 (25%), Positives = 99/209 (47%)
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETT 269
R ++AS DG +W + + L+GH V + DG +I + S D +I++W+
Sbjct: 39 RTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVA 98
Query: 270 QGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERY-NKIKGN 327
+ K + LKGH V +++ S + L +G +D + + L + + I+ +
Sbjct: 99 RSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSS 158
Query: 328 --AP--ERLVSGSDDFTMFLWEPAVSKQPKT--RMTGHQQLVNHVYFSPDGQWVASASFD 381
+P + L +GS D T+ +W+ S + + GH ++ + +S G +AS S+D
Sbjct: 159 DFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASGL-LASGSWD 217
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
K+I +W TT +GH V + F
Sbjct: 218 KTICVWKPTTNNLPLQLKGHTIWVNSLAF 246
Score = 170 (64.9 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 66/275 (24%), Positives = 113/275 (41%)
Query: 239 HTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL-R 296
H V C + DG + T S D + VW T G+L+ L GH V S S + L
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIA 84
Query: 297 TGAFDHTGKQYSSPEEMKKAALERYNKIKGN---APE--RLVSGSDDFTMFLWEPAVSKQ 351
+ + DH+ + + L+ + + +P+ +L SG D +WE ++
Sbjct: 85 SSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRR 144
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFR---GHVGPV--- 405
+ GH + FSP +A+ S+D ++ +W+ V + GH G +
Sbjct: 145 VHL-LVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCL 203
Query: 406 -YQIR-------FELIYCFRYPSNFYCVVDM---SCCMSLYSWSADSRLLLSGSKDSTLK 454
Y ++ C P+ + + + ++ ++S D L S T+K
Sbjct: 204 CYSASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVK 263
Query: 455 VWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
VWD T K + L G D A ++PDG+ + SG
Sbjct: 264 VWDCLTGKCLETLKGMLDVAHACIFTPDGKLLVSG 298
Score = 153 (58.9 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 47/162 (29%), Positives = 73/162 (45%)
Query: 353 KTRMTG-HQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE 411
+ R G H VN FSPDG+ + +AS D + +W +G+ + GH GPV F
Sbjct: 18 RVRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFS 77
Query: 412 ----LIYCFR--YPSNFYCVVDMSCCMSL---------YSWSADSRLLLSGSKDSTLKVW 456
LI + + V C L S+S DS+ L SG D VW
Sbjct: 78 PDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVW 137
Query: 457 DIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
++++ + L GH D + + D+SP + +A+G D + +W
Sbjct: 138 EVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIW 179
Score = 115 (45.5 bits), Expect = 0.00073, P = 0.00073
Identities = 29/67 (43%), Positives = 38/67 (56%)
Query: 432 MSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGK 491
+S +SA S LL SGS D T+ VW T L L GH V ++ +SPD K+AS G
Sbjct: 200 ISCLCYSA-SGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGY 258
Query: 492 DRVLKLW 498
R +K+W
Sbjct: 259 SRTVKVW 265
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 239 (89.2 bits), Expect = 4.2e-24, Sum P(2) = 4.2e-24
Identities = 69/230 (30%), Positives = 118/230 (51%)
Query: 103 TIAGHTEAVLSVAFSPDGRQ-LASGSGDTTVRLWDLNTQTPMF-----KCTGHKNWVLCI 156
T+ HT+ V ++A D + + S D ++ LW L + + + TGH ++V +
Sbjct: 10 TMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDV 69
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
S+DG+ +SGS GEL+ WD TG+ S GH K + +++ + R+ VSA
Sbjct: 70 VLSSDGQFALSGSWDGELRLWDLATGE-STRRFVGHTKDVLSVAFSTDN-----RQIVSA 123
Query: 217 SKDGDARIWDVSLRKCVICLS---GHTLAVTCVKWGGDGVIYT---GSQDCTIKVWETTQ 270
S+D ++W+ +L +C +S GH V+CV++ + ++ T S D T+KVW
Sbjct: 124 SRDRTIKLWN-TLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQN 182
Query: 271 GKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALE 319
KL L GH ++N++A+S + +L +G D + E K +LE
Sbjct: 183 CKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLE 232
Score = 232 (86.7 bits), Expect = 7.1e-22, Sum P(2) = 7.1e-22
Identities = 59/189 (31%), Positives = 96/189 (50%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D +RLWDL T + GH VL +A+S D +
Sbjct: 59 MTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNR 118
Query: 164 HLVSGSKAGELQCWDPQTG-KPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+VS S+ ++ W+ K + + GHK+W++ + + P N VSAS D
Sbjct: 119 QIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSP---NTLVPTIVSASWDKTV 175
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHG 281
++W++ K L+GH+ + V DG + +G +D I +W+ +GK + L+ G
Sbjct: 176 KVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA-G 234
Query: 282 HWVNSLALS 290
++SL S
Sbjct: 235 SIIHSLCFS 243
Score = 179 (68.1 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 89/333 (26%), Positives = 146/333 (43%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW-----DVSLRKCVICLSGHTLAV 243
+ H +T I+ PV N+ V++S+D +W D S ++GH+ V
Sbjct: 11 MCAHTDMVTAIA-TPVD-NSDV--IVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
V DG +GS D +++W+ G+ R GH V S+A ST+ + + + D
Sbjct: 67 QDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRD 126
Query: 302 HTGKQYSSPEEMKKAALE-----RYNKIKGNAPERLV----SGSDDFTMFLWEPAVSKQP 352
T K +++ E K E + +P LV S S D T+ +W K
Sbjct: 127 RTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLR 186
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFEL 412
T + GH +N V SPDG AS D I LW+ GK ++ G +
Sbjct: 187 NT-LAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK--KLYSLEAGSIIHS---- 239
Query: 413 IYCFRYPSNFY-CVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP--- 468
CF P+ ++ C + S+ W +S+ ++ +D LKV D++ + K D
Sbjct: 240 -LCFS-PNRYWLCAATEN---SIRIWDLESKSVV---ED--LKV-DLKAEAEKTDGSTGI 288
Query: 469 GHADEVF---AVDWSPDGEKVASGGKDRVLKLW 498
G+ +V +++WS DG + SG D V+++W
Sbjct: 289 GNKTKVIYCTSLNWSADGNTLFSGYTDGVIRVW 321
Score = 71 (30.1 bits), Expect = 4.2e-24, Sum P(2) = 4.2e-24
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKVWDI 458
C SL +WSAD L SG D ++VW I
Sbjct: 297 CTSL-NWSADGNTLFSGYTDGVIRVWGI 323
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 299 (110.3 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 88/297 (29%), Positives = 139/297 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I+GH V ++A PD + ASG+GD T+++WDL + TGH + V +A S
Sbjct: 197 ISGHLGWVRALAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAVSPRHP 256
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S ++ ++CWD +T K + GH + ++ P L+ V+ +DG AR
Sbjct: 257 YLFSCAEDKMVKCWDLETNKVIRH-YHGHLSGVYTLALHPT-LDV----LVTGGRDGVAR 310
Query: 224 IWDVSLRKCVICLSGHTLAVT-CVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
+WD+ R + LSGHT V+ V D + TGS D T+++W+ GK + L H
Sbjct: 311 VWDMRTRSNIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMGVLTHHKK 370
Query: 283 WVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----NAPERLVSGSD 337
V +LA TE+ +G+ KQ+ PE E +N I N SG+D
Sbjct: 371 GVRALATHPTEFTFASGSAGSI-KQWKCPEGAFMQNFEGHNSIINTLSVNDQNVFFSGAD 429
Query: 338 DFTMFLWEPAVSKQ----PKTRMTGHQQLVNHVY---FSPDGQWVASASFDKSIKLW 387
+ +M W+ + T G Q + ++ F G + DK+IK+W
Sbjct: 430 NGSMSFWDWKTGHRFQSLDTTAQPGSLQAESGIFTSTFDQSGSRLICGEADKTIKIW 486
Score = 204 (76.9 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 68/269 (25%), Positives = 120/269 (44%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
R T+ GH V +A SP L S + D V+ WDL T + GH + V +A
Sbjct: 234 RLRLTLTGHISTVRGLAVSPRHPYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLAL 293
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
LV+G + G + WD +T + + + LSGH TG E V A + ++ S
Sbjct: 294 HPTLDVLVTGGRDGVARVWDMRT-RSNIHVLSGH----TGTVSELVCQEAD-PQVITGSL 347
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
D R+WD++ K + L+ H V + + +IK W+ +G ++ +
Sbjct: 348 DSTVRMWDLAAGKTMGVLTHHKKGVRALATHPTEFTFASGSAGSIKQWKCPEGAFMQNFE 407
Query: 279 GHGHWVNSLALSTEYALRTGA-------FD-HTGKQYSSPEEMKK-AALER----YNKIK 325
GH +N+L+++ + +GA +D TG ++ S + + +L+ +
Sbjct: 408 GHNSIINTLSVNDQNVFFSGADNGSMSFWDWKTGHRFQSLDTTAQPGSLQAESGIFTSTF 467
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKT 354
+ RL+ G D T+ +W+ + P+T
Sbjct: 468 DQSGSRLICGEADKTIKIWKEDMEATPET 496
Score = 167 (63.8 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 58/220 (26%), Positives = 97/220 (44%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ ++ EP + + F S + D +IWD++ + + L+GH V +
Sbjct: 197 ISGHLGWVRALAVEPDN-----KWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAV 251
Query: 249 GG-DGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ ++D +K W+ K+IR GH V +LAL T L TG D +
Sbjct: 252 SPRHPYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGVARV 311
Query: 307 YSSPEEMKKAALERYNK-----IKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ L + + A ++++GS D T+ +W+ A K +T H++
Sbjct: 312 WDMRTRSNIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMGV-LTHHKK 370
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
V + P AS S SIK W G F+ F GH
Sbjct: 371 GVRALATHPTEFTFASGSAG-SIKQWKCPEGAFMQNFEGH 409
Score = 142 (55.0 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 49/181 (27%), Positives = 82/181 (45%)
Query: 334 SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK 393
SG+ D T+ +W+ A S + + +TGH V + SP ++ S + DK +K W+ T K
Sbjct: 218 SGAGDRTIKIWDLA-SGRLRLTLTGHISTVRGLAVSPRHPYLFSCAEDKMVKCWDLETNK 276
Query: 394 FVAVFRGHVGPVYQIRFE---------------LIYCFRYPSNFYCVVDMSCCMS-LYSW 437
+ + GH+ VY + ++ R SN + + + +S L
Sbjct: 277 VIRHYHGHLSGVYTLALHPTLDVLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVSELVCQ 336
Query: 438 SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKL 497
AD +++ +GS DST+++WD+ K L H V A+ P ASG + K
Sbjct: 337 EADPQVI-TGSLDSTVRMWDLAAGKTMGVLTHHKKGVRALATHPTEFTFASGSAGSI-KQ 394
Query: 498 W 498
W
Sbjct: 395 W 395
Score = 138 (53.6 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 42/162 (25%), Positives = 70/162 (43%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYC 415
++GH V + PD +W AS + D++IK+W+ +G+ GH+ V +
Sbjct: 197 ISGHLGWVRALAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAVSP--- 253
Query: 416 FRYPSNFYCVVD-MSCCMSL----------------YSWSADSRL--LLSGSKDSTLKVW 456
R+P F C D M C L Y+ + L L++G +D +VW
Sbjct: 254 -RHPYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGVARVW 312
Query: 457 DIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
D+RT+ L GH V + +V +G D +++W
Sbjct: 313 DMRTRSNIHVLSGHTGTVSELVCQEADPQVITGSLDSTVRMW 354
Score = 68 (29.0 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 17/67 (25%), Positives = 31/67 (46%)
Query: 440 DSRLLLSGSKDSTLKVWDIRTQKLKQDL-----PG--HADE-VFAVDWSPDGEKVASGGK 491
D + SG+ + ++ WD +T Q L PG A+ +F + G ++ G
Sbjct: 420 DQNVFFSGADNGSMSFWDWKTGHRFQSLDTTAQPGSLQAESGIFTSTFDQSGSRLICGEA 479
Query: 492 DRVLKLW 498
D+ +K+W
Sbjct: 480 DKTIKIW 486
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 280 (103.6 bits), Expect = 5.7e-24, P = 5.7e-24
Identities = 79/292 (27%), Positives = 135/292 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH +AV V FS + + LASGS D+T+ +W + Q+ ++ TGHK+ V C+ +S G L
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
SGS+ ++ W P K H + VH + + V+AS D ++W
Sbjct: 77 ASGSRDKTVRIWVPNV-KGESTVFRAHTATVRS-----VHFCSDGQLLVTASDDKTVKVW 130
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
++ + L+ H V C K+ DG +I + S D T+K+W+ T + + HG +V
Sbjct: 131 STHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 190
Query: 285 NSLALSTE-YALRTGAFDHTGKQYSSPE-------EMKKAALERYN-KIKGNAPERLVSG 335
+ + D+T K + + ++ AA+ + GN L++
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNY---LITA 247
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GHQ V FS G++ AS D+ + +W
Sbjct: 248 SSDSTLKILDLMEGRLLYT-LHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 247 (92.0 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 61/205 (29%), Positives = 98/205 (47%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT V SV F DG+ L + S D TV++W + Q +F T H NWV C +S
Sbjct: 96 STVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSP 155
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S ++ WD +T + + H ++T + + P + C +A D
Sbjct: 156 DGRLIVSASDDKTVKLWD-KTSRECVHSYCEHGGFVTYVDFHP---SGTC--IAAAGMDN 209
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
++WD + V H+ AV + + G + T S D T+K+ + +G+L+ L G
Sbjct: 210 TVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHG 269
Query: 280 HGHWVNSLALSTEYALRTGAFDHTG 304
H ++A S RTG + +G
Sbjct: 270 HQGPATTVAFS-----RTGEYFASG 289
Score = 197 (74.4 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 56/185 (30%), Positives = 84/185 (45%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKT-RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
+ L SGS D T+ +W + Q + R TGH+ V V FSP G +AS S DK++++W
Sbjct: 32 KHLASGSMDSTLMIWH--MKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWV 89
Query: 389 GTTGKFVAVFRGHVGPVYQIRF----ELIYCFRYPSNF--YCVVDMSCCMSL---YSW-- 437
VFR H V + F +L+ + SL +W
Sbjct: 90 PNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVR 149
Query: 438 ----SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 493
S D RL++S S D T+K+WD +++ H V VD+ P G +A+ G D
Sbjct: 150 CAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDN 209
Query: 494 VLKLW 498
+K+W
Sbjct: 210 TVKVW 214
Score = 174 (66.3 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 57/182 (31%), Positives = 83/182 (45%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
LV+ SDD T+ +W ++ +T H V FSPDG+ + SAS DK++KLW+ T+
Sbjct: 118 LVTASDDKTVKVWSTH-RQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTS 176
Query: 392 GKFVAVFRGHVGPVYQIRFELI-YCFRYPS--NFYCVVDM------------SCCMSLYS 436
+ V + H G V + F C N V D S ++ S
Sbjct: 177 RECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALS 236
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+ L++ S DSTLK+ D+ +L L GH V +S GE ASGG D +
Sbjct: 237 FHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM 296
Query: 497 LW 498
+W
Sbjct: 297 VW 298
Score = 135 (52.6 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+S +++ L SGS DSTL +W ++ Q GH D V V++SP G +ASG +D+ ++
Sbjct: 27 FSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVR 86
Query: 497 LWM 499
+W+
Sbjct: 87 IWV 89
Score = 125 (49.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 41/156 (26%), Positives = 68/156 (43%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----L 412
GH+ V V FS + + +AS S D ++ +W+ F GH V + F L
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 413 IYCFRYPSNFYCVVDMSCCMSLYS----------WSADSRLLLSGSKDSTLKVWDIRTQK 462
R + V ++ +++ + +D +LL++ S D T+KVW Q+
Sbjct: 77 ASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQR 136
Query: 463 LKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L H + V +SPDG + S D+ +KLW
Sbjct: 137 FLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLW 172
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 290 (107.1 bits), Expect = 9.2e-24, P = 9.2e-24
Identities = 82/316 (25%), Positives = 154/316 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD-G 162
+ H + +VA + G +GS D T ++WD + + GH+N V IA++ G
Sbjct: 88 LRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +GS + W +TGK + GH I +S+ P + S D A
Sbjct: 148 DKIATGSFDKTCKLWSAETGK-CYHTFRGHTAEIVCLSFNPQSTVV-----ATGSMDTTA 201
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + V+ L+GH + + + GD +I TGS D T+ VW+ + G+ + L GH
Sbjct: 202 KLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRII-TGSFDHTVVVWDASTGRKVHTLIGH 260
Query: 281 GHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALERYN-KIKGNAPE---RLVS- 334
++S S + +L TG+ D T + + A L ++ +I + + +L++
Sbjct: 261 CAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIAT 320
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF 394
S D T ++ A +++ T++ GH+ ++ + F+P G + + S DK+ ++W+ TG+
Sbjct: 321 ASADGTARVYN-ATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQC 379
Query: 395 VAVFRGHVGPVYQIRF 410
+ V GH ++ F
Sbjct: 380 LQVLEGHTDEIFSCAF 395
Score = 281 (104.0 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 81/293 (27%), Positives = 136/293 (46%)
Query: 103 TIAGHTEAVLSVAFS-PDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
T+ GH V ++AF+ P G ++A+GS D T +LW T GH ++C++++
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQ 188
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ +GS + WD Q+G+ L+GH I +S++ R ++ S D
Sbjct: 189 STVVATGSMDTTAKLWDIQSGEEVVT-LTGHLAEIISLSFD-----TSGDRIITGSFDHT 242
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGH 280
+WD S + V L GH ++ + D +I TGS D T +W+ T GK + L GH
Sbjct: 243 VVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGH 302
Query: 281 GHWV-NSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY----NKIKGNAP-ERLVS 334
+ +S T + T + D T + Y++ LE + +KI N RL++
Sbjct: 303 DDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLT 362
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
GS D T +W+ + + + GH + F+ G V + S D S ++W
Sbjct: 363 GSSDKTARIWDVQTGQCLQV-LEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 265 (98.3 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 71/259 (27%), Positives = 124/259 (47%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T GHT ++ ++F+P +A+GS DTT +LWD+ + + TGH ++ +++
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSF 227
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG--ISWEPVHLNAPCRRFVSA 216
G +++GS + WD TG+ + L GH I+ SW+ C ++
Sbjct: 228 DTSGDRIITGSFDHTVVVWDASTGRKV-HTLIGHCAEISSALFSWD-------CSLILTG 279
Query: 217 SKDGDARIWDVSLRKCVICLSGHTLAV--TCVKWGGDGVIYTGSQDCTIKVWETTQGKLI 274
S D +WD + KCV L+GH + +C + G +I T S D T +V+ T K I
Sbjct: 280 SMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGK-LIATASADGTARVYNATTRKCI 338
Query: 275 RELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYN--------KIK 325
+L+GH ++ ++ + + L TG+ D T + + LE + K
Sbjct: 339 TKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYK 398
Query: 326 GNAPERLVSGSDDFTMFLW 344
GN +++GS D + +W
Sbjct: 399 GNI---VITGSKDNSCRIW 414
Score = 216 (81.1 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 53/184 (28%), Positives = 89/184 (48%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
+R+++GS D T+ +W+ + ++ T + GH ++ FS D + + S DK+ LW+
Sbjct: 232 DRIITGSFDHTVVVWDASTGRKVHT-LIGHCAEISSALFSWDCSLILTGSMDKTCMLWDA 290
Query: 390 TTGKFVAVFRGHVGPVYQIRFE----LIYCFRYP--SNFYCVVDMSCCMSL--------- 434
T+GK VA GH + F+ LI + Y C L
Sbjct: 291 TSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISK 350
Query: 435 YSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
S++ LL+GS D T ++WD++T + Q L GH DE+F+ ++ G V +G KD
Sbjct: 351 ISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNS 410
Query: 495 LKLW 498
++W
Sbjct: 411 CRIW 414
Score = 174 (66.3 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 52/182 (28%), Positives = 89/182 (48%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFS-PDGQWVASASFDKSIKLWNGTT 391
++GS D T +W+ A ++ T + GH+ +V + F+ P G +A+ SFDK+ KLW+ T
Sbjct: 108 ITGSYDRTCKVWDTASGEELHT-LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAET 166
Query: 392 GKFVAVFRGHVGPVYQIRFE----LIYCFRYPSNFYC--------VVDMSCCMS-LYSWS 438
GK FRGH + + F ++ + VV ++ ++ + S S
Sbjct: 167 GKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLS 226
Query: 439 ADSR--LLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
D+ +++GS D T+ VWD T + L GH E+ + +S D + +G D+
Sbjct: 227 FDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCM 286
Query: 497 LW 498
LW
Sbjct: 287 LW 288
Score = 135 (52.6 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 35/159 (22%), Positives = 74/159 (46%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYC 415
+ H + +V + G + S+D++ K+W+ +G+ + GH VY I F Y
Sbjct: 88 LRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
Query: 416 FRYPSNFY---CVV---DMSCCMSLY----------SWSADSRLLLSGSKDSTLKVWDIR 459
+ + + C + + C + S++ S ++ +GS D+T K+WDI+
Sbjct: 148 DKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQ 207
Query: 460 TQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+ + L GH E+ ++ + G+++ +G D + +W
Sbjct: 208 SGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVW 246
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 277 (102.6 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 88/298 (29%), Positives = 145/298 (48%)
Query: 214 VSASKDGDARIWDVSLRKC--VICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQ 270
+S+ D IW V C V+ +SGH+ AV + DG I+T S D T+ W+
Sbjct: 71 LSSGFDRQIYIWQV-YEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIAT 129
Query: 271 GKLIRELKGHGHWVNSLALST--EYALRTGAFDHTGKQYSSPEEMKKAALERYNKIK--- 325
G+ R KGHG++VNS+ S + L +G+ D T K + + ++ LE ++
Sbjct: 130 GQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQVTAVC 189
Query: 326 -GNAPERLVSGSDDFTMFLWEPAVSKQPKTR-MTGHQQLVNHVYFSPDGQWVASASFDKS 383
G+ E+++SG D + +W+ + KQ + GH + + SP+G ++ + + D +
Sbjct: 190 FGDTGEQVISGGIDNEVKIWD--IRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNT 247
Query: 384 IKLWNG---TTG-KFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSA 439
+++W+ G + V VF+GH Q FE N + C +WS
Sbjct: 248 LRVWDVRPYAPGERCVKVFQGH-----QHNFE--------KNL-----LRC-----AWSP 284
Query: 440 DSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKL 497
S + SGS D + +WD+ T+++ LPGH V AVD+SP + SG D+ L L
Sbjct: 285 GSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYL 342
Score = 232 (86.7 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
Identities = 73/299 (24%), Positives = 128/299 (42%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTP-MFKCTGHKNWVLCIAWSADG 162
+ GH + + F P+G L S D + +W + + +GH V+ ++ DG
Sbjct: 51 LEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDG 110
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+ + S L WD TG+ GH ++ + C S S D
Sbjct: 111 SHIFTCSTDKTLAFWDIATGQRQRR-FKGHGNFVNSVQGSRRGQQLLC----SGSDDRTI 165
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHG 281
+IWD + L VT V +G G + +G D +K+W+ + ++ L+GH
Sbjct: 166 KIWDARKKHAAHTLES-PFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHS 224
Query: 282 HWVNSLALSTEYA-LRTGAFDHT-----GKQYSSPEEMKKAALERYNKIKGN------AP 329
+ ++LS E + T A D+T + Y+ E K + + N +P
Sbjct: 225 DTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSP 284
Query: 330 --ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
+++ SGS D +++W+ +++ ++ GH VN V FSP + S S DK++ L
Sbjct: 285 GSDKITSGSADRHVYIWD-VNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYL 342
Score = 181 (68.8 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 47/184 (25%), Positives = 84/184 (45%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
E L+S D +++W+ + M+GH V +F+PDG + + S DK++ W+
Sbjct: 68 ELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDI 127
Query: 390 TTGKFVAVFRGHVGPVYQI----RFELIYCFRYPSNFYCVVDMS---CCMSLYS------ 436
TG+ F+GH V + R + + C + D +L S
Sbjct: 128 ATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQVTA 187
Query: 437 --WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
+ ++SG D+ +K+WDIR Q + L GH+D + + SP+G+ + + D
Sbjct: 188 VCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNT 247
Query: 495 LKLW 498
L++W
Sbjct: 248 LRVW 251
Score = 180 (68.4 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 64/258 (24%), Positives = 119/258 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH+ AV+ F+PDG + + S D T+ WD+ T + GH N+V + S G+
Sbjct: 94 MSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQ 153
Query: 164 HLV-SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
L+ SGS ++ WD + K + + L + +T + + + +S D +
Sbjct: 154 QLLCSGSDDRTIKIWDARK-KHAAHTLESPFQ-VTAVCFGDTG-----EQVISGGIDNEV 206
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWET---TQG-KLIREL 277
+IWD+ + + L GH+ +T + +G I T + D T++VW+ G + ++
Sbjct: 207 KIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVF 266
Query: 278 KGHGHWVNSLALSTEYA-----LRTGAFD-HTGK-QYSSPEEMKKAALER--YNKIKGNA 328
+GH H L ++ + +G+ D H ++ + K N + +
Sbjct: 267 QGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSP 326
Query: 329 PERLV-SGSDDFTMFLWE 345
E L+ SGS D T++L E
Sbjct: 327 KEPLILSGSSDKTLYLGE 344
Score = 140 (54.3 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 61/288 (21%), Positives = 116/288 (40%)
Query: 138 NTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWIT 197
N Q P+ + GH+ + + +G+ L+S ++ W + +SGH +
Sbjct: 43 NLQAPIMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGH----S 98
Query: 198 GISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIY 255
G E H + S D WD++ + GH V V+ G ++
Sbjct: 99 GAVME-AHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLC 157
Query: 256 TGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMK 314
+GS D TIK+W+ + L+ V ++ T + +G D+ K + ++
Sbjct: 158 SGSDDRTIKIWDARKKHAAHTLESPFQ-VTAVCFGDTGEQVISGGIDNEVKIWDIRKQAV 216
Query: 315 KAALERYNK-IKGNA--PER--LVSGSDDFTMFLWE--PAVSKQPKTRM-TGHQQLVN-- 364
L ++ I G + PE +++ + D T+ +W+ P + ++ GHQ
Sbjct: 217 LHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKN 276
Query: 365 --HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+SP + S S D+ + +W+ T + + GH G V + F
Sbjct: 277 LLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDF 324
Score = 43 (20.2 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 437 WSADSRLLLSGSKDSTLKVWDI 458
+S L+LSGS D TL + +I
Sbjct: 324 FSPKEPLILSGSSDKTLYLGEI 345
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 277 (102.6 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 89/322 (27%), Positives = 151/322 (46%)
Query: 89 QAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC-T 147
QAV R +N + GH+ V +V F P + +ASGS D ++ LW+ Q + +
Sbjct: 47 QAVPRTSGLNAPIMELTGHSGEVFAVRFDPTAQHIASGSMDRSILLWNTYGQCENYGILS 106
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLN 207
GHK +L + WS D K + S S L WD ++G+ + GH++ I + +
Sbjct: 107 GHKGAILDLQWSRDSKTIFSASADMTLASWDIESGQRIRRYI-GHEEVINSVE---ISKR 162
Query: 208 APCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVW 266
VSAS DG IWD ++ + L L +T V G +++G D I VW
Sbjct: 163 GQ-EMLVSASDDGTMGIWDPRQKEAIDYLETE-LPITAVAQSEAGNEVFSGGIDNAIHVW 220
Query: 267 ETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYS-SPEEMKKAALERY--- 321
+ + ++ + GH + SL +S + L + +FD T + + P + Y
Sbjct: 221 DIRKKAIVYSMAGHMDTITSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGA 280
Query: 322 ------NKIKGN---APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
N I+ + A +++ +GS D ++ +W+ K ++ GH+ VN V F+P+
Sbjct: 281 PVGLEKNLIRASWNPAGDKIAAGSGDRSVVVWDFKTGKI-LYKLPGHKGTVNDVRFTPNN 339
Query: 373 Q-WVASASFDKSIKLWNGTTGK 393
+ + SAS D+++ L G GK
Sbjct: 340 EPIIVSASSDRNLML--GELGK 359
Score = 170 (64.9 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 67/304 (22%), Positives = 126/304 (41%)
Query: 124 ASGSGDTTVRLWDLNT--QTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT 181
+SG T V+ + P+ + TGH V + + +H+ SGS + W+
Sbjct: 38 SSGQDGTLVQAVPRTSGLNAPIMELTGHSGEVFAVRFDPTAQHIASGSMDRSILLWNTYG 97
Query: 182 GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTL 241
+ LSGHK I + W + + SAS D WD+ + + GH
Sbjct: 98 QCENYGILSGHKGAILDLQW-----SRDSKTIFSASADMTLASWDIESGQRIRRYIGHEE 152
Query: 242 AVTCVKWG--GDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTG 298
+ V+ G ++ + S D T+ +W+ Q + I L+ + ++A S + +G
Sbjct: 153 VINSVEISKRGQEMLVSASDDGTMGIWDPRQKEAIDYLETELP-ITAVAQSEAGNEVFSG 211
Query: 299 AFDHTGKQYSSPEEM----KKAALERYNKIKGNAPER-LVSGSDDFTMFLWE--PAVSKQ 351
D+ + ++ ++ ++ + + L+S S D T+ W+ P
Sbjct: 212 GIDNAIHVWDIRKKAIVYSMAGHMDTITSLEVSPDSQTLLSNSFDSTVRTWDIRPFAPTN 271
Query: 352 PKTRM-----TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVY 406
R G ++ + ++P G +A+ S D+S+ +W+ TGK + GH G V
Sbjct: 272 RHIRTYDGAPVGLEKNLIRASWNPAGDKIAAGSGDRSVVVWDFKTGKILYKLPGHKGTVN 331
Query: 407 QIRF 410
+RF
Sbjct: 332 DVRF 335
Score = 141 (54.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 52/190 (27%), Positives = 86/190 (45%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQ-WVASASFDKSIKLWNG- 389
+ S S D T+ W+ S Q R GH++++N V S GQ + SAS D ++ +W+
Sbjct: 124 IFSASADMTLASWD-IESGQRIRRYIGHEEVINSVEISKRGQEMLVSASDDGTMGIWDPR 182
Query: 390 ---------TTGKFVAVFRGHVG-PVYQIRFEL---IYCFRYPSNFYCVVDMSCCMSLYS 436
T AV + G V+ + ++ R + Y + ++
Sbjct: 183 QKEAIDYLETELPITAVAQSEAGNEVFSGGIDNAIHVWDIRKKAIVYSMAGHMDTITSLE 242
Query: 437 WSADSRLLLSGSKDSTLKVWDIR-----TQKLK--QDLP-GHADEVFAVDWSPDGEKVAS 488
S DS+ LLS S DST++ WDIR + ++ P G + W+P G+K+A+
Sbjct: 243 VSPDSQTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAPVGLEKNLIRASWNPAGDKIAA 302
Query: 489 GGKDRVLKLW 498
G DR + +W
Sbjct: 303 GSGDRSVVVW 312
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 38/184 (20%), Positives = 82/184 (44%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
+ + SGS D ++ LW + ++GH+ + + +S D + + SAS D ++ W+
Sbjct: 79 QHIASGSMDRSILLWNTYGQCENYGILSGHKGAILDLQWSRDSKTIFSASADMTLASWDI 138
Query: 390 TTGKFVAVFRGHVGPVYQIRF-----ELIYCFRY--------PSNFYCV--VDMSCCMSL 434
+G+ + + GH + + E++ P + ++ ++
Sbjct: 139 ESGQRIRRYIGHEEVINSVEISKRGQEMLVSASDDGTMGIWDPRQKEAIDYLETELPITA 198
Query: 435 YSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
+ S + SG D+ + VWDIR + + + GH D + +++ SPD + + S D
Sbjct: 199 VAQSEAGNEVFSGGIDNAIHVWDIRKKAIVYSMAGHMDTITSLEVSPDSQTLLSNSFDST 258
Query: 495 LKLW 498
++ W
Sbjct: 259 VRTW 262
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 288 (106.4 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 83/293 (28%), Positives = 136/293 (46%)
Query: 103 TIAGHTEAVLSVAFS-PDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
T+ GH V ++AF+ P G ++A+GS D T +LW + T GH ++C++++
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQ 188
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ +GS + WD Q G+ L GH I +S+ N R ++ S D
Sbjct: 189 STLVATGSMDTTAKLWDIQNGEEVYT-LRGHSAEIISLSF-----NTSGDRIITGSFDHT 242
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGH 280
+WD + V L GH ++ + D +I TGS D T K+W+ T GK + L GH
Sbjct: 243 VVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGH 302
Query: 281 GHWV-NSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY----NKIKGNAP-ERLVS 334
+ +S T + T + D T + +S+ A LE + +KI N L++
Sbjct: 303 DDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLT 362
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
GS D T +W+ A + Q + GH + F+ G V + S D + ++W
Sbjct: 363 GSSDKTARIWD-AQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 288 (106.4 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 82/316 (25%), Positives = 153/316 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD-G 162
+ H + +VA + G +GS D T +LWD + + GH+N V IA++ G
Sbjct: 88 LKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYG 147
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +GS + W +TGK + GH I +S+ P + S D A
Sbjct: 148 DKIATGSFDKTCKLWSVETGK-CYHTFRGHTAEIVCLSFNP-----QSTLVATGSMDTTA 201
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + V L GH+ + + + GD +I TGS D T+ VW+ G+ + L GH
Sbjct: 202 KLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRII-TGSFDHTVVVWDADTGRKVNILIGH 260
Query: 281 GHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALERYN-KIKGNAPE---RLVS- 334
++S + + + +L TG+ D T K + + A L ++ +I + + +L++
Sbjct: 261 CAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIAT 320
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF 394
S D T ++ A +++ ++ GH+ ++ + F+P G + + S DK+ ++W+ TG+
Sbjct: 321 ASADGTARIFS-AATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQC 379
Query: 395 VAVFRGHVGPVYQIRF 410
+ V GH ++ F
Sbjct: 380 LQVLEGHTDEIFSCAF 395
Score = 273 (101.2 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 70/257 (27%), Positives = 125/257 (48%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T GHT ++ ++F+P +A+GS DTT +LWD+ ++ GH ++ +++
Sbjct: 168 KCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSF 227
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
+ G +++GS + WD TG+ N L GH I+ S+ N C ++ S
Sbjct: 228 NTSGDRIITGSFDHTVVVWDADTGRKV-NILIGHCAEISSASF-----NWDCSLILTGSM 281
Query: 219 DGDARIWDVSLRKCVICLSGHTLAV--TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRE 276
D ++WD + KCV L+GH + +C + G +I T S D T +++ K I +
Sbjct: 282 DKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGK-LIATASADGTARIFSAATRKCIAK 340
Query: 277 LKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYN--------KIKGN 327
L+GH ++ ++ + + L TG+ D T + + + LE + KGN
Sbjct: 341 LEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGN 400
Query: 328 APERLVSGSDDFTMFLW 344
+++GS D T +W
Sbjct: 401 I---VITGSKDNTCRIW 414
Score = 205 (77.2 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 51/184 (27%), Positives = 86/184 (46%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
+R+++GS D T+ +W+ ++ + GH ++ F+ D + + S DK+ KLW+
Sbjct: 232 DRIITGSFDHTVVVWDADTGRKVNI-LIGHCAEISSASFNWDCSLILTGSMDKTCKLWDA 290
Query: 390 TTGKFVAVFRGHVGPVYQIRFE----LIYCFRYP--SNFYCVVDMSCCMSL--------- 434
T GK VA GH + F+ LI + + C L
Sbjct: 291 TNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISK 350
Query: 435 YSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
S++ LL+GS D T ++WD +T + Q L GH DE+F+ ++ G V +G KD
Sbjct: 351 ISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNT 410
Query: 495 LKLW 498
++W
Sbjct: 411 CRIW 414
Score = 187 (70.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 52/182 (28%), Positives = 87/182 (47%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFS-PDGQWVASASFDKSIKLWNGTT 391
++GS D T LW+ A ++ T + GH+ +V + F+ P G +A+ SFDK+ KLW+ T
Sbjct: 108 ITGSYDRTCKLWDTASGEELNT-LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVET 166
Query: 392 GKFVAVFRGHVGPVYQIRFE----LI-----------YCFRYPSNFYCVVDMSCCMSLYS 436
GK FRGH + + F L+ + + Y + S + S
Sbjct: 167 GKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLS 226
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
++ +++GS D T+ VWD T + L GH E+ + ++ D + +G D+ K
Sbjct: 227 FNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCK 286
Query: 497 LW 498
LW
Sbjct: 287 LW 288
Score = 148 (57.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 38/159 (23%), Positives = 75/159 (47%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYC 415
+ H + +V + G + S+D++ KLW+ +G+ + GH VY I F Y
Sbjct: 88 LKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYG 147
Query: 416 FRYPSNFY---CV---VDMSCCMSLY----------SWSADSRLLLSGSKDSTLKVWDIR 459
+ + + C V+ C + S++ S L+ +GS D+T K+WDI+
Sbjct: 148 DKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQ 207
Query: 460 TQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+ L GH+ E+ ++ ++ G+++ +G D + +W
Sbjct: 208 NGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVW 246
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 288 (106.4 bits), Expect = 5.8e-23, Sum P(2) = 5.8e-23
Identities = 80/248 (32%), Positives = 121/248 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I+GH V +A P + +GS D T+++WDL + TGH + V + SA
Sbjct: 202 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSP 261
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S + +++CWD + K + GH + G+ P ++ V+ S+D AR
Sbjct: 262 YLFSCGEDKQVKCWDLEYNKVIRH-YHGHLSAVYGLDLHPT-IDV----LVTCSRDSTAR 315
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
IWDV + V LSGHT AV VK + + TGS D TI++W+ GK L H
Sbjct: 316 IWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKK 375
Query: 283 WVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----NAPERLVSGSD 337
V ++ L Y +G+ D+ KQ+ P+ L +N I N+ LVSG+D
Sbjct: 376 SVRAVILHPRHYTFASGSPDNI-KQWKFPDGNFIQNLSGHNAIINTLTVNSDGVLVSGAD 434
Query: 338 DFTMFLWE 345
+ TM LW+
Sbjct: 435 NGTMHLWD 442
Score = 192 (72.6 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 64/220 (29%), Positives = 101/220 (45%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ I+ EP + + FV+ S D +IWD++ K + L+GH V V
Sbjct: 202 ISGHLGWVRCIAVEPGN-----QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 256
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ +D +K W+ K+IR GH V L L T L T + D T +
Sbjct: 257 SARSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 316
Query: 307 YSSPEEMKKAALERYNK----IKGNAPE-RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ + L + +K A E ++V+GS D T+ LW+ V+ + + +T H++
Sbjct: 317 WDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWD-LVAGKTRVTLTNHKK 375
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
V V P AS S D +IK W G F+ GH
Sbjct: 376 SVRAVILHPRHYTFASGSPD-NIKQWKFPDGNFIQNLSGH 414
Score = 185 (70.2 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 55/209 (26%), Positives = 91/209 (43%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH AV + P L + S D+T R+WD+ T+ + +GH N V + A +
Sbjct: 288 GHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQV 347
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
V+GS ++ WD GK L+ HKK + + P H F S S D + + W
Sbjct: 348 VTGSHDTTIRLWDLVAGKTRVT-LTNHKKSVRAVILHPRHYT-----FASGSPD-NIKQW 400
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVN 285
+ LSGH + + DGV+ +G+ + T+ +W+ G + + H V
Sbjct: 401 KFPDGNFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQRV--HAA-VQ 457
Query: 286 SLALSTEYALRTGAFDHTGKQYSSPEEMK 314
+L +E + FD + + + E K
Sbjct: 458 PGSLDSESGIFACVFDQSESRLLTAEADK 486
Score = 169 (64.5 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 56/202 (27%), Positives = 89/202 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH V V S L S D V+ WDL + GH + V +
Sbjct: 243 SLTGHISTVRGVIVSARSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTI 302
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
LV+ S+ + WD +T K S + LSGH + + + P + V+ S D
Sbjct: 303 DVLVTCSRDSTARIWDVRT-KASVHTLSGHTNAVATVKCQAAE---P--QVVTGSHDTTI 356
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHG 281
R+WD+ K + L+ H +V V + +GS D IK W+ G I+ L GH
Sbjct: 357 RLWDLVAGKTRVTLTNHKKSVRAVILHPRHYTFASGSPD-NIKQWKFPDGNFIQNLSGHN 415
Query: 282 HWVNSLALSTEYALRTGAFDHT 303
+N+L ++++ L +GA + T
Sbjct: 416 AIINTLTVNSDGVLVSGADNGT 437
Score = 152 (58.6 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 48/181 (26%), Positives = 79/181 (43%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
V+GS D T+ +W+ A K K +TGH V V S ++ S DK +K W+
Sbjct: 222 VTGSADRTIKIWDLASGKL-KLSLTGHISTVRGVIVSARSPYLFSCGEDKQVKCWDLEYN 280
Query: 393 KFVAVFRGHVGPVYQIRFE-----LIYC----------FRYPSNFYCVVDMSCCMSLYSW 437
K + + GH+ VY + L+ C R ++ + + + ++
Sbjct: 281 KVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVKC 340
Query: 438 SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKL 497
A +++GS D+T+++WD+ K + L H V AV P ASG D + K
Sbjct: 341 QAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVILHPRHYTFASGSPDNI-KQ 399
Query: 498 W 498
W
Sbjct: 400 W 400
Score = 147 (56.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 52/216 (24%), Positives = 90/216 (41%)
Query: 300 FDHTG-KQYSSPEEMKKAALERY-NKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT 357
+ H G + S P M A +E NK P++ + W P K + ++
Sbjct: 150 YRHAGISERSQPPGMSMAMMEPGGNKNSALVPKK----APTMPKPQWHPPW-KLYRV-IS 203
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV----GPVYQIRFELI 413
GH V + P QW + S D++IK+W+ +GK GH+ G + R +
Sbjct: 204 GHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSPYL 263
Query: 414 YCFRYPSNFYCV-VDMSCCMSLYS------WSADSR----LLLSGSKDSTLKVWDIRTQK 462
+ C ++ + + Y + D +L++ S+DST ++WD+RT+
Sbjct: 264 FSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKA 323
Query: 463 LKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L GH + V V +V +G D ++LW
Sbjct: 324 SVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLW 359
Score = 122 (48.0 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 39/124 (31%), Positives = 55/124 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GHT AV +V Q+ +GS DTT+RLWDL T HK V +
Sbjct: 327 TLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVILHPRH 386
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
SGS ++ W G N LSGH I ++ +N+ VS + +G
Sbjct: 387 YTFASGSP-DNIKQWKFPDGNFIQN-LSGHNAIINTLT-----VNSD-GVLVSGADNGTM 438
Query: 223 RIWD 226
+WD
Sbjct: 439 HLWD 442
Score = 41 (19.5 bits), Expect = 5.8e-23, Sum P(2) = 5.8e-23
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 42 VNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVY 86
V+ L+ K + +++D+ VPL E HKV + L Y
Sbjct: 10 VHTLVFRSLKRTHDMFVADNAKPVPLDD--ESHKVKMAVKLRTEY 52
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 283 (104.7 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 84/307 (27%), Positives = 139/307 (45%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH +AV V FS + +QLASGS D+ + +W + Q+ ++ TGHK+ V C+ +S G L
Sbjct: 17 GHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
SGS+ ++ W P K H + VH + + FV+AS D ++W
Sbjct: 77 ASGSRDKTVRIWVPNV-KGESTVFRAHTATVRS-----VHFCSDGQSFVTASDDKTVKVW 130
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
+K + LS H V C K+ DG +I + S D T+K+W+ + + + HG +V
Sbjct: 131 ATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFV 190
Query: 285 NSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNK-IKGNA--PER--LVSGSDD 338
+ + D+T K + + ++ + G + P L++ S D
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSD 250
Query: 339 FTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVF 398
T+ + + + T + GHQ V FS G++ AS D+ + +W F V
Sbjct: 251 STLKILDLMEGRLLYT-LHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSN---FDIVD 306
Query: 399 RGHVGPV 405
G V V
Sbjct: 307 HGEVTKV 313
Score = 233 (87.1 bits), Expect = 7.6e-17, P = 7.6e-17
Identities = 58/205 (28%), Positives = 98/205 (47%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT V SV F DG+ + S D TV++W + Q +F + H NWV C +S
Sbjct: 96 STVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSP 155
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S ++ WD ++ + + H ++T + + P + C +A D
Sbjct: 156 DGRLIVSASDDKTVKLWD-KSSRECVHSYCEHGGFVTYVDFHP---SGTC--IAAAGMDN 209
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
++WDV + + H+ AV + + G + T S D T+K+ + +G+L+ L G
Sbjct: 210 TVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHG 269
Query: 280 HGHWVNSLALSTEYALRTGAFDHTG 304
H ++A S RTG + +G
Sbjct: 270 HQGPATTVAFS-----RTGEYFASG 289
Score = 189 (71.6 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 56/185 (30%), Positives = 84/185 (45%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKT-RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
++L SGS D + +W + Q + R TGH+ V V FSP G +AS S DK++++W
Sbjct: 32 KQLASGSMDSCLMVWH--MKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWV 89
Query: 389 GTTGKFVAVFRGHVGPVYQIRF-ELIYCFRYPSN-----FYCVVDMSCCMSL---YSW-- 437
VFR H V + F F S+ + SL +W
Sbjct: 90 PNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVR 149
Query: 438 ----SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 493
S D RL++S S D T+K+WD +++ H V VD+ P G +A+ G D
Sbjct: 150 CAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDN 209
Query: 494 VLKLW 498
+K+W
Sbjct: 210 TVKVW 214
Score = 166 (63.5 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 56/185 (30%), Positives = 85/185 (45%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKT-RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
+ V+ SDD T+ +W A +Q ++ H V FSPDG+ + SAS DK++KLW+
Sbjct: 116 QSFVTASDDKTVKVW--ATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Query: 389 GTTGKFVAVFRGHVGPVYQIRFELI-YCFRYPS--NFYCVVDM------------SCCMS 433
++ + V + H G V + F C N V D+ S ++
Sbjct: 174 KSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVN 233
Query: 434 LYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 493
S+ L++ S DSTLK+ D+ +L L GH V +S GE ASGG D
Sbjct: 234 GLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDE 293
Query: 494 VLKLW 498
+ +W
Sbjct: 294 QVMVW 298
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+S +++ L SGS DS L VW ++ Q GH D V V++SP G +ASG +D+ ++
Sbjct: 27 FSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVR 86
Query: 497 LWM 499
+W+
Sbjct: 87 IWV 89
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 282 (104.3 bits), Expect = 7.5e-23, P = 7.5e-23
Identities = 80/292 (27%), Positives = 135/292 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH +AV V FS + + LASGS D+T+ +W + Q+ ++ TGHK+ V C+ +S G L
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
SGS+ ++ W P K H + VH + + V+AS D ++W
Sbjct: 77 ASGSRDKTVRIWVPNV-KGESTVFRAHTATVRS-----VHFCSDGQSLVTASDDKTVKVW 130
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
++ + L+ H V C K+ DG +I + S D T+K+W+ T + I HG +V
Sbjct: 131 STHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFV 190
Query: 285 NSLALSTE-YALRTGAFDHTGKQYSSPE-------EMKKAALERYN-KIKGNAPERLVSG 335
+ + D+T K + + ++ AA+ + GN L++
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNY---LITA 247
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GHQ V FS G++ AS D+ + +W
Sbjct: 248 SSDSTLKILDLMEGRLLYT-LHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 251 (93.4 bits), Expect = 5.7e-19, P = 5.7e-19
Identities = 69/241 (28%), Positives = 112/241 (46%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT V SV F DG+ L + S D TV++W + Q +F T H NWV C +S
Sbjct: 96 STVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSP 155
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S ++ WD +T + + H ++T + + P + C +A D
Sbjct: 156 DGRLIVSASDDKTVKLWD-KTSRECIHSYCEHGGFVTYVDFHP---SGTC--IAAAGMDN 209
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
++WD + + H+ AV + + G + T S D T+K+ + +G+L+ L G
Sbjct: 210 TVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHG 269
Query: 280 HGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMK--KAALE--RYNKIKGNAPERLVSG 335
H ++A S RTG + +G S E++ K+ + Y +K P L S
Sbjct: 270 HQGPATTVAFS-----RTGEYFASG---GSDEQVMVWKSNFDIVDYGDMKARRPPPLTSS 321
Query: 336 S 336
S
Sbjct: 322 S 322
Score = 195 (73.7 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 56/185 (30%), Positives = 84/185 (45%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKT-RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
+ L SGS D T+ +W + Q + R TGH+ V V FSP G +AS S DK++++W
Sbjct: 32 KHLASGSMDSTLMIWH--MKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWV 89
Query: 389 GTTGKFVAVFRGHVGPVYQIRF-----ELIYCFRYPS-NFYCVVDMSCCMSL---YSW-- 437
VFR H V + F L+ + + SL +W
Sbjct: 90 PNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVR 149
Query: 438 ----SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 493
S D RL++S S D T+K+WD +++ H V VD+ P G +A+ G D
Sbjct: 150 CAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDN 209
Query: 494 VLKLW 498
+K+W
Sbjct: 210 TVKVW 214
Score = 174 (66.3 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 56/184 (30%), Positives = 84/184 (45%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
+ LV+ SDD T+ +W ++ +T H V FSPDG+ + SAS DK++KLW+
Sbjct: 116 QSLVTASDDKTVKVWSTH-RQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK 174
Query: 390 TTGKFVAVFRGHVGPVYQIRFELI-YCFRYPS--NFYCVVDM------------SCCMSL 434
T+ + + + H G V + F C N V D S ++
Sbjct: 175 TSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNA 234
Query: 435 YSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
S+ L++ S DSTLK+ D+ +L L GH V +S GE ASGG D
Sbjct: 235 LSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQ 294
Query: 495 LKLW 498
+ +W
Sbjct: 295 VMVW 298
Score = 135 (52.6 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+S +++ L SGS DSTL +W ++ Q GH D V V++SP G +ASG +D+ ++
Sbjct: 27 FSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVR 86
Query: 497 LWM 499
+W+
Sbjct: 87 IWV 89
Score = 119 (46.9 bits), Expect = 0.00045, P = 0.00045
Identities = 40/156 (25%), Positives = 67/156 (42%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----L 412
GH+ V V FS + + +AS S D ++ +W+ F GH V + F L
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 413 IYCFRYPSNFYCVVDMSCCMSLYS----------WSADSRLLLSGSKDSTLKVWDIRTQK 462
R + V ++ +++ + +D + L++ S D T+KVW Q+
Sbjct: 77 ASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQR 136
Query: 463 LKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L H + V +SPDG + S D+ +KLW
Sbjct: 137 FLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLW 172
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 274 (101.5 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 93/326 (28%), Positives = 145/326 (44%)
Query: 79 EKVLSIVYQPQAVFRIRPVN-----RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVR 133
+K S++ +P A R +P + I+GH V S+A P+ ASG+GD T++
Sbjct: 110 DKPTSLIQRPSAT-RQQPPEWHAPWKLMRVISGHLGWVRSLAVEPNNEWFASGAGDRTIK 168
Query: 134 LWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHK 193
+W+L T TGH + V +A S +L S + ++CWD +T K + GH
Sbjct: 169 IWNLATGALRLTLTGHISTVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRH-YHGHL 227
Query: 194 KWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG-GDG 252
+ ++ P L+ V+ +DG AR+WD+ R + LSGHT V V+ D
Sbjct: 228 SGVYTLALHP-RLDL----LVTGGRDGVARVWDMRTRSNIHVLSGHTGTVADVQCQEADP 282
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
+ TGS D T+++W+ GK + L H + SLA A + KQ+ P
Sbjct: 283 QVITGSLDATVRLWDLAAGKTMGVLTHHKKGIRSLATHPREFTFASASTGSIKQWKCPGG 342
Query: 313 MKKAALERYNKIKG----NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQ--QL---- 362
E +N I N L SG D+ +M W+ + +T T Q L
Sbjct: 343 EFMQNFEGHNAIINTLSVNEDNVLFSGGDNGSMSFWDWKTGYRYQTIDTTAQPGSLEAEA 402
Query: 363 -VNHVYFSPDGQWVASASFDKSIKLW 387
+ F G + + DK+IK+W
Sbjct: 403 GIMTSTFDRTGLRLITGEADKTIKVW 428
Score = 192 (72.6 bits), Expect = 7.1e-13, Sum P(2) = 7.1e-13
Identities = 64/265 (24%), Positives = 119/265 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH V +A SP L S D V+ WDL T + GH + V +A
Sbjct: 180 TLTGHISTVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRL 239
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
LV+G + G + WD +T + + + LSGH + + + P + ++ S D
Sbjct: 240 DLLVTGGRDGVARVWDMRT-RSNIHVLSGHTGTVADVQCQEAD---P--QVITGSLDATV 293
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
R+WD++ K + L+ H + + + + +IK W+ G+ ++ +GH
Sbjct: 294 RLWDLAAGKTMGVLTHHKKGIRSLATHPREFTFASASTGSIKQWKCPGGEFMQNFEGHNA 353
Query: 283 WVNSLALSTEYALRTGA-------FD-HTGKQYSSPEEMKK-AALERYNKIKGNAPER-- 331
+N+L+++ + L +G +D TG +Y + + + +LE I + +R
Sbjct: 354 IINTLSVNEDNVLFSGGDNGSMSFWDWKTGYRYQTIDTTAQPGSLEAEAGIMTSTFDRTG 413
Query: 332 --LVSGSDDFTMFLWEPAVSKQPKT 354
L++G D T+ +W+ P+T
Sbjct: 414 LRLITGEADKTIKVWKQDDQATPET 438
Score = 161 (61.7 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 57/220 (25%), Positives = 95/220 (43%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ ++ EP + F S + D +IW+++ + L+GH V +
Sbjct: 139 ISGHLGWVRSLAVEPNN-----EWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAV 193
Query: 249 GG-DGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQ 306
+++ +D +K W+ K+IR GH V +LAL L TG D +
Sbjct: 194 SPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARV 253
Query: 307 YSSPEEMKKAALERYNKIKGN-----APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ L + + A ++++GS D T+ LW+ A K +T H++
Sbjct: 254 WDMRTRSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWDLAAGKTMGV-LTHHKK 312
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
+ + P ASAS SIK W G+F+ F GH
Sbjct: 313 GIRSLATHPREFTFASASTG-SIKQWKCPGGEFMQNFEGH 351
Score = 151 (58.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 46/162 (28%), Positives = 70/162 (43%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYC 415
++GH V + P+ +W AS + D++IK+WN TG GH+ V +
Sbjct: 139 ISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSP--- 195
Query: 416 FRYPSNFYCVVD-MSCCMSL----------------YSWSADSRL--LLSGSKDSTLKVW 456
R+P F C D M C L Y+ + RL L++G +D +VW
Sbjct: 196 -RHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVW 254
Query: 457 DIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
D+RT+ L GH V V +V +G D ++LW
Sbjct: 255 DMRTRSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLW 296
Score = 126 (49.4 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 46/185 (24%), Positives = 81/185 (43%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
E SG+ D T+ +W A T +TGH V + SP ++ S DK +K W+
Sbjct: 156 EWFASGAGDRTIKIWNLATGALRLT-LTGHISTVRGLAVSPRHPYLFSCGEDKMVKCWDL 214
Query: 390 TTGKFVAVFRGHVGPVYQI----RFEL-----------IYCFRYPSNFYCVVDMSCCMS- 433
T K + + GH+ VY + R +L ++ R SN + + + ++
Sbjct: 215 ETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVAD 274
Query: 434 LYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 493
+ AD +++ +GS D+T+++WD+ K L H + ++ P AS
Sbjct: 275 VQCQEADPQVI-TGSLDATVRLWDLAAGKTMGVLTHHKKGIRSLATHPREFTFASASTGS 333
Query: 494 VLKLW 498
+ K W
Sbjct: 334 I-KQW 337
Score = 50 (22.7 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 444 LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSP 481
L++G D T+KVW KQD E V W+P
Sbjct: 416 LITGEADKTIKVW-------KQDDQA-TPETHPVTWAP 445
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 267 (99.0 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 90/320 (28%), Positives = 154/320 (48%)
Query: 88 PQAVFRIRPVNRCSAT------IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
P A+ + P RCS+ ++GH V F P+G LAS D + LW++
Sbjct: 42 PGALLQAGPP-RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDC 100
Query: 142 PMFKCT-GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGIS 200
+ GH V+ + ++ DG L S S + WD +TG+ L GH ++ S
Sbjct: 101 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--S 157
Query: 201 WEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGS 258
P P + + S DG ++WD+ +K I +T V V + D +I +G
Sbjct: 158 CYPAR-RGP-QLVCTGSDDGTVKLWDIR-KKAAIQTFQNTYQVLAVTFNDTSDQII-SGG 213
Query: 259 QDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYS----SPEE- 312
D IKVW+ Q KL ++GH V L+LS+E + L + A D+T + + +P+E
Sbjct: 214 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKER 273
Query: 313 -MK--KAALERYNK--IKGN-APE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
+K + + + K ++ + +P+ ++ +GS D +++W+ S++ ++ GH +N
Sbjct: 274 CVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD-TTSRRILYKLPGHAGSIN 332
Query: 365 HVYFSPDGQWVASASFDKSI 384
V F PD + SAS DK +
Sbjct: 333 EVAFHPDEPIILSASSDKRL 352
Score = 242 (90.2 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 87/328 (26%), Positives = 152/328 (46%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKC--VICLSGHTLAVTCV 246
LSGH+ + + P N SA D +W+V C L GH+ AV +
Sbjct: 63 LSGHEGEVYCCKFHP---NGST--LASAGFDRLILLWNV-YGDCDNYATLKGHSGAVMEL 116
Query: 247 KWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSL--ALSTEYALRTGAFDHT 303
+ DG ++++ S D T+ VW++ G+ ++ LKGH +VNS A + TG+ D T
Sbjct: 117 HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 176
Query: 304 GKQYSSPEEMKKAALERY-NKIK------GNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
K + + KKAA++ + N + + ++++SG D + +W+ +K T M
Sbjct: 177 VKLW---DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT-M 232
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWN----GTTGKFVAVFRGHVGPVYQIRFEL 412
GH V + S +G ++ S + D ++++W+ + V +F+G+V + L
Sbjct: 233 RGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV---HNFEKNL 289
Query: 413 IYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHAD 472
+ C SWS D + +GS D + VWD ++++ LPGHA
Sbjct: 290 LRC--------------------SWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAG 329
Query: 473 EVFAVDWSPDGEKVASGGKDRVLKLWMG 500
+ V + PD + S D+ +L+MG
Sbjct: 330 SINEVAFHPDEPIILSASSDK--RLYMG 355
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 267 (99.0 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 90/320 (28%), Positives = 154/320 (48%)
Query: 88 PQAVFRIRPVNRCSAT------IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
P A+ + P RCS+ ++GH V F P+G LAS D + LW++
Sbjct: 41 PGALLQAGPP-RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDC 99
Query: 142 PMFKCT-GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGIS 200
+ GH V+ + ++ DG L S S + WD +TG+ L GH ++ S
Sbjct: 100 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--S 156
Query: 201 WEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGS 258
P P + + S DG ++WD+ +K I +T V V + D +I +G
Sbjct: 157 CYPAR-RGP-QLVCTGSDDGTVKLWDIR-KKAAIQTFQNTYQVLAVTFNDTSDQII-SGG 212
Query: 259 QDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYS----SPEE- 312
D IKVW+ Q KL ++GH V L+LS+E + L + A D+T + + +P+E
Sbjct: 213 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKER 272
Query: 313 -MK--KAALERYNK--IKGN-APE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
+K + + + K ++ + +P+ ++ +GS D +++W+ S++ ++ GH +N
Sbjct: 273 CVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD-TTSRRILYKLPGHAGSIN 331
Query: 365 HVYFSPDGQWVASASFDKSI 384
V F PD + SAS DK +
Sbjct: 332 EVAFHPDEPIIISASSDKRL 351
Score = 242 (90.2 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 87/328 (26%), Positives = 152/328 (46%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKC--VICLSGHTLAVTCV 246
LSGH+ + + P N SA D +W+V C L GH+ AV +
Sbjct: 62 LSGHEGEVYCCKFHP---NGST--LASAGFDRLILLWNV-YGDCDNYATLKGHSGAVMEL 115
Query: 247 KWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSL--ALSTEYALRTGAFDHT 303
+ DG ++++ S D T+ VW++ G+ ++ LKGH +VNS A + TG+ D T
Sbjct: 116 HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 175
Query: 304 GKQYSSPEEMKKAALERY-NKIK------GNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
K + + KKAA++ + N + + ++++SG D + +W+ +K T M
Sbjct: 176 VKLW---DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT-M 231
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWN----GTTGKFVAVFRGHVGPVYQIRFEL 412
GH V + S +G ++ S + D ++++W+ + V +F+G+V + L
Sbjct: 232 RGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV---HNFEKNL 288
Query: 413 IYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHAD 472
+ C SWS D + +GS D + VWD ++++ LPGHA
Sbjct: 289 LRC--------------------SWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAG 328
Query: 473 EVFAVDWSPDGEKVASGGKDRVLKLWMG 500
+ V + PD + S D+ +L+MG
Sbjct: 329 SINEVAFHPDEPIIISASSDK--RLYMG 354
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 267 (99.0 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 90/320 (28%), Positives = 154/320 (48%)
Query: 88 PQAVFRIRPVNRCSAT------IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
P A+ + P RCS+ ++GH V F P+G LAS D + LW++
Sbjct: 42 PGALLQAGPP-RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDC 100
Query: 142 PMFKCT-GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGIS 200
+ GH V+ + ++ DG L S S + WD +TG+ L GH ++ S
Sbjct: 101 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--S 157
Query: 201 WEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGS 258
P P + + S DG ++WD+ +K I +T V V + D +I +G
Sbjct: 158 CYPAR-RGP-QLVCTGSDDGTVKLWDIR-KKAAIQTFQNTYQVLAVTFNDTSDQII-SGG 213
Query: 259 QDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYS----SPEE- 312
D IKVW+ Q KL ++GH V L+LS+E + L + A D+T + + +P+E
Sbjct: 214 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKER 273
Query: 313 -MK--KAALERYNK--IKGN-APE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
+K + + + K ++ + +P+ ++ +GS D +++W+ S++ ++ GH +N
Sbjct: 274 CVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD-TTSRRILYKLPGHAGSIN 332
Query: 365 HVYFSPDGQWVASASFDKSI 384
V F PD + SAS DK +
Sbjct: 333 EVAFHPDEPIILSASSDKRL 352
Score = 242 (90.2 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 87/328 (26%), Positives = 152/328 (46%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKC--VICLSGHTLAVTCV 246
LSGH+ + + P N SA D +W+V C L GH+ AV +
Sbjct: 63 LSGHEGEVYCCKFHP---NGST--LASAGFDRLILLWNV-YGDCDNYATLKGHSGAVMEL 116
Query: 247 KWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSL--ALSTEYALRTGAFDHT 303
+ DG ++++ S D T+ VW++ G+ ++ LKGH +VNS A + TG+ D T
Sbjct: 117 HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 176
Query: 304 GKQYSSPEEMKKAALERY-NKIK------GNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
K + + KKAA++ + N + + ++++SG D + +W+ +K T M
Sbjct: 177 VKLW---DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT-M 232
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWN----GTTGKFVAVFRGHVGPVYQIRFEL 412
GH V + S +G ++ S + D ++++W+ + V +F+G+V + L
Sbjct: 233 RGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV---HNFEKNL 289
Query: 413 IYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHAD 472
+ C SWS D + +GS D + VWD ++++ LPGHA
Sbjct: 290 LRC--------------------SWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAG 329
Query: 473 EVFAVDWSPDGEKVASGGKDRVLKLWMG 500
+ V + PD + S D+ +L+MG
Sbjct: 330 SINEVAFHPDEPIILSASSDK--RLYMG 355
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 267 (99.0 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 89/320 (27%), Positives = 154/320 (48%)
Query: 88 PQAVFRIRPVNRCSAT------IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
P A+ + P RCS+ ++GH V F P+G LAS D + LW++
Sbjct: 42 PGALLQAGPP-RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDC 100
Query: 142 PMFKCT-GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGIS 200
+ GH V+ + ++ DG L S S + WD +TG+ L GH ++ S
Sbjct: 101 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--S 157
Query: 201 WEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGS 258
P P + + S DG ++WD+ +K + +T V V + D +I +G
Sbjct: 158 CYPAR-RGP-QLVCTGSDDGTVKLWDIR-KKAAVQTFQNTYQVLAVTFNDTSDQII-SGG 213
Query: 259 QDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYS----SPEE- 312
D IKVW+ Q KL ++GH V L+LS+E + L + A D+T + + +P+E
Sbjct: 214 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKER 273
Query: 313 -MK--KAALERYNK--IKGN-APE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
+K + + + K ++ + +P+ ++ +GS D +++W+ S++ ++ GH +N
Sbjct: 274 CVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD-TTSRRVLYKLPGHAGSIN 332
Query: 365 HVYFSPDGQWVASASFDKSI 384
V F PD + SAS DK +
Sbjct: 333 EVAFHPDEPIILSASSDKRL 352
Score = 240 (89.5 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 87/328 (26%), Positives = 152/328 (46%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKC--VICLSGHTLAVTCV 246
LSGH+ + + P N SA D +W+V C L GH+ AV +
Sbjct: 63 LSGHEGEVYCCKFHP---NGST--LASAGFDRLILLWNV-YGDCDNYATLKGHSGAVMEL 116
Query: 247 KWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSL--ALSTEYALRTGAFDHT 303
+ DG ++++ S D T+ VW++ G+ ++ LKGH +VNS A + TG+ D T
Sbjct: 117 HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 176
Query: 304 GKQYSSPEEMKKAALERY-NKIK------GNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
K + + KKAA++ + N + + ++++SG D + +W+ +K T M
Sbjct: 177 VKLW---DIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT-M 232
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWN----GTTGKFVAVFRGHVGPVYQIRFEL 412
GH V + S +G ++ S + D ++++W+ + V +F+G+V + L
Sbjct: 233 RGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV---HNFEKNL 289
Query: 413 IYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHAD 472
+ C SWS D + +GS D + VWD ++++ LPGHA
Sbjct: 290 LRC--------------------SWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAG 329
Query: 473 EVFAVDWSPDGEKVASGGKDRVLKLWMG 500
+ V + PD + S D+ +L+MG
Sbjct: 330 SINEVAFHPDEPIILSASSDK--RLYMG 355
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 266 (98.7 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 89/320 (27%), Positives = 153/320 (47%)
Query: 88 PQAVFRIRPVNRCSAT------IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
P A+ + P RCS+ ++GH V F P+G LAS D + LW++
Sbjct: 42 PGALLQAGPP-RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDC 100
Query: 142 PMFKCT-GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGIS 200
+ GH V+ + ++ DG L S S + WD +TG+ L GH ++ S
Sbjct: 101 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--S 157
Query: 201 WEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGS 258
P P + + S DG ++WD+ +K I +T V V + D +I +G
Sbjct: 158 CYPAR-RGP-QLVCTGSDDGTVKLWDIR-KKAAIQTFQNTYQVLAVTFNDTSDQII-SGG 213
Query: 259 QDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYS----SPEE- 312
D IKVW+ Q KL ++GH V L+LS+E + L + A D+T + + +P+E
Sbjct: 214 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKER 273
Query: 313 ---MKKAALERYNK--IKGN-APE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
+ + + + K ++ + +P+ ++ +GS D +++W+ S++ ++ GH +N
Sbjct: 274 CVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD-TTSRRILYKLPGHAGSIN 332
Query: 365 HVYFSPDGQWVASASFDKSI 384
V F PD + SAS DK +
Sbjct: 333 EVAFHPDEPIILSASSDKRL 352
Score = 242 (90.2 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 87/328 (26%), Positives = 152/328 (46%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKC--VICLSGHTLAVTCV 246
LSGH+ + + P N SA D +W+V C L GH+ AV +
Sbjct: 63 LSGHEGEVYCCKFHP---NGST--LASAGFDRLILLWNV-YGDCDNYATLKGHSGAVMEL 116
Query: 247 KWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSL--ALSTEYALRTGAFDHT 303
+ DG ++++ S D T+ VW++ G+ ++ LKGH +VNS A + TG+ D T
Sbjct: 117 HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 176
Query: 304 GKQYSSPEEMKKAALERY-NKIK------GNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
K + + KKAA++ + N + + ++++SG D + +W+ +K T M
Sbjct: 177 VKLW---DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT-M 232
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWN----GTTGKFVAVFRGHVGPVYQIRFEL 412
GH V + S +G ++ S + D ++++W+ + V +F+G+V + L
Sbjct: 233 RGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNV---HNFEKNL 289
Query: 413 IYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHAD 472
+ C SWS D + +GS D + VWD ++++ LPGHA
Sbjct: 290 LRC--------------------SWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAG 329
Query: 473 EVFAVDWSPDGEKVASGGKDRVLKLWMG 500
+ V + PD + S D+ +L+MG
Sbjct: 330 SINEVAFHPDEPIILSASSDK--RLYMG 355
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 280 (103.6 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 84/294 (28%), Positives = 141/294 (47%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH +A+ S+ FSP G+Q+ASGS D +V +W++ Q+ ++ TGHK+ V C+ +S L
Sbjct: 16 GHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLL 75
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
S S+ ++ W P K H TG S V +A + ++AS D ++W
Sbjct: 76 ASSSRDKTVRLWVPSV-KGESVLFRAH----TG-SVRSVCFSADGQSLLTASDDQSIKLW 129
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIR---ELKGHG 281
V +K + L H V C ++ DG + S D T+K+W+ + +LI E G+
Sbjct: 130 SVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYS 189
Query: 282 HWVNSLALSTEYALRTGAFDHTGKQYS-------SPEEMKKAALERYN-KIKGNAPERLV 333
+V+ ST + T + D+T + + ++ AA+ + GN L+
Sbjct: 190 SYVDFHPSST--CIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGN---HLL 244
Query: 334 SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
+ S D T+ + + + T + GHQ + V FS G ASA D+ + +W
Sbjct: 245 TASSDSTLKILDLLEGRLLYT-LHGHQGSASCVSFSRSGDQFASAGSDQQVMVW 297
Score = 216 (81.1 bits), Expect = 7.3e-15, P = 7.3e-15
Identities = 56/183 (30%), Positives = 87/183 (47%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT +V SV FS DG+ L + S D +++LW ++ Q + H NWV C +S
Sbjct: 95 SVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSP 154
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG--ISWEPVHLNAPCRRFVSASK 218
DG+ +VS S ++ WD S L H G S+ H ++ C +AS
Sbjct: 155 DGQLMVSVSDDRTVKLWDA-----SSRQLI-HTFCEPGGYSSYVDFHPSSTC--IATASS 206
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIREL 277
D R+WD+ + H+ AV + + G + T S D T+K+ + +G+L+ L
Sbjct: 207 DNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTL 266
Query: 278 KGH 280
GH
Sbjct: 267 HGH 269
Score = 164 (62.8 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 52/186 (27%), Positives = 89/186 (47%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKT-RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW- 387
+++ SGS D ++ +W + Q + R TGH+ V V FSP +AS+S DK+++LW
Sbjct: 31 KQIASGSVDASVMVWN--MKPQSRAYRFTGHKDAVTCVQFSPSAHLLASSSRDKTVRLWV 88
Query: 388 NGTTGKFVAVFRGHVGPVYQIRFE-----LIYCFRYPS-NFYCV--VDMSCCMSLYS-W- 437
G+ V +FR H G V + F L+ S + V + C + ++ W
Sbjct: 89 PSVKGESV-LFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWV 147
Query: 438 -----SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKD 492
S D +L++S S D T+K+WD +++L VD+ P +A+ D
Sbjct: 148 RCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSD 207
Query: 493 RVLKLW 498
+++W
Sbjct: 208 NTVRVW 213
Score = 162 (62.1 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 53/184 (28%), Positives = 83/184 (45%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
+ L++ SDD ++ LW K T + H V FSPDGQ + S S D+++KLW+
Sbjct: 115 QSLLTASDDQSIKLWSVHRQKIICT-LREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDA 173
Query: 390 TTGKFVAVFRGHVGPVYQIRFE-LIYCFRYPS--NFYCVVDM------------SCCMSL 434
++ + + F G + F C S N V D+ S ++
Sbjct: 174 SSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNA 233
Query: 435 YSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
S+ LL+ S DSTLK+ D+ +L L GH V +S G++ AS G D+
Sbjct: 234 LSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQ 293
Query: 495 LKLW 498
+ +W
Sbjct: 294 VMVW 297
Score = 158 (60.7 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 49/156 (31%), Positives = 74/156 (47%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----L 412
GH+ + + FSP G+ +AS S D S+ +WN F GH V ++F L
Sbjct: 16 GHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLL 75
Query: 413 IYCFR-------YPS-NFYCVVDMSCCMSLYS--WSADSRLLLSGSKDSTLKVWDIRTQK 462
R PS V+ + S+ S +SAD + LL+ S D ++K+W + QK
Sbjct: 76 ASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQK 135
Query: 463 LKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+ L H + V +SPDG+ + S DR +KLW
Sbjct: 136 IICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLW 171
>UNIPROTKB|Q3SZK1 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9913 "Bos taurus" [GO:0045766 "positive regulation of
angiogenesis" evidence=NAS] [GO:0010595 "positive regulation of
endothelial cell migration" evidence=IMP] [GO:0014909 "smooth
muscle cell migration" evidence=ISS] [GO:0009986 "cell surface"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BC102815 IPI:IPI00693899
RefSeq:NP_001070463.1 UniGene:Bt.20293 ProteinModelPortal:Q3SZK1
STRING:Q3SZK1 PRIDE:Q3SZK1 Ensembl:ENSBTAT00000005126 GeneID:767919
KEGG:bta:767919 CTD:14 GeneTree:ENSGT00690000102167
HOGENOM:HOG000261676 HOVERGEN:HBG061307 InParanoid:Q3SZK1
OMA:VWSFEVG OrthoDB:EOG4D26PX NextBio:20918276 ArrayExpress:Q3SZK1
GO:GO:0001525 GO:GO:0045766 GO:GO:0010595 GO:GO:0014909
Uniprot:Q3SZK1
Length = 434
Score = 241 (89.9 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 89/349 (25%), Positives = 150/349 (42%)
Query: 85 VYQPQ--AVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLNTQT 141
V +PQ V + + T A H+ +V V+ P LA +G D +W L+
Sbjct: 66 VLEPQEGVVGSMEGPDDSEVTFALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGE 125
Query: 142 PMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
+F+C GHK+ V C +S D + +G +G L+ W T + + +G +W+ W
Sbjct: 126 LLFECAGHKDSVTCAGFSHDSTLVATGDMSGLLKVWQVDTKEEVWSFEAGDLEWM---EW 182
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQD 260
P AP ++ + DG+ +W V C G TC + DG G +D
Sbjct: 183 HP---RAPV--LLAGTADGNTWMWKVPTGDCKT-FQGPNCPATCGRVLPDGKRAVVGYED 236
Query: 261 CTIKVWETTQGKLIRELKG-HGHW--VNSLALSTEYAL-RTGAFDHTGKQYSS------- 309
TI++W+ QG I LKG GH + +A + + +L TG+ D K S+
Sbjct: 237 GTIRIWDLKQGNSIHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQAKLVSATTGKVVG 296
Query: 310 ---PEEM-KKAALERYNKIKGNAPERL---------VSGSDDFTMFLWEPAVSKQPKTRM 356
PE + + +L + + N+ E L G D T+ +++ +S Q
Sbjct: 297 VFRPETVASQPSLGEGEESESNSVESLGFCSVMPLAAVGYLDGTLAIYD--LSTQTLRHQ 354
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
HQ + + + V + S D ++LW+ TG+ + +RGH +
Sbjct: 355 CQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLLTDYRGHTAEI 403
Score = 164 (62.8 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 55/204 (26%), Positives = 92/204 (45%)
Query: 118 PDGRQLASGSGDTTVRLWDLN--TQTPMFKCT-GHKNWVLCIAWSADGKHLVSGSKAGEL 174
PDG++ G D T+R+WDL + K T GH+ + C+A + DG +++GS +
Sbjct: 225 PDGKRAVVGYEDGTIRIWDLKQGNSIHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQA 284
Query: 175 QCWDPQTGKPSG--NPLSGHKKWITGISWEPVHLNAPCRRFVSASK-------DGDARIW 225
+ TGK G P + + G E + F S DG I+
Sbjct: 285 KLVSATTGKVVGVFRPETVASQPSLGEGEESESNSVESLGFCSVMPLAAVGYLDGTLAIY 344
Query: 226 DVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
D+S + + H + + W G V+YT S D +++W+ G+L+ + +GH +
Sbjct: 345 DLSTQT-LRHQCQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLLTDYRGHTAEI 403
Query: 285 NSLALSTEYALR-TGAFDHTGKQY 307
ALS + +L T + DH K +
Sbjct: 404 LDFALSKDASLVVTTSGDHKAKVF 427
Score = 138 (53.6 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 69/293 (23%), Positives = 111/293 (37%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
V+ +D A +W +S + + +GH +VTC + D ++ TG +KVW+ +
Sbjct: 108 VTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDSTLVATGDMSGLLKVWQVDTKE 167
Query: 273 LIRELK-GHGHWVNSLALSTEYALRTGAFDHTGKQYSSPE-EMKKAALERYNKIKGNA-P 329
+ + G W+ + L G D + P + K G P
Sbjct: 168 EVWSFEAGDLEWMEWHPRAP--VLLAGTADGNTWMWKVPTGDCKTFQGPNCPATCGRVLP 225
Query: 330 E--RLVSGSDDFTMFLWE--PAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
+ R V G +D T+ +W+ S GHQ + V + DG + + S D K
Sbjct: 226 DGKRAVVGYEDGTIRIWDLKQGNSIHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQAK 285
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLL 445
L + TTGK V VFR E S V + C + L
Sbjct: 286 LVSATTGKVVGVFRPETVASQPSLGE-----GEESESNSVESLGFCSVM-------PLAA 333
Query: 446 SGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
G D TL ++D+ TQ L+ H + + W V + D +++LW
Sbjct: 334 VGYLDGTLAIYDLSTQTLRHQCQ-HQSGIVQLLWEAGTAVVYTCSLDGIVRLW 385
Score = 85 (35.0 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
W A + ++ + S D +++WD RT +L D GH E+ S D V + D K
Sbjct: 366 WEAGTAVVYTCSLDGIVRLWDARTGRLLTDYRGHTAEILDFALSKDASLVVTTSGDHKAK 425
Query: 497 LW 498
++
Sbjct: 426 VF 427
>RGD|1306281 [details] [associations]
symbol:Aamp "angio-associated, migratory cell protein"
species:10116 "Rattus norvegicus" [GO:0009986 "cell surface"
evidence=IEA;ISO] [GO:0014909 "smooth muscle cell migration"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306281 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 CTD:14
GeneTree:ENSGT00690000102167 OMA:VWSFEVG EMBL:CH474004
RefSeq:NP_001100390.1 UniGene:Rn.13592 ProteinModelPortal:G3V7V2
PRIDE:G3V7V2 Ensembl:ENSRNOT00000019497 GeneID:301512
KEGG:rno:301512 NextBio:648863 Uniprot:G3V7V2
Length = 435
Score = 240 (89.5 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 89/349 (25%), Positives = 151/349 (43%)
Query: 85 VYQPQ--AVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLNTQT 141
V +PQ V + + T A H+ +V V+ P LA +G D +W L+
Sbjct: 67 VLEPQEGVVGSMEGPDDSEVTFALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGE 126
Query: 142 PMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
+F+C GHK+ V C +S D + +G +G L+ W +T + + +G +W+ W
Sbjct: 127 LLFECAGHKDSVTCAGFSHDSTLVATGDMSGLLKVWQVETKEEVWSFEAGDLEWM---EW 183
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQD 260
P AP ++ + DG+ +W V C G TC + DG G +D
Sbjct: 184 HP---RAPV--LLAGTADGNTWMWKVPNGDCKT-FQGPNCPATCGRVLPDGKRAVVGYED 237
Query: 261 CTIKVWETTQGKLIRELKG-HGHW--VNSLALSTEYAL-RTGAFDHTGKQYSS------- 309
TI++W+ QG I LKG GH + +A + + +L TG+ D K S+
Sbjct: 238 GTIRIWDLKQGNPIHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQAKLVSATTGKVVG 297
Query: 310 ---PEEM-KKAALERYNKIKGNAPERL---------VSGSDDFTMFLWEPAVSKQPKTRM 356
PE + + +L + + N+ E L G D T+ +++ +S Q
Sbjct: 298 VFRPETVASQPSLGEGEESESNSVESLGFCSVMPLAAVGYLDGTLAIYD--LSTQTLRHQ 355
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
HQ + + + V + S D ++LW+ TG+ + +RGH +
Sbjct: 356 CQHQSGIVQLLWEAGTAVVYTCSLDGVVRLWDARTGRLLTDYRGHTAEI 404
Score = 172 (65.6 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 56/204 (27%), Positives = 93/204 (45%)
Query: 118 PDGRQLASGSGDTTVRLWDLNTQTPM--FKCT-GHKNWVLCIAWSADGKHLVSGSKAGEL 174
PDG++ G D T+R+WDL P+ K T GH+ + C+A + DG +++GS +
Sbjct: 226 PDGKRAVVGYEDGTIRIWDLKQGNPIHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQA 285
Query: 175 QCWDPQTGKPSG--NPLSGHKKWITGISWEPVHLNAPCRRFVSASK-------DGDARIW 225
+ TGK G P + + G E + F S DG I+
Sbjct: 286 KLVSATTGKVVGVFRPETVASQPSLGEGEESESNSVESLGFCSVMPLAAVGYLDGTLAIY 345
Query: 226 DVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
D+S + + H + + W G V+YT S D +++W+ G+L+ + +GH +
Sbjct: 346 DLSTQT-LRHQCQHQSGIVQLLWEAGTAVVYTCSLDGVVRLWDARTGRLLTDYRGHTAEI 404
Query: 285 NSLALSTEYALR-TGAFDHTGKQY 307
ALS + +L T + DH K +
Sbjct: 405 LDFALSKDASLVVTTSGDHKAKVF 428
Score = 138 (53.6 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 70/293 (23%), Positives = 112/293 (38%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
V+ +D A +W +S + + +GH +VTC + D ++ TG +KVW+ +
Sbjct: 109 VTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDSTLVATGDMSGLLKVWQVETKE 168
Query: 273 LIRELK-GHGHWVNSLALSTEYALRTGAFDHTGKQYSSPE-EMKKAALERYNKIKGNA-P 329
+ + G W+ + L G D + P + K G P
Sbjct: 169 EVWSFEAGDLEWMEWHPRAP--VLLAGTADGNTWMWKVPNGDCKTFQGPNCPATCGRVLP 226
Query: 330 E--RLVSGSDDFTMFLWEPAVSKQPKT-RMT-GHQQLVNHVYFSPDGQWVASASFDKSIK 385
+ R V G +D T+ +W+ + T GHQ + V + DG + + S D K
Sbjct: 227 DGKRAVVGYEDGTIRIWDLKQGNPIHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQAK 286
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLL 445
L + TTGK V VFR E S V + C + L
Sbjct: 287 LVSATTGKVVGVFRPETVASQPSLGE-----GEESESNSVESLGFCSVM-------PLAA 334
Query: 446 SGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
G D TL ++D+ TQ L+ H + + W V + D V++LW
Sbjct: 335 VGYLDGTLAIYDLSTQTLRHQCQ-HQSGIVQLLWEAGTAVVYTCSLDGVVRLW 386
Score = 86 (35.3 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
W A + ++ + S D +++WD RT +L D GH E+ S D V + D K
Sbjct: 367 WEAGTAVVYTCSLDGVVRLWDARTGRLLTDYRGHTAEILDFALSKDASLVVTTSGDHKAK 426
Query: 497 LW 498
++
Sbjct: 427 VF 428
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 283 (104.7 bits), Expect = 2.3e-22, P = 2.3e-22
Identities = 107/377 (28%), Positives = 176/377 (46%)
Query: 39 SQIVNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVN 98
SQ++ K + +K+ A +S L G H+++ E S+V + A +IRP
Sbjct: 93 SQVITKFSDPNKKI--AGQVSMQSLEKIKGVPEAAHRIAGESQASLVKRTLAE-QIRPEW 149
Query: 99 RCSAT----IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
T I+GH V V P + +G+GD T+++WDL + TGH V
Sbjct: 150 HAPWTLMRVISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVR 209
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+A S +L S + ++CWD +T K + GH + + P L+ V
Sbjct: 210 GLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRH-YHGHLSGVYALKLHPT-LDV----LV 263
Query: 215 SASKDGDARIWDVSLRKCVICLSGH--TLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGK 272
+A +D AR+WD+ R+ V LSGH T+A V+ D + TGS D TI++W+ GK
Sbjct: 264 TAGRDAVARVWDMRTRQNVHVLSGHKSTVASLAVQ-EFDPQVVTGSMDSTIRLWDLAAGK 322
Query: 273 LIRELKGHGHWVNSLALST-EYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----N 327
+ L H V +L+L E+ +G+ D+ K + PE E +N I N
Sbjct: 323 TLTTLTHHKKTVRALSLHPDEFTFASGSSDNI-KHWKFPEGAFMGNFEGHNAIVNTLSIN 381
Query: 328 APERLVSGSDDFTMFLWEPAVSKQPKTRMTGH--QQLVNHVY-FSPDGQ-WVASASFDKS 383
+ + SG+D+ +M W+ +GH Q+L + V S D + + ++SFDK+
Sbjct: 382 SDNVMFSGADNGSMCFWD---------WKSGHKYQELQSVVQPGSLDSEAGIFASSFDKT 432
Query: 384 -IKLWNGTTGKFVAVFR 399
++L K V +++
Sbjct: 433 GLRLITCEADKSVKIYK 449
Score = 171 (65.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 59/220 (26%), Positives = 96/220 (43%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ + EP + + F + + D +IWD++ + L+GH V +
Sbjct: 159 ISGHLGWVRCVDVEPGN-----QWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAV 213
Query: 249 GG-DGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ +D +K W+ K+IR GH V +L L T L T D +
Sbjct: 214 SPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARV 273
Query: 307 YSSPEEMKKAALERYNK-IKGNAPE----RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ L + + A + ++V+GS D T+ LW+ A K T +T H++
Sbjct: 274 WDMRTRQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKT-LTTLTHHKK 332
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
V + PD AS S D +IK W G F+ F GH
Sbjct: 333 TVRALSLHPDEFTFASGSSD-NIKHWKFPEGAFMGNFEGH 371
Score = 152 (58.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 50/181 (27%), Positives = 80/181 (44%)
Query: 334 SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK 393
+G+ D T+ +W+ A S K +TGH V + SP ++ S DK +K W+ T K
Sbjct: 180 TGAGDRTIKIWDLA-SGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLETNK 238
Query: 394 FVAVFRGHVGPVYQIRFE---------------LIYCFRYPSNFYCVVD-MSCCMSLYSW 437
+ + GH+ VY ++ ++ R N + + S SL
Sbjct: 239 VIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVHVLSGHKSTVASLAVQ 298
Query: 438 SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKL 497
D +++ +GS DST+++WD+ K L H V A+ PD ASG D + K
Sbjct: 299 EFDPQVV-TGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSLHPDEFTFASGSSDNI-KH 356
Query: 498 W 498
W
Sbjct: 357 W 357
Score = 127 (49.8 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 54/224 (24%), Positives = 93/224 (41%)
Query: 306 QYSSPEEM--KKAALERYNKIKGNAPERL--VSGSDDFTMFLWEPAVSKQPK-----TRM 356
++S P + + +++ KIKG PE ++G ++ A +P+ T M
Sbjct: 98 KFSDPNKKIAGQVSMQSLEKIKG-VPEAAHRIAGESQASLVKRTLAEQIRPEWHAPWTLM 156
Query: 357 ---TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELI 413
+GH V V P QW + + D++IK+W+ +G GH+ V +
Sbjct: 157 RVISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSP- 215
Query: 414 YCFRYPSNFYCVVD-MSCCMSL----------------YSWSADSRL--LLSGSKDSTLK 454
R+P F C D M C L Y+ L L++ +D+ +
Sbjct: 216 ---RHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVAR 272
Query: 455 VWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
VWD+RT++ L GH V ++ +V +G D ++LW
Sbjct: 273 VWDMRTRQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLW 316
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 283 (104.7 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 85/293 (29%), Positives = 137/293 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH A+ SV FSP+G+QLA+GS DT + LW L Q F+ GHK+ + + +S G L
Sbjct: 16 GHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLGNLL 75
Query: 166 VSGSKAGELQCWDP-QTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
S S+ ++ W P + GK S H + + + +A + SAS+D ++
Sbjct: 76 ASASRDRTIRLWIPDKRGKSS--EFKAHTAPVRSVDF-----SADGQFLASASEDKSIKV 128
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
W++ ++ + L HT V C K+ DG +I + S+D TIK+W+TT + + +
Sbjct: 129 WNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGF 188
Query: 284 VNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA------PER--LVS 334
N +A + + + DHT K + + K L+ Y G P L++
Sbjct: 189 ANFVAFNPNGTCIASAGSDHTVKIWDI--RVNKL-LQHYQVHSGGVNCVSFHPSGNYLIT 245
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GH V V FS G+ S D + LW
Sbjct: 246 ASSDGTLKILDLLEGRLIYT-LQGHTGPVFTVSFSKGGELFTSGGADAQVLLW 297
Score = 250 (93.1 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 59/181 (32%), Positives = 93/181 (51%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S+ HT V SV FS DG+ LAS S D ++++W++ Q ++ H +WV C +S
Sbjct: 95 SSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSP 154
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S+ ++ WD T K N S + +++ P N C SA D
Sbjct: 155 DGRLIVSCSEDKTIKIWDT-TNKQCVNNFSDFVGFANFVAFNP---NGTC--IASAGSDH 208
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
+IWD+ + K + H+ V CV + G + T S D T+K+ + +G+LI L+G
Sbjct: 209 TVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTLQG 268
Query: 280 H 280
H
Sbjct: 269 H 269
Score = 190 (71.9 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 74/222 (33%), Positives = 110/222 (49%)
Query: 308 SSPEEMKKAALERYNKIKGN---------AP--ERLVSGSDDFTMFLWEPAVSKQPKT-R 355
SSPE+ LERY KG+ +P ++L +GS D + LW ++ Q + R
Sbjct: 3 SSPED---PVLERY--FKGHKAAITSVDFSPNGKQLATGSWDTFLMLW--SLRPQARAFR 55
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLW-NGTTGKFVAVFRGHVGPVYQIRFELIY 414
GH+ ++ V FSP G +ASAS D++I+LW GK + F+ H PV + F
Sbjct: 56 YVGHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKS-SEFKAHTAPVRSVDFSADG 114
Query: 415 CFRYPSN---FYCVVDMSCCMSLYS------W------SADSRLLLSGSKDSTLKVWDIR 459
F ++ V +M LYS W S D RL++S S+D T+K+WD
Sbjct: 115 QFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTT 174
Query: 460 TQKLKQDLPGHADEV-FA--VDWSPDGEKVASGGKDRVLKLW 498
KQ + +D V FA V ++P+G +AS G D +K+W
Sbjct: 175 N---KQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIW 213
Score = 157 (60.3 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 52/182 (28%), Positives = 80/182 (43%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L S S+D ++ +W ++ + H V FSPDG+ + S S DK+IK+W+ T
Sbjct: 117 LASASEDKSIKVWN-MYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN 175
Query: 392 GKFVAVFRGHVGPVYQIRFELI-YCFRYPSNFYCV----VDMSCCMSLY----------S 436
+ V F VG + F C + + V + ++ + Y S
Sbjct: 176 KQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVS 235
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+ L++ S D TLK+ D+ +L L GH VF V +S GE SGG D +
Sbjct: 236 FHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVL 295
Query: 497 LW 498
LW
Sbjct: 296 LW 297
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 265 (98.3 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 64/202 (31%), Positives = 102/202 (50%)
Query: 104 IAGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H V S+ GR LA+G D V LW +N + TGH + V + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S+D +
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLMGHKANICSLDFHPYG------EFVASGSQDTN 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + CV GH+ AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 281 GHWVNSLALS-TEYALRTGAFD 301
VN + EY L +G+ D
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSD 210
Score = 204 (76.9 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 58/166 (34%), Positives = 79/166 (47%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + +W + I L GH V S+ L+T L A +G E
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIV-AGSQSGSIRVWDLE 93
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P E + SGS D + LW+ K R GH Q V
Sbjct: 94 AAKI-LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVR 151
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+ FSPDG+W+ASA+ D ++KLW+ T GK ++ F GH GPV + F
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 197
Score = 165 (63.1 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 34/101 (33%), Positives = 52/101 (51%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ F P G +ASGS DT ++LWD+ + +F+ GH V C+ +S DG
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
K L S + ++ WD GK GH + + + P
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSE-FPGHTGPVNVVEFHP 199
Score = 148 (57.2 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 48/186 (25%), Positives = 81/186 (43%)
Query: 324 IKGNAPERLVS-GSDDFTMFLWEPAVSKQPKTR-MTGHQQLVNHVYFSPDGQWVASASFD 381
+ G A RL++ G DD + LW +++K +TGH V V + + + + S
Sbjct: 27 VLGKASGRLLATGGDDCRVNLW--SINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQS 84
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQIRF----ELIYCFRYPSNFY--------CVVDM- 428
SI++W+ K + GH + + F E + +N CV
Sbjct: 85 GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYR 144
Query: 429 --SCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKV 486
S + +S D + L S + D T+K+WD+ K+ + PGH V V++ P+ +
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 487 ASGGKD 492
ASG D
Sbjct: 205 ASGSSD 210
Score = 128 (50.1 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 22/56 (39%), Positives = 38/56 (67%)
Query: 443 LLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L+++GS+ +++VWD+ K+ + L GH + ++D+ P GE VASG +D +KLW
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 132
Score = 123 (48.4 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 28/70 (40%), Positives = 38/70 (54%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C GH++AV + FSPDG+ LAS + D TV+LWDL M + GH V + +
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 160 ADGKHLVSGS 169
+ L SGS
Sbjct: 199 PNEYLLASGS 208
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 278 (102.9 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 79/292 (27%), Positives = 135/292 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH +A+ SV FS + +QLASGS D+ + +W + Q+ ++ GHK+ V C+ +S G L
Sbjct: 17 GHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLL 76
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
SGS+ ++ W P K H + VH + + V+AS D ++W
Sbjct: 77 ASGSRDKTVRIWIPNV-KGESTVFRAHTATVRS-----VHFCSDGQSLVTASDDKTVKVW 130
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
+K + LS H V C ++ DG +I + S D T+K+W+ T + + HG +V
Sbjct: 131 STHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFV 190
Query: 285 NSLALSTE-YALRTGAFDHTGKQYS-------SPEEMKKAALERYN-KIKGNAPERLVSG 335
+ + + D+T K + ++ AA+ + GN L++
Sbjct: 191 TYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNY---LLTA 247
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GHQ V FS G++ AS D+ + +W
Sbjct: 248 SSDSTLKILDLMEGRLLYT-LHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 250 (93.1 bits), Expect = 7.7e-19, P = 7.7e-19
Identities = 61/205 (29%), Positives = 100/205 (48%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT V SV F DG+ L + S D TV++W + Q +F + H NWV C +S
Sbjct: 96 STVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSP 155
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S ++ WD +T + + H ++T + + P + C +AS D
Sbjct: 156 DGRLIVSASDDKTVKLWD-KTSRECVHSYCEHGGFVTYVDFHP---SGTC--IAAASMDN 209
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
++WDV + + H+ AV + + G + T S D T+K+ + +G+L+ L G
Sbjct: 210 TVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHG 269
Query: 280 HGHWVNSLALSTEYALRTGAFDHTG 304
H ++A S RTG + +G
Sbjct: 270 HQGPATTVAFS-----RTGEYFASG 289
Score = 245 (91.3 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 73/218 (33%), Positives = 105/218 (48%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ ++P +R + AGH +AV V FSP G LASGS D TVR+W N + H
Sbjct: 45 VWHMKPQSR-AYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHT 103
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPC 210
V + + +DG+ LV+ S ++ W K + LS H W+ + P
Sbjct: 104 ATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFS-LSQHINWVRCARFSP-----DG 157
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETT 269
R VSAS D ++WD + R+CV H VT V + G I S D T+KVW+
Sbjct: 158 RLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVR 217
Query: 270 QGKLIRELKGHGHWVNSLAL--STEYALRTGAFDHTGK 305
+L++ + H VN+L+ S Y L T + D T K
Sbjct: 218 THRLLQHYQLHSAAVNALSFHPSGNYLL-TASSDSTLK 254
Score = 181 (68.8 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 59/184 (32%), Positives = 86/184 (46%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
+ LV+ SDD T+ +W K + ++ H V FSPDG+ + SAS DK++KLW+
Sbjct: 116 QSLVTASDDKTVKVWSTHRQKFLFS-LSQHINWVRCARFSPDGRLIVSASDDKTVKLWDK 174
Query: 390 TTGKFVAVFRGHVGPVYQIRFELI-YCFRYPS--NFYCVVDM------------SCCMSL 434
T+ + V + H G V + F C S N V D+ S ++
Sbjct: 175 TSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNA 234
Query: 435 YSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
S+ LL+ S DSTLK+ D+ +L L GH V +S GE ASGG D
Sbjct: 235 LSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQ 294
Query: 495 LKLW 498
+ +W
Sbjct: 295 VMVW 298
Score = 180 (68.4 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 53/185 (28%), Positives = 82/185 (44%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKT-RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
++L SGS D + +W + Q + R GH+ V V FSP G +AS S DK++++W
Sbjct: 32 KQLASGSMDSCLMVWH--MKPQSRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWI 89
Query: 389 GTTGKFVAVFRGHVGPVYQIRF-----ELIYCFRYPS-NFYCVVDMSCCMSL---YSW-- 437
VFR H V + F L+ + + SL +W
Sbjct: 90 PNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVR 149
Query: 438 ----SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 493
S D RL++S S D T+K+WD +++ H V VD+ P G +A+ D
Sbjct: 150 CARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDN 209
Query: 494 VLKLW 498
+K+W
Sbjct: 210 TVKVW 214
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+S +++ L SGS DS L VW ++ Q GH D V V++SP G +ASG +D+ ++
Sbjct: 27 FSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVR 86
Query: 497 LWM 499
+W+
Sbjct: 87 IWI 89
Score = 118 (46.6 bits), Expect = 0.00058, P = 0.00058
Identities = 39/156 (25%), Positives = 66/156 (42%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----L 412
GH+ + V FS + + +AS S D + +W+ F GH V + F L
Sbjct: 17 GHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLL 76
Query: 413 IYCFRYPSNFYCVVDMSCCMSLYS----------WSADSRLLLSGSKDSTLKVWDIRTQK 462
R + + ++ +++ + +D + L++ S D T+KVW QK
Sbjct: 77 ASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQK 136
Query: 463 LKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L H + V +SPDG + S D+ +KLW
Sbjct: 137 FLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLW 172
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 245 (91.3 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 83/272 (30%), Positives = 125/272 (45%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
LSGH VT V + ++ + S+D TIKVW+ G R LKGH V ++ T
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGK 163
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYN----KIKGNAPERLVSGSDDFTMFLWEPA 347
L + + D T K + E ++ +N I N + +VS S D TM +WE A
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTMKMWEVA 222
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
KT TGH++ V V + DG +AS S D+++++W T + A R H
Sbjct: 223 TGYCVKT-FTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHE----- 276
Query: 408 IRFELIYCFRY-PSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQD 466
++ C + P + + + + LLSGS+D T+K+WDI T
Sbjct: 277 ---HVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMT 333
Query: 467 LPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L GH + V V + P G V S D+ L++W
Sbjct: 334 LVGHDNWVRGVLFHPGGRFVVSCADDKTLRIW 365
Score = 233 (87.1 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 60/206 (29%), Positives = 96/206 (46%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ TG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTMKMWEVATGY-CVKTFTGHREWVRMV--RP---NQDGTLLASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDISTGMCLMTLVGHDNWVRGV 344
Score = 221 (82.9 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 66/224 (29%), Positives = 103/224 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP--VH------------ 205
DG L S S ++ W T K L H+ + ISW P H
Sbjct: 244 QDGTLLASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESAHPTISEATGSENK 302
Query: 206 -LNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDCT 262
P +S S+D ++WD+S C++ L GH V V + GG V+ + + D T
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVV-SCADDKT 361
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+++W+ + ++ L H H+V SL + TG+ D T K
Sbjct: 362 LRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVK 405
Score = 211 (79.3 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 62/189 (32%), Positives = 87/189 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T GH E V V + DG LAS S D TVR+W + T+ + H++ V CI+W+
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Query: 160 ADGKH--------------------LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ H L+SGS+ ++ WD TG L GH W+ G+
Sbjct: 286 PESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMT-LVGHDNWVRGV 344
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG-GDGVIYTGS 258
+ P R VS + D RIWD ++C+ LS H VT + + + TGS
Sbjct: 345 LFHPGG-----RFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGS 399
Query: 259 QDCTIKVWE 267
D T+KVWE
Sbjct: 400 VDQTVKVWE 408
Score = 194 (73.4 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 59/204 (28%), Positives = 93/204 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTMK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V+ CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTEYALRTGAFDHTGKQ 306
V ++ + E A T + + TG +
Sbjct: 278 VVECISWAPESAHPTIS-EATGSE 300
Score = 185 (70.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 79/335 (23%), Positives = 140/335 (41%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD + G L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFE-RTLKGHTDSVQDISFDQ 160
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
+ S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 161 TG-----KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
T+K+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF 380
+ E +V W P + + TG + N P G ++ S S
Sbjct: 275 H--------EHVVE------CISWAPESAHPTISEATGSE---NKKSGKP-GPFLLSGSR 316
Query: 381 DKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----LIYC--------FRYPSNFYCVVD 427
DK+IK+W+ +TG + GH V + F ++ C + Y N C+
Sbjct: 317 DKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDY-KNKRCMKT 375
Query: 428 MSC---CMSLYSWSADSRLLLSGSKDSTLKVWDIR 459
+S ++ + S +++GS D T+KVW+ R
Sbjct: 376 LSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
Score = 160 (61.4 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 58/226 (25%), Positives = 101/226 (44%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 94 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SLMVSASEDATIKVWDYEAGDFERTL 146
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 147 KGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLVSG-SDDFTMFLWEPAVS 349
+ + + D T K + +K R ++ N L++ S+D T+ +W A +
Sbjct: 207 IVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVVA-T 265
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
K+ K + H+ +V + ++P+ + S +G G F+
Sbjct: 266 KECKAELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFL 311
Score = 156 (60.0 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 53/211 (25%), Positives = 95/211 (45%)
Query: 305 KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP-KTRMTGHQQLV 363
K+++S ++K +E +K+ A E + G + + + P K ++GH+ V
Sbjct: 53 KKWTSVIRLQKKVMELESKLN-EAKEEITLGGPVGQKRDPKEWIPRPPEKYALSGHRSPV 111
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----LIYCFRY 418
V F P + SAS D +IK+W+ G F +GH V I F+ L C
Sbjct: 112 TRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSAD 171
Query: 419 PS-------NFYCVVDM---SCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP 468
+ F C+ M +S + + ++S S+D T+K+W++ T +
Sbjct: 172 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFT 231
Query: 469 GHADEVFAVDWSPDGEKVASGGKDRVLKLWM 499
GH + V V + DG +AS D+ +++W+
Sbjct: 232 GHREWVRMVRPNQDGTLLASCSNDQTVRVWV 262
Score = 91 (37.1 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 16/57 (28%), Positives = 32/57 (56%)
Query: 442 RLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
R ++S + D TL++WD + ++ + L H V ++D+ V +G D+ +K+W
Sbjct: 351 RFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVW 407
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 291 (107.5 bits), Expect = 3.2e-22, P = 3.2e-22
Identities = 87/313 (27%), Positives = 153/313 (48%)
Query: 92 FRIRPVNRCSATIAGHTEAVLS-VAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
+R RPV + + GH + V++ + FS G ++ SGS D T+++W + GH
Sbjct: 979 WRSRPVRK-PKVLKGHDDHVITCLQFS--GNRIVSGSDDNTLKVWSAVNGKCLRTLVGHT 1035
Query: 151 NWVLCIAWSAD--GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA 208
V WS+ G ++SGS L+ WD +G + L GH + +HL+
Sbjct: 1036 GGV----WSSQMSGNIIISGSTDRTLKVWDMDSGA-CVHTLQGHTSTV-----RCMHLHG 1085
Query: 209 PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWET 268
+ VS S+D R+WD+ C+ L GH AV CV++ G +I +G+ D +K+W
Sbjct: 1086 S--KVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYDGK-LIVSGAYDYMVKIWHP 1142
Query: 269 TQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA 328
+ + + L+GH + V SL + + +G+ D + + + K L + +
Sbjct: 1143 ERQECLHTLQGHTNRVYSLQFDGLHVV-SGSLDTSIRVWDVETGNCKHTLMGHQSLTSGM 1201
Query: 329 PER---LVSGSDDFTMFLWEPAVSKQPKTRMTG---HQQLVNHVYFSPDGQWVASASFDK 382
R LVSG+ D T+ +W+ + +T ++G H V + F+ ++V ++S D
Sbjct: 1202 ELRQNILVSGNADSTVKVWDITTGQCLQT-LSGPNKHHSAVTCLQFN--SRFVVTSSDDG 1258
Query: 383 SIKLWNGTTGKFV 395
++KLW+ TG F+
Sbjct: 1259 TVKLWDVKTGDFI 1271
Score = 236 (88.1 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 61/193 (31%), Positives = 97/193 (50%)
Query: 90 AVFRIRPVNR--CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT 147
A R+ + + C + GH AV V + DG+ + SG+ D V++W Q +
Sbjct: 1095 ATLRVWDIEQGSCLHVLVGHLAAVRCVQY--DGKLIVSGAYDYMVKIWHPERQECLHTLQ 1152
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLN 207
GH N V + + DG H+VSGS ++ WD +TG + L GH+ +G+ + N
Sbjct: 1153 GHTNRVYSLQF--DGLHVVSGSLDTSIRVWDVETGNCK-HTLMGHQSLTSGME---LRQN 1206
Query: 208 APCRRFVSASKDGDARIWDVSLRKCVICLSG---HTLAVTCVKWGGDGVIYTGSQDCTIK 264
VS + D ++WD++ +C+ LSG H AVTC+++ V+ T S D T+K
Sbjct: 1207 I----LVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSRFVV-TSSDDGTVK 1261
Query: 265 VWETTQGKLIREL 277
+W+ G IR L
Sbjct: 1262 LWDVKTGDFIRNL 1274
Score = 228 (85.3 bits), Expect = 3.0e-15, P = 3.0e-15
Identities = 77/281 (27%), Positives = 129/281 (45%)
Query: 236 LSGHT-LAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
L GH +TC+++ G+ ++ +GS D T+KVW GK +R L GH V S +S
Sbjct: 990 LKGHDDHVITCLQFSGNRIV-SGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSGNII 1048
Query: 295 LRTGAFDHTGKQYSSPEEMKKAALERYN---KIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
+ +G+ D T K + L+ + + ++VSGS D T+ +W+
Sbjct: 1049 I-SGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSKVVSGSRDATLRVWDIEQGSC 1107
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE 411
+ GH V V + DG+ + S ++D +K+W+ + + +GH VY ++F+
Sbjct: 1108 LHV-LVGHLAAVRCVQY--DGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFD 1164
Query: 412 LIYCFRYPSNFYCVV-DMSC--C-------MSLYS-WSADSRLLLSGSKDSTLKVWDIRT 460
++ + V D+ C SL S +L+SG+ DST+KVWDI T
Sbjct: 1165 GLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQNILVSGNADSTVKVWDITT 1224
Query: 461 QKLKQDLPG---HADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+ Q L G H V + ++ V + D +KLW
Sbjct: 1225 GQCLQTLSGPNKHHSAVTCLQFN--SRFVVTSSDDGTVKLW 1263
Score = 210 (79.0 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 71/267 (26%), Positives = 120/267 (44%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
R VS S D ++W KC+ L GHT V + G+ +I +GS D T+KVW+ G
Sbjct: 1007 RIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSGN-IIISGSTDRTLKVWDMDSG 1065
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPE----EMKKAALERYNKIKGN 327
+ L+GH V + L + +G+ D T + + + + L ++ +
Sbjct: 1066 ACVHTLQGHTSTVRCMHLHGSKVV-SGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYD 1124
Query: 328 APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
+ +VSG+ D+ + +W P + T + GH V + F DG V S S D SI++W
Sbjct: 1125 G-KLIVSGAYDYMVKIWHPERQECLHT-LQGHTNRVYSLQF--DGLHVVSGSLDTSIRVW 1180
Query: 388 NGTTGKFVAVFRGHVGPV--YQIRFELIYCFRYPSNF--YCVVDMSCCMSLYS----WSA 439
+ TG GH ++R ++ S + + C +L SA
Sbjct: 1181 DVETGNCKHTLMGHQSLTSGMELRQNILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSA 1240
Query: 440 ------DSRLLLSGSKDSTLKVWDIRT 460
+SR +++ S D T+K+WD++T
Sbjct: 1241 VTCLQFNSRFVVTSSDDGTVKLWDVKT 1267
Score = 161 (61.7 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 62/251 (24%), Positives = 111/251 (44%)
Query: 266 WETTQGKLIRELKGHG-HWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY--- 321
W + + + LKGH H + L S + +G+ D+T K +S+ L +
Sbjct: 979 WRSRPVRKPKVLKGHDDHVITCLQFSGNRIV-SGSDDNTLKVWSAVNGKCLRTLVGHTGG 1037
Query: 322 ---NKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASA 378
+++ GN ++SGS D T+ +W+ T + GH V ++ G V S
Sbjct: 1038 VWSSQMSGNI---IISGSTDRTLKVWDMDSGACVHT-LQGHTSTVRCMHLH--GSKVVSG 1091
Query: 379 SFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE--LIY--CFRYPSNFYCVVDMSCCMSL 434
S D ++++W+ G + V GH+ V ++++ LI + Y + C +L
Sbjct: 1092 SRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQECLHTL 1151
Query: 435 -------YSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 487
YS D ++SGS D++++VWD+ T K L GH ++ + +
Sbjct: 1152 QGHTNRVYSLQFDGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQN--ILV 1209
Query: 488 SGGKDRVLKLW 498
SG D +K+W
Sbjct: 1210 SGNADSTVKVW 1220
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 284 (105.0 bits), Expect = 3.6e-22, Sum P(2) = 3.6e-22
Identities = 79/248 (31%), Positives = 120/248 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I+GH V +A P + +GS D T+++WDL + TGH + V + S
Sbjct: 199 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 258
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S + +++CWD + K + GH + G+ P ++ V+ S+D AR
Sbjct: 259 YLFSCGEDKQVKCWDLEYNKVIRH-YHGHLSAVYGLDLHPT-IDV----LVTCSRDSTAR 312
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
IWDV + V LSGHT AV V+ + I TGS D TI++W+ GK L H
Sbjct: 313 IWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKK 372
Query: 283 WVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----NAPERLVSGSD 337
V ++ L Y +G+ D+ KQ+ P+ L +N I N+ LVSG+D
Sbjct: 373 SVRAVVLHPRHYTFASGSPDNI-KQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGAD 431
Query: 338 DFTMFLWE 345
+ TM LW+
Sbjct: 432 NGTMHLWD 439
Score = 189 (71.6 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 55/209 (26%), Positives = 92/209 (44%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH AV + P L + S D+T R+WD+ T+ + +GH N V + A +
Sbjct: 285 GHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQI 344
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
++GS ++ WD GK L+ HKK + + P H F S S D + + W
Sbjct: 345 ITGSHDTTIRLWDLVAGKTRVT-LTNHKKSVRAVVLHPRHYT-----FASGSPD-NIKQW 397
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVN 285
+ LSGH + + DGV+ +G+ + T+ +W+ G + + H V
Sbjct: 398 KFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQRV--HAA-VQ 454
Query: 286 SLALSTEYALRTGAFDHTGKQYSSPEEMK 314
+L +E + AFD + + + E K
Sbjct: 455 PGSLDSESGIFACAFDQSESRLLTAEADK 483
Score = 187 (70.9 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 62/220 (28%), Positives = 101/220 (45%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ I+ EP + + FV+ S D +IWD++ K + L+GH V V
Sbjct: 199 ISGHLGWVRCIAVEPGN-----QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 253
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ +D +K W+ K+IR GH V L L T L T + D T +
Sbjct: 254 STRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 313
Query: 307 YSSPEEMKKAALERYNK----IKGNAPE-RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ + L + ++ A E ++++GS D T+ LW+ V+ + + +T H++
Sbjct: 314 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWD-LVAGKTRVTLTNHKK 372
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
V V P AS S D +IK W G F+ GH
Sbjct: 373 SVRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLSGH 411
Score = 169 (64.5 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 55/202 (27%), Positives = 89/202 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH V V S L S D V+ WDL + GH + V +
Sbjct: 240 SLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTI 299
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
LV+ S+ + WD +T K S + LSGH + + + P + ++ S D
Sbjct: 300 DVLVTCSRDSTARIWDVRT-KASVHTLSGHTNAVATVRCQAAE---P--QIITGSHDTTI 353
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHG 281
R+WD+ K + L+ H +V V + +GS D IK W+ G I+ L GH
Sbjct: 354 RLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLSGHN 412
Query: 282 HWVNSLALSTEYALRTGAFDHT 303
+N+L ++++ L +GA + T
Sbjct: 413 AIINTLTVNSDGVLVSGADNGT 434
Score = 153 (58.9 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 50/183 (27%), Positives = 81/183 (44%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
V+GS D T+ +W+ A K K +TGH V V S ++ S DK +K W+
Sbjct: 219 VTGSADRTIKIWDLASGKL-KLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYN 277
Query: 393 KFVAVFRGHVGPVYQIRFE-----LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRL---- 443
K + + GH+ VY + L+ C R + + D+ S+++ S +
Sbjct: 278 KVIRHYHGHLSAVYGLDLHPTIDVLVTCSR--DSTARIWDVRTKASVHTLSGHTNAVATV 335
Query: 444 --------LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
+++GS D+T+++WD+ K + L H V AV P ASG D +
Sbjct: 336 RCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNI- 394
Query: 496 KLW 498
K W
Sbjct: 395 KQW 397
Score = 141 (54.7 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 38/158 (24%), Positives = 70/158 (44%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV----GPVYQIRFE 411
++GH V + P QW + S D++IK+W+ +GK GH+ G + R
Sbjct: 199 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 258
Query: 412 LIYCFRYPSNFYCV-VDMSCCMSLYS------WSADSR----LLLSGSKDSTLKVWDIRT 460
++ C ++ + + Y + D +L++ S+DST ++WD+RT
Sbjct: 259 YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRT 318
Query: 461 QKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+ L GH + V V ++ +G D ++LW
Sbjct: 319 KASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLW 356
Score = 123 (48.4 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 39/124 (31%), Positives = 55/124 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GHT AV +V Q+ +GS DTT+RLWDL T HK V +
Sbjct: 324 TLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRH 383
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
SGS ++ W G N LSGH I ++ +N+ VS + +G
Sbjct: 384 YTFASGSP-DNIKQWKFPDGSFIQN-LSGHNAIINTLT-----VNSD-GVLVSGADNGTM 435
Query: 223 RIWD 226
+WD
Sbjct: 436 HLWD 439
Score = 38 (18.4 bits), Expect = 3.6e-22, Sum P(2) = 3.6e-22
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 42 VNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKVSVE 79
V+ L+ K + +++D+ VPL K K++++
Sbjct: 10 VHTLVFRSLKRTHDMFVADNGKPVPLDEESHKRKMAIK 47
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 284 (105.0 bits), Expect = 3.6e-22, Sum P(2) = 3.6e-22
Identities = 81/248 (32%), Positives = 120/248 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I+GH V +A P + +GS D T+++WDL + TGH + V + S
Sbjct: 199 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 258
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S + +++CWD + K + GH + G+ P L+ V+ S+D AR
Sbjct: 259 YLFSCGEDKQVKCWDLEYNKVIRH-YHGHLSAVYGLDLHPT-LDV----LVTCSRDSTAR 312
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
IWDV + V LSGHT AV V+ + I TGS D TI++W+ GK L H
Sbjct: 313 IWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKK 372
Query: 283 WVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----NAPERLVSGSD 337
V ++ L Y +G+ D+ KQ+ P+ L +N I NA LVSG+D
Sbjct: 373 SVRAVVLHPLLYTFASGSPDNI-KQWKFPDGGFIQNLSGHNAIINTLAVNADGVLVSGAD 431
Query: 338 DFTMFLWE 345
+ TM LW+
Sbjct: 432 NGTMHLWD 439
Score = 181 (68.8 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 62/220 (28%), Positives = 101/220 (45%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ I+ EP + + FV+ S D +IWD++ K + L+GH V V
Sbjct: 199 ISGHLGWVRCIAVEPGN-----QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 253
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ +D +K W+ K+IR GH V L L T L T + D T +
Sbjct: 254 STRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARI 313
Query: 307 YSSPEEMKKAALERYNK----IKGNAPE-RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ + L + ++ A E ++++GS D T+ LW+ V+ + + +T H++
Sbjct: 314 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWD-LVAGKTRVTLTNHKK 372
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
V V P AS S D +IK W G F+ GH
Sbjct: 373 SVRAVVLHPLLYTFASGSPD-NIKQWKFPDGGFIQNLSGH 411
Score = 181 (68.8 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 55/215 (25%), Positives = 94/215 (43%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH AV + P L + S D+T R+WD+ T+ + +GH N V + A +
Sbjct: 285 GHLSAVYGLDLHPTLDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQI 344
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
++GS ++ WD GK L+ HKK + + P+ F S S D + + W
Sbjct: 345 ITGSHDTTIRLWDLVAGKTRVT-LTNHKKSVRAVVLHPLLYT-----FASGSPD-NIKQW 397
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVN 285
+ LSGH + + DGV+ +G+ + T+ +W+ G + + H V
Sbjct: 398 KFPDGGFIQNLSGHNAIINTLAVNADGVLVSGADNGTMHLWDWRTGYNFQRV--HAA-VQ 454
Query: 286 SLALSTEYALRTGAFDHTGKQYSSPEEMKKAALER 320
+L +E + AFD + + + E K + R
Sbjct: 455 PGSLDSESGIFACAFDRSESRLLTAEADKTIKVYR 489
Score = 173 (66.0 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 58/204 (28%), Positives = 91/204 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH V V S L S D V+ WDL + GH + V +
Sbjct: 240 SLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTL 299
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
LV+ S+ + WD +T K S + LSGH + + + P + ++ S D
Sbjct: 300 DVLVTCSRDSTARIWDVRT-KASVHTLSGHTNAVATVRCQAAE---P--QIITGSHDTTI 353
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYT---GSQDCTIKVWETTQGKLIRELKG 279
R+WD+ K + L+ H +V V ++YT GS D IK W+ G I+ L G
Sbjct: 354 RLWDLVAGKTRVTLTNHKKSVRAVVL--HPLLYTFASGSPD-NIKQWKFPDGGFIQNLSG 410
Query: 280 HGHWVNSLALSTEYALRTGAFDHT 303
H +N+LA++ + L +GA + T
Sbjct: 411 HNAIINTLAVNADGVLVSGADNGT 434
Score = 149 (57.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 50/183 (27%), Positives = 81/183 (44%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
V+GS D T+ +W+ A K K +TGH V V S ++ S DK +K W+
Sbjct: 219 VTGSADRTIKIWDLASGKL-KLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYN 277
Query: 393 KFVAVFRGHVGPVYQIRFE-----LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRL---- 443
K + + GH+ VY + L+ C R + + D+ S+++ S +
Sbjct: 278 KVIRHYHGHLSAVYGLDLHPTLDVLVTCSR--DSTARIWDVRTKASVHTLSGHTNAVATV 335
Query: 444 --------LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
+++GS D+T+++WD+ K + L H V AV P ASG D +
Sbjct: 336 RCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLLYTFASGSPDNI- 394
Query: 496 KLW 498
K W
Sbjct: 395 KQW 397
Score = 141 (54.7 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 38/158 (24%), Positives = 70/158 (44%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV----GPVYQIRFE 411
++GH V + P QW + S D++IK+W+ +GK GH+ G + R
Sbjct: 199 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 258
Query: 412 LIYCFRYPSNFYCV-VDMSCCMSLYS------WSADSR----LLLSGSKDSTLKVWDIRT 460
++ C ++ + + Y + D +L++ S+DST ++WD+RT
Sbjct: 259 YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDVRT 318
Query: 461 QKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+ L GH + V V ++ +G D ++LW
Sbjct: 319 KASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLW 356
Score = 38 (18.4 bits), Expect = 3.6e-22, Sum P(2) = 3.6e-22
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 42 VNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKVSVE 79
V+ L+ K + +++D+ VPL K K++++
Sbjct: 10 VHTLVFRSLKRTHDMFVADNGKPVPLDEESHKRKMAIK 47
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 284 (105.0 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 79/248 (31%), Positives = 120/248 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I+GH V +A P + +GS D T+++WDL + TGH + V + S
Sbjct: 200 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 259
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S + +++CWD + K + GH + G+ P ++ V+ S+D AR
Sbjct: 260 YLFSCGEDKQVKCWDLEYNKVIRH-YHGHLSAVYGLDLHPT-IDV----LVTCSRDSTAR 313
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
IWDV + V LSGHT AV V+ + I TGS D TI++W+ GK L H
Sbjct: 314 IWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKK 373
Query: 283 WVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----NAPERLVSGSD 337
V ++ L Y +G+ D+ KQ+ P+ L +N I N+ LVSG+D
Sbjct: 374 SVRAVVLHPRHYTFASGSPDNI-KQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGAD 432
Query: 338 DFTMFLWE 345
+ TM LW+
Sbjct: 433 NGTMHLWD 440
Score = 190 (71.9 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 56/215 (26%), Positives = 94/215 (43%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH AV + P L + S D+T R+WD+ T+ + +GH N V + A +
Sbjct: 286 GHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQI 345
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
++GS ++ WD GK L+ HKK + + P H F S S D + + W
Sbjct: 346 ITGSHDTTIRLWDLVAGKTRVT-LTNHKKSVRAVVLHPRHYT-----FASGSPD-NIKQW 398
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVN 285
+ LSGH + + DGV+ +G+ + T+ +W+ G + + H V
Sbjct: 399 KFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQRV--HAA-VQ 455
Query: 286 SLALSTEYALRTGAFDHTGKQYSSPEEMKKAALER 320
+L +E + AFD + + + E K + R
Sbjct: 456 PGSLDSESGIFACAFDQSESRLLTAEADKTIKVYR 490
Score = 187 (70.9 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 62/220 (28%), Positives = 101/220 (45%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ I+ EP + + FV+ S D +IWD++ K + L+GH V V
Sbjct: 200 ISGHLGWVRCIAVEPGN-----QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 254
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ +D +K W+ K+IR GH V L L T L T + D T +
Sbjct: 255 STRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 314
Query: 307 YSSPEEMKKAALERYNK----IKGNAPE-RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ + L + ++ A E ++++GS D T+ LW+ V+ + + +T H++
Sbjct: 315 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWD-LVAGKTRVTLTNHKK 373
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
V V P AS S D +IK W G F+ GH
Sbjct: 374 SVRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLSGH 412
Score = 169 (64.5 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 55/202 (27%), Positives = 89/202 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH V V S L S D V+ WDL + GH + V +
Sbjct: 241 SLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTI 300
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
LV+ S+ + WD +T K S + LSGH + + + P + ++ S D
Sbjct: 301 DVLVTCSRDSTARIWDVRT-KASVHTLSGHTNAVATVRCQAAE---P--QIITGSHDTTI 354
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHG 281
R+WD+ K + L+ H +V V + +GS D IK W+ G I+ L GH
Sbjct: 355 RLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLSGHN 413
Query: 282 HWVNSLALSTEYALRTGAFDHT 303
+N+L ++++ L +GA + T
Sbjct: 414 AIINTLTVNSDGVLVSGADNGT 435
Score = 153 (58.9 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 50/183 (27%), Positives = 81/183 (44%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
V+GS D T+ +W+ A K K +TGH V V S ++ S DK +K W+
Sbjct: 220 VTGSADRTIKIWDLASGKL-KLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYN 278
Query: 393 KFVAVFRGHVGPVYQIRFE-----LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRL---- 443
K + + GH+ VY + L+ C R + + D+ S+++ S +
Sbjct: 279 KVIRHYHGHLSAVYGLDLHPTIDVLVTCSR--DSTARIWDVRTKASVHTLSGHTNAVATV 336
Query: 444 --------LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
+++GS D+T+++WD+ K + L H V AV P ASG D +
Sbjct: 337 RCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNI- 395
Query: 496 KLW 498
K W
Sbjct: 396 KQW 398
Score = 141 (54.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 38/158 (24%), Positives = 70/158 (44%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV----GPVYQIRFE 411
++GH V + P QW + S D++IK+W+ +GK GH+ G + R
Sbjct: 200 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 259
Query: 412 LIYCFRYPSNFYCV-VDMSCCMSLYS------WSADSR----LLLSGSKDSTLKVWDIRT 460
++ C ++ + + Y + D +L++ S+DST ++WD+RT
Sbjct: 260 YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRT 319
Query: 461 QKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+ L GH + V V ++ +G D ++LW
Sbjct: 320 KASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLW 357
Score = 123 (48.4 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 39/124 (31%), Positives = 55/124 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GHT AV +V Q+ +GS DTT+RLWDL T HK V +
Sbjct: 325 TLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRH 384
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
SGS ++ W G N LSGH I ++ +N+ VS + +G
Sbjct: 385 YTFASGSP-DNIKQWKFPDGSFIQN-LSGHNAIINTLT-----VNSD-GVLVSGADNGTM 436
Query: 223 RIWD 226
+WD
Sbjct: 437 HLWD 440
Score = 38 (18.4 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 42 VNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKVSVE 79
V+ L+ K + +++D+ VPL K K++++
Sbjct: 10 VHTLVFRSLKRTHDMFVADNGKPVPLDEESHKRKMAIK 47
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 286 (105.7 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 76/252 (30%), Positives = 122/252 (48%)
Query: 104 IAGHTEAVLSVAFSPD-GRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H+ V S+ GR LA+G D V +W ++ + TGH + V CI +++
Sbjct: 16 IVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +V+GS +G L+ WD + K L GHK I+ + + P+ S S D +
Sbjct: 76 ERVVAGSLSGSLRLWDLEAAKIL-RTLMGHKASISSLDFHPMG-----EYLASGSVDSNI 129
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHG 281
++WDV + CV GHT AV C+ + DG + + S D T+K+W+ GK+I E H
Sbjct: 130 KLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHT 189
Query: 282 HWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA---PER--LVSG 335
VN + EY L +G+ D T K + + + E + + P+ L SG
Sbjct: 190 SAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSG 249
Query: 336 SDD-FTMFLWEP 346
S++ ++ WEP
Sbjct: 250 SENTLRVYGWEP 261
Score = 220 (82.5 bits), Expect = 8.5e-15, P = 8.5e-15
Identities = 61/204 (29%), Positives = 99/204 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH ++ S+ F P G LASGS D+ ++LWD+ + +F+ GH V C+A+S DG
Sbjct: 100 TLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDG 159
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L S S ++ WD GK + H + + + P S S D
Sbjct: 160 KWLASASDDSTVKLWDLIAGKMI-TEFTSHTSAVNVVQFHPNEY-----LLASGSADRTV 213
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKV--WETTQGKLIRELKG 279
++WD+ + G T V V + DG +Y+GS++ T++V WE + + + G
Sbjct: 214 KLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSEN-TLRVYGWEPDRCFDVVHV-G 271
Query: 280 HGHWVNSLALSTEYALRTGAFDHT 303
G V+ LA+S + ++ HT
Sbjct: 272 WGK-VSDLAISNNQMIAV-SYSHT 293
Score = 199 (75.1 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 52/209 (24%), Positives = 100/209 (47%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C ++ GHT AV + F+ ++ +GS ++RLWDL + GHK + + +
Sbjct: 55 CIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFH 114
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
G++L SGS ++ WD + K GH + + +++ P + SAS D
Sbjct: 115 PMGEYLASGSVDSNIKLWDVRR-KGCVFRYKGHTQAVRCLAFSP-----DGKWLASASDD 168
Query: 220 GDARIWDVSLRKCVICLSGHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQGKLIRELK 278
++WD+ K + + HT AV V++ + ++ +GS D T+K+W+ + +I +
Sbjct: 169 STVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSE 228
Query: 279 GHGHWVNSLALSTEYALRTGAFDHTGKQY 307
G V S+ + + + ++T + Y
Sbjct: 229 GETGVVRSVLFNPDGSCLYSGSENTLRVY 257
Score = 193 (73.0 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 65/257 (25%), Positives = 110/257 (42%)
Query: 233 VICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL-ST 291
++ S + ++ K G ++ TG +DC + +W ++ I L GH V + S+
Sbjct: 16 IVAHSSNVSSLVLGKSSGR-LLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSS 74
Query: 292 EYALRTGAFDHTGKQYS-SPEEMKKAALERYNKIKGNA--P--ERLVSGSDDFTMFLWEP 346
E + G+ + + + ++ + + I P E L SGS D + LW+
Sbjct: 75 EERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDV 134
Query: 347 AVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVY 406
K R GH Q V + FSPDG+W+ASAS D ++KLW+ GK + F H V
Sbjct: 135 R-RKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVN 193
Query: 407 QIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQD 466
++F +P N Y + S ++ W + ++ S+ T V +
Sbjct: 194 VVQF-------HP-NEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSC 245
Query: 467 LPGHADEVFAV-DWSPD 482
L ++ V W PD
Sbjct: 246 LYSGSENTLRVYGWEPD 262
Score = 173 (66.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 54/192 (28%), Positives = 86/192 (44%)
Query: 324 IKGNAPERLVS-GSDDFTMFLWEPAVSKQPKTR-MTGHQQLVNHVYFSPDGQWVASASFD 381
+ G + RL++ G +D + +W AVSK +TGH V + F+ + V + S
Sbjct: 27 VLGKSSGRLLATGGEDCRVNIW--AVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLS 84
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQIRF----ELIYCFRYPSNFYCV-VDMSCCMSLY- 435
S++LW+ K + GH + + F E + SN V C+ Y
Sbjct: 85 GSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYK 144
Query: 436 ---------SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKV 486
++S D + L S S DST+K+WD+ K+ + H V V + P+ +
Sbjct: 145 GHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLL 204
Query: 487 ASGGKDRVLKLW 498
ASG DR +KLW
Sbjct: 205 ASGSADRTVKLW 216
Score = 150 (57.9 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 41/113 (36%), Positives = 57/113 (50%)
Query: 66 PLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLAS 125
P+G YL V L V + VFR + GHT+AV +AFSPDG+ LAS
Sbjct: 115 PMGEYLASGSVDSNIKLWDVRRKGCVFRYK----------GHTQAVRCLAFSPDGKWLAS 164
Query: 126 GSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
S D+TV+LWDL + + T H + V + + + L SGS ++ WD
Sbjct: 165 ASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWD 217
Score = 147 (56.8 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 47/181 (25%), Positives = 88/181 (48%)
Query: 327 NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
++ ER+V+GS ++ LW+ +K +T M GH+ ++ + F P G+++AS S D +IKL
Sbjct: 73 SSEERVVAGSLSGSLRLWDLEAAKILRTLM-GHKASISSLDFHPMGEYLASGSVDSNIKL 131
Query: 387 WNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDM---------------SCC 431
W+ V ++GH V + F + ++ V + +
Sbjct: 132 WDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSA 191
Query: 432 MSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGK 491
+++ + + LL SGS D T+K+WD+ + G V +V ++PDG + SG +
Sbjct: 192 VNVVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYSGSE 251
Query: 492 D 492
+
Sbjct: 252 N 252
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 284 (105.0 bits), Expect = 3.8e-22, Sum P(2) = 3.8e-22
Identities = 79/248 (31%), Positives = 120/248 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I+GH V +A P + +GS D T+++WDL + TGH + V + S
Sbjct: 201 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 260
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S + +++CWD + K + GH + G+ P ++ V+ S+D AR
Sbjct: 261 YLFSCGEDKQVKCWDLEYNKVIRH-YHGHLSAVYGLDLHPT-IDV----LVTCSRDSTAR 314
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
IWDV + V LSGHT AV V+ + I TGS D TI++W+ GK L H
Sbjct: 315 IWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKK 374
Query: 283 WVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----NAPERLVSGSD 337
V ++ L Y +G+ D+ KQ+ P+ L +N I N+ LVSG+D
Sbjct: 375 SVRAVVLHPRHYTFASGSPDNI-KQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGAD 433
Query: 338 DFTMFLWE 345
+ TM LW+
Sbjct: 434 NGTMHLWD 441
Score = 189 (71.6 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 55/209 (26%), Positives = 92/209 (44%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH AV + P L + S D+T R+WD+ T+ + +GH N V + A +
Sbjct: 287 GHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQI 346
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
++GS ++ WD GK L+ HKK + + P H F S S D + + W
Sbjct: 347 ITGSHDTTIRLWDLVAGKTRVT-LTNHKKSVRAVVLHPRHYT-----FASGSPD-NIKQW 399
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVN 285
+ LSGH + + DGV+ +G+ + T+ +W+ G + + H V
Sbjct: 400 KFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGADNGTMHLWDWRTGYNFQRV--HAA-VQ 456
Query: 286 SLALSTEYALRTGAFDHTGKQYSSPEEMK 314
+L +E + AFD + + + E K
Sbjct: 457 PGSLDSESGIFACAFDQSESRLLTAEADK 485
Score = 187 (70.9 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 62/220 (28%), Positives = 101/220 (45%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ I+ EP + + FV+ S D +IWD++ K + L+GH V V
Sbjct: 201 ISGHLGWVRCIAVEPGN-----QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 255
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ +D +K W+ K+IR GH V L L T L T + D T +
Sbjct: 256 STRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 315
Query: 307 YSSPEEMKKAALERYNK----IKGNAPE-RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ + L + ++ A E ++++GS D T+ LW+ V+ + + +T H++
Sbjct: 316 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWD-LVAGKTRVTLTNHKK 374
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
V V P AS S D +IK W G F+ GH
Sbjct: 375 SVRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLSGH 413
Score = 169 (64.5 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 55/202 (27%), Positives = 89/202 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH V V S L S D V+ WDL + GH + V +
Sbjct: 242 SLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTI 301
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
LV+ S+ + WD +T K S + LSGH + + + P + ++ S D
Sbjct: 302 DVLVTCSRDSTARIWDVRT-KASVHTLSGHTNAVATVRCQAAE---P--QIITGSHDTTI 355
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHG 281
R+WD+ K + L+ H +V V + +GS D IK W+ G I+ L GH
Sbjct: 356 RLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQWKFPDGSFIQNLSGHN 414
Query: 282 HWVNSLALSTEYALRTGAFDHT 303
+N+L ++++ L +GA + T
Sbjct: 415 AIINTLTVNSDGVLVSGADNGT 436
Score = 153 (58.9 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 50/183 (27%), Positives = 81/183 (44%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
V+GS D T+ +W+ A K K +TGH V V S ++ S DK +K W+
Sbjct: 221 VTGSADRTIKIWDLASGKL-KLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYN 279
Query: 393 KFVAVFRGHVGPVYQIRFE-----LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRL---- 443
K + + GH+ VY + L+ C R + + D+ S+++ S +
Sbjct: 280 KVIRHYHGHLSAVYGLDLHPTIDVLVTCSR--DSTARIWDVRTKASVHTLSGHTNAVATV 337
Query: 444 --------LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
+++GS D+T+++WD+ K + L H V AV P ASG D +
Sbjct: 338 RCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNI- 396
Query: 496 KLW 498
K W
Sbjct: 397 KQW 399
Score = 151 (58.2 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 54/219 (24%), Positives = 90/219 (41%)
Query: 298 GAFDHTG-KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFL--WEPAVSKQPKT 354
G + H G S P M A +E GNA + TM W P K +
Sbjct: 147 GEYRHPGTSDRSQPAGMTSAVMEA-----GNAKNSALMAKKAPTMPKPQWHPPW-KLYRV 200
Query: 355 RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV----GPVYQIRF 410
++GH V + P QW + S D++IK+W+ +GK GH+ G + R
Sbjct: 201 -ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRS 259
Query: 411 ELIYCFRYPSNFYCV-VDMSCCMSLYS------WSADSR----LLLSGSKDSTLKVWDIR 459
++ C ++ + + Y + D +L++ S+DST ++WD+R
Sbjct: 260 PYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVR 319
Query: 460 TQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
T+ L GH + V V ++ +G D ++LW
Sbjct: 320 TKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLW 358
Score = 123 (48.4 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 39/124 (31%), Positives = 55/124 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GHT AV +V Q+ +GS DTT+RLWDL T HK V +
Sbjct: 326 TLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRH 385
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
SGS ++ W G N LSGH I ++ +N+ VS + +G
Sbjct: 386 YTFASGSP-DNIKQWKFPDGSFIQN-LSGHNAIINTLT-----VNSD-GVLVSGADNGTM 437
Query: 223 RIWD 226
+WD
Sbjct: 438 HLWD 441
Score = 38 (18.4 bits), Expect = 3.8e-22, Sum P(2) = 3.8e-22
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 42 VNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKVSVE 79
V+ L+ K + +++D+ VPL K K++++
Sbjct: 10 VHTLVFRSLKRTHDMFVADNGKPVPLDEESHKRKMAIK 47
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 277 (102.6 bits), Expect = 4.7e-22, P = 4.7e-22
Identities = 80/294 (27%), Positives = 140/294 (47%)
Query: 103 TIAGHTEAVLSVAFS-PDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
T+ GH V ++AF+ P G ++A+GS D T +LW T + GH ++C+A++
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQ 188
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ +GS + WD ++G+ L+GH I + + N R V+ S D
Sbjct: 189 STLVATGSMDTTAKLWDVESGEEVST-LAGHFAEIISLCF-----NTTGDRLVTGSFDHT 242
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGH 280
A +WDV + V LSGH ++CV++ D +I T S D + KVW+ G+ + L GH
Sbjct: 243 AILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGH 302
Query: 281 GHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALERY----NKIKGNAP-ERLVS 334
V + + T + T + D T + +S+ LE + +K+ NA R+++
Sbjct: 303 NDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLT 362
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
S D T +W + + GH + F+ +G + + S D + ++W+
Sbjct: 363 ASVDKTSRVWCVKTGACLQV-LEGHSDEIFSCAFNYEGDTIITGSKDNTCRIWH 415
Score = 252 (93.8 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 81/316 (25%), Positives = 142/316 (44%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD-G 162
+ H + +VAF+ G +GS D T ++WD + + GH+N V IA++ G
Sbjct: 88 LQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +GS + W +TGK GH I +++ P + S D A
Sbjct: 148 DKVATGSFDKTCKLWSAETGK-CFYTFRGHTAEIVCLAFNP-----QSTLVATGSMDTTA 201
Query: 223 RIWDVSLRKCVICLSGHTLAVT--CVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
++WDV + V L+GH + C GD ++ TGS D T +W+ G+ + L GH
Sbjct: 202 KLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLV-TGSFDHTAILWDVPSGRKVHVLSGH 260
Query: 281 GHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALERYNK----IKGNAPERLVS- 334
++ + + + +L T + D + K + + A L +N + N +L++
Sbjct: 261 RGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIAT 320
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF 394
S D T ++ Q ++ GH+ ++ V F+ G V +AS DK+ ++W TG
Sbjct: 321 ASADGTSRVFSTDTF-QCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGAC 379
Query: 395 VAVFRGHVGPVYQIRF 410
+ V GH ++ F
Sbjct: 380 LQVLEGHSDEIFSCAF 395
Score = 245 (91.3 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 68/254 (26%), Positives = 123/254 (48%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T GHT ++ +AF+P +A+GS DTT +LWD+ + + GH ++ + +
Sbjct: 168 KCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCF 227
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
+ G LV+GS WD +G+ + LSGH+ I+ + + N C +AS
Sbjct: 228 NTTGDRLVTGSFDHTAILWDVPSGRKV-HVLSGHRGEISCVQF-----NWDCSLIATASL 281
Query: 219 DGDARIWDVSLRKCVICLSGHTLAV--TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRE 276
D ++WD +C+ L GH V C + G +I T S D T +V+ T + + +
Sbjct: 282 DKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQ-LIATASADGTSRVFSTDTFQCLCQ 340
Query: 277 LKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYN-KIKGNA----PE 330
L+GH ++ + + + + + T + D T + + LE ++ +I A +
Sbjct: 341 LEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGD 400
Query: 331 RLVSGSDDFTMFLW 344
+++GS D T +W
Sbjct: 401 TIITGSKDNTCRIW 414
Score = 208 (78.3 bits), Expect = 5.8e-14, P = 5.8e-14
Identities = 54/184 (29%), Positives = 93/184 (50%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
+RLV+GS D T LW+ ++ ++GH+ ++ V F+ D +A+AS DKS K+W+
Sbjct: 232 DRLVTGSFDHTAILWDVPSGRKVHV-LSGHRGEISCVQFNWDCSLIATASLDKSCKVWDA 290
Query: 390 TTGKFVAVFRGHVGPVYQIRF----ELIYCFRYP--SNFYCVVDMSC-C--------MSL 434
G+ +A GH V + F +LI S + C C +S
Sbjct: 291 EGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISK 350
Query: 435 YSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
++A +L+ S D T +VW ++T Q L GH+DE+F+ ++ +G+ + +G KD
Sbjct: 351 VCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKDNT 410
Query: 495 LKLW 498
++W
Sbjct: 411 CRIW 414
Score = 169 (64.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 50/182 (27%), Positives = 88/182 (48%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFS-PDGQWVASASFDKSIKLWNGTT 391
++GS D T +W+ A ++ T + GH+ +V + F+ P G VA+ SFDK+ KLW+ T
Sbjct: 108 ITGSYDRTCKIWDTASGEELHT-LEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAET 166
Query: 392 GKFVAVFRGHVGPVYQIRFE----LIYC--FRYPSNFYCVV---DMSCCMSLYS------ 436
GK FRGH + + F L+ + + V ++S ++
Sbjct: 167 GKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLC 226
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
++ L++GS D T +WD+ + + L GH E+ V ++ D +A+ D+ K
Sbjct: 227 FNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCK 286
Query: 497 LW 498
+W
Sbjct: 287 VW 288
Score = 164 (62.8 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 48/173 (27%), Positives = 84/173 (48%)
Query: 96 PVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
P R ++GH + V F+ D +A+ S D + ++WD + GH + VL
Sbjct: 249 PSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLD 308
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ ++ G+ + + S G + + T + L GHK I+ + + NA R ++
Sbjct: 309 VCFNYTGQLIATASADGTSRVFSTDTFQCLCQ-LEGHKGEISKVCF-----NAQGSRVLT 362
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAV-TCV-KWGGDGVIYTGSQDCTIKVW 266
AS D +R+W V C+ L GH+ + +C + GD +I TGS+D T ++W
Sbjct: 363 ASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTII-TGSKDNTCRIW 414
Score = 140 (54.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 37/159 (23%), Positives = 73/159 (45%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIY- 414
+ H + +V F+ G + S+D++ K+W+ +G+ + GH VY I F Y
Sbjct: 88 LQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
Query: 415 -----------CFRYPSN----FYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIR 459
C + + FY + + +++ S L+ +GS D+T K+WD+
Sbjct: 148 DKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVE 207
Query: 460 TQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+ + L GH E+ ++ ++ G+++ +G D LW
Sbjct: 208 SGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILW 246
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 238 (88.8 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 81/272 (29%), Positives = 125/272 (45%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
LSGH VT V + VI + S+D TIKVW+ G R LKGH V ++ T
Sbjct: 104 LSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYN----KIKGNAPERLVSGSDDFTMFLWEPA 347
L + + D T K + E ++ +N I N + +VS S D T+ +WE A
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVA 222
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
KT TGH++ V V + DG +AS+S D+++++W T + A R H
Sbjct: 223 TGYCVKT-FTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHE----- 276
Query: 408 IRFELIYCFRY-PSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQD 466
++ C + P + + + + LLSGS+D T+K+WD+
Sbjct: 277 ---HVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMT 333
Query: 467 LPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L GH + V V P G+ + S D+ L++W
Sbjct: 334 LVGHDNWVRGVLVHPGGKYIVSCADDKTLRIW 365
Score = 233 (87.1 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 68/224 (30%), Positives = 105/224 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP--VH---LNA------ 208
DG + S S ++ W T K L H+ + ISW P H L A
Sbjct: 244 QDGTLIASSSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESAHPTILEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV--TCVKWGGDGVIYTGSQDCT 262
P +S S+D ++WDVS+ C++ L GH V V GG ++ + + D T
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIV-SCADDKT 361
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+++W+ + + L H H+V SL T + TG+ D T K
Sbjct: 362 LRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 232 (86.7 bits), Expect = 6.6e-22, Sum P(2) = 6.6e-22
Identities = 60/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ TG +GH++W+ + P N S+S D
Sbjct: 205 DHIVSASRDKTIKMWEVATGY-CVKTFTGHREWVRMV--RP---NQDGTLIASSSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSIGMCLMTLVGHDNWVRGV 344
Score = 203 (76.5 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 60/189 (31%), Positives = 85/189 (44%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T GH E V V + DG +AS S D TVR+W + T+ + H++ V CI+W+
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Query: 160 ADGKH--------------------LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ H L+SGS+ ++ WD G L GH W+ G+
Sbjct: 286 PESAHPTILEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMT-LVGHDNWVRGV 344
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGS 258
VH + VS + D RIWD ++C LS H VT + + + TGS
Sbjct: 345 L---VHPGG--KYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGS 399
Query: 259 QDCTIKVWE 267
D T+KVWE
Sbjct: 400 VDQTVKVWE 408
Score = 201 (75.8 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 61/204 (29%), Positives = 95/204 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+V+ CV +GH V V+ DG +I + S D T++VW + EL+ H H
Sbjct: 218 MWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTEYALRTGAFDHTGKQ 306
V ++ + E A T + TG +
Sbjct: 278 VVECISWAPESAHPT-ILEATGSE 300
Score = 179 (68.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 78/335 (23%), Positives = 140/335 (41%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HTG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L + + D T + + + KA L
Sbjct: 215 TIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF 380
+ E +V W P + TG + + P G ++ S S
Sbjct: 275 H--------EHVVE------CISWAPESAHPTILEATGSETKKSG---KP-GPFLLSGSR 316
Query: 381 DKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----LIYC--------FRYPSNFYCVVD 427
DK+IK+W+ + G + GH V + ++ C + Y N C
Sbjct: 317 DKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDY-KNKRCTKT 375
Query: 428 MSC---CMSLYSWSADSRLLLSGSKDSTLKVWDIR 459
+S ++ + + +++GS D T+KVW+ R
Sbjct: 376 LSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 165 (63.1 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 54/211 (25%), Positives = 96/211 (45%)
Query: 305 KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP-KTRMTGHQQLV 363
K+++S ++K +E +K+ A E + G + + + P K ++GH+ V
Sbjct: 53 KKWTSVIRLQKKVMELESKLN-EAKEEINIGGPIGQKRDPKEWIPRPPEKYALSGHRSPV 111
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----LIYCFRY 418
V F P + SAS D +IK+W+ TG F +GH V I F+ L C
Sbjct: 112 TRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSAD 171
Query: 419 PS-------NFYCVVDM---SCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP 468
+ F C+ M +S + + ++S S+D T+K+W++ T +
Sbjct: 172 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFT 231
Query: 469 GHADEVFAVDWSPDGEKVASGGKDRVLKLWM 499
GH + V V + DG +AS D+ +++W+
Sbjct: 232 GHREWVRMVRPNQDGTLIASSSNDQTVRVWV 262
Score = 89 (36.4 bits), Expect = 6.6e-22, Sum P(2) = 6.6e-22
Identities = 15/57 (26%), Positives = 32/57 (56%)
Query: 442 RLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+ ++S + D TL++WD + ++ + L H V ++D+ V +G D+ +K+W
Sbjct: 351 KYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 281 (104.0 bits), Expect = 8.6e-22, Sum P(2) = 8.6e-22
Identities = 79/248 (31%), Positives = 119/248 (47%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I+GH V +A P + +GS D T+++WDL + TGH + V + S
Sbjct: 200 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 259
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S + +++CWD + K + GH + G+ P ++ V+ S+D AR
Sbjct: 260 YLFSCGEDKQVKCWDLEYNKVIRH-YHGHLSAVYGLDLHPT-IDV----LVTCSRDSTAR 313
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
IWDV + V LSGHT AV V+ + I TGS D TI++W+ GK L H
Sbjct: 314 IWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKK 373
Query: 283 WVNSLALST-EYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----NAPERLVSGSD 337
V ++ L Y +G+ D+ KQ+ P+ L +N I N LVSG+D
Sbjct: 374 SVRAVVLHPLHYTFASGSPDNI-KQWKFPDGGFIQNLSGHNAIINTLAVNTDGVLVSGAD 432
Query: 338 DFTMFLWE 345
+ TM LW+
Sbjct: 433 NGTMHLWD 440
Score = 190 (71.9 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 56/215 (26%), Positives = 95/215 (44%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH AV + P L + S D+T R+WD+ T+ + +GH N V + A +
Sbjct: 286 GHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQI 345
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
++GS ++ WD GK L+ HKK + + P+H F S S D + + W
Sbjct: 346 ITGSHDTTIRLWDLVAGKTRVT-LTNHKKSVRAVVLHPLHYT-----FASGSPD-NIKQW 398
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVN 285
+ LSGH + + DGV+ +G+ + T+ +W+ G + + H V
Sbjct: 399 KFPDGGFIQNLSGHNAIINTLAVNTDGVLVSGADNGTMHLWDWRTGYNFQRV--HAA-VQ 455
Query: 286 SLALSTEYALRTGAFDHTGKQYSSPEEMKKAALER 320
+L +E + AFD + + + E K + R
Sbjct: 456 PGSLDSESGIFACAFDRSESRLLTAEADKTIKVYR 490
Score = 183 (69.5 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 62/220 (28%), Positives = 101/220 (45%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ I+ EP + + FV+ S D +IWD++ K + L+GH V V
Sbjct: 200 ISGHLGWVRCIAVEPGN-----QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIV 254
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ +D +K W+ K+IR GH V L L T L T + D T +
Sbjct: 255 STRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARI 314
Query: 307 YSSPEEMKKAALERYNK----IKGNAPE-RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ + L + ++ A E ++++GS D T+ LW+ V+ + + +T H++
Sbjct: 315 WDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWD-LVAGKTRVTLTNHKK 373
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
V V P AS S D +IK W G F+ GH
Sbjct: 374 SVRAVVLHPLHYTFASGSPD-NIKQWKFPDGGFIQNLSGH 412
Score = 173 (66.0 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 57/202 (28%), Positives = 90/202 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH V V S L S D V+ WDL + GH + V +
Sbjct: 241 SLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTI 300
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
LV+ S+ + WD +T K S + LSGH + + + P + ++ S D
Sbjct: 301 DVLVTCSRDSTARIWDVRT-KASVHTLSGHTNAVATVRCQAAE---P--QIITGSHDTTI 354
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHG 281
R+WD+ K + L+ H +V V + +GS D IK W+ G I+ L GH
Sbjct: 355 RLWDLVAGKTRVTLTNHKKSVRAVVLHPLHYTFASGSPD-NIKQWKFPDGGFIQNLSGHN 413
Query: 282 HWVNSLALSTEYALRTGAFDHT 303
+N+LA++T+ L +GA + T
Sbjct: 414 AIINTLAVNTDGVLVSGADNGT 435
Score = 151 (58.2 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 50/183 (27%), Positives = 81/183 (44%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
V+GS D T+ +W+ A K K +TGH V V S ++ S DK +K W+
Sbjct: 220 VTGSADRTIKIWDLASGKL-KLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYN 278
Query: 393 KFVAVFRGHVGPVYQIRFE-----LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRL---- 443
K + + GH+ VY + L+ C R + + D+ S+++ S +
Sbjct: 279 KVIRHYHGHLSAVYGLDLHPTIDVLVTCSR--DSTARIWDVRTKASVHTLSGHTNAVATV 336
Query: 444 --------LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
+++GS D+T+++WD+ K + L H V AV P ASG D +
Sbjct: 337 RCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPLHYTFASGSPDNI- 395
Query: 496 KLW 498
K W
Sbjct: 396 KQW 398
Score = 142 (55.0 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 50/215 (23%), Positives = 88/215 (40%)
Query: 300 FDHTG-KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTG 358
+ H G S P M +E N K +A + + W P K + ++G
Sbjct: 148 YRHPGASDRSQPTAMNSMIMETSNT-KNSA--LMAKKAPTMPKPQWHPPW-KLYRV-ISG 202
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV----GPVYQIRFELIY 414
H V + P QW + S D++IK+W+ +GK GH+ G + R ++
Sbjct: 203 HLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLF 262
Query: 415 CFRYPSNFYCV-VDMSCCMSLYS------WSADSR----LLLSGSKDSTLKVWDIRTQKL 463
C ++ + + Y + D +L++ S+DST ++WD+RT+
Sbjct: 263 SCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKAS 322
Query: 464 KQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L GH + V V ++ +G D ++LW
Sbjct: 323 VHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLW 357
Score = 38 (18.4 bits), Expect = 8.6e-22, Sum P(2) = 8.6e-22
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 42 VNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKVSVE 79
V+ L+ K + +++D+ VPL K K++++
Sbjct: 10 VHTLVFRSLKRTHDMFVADNGKPVPLDEESHKRKMAIK 47
Score = 37 (18.1 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 10/35 (28%), Positives = 12/35 (34%)
Query: 19 EGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLP 53
E P AP +P P Q V L+ P
Sbjct: 67 EKGPQNAPDSYPHKQYPANQGQDVEYLVTGTHPYP 101
>UNIPROTKB|Q5RCG7 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9601 "Pongo abelii" [GO:0009986 "cell surface"
evidence=ISS] [GO:0010595 "positive regulation of endothelial cell
migration" evidence=ISS] [GO:0014909 "smooth muscle cell migration"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 CTD:14 GeneTree:ENSGT00690000102167
HOVERGEN:HBG061307 OrthoDB:EOG4D26PX GO:GO:0001525 GO:GO:0010595
GO:GO:0014909 EMBL:CR858303 EMBL:CR859206 RefSeq:NP_001125288.1
UniGene:Pab.19266 ProteinModelPortal:Q5RCG7
Ensembl:ENSPPYT00000015307 GeneID:100172186 KEGG:pon:100172186
InParanoid:Q5RCG7 Uniprot:Q5RCG7
Length = 434
Score = 235 (87.8 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 89/349 (25%), Positives = 149/349 (42%)
Query: 85 VYQPQ--AVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLNTQT 141
V +PQ V + + T A H+ +V V+ P LA +G D +W L+
Sbjct: 66 VLEPQEGVVGSMEGPDDSEVTFALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGE 125
Query: 142 PMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
+F+C GHK+ V C +S D + +G +G L+ W T + + +G +W+ W
Sbjct: 126 LLFECAGHKDSVTCAGFSHDSTLVATGDMSGLLKVWQVDTKEEVWSFEAGDLEWM---EW 182
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQD 260
P AP ++ + DG+ +W V C G TC + DG G +D
Sbjct: 183 HP---RAPV--LLAGTADGNTWMWKVPNGDCKT-FQGPNCPATCGRVLPDGKRAVVGYED 236
Query: 261 CTIKVWETTQGKLIRELKG-HGHW--VNSLALSTEYAL-RTGAFDHTGKQYSS------- 309
TI++W+ QG I LKG GH + +A + + +L TG+ D K S+
Sbjct: 237 GTIRIWDLKQGSPIHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQAKLVSATTGKVVG 296
Query: 310 ---PEEM-KKAALERYNKIKGNAPERL---------VSGSDDFTMFLWEPAVSKQPKTRM 356
PE + + +L + + N+ E L G D T+ +++ A Q
Sbjct: 297 VFRPETVASQPSLGEGEESESNSVESLGFCSVMPLAAVGYLDGTLAIYDLAT--QTLRHQ 354
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
HQ + + + V + S D ++LW+ TG+ + +RGH +
Sbjct: 355 CQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLLTDYRGHTAEI 403
Score = 169 (64.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 55/204 (26%), Positives = 94/204 (46%)
Query: 118 PDGRQLASGSGDTTVRLWDLNTQTPM--FKCT-GHKNWVLCIAWSADGKHLVSGSKAGEL 174
PDG++ G D T+R+WDL +P+ K T GH+ + C+A + DG +++GS +
Sbjct: 225 PDGKRAVVGYEDGTIRIWDLKQGSPIHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQA 284
Query: 175 QCWDPQTGKPSG--NPLSGHKKWITGISWEPVHLNAPCRRFVSASK-------DGDARIW 225
+ TGK G P + + G E + F S DG I+
Sbjct: 285 KLVSATTGKVVGVFRPETVASQPSLGEGEESESNSVESLGFCSVMPLAAVGYLDGTLAIY 344
Query: 226 DVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
D++ + + H + + W G V+YT S D +++W+ G+L+ + +GH +
Sbjct: 345 DLATQT-LRHQCQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLLTDYRGHTAEI 403
Query: 285 NSLALSTEYALR-TGAFDHTGKQY 307
ALS + +L T + DH K +
Sbjct: 404 LDFALSKDASLVVTTSGDHKAKVF 427
Score = 138 (53.6 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 70/293 (23%), Positives = 113/293 (38%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
V+ +D A +W +S + + +GH +VTC + D ++ TG +KVW+ +
Sbjct: 108 VTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDSTLVATGDMSGLLKVWQVDTKE 167
Query: 273 LIRELK-GHGHWVNSLALSTEYALRTGAFDHTGKQYSSPE-EMKKAALERYNKIKGNA-P 329
+ + G W+ + L G D + P + K G P
Sbjct: 168 EVWSFEAGDLEWMEWHPRAP--VLLAGTADGNTWMWKVPNGDCKTFQGPNCPATCGRVLP 225
Query: 330 E--RLVSGSDDFTMFLWE-PAVSKQPKTRMT-GHQQLVNHVYFSPDGQWVASASFDKSIK 385
+ R V G +D T+ +W+ S + T GHQ + V + DG + + S D K
Sbjct: 226 DGKRAVVGYEDGTIRIWDLKQGSPIHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQAK 285
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLL 445
L + TTGK V VFR E S V + C + L
Sbjct: 286 LVSATTGKVVGVFRPETVASQPSLGE-----GEESESNSVESLGFCSVM-------PLAA 333
Query: 446 SGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
G D TL ++D+ TQ L+ H + + W V + D +++LW
Sbjct: 334 VGYLDGTLAIYDLATQTLRHQCQ-HQSGIVQLLWEAGTAVVYTCSLDGIVRLW 385
Score = 85 (35.0 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
W A + ++ + S D +++WD RT +L D GH E+ S D V + D K
Sbjct: 366 WEAGTAVVYTCSLDGIVRLWDARTGRLLTDYRGHTAEILDFALSKDASLVVTTSGDHKAK 425
Query: 497 LW 498
++
Sbjct: 426 VF 427
>UNIPROTKB|Q13685 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0014909 "smooth muscle cell
migration" evidence=IEP] [GO:0010595 "positive regulation of
endothelial cell migration" evidence=ISS] [GO:0009986 "cell
surface" evidence=IDA] [GO:0001525 "angiogenesis" evidence=NAS]
[GO:0008201 "heparin binding" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005737
GO:GO:0009986 GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0008201
CTD:14 HOGENOM:HOG000261676 HOVERGEN:HBG061307 OrthoDB:EOG4D26PX
GO:GO:0001525 GO:GO:0010595 GO:GO:0014909 EMBL:M95627 EMBL:CR456755
EMBL:BC008809 EMBL:BC020244 EMBL:BC039866 IPI:IPI00014481
PIR:I39383 RefSeq:NP_001078.2 UniGene:Hs.83347
ProteinModelPortal:Q13685 SMR:Q13685 IntAct:Q13685
MINT:MINT-1418005 STRING:Q13685 PhosphoSite:Q13685 DMDM:62906874
PaxDb:Q13685 PRIDE:Q13685 Ensembl:ENST00000248450 GeneID:14
KEGG:hsa:14 UCSC:uc002vhk.3 GeneCards:GC02M219092 HGNC:HGNC:18
HPA:CAB017717 MIM:603488 neXtProt:NX_Q13685 PharmGKB:PA24365
InParanoid:Q13685 ChiTaRS:AAMP GenomeRNAi:14 NextBio:31
ArrayExpress:Q13685 Bgee:Q13685 CleanEx:HS_AAMP
Genevestigator:Q13685 GermOnline:ENSG00000127837 Uniprot:Q13685
Length = 434
Score = 235 (87.8 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 89/349 (25%), Positives = 149/349 (42%)
Query: 85 VYQPQ--AVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLNTQT 141
V +PQ V + + T A H+ +V V+ P LA +G D +W L+
Sbjct: 66 VLEPQEGVVGSMEGPDDSEVTFALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGE 125
Query: 142 PMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
+F+C GHK+ V C +S D + +G +G L+ W T + + +G +W+ W
Sbjct: 126 LLFECAGHKDSVTCAGFSHDSTLVATGDMSGLLKVWQVDTKEEVWSFEAGDLEWM---EW 182
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQD 260
P AP ++ + DG+ +W V C G TC + DG G +D
Sbjct: 183 HP---RAPV--LLAGTADGNTWMWKVPNGDCKT-FQGPNCPATCGRVLPDGKRAVVGYED 236
Query: 261 CTIKVWETTQGKLIRELKG-HGHW--VNSLALSTEYAL-RTGAFDHTGKQYSS------- 309
TI++W+ QG I LKG GH + +A + + +L TG+ D K S+
Sbjct: 237 GTIRIWDLKQGSPIHVLKGTEGHQGPLTCVAANQDGSLILTGSVDCQAKLVSATTGKVVG 296
Query: 310 ---PEEM-KKAALERYNKIKGNAPERL---------VSGSDDFTMFLWEPAVSKQPKTRM 356
PE + + +L + + N+ E L G D T+ +++ A Q
Sbjct: 297 VFRPETVASQPSLGEGEESESNSVESLGFCSVMPLAAVGYLDGTLAIYDLAT--QTLRHQ 354
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
HQ + + + V + S D ++LW+ TG+ + +RGH +
Sbjct: 355 CQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLLTDYRGHTAEI 403
Score = 168 (64.2 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 55/204 (26%), Positives = 94/204 (46%)
Query: 118 PDGRQLASGSGDTTVRLWDLNTQTPM--FKCT-GHKNWVLCIAWSADGKHLVSGSKAGEL 174
PDG++ G D T+R+WDL +P+ K T GH+ + C+A + DG +++GS +
Sbjct: 225 PDGKRAVVGYEDGTIRIWDLKQGSPIHVLKGTEGHQGPLTCVAANQDGSLILTGSVDCQA 284
Query: 175 QCWDPQTGKPSG--NPLSGHKKWITGISWEPVHLNAPCRRFVSASK-------DGDARIW 225
+ TGK G P + + G E + F S DG I+
Sbjct: 285 KLVSATTGKVVGVFRPETVASQPSLGEGEESESNSVESLGFCSVMPLAAVGYLDGTLAIY 344
Query: 226 DVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
D++ + + H + + W G V+YT S D +++W+ G+L+ + +GH +
Sbjct: 345 DLATQT-LRHQCQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLLTDYRGHTAEI 403
Query: 285 NSLALSTEYALR-TGAFDHTGKQY 307
ALS + +L T + DH K +
Sbjct: 404 LDFALSKDASLVVTTSGDHKAKVF 427
Score = 138 (53.6 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 70/293 (23%), Positives = 113/293 (38%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
V+ +D A +W +S + + +GH +VTC + D ++ TG +KVW+ +
Sbjct: 108 VTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDSTLVATGDMSGLLKVWQVDTKE 167
Query: 273 LIRELK-GHGHWVNSLALSTEYALRTGAFDHTGKQYSSPE-EMKKAALERYNKIKGNA-P 329
+ + G W+ + L G D + P + K G P
Sbjct: 168 EVWSFEAGDLEWMEWHPRAP--VLLAGTADGNTWMWKVPNGDCKTFQGPNCPATCGRVLP 225
Query: 330 E--RLVSGSDDFTMFLWE-PAVSKQPKTRMT-GHQQLVNHVYFSPDGQWVASASFDKSIK 385
+ R V G +D T+ +W+ S + T GHQ + V + DG + + S D K
Sbjct: 226 DGKRAVVGYEDGTIRIWDLKQGSPIHVLKGTEGHQGPLTCVAANQDGSLILTGSVDCQAK 285
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLL 445
L + TTGK V VFR E S V + C + L
Sbjct: 286 LVSATTGKVVGVFRPETVASQPSLGE-----GEESESNSVESLGFCSVM-------PLAA 333
Query: 446 SGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
G D TL ++D+ TQ L+ H + + W V + D +++LW
Sbjct: 334 VGYLDGTLAIYDLATQTLRHQCQ-HQSGIVQLLWEAGTAVVYTCSLDGIVRLW 385
Score = 85 (35.0 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
W A + ++ + S D +++WD RT +L D GH E+ S D V + D K
Sbjct: 366 WEAGTAVVYTCSLDGIVRLWDARTGRLLTDYRGHTAEILDFALSKDASLVVTTSGDHKAK 425
Query: 497 LW 498
++
Sbjct: 426 VF 427
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 271 (100.5 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 86/312 (27%), Positives = 145/312 (46%)
Query: 89 QAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTG 148
Q +FR + R GH+ + + F PDG Q+A+ S D+TV LW+LN +
Sbjct: 2 QGLFRDPALER---HFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFAS 58
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV-HLN 207
H V +AWS G + S ++ W+P+ SG ++ H K + + ++ HL
Sbjct: 59 HSAPVNGVAWSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVA-HSKAVRSVDFDSTGHL- 116
Query: 208 APCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVW 266
++AS D A+IW V+ R+ V + V K+ +G ++ T S D +++++
Sbjct: 117 -----MLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIY 171
Query: 267 ETTQGKLIR----------ELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKA 316
+ G+ +R +L H W N LA++ R FD +G Q + A
Sbjct: 172 DVDSGECVRTFTEERAAPRQLAWHP-WGNMLAVALG-CNRIKIFDVSGSQLLQLYVVHSA 229
Query: 317 ALERYNKIKGNAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ N + + L+SGSDD T+ + + + +P +TGH VN V FS DG
Sbjct: 230 PV---NDVAFHPSGHFLLSGSDDRTIRILD-LLEGRPIYTLTGHTDAVNAVAFSRDGDKF 285
Query: 376 ASASFDKSIKLW 387
A+ D+ + +W
Sbjct: 286 ATGGSDRQLLVW 297
Score = 170 (64.9 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 53/182 (29%), Positives = 87/182 (47%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+++ SDD + +W A +Q + V FSP+G+ VA+AS DKS+++++ +
Sbjct: 117 MLTASDDKSAKIWRVA-RRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDS 175
Query: 392 GKFVAVFRGHVGPVYQIRFEL---IYCFRYPSNFYCVVDMSCC--MSLY----------S 436
G+ V F Q+ + + N + D+S + LY +
Sbjct: 176 GECVRTFTEERAAPRQLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVA 235
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+ LLSGS D T+++ D+ + L GH D V AV +S DG+K A+GG DR L
Sbjct: 236 FHPSGHFLLSGSDDRTIRILDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLL 295
Query: 497 LW 498
+W
Sbjct: 296 VW 297
>CGD|CAL0000293 [details] [associations]
symbol:UTP13 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000293 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555
RefSeq:XP_720576.1 RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1
STRING:Q5AGB1 GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 180 (68.4 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 51/193 (26%), Positives = 91/193 (47%)
Query: 327 NAPERLVSGSDDFTMFLWE-P----AVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
N P+ LV+GS D T+ W+ P ++ K + H + +N + SP+ ++ A+AS+D
Sbjct: 440 NEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYD 499
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQIRF----ELIYCFRYPSNF--YCVVDMSCCMSLY 435
K K+W +G+ + V +GH ++ I F +LI + ++D SC +L
Sbjct: 500 KLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLE 559
Query: 436 S----------WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEK 485
++ + LLS D +K+WD + ++ + L H ++A+D DGE
Sbjct: 560 GHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQGEIIKSLDNHDQRIWAMDLKNDGEY 619
Query: 486 VASGGKDRVLKLW 498
+ D L W
Sbjct: 620 FTTADADGKLSFW 632
Score = 170 (64.9 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 76/310 (24%), Positives = 126/310 (40%)
Query: 104 IAGHTEAVLSVAF-SPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
IAG+ + + + P+ LA + +R+ D+ + GH + + + S DG
Sbjct: 334 IAGNQGIIADIKYVGPEFNLLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTDG 393
Query: 163 KHLVSGSKAGELQCW----DPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
K + + SK E + W + Q +P GH IT IS N P + V+ S
Sbjct: 394 KWIATASKDNEARLWRWNGELQDFEPFAR-FQGHAGAITAISLSKSQ-NEP-KFLVTGST 450
Query: 219 DGDARIWDV-SLRKCVICLS-----GHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQG 271
D + W + + ++ S H + + D T S D KVW+T G
Sbjct: 451 DLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTDSG 510
Query: 272 KLIRELKGH--GHW-VNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYN----KI 324
+ I LKGH G W +N + + TG+ D T K +S + K LE + ++
Sbjct: 511 ETIGVLKGHKRGLWDINFYKF--DKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRV 568
Query: 325 K---GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
K P+ L G+D LW+ + K+ + H Q + + DG++ +A D
Sbjct: 569 KFFNREHPQLLSCGADGLIK-LWDYKQGEIIKS-LDNHDQRIWAMDLKNDGEYFTTADAD 626
Query: 382 KSIKLWNGTT 391
+ W T
Sbjct: 627 GKLSFWTDNT 636
Score = 155 (59.6 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 46/172 (26%), Positives = 78/172 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I G E + ++ +PDG LA S +R++DLN + + K + V + +
Sbjct: 56 IPGDGEVITNLTITPDGSYLAMISQSQLLRIFDLNKGS-VIKNFKLPSPVYISSVDSTSS 114
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
G G + WD + G + + L GH I +++ LN+ R S G +
Sbjct: 115 LFAFGGSDGVITVWDIENGYVT-HSLKGHGTTICSLTFHG-ELNSQDWRLASGDTMGTVK 172
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLI 274
IWD+ R+C+ L H AV V + DG ++ +G +D + ++ T K I
Sbjct: 173 IWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTI 224
Score = 116 (45.9 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 41/145 (28%), Positives = 69/145 (47%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLW--NGTTGKF--VAVFRGHVGPVYQIRFELI 413
GH ++N V S DG+W+A+AS D +LW NG F A F+GH G + I L
Sbjct: 379 GHTDILNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAI--SLS 436
Query: 414 YCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADE 473
P F +V S +++ W + + +S +K + T++ H +
Sbjct: 437 KSQNEPK-F--LVTGSTDLTIKKWK------IPNTPNSIVKTSEY-TRR------AHDKD 480
Query: 474 VFAVDWSPDGEKVASGGKDRVLKLW 498
+ ++D SP+ E A+ D++ K+W
Sbjct: 481 INSIDVSPNDEYFATASYDKLGKVW 505
Score = 93 (37.8 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 39/192 (20%), Positives = 76/192 (39%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
G T A +S + +G L + + V + +L+T ++K G + + + DG +L
Sbjct: 19 GGTSASISTS---NGELLLATPLNEDVIITNLDTNEIIYKIPGDGEVITNLTITPDGSYL 75
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
S++ L+ +D G N +I+ + ++ F DG +W
Sbjct: 76 AMISQSQLLRIFDLNKGSVIKNFKLPSPVYISSV-------DSTSSLFAFGGSDGVITVW 128
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGG-----DGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
D+ L GH + + + G D + +G T+K+W+ + + I LK H
Sbjct: 129 DIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDH 188
Query: 281 GHWVNSLALSTE 292
V + +
Sbjct: 189 NTAVRGVGFDQD 200
Score = 81 (33.6 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 443 LLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
LL + L++ DI + GH D + AVD S DG+ +A+ KD +LW
Sbjct: 353 LLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTDGKWIATASKDNEARLW 408
Score = 80 (33.2 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 25/94 (26%), Positives = 41/94 (43%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDL-NTQT-PMFKCTGHKNWVLCI 156
RC T+ H AV V F DG SG D V +++ N +T F +
Sbjct: 180 RCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAGFV 239
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSG-NPL 189
+ D ++ +G L+ WD ++G+ G +P+
Sbjct: 240 SLIDDRQYFYTGGSENVLKIWDIKSGEMIGRSPI 273
Score = 54 (24.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 21/89 (23%), Positives = 45/89 (50%)
Query: 394 FVAVFRGHVGPVYQIR-FELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDST 452
F++ R +V +Y + F+ I F P N ++ + +SL D + +G ++
Sbjct: 204 FISGGRDNVVIIYNTKNFKTINTF--PINEQ--IEAAGFVSLID---DRQYFYTGGSENV 256
Query: 453 LKVWDIRTQKL--KQDLPGHA-DEVFAVD 478
LK+WDI++ ++ + +P +E+ +D
Sbjct: 257 LKIWDIKSGEMIGRSPIPLKTNEELLIID 285
>UNIPROTKB|Q5AGB1 [details] [associations]
symbol:CaO19.11744 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000293
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555 RefSeq:XP_720576.1
RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1 STRING:Q5AGB1
GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 180 (68.4 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 51/193 (26%), Positives = 91/193 (47%)
Query: 327 NAPERLVSGSDDFTMFLWE-P----AVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
N P+ LV+GS D T+ W+ P ++ K + H + +N + SP+ ++ A+AS+D
Sbjct: 440 NEPKFLVTGSTDLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYD 499
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQIRF----ELIYCFRYPSNF--YCVVDMSCCMSLY 435
K K+W +G+ + V +GH ++ I F +LI + ++D SC +L
Sbjct: 500 KLGKVWQTDSGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLE 559
Query: 436 S----------WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEK 485
++ + LLS D +K+WD + ++ + L H ++A+D DGE
Sbjct: 560 GHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYKQGEIIKSLDNHDQRIWAMDLKNDGEY 619
Query: 486 VASGGKDRVLKLW 498
+ D L W
Sbjct: 620 FTTADADGKLSFW 632
Score = 170 (64.9 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 76/310 (24%), Positives = 126/310 (40%)
Query: 104 IAGHTEAVLSVAF-SPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
IAG+ + + + P+ LA + +R+ D+ + GH + + + S DG
Sbjct: 334 IAGNQGIIADIKYVGPEFNLLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTDG 393
Query: 163 KHLVSGSKAGELQCW----DPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
K + + SK E + W + Q +P GH IT IS N P + V+ S
Sbjct: 394 KWIATASKDNEARLWRWNGELQDFEPFAR-FQGHAGAITAISLSKSQ-NEP-KFLVTGST 450
Query: 219 DGDARIWDV-SLRKCVICLS-----GHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQG 271
D + W + + ++ S H + + D T S D KVW+T G
Sbjct: 451 DLTIKKWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTDSG 510
Query: 272 KLIRELKGH--GHW-VNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYN----KI 324
+ I LKGH G W +N + + TG+ D T K +S + K LE + ++
Sbjct: 511 ETIGVLKGHKRGLWDINFYKF--DKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRV 568
Query: 325 K---GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
K P+ L G+D LW+ + K+ + H Q + + DG++ +A D
Sbjct: 569 KFFNREHPQLLSCGADGLIK-LWDYKQGEIIKS-LDNHDQRIWAMDLKNDGEYFTTADAD 626
Query: 382 KSIKLWNGTT 391
+ W T
Sbjct: 627 GKLSFWTDNT 636
Score = 155 (59.6 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 46/172 (26%), Positives = 78/172 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I G E + ++ +PDG LA S +R++DLN + + K + V + +
Sbjct: 56 IPGDGEVITNLTITPDGSYLAMISQSQLLRIFDLNKGS-VIKNFKLPSPVYISSVDSTSS 114
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
G G + WD + G + + L GH I +++ LN+ R S G +
Sbjct: 115 LFAFGGSDGVITVWDIENGYVT-HSLKGHGTTICSLTFHG-ELNSQDWRLASGDTMGTVK 172
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLI 274
IWD+ R+C+ L H AV V + DG ++ +G +D + ++ T K I
Sbjct: 173 IWDLVKRRCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTI 224
Score = 116 (45.9 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 41/145 (28%), Positives = 69/145 (47%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLW--NGTTGKF--VAVFRGHVGPVYQIRFELI 413
GH ++N V S DG+W+A+AS D +LW NG F A F+GH G + I L
Sbjct: 379 GHTDILNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAI--SLS 436
Query: 414 YCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADE 473
P F +V S +++ W + + +S +K + T++ H +
Sbjct: 437 KSQNEPK-F--LVTGSTDLTIKKWK------IPNTPNSIVKTSEY-TRR------AHDKD 480
Query: 474 VFAVDWSPDGEKVASGGKDRVLKLW 498
+ ++D SP+ E A+ D++ K+W
Sbjct: 481 INSIDVSPNDEYFATASYDKLGKVW 505
Score = 93 (37.8 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 39/192 (20%), Positives = 76/192 (39%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
G T A +S + +G L + + V + +L+T ++K G + + + DG +L
Sbjct: 19 GGTSASISTS---NGELLLATPLNEDVIITNLDTNEIIYKIPGDGEVITNLTITPDGSYL 75
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
S++ L+ +D G N +I+ + ++ F DG +W
Sbjct: 76 AMISQSQLLRIFDLNKGSVIKNFKLPSPVYISSV-------DSTSSLFAFGGSDGVITVW 128
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGG-----DGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
D+ L GH + + + G D + +G T+K+W+ + + I LK H
Sbjct: 129 DIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIHTLKDH 188
Query: 281 GHWVNSLALSTE 292
V + +
Sbjct: 189 NTAVRGVGFDQD 200
Score = 81 (33.6 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 443 LLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
LL + L++ DI + GH D + AVD S DG+ +A+ KD +LW
Sbjct: 353 LLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTDGKWIATASKDNEARLW 408
Score = 80 (33.2 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 25/94 (26%), Positives = 41/94 (43%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDL-NTQT-PMFKCTGHKNWVLCI 156
RC T+ H AV V F DG SG D V +++ N +T F +
Sbjct: 180 RCIHTLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFPINEQIEAAGFV 239
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSG-NPL 189
+ D ++ +G L+ WD ++G+ G +P+
Sbjct: 240 SLIDDRQYFYTGGSENVLKIWDIKSGEMIGRSPI 273
Score = 54 (24.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 21/89 (23%), Positives = 45/89 (50%)
Query: 394 FVAVFRGHVGPVYQIR-FELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDST 452
F++ R +V +Y + F+ I F P N ++ + +SL D + +G ++
Sbjct: 204 FISGGRDNVVIIYNTKNFKTINTF--PINEQ--IEAAGFVSLID---DRQYFYTGGSENV 256
Query: 453 LKVWDIRTQKL--KQDLPGHA-DEVFAVD 478
LK+WDI++ ++ + +P +E+ +D
Sbjct: 257 LKIWDIKSGEMIGRSPIPLKTNEELLIID 285
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 279 (103.3 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 83/305 (27%), Positives = 150/305 (49%)
Query: 99 RCSATIAGHTEAVLS-VAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
R + GH + V++ + F G ++ SGS D T+++W T + GH V
Sbjct: 293 RSPKVLKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV---- 346
Query: 158 WSADGKH--LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
WS+ + ++SGS L+ W+ +TG+ + L GH + +HL+ +R VS
Sbjct: 347 WSSQMRDNIIISGSTDRTLKVWNAETGECI-HTLYGHTSTV-----RCMHLHE--KRVVS 398
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIR 275
S+D R+WD+ +C+ L GH AV CV++ G V+ +G+ D +KVW+ +
Sbjct: 399 GSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLH 457
Query: 276 ELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPER---L 332
L+GH + V SL + + +G+ D + + + L + + + L
Sbjct: 458 TLQGHTNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNIL 516
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRM--TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGT 390
VSG+ D T+ +W+ + +T + HQ V + F+ + +V ++S D ++KLW+
Sbjct: 517 VSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLK 574
Query: 391 TGKFV 395
TG+F+
Sbjct: 575 TGEFI 579
Score = 254 (94.5 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 63/182 (34%), Positives = 98/182 (53%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C + GH AV V + DGR++ SG+ D V++WD T+T + GH N V + +
Sbjct: 414 QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF 471
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
DG H+VSGS ++ WD +TG + L+GH+ +G+ + L VS +
Sbjct: 472 --DGIHVVSGSLDTSIRVWDVETGNCI-HTLTGHQSLTSGMELKDNIL-------VSGNA 521
Query: 219 DGDARIWDVSLRKCVICLSG---HTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIR 275
D +IWD+ +C+ L G H AVTC+++ + VI T S D T+K+W+ G+ IR
Sbjct: 522 DSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVI-TSSDDGTVKLWDLKTGEFIR 580
Query: 276 EL 277
L
Sbjct: 581 NL 582
Score = 242 (90.2 bits), Expect = 9.6e-17, Sum P(2) = 9.6e-17
Identities = 79/281 (28%), Positives = 134/281 (47%)
Query: 236 LSGHT-LAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH--GHWVNSLALSTE 292
L GH +TC+++ G+ ++ +GS D T+KVW GK +R L GH G W + + +
Sbjct: 298 LKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR---D 353
Query: 293 YALRTGAFDHTGKQYSSPE-EMKKAALERYNKIKGNA--PERLVSGSDDFTMFLWEPAVS 349
+ +G+ D T K +++ E + ++ +R+VSGS D T+ +W+
Sbjct: 354 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETG 413
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
+ M GH V V + DG+ V S ++D +K+W+ T + +GH VY ++
Sbjct: 414 QCLHVLM-GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 470
Query: 410 FELIYC--------FRY--PSNFYCVVDMSCCMSLYS-WSADSRLLLSGSKDSTLKVWDI 458
F+ I+ R C+ ++ SL S +L+SG+ DST+K+WDI
Sbjct: 471 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 530
Query: 459 RTQKLKQDLPGHADEVFAVDWSPDGEK-VASGGKDRVLKLW 498
+T + Q L G + AV + V + D +KLW
Sbjct: 531 KTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLW 571
Score = 214 (80.4 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 75/276 (27%), Positives = 120/276 (43%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
R VS S D ++W KC+ L GHT V + D +I +GS D T+KVW G
Sbjct: 315 RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DNIIISGSTDRTLKVWNAETG 373
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE------MKKAALERYNKIK 325
+ I L GH V + L E + +G+ D T + + M A R +
Sbjct: 374 ECIHTLYGHTSTVRCMHLH-EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 432
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
G R+VSG+ DF + +W+P T + GH V + F DG V S S D SI+
Sbjct: 433 GR---RVVSGAYDFMVKVWDPETETCLHT-LQGHTNRVYSLQF--DGIHVVSGSLDTSIR 486
Query: 386 LWNGTTGKFVAVFRGHVGPV--YQIRFELIYCFRYPSN--FYCVVDMSCCMSLYSWSA-- 439
+W+ TG + GH +++ ++ S + + C +L S
Sbjct: 487 VWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQ 546
Query: 440 --------DSRLLLSGSKDSTLKVWDIRTQKLKQDL 467
+ +++ S D T+K+WD++T + ++L
Sbjct: 547 SAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNL 582
Score = 150 (57.9 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 59/248 (23%), Positives = 111/248 (44%)
Query: 266 WETTQGKLIRELKGHG-HWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKI 324
W + + + LKGH H + L + +G+ D+T K +S+ L +
Sbjct: 287 WRRGELRSPKVLKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGG 345
Query: 325 KGNAPER---LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
++ R ++SGS D T+ +W + T + GH V ++ + V S S D
Sbjct: 346 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHT-LYGHTSTVRCMHLHE--KRVVSGSRD 402
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQIRFE---LI---YCFRY----PSNFYCVVDMSCC 431
++++W+ TG+ + V GHV V ++++ ++ Y F P C+ +
Sbjct: 403 ATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH 462
Query: 432 MS-LYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 490
+ +YS D ++SGS D++++VWD+ T L GH ++ + + SG
Sbjct: 463 TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGN 520
Query: 491 KDRVLKLW 498
D +K+W
Sbjct: 521 ADSTVKIW 528
Score = 37 (18.1 bits), Expect = 9.6e-17, Sum P(2) = 9.6e-17
Identities = 5/15 (33%), Positives = 9/15 (60%)
Query: 234 ICLSGHTLAVTCVKW 248
+C+ L ++CV W
Sbjct: 3 VCVLSSVLVLSCVCW 17
>UNIPROTKB|Q7YR70 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9615 "Canis lupus familiaris" [GO:0014909 "smooth muscle
cell migration" evidence=ISS] [GO:0009986 "cell surface"
evidence=ISS] [GO:0010595 "positive regulation of endothelial cell
migration" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 CTD:14
GeneTree:ENSGT00690000102167 HOGENOM:HOG000261676
HOVERGEN:HBG061307 OMA:VWSFEVG OrthoDB:EOG4D26PX GO:GO:0001525
GO:GO:0010595 GO:GO:0014909 EMBL:AY197355 RefSeq:NP_001013872.1
UniGene:Cfa.8616 ProteinModelPortal:Q7YR70 STRING:Q7YR70
Ensembl:ENSCAFT00000023220 GeneID:478908 KEGG:cfa:478908
InParanoid:Q7YR70 NextBio:20854176 Uniprot:Q7YR70
Length = 435
Score = 232 (86.7 bits), Expect = 2.7e-21, Sum P(2) = 2.7e-21
Identities = 89/349 (25%), Positives = 149/349 (42%)
Query: 85 VYQPQ--AVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLNTQT 141
V +PQ V + + T A H+ +V V+ P LA +G D +W L+
Sbjct: 67 VLEPQEGVVGSMEGPDDSEVTFALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGE 126
Query: 142 PMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
+F+C GHK+ V C +S D + +G +G L+ W T + + +G +W+ W
Sbjct: 127 LLFECAGHKDSVTCAGFSHDSTLVATGDMSGLLKVWQVDTKEEVWSFEAGDLEWM---EW 183
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQD 260
P AP ++ + DG+ +W V C G TC + DG G +D
Sbjct: 184 HP---RAPV--LLAGTADGNTWMWKVPNGDCKT-FQGPNCPATCGRVLPDGKRAVVGYED 237
Query: 261 CTIKVWETTQGKLIRELKG-HGHW--VNSLALSTEYAL-RTGAFD--------HTGKQYS 308
TI++W+ QG I LKG GH + +A + + +L TG+ D TGK
Sbjct: 238 GTIRIWDLKQGSPIHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQAQLVSATTGKVVG 297
Query: 309 --SPEEM-KKAALERYNKIKGNAPERL---------VSGSDDFTMFLWEPAVSKQPKTRM 356
PE + + + + + N+ E L G D T+ +++ +S Q
Sbjct: 298 VFRPETVASQPNVGEGEESESNSVESLGFCSVMPLAAVGYLDGTLAIYD--LSTQTLRHQ 355
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
HQ + + + V + S D ++LW+ TG+ + +RGH +
Sbjct: 356 CQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLLTDYRGHTAEI 404
Score = 176 (67.0 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 57/204 (27%), Positives = 94/204 (46%)
Query: 118 PDGRQLASGSGDTTVRLWDLNTQTPM--FKCT-GHKNWVLCIAWSADGKHLVSGSKAGEL 174
PDG++ G D T+R+WDL +P+ K T GH+ + C+A + DG +++GS +
Sbjct: 226 PDGKRAVVGYEDGTIRIWDLKQGSPIHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQA 285
Query: 175 QCWDPQTGKPSG--NPLSGHKKWITGISWEPVHLNAPCRRFVSASK-------DGDARIW 225
Q TGK G P + + G E + F S DG I+
Sbjct: 286 QLVSATTGKVVGVFRPETVASQPNVGEGEESESNSVESLGFCSVMPLAAVGYLDGTLAIY 345
Query: 226 DVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
D+S + + H + + W G V+YT S D +++W+ G+L+ + +GH +
Sbjct: 346 DLSTQT-LRHQCQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLLTDYRGHTAEI 404
Query: 285 NSLALSTEYALR-TGAFDHTGKQY 307
ALS + +L T + DH K +
Sbjct: 405 LDFALSKDASLVVTTSGDHKAKVF 428
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 68/293 (23%), Positives = 114/293 (38%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
V+ +D A +W +S + + +GH +VTC + D ++ TG +KVW+ +
Sbjct: 109 VTGGEDDKAFVWRLSDGELLFECAGHKDSVTCAGFSHDSTLVATGDMSGLLKVWQVDTKE 168
Query: 273 LIRELK-GHGHWVNSLALSTEYALRTGAFDHTGKQYSSPE-EMKKAALERYNKIKGNA-P 329
+ + G W+ + L G D + P + K G P
Sbjct: 169 EVWSFEAGDLEWMEWHPRAP--VLLAGTADGNTWMWKVPNGDCKTFQGPNCPATCGRVLP 226
Query: 330 E--RLVSGSDDFTMFLWE-PAVSKQPKTRMT-GHQQLVNHVYFSPDGQWVASASFDKSIK 385
+ R V G +D T+ +W+ S + T GHQ + V + DG + + S D +
Sbjct: 227 DGKRAVVGYEDGTIRIWDLKQGSPIHVLKGTEGHQGPLTCVATNQDGSLILTGSVDCQAQ 286
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLL 445
L + TTGK V VFR + + S V + C + L
Sbjct: 287 LVSATTGKVVGVFRPET-----VASQPNVGEGEESESNSVESLGFCSVM-------PLAA 334
Query: 446 SGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
G D TL ++D+ TQ L+ H + + W V + D +++LW
Sbjct: 335 VGYLDGTLAIYDLSTQTLRHQCQ-HQSGIVQLLWEAGTAVVYTCSLDGIVRLW 386
Score = 85 (35.0 bits), Expect = 2.7e-21, Sum P(2) = 2.7e-21
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
W A + ++ + S D +++WD RT +L D GH E+ S D V + D K
Sbjct: 367 WEAGTAVVYTCSLDGIVRLWDARTGRLLTDYRGHTAEILDFALSKDASLVVTTSGDHKAK 426
Query: 497 LW 498
++
Sbjct: 427 VF 428
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 223 (83.6 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
Identities = 57/186 (30%), Positives = 87/186 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH+ + V S DG SGS D T+RLWDL + GH VL +A+SAD + +
Sbjct: 62 GHSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQI 121
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
VSGS+ ++ W+ GH W++ + + P H N P VS D ++W
Sbjct: 122 VSGSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSN-PI--IVSCGWDRTVKVW 178
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYT-GSQDCTIKVWETTQGKLIRELKGHGHWV 284
+++ K GH + V DG + T G +D +W+ GK + L+ H +
Sbjct: 179 NLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLE-HNDII 237
Query: 285 NSLALS 290
N+L S
Sbjct: 238 NALCFS 243
Score = 176 (67.0 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 83/328 (25%), Positives = 135/328 (41%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW------DVSLRKCVICLSGHTLA 242
L GH W+T I+ P + +SAS+D +W D + L GH+
Sbjct: 11 LIGHNGWVTQIATNPKDPDT----IISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHF 66
Query: 243 VTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAF 300
++ V DG +GS D T+++W+ GK R +GH V S+A S + + +G+
Sbjct: 67 ISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSR 126
Query: 301 DHTGKQYSSPEEMKKAALE----------RYNKIKGNAPERLVSGSDDFTMFLWEPAVSK 350
D T K +++ E K E R++ N P +VS D T+ +W A K
Sbjct: 127 DKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSN-PI-IVSCGWDRTVKVWNLANCK 184
Query: 351 QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
K GH +N V SPDG S D LW+ GK + H + +
Sbjct: 185 L-KNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLE-HNDIINAL-- 240
Query: 411 ELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGH 470
CF P+ ++ V S+ W L+ K V ++R + +
Sbjct: 241 ----CFS-PNRYWLCVAYG--PSIKIWD------LACKKT----VEELRPEVVSPTSKAD 283
Query: 471 ADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+ ++ WS DG+ + +G D +++W
Sbjct: 284 QPQCLSLAWSTDGQTLFAGYSDNTIRVW 311
Score = 144 (55.7 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 52/184 (28%), Positives = 80/184 (43%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C TI GHT+ V V FSP+ + S D TV++W+L GH ++
Sbjct: 139 CKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNT 198
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K + WD GK + L H I + + P N R ++
Sbjct: 199 VTVSPDGSLCTSGGKDSKALLWDLNDGK-NLYTLE-HNDIINALCFSP---N---RYWLC 250
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVT-------CVK--WGGDG-VIYTGSQDCTIKV 265
+ +IWD++ +K V L ++ T C+ W DG ++ G D TI+V
Sbjct: 251 VAYGPSIKIWDLACKKTVEELRPEVVSPTSKADQPQCLSLAWSTDGQTLFAGYSDNTIRV 310
Query: 266 WETT 269
W+ +
Sbjct: 311 WQVS 314
Score = 77 (32.2 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 427 DMSCCMSLYSWSADSRLLLSGSKDSTLKVWDI 458
D C+SL +WS D + L +G D+T++VW +
Sbjct: 283 DQPQCLSL-AWSTDGQTLFAGYSDNTIRVWQV 313
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 277 (102.6 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 82/300 (27%), Positives = 149/300 (49%)
Query: 104 IAGHTEAVLS-VAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
+ GH + V++ + F G ++ SGS D T+++W T + GH V WS+
Sbjct: 298 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 351
Query: 163 KH--LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+ ++SGS L+ W+ +TG+ + L GH + +HL+ +R VS S+D
Sbjct: 352 RDNIIISGSTDRTLKVWNAETGECI-HTLYGHTSTV-----RCMHLHE--KRVVSGSRDA 403
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
R+WD+ +C+ L GH AV CV++ G V+ +G+ D +KVW+ + L+GH
Sbjct: 404 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGH 462
Query: 281 GHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPER---LVSGSD 337
+ V SL + + +G+ D + + + L + + + LVSG+
Sbjct: 463 TNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNA 521
Query: 338 DFTMFLWEPAVSKQPKTRM--TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
D T+ +W+ + +T + HQ V + F+ + +V ++S D ++KLW+ TG+F+
Sbjct: 522 DSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFI 579
Score = 254 (94.5 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 63/182 (34%), Positives = 98/182 (53%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C + GH AV V + DGR++ SG+ D V++WD T+T + GH N V + +
Sbjct: 414 QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF 471
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
DG H+VSGS ++ WD +TG + L+GH+ +G+ + L VS +
Sbjct: 472 --DGIHVVSGSLDTSIRVWDVETGNCI-HTLTGHQSLTSGMELKDNIL-------VSGNA 521
Query: 219 DGDARIWDVSLRKCVICLSG---HTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIR 275
D +IWD+ +C+ L G H AVTC+++ + VI T S D T+K+W+ G+ IR
Sbjct: 522 DSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVI-TSSDDGTVKLWDLKTGEFIR 580
Query: 276 EL 277
L
Sbjct: 581 NL 582
Score = 242 (90.2 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 79/281 (28%), Positives = 134/281 (47%)
Query: 236 LSGHT-LAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH--GHWVNSLALSTE 292
L GH +TC+++ G+ ++ +GS D T+KVW GK +R L GH G W + + +
Sbjct: 298 LKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR---D 353
Query: 293 YALRTGAFDHTGKQYSSPE-EMKKAALERYNKIKGNA--PERLVSGSDDFTMFLWEPAVS 349
+ +G+ D T K +++ E + ++ +R+VSGS D T+ +W+
Sbjct: 354 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETG 413
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
+ M GH V V + DG+ V S ++D +K+W+ T + +GH VY ++
Sbjct: 414 QCLHVLM-GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 470
Query: 410 FELIYC--------FRY--PSNFYCVVDMSCCMSLYS-WSADSRLLLSGSKDSTLKVWDI 458
F+ I+ R C+ ++ SL S +L+SG+ DST+K+WDI
Sbjct: 471 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 530
Query: 459 RTQKLKQDLPGHADEVFAVDWSPDGEK-VASGGKDRVLKLW 498
+T + Q L G + AV + V + D +KLW
Sbjct: 531 KTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKLW 571
Score = 229 (85.7 bits), Expect = 7.2e-16, P = 7.2e-16
Identities = 71/253 (28%), Positives = 117/253 (46%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T+ GHT V S + + SGS D T+++W+ T + GH + V C+
Sbjct: 334 KCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM-- 389
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
K +VSGS+ L+ WD +TG+ + L GH + + ++ RR VS +
Sbjct: 390 HLHEKRVVSGSRDATLRVWDIETGQCL-HVLMGHVAAVRCVQYDG-------RRVVSGAY 441
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
D ++WD C+ L GHT V +++ G V+ +GS D +I+VW+ G I L
Sbjct: 442 DFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLT 500
Query: 279 GHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP------ERL 332
GH + + L + L +G D T K + L+ +K + +
Sbjct: 501 GHQSLTSGMELK-DNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFV 559
Query: 333 VSGSDDFTMFLWE 345
++ SDD T+ LW+
Sbjct: 560 ITSSDDGTVKLWD 572
Score = 214 (80.4 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 75/276 (27%), Positives = 120/276 (43%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
R VS S D ++W KC+ L GHT V + D +I +GS D T+KVW G
Sbjct: 315 RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DNIIISGSTDRTLKVWNAETG 373
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE------MKKAALERYNKIK 325
+ I L GH V + L E + +G+ D T + + M A R +
Sbjct: 374 ECIHTLYGHTSTVRCMHLH-EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 432
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
G R+VSG+ DF + +W+P T + GH V + F DG V S S D SI+
Sbjct: 433 GR---RVVSGAYDFMVKVWDPETETCLHT-LQGHTNRVYSLQF--DGIHVVSGSLDTSIR 486
Query: 386 LWNGTTGKFVAVFRGHVGPV--YQIRFELIYCFRYPSN--FYCVVDMSCCMSLYSWSA-- 439
+W+ TG + GH +++ ++ S + + C +L S
Sbjct: 487 VWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQ 546
Query: 440 --------DSRLLLSGSKDSTLKVWDIRTQKLKQDL 467
+ +++ S D T+K+WD++T + ++L
Sbjct: 547 SAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNL 582
Score = 153 (58.9 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 60/248 (24%), Positives = 111/248 (44%)
Query: 266 WETTQGKLIRELKGHG-HWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKI 324
W + K + LKGH H + L + +G+ D+T K +S+ L +
Sbjct: 287 WRRGELKSPKVLKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGG 345
Query: 325 KGNAPER---LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
++ R ++SGS D T+ +W + T + GH V ++ + V S S D
Sbjct: 346 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHT-LYGHTSTVRCMHLHE--KRVVSGSRD 402
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQIRFE---LI---YCFRY----PSNFYCVVDMSCC 431
++++W+ TG+ + V GHV V ++++ ++ Y F P C+ +
Sbjct: 403 ATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH 462
Query: 432 MS-LYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 490
+ +YS D ++SGS D++++VWD+ T L GH ++ + + SG
Sbjct: 463 TNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGN 520
Query: 491 KDRVLKLW 498
D +K+W
Sbjct: 521 ADSTVKIW 528
Score = 38 (18.4 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 5/15 (33%), Positives = 9/15 (60%)
Query: 234 ICLSGHTLAVTCVKW 248
+C+ L ++CV W
Sbjct: 3 VCVPSSVLVLSCVCW 17
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 276 (102.2 bits), Expect = 3.3e-21, P = 3.3e-21
Identities = 82/300 (27%), Positives = 148/300 (49%)
Query: 104 IAGHTEAVLS-VAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
+ GH + V++ + F G ++ SGS D T+++W T + GH V WS+
Sbjct: 256 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 309
Query: 163 KH--LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+ ++SGS L+ W+ +TG+ + L GH + +HL+ +R VS S+D
Sbjct: 310 RDNIIISGSTDRTLKVWNAETGECI-HTLYGHTSTV-----RCMHLHE--KRVVSGSRDA 361
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
R+WD+ +C+ L GH AV CV++ G V+ +G+ D +KVW+ + L+GH
Sbjct: 362 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGH 420
Query: 281 GHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPER---LVSGSD 337
+ V SL + + +G+ D + + + L + + + LVSG+
Sbjct: 421 TNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNA 479
Query: 338 DFTMFLWEPAVSKQPKTRM--TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
D T+ +W+ + +T HQ V + F+ + +V ++S D ++KLW+ TG+F+
Sbjct: 480 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFI 537
Score = 254 (94.5 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 63/182 (34%), Positives = 98/182 (53%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C + GH AV V + DGR++ SG+ D V++WD T+T + GH N V + +
Sbjct: 372 QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF 429
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
DG H+VSGS ++ WD +TG + L+GH+ +G+ + L VS +
Sbjct: 430 --DGIHVVSGSLDTSIRVWDVETGNCI-HTLTGHQSLTSGMELKDNIL-------VSGNA 479
Query: 219 DGDARIWDVSLRKCVICLSG---HTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIR 275
D +IWD+ +C+ L G H AVTC+++ + VI T S D T+K+W+ G+ IR
Sbjct: 480 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVI-TSSDDGTVKLWDLKTGEFIR 538
Query: 276 EL 277
L
Sbjct: 539 NL 540
Score = 241 (89.9 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 79/283 (27%), Positives = 136/283 (48%)
Query: 236 LSGHT-LAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH--GHWVNSLALSTE 292
L GH +TC+++ G+ ++ +GS D T+KVW GK +R L GH G W + + +
Sbjct: 256 LKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR---D 311
Query: 293 YALRTGAFDHTGKQYSSPE-EMKKAALERYNKIKGNA--PERLVSGSDDFTMFLWEPAVS 349
+ +G+ D T K +++ E + ++ +R+VSGS D T+ +W+
Sbjct: 312 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETG 371
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
+ M GH V V + DG+ V S ++D +K+W+ T + +GH VY ++
Sbjct: 372 QCLHVLM-GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 428
Query: 410 FELIYC--------FRY--PSNFYCVVDMSCCMSLYS-WSADSRLLLSGSKDSTLKVWDI 458
F+ I+ R C+ ++ SL S +L+SG+ DST+K+WDI
Sbjct: 429 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 488
Query: 459 RTQKLKQDLPG---HADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+T + Q L G H V + ++ + V + D +KLW
Sbjct: 489 KTGQCLQTLQGPNKHQSAVTCLQFNKNF--VITSSDDGTVKLW 529
Score = 234 (87.4 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 72/253 (28%), Positives = 117/253 (46%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T+ GHT V S + + SGS D T+++W+ T + GH + V C+
Sbjct: 292 KCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM-- 347
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
K +VSGS+ L+ WD +TG+ + L GH + + ++ RR VS +
Sbjct: 348 HLHEKRVVSGSRDATLRVWDIETGQCL-HVLMGHVAAVRCVQYDG-------RRVVSGAY 399
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
D ++WD C+ L GHT V +++ G V+ +GS D +I+VW+ G I L
Sbjct: 400 DFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLT 458
Query: 279 GHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP------ERL 332
GH + + L + L +G D T K + L+ NK + +
Sbjct: 459 GHQSLTSGMELK-DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFV 517
Query: 333 VSGSDDFTMFLWE 345
++ SDD T+ LW+
Sbjct: 518 ITSSDDGTVKLWD 530
Score = 214 (80.4 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 76/276 (27%), Positives = 121/276 (43%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
R VS S D ++W KC+ L GHT V + D +I +GS D T+KVW G
Sbjct: 273 RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DNIIISGSTDRTLKVWNAETG 331
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE------MKKAALERYNKIK 325
+ I L GH V + L E + +G+ D T + + M A R +
Sbjct: 332 ECIHTLYGHTSTVRCMHLH-EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 390
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
G R+VSG+ DF + +W+P T + GH V + F DG V S S D SI+
Sbjct: 391 GR---RVVSGAYDFMVKVWDPETETCLHT-LQGHTNRVYSLQF--DGIHVVSGSLDTSIR 444
Query: 386 LWNGTTGKFVAVFRGHVGPV--YQIRFELIYCFRYPSN--FYCVVDMSCCMSLYS----W 437
+W+ TG + GH +++ ++ S + + C +L
Sbjct: 445 VWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQ 504
Query: 438 SA------DSRLLLSGSKDSTLKVWDIRTQKLKQDL 467
SA + +++ S D T+K+WD++T + ++L
Sbjct: 505 SAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNL 540
Score = 177 (67.4 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 51/167 (30%), Positives = 79/167 (47%)
Query: 344 WEPAVSKQPKTRMTGHQQ-LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
W K PK + GH ++ + F G + S S D ++K+W+ TGK + GH
Sbjct: 245 WRRGELKSPKV-LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT 301
Query: 403 GPVY--QIRFELIYCFRYPSNF--YCVVDMSCCMSLYSWSADSRLL-------LSGSKDS 451
G V+ Q+R +I + C +LY ++ R + +SGS+D+
Sbjct: 302 GGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDA 361
Query: 452 TLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
TL+VWDI T + L GH V V + DG +V SG D ++K+W
Sbjct: 362 TLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVW 406
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 276 (102.2 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 82/300 (27%), Positives = 148/300 (49%)
Query: 104 IAGHTEAVLS-VAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
+ GH + V++ + F G ++ SGS D T+++W T + GH V WS+
Sbjct: 296 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 349
Query: 163 KH--LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+ ++SGS L+ W+ +TG+ + L GH + +HL+ +R VS S+D
Sbjct: 350 RDNIIISGSTDRTLKVWNAETGECI-HTLYGHTSTV-----RCMHLHE--KRVVSGSRDA 401
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
R+WD+ +C+ L GH AV CV++ G V+ +G+ D +KVW+ + L+GH
Sbjct: 402 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGH 460
Query: 281 GHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPER---LVSGSD 337
+ V SL + + +G+ D + + + L + + + LVSG+
Sbjct: 461 TNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNA 519
Query: 338 DFTMFLWEPAVSKQPKTRM--TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
D T+ +W+ + +T HQ V + F+ + +V ++S D ++KLW+ TG+F+
Sbjct: 520 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFI 577
Score = 254 (94.5 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 63/182 (34%), Positives = 98/182 (53%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C + GH AV V + DGR++ SG+ D V++WD T+T + GH N V + +
Sbjct: 412 QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF 469
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
DG H+VSGS ++ WD +TG + L+GH+ +G+ + L VS +
Sbjct: 470 --DGIHVVSGSLDTSIRVWDVETGNCI-HTLTGHQSLTSGMELKDNIL-------VSGNA 519
Query: 219 DGDARIWDVSLRKCVICLSG---HTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIR 275
D +IWD+ +C+ L G H AVTC+++ + VI T S D T+K+W+ G+ IR
Sbjct: 520 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVI-TSSDDGTVKLWDLKTGEFIR 578
Query: 276 EL 277
L
Sbjct: 579 NL 580
Score = 241 (89.9 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 79/283 (27%), Positives = 136/283 (48%)
Query: 236 LSGHT-LAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH--GHWVNSLALSTE 292
L GH +TC+++ G+ ++ +GS D T+KVW GK +R L GH G W + + +
Sbjct: 296 LKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR---D 351
Query: 293 YALRTGAFDHTGKQYSSPE-EMKKAALERYNKIKGNA--PERLVSGSDDFTMFLWEPAVS 349
+ +G+ D T K +++ E + ++ +R+VSGS D T+ +W+
Sbjct: 352 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETG 411
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
+ M GH V V + DG+ V S ++D +K+W+ T + +GH VY ++
Sbjct: 412 QCLHVLM-GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 468
Query: 410 FELIYC--------FRY--PSNFYCVVDMSCCMSLYS-WSADSRLLLSGSKDSTLKVWDI 458
F+ I+ R C+ ++ SL S +L+SG+ DST+K+WDI
Sbjct: 469 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 528
Query: 459 RTQKLKQDLPG---HADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+T + Q L G H V + ++ + V + D +KLW
Sbjct: 529 KTGQCLQTLQGPNKHQSAVTCLQFNKNF--VITSSDDGTVKLW 569
Score = 234 (87.4 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 72/253 (28%), Positives = 117/253 (46%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T+ GHT V S + + SGS D T+++W+ T + GH + V C+
Sbjct: 332 KCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM-- 387
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
K +VSGS+ L+ WD +TG+ + L GH + + ++ RR VS +
Sbjct: 388 HLHEKRVVSGSRDATLRVWDIETGQCL-HVLMGHVAAVRCVQYDG-------RRVVSGAY 439
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
D ++WD C+ L GHT V +++ G V+ +GS D +I+VW+ G I L
Sbjct: 440 DFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLT 498
Query: 279 GHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP------ERL 332
GH + + L + L +G D T K + L+ NK + +
Sbjct: 499 GHQSLTSGMELK-DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFV 557
Query: 333 VSGSDDFTMFLWE 345
++ SDD T+ LW+
Sbjct: 558 ITSSDDGTVKLWD 570
Score = 214 (80.4 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 76/276 (27%), Positives = 121/276 (43%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
R VS S D ++W KC+ L GHT V + D +I +GS D T+KVW G
Sbjct: 313 RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DNIIISGSTDRTLKVWNAETG 371
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE------MKKAALERYNKIK 325
+ I L GH V + L E + +G+ D T + + M A R +
Sbjct: 372 ECIHTLYGHTSTVRCMHLH-EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 430
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
G R+VSG+ DF + +W+P T + GH V + F DG V S S D SI+
Sbjct: 431 GR---RVVSGAYDFMVKVWDPETETCLHT-LQGHTNRVYSLQF--DGIHVVSGSLDTSIR 484
Query: 386 LWNGTTGKFVAVFRGHVGPV--YQIRFELIYCFRYPSN--FYCVVDMSCCMSLYS----W 437
+W+ TG + GH +++ ++ S + + C +L
Sbjct: 485 VWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQ 544
Query: 438 SA------DSRLLLSGSKDSTLKVWDIRTQKLKQDL 467
SA + +++ S D T+K+WD++T + ++L
Sbjct: 545 SAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNL 580
Score = 177 (67.4 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 51/167 (30%), Positives = 79/167 (47%)
Query: 344 WEPAVSKQPKTRMTGHQQ-LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
W K PK + GH ++ + F G + S S D ++K+W+ TGK + GH
Sbjct: 285 WRRGELKSPKV-LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT 341
Query: 403 GPVY--QIRFELIYCFRYPSNF--YCVVDMSCCMSLYSWSADSRLL-------LSGSKDS 451
G V+ Q+R +I + C +LY ++ R + +SGS+D+
Sbjct: 342 GGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDA 401
Query: 452 TLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
TL+VWDI T + L GH V V + DG +V SG D ++K+W
Sbjct: 402 TLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVW 446
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 254 (94.5 bits), Expect = 4.2e-21, P = 4.2e-21
Identities = 62/196 (31%), Positives = 98/196 (50%)
Query: 104 IAGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H V S+ GR LA+G D V LW +N + TGH + V + +
Sbjct: 20 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 79
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S+D +
Sbjct: 80 ELIVAGSQSGSIRVWDLEAAKIL-RTLMGHKANICSLDFHPYG------EFVASGSQDTN 132
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + CV GH+ AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 133 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 192
Query: 281 GHWVNSLALS-TEYAL 295
VN + EY L
Sbjct: 193 TGPVNVVEFHPNEYLL 208
Score = 204 (76.9 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 58/166 (34%), Positives = 79/166 (47%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + +W + I L GH V S+ L+T L A +G E
Sbjct: 39 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIV-AGSQSGSIRVWDLE 97
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P E + SGS D + LW+ K R GH Q V
Sbjct: 98 AAKI-LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVR 155
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+ FSPDG+W+ASA+ D ++KLW+ T GK ++ F GH GPV + F
Sbjct: 156 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 201
Score = 165 (63.1 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 34/101 (33%), Positives = 52/101 (51%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ F P G +ASGS DT ++LWD+ + +F+ GH V C+ +S DG
Sbjct: 104 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 163
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
K L S + ++ WD GK GH + + + P
Sbjct: 164 KWLASAADDHTVKLWDLTAGKMMSE-FPGHTGPVNVVEFHP 203
Score = 138 (53.6 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 37/149 (24%), Positives = 68/149 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C ++ GHT V SV + + +GS ++R+WDL + GHK + + +
Sbjct: 59 CIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFH 118
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
G+ + SGS+ ++ WD + K GH + + + + P + SA+ D
Sbjct: 119 PYGEFVASGSQDTNIKLWDIRR-KGCVFRYRGHSQAVRCLRFSP-----DGKWLASAADD 172
Query: 220 GDARIWDVSLRKCVICLSGHTLAVTCVKW 248
++WD++ K + GHT V V++
Sbjct: 173 HTVKLWDLTAGKMMSEFPGHTGPVNVVEF 201
Score = 135 (52.6 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 47/189 (24%), Positives = 81/189 (42%)
Query: 311 EEMKKAALERYNKIKGNAPERLVS-GSDDFTMFLWEPAVSKQPKTR-MTGHQQLVNHVYF 368
EE+ A + + G A RL++ G DD + LW +++K +TGH V V
Sbjct: 18 EEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLW--SINKPNCIMSLTGHTSPVESVRL 75
Query: 369 SPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF----ELIYCFRYPSNFY- 423
+ + + + S SI++W+ K + GH + + F E + +N
Sbjct: 76 NTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKL 135
Query: 424 -------CVVDM---SCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADE 473
CV S + +S D + L S + D T+K+WD+ K+ + PGH
Sbjct: 136 WDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGP 195
Query: 474 VFAVDWSPD 482
V V++ P+
Sbjct: 196 VNVVEFHPN 204
Score = 128 (50.1 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 22/56 (39%), Positives = 38/56 (67%)
Query: 443 LLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L+++GS+ +++VWD+ K+ + L GH + ++D+ P GE VASG +D +KLW
Sbjct: 81 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLW 136
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 277 (102.6 bits), Expect = 5.1e-21, P = 5.1e-21
Identities = 75/220 (34%), Positives = 112/220 (50%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH+ V S +FSPD + L SGS D TVRLW ++T T + GH + V +++S G
Sbjct: 520 TLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLG 579
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ + S + W P +GH + +S+ P N C F +S D
Sbjct: 580 HYFATASHDQTARLWSCDHIYPL-RIFAGHLNDVDCVSFHP---NG-CYVFTGSS-DKTC 633
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHG 281
R+WDVS V GHT V + DG + TGS+D I VW+ GK +++++GHG
Sbjct: 634 RMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHG 693
Query: 282 -HWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALE 319
+ + SL+ S E L +G DHT + + ++KKA E
Sbjct: 694 KNAIYSLSYSKEGNVLISGGADHTVRVW----DLKKATTE 729
Score = 189 (71.6 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 75/284 (26%), Positives = 126/284 (44%)
Query: 232 CVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS 290
C+ ++C+ + D + G QD IK+W + G L +N+
Sbjct: 458 CMYTFQNTNKDMSCLDFSDDCRIAAAGFQDSYIKIW-SLDGS---SLNNPNIALNNNDKD 513
Query: 291 TEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSK 350
+ +T H+G YS+ + NK L+SGS+D T+ LW +
Sbjct: 514 EDPTCKT-LVGHSGTVYST-------SFSPDNKY-------LLSGSEDKTVRLWSMD-TH 557
Query: 351 QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
GH V V FSP G + A+AS D++ +LW+ + +F GH+ V + F
Sbjct: 558 TALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSF 617
Query: 411 EL--IYCFRYPSNFYCVV-DMSC--CMSLY-SWSA---------DSRLLLSGSKDSTLKV 455
Y F S+ C + D+S + L+ +A D R L +GS+D + V
Sbjct: 618 HPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINV 677
Query: 456 WDIRTQKLKQDLPGHA-DEVFAVDWSPDGEKVASGGKDRVLKLW 498
WDI T K + + GH + ++++ +S +G + SGG D +++W
Sbjct: 678 WDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVW 721
Score = 125 (49.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 60/225 (26%), Positives = 95/225 (42%)
Query: 275 RELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGN---AP- 329
+ L GH V S + S + L +G+ D T + +S + + +N + +P
Sbjct: 519 KTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPL 578
Query: 330 -ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
+ S D T LW P GH V+ V F P+G +V + S DK+ ++W+
Sbjct: 579 GHYFATASHDQTARLWS-CDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWD 637
Query: 389 GTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSN-----FYCVVDMSCCMSL--------- 434
+TG V +F GH PV I + R+ S V D+ L
Sbjct: 638 VSTGDSVRLFLGHTAPVISIA--VCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKN 695
Query: 435 --YS--WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVF 475
YS +S + +L+SG D T++VWD++ K + DE F
Sbjct: 696 AIYSLSYSKEGNVLISGGADHTVRVWDLK--KATTEPSAEPDEPF 738
Score = 57 (25.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 27/122 (22%), Positives = 49/122 (40%)
Query: 29 FPQNAGPQQLSQIVNKLLNNEEKLPYAFYIS----DHELLVPLGSYLE-KHKVSVEKVLS 83
F N G +I +K+ +EEK + D L P L K +++ L
Sbjct: 375 FKDNTGDDDKDKIKDKIAKDEEKKESELKVDGEKKDSNLSSPARDILPLPPKTALDLKLE 434
Query: 84 I--VYQPQAVFRIRPVNR-----CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
I V + + ++ + C T + + + FS D R A+G D+ +++W
Sbjct: 435 IQKVKESRDAIKLDNLQLALPSVCMYTFQNTNKDMSCLDFSDDCRIAAAGFQDSYIKIWS 494
Query: 137 LN 138
L+
Sbjct: 495 LD 496
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 276 (102.2 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 82/300 (27%), Positives = 148/300 (49%)
Query: 104 IAGHTEAVLS-VAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
+ GH + V++ + F G ++ SGS D T+++W T + GH V WS+
Sbjct: 376 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 429
Query: 163 KH--LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+ ++SGS L+ W+ +TG+ + L GH + +HL+ +R VS S+D
Sbjct: 430 RDNIIISGSTDRTLKVWNAETGECI-HTLYGHTSTV-----RCMHLHE--KRVVSGSRDA 481
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
R+WD+ +C+ L GH AV CV++ G V+ +G+ D +KVW+ + L+GH
Sbjct: 482 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGH 540
Query: 281 GHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPER---LVSGSD 337
+ V SL + + +G+ D + + + L + + + LVSG+
Sbjct: 541 TNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNA 599
Query: 338 DFTMFLWEPAVSKQPKTRM--TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
D T+ +W+ + +T HQ V + F+ + +V ++S D ++KLW+ TG+F+
Sbjct: 600 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFI 657
Score = 254 (94.5 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 63/182 (34%), Positives = 98/182 (53%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C + GH AV V + DGR++ SG+ D V++WD T+T + GH N V + +
Sbjct: 492 QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF 549
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
DG H+VSGS ++ WD +TG + L+GH+ +G+ + L VS +
Sbjct: 550 --DGIHVVSGSLDTSIRVWDVETGNCI-HTLTGHQSLTSGMELKDNIL-------VSGNA 599
Query: 219 DGDARIWDVSLRKCVICLSG---HTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIR 275
D +IWD+ +C+ L G H AVTC+++ + VI T S D T+K+W+ G+ IR
Sbjct: 600 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVI-TSSDDGTVKLWDLKTGEFIR 658
Query: 276 EL 277
L
Sbjct: 659 NL 660
Score = 241 (89.9 bits), Expect = 4.2e-17, P = 4.2e-17
Identities = 79/283 (27%), Positives = 136/283 (48%)
Query: 236 LSGHT-LAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH--GHWVNSLALSTE 292
L GH +TC+++ G+ ++ +GS D T+KVW GK +R L GH G W + + +
Sbjct: 376 LKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR---D 431
Query: 293 YALRTGAFDHTGKQYSSPE-EMKKAALERYNKIKGNA--PERLVSGSDDFTMFLWEPAVS 349
+ +G+ D T K +++ E + ++ +R+VSGS D T+ +W+
Sbjct: 432 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETG 491
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
+ M GH V V + DG+ V S ++D +K+W+ T + +GH VY ++
Sbjct: 492 QCLHVLM-GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 548
Query: 410 FELIYC--------FRY--PSNFYCVVDMSCCMSLYS-WSADSRLLLSGSKDSTLKVWDI 458
F+ I+ R C+ ++ SL S +L+SG+ DST+K+WDI
Sbjct: 549 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 608
Query: 459 RTQKLKQDLPG---HADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+T + Q L G H V + ++ + V + D +KLW
Sbjct: 609 KTGQCLQTLQGPNKHQSAVTCLQFNKNF--VITSSDDGTVKLW 649
Score = 234 (87.4 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 72/253 (28%), Positives = 117/253 (46%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T+ GHT V S + + SGS D T+++W+ T + GH + V C+
Sbjct: 412 KCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM-- 467
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
K +VSGS+ L+ WD +TG+ + L GH + + ++ RR VS +
Sbjct: 468 HLHEKRVVSGSRDATLRVWDIETGQCL-HVLMGHVAAVRCVQYDG-------RRVVSGAY 519
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
D ++WD C+ L GHT V +++ G V+ +GS D +I+VW+ G I L
Sbjct: 520 DFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLT 578
Query: 279 GHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP------ERL 332
GH + + L + L +G D T K + L+ NK + +
Sbjct: 579 GHQSLTSGMELK-DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFV 637
Query: 333 VSGSDDFTMFLWE 345
++ SDD T+ LW+
Sbjct: 638 ITSSDDGTVKLWD 650
Score = 214 (80.4 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 76/276 (27%), Positives = 121/276 (43%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
R VS S D ++W KC+ L GHT V + D +I +GS D T+KVW G
Sbjct: 393 RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DNIIISGSTDRTLKVWNAETG 451
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE------MKKAALERYNKIK 325
+ I L GH V + L E + +G+ D T + + M A R +
Sbjct: 452 ECIHTLYGHTSTVRCMHLH-EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 510
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
G R+VSG+ DF + +W+P T + GH V + F DG V S S D SI+
Sbjct: 511 GR---RVVSGAYDFMVKVWDPETETCLHT-LQGHTNRVYSLQF--DGIHVVSGSLDTSIR 564
Query: 386 LWNGTTGKFVAVFRGHVGPV--YQIRFELIYCFRYPSN--FYCVVDMSCCMSLYS----W 437
+W+ TG + GH +++ ++ S + + C +L
Sbjct: 565 VWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQ 624
Query: 438 SA------DSRLLLSGSKDSTLKVWDIRTQKLKQDL 467
SA + +++ S D T+K+WD++T + ++L
Sbjct: 625 SAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNL 660
Score = 177 (67.4 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 51/167 (30%), Positives = 79/167 (47%)
Query: 344 WEPAVSKQPKTRMTGHQQ-LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
W K PK + GH ++ + F G + S S D ++K+W+ TGK + GH
Sbjct: 365 WRRGELKSPKV-LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT 421
Query: 403 GPVY--QIRFELIYCFRYPSNF--YCVVDMSCCMSLYSWSADSRLL-------LSGSKDS 451
G V+ Q+R +I + C +LY ++ R + +SGS+D+
Sbjct: 422 GGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDA 481
Query: 452 TLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
TL+VWDI T + L GH V V + DG +V SG D ++K+W
Sbjct: 482 TLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVW 526
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 276 (102.2 bits), Expect = 5.3e-21, P = 5.3e-21
Identities = 82/300 (27%), Positives = 148/300 (49%)
Query: 104 IAGHTEAVLS-VAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
+ GH + V++ + F G ++ SGS D T+++W T + GH V WS+
Sbjct: 381 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 434
Query: 163 KH--LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+ ++SGS L+ W+ +TG+ + L GH + +HL+ +R VS S+D
Sbjct: 435 RDNIIISGSTDRTLKVWNAETGECI-HTLYGHTSTV-----RCMHLHE--KRVVSGSRDA 486
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
R+WD+ +C+ L GH AV CV++ G V+ +G+ D +KVW+ + L+GH
Sbjct: 487 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGH 545
Query: 281 GHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPER---LVSGSD 337
+ V SL + + +G+ D + + + L + + + LVSG+
Sbjct: 546 TNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNA 604
Query: 338 DFTMFLWEPAVSKQPKTRM--TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
D T+ +W+ + +T HQ V + F+ + +V ++S D ++KLW+ TG+F+
Sbjct: 605 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLKTGEFI 662
Score = 254 (94.5 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 63/182 (34%), Positives = 98/182 (53%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C + GH AV V + DGR++ SG+ D V++WD T+T + GH N V + +
Sbjct: 497 QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF 554
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
DG H+VSGS ++ WD +TG + L+GH+ +G+ + L VS +
Sbjct: 555 --DGIHVVSGSLDTSIRVWDVETGNCI-HTLTGHQSLTSGMELKDNIL-------VSGNA 604
Query: 219 DGDARIWDVSLRKCVICLSG---HTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIR 275
D +IWD+ +C+ L G H AVTC+++ + VI T S D T+K+W+ G+ IR
Sbjct: 605 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVI-TSSDDGTVKLWDLKTGEFIR 663
Query: 276 EL 277
L
Sbjct: 664 NL 665
Score = 241 (89.9 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 79/283 (27%), Positives = 136/283 (48%)
Query: 236 LSGHT-LAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH--GHWVNSLALSTE 292
L GH +TC+++ G+ ++ +GS D T+KVW GK +R L GH G W + + +
Sbjct: 381 LKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR---D 436
Query: 293 YALRTGAFDHTGKQYSSPE-EMKKAALERYNKIKGNA--PERLVSGSDDFTMFLWEPAVS 349
+ +G+ D T K +++ E + ++ +R+VSGS D T+ +W+
Sbjct: 437 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETG 496
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
+ M GH V V + DG+ V S ++D +K+W+ T + +GH VY ++
Sbjct: 497 QCLHVLM-GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 553
Query: 410 FELIYC--------FRY--PSNFYCVVDMSCCMSLYS-WSADSRLLLSGSKDSTLKVWDI 458
F+ I+ R C+ ++ SL S +L+SG+ DST+K+WDI
Sbjct: 554 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 613
Query: 459 RTQKLKQDLPG---HADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+T + Q L G H V + ++ + V + D +KLW
Sbjct: 614 KTGQCLQTLQGPNKHQSAVTCLQFNKNF--VITSSDDGTVKLW 654
Score = 234 (87.4 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 72/253 (28%), Positives = 117/253 (46%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T+ GHT V S + + SGS D T+++W+ T + GH + V C+
Sbjct: 417 KCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM-- 472
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
K +VSGS+ L+ WD +TG+ + L GH + + ++ RR VS +
Sbjct: 473 HLHEKRVVSGSRDATLRVWDIETGQCL-HVLMGHVAAVRCVQYDG-------RRVVSGAY 524
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
D ++WD C+ L GHT V +++ G V+ +GS D +I+VW+ G I L
Sbjct: 525 DFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLT 583
Query: 279 GHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP------ERL 332
GH + + L + L +G D T K + L+ NK + +
Sbjct: 584 GHQSLTSGMELK-DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFV 642
Query: 333 VSGSDDFTMFLWE 345
++ SDD T+ LW+
Sbjct: 643 ITSSDDGTVKLWD 655
Score = 214 (80.4 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 76/276 (27%), Positives = 121/276 (43%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
R VS S D ++W KC+ L GHT V + D +I +GS D T+KVW G
Sbjct: 398 RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DNIIISGSTDRTLKVWNAETG 456
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE------MKKAALERYNKIK 325
+ I L GH V + L E + +G+ D T + + M A R +
Sbjct: 457 ECIHTLYGHTSTVRCMHLH-EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 515
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
G R+VSG+ DF + +W+P T + GH V + F DG V S S D SI+
Sbjct: 516 GR---RVVSGAYDFMVKVWDPETETCLHT-LQGHTNRVYSLQF--DGIHVVSGSLDTSIR 569
Query: 386 LWNGTTGKFVAVFRGHVGPV--YQIRFELIYCFRYPSN--FYCVVDMSCCMSLYS----W 437
+W+ TG + GH +++ ++ S + + C +L
Sbjct: 570 VWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQ 629
Query: 438 SA------DSRLLLSGSKDSTLKVWDIRTQKLKQDL 467
SA + +++ S D T+K+WD++T + ++L
Sbjct: 630 SAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNL 665
Score = 177 (67.4 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 51/167 (30%), Positives = 79/167 (47%)
Query: 344 WEPAVSKQPKTRMTGHQQ-LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
W K PK + GH ++ + F G + S S D ++K+W+ TGK + GH
Sbjct: 370 WRRGELKSPKV-LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT 426
Query: 403 GPVY--QIRFELIYCFRYPSNF--YCVVDMSCCMSLYSWSADSRLL-------LSGSKDS 451
G V+ Q+R +I + C +LY ++ R + +SGS+D+
Sbjct: 427 GGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDA 486
Query: 452 TLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
TL+VWDI T + L GH V V + DG +V SG D ++K+W
Sbjct: 487 TLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVW 531
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 271 (100.5 bits), Expect = 5.8e-21, Sum P(2) = 5.8e-21
Identities = 106/354 (29%), Positives = 165/354 (46%)
Query: 62 ELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGR 121
E + P+ S E + + + + Y P A R+ +N T+ H V V FS +G+
Sbjct: 271 EQIAPV-SDTEAARKTTSQSWYVTYNP-ACKRVFNINLVH-TLE-HPSVVCCVKFSNNGK 326
Query: 122 QLASGSGDTTVRLWDLNTQTPMFKCTGHKN--------WVLCIAWSADGKHLVSGSKAGE 173
LA+G ++D+ T +F T H+ +V IA+S DGK+LV+G++ +
Sbjct: 327 YLATGCNQAA-NVFDVQTGKKLF--TLHEESPDPSRDLYVRTIAFSPDGKYLVTGTEDRQ 383
Query: 174 LQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCV 233
++ WD T K SGH++ I + + H N R VS S D AR+WDV +C+
Sbjct: 384 IKLWDLSTQKVR-YVFSGHEQDIYSLDFS--H-NG--RFIVSGSGDRTARLWDVETGQCI 437
Query: 234 ICLSGHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE 292
+ L VT + D I GS D I+VW + G L+ L+GH V S+A S +
Sbjct: 438 LKLEIEN-GVTAIAISPNDQFIAVGSLDQIIRVWSVS-GTLVERLEGHKESVYSIAFSPD 495
Query: 293 YA-LRTGAFDHTGKQYS------------SPEEMKKAALERYNKIKGN---APERL--VS 334
+ L +G+ D T K + PE + KA + + +P+ +S
Sbjct: 496 SSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLS 555
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
GS D +M W+ + T GH+ V V FSPDG+ AS S D ++W+
Sbjct: 556 GSKDRSMQFWDLQTGQSYLT-CQGHKNSVISVCFSPDGRQFASGSGDLRARIWS 608
Score = 211 (79.3 bits), Expect = 6.7e-14, P = 6.7e-14
Identities = 80/297 (26%), Positives = 133/297 (44%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHT------LAVTCVKWGGDG-VIYTGSQDCTIK 264
++++ + A ++DV K + L + L V + + DG + TG++D IK
Sbjct: 326 KYLATGCNQAANVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFSPDGKYLVTGTEDRQIK 385
Query: 265 VWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNK 323
+W+ + K+ GH + SL S + +G+ D T + + LE N
Sbjct: 386 LWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENG 445
Query: 324 IKGNA--PERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
+ A P + +VS R+ GH++ V + FSPD + S S D
Sbjct: 446 VTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVERLEGHKESVYSIAFSPDSSILLSGSLD 505
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADS 441
K+IK+W + R VG + I+ E I Y + V+ ++ S DS
Sbjct: 506 KTIKVWE------LQATRS-VG-LSAIKPEGICKATYTGHTDFVLSVAV-------SPDS 550
Query: 442 RLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
R LSGSKD +++ WD++T + GH + V +V +SPDG + ASG D ++W
Sbjct: 551 RWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIW 607
Score = 206 (77.6 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 78/263 (29%), Positives = 129/263 (49%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
V ++AFSPDG+ L +G+ D ++LWDL+TQ + +GH+ + + +S +G+ +VSGS
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSG 422
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA-SKDGDARIWDVSL 229
+ WD +TG+ L + +T I+ P N +F++ S D R+W VS
Sbjct: 423 DRTARLWDVETGQCILK-LE-IENGVTAIAISP---ND---QFIAVGSLDQIIRVWSVS- 473
Query: 230 RKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWE--TTQGKLIRELK-------- 278
V L GH +V + + D ++ +GS D TIKVWE T+ + +K
Sbjct: 474 GTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKAT 533
Query: 279 --GHGHWVNSLALSTE--YALRTGAFDH--------TGKQYSSPEEMKKAALERYNKIKG 326
GH +V S+A+S + + L +G+ D TG+ Y + + K + + G
Sbjct: 534 YTGHTDFVLSVAVSPDSRWGL-SGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDG 592
Query: 327 NAPERLVSGSDDFTMFLW--EPA 347
+ SGS D +W +PA
Sbjct: 593 R---QFASGSGDLRARIWSIDPA 612
Score = 196 (74.1 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 49/144 (34%), Positives = 74/144 (51%)
Query: 41 IVNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRC 100
+V +L ++E + Y+ S ++ GS L+K + V ++ + + + I+P C
Sbjct: 476 LVERLEGHKESV-YSIAFSPDSSILLSGS-LDK-TIKVWELQAT--RSVGLSAIKPEGIC 530
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
AT GHT+ VLSVA SPD R SGS D +++ WDL T C GHKN V+ + +S
Sbjct: 531 KATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSP 590
Query: 161 DGKHLVSGSKAGELQCWDPQTGKP 184
DG+ SGS + W P
Sbjct: 591 DGRQFASGSGDLRARIWSIDPASP 614
Score = 46 (21.3 bits), Expect = 5.8e-21, Sum P(2) = 5.8e-21
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 437 WSADSRLLLSGSKDSTLKVWDI 458
+S D R SGS D ++W I
Sbjct: 588 FSPDGRQFASGSGDLRARIWSI 609
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 276 (102.2 bits), Expect = 6.0e-21, P = 6.0e-21
Identities = 83/301 (27%), Positives = 150/301 (49%)
Query: 104 IAGHTEAVLS-VAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
+ GH + V++ + F G ++ SGS D T+++W T + GH V WS+
Sbjct: 429 LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----WSSQM 482
Query: 163 KH--LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+ ++SGS L+ W+ +TG+ + L GH + +HL+ +R VS S+D
Sbjct: 483 RDNIIISGSTDRTLKVWNAETGECI-HTLYGHTSTV-----RCMHLHE--KRVVSGSRDA 534
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
R+WD+ +C+ L GH AV CV++ G V+ +G+ D +KVW+ + L+GH
Sbjct: 535 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCLHTLQGH 593
Query: 281 GHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPER---LVSGSD 337
+ V SL + + +G+ D + + + L + + + LVSG+
Sbjct: 594 TNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNA 652
Query: 338 DFTMFLWEPAVSKQPKTRMTG---HQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF 394
D T+ +W+ + +T + G HQ V + F+ + +V ++S D ++KLW+ TG+F
Sbjct: 653 DSTVKIWDIKTGQCLQT-LQGPHKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLRTGEF 709
Query: 395 V 395
+
Sbjct: 710 I 710
Score = 254 (94.5 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 63/182 (34%), Positives = 98/182 (53%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C + GH AV V + DGR++ SG+ D V++WD T+T + GH N V + +
Sbjct: 545 QCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF 602
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
DG H+VSGS ++ WD +TG + L+GH+ +G+ + L VS +
Sbjct: 603 --DGIHVVSGSLDTSIRVWDVETGNCI-HTLTGHQSLTSGMELKDNIL-------VSGNA 652
Query: 219 DGDARIWDVSLRKCVICLSG---HTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIR 275
D +IWD+ +C+ L G H AVTC+++ + VI T S D T+K+W+ G+ IR
Sbjct: 653 DSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNFVI-TSSDDGTVKLWDLRTGEFIR 711
Query: 276 EL 277
L
Sbjct: 712 NL 713
Score = 241 (89.9 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 79/283 (27%), Positives = 136/283 (48%)
Query: 236 LSGHT-LAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH--GHWVNSLALSTE 292
L GH +TC+++ G+ ++ +GS D T+KVW GK +R L GH G W + + +
Sbjct: 429 LKGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR---D 484
Query: 293 YALRTGAFDHTGKQYSSPE-EMKKAALERYNKIKGNA--PERLVSGSDDFTMFLWEPAVS 349
+ +G+ D T K +++ E + ++ +R+VSGS D T+ +W+
Sbjct: 485 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETG 544
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
+ M GH V V + DG+ V S ++D +K+W+ T + +GH VY ++
Sbjct: 545 QCLHVLM-GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 601
Query: 410 FELIYC--------FRY--PSNFYCVVDMSCCMSLYS-WSADSRLLLSGSKDSTLKVWDI 458
F+ I+ R C+ ++ SL S +L+SG+ DST+K+WDI
Sbjct: 602 FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDI 661
Query: 459 RTQKLKQDLPG---HADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+T + Q L G H V + ++ + V + D +KLW
Sbjct: 662 KTGQCLQTLQGPHKHQSAVTCLQFNKNF--VITSSDDGTVKLW 702
Score = 229 (85.7 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 71/253 (28%), Positives = 117/253 (46%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C T+ GHT V S + + SGS D T+++W+ T + GH + V C+
Sbjct: 465 KCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM-- 520
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
K +VSGS+ L+ WD +TG+ + L GH + + ++ RR VS +
Sbjct: 521 HLHEKRVVSGSRDATLRVWDIETGQCL-HVLMGHVAAVRCVQYDG-------RRVVSGAY 572
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
D ++WD C+ L GHT V +++ G V+ +GS D +I+VW+ G I L
Sbjct: 573 DFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVV-SGSLDTSIRVWDVETGNCIHTLT 631
Query: 279 GHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP------ERL 332
GH + + L + L +G D T K + L+ +K + +
Sbjct: 632 GHQSLTSGMELK-DNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQFNKNFV 690
Query: 333 VSGSDDFTMFLWE 345
++ SDD T+ LW+
Sbjct: 691 ITSSDDGTVKLWD 703
Score = 217 (81.4 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 77/276 (27%), Positives = 121/276 (43%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
R VS S D ++W KC+ L GHT V + D +I +GS D T+KVW G
Sbjct: 446 RIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR-DNIIISGSTDRTLKVWNAETG 504
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE------MKKAALERYNKIK 325
+ I L GH V + L E + +G+ D T + + M A R +
Sbjct: 505 ECIHTLYGHTSTVRCMHLH-EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD 563
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
G R+VSG+ DF + +W+P T + GH V + F DG V S S D SI+
Sbjct: 564 GR---RVVSGAYDFMVKVWDPETETCLHT-LQGHTNRVYSLQF--DGIHVVSGSLDTSIR 617
Query: 386 LWNGTTGKFVAVFRGHVGPV--YQIRFELIYCFRYPSN--FYCVVDMSCCMSLYS----W 437
+W+ TG + GH +++ ++ S + + C +L
Sbjct: 618 VWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQ 677
Query: 438 SA------DSRLLLSGSKDSTLKVWDIRTQKLKQDL 467
SA + +++ S D T+K+WD+RT + ++L
Sbjct: 678 SAVTCLQFNKNFVITSSDDGTVKLWDLRTGEFIRNL 713
Score = 176 (67.0 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 51/167 (30%), Positives = 79/167 (47%)
Query: 344 WEPAVSKQPKTRMTGHQQ-LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
W K PK + GH ++ + F G + S S D ++K+W+ TGK + GH
Sbjct: 418 WRRGDLKSPKV-LKGHDDHVITCLQFC--GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHT 474
Query: 403 GPVY--QIRFELIYCFRYPSNF--YCVVDMSCCMSLYSWSADSRLL-------LSGSKDS 451
G V+ Q+R +I + C +LY ++ R + +SGS+D+
Sbjct: 475 GGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDA 534
Query: 452 TLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
TL+VWDI T + L GH V V + DG +V SG D ++K+W
Sbjct: 535 TLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVW 579
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 272 (100.8 bits), Expect = 6.5e-21, P = 6.5e-21
Identities = 76/249 (30%), Positives = 120/249 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I+GH V S+A P + +GS D T+++WDL + TGH + V +A S
Sbjct: 204 ISGHLGWVRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVAVSNRSP 263
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S + +++CWD + K + GH + + P ++ V+ S+D AR
Sbjct: 264 YLFSCGEDKQVKCWDLEYNKVIRH-YHGHLSAVYDLDLHPT-IDV----LVTCSRDATAR 317
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGG--DGVIYTGSQDCTIKVWETTQGKLIRELKGHG 281
+WD+ + V LSGHT V VK V+ GS D TI++W+ GK L H
Sbjct: 318 VWDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLVAGKTRATLTNHK 377
Query: 282 HWVNSLALST-EYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----NAPERLVSGS 336
V +L L +Y +G+ D+ KQ+ P+ L +N I N+ LVSG+
Sbjct: 378 KSVRALVLHPRQYTFASGSPDNI-KQWKFPDGNFIQNLSGHNAIINTLAVNSDGVLVSGA 436
Query: 337 DDFTMFLWE 345
D+ T+ +W+
Sbjct: 437 DNGTIHMWD 445
Score = 186 (70.5 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 62/221 (28%), Positives = 96/221 (43%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ I+ EP + + FV+ S D +IWD++ K + L+GH V V
Sbjct: 204 ISGHLGWVRSIAVEPGN-----QWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVAV 258
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ +D +K W+ K+IR GH V L L T L T + D T +
Sbjct: 259 SNRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARV 318
Query: 307 YSSPEEMKKAALERYN------KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQ 360
+ + L + K + P+ + GS D T+ LW+ K T +T H+
Sbjct: 319 WDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLVAGKTRAT-LTNHK 377
Query: 361 QLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
+ V + P AS S D +IK W G F+ GH
Sbjct: 378 KSVRALVLHPRQYTFASGSPD-NIKQWKFPDGNFIQNLSGH 417
Score = 175 (66.7 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 55/210 (26%), Positives = 91/210 (43%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI-AWSADGKH 164
GH AV + P L + S D T R+WD+ T+ + +GH N V + SA+ +
Sbjct: 290 GHLSAVYDLDLHPTIDVLVTCSRDATARVWDIRTKANVHTLSGHTNTVATVKCQSAEPQV 349
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
+ GS ++ WD GK L+ HKK + + P F S S D + +
Sbjct: 350 VTVGSHDTTIRLWDLVAGKTRAT-LTNHKKSVRALVLHPRQYT-----FASGSPD-NIKQ 402
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
W + LSGH + + DGV+ +G+ + TI +W+ G + + H V
Sbjct: 403 WKFPDGNFIQNLSGHNAIINTLAVNSDGVLVSGADNGTIHMWDWRTGYNFQRI--HAA-V 459
Query: 285 NSLALSTEYALRTGAFDHTGKQYSSPEEMK 314
+L +E + + FD + + + E K
Sbjct: 460 QPGSLDSESGIFSCVFDQSESRLITAEADK 489
Score = 163 (62.4 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 56/202 (27%), Positives = 88/202 (43%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH V VA S L S D V+ WDL + GH + V +
Sbjct: 245 SLTGHISTVRGVAVSNRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTI 304
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
LV+ S+ + WD +T K + + LSGH + + + +A + S D
Sbjct: 305 DVLVTCSRDATARVWDIRT-KANVHTLSGHTNTVATVKCQ----SAEPQVVTVGSHDTTI 359
Query: 223 RIWDVSLRKCVICLSGHTLAVTC-VKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHG 281
R+WD+ K L+ H +V V +GS D IK W+ G I+ L GH
Sbjct: 360 RLWDLVAGKTRATLTNHKKSVRALVLHPRQYTFASGSPD-NIKQWKFPDGNFIQNLSGHN 418
Query: 282 HWVNSLALSTEYALRTGAFDHT 303
+N+LA++++ L +GA + T
Sbjct: 419 AIINTLAVNSDGVLVSGADNGT 440
Score = 155 (59.6 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 49/182 (26%), Positives = 81/182 (44%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
V+GS D T+ +W+ A K K +TGH V V S ++ S DK +K W+
Sbjct: 224 VTGSADRTIKIWDLASGKL-KLSLTGHISTVRGVAVSNRSPYLFSCGEDKQVKCWDLEYN 282
Query: 393 KFVAVFRGHVGPVYQIRFE-----LIYC----------FRYPSNFYCVVD-MSCCMSLYS 436
K + + GH+ VY + L+ C R +N + + + ++
Sbjct: 283 KVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARVWDIRTKANVHTLSGHTNTVATVKC 342
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
SA+ +++ GS D+T+++WD+ K + L H V A+ P ASG D + K
Sbjct: 343 QSAEPQVVTVGSHDTTIRLWDLVAGKTRATLTNHKKSVRALVLHPRQYTFASGSPDNI-K 401
Query: 497 LW 498
W
Sbjct: 402 QW 403
Score = 143 (55.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 46/163 (28%), Positives = 71/163 (43%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYC 415
++GH V + P QW + S D++IK+W+ +GK GH+ V +
Sbjct: 204 ISGHLGWVRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVAVSN--- 260
Query: 416 FRYPSNFYCVVDMSC-CMSL-YS-------------WSADSR----LLLSGSKDSTLKVW 456
R P F C D C L Y+ + D +L++ S+D+T +VW
Sbjct: 261 -RSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARVW 319
Query: 457 DIRTQKLKQDLPGHADEVFAVDW-SPDGEKVASGGKDRVLKLW 498
DIRT+ L GH + V V S + + V G D ++LW
Sbjct: 320 DIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLW 362
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 251 (93.4 bits), Expect = 8.9e-21, P = 8.9e-21
Identities = 80/269 (29%), Positives = 131/269 (48%)
Query: 49 EEKLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQ----AVFRIRPVNRCSA-- 102
++K P Y+ L+ G ++ VS E +I+ + V+++ P + S
Sbjct: 3 QQKAPQVTYLEVGSLVGHNG-FVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGK 61
Query: 103 ---TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLN--TQTPMFKCTGHKNWVLCIA 157
++ GH+ V V S DG+ SGS D T+RLWD+ T +FK GH V+ +A
Sbjct: 62 AHRSLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFK--GHTQDVMSVA 119
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSG---HKKWITGISWEPVHLNAPCRRFV 214
+S+D + ++SGS+ ++ W+ G+ L G H+ W++ I + P N P V
Sbjct: 120 FSSDNRQIISGSRDATIKVWNT-LGECKFT-LEGPEAHQDWVSCIRFSP---NTPT--IV 172
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKL 273
S S D +IWD+ KC L+ HT V V DG + +G +D +WE + GK
Sbjct: 173 SGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKP 232
Query: 274 IRELKGHGHWVNSLALS-TEYALRTGAFD 301
+ +L+ + +N+LA S +Y L D
Sbjct: 233 LYKLEAR-NTINALAFSPNKYWLSAATDD 260
Score = 202 (76.2 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 84/327 (25%), Positives = 146/327 (44%)
Query: 148 GHKNWVLCIAWSADGKH-LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW--EPV 204
GH +V IA S + ++S S+ + W T + +P H+ + G S + V
Sbjct: 19 GHNGFVTSIAVSPENPDTIISSSRDKTVMVWQ-LTPTDATSPGKAHRS-LKGHSHFVQDV 76
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
++ + +S S D R+WD++ GHT V V + D I +GS+D TI
Sbjct: 77 VISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATI 136
Query: 264 KVWETTQGKLIRELKG---HGHWVNSLALSTEY-ALRTGAFDHTGKQYSSPEEMKKAALE 319
KVW T G+ L+G H WV+ + S + +G++D+ K + L
Sbjct: 137 KVWNTL-GECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLT 195
Query: 320 RY----NKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQW 374
+ N + + L SG D LWE + K P ++ + +N + FSP+ W
Sbjct: 196 DHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGK-PLYKLEA-RNTINALAFSPNKYW 253
Query: 375 VASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSL 434
+++A+ DK I +W+ T + +A + P +++ + F C+SL
Sbjct: 254 LSAATDDKII-IWDLLTKQVLA----EIVP--EVKEQ---AFDSKKKKESKPKAPACLSL 303
Query: 435 YSWSADSRLLLSGSKDSTLKVWDIRTQ 461
+WSAD +L +G D ++V+ +Q
Sbjct: 304 -AWSADGSVLYAGYNDGLIRVYKSSSQ 329
Score = 192 (72.6 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 88/337 (26%), Positives = 149/337 (44%)
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDV------SLRKC 232
PQ L GH ++T I+ P + + +S+S+D +W + S K
Sbjct: 7 PQVTYLEVGSLVGHNGFVTSIAVSPENPDT----IISSSRDKTVMVWQLTPTDATSPGKA 62
Query: 233 VICLSGHTLAVTCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALST 291
L GH+ V V DG +GS D T+++W+ T+G R KGH V S+A S+
Sbjct: 63 HRSLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSS 122
Query: 292 EYA-LRTGAFDHTGKQYSSPEEMK------KAALERYNKIK--GNAPERLVSGSDDFTMF 342
+ + +G+ D T K +++ E K +A + + I+ N P +VSGS D +
Sbjct: 123 DNRQIISGSRDATIKVWNTLGECKFTLEGPEAHQDWVSCIRFSPNTPT-IVSGSWDNKVK 181
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
+W+ K T +T H VN V SPDG AS D LW ++GK
Sbjct: 182 IWDIKSFKCNHT-LTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGK--------- 231
Query: 403 GPVYQIRFE-LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQ 461
P+Y++ I + N Y + + + W ++ +L+ +K ++
Sbjct: 232 -PLYKLEARNTINALAFSPNKYWL-SAATDDKIIIWDLLTKQVLAEIVPE-VKEQAFDSK 288
Query: 462 KLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
K K+ P A ++ WS DG + +G D +++++
Sbjct: 289 KKKESKP-KAPACLSLAWSADGSVLYAGYNDGLIRVY 324
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 272 (100.8 bits), Expect = 9.2e-21, P = 9.2e-21
Identities = 87/306 (28%), Positives = 143/306 (46%)
Query: 104 IAGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H V S+ GR LA+G D V LW +N + TGH + V + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S+D +
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLMGHKANICSLDFHPYG------EFVASGSQDTN 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + CV GH+ AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 281 GHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALE------RY--NKIKGNAPER 331
VN + EY L +G+ D T + + + + +E RY + + G +P
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRYAGSWVVGLSPPP 248
Query: 332 LVSG---------SDDFTMFLWEPAVSKQPK-TRMTGHQQLVNHVYFSPDGQWVASASFD 381
V G S + L+ + P R T H +L V F+PDG + S D
Sbjct: 249 KVVGCRYGAGVSRSHHRSCSLFPGLPTAFPDFLRPTPHSRLPRSVLFNPDGCCLYSGCQD 308
Query: 382 KSIKLW 387
S++++
Sbjct: 309 -SLRVY 313
Score = 204 (76.9 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 58/166 (34%), Positives = 79/166 (47%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + +W + I L GH V S+ L+T L A +G E
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIV-AGSQSGSIRVWDLE 93
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P E + SGS D + LW+ K R GH Q V
Sbjct: 94 AAKI-LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVR 151
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+ FSPDG+W+ASA+ D ++KLW+ T GK ++ F GH GPV + F
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 197
Score = 191 (72.3 bits), Expect = 9.9e-12, P = 9.9e-12
Identities = 58/206 (28%), Positives = 97/206 (47%)
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETT 269
R + D +W ++ C++ L+GHT V V+ + +I GSQ +I+VW+
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
Query: 270 QGKLIRELKGHGHWVNSLALST--EYALRTGAFDHTGKQYSSPEEMKKAALERYN----- 322
K++R L GH + SL E+ + +G+ D K + + +K + RY
Sbjct: 94 AAKILRTLMGHKANICSLDFHPYGEF-VASGSQDTNIKLW---DIRRKGCVFRYRGHSQA 149
Query: 323 -KIKGNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+ +P+ L S +DD T+ LW+ K + GH VN V F P+ +AS S
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKM-MSEFPGHTGPVNVVEFHPNEYLLASGS 208
Query: 380 FDKSIKLWNGTTGKFVAVFRGHVGPV 405
D++I+ W+ + V+ G GPV
Sbjct: 209 SDRTIRFWDLEKFQVVSCIEGEPGPV 234
Score = 189 (71.6 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 43/136 (31%), Positives = 64/136 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ F P G +ASGS DT ++LWD+ + +F+ GH V C+ +S DG
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L S + ++ WD GK GH + + + P S S D
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSE-FPGHTGPVNVVEFHPNEY-----LLASGSSDRTI 213
Query: 223 RIWDVSLRKCVICLSG 238
R WD+ + V C+ G
Sbjct: 214 RFWDLEKFQVVSCIEG 229
Score = 168 (64.2 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 50/192 (26%), Positives = 85/192 (44%)
Query: 324 IKGNAPERLVS-GSDDFTMFLWEPAVSKQPKTR-MTGHQQLVNHVYFSPDGQWVASASFD 381
+ G A RL++ G DD + LW +++K +TGH V V + + + + S
Sbjct: 27 VLGKASGRLLATGGDDCRVNLW--SINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQS 84
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQIRF----ELIYCFRYPSNFY--------CVVDM- 428
SI++W+ K + GH + + F E + +N CV
Sbjct: 85 GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYR 144
Query: 429 --SCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKV 486
S + +S D + L S + D T+K+WD+ K+ + PGH V V++ P+ +
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 487 ASGGKDRVLKLW 498
ASG DR ++ W
Sbjct: 205 ASGSSDRTIRFW 216
Score = 146 (56.5 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 51/181 (28%), Positives = 81/181 (44%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C GH++AV + FSPDG+ LAS + D TV+LWDL M + GH V + +
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 160 ADGKHLVSGSKAGELQCWDPQT--------GKPSGNPLSGHKKWITGISWEPVHLNAPCR 211
+ L SGS ++ WD + G+P P+ W+ G+S P +
Sbjct: 199 PNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPG--PVRYAGSWVVGLSPPPKVVGCRYG 256
Query: 212 RFVSASKDGDARIWD--VSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKV--W 266
VS S ++ + + + H+ V + DG +Y+G QD +++V W
Sbjct: 257 AGVSRSHHRSCSLFPGLPTAFPDFLRPTPHSRLPRSVLFNPDGCCLYSGCQD-SLRVYGW 315
Query: 267 E 267
E
Sbjct: 316 E 316
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 49/173 (28%), Positives = 82/173 (47%)
Query: 324 IKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
++ N PE L V+GS ++ +W+ +K +T M GH+ + + F P G++VAS S D
Sbjct: 69 VRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDT 127
Query: 383 SIKLWNGTTGKFVAVFRGHVGPVYQIRFELI-YCFRYPSNFYCVV--DMSC--CMSLY-- 435
+IKLW+ V +RGH V +RF ++ + V D++ MS +
Sbjct: 128 NIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
Query: 436 --------SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEV-FAVDW 479
+ + LL SGS D T++ WD+ ++ + G V +A W
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRYAGSW 240
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 224 (83.9 bits), Expect = 9.6e-21, Sum P(2) = 9.6e-21
Identities = 59/188 (31%), Positives = 92/188 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+SAD +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSN-PI--IVSCGWDKMVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS 290
+N+L S
Sbjct: 235 TINALCFS 242
Score = 156 (60.0 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 66/229 (28%), Positives = 99/229 (43%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHSGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S + + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ ++ + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSN-PI-IVSCGWDKMVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRG 400
KT GH +N V SPDG AS D LW+ GK + G
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Score = 152 (58.6 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 67/263 (25%), Positives = 114/263 (43%)
Query: 148 GHKNWVLCIAWSADGKHLV-SGSKAGELQCWDPQTGKPS-GNP---LSGHKKWITGISWE 202
GH WV IA + ++ S S+ + W + + G P L GH +++ +
Sbjct: 13 GHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV-- 70
Query: 203 PVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDC 261
+++ + +S S DG R+WD++ GHT V V + D I +GS+D
Sbjct: 71 ---ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDK 127
Query: 262 TIKVWETTQG-KLIRELKGHGHWVNSLALSTEYA---LRTGAFDHTGKQYSSPE-EMKKA 316
TIK+W T K + H WV+ + S + + + +D K ++ ++K
Sbjct: 128 TIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTN 187
Query: 317 ALER--Y-NKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
+ Y N + + L SG D LW+ K T G +N + FSP+
Sbjct: 188 HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DTINALCFSPNR 245
Query: 373 QWVASASFDKSIKLWNGTTGKFV 395
W+ +A+ SIK+W+ GK +
Sbjct: 246 YWLCAAT-GPSIKIWD-LEGKII 266
Score = 146 (56.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 53/186 (28%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C TI HTE V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDT-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ LR+ +I + C W DG ++ G D I+V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELRQDIITTNSKAEPPQCTSLAWSADGQTLFAGYTDNLIRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 143 (55.4 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 53/184 (28%), Positives = 86/184 (46%)
Query: 236 LSGHTLAVTCVKWGGD--GVIYTGSQDCTIKVW-----ETTQGKLIRELKGHGHWVNSLA 288
L GH+ VT + +I + S+D TI +W ET G R L+GH H+V+ +
Sbjct: 11 LKGHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 289 LSTE--YALRTGAFDHTGKQYSSPEEMKKAALERYNK----IKGNAPER-LVSGSDDFTM 341
+S++ +AL +G++D T + + + K + +A R +VSGS D T+
Sbjct: 71 ISSDGQFAL-SGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTI 129
Query: 342 FLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQ--WVASASFDKSIKLWNGTTGKFVAVFR 399
LW + + H + V+ V FSP+ + S +DK +K+WN K
Sbjct: 130 KLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHI 189
Query: 400 GHVG 403
GH G
Sbjct: 190 GHTG 193
Score = 137 (53.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 438 SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKL 497
S+D + LSGS D TL++WD+ T + GH +V +V +S D ++ SG +D+ +KL
Sbjct: 72 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKL 131
Query: 498 W 498
W
Sbjct: 132 W 132
Score = 131 (51.2 bits), Expect = 8.7e-13, Sum P(2) = 8.7e-13
Identities = 28/86 (32%), Positives = 45/86 (52%)
Query: 329 PERLVSGSDDFTMFLWEPAVSKQ----PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
P+ ++S S D T+ +W+ + P+ + GH V+ V S DGQ+ S S+D ++
Sbjct: 28 PDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 87
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQIRF 410
+LW+ TTG F GH V + F
Sbjct: 88 RLWDLTTGTTTRRFVGHTKDVLSVAF 113
Score = 110 (43.8 bits), Expect = 8.7e-13, Sum P(2) = 8.7e-13
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 428 MSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 487
+SC +S ++ + +++S D +KVW++ KLK + GH + V SPDG A
Sbjct: 151 VSCVR--FSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCA 208
Query: 488 SGGKDRVLKLW 498
SGGKD LW
Sbjct: 209 SGGKDGQAMLW 219
Score = 100 (40.3 bits), Expect = 9.4e-12, Sum P(2) = 9.4e-12
Identities = 22/66 (33%), Positives = 40/66 (60%)
Query: 436 SWSADSRLLLSGSKDSTLKVWD-IRTQKLKQDLPGHADEVFAVDWSPDGEK--VASGGKD 492
++SAD+R ++SGS+D T+K+W+ + K H + V V +SP+ + S G D
Sbjct: 112 AFSADNRQIVSGSRDKTIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWD 171
Query: 493 RVLKLW 498
+++K+W
Sbjct: 172 KMVKVW 177
Score = 70 (29.7 bits), Expect = 9.6e-21, Sum P(2) = 9.6e-21
Identities = 15/67 (22%), Positives = 34/67 (50%)
Query: 441 SRLLLSGSKDSTLKVWDIR----TQKLKQDL-----PGHADEVFAVDWSPDGEKVASGGK 491
+R L + ++K+WD+ +L+QD+ + ++ WS DG+ + +G
Sbjct: 244 NRYWLCAATGPSIKIWDLEGKIIVDELRQDIITTNSKAEPPQCTSLAWSADGQTLFAGYT 303
Query: 492 DRVLKLW 498
D ++++W
Sbjct: 304 DNLIRVW 310
Score = 69 (29.3 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKVWDI 458
C SL +WSAD + L +G D+ ++VW +
Sbjct: 286 CTSL-AWSADGQTLFAGYTDNLIRVWQV 312
Score = 65 (27.9 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 438 SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKV-ASGGKDRVLK 496
S D L SG KD +WD+ K L G D + A+ +SP+ + A+ G +K
Sbjct: 201 SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GDTINALCFSPNRYWLCAATGPS--IK 257
Query: 497 LW 498
+W
Sbjct: 258 IW 259
Score = 44 (20.5 bits), Expect = 4.9e-18, Sum P(2) = 4.9e-18
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D I++W T G
Sbjct: 291 WSADGQTLFAGYTDNLIRVWQVTIG 315
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 273 (101.2 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 92/330 (27%), Positives = 143/330 (43%)
Query: 99 RCSA-TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
RCS T GHT V+ + F + LA+GS DTT+++WD T + GH++ + C+
Sbjct: 339 RCSIKTFKGHTNGVMCLQF--EDNILATGSYDTTIKIWDTETGEELRTLRGHESGIRCLQ 396
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+ D L+SGS ++ W+ +TG+ +GH+ + G+ H +A S S
Sbjct: 397 F--DDTKLISGSMDRTIKVWNWRTGECIST-YTGHRGGVIGL-----HFDASI--LASGS 446
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRE 276
D +IW+ K L GHT V V+ +++ S DCT+++W+ IR
Sbjct: 447 VDKTVKIWNFE-DKSTFSLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCIRT 505
Query: 277 LKGH-GHWVNSLALSTEYALR-------TGAFDHTGKQYSSPEEMKKAALE---RYNKIK 325
GH G + L E+ T P LE Y++
Sbjct: 506 FHGHVGQVQQVVPLPREFEFEEHDAECENDDLSTTSGDADPPSIQASMGLEPNAAYSQSS 565
Query: 326 --------GNA--PERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
G A P +V+ + D T+ LWE + +T GH + V + D +
Sbjct: 566 AFGTSFDNGRAAPPRYMVTSALDSTIRLWETTTGRCLRT-FFGHLEGVWAL--GADTLRI 622
Query: 376 ASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
S + D+ IK+W+ TGK F GH GPV
Sbjct: 623 VSGAEDRMIKIWDPRTGKCERTFTGHSGPV 652
Score = 203 (76.5 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 58/182 (31%), Positives = 89/182 (48%)
Query: 231 KCVI-CLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL 289
+C I GHT V C+++ D ++ TGS D TIK+W+T G+ +R L+GH + L
Sbjct: 339 RCSIKTFKGHTNGVMCLQFE-DNILATGSYDTTIKIWDTETGEELRTLRGHESGIRCLQF 397
Query: 290 STEYALRTGAFDHTGKQYS--SPEEMKKAALERYNKIKGNAPER-LVSGSDDFTMFLWEP 346
+ L +G+ D T K ++ + E + R I + L SGS D T+ +W
Sbjct: 398 D-DTKLISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHFDASILASGSVDKTVKIWN- 455
Query: 347 AVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVY 406
+ + GH VN V + V SAS D +++LW+ T + F GHVG V
Sbjct: 456 -FEDKSTFSLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCIRTFHGHVGQVQ 514
Query: 407 QI 408
Q+
Sbjct: 515 QV 516
Score = 168 (64.2 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 61/225 (27%), Positives = 105/225 (46%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
++ + ++ GHT+ V +V R + S S D TVRLWDL+T+T + GH V +
Sbjct: 458 DKSTFSLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCIRTFHGHVGQVQQVV 517
Query: 158 ----------WSADGKHLVSGSKAGELQCWDPQTGKPS-G-NPLSGHKKWIT-GISWEPV 204
A+ ++ + +G+ DP + + S G P + + + G S++
Sbjct: 518 PLPREFEFEEHDAECENDDLSTTSGDA---DPPSIQASMGLEPNAAYSQSSAFGTSFDNG 574
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTI 263
AP R V+++ D R+W+ + +C+ GH V + G D + I +G++D I
Sbjct: 575 RA-APPRYMVTSALDSTIRLWETTTGRCLRTFFGHLEGVWAL--GADTLRIVSGAEDRMI 631
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS 308
K+W+ GK R GH V + L + TG+ D + YS
Sbjct: 632 KIWDPRTGKCERTFTGHSGPVTCIGLG-DSRFATGSEDCEVRMYS 675
Score = 145 (56.1 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 41/156 (26%), Positives = 75/156 (48%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L +GS D T+ +W+ ++ +T + GH+ + + F D + S S D++IK+WN T
Sbjct: 362 LATGSYDTTIKIWDTETGEELRT-LRGHESGIRCLQF--DDTKLISGSMDRTIKVWNWRT 418
Query: 392 GKFVAVFRGHVGPVYQIRFEL-------------IYCFRYPSNFYCVVDMSCCMSLYSWS 438
G+ ++ + GH G V + F+ I+ F S F + + ++
Sbjct: 419 GECISTYTGHRGGVIGLHFDASILASGSVDKTVKIWNFEDKSTF-SLRGHTDWVNAVRVD 477
Query: 439 ADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEV 474
SR + S S D T+++WD+ T+ + GH +V
Sbjct: 478 TSSRTVFSASDDCTVRLWDLDTKTCIRTFHGHVGQV 513
Score = 122 (48.0 bits), Expect = 0.00045, P = 0.00045
Identities = 42/152 (27%), Positives = 66/152 (43%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFR 417
GH V + F + +A+ S+D +IK+W+ TG+ + RGH + ++F+
Sbjct: 347 GHTNGVMCLQF--EDNILATGSYDTTIKIWDTETGEELRTLRGHESGIRCLQFDDTKLIS 404
Query: 418 YPSNFYCVV---DMSCCMSLYSWSA--------DSRLLLSGSKDSTLKVWDIRTQKLKQD 466
+ V C+S Y+ D+ +L SGS D T+K+W+ K
Sbjct: 405 GSMDRTIKVWNWRTGECISTYTGHRGGVIGLHFDASILASGSVDKTVKIWNFE-DKSTFS 463
Query: 467 LPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L GH D V AV V S D ++LW
Sbjct: 464 LRGHTDWVNAVRVDTSSRTVFSASDDCTVRLW 495
Score = 99 (39.9 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 18/61 (29%), Positives = 38/61 (62%)
Query: 438 SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKL 497
+A R +++ + DST+++W+ T + + GH + V+A+ D ++ SG +DR++K+
Sbjct: 576 AAPPRYMVTSALDSTIRLWETTTGRCLRTFFGHLEGVWAL--GADTLRIVSGAEDRMIKI 633
Query: 498 W 498
W
Sbjct: 634 W 634
Score = 88 (36.0 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 17/65 (26%), Positives = 38/65 (58%)
Query: 434 LYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 493
+++ AD+ ++SG++D +K+WD RT K ++ GH+ V + + A+G +D
Sbjct: 612 VWALGADTLRIVSGAEDRMIKIWDPRTGKCERTFTGHSGPVTCIGLGDS--RFATGSEDC 669
Query: 494 VLKLW 498
++++
Sbjct: 670 EVRMY 674
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 225 (84.3 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 184 (69.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 71/245 (28%), Positives = 103/245 (42%)
Query: 268 TTQGKLIRELKGHGHWVNSLALSTEYA--LRTGAFDHT---------GKQYSSPEEMKKA 316
T Q L LKGH WV +A + ++ + + + D T Y P+ +
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 317 ALERYNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ + ++ + +SGS D T+ LW+ + R GH + V V FS D + +
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR-RFVGHTKDVLSVAFSSDNRQI 120
Query: 376 ASASFDKSIKLWNGTTG--KFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMS 433
S S DK+IKLWN T G K+ H E + C R+ N + +SC
Sbjct: 121 VSGSRDKTIKLWN-TLGVCKYTVQDESHS--------EWVSCVRFSPNSSNPIIVSC--- 168
Query: 434 LYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 493
W D +KVW++ KLK + GH + V SPDG ASGGKD
Sbjct: 169 --GW------------DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG 214
Query: 494 VLKLW 498
LW
Sbjct: 215 QAMLW 219
Score = 162 (62.1 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 74/282 (26%), Positives = 118/282 (41%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINA--- 238
Query: 412 LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTL 453
CF P+ ++ S+ W + ++++ K +
Sbjct: 239 --LCFS-PNRYWLCAATG--PSIKIWDLEGKIIVDELKQEVI 275
Score = 138 (53.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 68 (29.0 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKVWDI 458
C SL +WSAD + L +G D+ ++VW +
Sbjct: 286 CTSL-AWSADGQTLFAGYTDNLVRVWQV 312
Score = 43 (20.2 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 225 (84.3 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 184 (69.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 71/245 (28%), Positives = 103/245 (42%)
Query: 268 TTQGKLIRELKGHGHWVNSLALSTEYA--LRTGAFDHT---------GKQYSSPEEMKKA 316
T Q L LKGH WV +A + ++ + + + D T Y P+ +
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 317 ALERYNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ + ++ + +SGS D T+ LW+ + R GH + V V FS D + +
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR-RFVGHTKDVLSVAFSSDNRQI 120
Query: 376 ASASFDKSIKLWNGTTG--KFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMS 433
S S DK+IKLWN T G K+ H E + C R+ N + +SC
Sbjct: 121 VSGSRDKTIKLWN-TLGVCKYTVQDESHS--------EWVSCVRFSPNSSNPIIVSC--- 168
Query: 434 LYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 493
W D +KVW++ KLK + GH + V SPDG ASGGKD
Sbjct: 169 --GW------------DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG 214
Query: 494 VLKLW 498
LW
Sbjct: 215 QAMLW 219
Score = 162 (62.1 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 74/282 (26%), Positives = 118/282 (41%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINA--- 238
Query: 412 LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTL 453
CF P+ ++ S+ W + ++++ K +
Sbjct: 239 --LCFS-PNRYWLCAATG--PSIKIWDLEGKIIVDELKQEVI 275
Score = 138 (53.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 68 (29.0 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKVWDI 458
C SL +WSAD + L +G D+ ++VW +
Sbjct: 286 CTSL-AWSADGQTLFAGYTDNLVRVWQV 312
Score = 43 (20.2 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 225 (84.3 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 184 (69.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 71/245 (28%), Positives = 103/245 (42%)
Query: 268 TTQGKLIRELKGHGHWVNSLALSTEYA--LRTGAFDHT---------GKQYSSPEEMKKA 316
T Q L LKGH WV +A + ++ + + + D T Y P+ +
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 317 ALERYNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ + ++ + +SGS D T+ LW+ + R GH + V V FS D + +
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR-RFVGHTKDVLSVAFSSDNRQI 120
Query: 376 ASASFDKSIKLWNGTTG--KFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMS 433
S S DK+IKLWN T G K+ H E + C R+ N + +SC
Sbjct: 121 VSGSRDKTIKLWN-TLGVCKYTVQDESHS--------EWVSCVRFSPNSSNPIIVSC--- 168
Query: 434 LYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 493
W D +KVW++ KLK + GH + V SPDG ASGGKD
Sbjct: 169 --GW------------DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG 214
Query: 494 VLKLW 498
LW
Sbjct: 215 QAMLW 219
Score = 162 (62.1 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 74/282 (26%), Positives = 118/282 (41%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINA--- 238
Query: 412 LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTL 453
CF P+ ++ S+ W + ++++ K +
Sbjct: 239 --LCFS-PNRYWLCAATG--PSIKIWDLEGKIIVDELKQEVI 275
Score = 138 (53.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 68 (29.0 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKVWDI 458
C SL +WSAD + L +G D+ ++VW +
Sbjct: 286 CTSL-AWSADGQTLFAGYTDNLVRVWQV 312
Score = 43 (20.2 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 225 (84.3 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 184 (69.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 71/245 (28%), Positives = 103/245 (42%)
Query: 268 TTQGKLIRELKGHGHWVNSLALSTEYA--LRTGAFDHT---------GKQYSSPEEMKKA 316
T Q L LKGH WV +A + ++ + + + D T Y P+ +
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 317 ALERYNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ + ++ + +SGS D T+ LW+ + R GH + V V FS D + +
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR-RFVGHTKDVLSVAFSSDNRQI 120
Query: 376 ASASFDKSIKLWNGTTG--KFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMS 433
S S DK+IKLWN T G K+ H E + C R+ N + +SC
Sbjct: 121 VSGSRDKTIKLWN-TLGVCKYTVQDESHS--------EWVSCVRFSPNSSNPIIVSC--- 168
Query: 434 LYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 493
W D +KVW++ KLK + GH + V SPDG ASGGKD
Sbjct: 169 --GW------------DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG 214
Query: 494 VLKLW 498
LW
Sbjct: 215 QAMLW 219
Score = 162 (62.1 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 74/282 (26%), Positives = 118/282 (41%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINA--- 238
Query: 412 LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTL 453
CF P+ ++ S+ W + ++++ K +
Sbjct: 239 --LCFS-PNRYWLCAATG--PSIKIWDLEGKIIVDELKQEVI 275
Score = 138 (53.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 68 (29.0 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKVWDI 458
C SL +WSAD + L +G D+ ++VW +
Sbjct: 286 CTSL-AWSADGQTLFAGYTDNLVRVWQV 312
Score = 43 (20.2 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 225 (84.3 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 184 (69.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 71/245 (28%), Positives = 103/245 (42%)
Query: 268 TTQGKLIRELKGHGHWVNSLALSTEYA--LRTGAFDHT---------GKQYSSPEEMKKA 316
T Q L LKGH WV +A + ++ + + + D T Y P+ +
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 317 ALERYNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ + ++ + +SGS D T+ LW+ + R GH + V V FS D + +
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR-RFVGHTKDVLSVAFSSDNRQI 120
Query: 376 ASASFDKSIKLWNGTTG--KFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMS 433
S S DK+IKLWN T G K+ H E + C R+ N + +SC
Sbjct: 121 VSGSRDKTIKLWN-TLGVCKYTVQDESHS--------EWVSCVRFSPNSSNPIIVSC--- 168
Query: 434 LYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 493
W D +KVW++ KLK + GH + V SPDG ASGGKD
Sbjct: 169 --GW------------DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG 214
Query: 494 VLKLW 498
LW
Sbjct: 215 QAMLW 219
Score = 162 (62.1 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 74/282 (26%), Positives = 118/282 (41%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINA--- 238
Query: 412 LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTL 453
CF P+ ++ S+ W + ++++ K +
Sbjct: 239 --LCFS-PNRYWLCAATG--PSIKIWDLEGKIIVDELKQEVI 275
Score = 138 (53.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 68 (29.0 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKVWDI 458
C SL +WSAD + L +G D+ ++VW +
Sbjct: 286 CTSL-AWSADGQTLFAGYTDNLVRVWQV 312
Score = 43 (20.2 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 225 (84.3 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 184 (69.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 71/245 (28%), Positives = 103/245 (42%)
Query: 268 TTQGKLIRELKGHGHWVNSLALSTEYA--LRTGAFDHT---------GKQYSSPEEMKKA 316
T Q L LKGH WV +A + ++ + + + D T Y P+ +
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 317 ALERYNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ + ++ + +SGS D T+ LW+ + R GH + V V FS D + +
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR-RFVGHTKDVLSVAFSSDNRQI 120
Query: 376 ASASFDKSIKLWNGTTG--KFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMS 433
S S DK+IKLWN T G K+ H E + C R+ N + +SC
Sbjct: 121 VSGSRDKTIKLWN-TLGVCKYTVQDESHS--------EWVSCVRFSPNSSNPIIVSC--- 168
Query: 434 LYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 493
W D +KVW++ KLK + GH + V SPDG ASGGKD
Sbjct: 169 --GW------------DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG 214
Query: 494 VLKLW 498
LW
Sbjct: 215 QAMLW 219
Score = 162 (62.1 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 74/282 (26%), Positives = 118/282 (41%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINA--- 238
Query: 412 LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTL 453
CF P+ ++ S+ W + ++++ K +
Sbjct: 239 --LCFS-PNRYWLCAATG--PSIKIWDLEGKIIVDELKQEVI 275
Score = 138 (53.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 68 (29.0 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKVWDI 458
C SL +WSAD + L +G D+ ++VW +
Sbjct: 286 CTSL-AWSADGQTLFAGYTDNLVRVWQV 312
Score = 43 (20.2 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 225 (84.3 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 184 (69.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 71/245 (28%), Positives = 103/245 (42%)
Query: 268 TTQGKLIRELKGHGHWVNSLALSTEYA--LRTGAFDHT---------GKQYSSPEEMKKA 316
T Q L LKGH WV +A + ++ + + + D T Y P+ +
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 317 ALERYNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ + ++ + +SGS D T+ LW+ + R GH + V V FS D + +
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR-RFVGHTKDVLSVAFSSDNRQI 120
Query: 376 ASASFDKSIKLWNGTTG--KFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMS 433
S S DK+IKLWN T G K+ H E + C R+ N + +SC
Sbjct: 121 VSGSRDKTIKLWN-TLGVCKYTVQDESHS--------EWVSCVRFSPNSSNPIIVSC--- 168
Query: 434 LYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 493
W D +KVW++ KLK + GH + V SPDG ASGGKD
Sbjct: 169 --GW------------DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG 214
Query: 494 VLKLW 498
LW
Sbjct: 215 QAMLW 219
Score = 162 (62.1 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 74/282 (26%), Positives = 118/282 (41%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINA--- 238
Query: 412 LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTL 453
CF P+ ++ S+ W + ++++ K +
Sbjct: 239 --LCFS-PNRYWLCAATG--PSIKIWDLEGKIIVDELKQEVI 275
Score = 138 (53.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 68 (29.0 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKVWDI 458
C SL +WSAD + L +G D+ ++VW +
Sbjct: 286 CTSL-AWSADGQTLFAGYTDNLVRVWQV 312
Score = 43 (20.2 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 225 (84.3 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 184 (69.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 71/245 (28%), Positives = 103/245 (42%)
Query: 268 TTQGKLIRELKGHGHWVNSLALSTEYA--LRTGAFDHT---------GKQYSSPEEMKKA 316
T Q L LKGH WV +A + ++ + + + D T Y P+ +
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 317 ALERYNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ + ++ + +SGS D T+ LW+ + R GH + V V FS D + +
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR-RFVGHTKDVLSVAFSSDNRQI 120
Query: 376 ASASFDKSIKLWNGTTG--KFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMS 433
S S DK+IKLWN T G K+ H E + C R+ N + +SC
Sbjct: 121 VSGSRDKTIKLWN-TLGVCKYTVQDESHS--------EWVSCVRFSPNSSNPIIVSC--- 168
Query: 434 LYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 493
W D +KVW++ KLK + GH + V SPDG ASGGKD
Sbjct: 169 --GW------------DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG 214
Query: 494 VLKLW 498
LW
Sbjct: 215 QAMLW 219
Score = 162 (62.1 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 74/282 (26%), Positives = 118/282 (41%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINA--- 238
Query: 412 LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTL 453
CF P+ ++ S+ W + ++++ K +
Sbjct: 239 --LCFS-PNRYWLCAATG--PSIKIWDLEGKIIVDELKQEVI 275
Score = 138 (53.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 68 (29.0 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKVWDI 458
C SL +WSAD + L +G D+ ++VW +
Sbjct: 286 CTSL-AWSADGQTLFAGYTDNLVRVWQV 312
Score = 43 (20.2 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 225 (84.3 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 184 (69.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 71/245 (28%), Positives = 103/245 (42%)
Query: 268 TTQGKLIRELKGHGHWVNSLALSTEYA--LRTGAFDHT---------GKQYSSPEEMKKA 316
T Q L LKGH WV +A + ++ + + + D T Y P+ +
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 317 ALERYNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ + ++ + +SGS D T+ LW+ + R GH + V V FS D + +
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR-RFVGHTKDVLSVAFSSDNRQI 120
Query: 376 ASASFDKSIKLWNGTTG--KFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMS 433
S S DK+IKLWN T G K+ H E + C R+ N + +SC
Sbjct: 121 VSGSRDKTIKLWN-TLGVCKYTVQDESHS--------EWVSCVRFSPNSSNPIIVSC--- 168
Query: 434 LYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 493
W D +KVW++ KLK + GH + V SPDG ASGGKD
Sbjct: 169 --GW------------DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG 214
Query: 494 VLKLW 498
LW
Sbjct: 215 QAMLW 219
Score = 162 (62.1 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 74/282 (26%), Positives = 118/282 (41%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINA--- 238
Query: 412 LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTL 453
CF P+ ++ S+ W + ++++ K +
Sbjct: 239 --LCFS-PNRYWLCAATG--PSIKIWDLEGKIIVDELKQEVI 275
Score = 138 (53.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 68 (29.0 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKVWDI 458
C SL +WSAD + L +G D+ ++VW +
Sbjct: 286 CTSL-AWSADGQTLFAGYTDNLVRVWQV 312
Score = 43 (20.2 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 225 (84.3 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 184 (69.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 71/245 (28%), Positives = 103/245 (42%)
Query: 268 TTQGKLIRELKGHGHWVNSLALSTEYA--LRTGAFDHT---------GKQYSSPEEMKKA 316
T Q L LKGH WV +A + ++ + + + D T Y P+ +
Sbjct: 2 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 317 ALERYNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ + ++ + +SGS D T+ LW+ + R GH + V V FS D + +
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR-RFVGHTKDVLSVAFSSDNRQI 120
Query: 376 ASASFDKSIKLWNGTTG--KFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMS 433
S S DK+IKLWN T G K+ H E + C R+ N + +SC
Sbjct: 121 VSGSRDKTIKLWN-TLGVCKYTVQDESHS--------EWVSCVRFSPNSSNPIIVSC--- 168
Query: 434 LYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 493
W D +KVW++ KLK + GH + V SPDG ASGGKD
Sbjct: 169 --GW------------DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG 214
Query: 494 VLKLW 498
LW
Sbjct: 215 QAMLW 219
Score = 162 (62.1 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 74/282 (26%), Positives = 118/282 (41%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINA--- 238
Query: 412 LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTL 453
CF P+ ++ S+ W + ++++ K +
Sbjct: 239 --LCFS-PNRYWLCAATG--PSIKIWDLEGKIIVDELKQEVI 275
Score = 138 (53.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 68 (29.0 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKVWDI 458
C SL +WSAD + L +G D+ ++VW +
Sbjct: 286 CTSL-AWSADGQTLFAGYTDNLVRVWQV 312
Score = 43 (20.2 bits), Expect = 4.2e-18, Sum P(2) = 4.2e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 227 (85.0 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 67/226 (29%), Positives = 115/226 (50%)
Query: 107 HTEAVLSVAFSPDGRQL-ASGSGDTTVRLWDLNTQTPMF-----KCTGHKNWVLCIAWSA 160
HT+ V ++A D + + S D ++ LW L + + TGH ++V + S+
Sbjct: 14 HTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSS 73
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +SGS GEL+ WD TG+ + GH K + +++ + R+ VSAS+D
Sbjct: 74 DGQFALSGSWDGELRLWDLATGETTRR-FVGHTKDVLSVAFSTDN-----RQIVSASRDR 127
Query: 221 DARIWDVSLRKCVICLS---GHTLAVTCVKWGGDGVIYT---GSQDCTIKVWETTQGKLI 274
++W+ +L +C +S GH V+CV++ + ++ T S D T+KVW KL
Sbjct: 128 TIKLWN-TLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLR 186
Query: 275 RELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALE 319
L GH ++N++A+S + +L +G D + E K +LE
Sbjct: 187 NSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLE 232
Score = 226 (84.6 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 59/189 (31%), Positives = 95/189 (50%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D +RLWDL T + GH VL +A+S D +
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNR 118
Query: 164 HLVSGSKAGELQCWDPQTG-KPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+VS S+ ++ W+ K + + GHK+W++ + + P N VSAS D
Sbjct: 119 QIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSP---NTLVPTIVSASWDKTV 175
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHG 281
++W++ K L GH+ + V DG + +G +D I +W+ +GK + L+ G
Sbjct: 176 KVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA-G 234
Query: 282 HWVNSLALS 290
++SL S
Sbjct: 235 SIIHSLCFS 243
Score = 177 (67.4 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 88/333 (26%), Positives = 147/333 (44%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW-----DVSLRKCVICLSGHTLAV 243
+ H +T I+ P+ N+ V+AS+D +W D S L+GH+ V
Sbjct: 11 MRAHTDIVTAIA-TPID-NSDI--IVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
V DG +GS D +++W+ G+ R GH V S+A ST+ + + + D
Sbjct: 67 EDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRD 126
Query: 302 HTGKQYSSPEEMKKAALE-----RYNKIKGNAPERLV----SGSDDFTMFLWEPAVSKQP 352
T K +++ E K E + +P LV S S D T+ +W K
Sbjct: 127 RTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKL- 185
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFEL 412
+ + GH +N V SPDG AS D I LW+ GK ++ G +
Sbjct: 186 RNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK--KLYSLEAGSIIHS---- 239
Query: 413 IYCFRYPSNFY-CVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDL---P 468
CF P+ ++ C + S+ W +S+ ++ +D LKV D++++ K +
Sbjct: 240 -LCFS-PNRYWLCAATEN---SIRIWDLESKSVV---ED--LKV-DLKSEAEKNEGGVGT 288
Query: 469 GHADEVF---AVDWSPDGEKVASGGKDRVLKLW 498
G+ +V +++WS DG + SG D V+++W
Sbjct: 289 GNQKKVIYCTSLNWSADGSTLFSGYTDGVVRVW 321
Score = 69 (29.3 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKVWDI 458
C SL +WSAD L SG D ++VW I
Sbjct: 297 CTSL-NWSADGSTLFSGYTDGVVRVWGI 323
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 272 (100.8 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 76/254 (29%), Positives = 122/254 (48%)
Query: 104 IAGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H V S+ GR LA+G D V LW +N + TGH + V + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S+D +
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLMGHKANICSLDFHPYG------EFVASGSQDTN 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + CV GH+ AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 281 GHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALER----YNKIKGNAPER--LV 333
VN + EY L +G+ D T + + + + +E I N P+ L
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFN-PDGCCLY 247
Query: 334 SG-SDDFTMFLWEP 346
SG D ++ WEP
Sbjct: 248 SGCQDSLRVYGWEP 261
Score = 218 (81.8 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 53/168 (31%), Positives = 81/168 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ F P G +ASGS DT ++LWD+ + +F+ GH V C+ +S DG
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L S + ++ WD GK GH + + + P S S D
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSE-FPGHTGPVNVVEFHPNEY-----LLASGSSDRTI 213
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKV--WE 267
R WD+ + V C+ G V + + DG +Y+G QD +++V WE
Sbjct: 214 RFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQD-SLRVYGWE 260
Score = 204 (76.9 bits), Expect = 4.6e-13, P = 4.6e-13
Identities = 58/166 (34%), Positives = 79/166 (47%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + +W + I L GH V S+ L+T L A +G E
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIV-AGSQSGSIRVWDLE 93
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P E + SGS D + LW+ K R GH Q V
Sbjct: 94 AAKI-LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVR 151
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+ FSPDG+W+ASA+ D ++KLW+ T GK ++ F GH GPV + F
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 197
Score = 168 (64.2 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 50/192 (26%), Positives = 85/192 (44%)
Query: 324 IKGNAPERLVS-GSDDFTMFLWEPAVSKQPKTR-MTGHQQLVNHVYFSPDGQWVASASFD 381
+ G A RL++ G DD + LW +++K +TGH V V + + + + S
Sbjct: 27 VLGKASGRLLATGGDDCRVNLW--SINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQS 84
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQIRF----ELIYCFRYPSNFY--------CVVDM- 428
SI++W+ K + GH + + F E + +N CV
Sbjct: 85 GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYR 144
Query: 429 --SCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKV 486
S + +S D + L S + D T+K+WD+ K+ + PGH V V++ P+ +
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 487 ASGGKDRVLKLW 498
ASG DR ++ W
Sbjct: 205 ASGSSDRTIRFW 216
Score = 145 (56.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 53/185 (28%), Positives = 91/185 (49%)
Query: 324 IKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
++ N PE L V+GS ++ +W+ +K +T M GH+ + + F P G++VAS S D
Sbjct: 69 VRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDT 127
Query: 383 SIKLWNGTTGKFVAVFRGHVGPVYQIRFELI-YCFRYPSNFYCVV--DMSC--CMSLY-- 435
+IKLW+ V +RGH V +RF ++ + V D++ MS +
Sbjct: 128 NIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
Query: 436 --------SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 487
+ + LL SGS D T++ WD+ ++ + G V ++ ++PDG +
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLY 247
Query: 488 SGGKD 492
SG +D
Sbjct: 248 SGCQD 252
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C GH++AV + FSPDG+ LAS + D TV+LWDL M + GH V + +
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 160 ADGKHLVSGSKAGELQCWD 178
+ L SGS ++ WD
Sbjct: 199 PNEYLLASGSSDRTIRFWD 217
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 268 (99.4 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 72/252 (28%), Positives = 116/252 (46%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+ S I+GH V +A P A+G+GD +++WDL + TGH + V +A
Sbjct: 163 KLSRVISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAV 222
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
S +L S + +++CWD + K + GH + ++ P ++ ++ +
Sbjct: 223 STKHPYLFSCGEDRQVKCWDLEYNKVIRH-YHGHLSAVYSLALHPT-IDV----LATSGR 276
Query: 219 DGDARIWDVSLRKCVICLSGHTLAV-TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIREL 277
D ARIWD+ + V L+GHT V + V + I TGS D T+++W+ GK + L
Sbjct: 277 DSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTL 336
Query: 278 KGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKI----KGNAPERLV 333
H V S+ L + A KQ+ PE + + I N+ LV
Sbjct: 337 TNHKKSVRSIVLHPSLYMFASASPDNIKQWRCPEGKFVQNISGHTSIVNCMAANSEGVLV 396
Query: 334 SGSDDFTMFLWE 345
SG D+ TMF W+
Sbjct: 397 SGGDNGTMFFWD 408
Score = 221 (82.9 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 61/209 (29%), Positives = 95/209 (45%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH AV S+A P LA+ D+T R+WD+ T+ + TGH N V + A +
Sbjct: 254 GHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQI 313
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
++GS ++ WD GK S L+ HKK + I P F SAS D + + W
Sbjct: 314 ITGSHDSTVRLWDLAAGK-SVCTLTNHKKSVRSIVLHP-----SLYMFASASPD-NIKQW 366
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVN 285
K V +SGHT V C+ +GV+ +G + T+ W+ G + + V
Sbjct: 367 RCPEGKFVQNISGHTSIVNCMAANSEGVLVSGGDNGTMFFWDWRTGYNFQRFQAP---VQ 423
Query: 286 SLALSTEYALRTGAFDHTGKQYSSPEEMK 314
++ +E + FD +G + + E K
Sbjct: 424 PGSMDSEAGIFAMCFDQSGSRLITAEADK 452
Score = 132 (51.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 45/188 (23%), Positives = 78/188 (41%)
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
GN E +G+ D + +W+ A K K +TGH V V S ++ S D+ +K
Sbjct: 183 GN--EWFATGAGDRVIKIWDLASGKL-KLSLTGHVSTVRGVAVSTKHPYLFSCGEDRQVK 239
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRFE---------------LIYCFRYPSNFYCVVDMSC 430
W+ K + + GH+ VY + I+ R +N + + +
Sbjct: 240 CWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANVHTLTGHTN 299
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 490
++ A + +++GS DST+++WD+ K L H V ++ P AS
Sbjct: 300 TVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLHPSLYMFASAS 359
Query: 491 KDRVLKLW 498
D + K W
Sbjct: 360 PDNI-KQW 366
Score = 131 (51.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 41/159 (25%), Positives = 68/159 (42%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE---- 411
++GH V + P +W A+ + D+ IK+W+ +GK GHV V +
Sbjct: 168 ISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHP 227
Query: 412 -LIYCFR------YPSNFYCVV-----DMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIR 459
L C + + V+ +S SL L SG +DST ++WD+R
Sbjct: 228 YLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSG-RDSTARIWDMR 286
Query: 460 TQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
T+ L GH + V +V ++ +G D ++LW
Sbjct: 287 TKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLW 325
Score = 119 (46.9 bits), Expect = 0.00059, P = 0.00059
Identities = 47/188 (25%), Positives = 82/188 (43%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L + D T +W+ T +TGH V V + + S D +++LW+
Sbjct: 271 LATSGRDSTARIWDMRTKANVHT-LTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAA 329
Query: 392 GKFVAVFRGHVGPVYQIRFE-LIYCFRY--PSN---FYC-----VVDMSCCMSLYS-WSA 439
GK V H V I +Y F P N + C V ++S S+ + +A
Sbjct: 330 GKSVCTLTNHKKSVRSIVLHPSLYMFASASPDNIKQWRCPEGKFVQNISGHTSIVNCMAA 389
Query: 440 DSR-LLLSGSKDSTLKVWDIRT----QKLKQDL-PGHADE---VFAVDWSPDGEKVASGG 490
+S +L+SG + T+ WD RT Q+ + + PG D +FA+ + G ++ +
Sbjct: 390 NSEGVLVSGGDNGTMFFWDWRTGYNFQRFQAPVQPGSMDSEAGIFAMCFDQSGSRLITAE 449
Query: 491 KDRVLKLW 498
D+ +K++
Sbjct: 450 ADKTIKVY 457
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 225 (84.3 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 72/247 (29%), Positives = 115/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 62 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 121
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 122 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 178
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 179 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 237
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 238 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 295
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 296 ADGQTLF 302
Score = 184 (69.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 71/245 (28%), Positives = 103/245 (42%)
Query: 268 TTQGKLIRELKGHGHWVNSLALSTEYA--LRTGAFDHT---------GKQYSSPEEMKKA 316
T Q L LKGH WV +A + ++ + + + D T Y P+ +
Sbjct: 5 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG 64
Query: 317 ALERYNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ + ++ + +SGS D T+ LW+ + R GH + V V FS D + +
Sbjct: 65 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR-RFVGHTKDVLSVAFSSDNRQI 123
Query: 376 ASASFDKSIKLWNGTTG--KFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMS 433
S S DK+IKLWN T G K+ H E + C R+ N + +SC
Sbjct: 124 VSGSRDKTIKLWN-TLGVCKYTVQDESHS--------EWVSCVRFSPNSSNPIIVSC--- 171
Query: 434 LYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 493
W D +KVW++ KLK + GH + V SPDG ASGGKD
Sbjct: 172 --GW------------DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG 217
Query: 494 VLKLW 498
LW
Sbjct: 218 QAMLW 222
Score = 162 (62.1 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 74/282 (26%), Positives = 118/282 (41%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P P +SAS+D +W ++ + L GH+ V
Sbjct: 14 LKGHNGWVTQIATTP---QFP-DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 69
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 70 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 129
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 130 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKVWNLANCKL 187
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 188 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINA--- 241
Query: 412 LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTL 453
CF P+ ++ S+ W + ++++ K +
Sbjct: 242 --LCFS-PNRYWLCAATG--PSIKIWDLEGKIIVDELKQEVI 278
Score = 138 (53.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 51/186 (27%), Positives = 76/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V++W+L GH ++
Sbjct: 141 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNT 200
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 201 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 252
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 253 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 312
Query: 266 WETTQG 271
W+ T G
Sbjct: 313 WQVTIG 318
Score = 68 (29.0 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKVWDI 458
C SL +WSAD + L +G D+ ++VW +
Sbjct: 289 CTSL-AWSADGQTLFAGYTDNLVRVWQV 315
Score = 43 (20.2 bits), Expect = 6.5e-18, Sum P(2) = 6.5e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 294 WSADGQTLFAGYTDNLVRVWQVTIG 318
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 271 (100.5 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 75/254 (29%), Positives = 122/254 (48%)
Query: 104 IAGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H V S+ GR LA+G D V LW +N + TGH + V + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S+D +
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLMGHKANICSLDFHPYG------EFVASGSQDTN 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + CV GH+ AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 281 GHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALER----YNKIKGNAPER--LV 333
VN + EY L +G+ D T + + + + +E + N P+ L
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN-PDGCCLY 247
Query: 334 SG-SDDFTMFLWEP 346
SG D ++ WEP
Sbjct: 248 SGCQDSLRVYGWEP 261
Score = 219 (82.2 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 54/168 (32%), Positives = 81/168 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ F P G +ASGS DT ++LWD+ + +F+ GH V C+ +S DG
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L S + ++ WD GK GH + + + P S S D
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSE-FPGHTGPVNVVEFHPNEY-----LLASGSSDRTI 213
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKV--WE 267
R WD+ + V C+ G V V + DG +Y+G QD +++V WE
Sbjct: 214 RFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWE 260
Score = 204 (76.9 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 58/166 (34%), Positives = 79/166 (47%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + +W + I L GH V S+ L+T L A +G E
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIV-AGSQSGSIRVWDLE 93
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P E + SGS D + LW+ K R GH Q V
Sbjct: 94 AAKI-LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVR 151
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+ FSPDG+W+ASA+ D ++KLW+ T GK ++ F GH GPV + F
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 197
Score = 168 (64.2 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 50/192 (26%), Positives = 85/192 (44%)
Query: 324 IKGNAPERLVS-GSDDFTMFLWEPAVSKQPKTR-MTGHQQLVNHVYFSPDGQWVASASFD 381
+ G A RL++ G DD + LW +++K +TGH V V + + + + S
Sbjct: 27 VLGKASGRLLATGGDDCRVNLW--SINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQS 84
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQIRF----ELIYCFRYPSNFY--------CVVDM- 428
SI++W+ K + GH + + F E + +N CV
Sbjct: 85 GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYR 144
Query: 429 --SCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKV 486
S + +S D + L S + D T+K+WD+ K+ + PGH V V++ P+ +
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 487 ASGGKDRVLKLW 498
ASG DR ++ W
Sbjct: 205 ASGSSDRTIRFW 216
Score = 146 (56.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 54/185 (29%), Positives = 91/185 (49%)
Query: 324 IKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
++ N PE L V+GS ++ +W+ +K +T M GH+ + + F P G++VAS S D
Sbjct: 69 VRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDT 127
Query: 383 SIKLWNGTTGKFVAVFRGHVGPVYQIRFELI-YCFRYPSNFYCVV--DMSC--CMSLY-- 435
+IKLW+ V +RGH V +RF ++ + V D++ MS +
Sbjct: 128 NIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
Query: 436 --------SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 487
+ + LL SGS D T++ WD+ ++ + G V +V ++PDG +
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLY 247
Query: 488 SGGKD 492
SG +D
Sbjct: 248 SGCQD 252
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C GH++AV + FSPDG+ LAS + D TV+LWDL M + GH V + +
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 160 ADGKHLVSGSKAGELQCWD 178
+ L SGS ++ WD
Sbjct: 199 PNEYLLASGSSDRTIRFWD 217
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 271 (100.5 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 75/254 (29%), Positives = 122/254 (48%)
Query: 104 IAGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H V S+ GR LA+G D V LW +N + TGH + V + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S+D +
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLMGHKANICSLDFHPYG------EFVASGSQDTN 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + CV GH+ AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 281 GHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALER----YNKIKGNAPER--LV 333
VN + EY L +G+ D T + + + + +E + N P+ L
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN-PDGCCLY 247
Query: 334 SG-SDDFTMFLWEP 346
SG D ++ WEP
Sbjct: 248 SGCQDSLRVYGWEP 261
Score = 219 (82.2 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 54/168 (32%), Positives = 81/168 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ F P G +ASGS DT ++LWD+ + +F+ GH V C+ +S DG
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L S + ++ WD GK GH + + + P S S D
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSE-FPGHTGPVNVVEFHPNEY-----LLASGSSDRTI 213
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKV--WE 267
R WD+ + V C+ G V V + DG +Y+G QD +++V WE
Sbjct: 214 RFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWE 260
Score = 204 (76.9 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 58/166 (34%), Positives = 79/166 (47%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + +W + I L GH V S+ L+T L A +G E
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIV-AGSQSGSIRVWDLE 93
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P E + SGS D + LW+ K R GH Q V
Sbjct: 94 AAKI-LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVR 151
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+ FSPDG+W+ASA+ D ++KLW+ T GK ++ F GH GPV + F
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 197
Score = 168 (64.2 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 50/192 (26%), Positives = 85/192 (44%)
Query: 324 IKGNAPERLVS-GSDDFTMFLWEPAVSKQPKTR-MTGHQQLVNHVYFSPDGQWVASASFD 381
+ G A RL++ G DD + LW +++K +TGH V V + + + + S
Sbjct: 27 VLGKASGRLLATGGDDCRVNLW--SINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQS 84
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQIRF----ELIYCFRYPSNFY--------CVVDM- 428
SI++W+ K + GH + + F E + +N CV
Sbjct: 85 GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYR 144
Query: 429 --SCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKV 486
S + +S D + L S + D T+K+WD+ K+ + PGH V V++ P+ +
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 487 ASGGKDRVLKLW 498
ASG DR ++ W
Sbjct: 205 ASGSSDRTIRFW 216
Score = 146 (56.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 54/185 (29%), Positives = 91/185 (49%)
Query: 324 IKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
++ N PE L V+GS ++ +W+ +K +T M GH+ + + F P G++VAS S D
Sbjct: 69 VRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDT 127
Query: 383 SIKLWNGTTGKFVAVFRGHVGPVYQIRFELI-YCFRYPSNFYCVV--DMSC--CMSLY-- 435
+IKLW+ V +RGH V +RF ++ + V D++ MS +
Sbjct: 128 NIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
Query: 436 --------SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 487
+ + LL SGS D T++ WD+ ++ + G V +V ++PDG +
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLY 247
Query: 488 SGGKD 492
SG +D
Sbjct: 248 SGCQD 252
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C GH++AV + FSPDG+ LAS + D TV+LWDL M + GH V + +
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 160 ADGKHLVSGSKAGELQCWD 178
+ L SGS ++ WD
Sbjct: 199 PNEYLLASGSSDRTIRFWD 217
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 271 (100.5 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 75/254 (29%), Positives = 122/254 (48%)
Query: 104 IAGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H V S+ GR LA+G D V LW +N + TGH + V + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S+D +
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLMGHKANICSLDFHPYG------EFVASGSQDTN 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + CV GH+ AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 281 GHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALER----YNKIKGNAPER--LV 333
VN + EY L +G+ D T + + + + +E + N P+ L
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN-PDGCCLY 247
Query: 334 SG-SDDFTMFLWEP 346
SG D ++ WEP
Sbjct: 248 SGCQDSLRVYGWEP 261
Score = 219 (82.2 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 54/168 (32%), Positives = 81/168 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ F P G +ASGS DT ++LWD+ + +F+ GH V C+ +S DG
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L S + ++ WD GK GH + + + P S S D
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSE-FPGHTGPVNVVEFHPNEY-----LLASGSSDRTI 213
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKV--WE 267
R WD+ + V C+ G V V + DG +Y+G QD +++V WE
Sbjct: 214 RFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWE 260
Score = 204 (76.9 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 58/166 (34%), Positives = 79/166 (47%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + +W + I L GH V S+ L+T L A +G E
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIV-AGSQSGSIRVWDLE 93
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P E + SGS D + LW+ K R GH Q V
Sbjct: 94 AAKI-LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVR 151
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+ FSPDG+W+ASA+ D ++KLW+ T GK ++ F GH GPV + F
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 197
Score = 168 (64.2 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 50/192 (26%), Positives = 85/192 (44%)
Query: 324 IKGNAPERLVS-GSDDFTMFLWEPAVSKQPKTR-MTGHQQLVNHVYFSPDGQWVASASFD 381
+ G A RL++ G DD + LW +++K +TGH V V + + + + S
Sbjct: 27 VLGKASGRLLATGGDDCRVNLW--SINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQS 84
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQIRF----ELIYCFRYPSNFY--------CVVDM- 428
SI++W+ K + GH + + F E + +N CV
Sbjct: 85 GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYR 144
Query: 429 --SCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKV 486
S + +S D + L S + D T+K+WD+ K+ + PGH V V++ P+ +
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 487 ASGGKDRVLKLW 498
ASG DR ++ W
Sbjct: 205 ASGSSDRTIRFW 216
Score = 146 (56.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 54/185 (29%), Positives = 91/185 (49%)
Query: 324 IKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
++ N PE L V+GS ++ +W+ +K +T M GH+ + + F P G++VAS S D
Sbjct: 69 VRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDT 127
Query: 383 SIKLWNGTTGKFVAVFRGHVGPVYQIRFELI-YCFRYPSNFYCVV--DMSC--CMSLY-- 435
+IKLW+ V +RGH V +RF ++ + V D++ MS +
Sbjct: 128 NIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
Query: 436 --------SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 487
+ + LL SGS D T++ WD+ ++ + G V +V ++PDG +
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLY 247
Query: 488 SGGKD 492
SG +D
Sbjct: 248 SGCQD 252
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C GH++AV + FSPDG+ LAS + D TV+LWDL M + GH V + +
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 160 ADGKHLVSGSKAGELQCWD 178
+ L SGS ++ WD
Sbjct: 199 PNEYLLASGSSDRTIRFWD 217
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 271 (100.5 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 75/254 (29%), Positives = 122/254 (48%)
Query: 104 IAGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H V S+ GR LA+G D V LW +N + TGH + V + +
Sbjct: 16 IVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S+D +
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLMGHKANICSLDFHPYG------EFVASGSQDTN 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ + CV GH+ AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGH 188
Query: 281 GHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALER----YNKIKGNAPER--LV 333
VN + EY L +G+ D T + + + + +E + N P+ L
Sbjct: 189 TGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN-PDGCCLY 247
Query: 334 SG-SDDFTMFLWEP 346
SG D ++ WEP
Sbjct: 248 SGCQDSLRVYGWEP 261
Score = 219 (82.2 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 54/168 (32%), Positives = 81/168 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ F P G +ASGS DT ++LWD+ + +F+ GH V C+ +S DG
Sbjct: 100 TLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDG 159
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K L S + ++ WD GK GH + + + P S S D
Sbjct: 160 KWLASAADDHTVKLWDLTAGKMMSE-FPGHTGPVNVVEFHPNEY-----LLASGSSDRTI 213
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKV--WE 267
R WD+ + V C+ G V V + DG +Y+G QD +++V WE
Sbjct: 214 RFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVYGWE 260
Score = 204 (76.9 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 58/166 (34%), Positives = 79/166 (47%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + +W + I L GH V S+ L+T L A +G E
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIV-AGSQSGSIRVWDLE 93
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P E + SGS D + LW+ K R GH Q V
Sbjct: 94 AAKI-LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR-RKGCVFRYRGHSQAVR 151
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+ FSPDG+W+ASA+ D ++KLW+ T GK ++ F GH GPV + F
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF 197
Score = 168 (64.2 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 50/192 (26%), Positives = 85/192 (44%)
Query: 324 IKGNAPERLVS-GSDDFTMFLWEPAVSKQPKTR-MTGHQQLVNHVYFSPDGQWVASASFD 381
+ G A RL++ G DD + LW +++K +TGH V V + + + + S
Sbjct: 27 VLGKASGRLLATGGDDCRVNLW--SINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQS 84
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQIRF----ELIYCFRYPSNFY--------CVVDM- 428
SI++W+ K + GH + + F E + +N CV
Sbjct: 85 GSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYR 144
Query: 429 --SCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKV 486
S + +S D + L S + D T+K+WD+ K+ + PGH V V++ P+ +
Sbjct: 145 GHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLL 204
Query: 487 ASGGKDRVLKLW 498
ASG DR ++ W
Sbjct: 205 ASGSSDRTIRFW 216
Score = 146 (56.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 54/185 (29%), Positives = 91/185 (49%)
Query: 324 IKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
++ N PE L V+GS ++ +W+ +K +T M GH+ + + F P G++VAS S D
Sbjct: 69 VRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDT 127
Query: 383 SIKLWNGTTGKFVAVFRGHVGPVYQIRFELI-YCFRYPSNFYCVV--DMSC--CMSLY-- 435
+IKLW+ V +RGH V +RF ++ + V D++ MS +
Sbjct: 128 NIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPG 187
Query: 436 --------SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 487
+ + LL SGS D T++ WD+ ++ + G V +V ++PDG +
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLY 247
Query: 488 SGGKD 492
SG +D
Sbjct: 248 SGCQD 252
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C GH++AV + FSPDG+ LAS + D TV+LWDL M + GH V + +
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 160 ADGKHLVSGSKAGELQCWD 178
+ L SGS ++ WD
Sbjct: 199 PNEYLLASGSSDRTIRFWD 217
>UNIPROTKB|F1P1L6 [details] [associations]
symbol:AAMP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0009986 "cell surface" evidence=IEA] [GO:0014909
"smooth muscle cell migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009986 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00690000102167 GO:GO:0014909 EMBL:AADN02016792
IPI:IPI00586339 Ensembl:ENSGALT00000018663 ArrayExpress:F1P1L6
Uniprot:F1P1L6
Length = 408
Score = 232 (86.7 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 80/326 (24%), Positives = 145/326 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
T + H+ +V V+ P LA +G D +W L+ +F+C+GHK+ V C +S D
Sbjct: 60 TFSLHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECSGHKDSVTCAGFSHD 119
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP-VHLNAPCRRFVSASKDG 220
+ +G +G ++ W T + + + G +W+ W P H+ ++ + DG
Sbjct: 120 SVFVATGDMSGLIKVWRVDTKEEAWSFEVGDLEWM---EWHPQAHV------LLAGTADG 170
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKG 279
++ +W + C G TC K DG G +D T+++W+ QG + LKG
Sbjct: 171 NSWMWKIPSGDCKT-FQGPACPATCGKILPDGKRAVVGYEDGTMRIWDLKQGTSLHVLKG 229
Query: 280 H-GHW--VNSLALSTEYAL-RTGAFD-H-------TGKQ---YSSPEEMKKAALERYNKI 324
GH + +A + + +L TG+ D H TGK + KA +
Sbjct: 230 QDGHQDPLTCVASNQDGSLILTGSVDCHAKLVNSATGKVVCVFKMESAAPKAPASEGEEA 289
Query: 325 KGNAPERL---------VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ N+ E L G D T+ +++ +S Q H+ + + + + V
Sbjct: 290 ESNSVESLGFCNVMPLAAVGYLDGTLAIYD--LSTQSLRHKCQHESGIVQLLWEENSAVV 347
Query: 376 ASASFDKSIKLWNGTTGKFVAVFRGH 401
+ S D +++LW+ +GK ++ +RGH
Sbjct: 348 YTCSLDGAVRLWDARSGKMISEYRGH 373
Score = 156 (60.0 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 76/295 (25%), Positives = 115/295 (38%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVW--ETTQ 270
V+ +D A +W +S + + SGH +VTC + D V + TG IKVW +T +
Sbjct: 82 VTGGEDDKAFVWRLSDGELLFECSGHKDSVTCAGFSHDSVFVATGDMSGLIKVWRVDTKE 141
Query: 271 GKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPE-EMKK----AALERYNKIK 325
E+ G W+ + + L G D + P + K A KI
Sbjct: 142 EAWSFEV-GDLEWMEWHPQA--HVLLAGTADGNSWMWKIPSGDCKTFQGPACPATCGKIL 198
Query: 326 GNAPERLVSGSDDFTMFLWE--PAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKS 383
+ +R V G +D TM +W+ S GHQ + V + DG + + S D
Sbjct: 199 PDG-KRAVVGYEDGTMRIWDLKQGTSLHVLKGQDGHQDPLTCVASNQDGSLILTGSVDCH 257
Query: 384 IKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRL 443
KL N TGK V VF+ E SN V + C + L
Sbjct: 258 AKLVNSATGKVVCVFKMESAAPKAPASE---GEEAESN--SVESLGFCNVM-------PL 305
Query: 444 LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
G D TL ++D+ TQ L+ H + + W + V + D ++LW
Sbjct: 306 AAVGYLDGTLAIYDLSTQSLRHKCQ-HESGIVQLLWEENSAVVYTCSLDGAVRLW 359
Score = 149 (57.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 56/209 (26%), Positives = 93/209 (44%)
Query: 118 PDGRQLASGSGDTTVRLWDLNTQTPMFKCTG---HKNWVLCIAWSADGKHLVSGSKAGEL 174
PDG++ G D T+R+WDL T + G H++ + C+A + DG +++GS
Sbjct: 199 PDGKRAVVGYEDGTMRIWDLKQGTSLHVLKGQDGHQDPLTCVASNQDGSLILTGSVDCHA 258
Query: 175 QCWDPQTGK-------PSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK---DGDARI 224
+ + TGK S P + + S V C A+ DG I
Sbjct: 259 KLVNSATGKVVCVFKMESAAPKAPASEGEEAES-NSVESLGFCNVMPLAAVGYLDGTLAI 317
Query: 225 WDVS---LR-KCVICLSGHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQGKLIRELKG 279
+D+S LR KC H + + W V+YT S D +++W+ GK+I E +G
Sbjct: 318 YDLSTQSLRHKCQ-----HESGIVQLLWEENSAVVYTCSLDGAVRLWDARSGKMISEYRG 372
Query: 280 HGHWVNSLALSTEYALR-TGAFDHTGKQY 307
H + A++ + ++ T + DH K +
Sbjct: 373 HSAEILDFAVNKDASIVVTTSGDHQAKVF 401
Score = 75 (31.5 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
W +S ++ + S D +++WD R+ K+ + GH+ E+ + D V + D K
Sbjct: 340 WEENSAVVYTCSLDGAVRLWDARSGKMISEYRGHSAEILDFAVNKDASIVVTTSGDHQAK 399
Query: 497 LW 498
++
Sbjct: 400 VF 401
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 267 (99.0 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 83/306 (27%), Positives = 139/306 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH V +V FSPD +ASG D V++W +T ++ GH + I+WS DG
Sbjct: 172 LRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGA 231
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+ SGS ++ W+ TGK P GH ++ I++ P VS S D
Sbjct: 232 TIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKG-----NMLVSGSYDEAVF 286
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+WDV + + L H+ V+ + DG + + D +++W+T+ G+ +R L +
Sbjct: 287 LWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLVHEDN 346
Query: 283 W-VNSLALST--EYALR------TGAFDHT-G---KQYSSPEEMK---KAALERYNK-IK 325
V+S+ S +Y L +D+ G K Y K A Y + I
Sbjct: 347 PPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIP 406
Query: 326 GNAPERL--VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHV--YFSPDGQWVASASFD 381
G P VSGS+D + W+ V+K+ R+ H +V V + +G+++ S D
Sbjct: 407 GRTPGYAFAVSGSEDGAILCWD-VVTKKVLQRIEAHDGVVLGVDTCSTGEGRFMVSCGLD 465
Query: 382 KSIKLW 387
++++W
Sbjct: 466 GTVRVW 471
Score = 239 (89.2 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 77/320 (24%), Positives = 140/320 (43%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
L GH + ++ + + P S DG ++W S K + GH ++ + W
Sbjct: 172 LRGHLRGVSAVRFSP-----DASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISW 226
Query: 249 GGDGV-IYTGSQDCTIKVWETTQGKLI-RELKGHGHWVNSLALSTE-YALRTGAFDHTGK 305
DG I +GS D TI++W GK GH ++V ++A S + L +G++D
Sbjct: 227 SPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVF 286
Query: 306 QYS--SPEEMKK--AALERYNKIKGNAPERLVSG-SDDFTMFLWEPAVSKQPKTRMTGHQ 360
+ S MK A + + I L++ + D + +W+ + + +T +
Sbjct: 287 LWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLVHEDN 346
Query: 361 QLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPS 420
V+ V FSP+G++V + + D ++LW+ G+ + ++GH Y + S
Sbjct: 347 PPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSL-----------S 395
Query: 421 NFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWS 480
+ V S + + +SGS+D + WD+ T+K+ Q + H V VD
Sbjct: 396 GAFGVYGQS----IPGRTPGYAFAVSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTC 451
Query: 481 PDGEK--VASGGKDRVLKLW 498
GE + S G D +++W
Sbjct: 452 STGEGRFMVSCGLDGTVRVW 471
Score = 232 (86.7 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 64/195 (32%), Positives = 101/195 (51%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT----QTPMFKCTGHKNWVLCIAW 158
T GH + ++++SPDG +ASGS D T+RLW++ T TP GH N+V IA+
Sbjct: 213 TFEGHLAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFI---GHHNYVYAIAF 269
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGIS--WEPVHLNAPCRRFVSA 216
S G LVSGS + WD ++ + + L H ++GI W+ L A C
Sbjct: 270 SPKGNMLVSGSYDEAVFLWDVRSARVMKS-LPAHSDPVSGIDVVWDGT-LIASC------ 321
Query: 217 SKDGDARIWDVSLRKCVICLSGH-TLAVTCVKWGGDG--VIYTGSQDCTIKVWETTQGKL 273
+ DG RIWD S +C+ L V+ VK+ +G V+ DC +++W+ +G+
Sbjct: 322 ATDGLVRIWDTSTGQCLRTLVHEDNPPVSSVKFSPNGKYVLAWTLDDC-VRLWDYVEGRC 380
Query: 274 IRELKGHGHWVNSLA 288
++ +GH + SL+
Sbjct: 381 LKTYQGHSNKKYSLS 395
Score = 177 (67.4 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 46/171 (26%), Positives = 85/171 (49%)
Query: 347 AVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVY 406
+V+ + K + GH + V+ V FSPD +AS D ++K+W +TGK + F GH+ +
Sbjct: 163 SVNYRQKFLLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGIS 222
Query: 407 QIRF-------------ELIYCFR------YPSNFYCVVDMSCCMSLYSWSADSRLLLSG 447
I + + I + +P+ F + + ++S +L+SG
Sbjct: 223 TISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPF---IGHHNYVYAIAFSPKGNMLVSG 279
Query: 448 SKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
S D + +WD+R+ ++ + LP H+D V +D DG +AS D ++++W
Sbjct: 280 SYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIW 330
Score = 130 (50.8 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 53/193 (27%), Positives = 88/193 (45%)
Query: 89 QAVFR--IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC 146
+AVF +R R ++ H++ V + DG +AS + D VR+WD +T +
Sbjct: 283 EAVFLWDVRSA-RVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTL 341
Query: 147 TGHKNW-VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGH--KKWIT----GI 199
N V + +S +GK++++ + ++ WD G+ GH KK+ G+
Sbjct: 342 VHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCL-KTYQGHSNKKYSLSGAFGV 400
Query: 200 SWEPVHLNAPCRRF-VSASKDGDARIWDVSLRKCVICLSGH---TLAV-TCVKWGGDGVI 254
+ + P F VS S+DG WDV +K + + H L V TC G ++
Sbjct: 401 YGQSIPGRTPGYAFAVSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTCSTGEGRFMV 460
Query: 255 YTGSQDCTIKVWE 267
G D T++VWE
Sbjct: 461 SCGL-DGTVRVWE 472
Score = 128 (50.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 38/146 (26%), Positives = 60/146 (41%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
F GH V + +S D + SG G ++ W TGK GH I+ ISW P
Sbjct: 170 FLLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYT-FEGHLAGISTISWSP 228
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKC-VICLSGHTLAVTCVKWGGDG-VIYTGSQDC 261
S S D R+W+V K GH V + + G ++ +GS D
Sbjct: 229 DGAT-----IASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDE 283
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
+ +W+ ++++ L H V+ +
Sbjct: 284 AVFLWDVRSARVMKSLPAHSDPVSGI 309
Score = 42 (19.8 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 14/60 (23%), Positives = 25/60 (41%)
Query: 438 SADSRLLLSGSKDSTLKVWDI-----RTQKLKQDLPGHA---DEVFAVDWSPDGEKVASG 489
+ + R ++S D T++VW+ + + PG D+ DW D E +G
Sbjct: 453 TGEGRFMVSCGLDGTVRVWEEVGPEREPEPEPEPEPGQCPDQDQDQGRDWDMDSEMREAG 512
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 226 (84.6 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 69/302 (22%), Positives = 131/302 (43%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
R T+ GH + ++ + D R L S S D + +WD T + +WV+ A+
Sbjct: 2 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 61
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPS---GNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ G + G + +T + + L GH +++ + L+ + ++
Sbjct: 62 APSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF----LDD--NQIIT 115
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLI 274
+S D +WD+ + + +GH+ V + DG + +G+ D +IK+W+
Sbjct: 116 SSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCR 175
Query: 275 RELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG------- 326
+ GH +N++A YA TG+ D T + + + + N I G
Sbjct: 176 QTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFS 235
Query: 327 NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
+ L++G DDF +W+ A+ + GH V+ + + DG VA+ S+D +K+
Sbjct: 236 RSGRLLLAGYDDFNCNIWD-AMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI 294
Query: 387 WN 388
WN
Sbjct: 295 WN 296
Score = 177 (67.4 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 69/269 (25%), Positives = 114/269 (42%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT-GKPSGNPLSGHKKWITGISWEPVHL 206
GH + + W D + LVS S+ G+L WD T K PL W+ ++
Sbjct: 9 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAY----- 61
Query: 207 NAPCRRFVSASK-DGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGVIYTGSQDC 261
AP FV+ D I+ + R+ + +S GHT ++C ++ D I T S D
Sbjct: 62 -APSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDT 120
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEM-KKAALE 319
T +W+ G+ GH V SL+L+ + +GA D + K + + M ++ +
Sbjct: 121 TCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIG 180
Query: 320 RYNKIKGNA--PE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV---NHVYFSPDG 372
+ I A P +GSDD T L++ ++ M H ++ V FS G
Sbjct: 181 HESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQE--LLMYSHDNIICGITSVAFSRSG 238
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGH 401
+ + + D + +W+ G V GH
Sbjct: 239 RLLLAGYDDFNCNIWDAMKGDRAGVLAGH 267
Score = 136 (52.9 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 52/223 (23%), Positives = 88/223 (39%)
Query: 236 LSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-Y 293
L GH + + WG D ++ + SQD + +W++ + + WV + A +
Sbjct: 7 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 66
Query: 294 ALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA----------PERLVSGSDDFTMFL 343
+ G D+ YS + R ++ G+ ++++ S D T L
Sbjct: 67 FVACGGLDNICSIYSLKTREGNVRVSR--ELPGHTGYLSCCRFLDDNQIITSSGDTTCAL 124
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W+ +Q GH V + +PDG+ S + D SIKLW+ F GH
Sbjct: 125 WDIETGQQT-VGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHES 183
Query: 404 PVYQIRF-ELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLL 445
+ + F Y F S+ D +C L+ AD LL+
Sbjct: 184 DINAVAFFPNGYAFTTGSD-----DATC--RLFDLRADQELLM 219
Score = 118 (46.6 bits), Expect = 0.00032, P = 0.00032
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 428 MSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 487
+SCC L D +++ S D+T +WDI T + GH+ +V ++ +PDG
Sbjct: 102 LSCCRFL-----DDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFV 156
Query: 488 SGGKDRVLKLW 498
SG D +KLW
Sbjct: 157 SGACDASIKLW 167
Score = 102 (41.0 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 23/69 (33%), Positives = 34/69 (49%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
C ++ ++S RLLL+G D +WD L GH + V + + DG VA+G
Sbjct: 227 CGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATG 286
Query: 490 GKDRVLKLW 498
D LK+W
Sbjct: 287 SWDSFLKIW 295
Score = 44 (20.5 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 440 DSRLLLSGSKDSTLKVWD 457
D + +GS DS LK+W+
Sbjct: 279 DGMAVATGSWDSFLKIWN 296
>UNIPROTKB|F1ND84 [details] [associations]
symbol:AAMP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0009986 "cell surface" evidence=IEA] [GO:0014909
"smooth muscle cell migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009986 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00690000102167 OMA:VWSFEVG GO:GO:0014909
EMBL:AADN02016792 IPI:IPI00821947 Ensembl:ENSGALT00000038174
ArrayExpress:F1ND84 Uniprot:F1ND84
Length = 411
Score = 232 (86.7 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 80/326 (24%), Positives = 145/326 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
T + H+ +V V+ P LA +G D +W L+ +F+C+GHK+ V C +S D
Sbjct: 63 TFSLHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECSGHKDSVTCAGFSHD 122
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP-VHLNAPCRRFVSASKDG 220
+ +G +G ++ W T + + + G +W+ W P H+ ++ + DG
Sbjct: 123 SVFVATGDMSGLIKVWRVDTKEEAWSFEVGDLEWM---EWHPQAHV------LLAGTADG 173
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKG 279
++ +W + C G TC K DG G +D T+++W+ QG + LKG
Sbjct: 174 NSWMWKIPSGDCKT-FQGPACPATCGKILPDGKRAVVGYEDGTMRIWDLKQGTSLHVLKG 232
Query: 280 H-GHW--VNSLALSTEYAL-RTGAFD-H-------TGKQ---YSSPEEMKKAALERYNKI 324
GH + +A + + +L TG+ D H TGK + KA +
Sbjct: 233 QDGHQDPLTCVASNQDGSLILTGSVDCHAKLVNSATGKVVCVFKMESAAPKAPASEGEEA 292
Query: 325 KGNAPERL---------VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ N+ E L G D T+ +++ +S Q H+ + + + + V
Sbjct: 293 ESNSVESLGFCNVMPLAAVGYLDGTLAIYD--LSTQSLRHKCQHESGIVQLLWEENSAVV 350
Query: 376 ASASFDKSIKLWNGTTGKFVAVFRGH 401
+ S D +++LW+ +GK ++ +RGH
Sbjct: 351 YTCSLDGAVRLWDARSGKMISEYRGH 376
Score = 156 (60.0 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 76/295 (25%), Positives = 115/295 (38%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVW--ETTQ 270
V+ +D A +W +S + + SGH +VTC + D V + TG IKVW +T +
Sbjct: 85 VTGGEDDKAFVWRLSDGELLFECSGHKDSVTCAGFSHDSVFVATGDMSGLIKVWRVDTKE 144
Query: 271 GKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPE-EMKK----AALERYNKIK 325
E+ G W+ + + L G D + P + K A KI
Sbjct: 145 EAWSFEV-GDLEWMEWHPQA--HVLLAGTADGNSWMWKIPSGDCKTFQGPACPATCGKIL 201
Query: 326 GNAPERLVSGSDDFTMFLWE--PAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKS 383
+ +R V G +D TM +W+ S GHQ + V + DG + + S D
Sbjct: 202 PDG-KRAVVGYEDGTMRIWDLKQGTSLHVLKGQDGHQDPLTCVASNQDGSLILTGSVDCH 260
Query: 384 IKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRL 443
KL N TGK V VF+ E SN V + C + L
Sbjct: 261 AKLVNSATGKVVCVFKMESAAPKAPASE---GEEAESN--SVESLGFCNVM-------PL 308
Query: 444 LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
G D TL ++D+ TQ L+ H + + W + V + D ++LW
Sbjct: 309 AAVGYLDGTLAIYDLSTQSLRHKCQ-HESGIVQLLWEENSAVVYTCSLDGAVRLW 362
Score = 149 (57.5 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 56/209 (26%), Positives = 93/209 (44%)
Query: 118 PDGRQLASGSGDTTVRLWDLNTQTPMFKCTG---HKNWVLCIAWSADGKHLVSGSKAGEL 174
PDG++ G D T+R+WDL T + G H++ + C+A + DG +++GS
Sbjct: 202 PDGKRAVVGYEDGTMRIWDLKQGTSLHVLKGQDGHQDPLTCVASNQDGSLILTGSVDCHA 261
Query: 175 QCWDPQTGK-------PSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK---DGDARI 224
+ + TGK S P + + S V C A+ DG I
Sbjct: 262 KLVNSATGKVVCVFKMESAAPKAPASEGEEAES-NSVESLGFCNVMPLAAVGYLDGTLAI 320
Query: 225 WDVS---LR-KCVICLSGHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQGKLIRELKG 279
+D+S LR KC H + + W V+YT S D +++W+ GK+I E +G
Sbjct: 321 YDLSTQSLRHKCQ-----HESGIVQLLWEENSAVVYTCSLDGAVRLWDARSGKMISEYRG 375
Query: 280 HGHWVNSLALSTEYALR-TGAFDHTGKQY 307
H + A++ + ++ T + DH K +
Sbjct: 376 HSAEILDFAVNKDASIVVTTSGDHQAKVF 404
Score = 75 (31.5 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
W +S ++ + S D +++WD R+ K+ + GH+ E+ + D V + D K
Sbjct: 343 WEENSAVVYTCSLDGAVRLWDARSGKMISEYRGHSAEILDFAVNKDASIVVTTSGDHQAK 402
Query: 497 LW 498
++
Sbjct: 403 VF 404
>UNIPROTKB|I3LI24 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=IEA]
[GO:0051898 "negative regulation of protein kinase B signaling
cascade" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=IEA] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=IEA] [GO:0008200
"ion channel inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0001891 "phagocytic cup"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:2001244
GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 Ensembl:ENSSSCT00000022602
Uniprot:I3LI24
Length = 317
Score = 223 (83.6 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 72/247 (29%), Positives = 114/247 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D
Sbjct: 119 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVN 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+W+++ K GHT + V DG + +G +D +W+ +GK + L G G
Sbjct: 176 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 234
Query: 283 WVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSG 335
+N+L S Y L TG +D GK +E+K+ + +K + L
Sbjct: 235 IINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELKQEVISTSSKAEPPQCTSLAWS 292
Query: 336 SDDFTMF 342
+D T+F
Sbjct: 293 ADGQTLF 299
Score = 171 (65.3 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 71/245 (28%), Positives = 99/245 (40%)
Query: 268 TTQGKLIRELKGHGHWVNSLAL--STEYALRTGAFDHT---------GKQYSSPEEMKKA 316
T Q L LKGH WV L+ T+ + D T Y P+ +
Sbjct: 2 TEQMTLRGTLKGHNGWVTQLSAHAETQRLFLSCRRDKTIIMWKLTRDETNYGIPQRALRG 61
Query: 317 ALERYNKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
+ + ++ + +SGS D T+ LW+ + R GH + V V FS D + +
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR-RFVGHTKDVLSVAFSSDNRQI 120
Query: 376 ASASFDKSIKLWNGTTG--KFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMS 433
S S DK+IKLWN T G K+ H E + C R+ N + +SC
Sbjct: 121 VSGSRDKTIKLWN-TLGVCKYTVQDESHS--------EWVSCVRFSPNSSNPIIVSC--- 168
Query: 434 LYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 493
W D + VW++ KLK + GH + V SPDG ASGGKD
Sbjct: 169 --GW------------DKLVNVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG 214
Query: 494 VLKLW 498
LW
Sbjct: 215 QAMLW 219
Score = 163 (62.4 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 73/282 (25%), Positives = 117/282 (41%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T +S H R F+S +D +W ++ + L GH+ V
Sbjct: 11 LKGHNGWVTQLS---AHAETQ-RLFLSCRRDKTIIMWKLTRDETNYGIPQRALRGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +GS D T+++W+ T G R GH V S+A S++ + +G+ D
Sbjct: 67 SDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVNVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE 411
KT GH +N V SPDG AS D LW+ GK + G G +
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG--GDIINA--- 238
Query: 412 LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTL 453
CF P+ ++ S+ W + ++++ K +
Sbjct: 239 --LCFS-PNRYWLCAATG--PSIKIWDLEGKIIVDELKQEVI 275
Score = 136 (52.9 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 51/186 (27%), Positives = 75/186 (40%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C T+ H+E V V FSP+ + S D V +W+L GH ++
Sbjct: 138 CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVNVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK L G I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LDGGDI-INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ L++ VI S C W DG ++ G D ++V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 68 (29.0 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKVWDI 458
C SL +WSAD + L +G D+ ++VW +
Sbjct: 286 CTSL-AWSADGQTLFAGYTDNLVRVWQV 312
Score = 43 (20.2 bits), Expect = 9.3e-18, Sum P(2) = 9.3e-18
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D +++W T G
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQVTIG 315
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 198 (74.8 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 76/306 (24%), Positives = 138/306 (45%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQ-G 271
V A+ +++++S C I L GHT + + G+++ ++D +I+VW + G
Sbjct: 361 VVATNSPQLKVFELSTSHCQI-LYGHTETILALDVFRKGLMFVSCAKDKSIRVWRMNKDG 419
Query: 272 KLIRELKG--HGHWVNSLALST--EYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGN 327
+++ +G H H V +++ S E + T + D T K ++ PE + +K K
Sbjct: 420 RVVCVAQGLGHAHGVGAVSCSRLKESFVVTSSQDCTIKVWNIPESLT-------SKAKA- 471
Query: 328 APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
L+SG + + Q R GH + +N V SP+ + +A+ S D+ KLW
Sbjct: 472 ---ALISGPE---------TLHAQMTER--GHDKDINSVAVSPNDKLIATGSQDRLAKLW 517
Query: 388 NGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSN------FYCVVDMSCCMSLYSWSAD- 440
+ + VF GH ++ ++F + S+ + + D SC + A
Sbjct: 518 SCPDCSLLGVFTGHKRGIWCVQFSPVDQILATSSADGTLKLWGLQDFSCLKTFEGHDASV 577
Query: 441 ------SR--LLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKD 492
SR LLSG D LK+W I+T + + L GH D+++ + + + V + D
Sbjct: 578 LKIIFVSRGTQLLSGGSDGLLKLWTIKTNECVKTLDGHEDKIWGLHTNKQDDMVVTASSD 637
Query: 493 RVLKLW 498
+ LW
Sbjct: 638 SSITLW 643
Score = 162 (62.1 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 47/170 (27%), Positives = 76/170 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T GH + + SVA SP+ + +A+GS D +LW + + TGHK + C+ +S
Sbjct: 485 TERGHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVD 544
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ L + S G L+ W Q GH + I + V + +S DG
Sbjct: 545 QILATSSADGTLKLWGLQDFSCL-KTFEGHDASVLKIIF--VSRGT---QLLSGGSDGLL 598
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWG-----GDGVIYTGSQDCTIKVWE 267
++W + +CV L GH + WG D ++ T S D +I +W+
Sbjct: 599 KLWTIKTNECVKTLDGHEDKI----WGLHTNKQDDMVVTASSDSSITLWK 644
Score = 150 (57.9 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 89/382 (23%), Positives = 160/382 (41%)
Query: 118 PDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG-KHLVSGSKAGELQC 176
P+ ++ + S + + +D T + G+ + VL + + G H+V + + +L+
Sbjct: 312 PERNEIVTVSVEHNIVFYDAQTLQLRKQLAGYNDEVLDVKFLGPGDSHIVVATNSPQLKV 371
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
++ T L GH + I + L FVS +KD R+W ++ V+C+
Sbjct: 372 FELSTSHCQ--ILYGHTETILALDVFRKGL-----MFVSCAKDKSIRVWRMNKDGRVVCV 424
Query: 237 S---GHTL---AVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS 290
+ GH AV+C + + + T SQDCTIKVW + SL
Sbjct: 425 AQGLGHAHGVGAVSCSRLK-ESFVVTSSQDCTIKVWNIPE---------------SLTSK 468
Query: 291 TEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVS-GSDDFTMFLWE-PAV 348
+ AL +G + Q + K N + + ++L++ GS D LW P
Sbjct: 469 AKAALISGP-ETLHAQMTERGHDKDI-----NSVAVSPNDKLIATGSQDRLAKLWSCPDC 522
Query: 349 SKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
S TGH++ + V FSP Q +A++S D ++KLW + F GH V +I
Sbjct: 523 SLLGV--FTGHKRGIWCVQFSPVDQILATSSADGTLKLWGLQDFSCLKTFEGHDASVLKI 580
Query: 409 RFE-------------LIYCFRYPSNFYCVVDMSC----CMSLYSWSADSRLLLSGSKDS 451
F L+ + +N CV + L++ D ++++ S DS
Sbjct: 581 IFVSRGTQLLSGGSDGLLKLWTIKTN-ECVKTLDGHEDKIWGLHTNKQDD-MVVTASSDS 638
Query: 452 TLKVWDIRTQKLKQDLPGHADE 473
++ +W T+ +++ +E
Sbjct: 639 SITLWKDVTEIEQEEAQAKREE 660
Score = 126 (49.4 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 44/172 (25%), Positives = 72/172 (41%)
Query: 109 EAVLSVAFSPDGRQLASGSGDTTVRLWDL--NTQTPMFKCTGHKNWVLCIAWSADGKHLV 166
E + S SPD L +GS ++ W+ N +K H V + + + L
Sbjct: 68 EDITSFVLSPDDEVLVTGSRALLLKQWNWRENRCVRTWKAV-HIAPVATMVFDSTSTLLA 126
Query: 167 SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD 226
+G ++ WD + N L G + + + P + + S+S D RIWD
Sbjct: 127 TGGCDSTIKIWDMIKQYCTHN-LKGSSGVVHLVEFHP---DISRLQLFSSSMDYKIRIWD 182
Query: 227 VSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIREL 277
++ KCV L GH AVT + + DG + + +D VW + IR +
Sbjct: 183 LNSSKCVAVLDGHFSAVTSLAFTADGNTLISSGRDKICMVWNLKTRESIRTI 234
Score = 124 (48.7 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 37/142 (26%), Positives = 66/142 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPD-GR-QLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
C+ + G + V V F PD R QL S S D +R+WDLN+ + GH + V +A
Sbjct: 144 CTHNLKGSSGVVHLVEFHPDISRLQLFSSSMDYKIRIWDLNSSKCVAVLDGHFSAVTSLA 203
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI------SWEPVHLNAPCR 211
++ADG L+S + W+ +T + S + ++ + + + +
Sbjct: 204 FTADGNTLISSGRDKICMVWNLKT-RESIRTIPIYESVEAAVLLPEQGDFSQLGVKKQGL 262
Query: 212 RFVSASKDGDARIWDVSLRKCV 233
F++A G ++W+V+ CV
Sbjct: 263 HFLTAGSKGVLKVWEVATAACV 284
Score = 124 (48.7 bits), Expect = 0.00034, P = 0.00034
Identities = 50/211 (23%), Positives = 96/211 (45%)
Query: 88 PQA-VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC 146
PQ VF + + C + GHTE +L++ G S + D ++R+W +N + C
Sbjct: 367 PQLKVFELS-TSHCQI-LYGHTETILALDVFRKGLMFVSCAKDKSIRVWRMNKDGRVV-C 423
Query: 147 T----GHKNWVLCIAWSA-DGKHLVSGSKAGELQCWD-PQ--TGKPSGNPLSGHKKWITG 198
GH + V ++ S +V+ S+ ++ W+ P+ T K +SG +
Sbjct: 424 VAQGLGHAHGVGAVSCSRLKESFVVTSSQDCTIKVWNIPESLTSKAKAALISGPETLHAQ 483
Query: 199 ISWEPVH---LNA----PCRRFVSA-SKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG 250
++ E H +N+ P + ++ S+D A++W + +GH + CV++
Sbjct: 484 MT-ERGHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSP 542
Query: 251 -DGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
D ++ T S D T+K+W ++ +GH
Sbjct: 543 VDQILATSSADGTLKLWGLQDFSCLKTFEGH 573
Score = 109 (43.4 bits), Expect = 9.1e-19, Sum P(2) = 9.1e-19
Identities = 34/139 (24%), Positives = 60/139 (43%)
Query: 98 NRCSATI-AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI 156
NRC T A H V ++ F LA+G D+T+++WD+ Q G V +
Sbjct: 99 NRCVRTWKAVHIAPVATMVFDSTSTLLATGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLV 158
Query: 157 AWSADGKHL--VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+ D L S S +++ WD + K L GH +T +++ A +
Sbjct: 159 EFHPDISRLQLFSSSMDYKIRIWDLNSSKCVA-VLDGHFSAVTSLAF-----TADGNTLI 212
Query: 215 SASKDGDARIWDVSLRKCV 233
S+ +D +W++ R+ +
Sbjct: 213 SSGRDKICMVWNLKTRESI 231
Score = 51 (23.0 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 11/41 (26%), Positives = 24/41 (58%)
Query: 444 LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGE 484
+++ S + + +D +T +L++ L G+ DEV V + G+
Sbjct: 317 IVTVSVEHNIVFYDAQTLQLRKQLAGYNDEVLDVKFLGPGD 357
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 269 (99.8 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 66/204 (32%), Positives = 103/204 (50%)
Query: 104 IAGHTEAVLSVAFSPD-GRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H+ V S+ GR LA+G D V +W +N + TGH + + SA
Sbjct: 16 IVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S D D
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLLGHKANICSLDFHPYG------SFVASGSLDTD 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WDV + C+ HT AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGH 188
Query: 281 GHWVNSLALS-TEYALRTGAFDHT 303
VN + +EY L +G+ D T
Sbjct: 189 SGPVNVVEFHPSEYLLASGSSDRT 212
Score = 213 (80.0 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 57/202 (28%), Positives = 91/202 (45%)
Query: 71 LEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSA--TIAGHTEAVLSVAFSPDGRQLASGSG 128
+E ++S ++ L + R+ + T+ GH + S+ F P G +ASGS
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 129 DTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNP 188
DT ++LWD+ + +FK H V C+ +S DGK L S + ++ WD GK
Sbjct: 126 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFE- 184
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+GH + + + P S S D R WD+ V C+ V C+ +
Sbjct: 185 FTGHSGPVNVVEFHPSEY-----LLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILF 239
Query: 249 GGDGV-IYTGSQDCTIKV--WE 267
DG +Y G QD +++V WE
Sbjct: 240 NPDGCCLYGGFQD-SLRVYGWE 260
Score = 181 (68.8 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 59/218 (27%), Positives = 96/218 (44%)
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETT 269
R + D +W V+ CV+ L+GHT + ++ + +I GSQ +I+VW+
Sbjct: 34 RLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLE 93
Query: 270 QGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYN------ 322
K++R L GH + SL + + +G+ D K + + +K + +Y
Sbjct: 94 AAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLW---DVRRKGCIFKYKSHTQAV 150
Query: 323 KIKGNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF 380
+ +P+ L S +DD T+ LW+ K TGH VN V F P +AS S
Sbjct: 151 RCLRFSPDGKWLASAADDHTVKLWDLTAGKV-MFEFTGHSGPVNVVEFHPSEYLLASGSS 209
Query: 381 DKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRY 418
D++I+ W+ V+ PV I F C Y
Sbjct: 210 DRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLY 247
Score = 165 (63.1 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 49/232 (21%), Positives = 102/232 (43%)
Query: 97 VNR--CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
VN+ C ++ GHT + S+ S + +GS ++R+WDL + GHK +
Sbjct: 50 VNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANIC 109
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+ + G + SGS +++ WD + K H + + + + P +
Sbjct: 110 SLDFHPYGSFVASGSLDTDIKLWDVRR-KGCIFKYKSHTQAVRCLRFSP-----DGKWLA 163
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETTQGKL 273
SA+ D ++WD++ K + +GH+ V V++ + ++ +GS D TI+ W+ + +
Sbjct: 164 SAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHV 223
Query: 274 IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERYNKI 324
+ ++ V + + + G F + + Y PE + + K+
Sbjct: 224 VSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWEPERCFDVVVVNWGKV 275
Score = 146 (56.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 45/192 (23%), Positives = 83/192 (43%)
Query: 324 IKGNAPERLVS-GSDDFTMFLWEPAVSKQPKTR-MTGHQQLVNHVYFSPDGQWVASASFD 381
+ G + RL++ G DD + +W +V+K +TGH + + S + + + S
Sbjct: 27 VLGKSTGRLLATGGDDCRVNVW--SVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQS 84
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDM-----SCCMSLYS 436
SI++W+ K + GH + + F F + + + C+ Y
Sbjct: 85 GSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYK 144
Query: 437 ----------WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKV 486
+S D + L S + D T+K+WD+ K+ + GH+ V V++ P +
Sbjct: 145 SHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLL 204
Query: 487 ASGGKDRVLKLW 498
ASG DR ++ W
Sbjct: 205 ASGSSDRTIRFW 216
Score = 121 (47.7 bits), Expect = 0.00055, P = 0.00055
Identities = 44/178 (24%), Positives = 81/178 (45%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
E +V+GS ++ +W+ +K +T + GH+ + + F P G +VAS S D IKLW+
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRT-LLGHKANICSLDFHPYGSFVASGSLDTDIKLWDV 134
Query: 390 TTGKFVAVFRGHVGPVYQIRFELI-YCFRYPSNFYCVV--DMSCCMSLYSWSADSR---- 442
+ ++ H V +RF ++ + V D++ ++ ++ S
Sbjct: 135 RRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNV 194
Query: 443 --------LLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKD 492
LL SGS D T++ WD+ + + A V + ++PDG + G +D
Sbjct: 195 VEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQD 252
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 266 (98.7 bits), Expect = 3.1e-20, P = 3.1e-20
Identities = 70/248 (28%), Positives = 117/248 (47%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I+GHT V ++A A+GS D T+++WDL + TGH + + + S+
Sbjct: 203 ISGHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEVSSRHP 262
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+L S + ++ CWD ++ K N GH++ + ++ P L+ S +D R
Sbjct: 263 YLFSVGEDNKVLCWDLESNKQVRN-YYGHRQGVYSVALHPT-LDV----LFSGGRDNCVR 316
Query: 224 IWDVSLRKCVICLSGHTLAVTCVK-WGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
+WD+ R + + GH + +K D + +GS D T+K+W+ G L H
Sbjct: 317 VWDMRTRANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAATLTNHKK 376
Query: 283 WVNSLAL-STEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG----NAPERLVSGSD 337
V S+ + EY+ TGA D+ KQ+ P+ L +N I NA LVSG D
Sbjct: 377 GVRSMVIHEKEYSFATGAADNI-KQWKCPDGSFIKNLSGHNSIINAMALNADNVLVSGGD 435
Query: 338 DFTMFLWE 345
+ ++ W+
Sbjct: 436 NGSISFWD 443
Score = 195 (73.7 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 60/210 (28%), Positives = 97/210 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI-AWSADGKH 164
GH + V SVA P L SG D VR+WD+ T+ +F+ GHK +L + + +AD +
Sbjct: 289 GHRQGVYSVALHPTLDVLFSGGRDNCVRVWDMRTRANIFEMKGHKGTILSLKSQNADPQ- 347
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
++SGS ++ WD TG S L+ HKK G+ +H F + + D + +
Sbjct: 348 VISGSMDTTVKLWDLATGT-SAATLTNHKK---GVRSMVIHEKE--YSFATGAAD-NIKQ 400
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
W + LSGH + + D V+ +G + +I W+ G ++ + V
Sbjct: 401 WKCPDGSFIKNLSGHNSIINAMALNADNVLVSGGDNGSISFWDWKTGYCFQKTQSI---V 457
Query: 285 NSLALSTEYALRTGAFDHTGKQYSSPEEMK 314
+L E + AFD TG + + E K
Sbjct: 458 QPGSLEGEAGIFDMAFDKTGSRLITCEADK 487
Score = 176 (67.0 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 53/197 (26%), Positives = 87/197 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH A+ + S L S D V WDL + + GH+ V +A
Sbjct: 244 TLTGHVSAIRGLEVSSRHPYLFSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTL 303
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
L SG + ++ WD +T + + + GHK I + + NA + +S S D
Sbjct: 304 DVLFSGGRDNCVRVWDMRT-RANIFEMKGHKGTILSLKSQ----NAD-PQVISGSMDTTV 357
Query: 223 RIWDVSLRKCVICLSGHTLAV-TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHG 281
++WD++ L+ H V + V + TG+ D IK W+ G I+ L GH
Sbjct: 358 KLWDLATGTSAATLTNHKKGVRSMVIHEKEYSFATGAAD-NIKQWKCPDGSFIKNLSGHN 416
Query: 282 HWVNSLALSTEYALRTG 298
+N++AL+ + L +G
Sbjct: 417 SIINAMALNADNVLVSG 433
Score = 164 (62.8 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 52/220 (23%), Positives = 97/220 (44%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
+SGH W+ I+ + + F + S D ++WD++ + + L+GH A+ ++
Sbjct: 203 ISGHTGWVRAIAVDKSN-----EWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEV 257
Query: 249 GG-DGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
+++ +D + W+ K +R GH V S+AL T L +G D+ +
Sbjct: 258 SSRHPYLFSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRV 317
Query: 307 YSSPEEMKKAALERYN----KIKG-NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ ++ + +K NA +++SGS D T+ LW+ A T +T H++
Sbjct: 318 WDMRTRANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAAT-LTNHKK 376
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
V + A+ + D +IK W G F+ GH
Sbjct: 377 GVRSMVIHEKEYSFATGAAD-NIKQWKCPDGSFIKNLSGH 415
Score = 138 (53.6 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 39/158 (24%), Positives = 69/158 (43%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR------ 409
++GH V + +W A+ S D +IK+W+ +G+ GHV + +
Sbjct: 203 ISGHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEVSSRHP 262
Query: 410 --FEL-----IYCFRYPSNFYCVVDMSCCMSLYSWSADSRL--LLSGSKDSTLKVWDIRT 460
F + + C+ SN +YS + L L SG +D+ ++VWD+RT
Sbjct: 263 YLFSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRVWDMRT 322
Query: 461 QKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+ ++ GH + ++ +V SG D +KLW
Sbjct: 323 RANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLW 360
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 47/185 (25%), Positives = 82/185 (44%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
E +GS D T+ +W+ A S + K +TGH + + S ++ S D + W+
Sbjct: 220 EWFATGSTDNTIKVWDLA-SGELKVTLTGHVSAIRGLEVSSRHPYLFSVGEDNKVLCWDL 278
Query: 390 TTGKFVAVFRGHVGPVYQIRF----ELIY------CFRY-----PSNFYCVVD-MSCCMS 433
+ K V + GH VY + ++++ C R +N + + +S
Sbjct: 279 ESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRVWDMRTRANIFEMKGHKGTILS 338
Query: 434 LYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 493
L S +AD +++ SGS D+T+K+WD+ T L H V ++ A+G D
Sbjct: 339 LKSQNADPQVI-SGSMDTTVKLWDLATGTSAATLTNHKKGVRSMVIHEKEYSFATGAADN 397
Query: 494 VLKLW 498
+ K W
Sbjct: 398 I-KQW 401
Score = 122 (48.0 bits), Expect = 0.00031, P = 0.00031
Identities = 39/145 (26%), Positives = 68/145 (46%)
Query: 272 KLIRELKGHGHWVNSLAL--STEYALRTGAFDHTGKQYS-SPEEMKKAALERYNKIKG-N 327
KL+R + GH WV ++A+ S E+ TG+ D+T K + + E+K + I+G
Sbjct: 198 KLMRVISGHTGWVRAIAVDKSNEW-FATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLE 256
Query: 328 APER---LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
R L S +D + W+ +KQ + GH+Q V V P + S D +
Sbjct: 257 VSSRHPYLFSVGEDNKVLCWDLESNKQVRNYY-GHRQGVYSVALHPTLDVLFSGGRDNCV 315
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQIR 409
++W+ T + +GH G + ++
Sbjct: 316 RVWDMRTRANIFEMKGHKGTILSLK 340
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 227 (85.0 bits), Expect = 5.4e-20, Sum P(2) = 5.4e-20
Identities = 58/203 (28%), Positives = 92/203 (45%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT-GHKNWVLCIAWSAD 161
T+ GHT+AV +A G+QL S S D +++LWD K GH++ V + +
Sbjct: 143 TLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPT 202
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
G ++S S+ ++ WD TG GH W+ + ++ F SAS D
Sbjct: 203 GDFVLSASRDHTIKQWDISTGY-CVYTFRGHNDWV-----RMIRISNDGTLFASASLDQT 256
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGD-------G---------VIYTGSQDCTIKV 265
+W + + + L H AV CV+W D G ++++GS+D +IK
Sbjct: 257 VTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKA 316
Query: 266 WETTQGKLIRELKGHGHWVNSLA 288
W G ++ L H +WV LA
Sbjct: 317 WNINTGDVLFTLLAHENWVRGLA 339
Score = 205 (77.2 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 65/207 (31%), Positives = 95/207 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH + V F P +AS S D T+++WD T GH + V IA A GK
Sbjct: 102 LTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGK 161
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGDA 222
LVS S ++ WD L GH+ ++ +++ P FV SAS+D
Sbjct: 162 QLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTF------LPTGDFVLSASRDHTI 215
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWE--TTQGKLIRELKG 279
+ WD+S CV GH V ++ DG ++ + S D T+ VW T KL+ L+
Sbjct: 216 KQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLV--LRD 273
Query: 280 HGHWVNSLALSTEYALRTGAFDHTGKQ 306
H H V + E+A T + TG+Q
Sbjct: 274 HEHAVECV----EWAPDTAYTNVTGQQ 296
Score = 199 (75.1 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 56/218 (25%), Positives = 100/218 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C ++ GH V SV F P G + S S D T++ WD++T ++ GH +WV I S
Sbjct: 183 CLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRIS 242
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP--VHLNAPCRR----- 212
DG S S + W T K + L H+ + + W P + N ++
Sbjct: 243 NDGTLFASASLDQTVTVWSFAT-KSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNS 301
Query: 213 ---FVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWET 268
S S+D + W+++ + L H V + + G + + + D T++VWE
Sbjct: 302 THILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWEL 361
Query: 269 TQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+ + ++ ++ H H+V+++A T + TG+ D + K
Sbjct: 362 SAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCK 399
Score = 198 (74.8 bits), Expect = 7.2e-13, P = 7.2e-13
Identities = 73/271 (26%), Positives = 118/271 (43%)
Query: 236 LSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-Y 293
L+GH L +T V + I S+D TIKVW+ G+L R LKGH VN +A+
Sbjct: 102 LTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGK 161
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYNKIKGNA--P--ERLVSGSDDFTMFLWEPA 347
L + + D + K + + K+ + + P + ++S S D T+ W+ +
Sbjct: 162 QLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDIS 221
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
T GH V + S DG ASAS D+++ +W+ T V R H V
Sbjct: 222 TGYCVYT-FRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVEC 280
Query: 408 IRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDL 467
+ + P Y V + +L SGS+D ++K W+I T + L
Sbjct: 281 VEWA-------PDTAYTNVT-----GQQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTL 328
Query: 468 PGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
H + V + + P G+ + S D+ L++W
Sbjct: 329 LAHENWVRGLAFHPKGKYLISVADDKTLRVW 359
Score = 184 (69.8 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 87/336 (25%), Positives = 138/336 (41%)
Query: 145 KCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV 204
K TGH+ + + + + S S+ ++ WD +TG+ L GH + I+
Sbjct: 101 KLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLE-RTLKGHTDAVNDIA---- 155
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLR-KCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
++A ++ VS S D ++WD C+ L GH V+ V + GD V+ + S+D
Sbjct: 156 -IDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVL-SASRDH 213
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGA-FDHTGKQYSSPEEMKKAALER 320
TIK W+ + G + +GH WV + +S + L A D T +S + K L
Sbjct: 214 TIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRD 273
Query: 321 YNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN--HVYFSPDGQWVASA 378
+ E V + W P + T +TG Q N H+ FS
Sbjct: 274 H--------EHAVECVE------WAPDTAY---TNVTGQQPEGNSTHILFS--------G 308
Query: 379 SFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELI--YCFRYPSNFYCVV-DMSC--CM- 432
S D+SIK WN TG + H V + F Y + V ++S CM
Sbjct: 309 SRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRCMK 368
Query: 433 ---------SLYSWSADSRLLLSGSKDSTLKVWDIR 459
S ++ S +++GS D + KVW+ R
Sbjct: 369 AIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWECR 404
Score = 151 (58.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 53/203 (26%), Positives = 85/203 (41%)
Query: 312 EMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPD 371
+++ E +I AP R + D W P + K +TGH+ + V F P
Sbjct: 65 DLESKLQESQREINHGAPTRDKRQAAD-----WIPRPPETQK--LTGHRLPITRVIFHPL 117
Query: 372 GQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----LIYC--------FRY 418
+AS S D +IK+W+ TG+ +GH V I + L+ C + +
Sbjct: 118 WTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDF 177
Query: 419 PSNFYCVVDMSC---CMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVF 475
+ C+ + +S ++ +LS S+D T+K WDI T GH D V
Sbjct: 178 GQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVR 237
Query: 476 AVDWSPDGEKVASGGKDRVLKLW 498
+ S DG AS D+ + +W
Sbjct: 238 MIRISNDGTLFASASLDQTVTVW 260
Score = 76 (31.8 bits), Expect = 5.4e-20, Sum P(2) = 5.4e-20
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 442 RLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+ L+S + D TL+VW++ Q+ + + H V V + V +G D K+W
Sbjct: 345 KYLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVW 401
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 222 (83.2 bits), Expect = 6.3e-20, Sum P(2) = 6.3e-20
Identities = 59/202 (29%), Positives = 98/202 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D +RLWDL + GH VL +A+S D +
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNR 118
Query: 164 HLVSGSKAGELQCWDP--QTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+VS S+ ++ W+ + GH+ W++ + + P L P VSAS D
Sbjct: 119 QIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQ-PT--IVSASWDKT 175
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGH 280
++W++S K L+GHT V+ V DG + +G +D + +W+ +GK + L+ +
Sbjct: 176 VKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN 235
Query: 281 GHWVNSLALSTEYALRTGAFDH 302
+++L S A +H
Sbjct: 236 SV-IHALCFSPNRYWLCAATEH 256
Score = 222 (83.2 bits), Expect = 6.3e-20, Sum P(2) = 6.3e-20
Identities = 70/231 (30%), Positives = 117/231 (50%)
Query: 103 TIAGHTEAVLSVAFSPDGRQL-ASGSGDTTVRLWDLNTQTPMF-----KCTGHKNWVLCI 156
T+ HT+ V ++A D + S S D ++ LW L + + TGH ++V +
Sbjct: 10 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDV 69
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
S+DG+ +SGS GEL+ WD G S GH K + +++ L+ R+ VSA
Sbjct: 70 VLSSDGQFALSGSWDGELRLWDLAAGV-STRRFVGHTKDVLSVAFS---LDN--RQIVSA 123
Query: 217 SKDGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGV---IYTGSQDCTIKVWETT 269
S+D ++W+ +L +C +S GH V+CV++ + + I + S D T+KVW +
Sbjct: 124 SRDRTIKLWN-TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLS 182
Query: 270 QGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALE 319
KL L GH +V+++A+S + +L +G D + E K +LE
Sbjct: 183 NCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE 233
Score = 166 (63.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 85/333 (25%), Positives = 144/333 (43%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW-----DVSLRKCVICLSGHTLAV 243
+ H +T I+ P+ NA VSAS+D +W D + L+GH+ V
Sbjct: 11 MRAHTDMVTAIA-TPID-NADI--IVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
V DG +GS D +++W+ G R GH V S+A S + + + + D
Sbjct: 67 EDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRD 126
Query: 302 HTGKQYSSPEEMKKAALERYN---------KIKGNAPE-RLVSGSDDFTMFLWEPAVSKQ 351
T K +++ E K E + N + +VS S D T+ +W + K
Sbjct: 127 RTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL 186
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE 411
T + GH V+ V SPDG AS D + LW+ GK + + ++ +
Sbjct: 187 RST-LAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN-SVIHAL--- 241
Query: 412 LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHA 471
CF P+ ++ + + W +S+ ++ +D LKV D++ + K D G A
Sbjct: 242 ---CFS-PNRYWLCAATEHGIKI--WDLESKSIV---ED--LKV-DLKAEAEKADNSGPA 289
Query: 472 DE----VF--AVDWSPDGEKVASGGKDRVLKLW 498
++ +++WS DG + SG D V+++W
Sbjct: 290 ATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVW 322
Score = 106 (42.4 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
+T+AGHT V +VA SPDG ASG D V LWDL ++ + + + + +S +
Sbjct: 188 STLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN-SVIHALCFSPN 246
Query: 162 GKHLVSGSKAGELQCWD 178
L + ++ G ++ WD
Sbjct: 247 RYWLCAATEHG-IKIWD 262
Score = 70 (29.7 bits), Expect = 6.3e-20, Sum P(2) = 6.3e-20
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKVWDI 458
C SL +WSAD L SG D ++VW I
Sbjct: 298 CTSL-NWSADGSTLFSGYTDGVIRVWGI 324
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 262 (97.3 bits), Expect = 6.7e-20, P = 6.7e-20
Identities = 81/293 (27%), Positives = 135/293 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH A+ SV FSP G+QLA+ S DT + LW+ Q F+ GHK+ V + +S G L
Sbjct: 16 GHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGNLL 75
Query: 166 VSGSKAGELQCWDP-QTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
S S+ ++ W P + GK S H + + + +A + +AS+D ++
Sbjct: 76 ASASRDRTVRLWIPDKRGKSS--EFKAHTAPVRSVDF-----SADGQFLATASEDKSIKV 128
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
W++ ++ + L HT V C K+ DG +I + S+D TIK+W+TT + + +
Sbjct: 129 WNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 284 VNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA------PER--LVS 334
N + + + + DHT K + + K L+ Y G P +++
Sbjct: 189 ANFVDFNPNGTCIASAGSDHTVKIWDI--RVNKL-LQHYQVHSGGVNCVSFHPSGNYIIT 245
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GH V V FS G+ +S D + LW
Sbjct: 246 ASSDGTLKILDLLEGRLIYT-LQGHTGPVFTVSFSKGGELFSSGGADTQVLLW 297
Score = 249 (92.7 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 70/228 (30%), Positives = 111/228 (48%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S+ HT V SV FS DG+ LA+ S D ++++W++ Q ++ H +WV C +S
Sbjct: 95 SSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSP 154
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S+ ++ WD T K N S + + + P N C SA D
Sbjct: 155 DGRLIVSCSEDKTIKIWDT-TNKQCVNNFSDSVGFANFVDFNP---NGTC--IASAGSDH 208
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
+IWD+ + K + H+ V CV + G I T S D T+K+ + +G+LI L+G
Sbjct: 209 TVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQG 268
Query: 280 HGHWVNSLALSTEYAL-RTGAFD------HTGKQYSSPEEMKKAALER 320
H V +++ S L +G D T Y + ++M K L+R
Sbjct: 269 HTGPVFTVSFSKGGELFSSGGADTQVLLWRTNFDYLNCKDMIKRNLKR 316
Score = 191 (72.3 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 63/189 (33%), Positives = 94/189 (49%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKT-RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW- 387
++L + S D + LW Q + R GH+ +V V FSP G +ASAS D++++LW
Sbjct: 31 KQLATASWDTFLMLWN--CKPQARAFRYVGHKDVVTSVQFSPLGNLLASASRDRTVRLWI 88
Query: 388 NGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSN---FYCVVDMSCCMSLYS------W- 437
GK + F+ H PV + F F ++ V +M LYS W
Sbjct: 89 PDKRGKS-SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWV 147
Query: 438 -----SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEV-FA--VDWSPDGEKVASG 489
S D RL++S S+D T+K+WD KQ + +D V FA VD++P+G +AS
Sbjct: 148 RCAKFSPDGRLIVSCSEDKTIKIWDTTN---KQCVNNFSDSVGFANFVDFNPNGTCIASA 204
Query: 490 GKDRVLKLW 498
G D +K+W
Sbjct: 205 GSDHTVKIW 213
Score = 152 (58.6 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 50/182 (27%), Positives = 81/182 (44%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L + S+D ++ +W ++ + H V FSPDG+ + S S DK+IK+W+ T
Sbjct: 117 LATASEDKSIKVWN-MYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN 175
Query: 392 GKFVAVFRGHVGPVYQIRFELI-YCFRYPSNFYCV----VDMSCCMSLY----------S 436
+ V F VG + F C + + V + ++ + Y S
Sbjct: 176 KQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVS 235
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+ +++ S D TLK+ D+ +L L GH VF V +S GE +SGG D +
Sbjct: 236 FHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVL 295
Query: 497 LW 498
LW
Sbjct: 296 LW 297
Score = 147 (56.8 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 43/156 (27%), Positives = 71/156 (45%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----L 412
GH+ + V FSP G+ +A+AS+D + LWN + GH V ++F L
Sbjct: 16 GHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGNLL 75
Query: 413 IYCFRYPSNFYCVVDMSCCMSLYS----------WSADSRLLLSGSKDSTLKVWDIRTQK 462
R + + D S + +SAD + L + S+D ++KVW++ Q+
Sbjct: 76 ASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQR 135
Query: 463 LKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L H V +SPDG + S +D+ +K+W
Sbjct: 136 FLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 264 (98.0 bits), Expect = 7.6e-20, P = 7.6e-20
Identities = 83/304 (27%), Positives = 147/304 (48%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
SA + GH + V++ D L +GS D T+++W ++ M+ GH V S
Sbjct: 248 SAVLRGHEDHVITCMQIHDD-VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQ 306
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
G+++VSGS ++ W G + L GH + ++ L V+ S+D
Sbjct: 307 CGRYIVSGSTDRTVKVWSTVDGSLL-HTLQGHTSTVRCMAMAGSIL-------VTGSRDT 358
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
R+WDV + + L GH AV CV++ G V+ +G D T+K+W G+ IR L GH
Sbjct: 359 TLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVV-SGGYDFTVKIWNAHTGRCIRTLTGH 417
Query: 281 GHWVNSLALSTEYALR-TGAFDHTGK--QYSSPEEMKKAAL-ERYNKIKGNAPER---LV 333
+ V SL +E ++ +G+ D + + ++ PE + AL + + + R LV
Sbjct: 418 NNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNILV 477
Query: 334 SGSDDFTMFLWEPAVSKQPKTRM-TGHQQLVNHV-YFSPDGQWVASASFDKSIKLWNGTT 391
S + D + +W+ + + M +GH+ + + +F + VA++S D ++KLW+
Sbjct: 478 SCNADSHVRVWD--IHEGTCVHMLSGHRSAITSLQWFGRN--MVATSSDDGTVKLWDIER 533
Query: 392 GKFV 395
G +
Sbjct: 534 GALI 537
Score = 249 (92.7 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 69/212 (32%), Positives = 106/212 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
AT+ GH AV V F DG + SG D TV++W+ +T + TGH N V + + ++
Sbjct: 372 ATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESE 429
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNP----LSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+ SGS ++ WD +P G L GH +G+ + N VS +
Sbjct: 430 RSIVCSGSLDTSIRVWD--FTRPEGQECVALLQGHTSLTSGMQ---LRGNI----LVSCN 480
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIREL 277
D R+WD+ CV LSGH A+T ++W G ++ T S D T+K+W+ +G LIR+L
Sbjct: 481 ADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLWDIERGALIRDL 540
Query: 278 K-----GHGHWVNSL-ALSTEYALRTGAFDHT 303
G+G + L + ST A G+ ++T
Sbjct: 541 VTLDSGGNGGCIWRLCSTSTMLACAVGSRNNT 572
Score = 200 (75.5 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 66/237 (27%), Positives = 102/237 (43%)
Query: 281 GHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYN---KIKGNAPERLVSGSD 337
G W + ++ Y + +G+ D T K +S+ + L+ + + A LV+GS
Sbjct: 298 GVWTSQISQCGRYIV-SGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSR 356
Query: 338 DFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAV 397
D T+ +W+ + T + GH V V F DG V S +D ++K+WN TG+ +
Sbjct: 357 DTTLRVWDVESGRHLAT-LHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRT 413
Query: 398 FRGHVGPVYQIRFEL---IYC------------FRYPSNFYCVVDMSCCMSLYS-WSADS 441
GH VY + FE I C F P CV + SL S
Sbjct: 414 LTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRG 473
Query: 442 RLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+L+S + DS ++VWDI L GH + ++ W VA+ D +KLW
Sbjct: 474 NILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWF-GRNMVATSSDDGTVKLW 529
Score = 173 (66.0 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 70/238 (29%), Positives = 110/238 (46%)
Query: 254 IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL--------STEYALRTGAFDHTGK 305
I +GS D T+KVW T G L+ L+GH V +A+ S + LR +D
Sbjct: 311 IVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRV--WDVESG 368
Query: 306 QYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNH 365
++ + AA+ R + G +VSG DFT+ +W + +T +TGH V
Sbjct: 369 RHLATLHGHHAAV-RCVQFDGTT---VVSGGYDFTVKIWNAHTGRCIRT-LTGHNNRVYS 423
Query: 366 VYFSPDGQWVASASFDKSIKLWNGTT--GK-FVAVFRGHVGPV--YQIRFELIYCFRYPS 420
+ F + V S S D SI++W+ T G+ VA+ +GH Q+R ++ S
Sbjct: 424 LLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNILVSCNADS 483
Query: 421 NFYCVVDM--SCCMSLYSW--SADSRL-------LLSGSKDSTLKVWDIRTQKLKQDL 467
+ V D+ C+ + S SA + L + + S D T+K+WDI L +DL
Sbjct: 484 HVR-VWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLWDIERGALIRDL 540
Score = 147 (56.8 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 41/133 (30%), Positives = 64/133 (48%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT----GHKNWVL 154
RC T+ GH V S+ F + + SGS DT++R+WD T+ +C GH + L
Sbjct: 409 RCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDF-TRPEGQECVALLQGHTS--L 465
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
G LVS + ++ WD G + LSGH+ IT + W ++ A
Sbjct: 466 TSGMQLRGNILVSCNADSHVRVWDIHEGT-CVHMLSGHRSAITSLQWFGRNMVA------ 518
Query: 215 SASKDGDARIWDV 227
++S DG ++WD+
Sbjct: 519 TSSDDGTVKLWDI 531
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 45/179 (25%), Positives = 83/179 (46%)
Query: 332 LVSGSDDFTMFLWEPAVSK-QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGT 390
LV+GSDD T+ +W + K + + GH V S G+++ S S D+++K+W+
Sbjct: 269 LVTGSDDNTLKVW--CIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTV 326
Query: 391 TGKFVAVFRGHVGPVYQIRFE---LIYCFRYPS-NFYCVVDMSCCMSLYSWSA------- 439
G + +GH V + L+ R + + V +L+ A
Sbjct: 327 DGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF 386
Query: 440 DSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
D ++SG D T+K+W+ T + + L GH + V+++ + + V SG D +++W
Sbjct: 387 DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVW 445
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 264 (98.0 bits), Expect = 7.6e-20, P = 7.6e-20
Identities = 83/304 (27%), Positives = 147/304 (48%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
SA + GH + V++ D L +GS D T+++W ++ M+ GH V S
Sbjct: 248 SAVLRGHEDHVITCMQIHDD-VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQ 306
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
G+++VSGS ++ W G + L GH + ++ L V+ S+D
Sbjct: 307 CGRYIVSGSTDRTVKVWSTVDGSLL-HTLQGHTSTVRCMAMAGSIL-------VTGSRDT 358
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
R+WDV + + L GH AV CV++ G V+ +G D T+K+W G+ IR L GH
Sbjct: 359 TLRVWDVESGRHLATLHGHHAAVRCVQFDGTTVV-SGGYDFTVKIWNAHTGRCIRTLTGH 417
Query: 281 GHWVNSLALSTEYALR-TGAFDHTGK--QYSSPEEMKKAAL-ERYNKIKGNAPER---LV 333
+ V SL +E ++ +G+ D + + ++ PE + AL + + + R LV
Sbjct: 418 NNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNILV 477
Query: 334 SGSDDFTMFLWEPAVSKQPKTRM-TGHQQLVNHV-YFSPDGQWVASASFDKSIKLWNGTT 391
S + D + +W+ + + M +GH+ + + +F + VA++S D ++KLW+
Sbjct: 478 SCNADSHVRVWD--IHEGTCVHMLSGHRSAITSLQWFGRN--MVATSSDDGTVKLWDIER 533
Query: 392 GKFV 395
G +
Sbjct: 534 GALI 537
Score = 249 (92.7 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 69/212 (32%), Positives = 106/212 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
AT+ GH AV V F DG + SG D TV++W+ +T + TGH N V + + ++
Sbjct: 372 ATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESE 429
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNP----LSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+ SGS ++ WD +P G L GH +G+ + N VS +
Sbjct: 430 RSIVCSGSLDTSIRVWD--FTRPEGQECVALLQGHTSLTSGMQ---LRGNI----LVSCN 480
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIREL 277
D R+WD+ CV LSGH A+T ++W G ++ T S D T+K+W+ +G LIR+L
Sbjct: 481 ADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLWDIERGALIRDL 540
Query: 278 K-----GHGHWVNSL-ALSTEYALRTGAFDHT 303
G+G + L + ST A G+ ++T
Sbjct: 541 VTLDSGGNGGCIWRLCSTSTMLACAVGSRNNT 572
Score = 200 (75.5 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 66/237 (27%), Positives = 102/237 (43%)
Query: 281 GHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYN---KIKGNAPERLVSGSD 337
G W + ++ Y + +G+ D T K +S+ + L+ + + A LV+GS
Sbjct: 298 GVWTSQISQCGRYIV-SGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSR 356
Query: 338 DFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAV 397
D T+ +W+ + T + GH V V F DG V S +D ++K+WN TG+ +
Sbjct: 357 DTTLRVWDVESGRHLAT-LHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRT 413
Query: 398 FRGHVGPVYQIRFEL---IYC------------FRYPSNFYCVVDMSCCMSLYS-WSADS 441
GH VY + FE I C F P CV + SL S
Sbjct: 414 LTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRG 473
Query: 442 RLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+L+S + DS ++VWDI L GH + ++ W VA+ D +KLW
Sbjct: 474 NILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWF-GRNMVATSSDDGTVKLW 529
Score = 173 (66.0 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 70/238 (29%), Positives = 110/238 (46%)
Query: 254 IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL--------STEYALRTGAFDHTGK 305
I +GS D T+KVW T G L+ L+GH V +A+ S + LR +D
Sbjct: 311 IVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRV--WDVESG 368
Query: 306 QYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNH 365
++ + AA+ R + G +VSG DFT+ +W + +T +TGH V
Sbjct: 369 RHLATLHGHHAAV-RCVQFDGTT---VVSGGYDFTVKIWNAHTGRCIRT-LTGHNNRVYS 423
Query: 366 VYFSPDGQWVASASFDKSIKLWNGTT--GK-FVAVFRGHVGPV--YQIRFELIYCFRYPS 420
+ F + V S S D SI++W+ T G+ VA+ +GH Q+R ++ S
Sbjct: 424 LLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNILVSCNADS 483
Query: 421 NFYCVVDM--SCCMSLYSW--SADSRL-------LLSGSKDSTLKVWDIRTQKLKQDL 467
+ V D+ C+ + S SA + L + + S D T+K+WDI L +DL
Sbjct: 484 HVR-VWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLWDIERGALIRDL 540
Score = 147 (56.8 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 41/133 (30%), Positives = 64/133 (48%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT----GHKNWVL 154
RC T+ GH V S+ F + + SGS DT++R+WD T+ +C GH + L
Sbjct: 409 RCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDF-TRPEGQECVALLQGHTS--L 465
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
G LVS + ++ WD G + LSGH+ IT + W ++ A
Sbjct: 466 TSGMQLRGNILVSCNADSHVRVWDIHEGT-CVHMLSGHRSAITSLQWFGRNMVA------ 518
Query: 215 SASKDGDARIWDV 227
++S DG ++WD+
Sbjct: 519 TSSDDGTVKLWDI 531
Score = 145 (56.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 45/179 (25%), Positives = 83/179 (46%)
Query: 332 LVSGSDDFTMFLWEPAVSK-QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGT 390
LV+GSDD T+ +W + K + + GH V S G+++ S S D+++K+W+
Sbjct: 269 LVTGSDDNTLKVW--CIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTV 326
Query: 391 TGKFVAVFRGHVGPVYQIRFE---LIYCFRYPS-NFYCVVDMSCCMSLYSWSA------- 439
G + +GH V + L+ R + + V +L+ A
Sbjct: 327 DGSLLHTLQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF 386
Query: 440 DSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
D ++SG D T+K+W+ T + + L GH + V+++ + + V SG D +++W
Sbjct: 387 DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVW 445
>WB|WBGene00007972 [details] [associations]
symbol:prp-4 species:6239 "Caenorhabditis elegans"
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:Z80215
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR027106 PANTHER:PTHR19846
GO:GO:0001703 InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR PIR:T19776
RefSeq:NP_492363.1 HSSP:O43172 ProteinModelPortal:Q93339 SMR:Q93339
DIP:DIP-26822N IntAct:Q93339 MINT:MINT-1102466 STRING:Q93339
PaxDb:Q93339 EnsemblMetazoa:C36B1.5.1 EnsemblMetazoa:C36B1.5.2
GeneID:183250 KEGG:cel:CELE_C36B1.5 UCSC:C36B1.5.1 CTD:183250
WormBase:C36B1.5 InParanoid:Q93339 NextBio:920460 Uniprot:Q93339
Length = 496
Score = 260 (96.6 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 79/309 (25%), Positives = 142/309 (45%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
++ +N ++ +A T V FS D + + +V +W K GH +
Sbjct: 191 VQQINLHASQVAD-TRPVAFCEFSADSEHIVTAGWSGSVAVWKREQCAQEIKFIGHSSQA 249
Query: 154 LCI-----AWSAD---GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
C A++ + ++VS S G + W P G L H + ++ +++ P
Sbjct: 250 GCARFHPGAFTQNDYSSLNVVSCSYDGTVLLWSLSQESPIGE-LEQHPQRVSKVAFHP-- 306
Query: 206 LNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIK 264
N +A D R++D++ +K ++ GH+ +V V + DG V TG DC +
Sbjct: 307 -NG--HHLATACFDSTWRMYDLTTKKELLYQEGHSKSVADVAFHPDGSVALTGGHDCYGR 363
Query: 265 VWETTQGKLIRELKGHGHWVNSLA-LSTEYALRTGAFDHTGKQYSSPEEMKKAALERYN- 322
VW+ G+ I L GH ++S+ + Y + TG+ D++ K + + +
Sbjct: 364 VWDMRTGRCIMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWDLRMRRNTYTMPAHTS 423
Query: 323 ---KIKGNAP-ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASA 378
+++ +A + LVS S D T+ +W QP ++ GH + V SPDGQW+ S+
Sbjct: 424 VVTRVRADAAGQYLVSASFDCTLKMWS-TTGWQPLRQLQGHDTRILCVDISPDGQWMCSS 482
Query: 379 SFDKSIKLW 387
+FD++ KLW
Sbjct: 483 AFDRTFKLW 491
Score = 258 (95.9 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 63/207 (30%), Positives = 105/207 (50%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLV 166
H + V VAF P+G LA+ D+T R++DL T+ + GH V +A+ DG +
Sbjct: 295 HPQRVSKVAFHPNGHHLATACFDSTWRMYDLTTKKELLYQEGHSKSVADVAFHPDGSVAL 354
Query: 167 SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD 226
+G + WD +TG+ L GH K I + W P N ++ S D ++WD
Sbjct: 355 TGGHDCYGRVWDMRTGRCIMF-LDGHTKEIHSVEWMP---NG--YEMITGSSDNSMKVWD 408
Query: 227 VSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVN 285
+ +R+ + HT VT V+ G + + S DCT+K+W TT + +R+L+GH +
Sbjct: 409 LRMRRNTYTMPAHTSVVTRVRADAAGQYLVSASFDCTLKMWSTTGWQPLRQLQGHDTRIL 468
Query: 286 SLALSTEYA-LRTGAFDHTGKQYSSPE 311
+ +S + + + AFD T K ++ +
Sbjct: 469 CVDISPDGQWMCSSAFDRTFKLWAQSD 495
Score = 171 (65.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 53/182 (29%), Positives = 84/182 (46%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+VS S D T+ LW + + P + H Q V+ V F P+G +A+A FD + ++++ TT
Sbjct: 269 VVSCSYDGTVLLWSLS-QESPIGELEQHPQRVSKVAFHPNGHHLATACFDSTWRMYDLTT 327
Query: 392 GKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYC---VVDMS---CCMSL-------YS-- 436
K + GH V + F C V DM C M L +S
Sbjct: 328 KKELLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVE 387
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
W + +++GS D+++KVWD+R ++ +P H V V G+ + S D LK
Sbjct: 388 WMPNGYEMITGSSDNSMKVWDLRMRRNTYTMPAHTSVVTRVRADAAGQYLVSASFDCTLK 447
Query: 497 LW 498
+W
Sbjct: 448 MW 449
Score = 160 (61.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 60/254 (23%), Positives = 110/254 (43%)
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP---VHLNAPCRRFV 214
+SAD +H+V+ +G + W + + GH + P + V
Sbjct: 212 FSADSEHIVTAGWSGSVAVWKREQCAQEIKFI-GHSSQAGCARFHPGAFTQNDYSSLNVV 270
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKL 273
S S DG +W +S + L H V+ V + +G + T D T ++++ T K
Sbjct: 271 SCSYDGTVLLWSLSQESPIGELEQHPQRVSKVAFHPNGHHLATACFDSTWRMYDLTTKKE 330
Query: 274 IRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPEEMKKAALERYNKIKGNA---P 329
+ +GH V +A + ++ TG D G+ + L+ + K + P
Sbjct: 331 LLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMP 390
Query: 330 E--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
+++GS D +M +W+ + + T M H +V V GQ++ SASFD ++K+W
Sbjct: 391 NGYEMITGSSDNSMKVWDLRMRRNTYT-MPAHTSVVTRVRADAAGQYLVSASFDCTLKMW 449
Query: 388 NGTTGKFVAVFRGH 401
+ T + + +GH
Sbjct: 450 STTGWQPLRQLQGH 463
Score = 159 (61.0 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 50/183 (27%), Positives = 80/183 (43%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L + D T +++ +K+ GH + V V F PDG + D ++W+ T
Sbjct: 311 LATACFDSTWRMYD-LTTKKELLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRT 369
Query: 392 GKFVAVFRGHVGPVYQIR-----FELI----------YCFRYPSNFYCVVDMSCCMSLYS 436
G+ + GH ++ + +E+I + R N Y + + ++
Sbjct: 370 GRCIMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWDLRMRRNTYTMPAHTSVVTRVR 429
Query: 437 WSADSRLLLSGSKDSTLKVWDIRT-QKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
A + L+S S D TLK+W Q L+Q L GH + VD SPDG+ + S DR
Sbjct: 430 ADAAGQYLVSASFDCTLKMWSTTGWQPLRQ-LQGHDTRILCVDISPDGQWMCSSAFDRTF 488
Query: 496 KLW 498
KLW
Sbjct: 489 KLW 491
>UNIPROTKB|O42249 [details] [associations]
symbol:gnb2l1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:8128 "Oreochromis niloticus" [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0030178 GO:GO:2000114
GO:GO:0051302 GO:GO:2000543 HOVERGEN:HBG000277 EMBL:AF025331
UniGene:Oni.25 ProteinModelPortal:O42249 SMR:O42249 PRIDE:O42249
Uniprot:O42249
Length = 317
Score = 217 (81.4 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 70/248 (28%), Positives = 115/248 (46%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH+ V V S DG+ SG+ D T+RLWDL T + GH VL +A+SAD
Sbjct: 58 SLKGHSHFVSDVVISSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADN 117
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +VSGS+ ++ W+ GH +W++ + + P N P VS D
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTIQDEGHTEWVSCVRFSPNSSN-PI--IVSCGWDKMV 174
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHG 281
++W+++ K GHT + V DG + +G +D +W+ +GK + L G
Sbjct: 175 KVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDS-G 233
Query: 282 HWVNSLALS-TEYAL--RTGA----FDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVS 334
+N+L S Y L TG +D GK +E+++ + +K + L
Sbjct: 234 DVINALCFSPNRYWLCAATGPSIKIWDLEGKIIV--DELRQEVISTNSKAEPPQCTSLAW 291
Query: 335 GSDDFTMF 342
+D T+F
Sbjct: 292 SADGQTLF 299
Score = 162 (62.1 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 67/263 (25%), Positives = 118/263 (44%)
Query: 148 GHKNWVLCIAWSADGKHLV-SGSKAGELQCWDPQTGKPS-GNP---LSGHKKWITGISWE 202
GH WV IA + ++ S S+ + W + + G P L GH +++ +
Sbjct: 13 GHSGWVTQIATTPKYPDMILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDVV-- 70
Query: 203 PVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDC 261
+++ + +S + DG R+WD++ GHT V V + D I +GS+D
Sbjct: 71 ---ISSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDK 127
Query: 262 TIKVWETTQG-KLIRELKGHGHWVNSLALSTEYA---LRTGAFDHTGKQYSSPE-EMKKA 316
TIK+W T K + +GH WV+ + S + + + +D K ++ ++K
Sbjct: 128 TIKLWNTLGVCKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTN 187
Query: 317 ALER--Y-NKIKGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
+ Y N + + L SG D LW+ K T +G ++N + FSP+
Sbjct: 188 HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDSG--DVINALCFSPNR 245
Query: 373 QWVASASFDKSIKLWNGTTGKFV 395
W+ +A+ SIK+W+ GK +
Sbjct: 246 YWLCAAT-GPSIKIWD-LEGKII 266
Score = 156 (60.0 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 64/222 (28%), Positives = 99/222 (44%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T I+ P + + +SAS+D +W ++ + L GH+ V
Sbjct: 11 LKGHSGWVTQIATTPKYPDM----ILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFV 66
Query: 244 TCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ V DG +G+ D T+++W+ T G R GH V S+A S + + +G+ D
Sbjct: 67 SDVVISSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRD 126
Query: 302 HTGK--------QYSSPEE--MKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQ 351
T K +Y+ +E + + R++ N P +VS D + +W A K
Sbjct: 127 KTIKLWNTLGVCKYTIQDEGHTEWVSCVRFSPNSSN-PI-IVSCGWDKMVKVWNLANCKL 184
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK 393
KT GH +N V SPDG AS D LW+ GK
Sbjct: 185 -KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 225
Score = 154 (59.3 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 55/184 (29%), Positives = 88/184 (47%)
Query: 236 LSGHTLAVTCVKWGGD--GVIYTGSQDCTIKVW-----ETTQGKLIRELKGHGHWVNSLA 288
L GH+ VT + +I + S+D +I +W ET G R LKGH H+V+ +
Sbjct: 11 LKGHSGWVTQIATTPKYPDMILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDVV 70
Query: 289 LSTE--YALRTGAFDHTGKQYSSPEEMKKAALERYNK----IKGNAPER-LVSGSDDFTM 341
+S++ +AL +GA+D T + + + + K + +A R +VSGS D T+
Sbjct: 71 ISSDGQFAL-SGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTI 129
Query: 342 FLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQ--WVASASFDKSIKLWNGTTGKFVAVFR 399
LW + + GH + V+ V FSP+ + S +DK +K+WN K
Sbjct: 130 KLWNTLGVCKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHI 189
Query: 400 GHVG 403
GH G
Sbjct: 190 GHTG 193
Score = 153 (58.9 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 55/186 (29%), Positives = 77/186 (41%)
Query: 100 CSATIA--GHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
C TI GHTE V V FSP+ + S D V++W+L GH ++
Sbjct: 138 CKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNT 197
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ S DG SG K G+ WD GK SG I + + P N R ++
Sbjct: 198 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDSGDV--INALCFSP---N---RYWLC 249
Query: 216 ASKDGDARIWDVS-------LRKCVICLSGHTLAVTCVK--WGGDG-VIYTGSQDCTIKV 265
A+ +IWD+ LR+ VI + C W DG ++ G D I+V
Sbjct: 250 AATGPSIKIWDLEGKIIVDELRQEVISTNSKAEPPQCTSLAWSADGQTLFAGYTDNLIRV 309
Query: 266 WETTQG 271
W+ T G
Sbjct: 310 WQVTIG 315
Score = 133 (51.9 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 438 SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKL 497
S+D + LSG+ D TL++WD+ T + GH +V +V +S D ++ SG +D+ +KL
Sbjct: 72 SSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKL 131
Query: 498 W 498
W
Sbjct: 132 W 132
Score = 123 (48.4 bits), Expect = 7.2e-12, Sum P(2) = 7.2e-12
Identities = 26/86 (30%), Positives = 45/86 (52%)
Query: 329 PERLVSGSDDFTMFLWEPAVSKQ----PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
P+ ++S S D ++ +W+ + P+ + GH V+ V S DGQ+ S ++D ++
Sbjct: 28 PDMILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDVVISSDGQFALSGAWDGTL 87
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQIRF 410
+LW+ TTG F GH V + F
Sbjct: 88 RLWDLTTGLTTRRFVGHTKDVLSVAF 113
Score = 110 (43.8 bits), Expect = 7.2e-12, Sum P(2) = 7.2e-12
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 428 MSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 487
+SC +S ++ + +++S D +KVW++ KLK + GH + V SPDG A
Sbjct: 151 VSCVR--FSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCA 208
Query: 488 SGGKDRVLKLW 498
SGGKD LW
Sbjct: 209 SGGKDGQAMLW 219
Score = 106 (42.4 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 23/66 (34%), Positives = 41/66 (62%)
Query: 436 SWSADSRLLLSGSKDSTLKVWD-IRTQKLKQDLPGHADEVFAVDWSPDGEK--VASGGKD 492
++SAD+R ++SGS+D T+K+W+ + K GH + V V +SP+ + S G D
Sbjct: 112 AFSADNRQIVSGSRDKTIKLWNTLGVCKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWD 171
Query: 493 RVLKLW 498
+++K+W
Sbjct: 172 KMVKVW 177
Score = 69 (29.3 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKVWDI 458
C SL +WSAD + L +G D+ ++VW +
Sbjct: 286 CTSL-AWSADGQTLFAGYTDNLIRVWQV 312
Score = 65 (27.9 bits), Expect = 9.2e-12, Sum P(2) = 9.2e-12
Identities = 14/67 (20%), Positives = 34/67 (50%)
Query: 441 SRLLLSGSKDSTLKVWDIR----TQKLKQDL-----PGHADEVFAVDWSPDGEKVASGGK 491
+R L + ++K+WD+ +L+Q++ + ++ WS DG+ + +G
Sbjct: 244 NRYWLCAATGPSIKIWDLEGKIIVDELRQEVISTNSKAEPPQCTSLAWSADGQTLFAGYT 303
Query: 492 DRVLKLW 498
D ++++W
Sbjct: 304 DNLIRVW 310
Score = 58 (25.5 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 438 SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKV-ASGGKDRVLK 496
S D L SG KD +WD+ K L D + A+ +SP+ + A+ G +K
Sbjct: 201 SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDS-GDVINALCFSPNRYWLCAATGPS--IK 257
Query: 497 LW 498
+W
Sbjct: 258 IW 259
Score = 44 (20.5 bits), Expect = 8.1e-17, Sum P(2) = 8.1e-17
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTG 392
+S DGQ + + D I++W T G
Sbjct: 291 WSADGQTLFAGYTDNLIRVWQVTIG 315
>UNIPROTKB|G4MQX3 [details] [associations]
symbol:MGG_04719 "Guanine nucleotide-binding protein
subunit beta-like protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 GO:GO:0043581 KO:K14753
RefSeq:XP_003710816.1 ProteinModelPortal:G4MQX3 SMR:G4MQX3
EnsemblFungi:MGG_04719T0 GeneID:2677887 KEGG:mgr:MGG_04719
Uniprot:G4MQX3
Length = 316
Score = 218 (81.8 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 55/189 (29%), Positives = 92/189 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH+ V S DG S S D T+RLW+L T T + GH N VL +++SAD
Sbjct: 58 SLKGHSHIVSDCVISSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADN 117
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +VSGS+ ++ W+ GH +W++ + + P N P VS+ D
Sbjct: 118 RQIVSGSRDRSIKLWNTLGDCKYTITEKGHSEWVSCVRFSPNPQN-PV--IVSSGWDKLV 174
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHG 281
++W++S K GHT + V DG + +G +D T +W+ + K + L +
Sbjct: 175 KVWELSSCKLQTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLYSLNAND 234
Query: 282 HWVNSLALS 290
+++L S
Sbjct: 235 E-IHALVFS 242
Score = 189 (71.6 bits), Expect = 4.9e-16, Sum P(2) = 4.9e-16
Identities = 63/213 (29%), Positives = 104/213 (48%)
Query: 103 TIAGHTEAVLSVAFSPDG-RQLASGSGDTTVRLWDLNT-QT----PMFKCTGHKNWVLCI 156
T+ GH V S+A S + L S S D T+ +W+L +T P GH + V
Sbjct: 10 TLEGHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDC 69
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
S+DG + +S S L+ W+ TG + GH + +S+ +A R+ VS
Sbjct: 70 VISSDGAYALSASWDKTLRLWELATGTTTRR-FVGHTNDVLSVSF-----SADNRQIVSG 123
Query: 217 SKDGDARIWDVSLRKC--VICLSGHTLAVTCVKWGGDG---VIYTGSQDCTIKVWETTQG 271
S+D ++W+ +L C I GH+ V+CV++ + VI + D +KVWE +
Sbjct: 124 SRDRSIKLWN-TLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSC 182
Query: 272 KLIRELKGHGHWVNSLALSTEYAL-RTGAFDHT 303
KL + GH ++N++ +S + +L +G D T
Sbjct: 183 KLQTDHIGHTGYINTVTISPDGSLCASGGKDGT 215
Score = 150 (57.9 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 55/215 (25%), Positives = 98/215 (45%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI-----CLSGHTLAV 243
L GH W+T ++ + P +S+S+D IW+++ + L GH+ V
Sbjct: 11 LEGHNGWVTSLA---TSMENP-NMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIV 66
Query: 244 T-CVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ CV + S D T+++WE G R GH + V S++ S + + +G+ D
Sbjct: 67 SDCVISSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRD 126
Query: 302 HTGKQYSSPEEMKKAALERYNK-----IKGNA-PER--LVSGSDDFTMFLWEPAVSKQPK 353
+ K +++ + K E+ + ++ + P+ +VS D + +WE + K +
Sbjct: 127 RSIKLWNTLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKL-Q 185
Query: 354 TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
T GH +N V SPDG AS D + LW+
Sbjct: 186 TDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWD 220
Score = 145 (56.1 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 52/184 (28%), Positives = 89/184 (48%)
Query: 236 LSGHTLAVTCVKWGGDG--VIYTGSQDCTIKVW-----ETTQGKLIRELKGHGHWVNSLA 288
L GH VT + + ++ + S+D T+ +W ET+ G R LKGH H V+
Sbjct: 11 LEGHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDCV 70
Query: 289 LSTE--YALRTGAFDHTGKQYS-SPEEMKKAALERYNKIKG---NAPER-LVSGSDDFTM 341
+S++ YAL + ++D T + + + + + N + +A R +VSGS D ++
Sbjct: 71 ISSDGAYAL-SASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRSI 129
Query: 342 FLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQ--WVASASFDKSIKLWNGTTGKFVAVFR 399
LW + GH + V+ V FSP+ Q + S+ +DK +K+W ++ K
Sbjct: 130 KLWNTLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQTDHI 189
Query: 400 GHVG 403
GH G
Sbjct: 190 GHTG 193
Score = 145 (56.1 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 63/247 (25%), Positives = 108/247 (43%)
Query: 148 GHKNWVLCIAWSADGKH-LVSGSKAGELQCWDPQTGKPS-GNP---LSGHKKWITGISWE 202
GH WV +A S + + L+S S+ L W+ + S G P L GH ++
Sbjct: 13 GHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDCV-- 70
Query: 203 PVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDC 261
+++ +SAS D R+W+++ GHT V V + D I +GS+D
Sbjct: 71 ---ISSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDR 127
Query: 262 TIKVWETTQG-KLIRELKGHGHWVNSLALSTEY---ALRTGAFDHTGK--QYSSPE-EMK 314
+IK+W T K KGH WV+ + S + + +D K + SS + +
Sbjct: 128 SIKLWNTLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQTD 187
Query: 315 KAALERYNKIKGNAPERLV--SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
Y +P+ + SG D T LW+ SK + + + + ++ + FSP+
Sbjct: 188 HIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLYS-LNANDE-IHALVFSPNR 245
Query: 373 QWVASAS 379
W+ +A+
Sbjct: 246 YWLCAAT 252
Score = 134 (52.2 bits), Expect = 7.2e-14, Sum P(2) = 7.2e-14
Identities = 29/86 (33%), Positives = 42/86 (48%)
Query: 329 PERLVSGSDDFTMFLWEPAVSKQ----PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
P L+S S D T+ +W + PK + GH +V+ S DG + SAS+DK++
Sbjct: 28 PNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDCVISSDGAYALSASWDKTL 87
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQIRF 410
+LW TG F GH V + F
Sbjct: 88 RLWELATGTTTRRFVGHTNDVLSVSF 113
Score = 129 (50.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 438 SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKL 497
S+D LS S D TL++W++ T + GH ++V +V +S D ++ SG +DR +KL
Sbjct: 72 SSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRSIKL 131
Query: 498 W 498
W
Sbjct: 132 W 132
Score = 117 (46.2 bits), Expect = 7.2e-14, Sum P(2) = 7.2e-14
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 428 MSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 487
+SC +S + + +++S D +KVW++ + KL+ D GH + V SPDG A
Sbjct: 151 VSCVR--FSPNPQNPVIVSSGWDKLVKVWELSSCKLQTDHIGHTGYINTVTISPDGSLCA 208
Query: 488 SGGKDRVLKLW 498
SGGKD LW
Sbjct: 209 SGGKDGTTMLW 219
Score = 107 (42.7 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 23/66 (34%), Positives = 43/66 (65%)
Query: 436 SWSADSRLLLSGSKDSTLKVWD-IRTQKLKQDLPGHADEVFAVDWSPDGEK--VASGGKD 492
S+SAD+R ++SGS+D ++K+W+ + K GH++ V V +SP+ + + S G D
Sbjct: 112 SFSADNRQIVSGSRDRSIKLWNTLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWD 171
Query: 493 RVLKLW 498
+++K+W
Sbjct: 172 KLVKVW 177
Score = 74 (31.1 bits), Expect = 4.9e-16, Sum P(2) = 4.9e-16
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 438 SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPD 482
S D L SG KD T +WD+ K L + DE+ A+ +SP+
Sbjct: 201 SPDGSLCASGGKDGTTMLWDLNESKHLYSLNAN-DEIHALVFSPN 244
Score = 67 (28.6 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKVWDIRTQ 461
C+SL +WSAD + L +G D+ ++ W + ++
Sbjct: 286 CISL-AWSADGQTLFAGYTDNIIRAWGVMSR 315
Score = 58 (25.5 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 14/61 (22%), Positives = 29/61 (47%)
Query: 438 SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKL 497
+A S ++ K S KV +++ + E ++ WS DG+ + +G D +++
Sbjct: 252 TASSIIIFDLEKKS--KVDELKPEFAAVGKKSREPECISLAWSADGQTLFAGYTDNIIRA 309
Query: 498 W 498
W
Sbjct: 310 W 310
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 260 (96.6 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 58/186 (31%), Positives = 93/186 (50%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH V FSP G AS S D T R+W ++ P+ GH + V C+ W + ++
Sbjct: 458 GHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYI 517
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+GS ++ WD QTG+ GH+ + ++ P R S +DG +W
Sbjct: 518 ATGSSDKTVRLWDVQTGE-CVRIFIGHRSMVLSLAMSP-----DGRYMASGDEDGTIMMW 571
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQG-KLIR--ELKGHG 281
D+S +C+ L GH V + + G+G ++ +GS DCT+K+W+ T KL + E G+
Sbjct: 572 DLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNS 631
Query: 282 HWVNSL 287
+ + SL
Sbjct: 632 NRLRSL 637
Score = 242 (90.2 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 79/246 (32%), Positives = 109/246 (44%)
Query: 94 IRPVNRCSATIA-GHTEAVLSVAFSPDGRQLASGSGDTTVRLWD--LNTQTPMFKCTGHK 150
I P R S T+ GH+ V S FSP G + S S DTT+RLW LN +K GH
Sbjct: 403 IGPNGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYK--GHN 460
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPC 210
V +S G + S S + W +P ++GH + + W P N C
Sbjct: 461 YPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPL-RIMAGHLSDVDCVQWHP---N--C 514
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETT 269
+ S D R+WDV +CV GH V + DG + +G +D TI +W+ +
Sbjct: 515 NYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLS 574
Query: 270 QGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA 328
+ I L GH V SL+ S E +L +G+ D T K + K E N GN+
Sbjct: 575 TARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKN---GNS 631
Query: 329 PERLVS 334
RL S
Sbjct: 632 -NRLRS 636
Score = 187 (70.9 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 45/136 (33%), Positives = 70/136 (51%)
Query: 93 RIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNW 152
RI+P+ +AGH V V + P+ +A+GS D TVRLWD+ T + GH++
Sbjct: 491 RIQPLR----IMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSM 546
Query: 153 VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRR 212
VL +A S DG+++ SG + G + WD T + PL GH + +S+ +
Sbjct: 547 VLSLAMSPDGRYMASGDEDGTIMMWDLSTARCI-TPLMGHNSCVWSLSY-----SGEGSL 600
Query: 213 FVSASKDGDARIWDVS 228
S S D ++WDV+
Sbjct: 601 LASGSADCTVKLWDVT 616
Score = 167 (63.8 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 45/160 (28%), Positives = 76/160 (47%)
Query: 354 TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELI 413
T + GH V FSP G +V S+S D +I+LW+ + ++GH PV+ +F
Sbjct: 412 TLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPF 471
Query: 414 --Y---CFRYPSNFYCVVD-------MSCCMS---LYSWSADSRLLLSGSKDSTLKVWDI 458
Y C + +D M+ +S W + + +GS D T+++WD+
Sbjct: 472 GHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDV 531
Query: 459 RTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+T + + GH V ++ SPDG +ASG +D + +W
Sbjct: 532 QTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMW 571
Score = 159 (61.0 bits), Expect = 5.3e-09, Sum P(2) = 5.3e-09
Identities = 48/182 (26%), Positives = 86/182 (47%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
++S S D T+ LW ++ GH V FSP G + AS S D++ ++W+
Sbjct: 433 VLSSSADTTIRLWSTKLNAN-LVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDR 491
Query: 392 GKFVAVFRGHVGPVYQIRFE--LIYCFRYPSNFYCVV-DMSC--CMSLY----------S 436
+ + + GH+ V +++ Y S+ + D+ C+ ++ +
Sbjct: 492 IQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLA 551
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
S D R + SG +D T+ +WD+ T + L GH V+++ +S +G +ASG D +K
Sbjct: 552 MSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVK 611
Query: 497 LW 498
LW
Sbjct: 612 LW 613
Score = 154 (59.3 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 53/218 (24%), Positives = 100/218 (45%)
Query: 182 GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTL 241
G+ S L GH + ++ P P +S+S D R+W L ++C GH
Sbjct: 407 GRRSYTLLLGHSGPVYSATFSP-----PGDFVLSSSADTTIRLWSTKLNANLVCYKGHNY 461
Query: 242 AVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLAL--STEYALRTG 298
V ++ G + S D T ++W + + +R + GH V+ + + Y + TG
Sbjct: 462 PVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNY-IATG 520
Query: 299 AFDHTGKQYS-SPEEMKKAALERYNKIKGNA--PER--LVSGSDDFTMFLWEPAVSKQPK 353
+ D T + + E + + + + A P+ + SG +D T+ +W+ + ++
Sbjct: 521 SSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCI- 579
Query: 354 TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
T + GH V + +S +G +AS S D ++KLW+ T+
Sbjct: 580 TPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTS 617
Score = 141 (54.7 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 46/142 (32%), Positives = 72/142 (50%)
Query: 334 SGSDDFTMFLWEPAVSK-QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
S S D T +W ++ + QP M GH V+ V + P+ ++A+ S DK+++LW+ TG
Sbjct: 477 SCSHDRTARIW--SMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTG 534
Query: 393 KFVAVFRGHVGPVYQI------RF-----ELIYCFRYP-SNFYCVVDM----SCCMSLYS 436
+ V +F GH V + R+ E + S C+ + SC SL S
Sbjct: 535 ECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSL-S 593
Query: 437 WSADSRLLLSGSKDSTLKVWDI 458
+S + LL SGS D T+K+WD+
Sbjct: 594 YSGEGSLLASGSADCTVKLWDV 615
Score = 54 (24.1 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 8/23 (34%), Positives = 16/23 (69%)
Query: 115 AFSPDGRQLASGSGDTTVRLWDL 137
+ S DG +A G D+++++WD+
Sbjct: 359 SISHDGSLVAGGFSDSSIKVWDM 381
Score = 40 (19.1 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWD 178
N + C + S DG + G ++ WD
Sbjct: 353 NGLNCSSISHDGSLVAGGFSDSSIKVWD 380
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 241 (89.9 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 80/298 (26%), Positives = 141/298 (47%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT-GHKNWVLCIAWSADG 162
++GH V F P+G LAS D + +W++ + GH V+ + ++ DG
Sbjct: 52 LSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDG 111
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
L S S + WD +TG+ L GH ++ S P P + + S DG
Sbjct: 112 SLLFSASTDKTVCVWDSETGERVKR-LKGHTSFVN--SCFPAR-RGP-QLACTGSDDGTV 166
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ +K + +T V V + D +I +G D IKVW+ Q KLI ++GH
Sbjct: 167 KLWDIR-KKASVHTFQNTYQVLSVTFNDTSDQII-SGGIDNDIKVWDLRQNKLIYSMQGH 224
Query: 281 GHWVNSLALSTEYA-LRTGAFDHTGKQYS----SPEE--MK--KAALERYNK----IKGN 327
G V L+LS + + L + + D++ + + +P+E +K + + + K +
Sbjct: 225 GDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWS 284
Query: 328 AP-ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
A ++ +GS D +++W+ +++ ++ GH VN V F P+ V S S DK +
Sbjct: 285 ADGSKIAAGSADRFVYIWD-TTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRL 341
Score = 178 (67.7 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 47/168 (27%), Positives = 82/168 (48%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
AT+ GH+ AV+ + ++ DG L S S D TV +WD T + + GH ++V +
Sbjct: 93 ATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARR 152
Query: 162 GKHLV-SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
G L +GS G ++ WD + K S + + ++ V N + +S D
Sbjct: 153 GPQLACTGSDDGTVKLWDIRK-KASVHTFQNTYQVLS------VTFNDTSDQIISGGIDN 205
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWE 267
D ++WD+ K + + GH +VT + DG + + S D +++VW+
Sbjct: 206 DIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWD 253
Score = 171 (65.3 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 69/286 (24%), Positives = 127/286 (44%)
Query: 140 QTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
Q P+ +GH+ V C + +G L S + W+ + L GH +G
Sbjct: 46 QAPIMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGH----SGA 101
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV-TCVKWG-GDGVIYTG 257
E +H N SAS D +WD + V L GHT V +C G + TG
Sbjct: 102 VME-LHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTG 160
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKA 316
S D T+K+W+ + + + + + V S+ + T + +G D+ K + +
Sbjct: 161 SDDGTVKLWDIRKKASVHTFQ-NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIY 219
Query: 317 ALERY-NKIKG---NAP-ERLVSGSDDFTMFLWE--PAVSKQPKTRM-TGH----QQLVN 364
+++ + + + G +A L+S S D ++ +W+ P K+ ++ G+ ++ +
Sbjct: 220 SMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLL 279
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+S DG +A+ S D+ + +W+ TT + V GH G V ++ F
Sbjct: 280 RCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAF 325
Score = 162 (62.1 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 48/170 (28%), Positives = 80/170 (47%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLV 166
+T VLSV F+ Q+ SG D +++WDL ++ GH + V ++ SADG +L+
Sbjct: 182 NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLL 241
Query: 167 SGSKAGELQCWDPQTGKPS--------GNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
S S ++ WD + P GN + +K + SW +A + + S
Sbjct: 242 SNSMDNSVRVWDIRPFAPKERCVKIFQGN-VHNFEKNLLRCSW-----SADGSKIAAGSA 295
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWE 267
D IWD + R+ V L GH +V V + + ++ +GS D + + E
Sbjct: 296 DRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRLYIGE 345
Score = 162 (62.1 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 46/182 (25%), Positives = 80/182 (43%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L S D + +W + + GH V ++++ DG + SAS DK++ +W+ T
Sbjct: 71 LASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSET 130
Query: 392 GKFVAVFRGHVGPVYQI----RFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLL--- 444
G+ V +GH V R + C + D+ S++++ ++L
Sbjct: 131 GERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQNTYQVLSVT 190
Query: 445 --------LSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+SG D+ +KVWD+R KL + GH D V + S DG + S D ++
Sbjct: 191 FNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVR 250
Query: 497 LW 498
+W
Sbjct: 251 VW 252
Score = 144 (55.7 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 56/218 (25%), Positives = 95/218 (43%)
Query: 305 KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
+ Y++ + A +E + G+ L S S D T+ +W+ ++ K R+ GH VN
Sbjct: 90 ENYATLKGHSGAVMELHYNTDGSL---LFSASTDKTVCVWDSETGERVK-RLKGHTSFVN 145
Query: 365 HVYFSPDG-QWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE------------ 411
+ + G Q + S D ++KLW+ V F+ + V + F
Sbjct: 146 SCFPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQ-NTYQVLSVTFNDTSDQIISGGID 204
Query: 412 ---LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRT----QKLK 464
++ R Y + ++ S SAD LLS S D++++VWDIR ++
Sbjct: 205 NDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCV 264
Query: 465 QDLPG--HADE--VFAVDWSPDGEKVASGGKDRVLKLW 498
+ G H E + WS DG K+A+G DR + +W
Sbjct: 265 KIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIW 302
Score = 136 (52.9 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 35/115 (30%), Positives = 57/115 (49%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT----GH---- 149
N+ ++ GH ++V ++ S DG L S S D +VR+WD+ P +C G+
Sbjct: 215 NKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNF 274
Query: 150 -KNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
KN + C +WSADG + +GS + WD T + L GH + +++ P
Sbjct: 275 EKNLLRC-SWSADGSKIAAGSADRFVYIWDTTTRRIVYK-LPGHAGSVNEVAFHP 327
Score = 121 (47.7 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
SWSAD + +GS D + +WD T+++ LPGHA V V + P+ V SG D+
Sbjct: 282 SWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDK-- 339
Query: 496 KLWMG 500
+L++G
Sbjct: 340 RLYIG 344
>WB|WBGene00010556 [details] [associations]
symbol:rack-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000281 "cytokinesis
after mitosis" evidence=IMP] [GO:0040038 "polar body extrusion
after meiotic divisions" evidence=IMP] [GO:0051304 "chromosome
separation" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0005635 GO:GO:0005813 GO:GO:0000776
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426 GO:GO:0030334
GO:GO:0008045 GO:GO:0040035 GO:GO:0000281 GO:GO:0033365
GO:GO:0040038 GO:GO:0044297 GO:GO:0006997 GO:GO:0048675 EMBL:Z69664
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 PIR:T23309 RefSeq:NP_501859.1
ProteinModelPortal:Q21215 SMR:Q21215 DIP:DIP-26516N IntAct:Q21215
MINT:MINT-1071040 STRING:Q21215 World-2DPAGE:0020:Q21215
PaxDb:Q21215 PRIDE:Q21215 EnsemblMetazoa:K04D7.1.1
EnsemblMetazoa:K04D7.1.2 EnsemblMetazoa:K04D7.1.3
EnsemblMetazoa:K04D7.1.4 GeneID:177895 KEGG:cel:CELE_K04D7.1
UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1 InParanoid:Q21215
NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 216 (81.1 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
Identities = 57/196 (29%), Positives = 94/196 (47%)
Query: 96 PVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
P+ R ++ GH V V S DG+ SGS D T+RLWDLN + H VL
Sbjct: 57 PIGRPVRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLS 116
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+A+SAD + +VSGS+ ++ W+ H W++ + + P + + P VS
Sbjct: 117 VAFSADNRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRD-PV--IVS 173
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLI 274
A D ++W++ + GHT V V DG + +G +D +W+ +GK +
Sbjct: 174 AGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHL 233
Query: 275 RELKGHGHWVNSLALS 290
L G+ +N+++ S
Sbjct: 234 YTLPGNDV-INAMSFS 248
Score = 179 (68.1 bits), Expect = 7.0e-15, Sum P(2) = 7.0e-15
Identities = 58/213 (27%), Positives = 105/213 (49%)
Query: 99 RCSATIAGHTEAVLSVAFSP--DGRQLASGSGDTTVRLWDLNTQTPMFK---------CT 147
+ + T+ GHT V +A D + S S D T+ +WD+++ P+ + T
Sbjct: 7 KLTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLT 66
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLN 207
GH ++V + S+DG+ +SGS L+ WD G + +S H K + +++ +
Sbjct: 67 GHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFIS-HTKDVLSVAF-----S 120
Query: 208 APCRRFVSASKDGDARIWDVSLRKCVICLSG--HTLAVTCVKWGG---DGVIYTGSQDCT 262
A R+ VS S+D ++W+ +L +C ++ HT V+ V++ D VI + D
Sbjct: 121 ADNRQIVSGSRDKSIKLWN-TLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKV 179
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYAL 295
+KVW +L GH +VN++ +S + +L
Sbjct: 180 VKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSL 212
Score = 177 (67.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 50/176 (28%), Positives = 86/176 (48%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTG--HKNWVLCIAWSADGKH 164
HT+ VLSVAFS D RQ+ SGS D +++LW+ Q + T H +WV + +S +
Sbjct: 110 HTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLAQCK-YTITDDCHTDWVSTVRFSPSNRD 168
Query: 165 --LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+VS ++ W+ + N + GH ++ ++ P + C S KDG A
Sbjct: 169 PVIVSAGWDKVVKVWNLGNCRLKTNHI-GHTGYVNTVTVSPD--GSLC---ASGGKDGQA 222
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
+WD++ K + L G+ + + + + + + +IK+W+ K I ELK
Sbjct: 223 MLWDLNEGKHLYTLPGNDV-INAMSFSPNRYWLCAAVGSSIKIWDLEDKKEIEELK 277
Score = 137 (53.3 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 58/229 (25%), Positives = 99/229 (43%)
Query: 189 LSGHKKWITGISW-----EPVHLNAPCRRFVSA-SKDGDARIWDVSLRKCVICLSGHTLA 242
L GH W+T I+ + L++ + + D A + + + + V L+GH
Sbjct: 12 LEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHF 71
Query: 243 VTCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAF 300
V+ V DG +GS D T+++W+ QG R+ H V S+A S + + +G+
Sbjct: 72 VSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSR 131
Query: 301 DHTGKQYSSPEEMKKAALER-----YNKIKGNAPER---LVSGSDDFTMFLWEPAVSKQP 352
D + K +++ + K + + ++ + R +VS D + +W +
Sbjct: 132 DKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRL- 190
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
KT GH VN V SPDG AS D LW+ GK + G+
Sbjct: 191 KTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGN 239
Score = 135 (52.6 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 60/241 (24%), Positives = 108/241 (44%)
Query: 251 DGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE--YALRTGAFDHTGKQYS 308
D I D V E G+ +R L GH H+V+ + +S++ +AL +G++D T + +
Sbjct: 39 DKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFAL-SGSWDKTLRLWD 97
Query: 309 SPEEMKKAALERYNK----IKGNAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTG--HQQ 361
+ + + K + +A R +VSGS D ++ LW Q K +T H
Sbjct: 98 LNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLA--QCKYTITDDCHTD 155
Query: 362 LVNHVYFSPDGQ--WVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF--ELIYCFR 417
V+ V FSP + + SA +DK +K+WN + GH G V + + C
Sbjct: 156 WVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCAS 215
Query: 418 YPSNFYCVV-DMSCCMSLYSWSAD----------SRLLLSGSKDSTLKVWDIRTQKLKQD 466
+ ++ D++ LY+ + +R L + S++K+WD+ +K ++
Sbjct: 216 GGKDGQAMLWDLNEGKHLYTLPGNDVINAMSFSPNRYWLCAAVGSSIKIWDLEDKKEIEE 275
Query: 467 L 467
L
Sbjct: 276 L 276
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 438 SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKL 497
S+D + LSGS D TL++WD+ + H +V +V +S D ++ SG +D+ +KL
Sbjct: 78 SSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKL 137
Query: 498 W 498
W
Sbjct: 138 W 138
Score = 112 (44.5 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 28/92 (30%), Positives = 45/92 (48%)
Query: 327 NAPERLVSGSDDFTMFLWE-PAVSK-------QPKTRMTGHQQLVNHVYFSPDGQWVASA 378
N ++S S D T+ +W+ +V+ +P +TGH V+ V S DGQ+ S
Sbjct: 28 NDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFALSG 87
Query: 379 SFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
S+DK+++LW+ G F H V + F
Sbjct: 88 SWDKTLRLWDLNQGVSTRQFISHTKDVLSVAF 119
Score = 108 (43.1 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 435 YSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
+S S +++S D +KVW++ +LK + GH V V SPDG ASGGKD
Sbjct: 162 FSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQ 221
Query: 495 LKLW 498
LW
Sbjct: 222 AMLW 225
Score = 105 (42.0 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPG--HADEVFAVDWSPDGEK--VASGGK 491
++SAD+R ++SGS+D ++K+W+ Q K + H D V V +SP + S G
Sbjct: 118 AFSADNRQIVSGSRDKSIKLWNTLAQ-CKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGW 176
Query: 492 DRVLKLW 498
D+V+K+W
Sbjct: 177 DKVVKVW 183
Score = 76 (31.8 bits), Expect = 7.0e-15, Sum P(2) = 7.0e-15
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 438 SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKV-ASGGKDRVLK 496
S D L SG KD +WD+ K LPG+ D + A+ +SP+ + A+ G +K
Sbjct: 207 SPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGN-DVINAMSFSPNRYWLCAAVGSS--IK 263
Query: 497 LW 498
+W
Sbjct: 264 IW 265
Score = 71 (30.1 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
Identities = 16/68 (23%), Positives = 37/68 (54%)
Query: 441 SRLLLSGSKDSTLKVWDIRTQK----LKQDLP------GHADEVFAVDWSPDGEKVASGG 490
+R L + S++K+WD+ +K LK ++ G + + ++ WS DG+ + +G
Sbjct: 250 NRYWLCAAVGSSIKIWDLEDKKEIEELKPEIASSGSSRGSSPQCISLAWSQDGQTLFAGY 309
Query: 491 KDRVLKLW 498
D +++++
Sbjct: 310 TDNIIRVY 317
Score = 57 (25.1 bits), Expect = 9.7e-18, Sum P(2) = 9.7e-18
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKVWDI 458
C+SL +WS D + L +G D+ ++V+ +
Sbjct: 293 CISL-AWSQDGQTLFAGYTDNIIRVYQV 319
>UNIPROTKB|Q21215 [details] [associations]
symbol:rack-1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0018991 GO:GO:0040010 GO:GO:0005635 GO:GO:0005813
GO:GO:0000776 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426
GO:GO:0030334 GO:GO:0008045 GO:GO:0040035 GO:GO:0000281
GO:GO:0033365 GO:GO:0040038 GO:GO:0044297 GO:GO:0006997
GO:GO:0048675 EMBL:Z69664 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 PIR:T23309
RefSeq:NP_501859.1 ProteinModelPortal:Q21215 SMR:Q21215
DIP:DIP-26516N IntAct:Q21215 MINT:MINT-1071040 STRING:Q21215
World-2DPAGE:0020:Q21215 PaxDb:Q21215 PRIDE:Q21215
EnsemblMetazoa:K04D7.1.1 EnsemblMetazoa:K04D7.1.2
EnsemblMetazoa:K04D7.1.3 EnsemblMetazoa:K04D7.1.4 GeneID:177895
KEGG:cel:CELE_K04D7.1 UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1
InParanoid:Q21215 NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 216 (81.1 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
Identities = 57/196 (29%), Positives = 94/196 (47%)
Query: 96 PVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
P+ R ++ GH V V S DG+ SGS D T+RLWDLN + H VL
Sbjct: 57 PIGRPVRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLS 116
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+A+SAD + +VSGS+ ++ W+ H W++ + + P + + P VS
Sbjct: 117 VAFSADNRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRD-PV--IVS 173
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLI 274
A D ++W++ + GHT V V DG + +G +D +W+ +GK +
Sbjct: 174 AGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHL 233
Query: 275 RELKGHGHWVNSLALS 290
L G+ +N+++ S
Sbjct: 234 YTLPGNDV-INAMSFS 248
Score = 179 (68.1 bits), Expect = 7.0e-15, Sum P(2) = 7.0e-15
Identities = 58/213 (27%), Positives = 105/213 (49%)
Query: 99 RCSATIAGHTEAVLSVAFSP--DGRQLASGSGDTTVRLWDLNTQTPMFK---------CT 147
+ + T+ GHT V +A D + S S D T+ +WD+++ P+ + T
Sbjct: 7 KLTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLT 66
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLN 207
GH ++V + S+DG+ +SGS L+ WD G + +S H K + +++ +
Sbjct: 67 GHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFIS-HTKDVLSVAF-----S 120
Query: 208 APCRRFVSASKDGDARIWDVSLRKCVICLSG--HTLAVTCVKWGG---DGVIYTGSQDCT 262
A R+ VS S+D ++W+ +L +C ++ HT V+ V++ D VI + D
Sbjct: 121 ADNRQIVSGSRDKSIKLWN-TLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKV 179
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYAL 295
+KVW +L GH +VN++ +S + +L
Sbjct: 180 VKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSL 212
Score = 177 (67.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 50/176 (28%), Positives = 86/176 (48%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTG--HKNWVLCIAWSADGKH 164
HT+ VLSVAFS D RQ+ SGS D +++LW+ Q + T H +WV + +S +
Sbjct: 110 HTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLAQCK-YTITDDCHTDWVSTVRFSPSNRD 168
Query: 165 --LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+VS ++ W+ + N + GH ++ ++ P + C S KDG A
Sbjct: 169 PVIVSAGWDKVVKVWNLGNCRLKTNHI-GHTGYVNTVTVSPD--GSLC---ASGGKDGQA 222
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
+WD++ K + L G+ + + + + + + +IK+W+ K I ELK
Sbjct: 223 MLWDLNEGKHLYTLPGNDV-INAMSFSPNRYWLCAAVGSSIKIWDLEDKKEIEELK 277
Score = 137 (53.3 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 58/229 (25%), Positives = 99/229 (43%)
Query: 189 LSGHKKWITGISW-----EPVHLNAPCRRFVSA-SKDGDARIWDVSLRKCVICLSGHTLA 242
L GH W+T I+ + L++ + + D A + + + + V L+GH
Sbjct: 12 LEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHF 71
Query: 243 VTCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAF 300
V+ V DG +GS D T+++W+ QG R+ H V S+A S + + +G+
Sbjct: 72 VSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSR 131
Query: 301 DHTGKQYSSPEEMKKAALER-----YNKIKGNAPER---LVSGSDDFTMFLWEPAVSKQP 352
D + K +++ + K + + ++ + R +VS D + +W +
Sbjct: 132 DKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRL- 190
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
KT GH VN V SPDG AS D LW+ GK + G+
Sbjct: 191 KTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGN 239
Score = 135 (52.6 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 60/241 (24%), Positives = 108/241 (44%)
Query: 251 DGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE--YALRTGAFDHTGKQYS 308
D I D V E G+ +R L GH H+V+ + +S++ +AL +G++D T + +
Sbjct: 39 DKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFAL-SGSWDKTLRLWD 97
Query: 309 SPEEMKKAALERYNK----IKGNAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTG--HQQ 361
+ + + K + +A R +VSGS D ++ LW Q K +T H
Sbjct: 98 LNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLA--QCKYTITDDCHTD 155
Query: 362 LVNHVYFSPDGQ--WVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF--ELIYCFR 417
V+ V FSP + + SA +DK +K+WN + GH G V + + C
Sbjct: 156 WVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCAS 215
Query: 418 YPSNFYCVV-DMSCCMSLYSWSAD----------SRLLLSGSKDSTLKVWDIRTQKLKQD 466
+ ++ D++ LY+ + +R L + S++K+WD+ +K ++
Sbjct: 216 GGKDGQAMLWDLNEGKHLYTLPGNDVINAMSFSPNRYWLCAAVGSSIKIWDLEDKKEIEE 275
Query: 467 L 467
L
Sbjct: 276 L 276
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 438 SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKL 497
S+D + LSGS D TL++WD+ + H +V +V +S D ++ SG +D+ +KL
Sbjct: 78 SSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKL 137
Query: 498 W 498
W
Sbjct: 138 W 138
Score = 112 (44.5 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 28/92 (30%), Positives = 45/92 (48%)
Query: 327 NAPERLVSGSDDFTMFLWE-PAVSK-------QPKTRMTGHQQLVNHVYFSPDGQWVASA 378
N ++S S D T+ +W+ +V+ +P +TGH V+ V S DGQ+ S
Sbjct: 28 NDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFALSG 87
Query: 379 SFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
S+DK+++LW+ G F H V + F
Sbjct: 88 SWDKTLRLWDLNQGVSTRQFISHTKDVLSVAF 119
Score = 108 (43.1 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 435 YSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
+S S +++S D +KVW++ +LK + GH V V SPDG ASGGKD
Sbjct: 162 FSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQ 221
Query: 495 LKLW 498
LW
Sbjct: 222 AMLW 225
Score = 105 (42.0 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 24/67 (35%), Positives = 40/67 (59%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPG--HADEVFAVDWSPDGEK--VASGGK 491
++SAD+R ++SGS+D ++K+W+ Q K + H D V V +SP + S G
Sbjct: 118 AFSADNRQIVSGSRDKSIKLWNTLAQ-CKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGW 176
Query: 492 DRVLKLW 498
D+V+K+W
Sbjct: 177 DKVVKVW 183
Score = 76 (31.8 bits), Expect = 7.0e-15, Sum P(2) = 7.0e-15
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 438 SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKV-ASGGKDRVLK 496
S D L SG KD +WD+ K LPG+ D + A+ +SP+ + A+ G +K
Sbjct: 207 SPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGN-DVINAMSFSPNRYWLCAAVGSS--IK 263
Query: 497 LW 498
+W
Sbjct: 264 IW 265
Score = 71 (30.1 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
Identities = 16/68 (23%), Positives = 37/68 (54%)
Query: 441 SRLLLSGSKDSTLKVWDIRTQK----LKQDLP------GHADEVFAVDWSPDGEKVASGG 490
+R L + S++K+WD+ +K LK ++ G + + ++ WS DG+ + +G
Sbjct: 250 NRYWLCAAVGSSIKIWDLEDKKEIEELKPEIASSGSSRGSSPQCISLAWSQDGQTLFAGY 309
Query: 491 KDRVLKLW 498
D +++++
Sbjct: 310 TDNIIRVY 317
Score = 57 (25.1 bits), Expect = 9.7e-18, Sum P(2) = 9.7e-18
Identities = 10/28 (35%), Positives = 19/28 (67%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKVWDI 458
C+SL +WS D + L +G D+ ++V+ +
Sbjct: 293 CISL-AWSQDGQTLFAGYTDNIIRVYQV 319
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 256 (95.2 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 81/298 (27%), Positives = 135/298 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
I GH V SVAF P +GS D T+++WD+ T TGH V +A S
Sbjct: 172 IQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHT 231
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
++ S +++CWD + K + GH + ++ P L+ ++ +D R
Sbjct: 232 YMFSAGDDKQVKCWDLEQNKVIRS-YHGHLSGVYCLALHPT-LDV----LLTGGRDSVCR 285
Query: 224 IWDVSLRKCVICLSGHTLAVTCV-KWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
+WD+ + + LSGH V V D + TGS D TIK W+ GK + L H
Sbjct: 286 VWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKK 345
Query: 283 WVNSLALST-EYALRTGAFDHTGKQYSSPE-EMKKAALERY----NKIKGNAPERLVSGS 336
V ++ L E A + + D+T K++S P+ E L + N + N +V+G
Sbjct: 346 SVRAMTLHPKENAFASASADNT-KKFSLPKGEFCHNMLSQQKTIINAMAVNEDGVMVTGG 404
Query: 337 DDFTMFLWEPAVS---KQPKTRMT-GHQQLVNHVY---FSPDGQWVASASFDKSIKLW 387
D+ +++ W+ +Q +T + G + +Y + G + + DK+IK+W
Sbjct: 405 DNGSIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAACYDNTGSRLVTCEADKTIKMW 462
Score = 185 (70.2 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 61/236 (25%), Positives = 103/236 (43%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
N+ + GH V +A P L +G D+ R+WD+ T+ +F +GH N V +
Sbjct: 250 NKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVF 309
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+V+GS ++ WD + GK L+ HKK + ++ P NA F SAS
Sbjct: 310 TRPTDPQVVTGSHDTTIKFWDLRYGKTMST-LTHHKKSVRAMTLHPKE-NA----FASAS 363
Query: 218 KDGDARIWDVSLRKCVIC---LSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLI 274
D + SL K C LS + + DGV+ TG + +I W+ G
Sbjct: 364 ADNTKKF---SLPKGEFCHNMLSQQKTIINAMAVNEDGVMVTGGDNGSIWFWDWKSGHSF 420
Query: 275 RELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPE 330
++ + V +L +E + +D+TG + + E K ++ + + + PE
Sbjct: 421 QQSETI---VQPGSLESEAGIYAACYDNTGSRLVTCEADK--TIKMWKEDENATPE 471
Score = 157 (60.3 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 45/159 (28%), Positives = 72/159 (45%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV--------YQIR 409
GH V V F P +W + S D++IK+W+ TG GH+ V +
Sbjct: 174 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYM 233
Query: 410 FEL-----IYCFRYPSN-----FYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIR 459
F + C+ N ++ + C++L+ + D +LL+G +DS +VWDIR
Sbjct: 234 FSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHP-TLD--VLLTGGRDSVCRVWDIR 290
Query: 460 TQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
T+ L GH + V +V P +V +G D +K W
Sbjct: 291 TKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFW 329
Score = 152 (58.6 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 63/267 (23%), Positives = 110/267 (41%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH E V +A S + S D V+ WDL + GH + V C+A
Sbjct: 213 TLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTL 272
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
L++G + + WD +T K LSGH + + P P + V+ S D
Sbjct: 273 DVLLTGGRDSVCRVWDIRT-KMQIFALSGHDNTVCSVFTRPTD---P--QVVTGSHDTTI 326
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETTQGKLIRELKGHG 281
+ WD+ K + L+ H +V + + + S D T K + +G+ +
Sbjct: 327 KFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNT-KKFSLPKGEFCHNMLSQQ 385
Query: 282 HWV-NSLALSTEYALRTGA-------FD-HTGKQYSSPEEM-KKAALER----YNKIKGN 327
+ N++A++ + + TG +D +G + E + + +LE Y N
Sbjct: 386 KTIINAMAVNEDGVMVTGGDNGSIWFWDWKSGHSFQQSETIVQPGSLESEAGIYAACYDN 445
Query: 328 APERLVSGSDDFTMFLWEPAVSKQPKT 354
RLV+ D T+ +W+ + P+T
Sbjct: 446 TGSRLVTCEADKTIKMWKEDENATPET 472
Score = 140 (54.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 49/182 (26%), Positives = 78/182 (42%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
E +GS D T+ +W+ A K +TGH + V + S ++ SA DK +K W+
Sbjct: 189 EWFCTGSADRTIKIWDVATGVL-KLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDL 247
Query: 390 TTGKFVAVFRGHVGPVYQIRFE--LIYCFRYPSNFYCVV-DMSCCMSLYSWSA-DSRL-- 443
K + + GH+ VY + L + C V D+ M +++ S D+ +
Sbjct: 248 EQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCS 307
Query: 444 ---------LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
+++GS D+T+K WD+R K L H V A+ P AS D
Sbjct: 308 VFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNT 367
Query: 495 LK 496
K
Sbjct: 368 KK 369
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 259 (96.2 bits), Expect = 3.6e-19, P = 3.6e-19
Identities = 66/205 (32%), Positives = 102/205 (49%)
Query: 104 IAGHTEAVLSVAFSPD-GRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H+ V S+ GR LA+G D V +W +N + TGH + + SA
Sbjct: 16 IVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S D D
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLLGHKANICSLDFHPYG------SFVASGSLDTD 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WDV + C+ HT AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGH 188
Query: 281 GHWVNSLAL--STEYALRTGAFDHT 303
VN + S EY L +G+ T
Sbjct: 189 YGPVNVVEFHPSIEYLLASGSSSMT 213
Score = 201 (75.8 bits), Expect = 9.8e-13, P = 9.8e-13
Identities = 58/204 (28%), Positives = 93/204 (45%)
Query: 71 LEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSA--TIAGHTEAVLSVAFSPDGRQLASGSG 128
+E ++S ++ L + R+ + T+ GH + S+ F P G +ASGS
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 129 DTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNP 188
DT ++LWD+ + +FK H V C+ +S DGK L S + ++ WD GK
Sbjct: 126 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFE- 184
Query: 189 LSGHKKWITGISWEPV--HLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCV 246
+GH + + + P +L A S S R WD+ V C+ V C+
Sbjct: 185 FTGHYGPVNVVEFHPSIEYLLA------SGSSSMTIRFWDLEKFHVVSCIEEEATPVRCI 238
Query: 247 KWGGDGV-IYTGSQDCTIKV--WE 267
+ DG +Y G QD +++V WE
Sbjct: 239 LFNPDGCCLYGGFQD-SLRVYGWE 261
Score = 189 (71.6 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 60/196 (30%), Positives = 87/196 (44%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + VW + + L GH + SL +S + L A +G E
Sbjct: 35 LLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIV-AGSQSGSIRVWDLE 93
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P + SGS D + LW+ K + H Q V
Sbjct: 94 AAKI-LRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVR-RKGCIFKYKSHTQAVR 151
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYC 424
+ FSPDG+W+ASA+ D ++KLW+ T GK + F GH GPV + F +PS Y
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEF-------HPSIEYL 204
Query: 425 VVDMSCCMSLYSWSAD 440
+ S M++ W +
Sbjct: 205 LASGSSSMTIRFWDLE 220
Score = 154 (59.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 48/233 (20%), Positives = 100/233 (42%)
Query: 97 VNR--CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
VN+ C ++ GHT + S+ S + +GS ++R+WDL + GHK +
Sbjct: 50 VNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANIC 109
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+ + G + SGS +++ WD + K H + + + + P +
Sbjct: 110 SLDFHPYGSFVASGSLDTDIKLWDVRR-KGCIFKYKSHTQAVRCLRFSP-----DGKWLA 163
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG--DGVIYTGSQDCTIKVWETTQGK 272
SA+ D ++WD++ K + +GH V V++ + ++ +GS TI+ W+ +
Sbjct: 164 SAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFH 223
Query: 273 LIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERYNKI 324
++ ++ V + + + G F + + Y PE + + K+
Sbjct: 224 VVSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWEPERCFDVVVVNWGKV 276
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 44/193 (22%), Positives = 81/193 (41%)
Query: 324 IKGNAPERLVS-GSDDFTMFLWEPAVSKQPKTR-MTGHQQLVNHVYFSPDGQWVASASFD 381
+ G + RL++ G DD + +W +V+K +TGH + + S + + + S
Sbjct: 27 VLGKSTGRLLATGGDDCRVNVW--SVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQS 84
Query: 382 KSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDM-----SCCMSLYS 436
SI++W+ K + GH + + F F + + + C+ Y
Sbjct: 85 GSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYK 144
Query: 437 ----------WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKV 486
+S D + L S + D T+K+WD+ K+ + GH V V++ P E +
Sbjct: 145 SHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYL 204
Query: 487 -ASGGKDRVLKLW 498
ASG ++ W
Sbjct: 205 LASGSSSMTIRFW 217
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 251 (93.4 bits), Expect = 3.8e-19, P = 3.8e-19
Identities = 82/298 (27%), Positives = 143/298 (47%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT-GHKNWVLCIAWSADG 162
++GH V F P G LAS D + LW++ + GH V+ + ++ DG
Sbjct: 89 LSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDG 148
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
L S S + WD +TG+ L GH ++ S P P + + S DG
Sbjct: 149 SMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--SCYPAR-RGP-QLVCTGSDDGTV 203
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGSQDCTIKVWETTQGKLIRELKGH 280
++WD+ +K + +T V V + D +I +G D IKVW+ Q KL ++GH
Sbjct: 204 KLWDIR-KKAAVQTFQNTYQVLAVTFNDTSDQII-SGGIDNDIKVWDLRQNKLTYTMRGH 261
Query: 281 GHWVNSLALSTEYA-LRTGAFDHTGKQYS----SPEE--MK--KAALERYNK--IKGN-A 328
V L+LS+E + L + A D+T + + +P+E +K + + + K ++ + +
Sbjct: 262 ADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWS 321
Query: 329 PE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
P+ ++ GS D +++W+ S++ ++ GH VN + F P+ + SAS DK +
Sbjct: 322 PDGSKIAGGSADRFVYVWD-TTSRRILYKLPGHAGSVNELAFHPEEPIILSASSDKRL 378
Score = 232 (86.7 bits), Expect = 7.4e-17, P = 7.4e-17
Identities = 80/302 (26%), Positives = 142/302 (47%)
Query: 215 SASKDGDARIWDVSLRKC--VICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQG 271
SA D +W+V C L GH+ AV + + DG ++++ S D T+ VW++ G
Sbjct: 110 SAGFDRLILLWNV-YGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETG 168
Query: 272 KLIRELKGHGHWVNSL--ALSTEYALRTGAFDHTGKQYSSPEEMKKAALERY-NKIK--- 325
+ ++ LKGH +VNS A + TG+ D T K + + KKAA++ + N +
Sbjct: 169 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW---DIRKKAAVQTFQNTYQVLA 225
Query: 326 ---GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
+ ++++SG D + +W+ +K T M GH V + S +G ++ S + D
Sbjct: 226 VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT-MRGHADSVTGLSLSSEGSYLLSNAMDN 284
Query: 383 SIKLWN----GTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWS 438
++++W+ + V +F+G+V + L+ C SWS
Sbjct: 285 TVRIWDVRPFAPKERCVKIFQGNV---HNFEKNLLRC--------------------SWS 321
Query: 439 ADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
D + GS D + VWD ++++ LPGHA V + + P+ + S D+ +L+
Sbjct: 322 PDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPIILSASSDK--RLY 379
Query: 499 MG 500
MG
Sbjct: 380 MG 381
Score = 176 (67.0 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 44/168 (26%), Positives = 82/168 (48%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
AT+ GH+ AV+ + ++ DG L S S D TV +WD T + + GH ++V +
Sbjct: 130 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARR 189
Query: 162 GKHLV-SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
G LV +GS G ++ WD + K + + + +++ N + +S D
Sbjct: 190 GPQLVCTGSDDGTVKLWDIR--KKAAVQTFQNTYQVLAVTF-----NDTSDQIISGGIDN 242
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWE 267
D ++WD+ K + GH +VT + +G + + + D T+++W+
Sbjct: 243 DIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWD 290
Score = 172 (65.6 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 66/286 (23%), Positives = 125/286 (43%)
Query: 140 QTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
Q P+ +GH+ V C + G L S + W+ + L GH +G
Sbjct: 83 QAPIMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGH----SGA 138
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAV-TCVKWG-GDGVIYTG 257
E +H N SAS D +WD + V L GHT V +C G ++ TG
Sbjct: 139 VME-LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTG 197
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKA 316
S D T+K+W+ + ++ + + + V ++ + T + +G D+ K + +
Sbjct: 198 SDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTY 256
Query: 317 ALERY-NKIKG----NAPERLVSGSDDFTMFLWE--PAVSKQPKTRM-TGH----QQLVN 364
+ + + + G + L+S + D T+ +W+ P K+ ++ G+ ++ +
Sbjct: 257 TMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLL 316
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+SPDG +A S D+ + +W+ T+ + + GH G V ++ F
Sbjct: 317 RCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAF 362
Score = 169 (64.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 49/183 (26%), Positives = 82/183 (44%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L S D + LW + GH V ++++ DG + SAS DK++ +W+ T
Sbjct: 108 LASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET 167
Query: 392 GKFVAVFRGH---VGPVYQIRF--ELIYCFRYPSNFYCVVDM------SCCMSLY----- 435
G+ V +GH V Y R +L+ C + D+ + Y
Sbjct: 168 GERVKRLKGHTSFVNSCYPARRGPQLV-CTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAV 226
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
+++ S ++SG D+ +KVWD+R KL + GHAD V + S +G + S D +
Sbjct: 227 TFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTV 286
Query: 496 KLW 498
++W
Sbjct: 287 RIW 289
Score = 136 (52.9 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 37/123 (30%), Positives = 61/123 (49%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT----GH---- 149
N+ + T+ GH ++V ++ S +G L S + D TVR+WD+ P +C G+
Sbjct: 252 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNF 311
Query: 150 -KNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW---EPVH 205
KN + C +WS DG + GS + WD T + L GH + +++ EP+
Sbjct: 312 EKNLLRC-SWSPDGSKIAGGSADRFVYVWDT-TSRRILYKLPGHAGSVNELAFHPEEPII 369
Query: 206 LNA 208
L+A
Sbjct: 370 LSA 372
Score = 125 (49.1 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 50/190 (26%), Positives = 77/190 (40%)
Query: 228 SLRKCVICLSGHTLAVTCVK---WGGDGVIYTGSQDCTIKVWETTQGKL--IRELKGHGH 282
SL+ ++ LSGH V C K WG + + D I +W G LKGH
Sbjct: 81 SLQAPIMLLSGHEGEVYCCKFHPWGN--TLASAGFDRLILLWNV-YGDCDNYATLKGHSG 137
Query: 283 WVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA------PERLVSG 335
V L +T+ + L + + D T + S + L+ + + P+ + +G
Sbjct: 138 AVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTG 197
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
SDD T+ LW+ +T +Q L V F+ + S D IK+W+ K
Sbjct: 198 SDDGTVKLWDIRKKAAVQTFQNTYQVLA--VTFNDTSDQIISGGIDNDIKVWDLRQNKLT 255
Query: 396 AVFRGHVGPV 405
RGH V
Sbjct: 256 YTMRGHADSV 265
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 236 (88.1 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 59/192 (30%), Positives = 95/192 (49%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
+T+ GH V+SV SP G +AS S D +RLWDL + + +A+S D
Sbjct: 58 STLEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPD 117
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+HL +GS G++ + +TGK + L K+I I++ P + S + DG
Sbjct: 118 SQHLATGSHVGKVNIFGVETGKKEYS-LDTRGKFILSIAYSP-----DGKYLASGAIDGI 171
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGH 280
I+D++ K + L GH + + + + D ++ T S D IK++E L L GH
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGH 231
Query: 281 GHWVNSLALSTE 292
G WV ++A S +
Sbjct: 232 GSWVLNVAFSPD 243
Score = 206 (77.6 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 50/158 (31%), Positives = 84/158 (53%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
+LS+A+SPDG+ LASG+ D + ++D+ T + GH + + +S D + LV+ S
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR 230
G ++ ++ Q + LSGH W+ +++ P + FVS+S D ++WDVS R
Sbjct: 211 DGYIKIYEVQHASLAAT-LSGHGSWVLNVAFSPDDTH-----FVSSSSDKSVKVWDVSAR 264
Query: 231 KCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
CV H V VK+ +G I + + D I V++
Sbjct: 265 TCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVYD 302
Score = 194 (73.4 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 56/177 (31%), Positives = 87/177 (49%)
Query: 105 AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH 164
AG +A SVAFSPD + LA+GS V ++ + T + ++L IA+S DGK+
Sbjct: 104 AGPVDA-WSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKY 162
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
L SG+ G + +D TGK + L GH I +++ P + V+AS DG +I
Sbjct: 163 LASGAIDGIINIFDIATGKLL-HTLEGHAMPIRSLTFSP-----DSQLLVTASDDGYIKI 216
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGH 280
++V LSGH V V + D + + S D ++KVW+ + + H
Sbjct: 217 YEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDH 273
Score = 165 (63.1 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 73/288 (25%), Positives = 126/288 (43%)
Query: 137 LNTQ-TPMFKCT-GHKNWVLCIAW---SADGKHLV-SGSKAGELQCWDPQTGKPS-GNPL 189
++TQ + +FK H++ + + W S DG LV SGS ++ W + + L
Sbjct: 1 MSTQYSILFKQEHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTL 60
Query: 190 SGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG 249
GH+ + + P N S+S D R+WD+ K + + + V +
Sbjct: 61 EGHQLGVVSVDVSPSG-NI----MASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFS 115
Query: 250 GDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQY 307
D + TGS + ++ GK L G ++ S+A S + L +GA D +
Sbjct: 116 PDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 308 SSPEEMKKAALERYNK-IKGN--APER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
LE + I+ +P+ LV+ SDD + ++E + T ++GH
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAAT-LSGHGSW 234
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
V +V FSPD S+S DKS+K+W+ + V F H V+ +++
Sbjct: 235 VLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKY 282
Score = 146 (56.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 32/124 (25%), Positives = 62/124 (50%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ FSPD + L + S D ++++++ + +GH +WVL +A+S D
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDD 244
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H VS S ++ WD + + + H+ + G+ + N + VS + D +
Sbjct: 245 THFVSSSSDKSVKVWDV-SARTCVHTFLDHQDQVWGVKY-----NKNGSKIVSVADDQEI 298
Query: 223 RIWD 226
++D
Sbjct: 299 HVYD 302
Score = 142 (55.0 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 39/148 (26%), Positives = 69/148 (46%)
Query: 366 VYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF----ELIYCFRYPS- 420
+ +SPDG+++AS + D I +++ TGK + GH P+ + F +L+
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY 213
Query: 421 -NFYCVVDMSCCMSLY---SW------SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGH 470
Y V S +L SW S D +S S D ++KVWD+ + H
Sbjct: 214 IKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDH 273
Query: 471 ADEVFAVDWSPDGEKVASGGKDRVLKLW 498
D+V+ V ++ +G K+ S D+ + ++
Sbjct: 274 QDQVWGVKYNKNGSKIVSVADDQEIHVY 301
Score = 134 (52.2 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 31/104 (29%), Positives = 54/104 (51%)
Query: 77 SVEKVLSIVYQPQAVFRIRPVNRCS--ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRL 134
S + L + +I V S AT++GH VL+VAFSPD S S D +V++
Sbjct: 199 SPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKV 258
Query: 135 WDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
WD++ +T + H++ V + ++ +G +VS + E+ +D
Sbjct: 259 WDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVYD 302
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 196 (74.1 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 74/303 (24%), Positives = 132/303 (43%)
Query: 100 CSATIAGHTEAVLSV--AFSPDGRQL-ASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI 156
CS +AGH E VLS+ S G L +GS D TVRLW+ +++ + TGH +L +
Sbjct: 393 CSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAV 452
Query: 157 AWSADG-KHLVSGSKAGELQCWDPQ-TGKPSGNPLSGHKKWITGISWEPVHLNAPCRR-- 212
A++ VSGS L+ W + S P++ + + + ++ A R
Sbjct: 453 AFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDS 512
Query: 213 -FVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETTQ 270
+ S+D A IW + V+ L GH + V++ D + T S D T+K+W +
Sbjct: 513 LVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISD 572
Query: 271 GKLIRELKGHGHWVNSLALSTEYA--LRTGAFDHTGKQYSSPEEMKKAALERY-NKI--- 324
G ++ +GH V + T+ + GA D K ++ A +++ +K+
Sbjct: 573 GSCLKTFEGHTSSVLRASFITDGTQFVSCGA-DGLLKLWNVNTSECIATYDQHEDKVWAL 631
Query: 325 -KGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKS 383
G E + +G D + LW + + + ++ + + V A + K+
Sbjct: 632 AVGKKTEMIATGGGDAVINLWHDSTASDKEDDFRKEEEAILRGQELENA--VLDAEYTKA 689
Query: 384 IKL 386
I+L
Sbjct: 690 IRL 692
Score = 194 (73.4 bits), Expect = 7.5e-19, Sum P(2) = 7.5e-19
Identities = 72/297 (24%), Positives = 127/297 (42%)
Query: 221 DARIWDVSLRKCVICLSGHTLAV----TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRE 276
+ R++DV+ C L+GH V TCV G+ +I TGS+D T+++W T I
Sbjct: 382 EVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGV 441
Query: 277 LKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGS 336
G GH N L+ +A ++ +F +G S +K +L+ S
Sbjct: 442 --GTGH--NGDILAVAFAKKSFSFFVSG---SGDRTLKVWSLDGI--------------S 480
Query: 337 DDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVA 396
+D EP ++ + ++ + H + +N V + + V + S D++ +W V
Sbjct: 481 EDSE----EP-INLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVV 535
Query: 397 VFRGHVGPVYQIRFELI-YCFRYPSN-----FYCVVDMSCCMSLY---------SWSADS 441
+GH ++ + F + C S + + D SC + S+ D
Sbjct: 536 TLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDG 595
Query: 442 RLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+S D LK+W++ T + H D+V+A+ E +A+GG D V+ LW
Sbjct: 596 TQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLW 652
Score = 183 (69.5 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 45/171 (26%), Positives = 84/171 (49%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
+TI G ++ + ++A SPD + L S +R+WDL T + GH+ V+ +A A
Sbjct: 54 STIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHAS 113
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
G L + ++ WD G + + GHK ++ I + P ++ +S S D
Sbjct: 114 GGLLATAGADRKVLVWDVDGGFCT-HYFRGHKGVVSSILFHP---DSNKNILISGSDDAT 169
Query: 222 ARIWDVSLR----KCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
R+WD++ + KC+ + H AVT + DG+ +++ +D + +W+
Sbjct: 170 VRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWD 220
Score = 151 (58.2 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 74/313 (23%), Positives = 128/313 (40%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQ-LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI--A 157
S + G+ E + + F D Q LA + VR++D+ T + + GHK VL +
Sbjct: 351 SKRLVGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTC 410
Query: 158 WSADGKHL-VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
S+ G L V+GSK ++ W+ T K +GH I +++ + FVS
Sbjct: 411 VSSSGNVLIVTGSKDKTVRLWNA-TSKSCIGVGTGHNGDILAVAFAKKSFSF----FVSG 465
Query: 217 SKDGDARIWD-----------VSLRKCVICLSGHTLAVTCVKWG-GDGVIYTGSQDCTIK 264
S D ++W ++L+ + ++ H + V D ++ TGS+D T
Sbjct: 466 SGDRTLKVWSLDGISEDSEEPINLKTRSV-VAAHDKDINSVAVARNDSLVCTGSEDRTAS 524
Query: 265 VWETTQGKLIRELKGHGHWVNSLALST-EYALRTGAFDHTGKQYSSPEEMKKAALERYNK 323
+W + LKGH + S+ ST + + T + D T K ++ + E +
Sbjct: 525 IWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTS 584
Query: 324 IKGNAP-----ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASA 378
A + VS D + LW S+ T H+ V + + +A+
Sbjct: 585 SVLRASFITDGTQFVSCGADGLLKLWNVNTSECIAT-YDQHEDKVWALAVGKKTEMIATG 643
Query: 379 SFDKSIKLWNGTT 391
D I LW+ +T
Sbjct: 644 GGDAVINLWHDST 656
Score = 141 (54.7 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 73/311 (23%), Positives = 133/311 (42%)
Query: 173 ELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKC 232
E++ +D T S L+GHK+ + +S + ++ V+ SKD R+W+ + + C
Sbjct: 382 EVRVYDVATMSCS-YVLAGHKEVV--LSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSC 438
Query: 233 VICLSGHTLAVTCVKWGGDGVIY--TGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS 290
+ +GH + V + + +GS D T+KVW + G I E +N L
Sbjct: 439 IGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVW-SLDG--ISEDSEEP--IN---LK 490
Query: 291 TEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSK 350
T + A D +++ A+ R + + + +GS+D T +W
Sbjct: 491 TRSVV--AAHD---------KDINSVAVARNDSL-------VCTGSEDRTASIWRLPDLV 532
Query: 351 QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
T + GH++ + V FS Q V +AS DK++K+W + G + F GH V + F
Sbjct: 533 HVVT-LKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASF 591
Query: 411 -----ELIYCFRYPSNFYCVVDMSCCMSLYS------WSA----DSRLLLSGSKDSTLKV 455
+ + C V+ S C++ Y W+ + ++ +G D+ + +
Sbjct: 592 ITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINL 651
Query: 456 WDIRTQKLKQD 466
W T K+D
Sbjct: 652 WHDSTASDKED 662
Score = 132 (51.5 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 40/173 (23%), Positives = 73/173 (42%)
Query: 96 PVN-RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
P+N + + +A H + + SVA + + + +GS D T +W L + GHK +
Sbjct: 486 PINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIF 545
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+ +S + +++ S ++ W G GH + S+ +FV
Sbjct: 546 SVEFSTVDQCVMTASGDKTVKIWAISDGSCL-KTFEGHTSSVLRASFI-----TDGTQFV 599
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVW 266
S DG ++W+V+ +C+ H V + G +I TG D I +W
Sbjct: 600 SCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLW 652
Score = 115 (45.5 bits), Expect = 7.5e-19, Sum P(2) = 7.5e-19
Identities = 40/166 (24%), Positives = 67/166 (40%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C + GH V+ +A G LA+ D V +WD++ GHK V I +
Sbjct: 93 KCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILF 152
Query: 159 SADGKH--LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
D L+SGS ++ WD L+ +K + ++ + L+ SA
Sbjct: 153 HPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVT--SIALSEDGLTLFSA 210
Query: 217 SKDGDARIWDVSLRKCVICLSGHTL--AVTCVKWGGDGVIYTGSQD 260
+D +WD+ C ++ + + AVT V G + S D
Sbjct: 211 GRDKVVNLWDLHDYSCKATVATYEVLEAVTTVSSGTPFASFVASLD 256
Score = 105 (42.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 21/69 (30%), Positives = 40/69 (57%)
Query: 434 LYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQD----LPGHADEVFAVDWSPDGEKVASG 489
L+ ++ +L+SGS D+T++VWD+ + ++ + H V ++ S DG + S
Sbjct: 151 LFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSA 210
Query: 490 GKDRVLKLW 498
G+D+V+ LW
Sbjct: 211 GRDKVVNLW 219
Score = 81 (33.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
K+ + G + + SPD + + SA + I++W+ T K + ++GH GPV
Sbjct: 53 KSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPV 105
Score = 67 (28.6 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
GH+ V + G +A+A D+ + +W+ G FRGH G V I F
Sbjct: 100 GHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILF 152
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 182 (69.1 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 88/362 (24%), Positives = 147/362 (40%)
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNP--LSGHKKWITGISWEPVHLNAPCRRFVSASK 218
+G H ++ + ++ D P L GH+ + +W PV S S
Sbjct: 136 NGAHTIANNHTDMMEV-DGDVEIPPNKAVVLRGHESEVFICAWNPVS-----DLLASGSG 189
Query: 219 DGDARIWDVS-----------LRKCVICLSGHTLA----VTCVKWGGDGVIY-TGSQDCT 262
D ARIW++S LR C I G + VT + W +G + TGS D
Sbjct: 190 DSTARIWNLSENSTSGSTQLVLRHC-IREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGF 248
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTE--YALRTGAFDHTGKQYSSPEEMKKAALER 320
++W T G L L H + +L + + + L G D T + + K
Sbjct: 249 ARIW-TKDGNLASTLGQHKGPIFALKWNKKGNFILSAGV-DKTTIIWDAHTGEAKQQFPF 306
Query: 321 YNK----IKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVA 376
++ + + S S D + + + + KT GH VN + + P G +A
Sbjct: 307 HSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKT-FQGHTNEVNAIKWDPTGNLLA 365
Query: 377 SASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYS 436
S S D ++K+W+ V + H +Y I++ P+ + + + L S
Sbjct: 366 SCSDDMTLKIWSMKQDSCVHDLQAHNKEIYTIKWS-------PTG-PGTNNPNANLMLAS 417
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
L S S DST+++WD+ L H + V++V +SPDG +ASG D+ +
Sbjct: 418 -------LDSASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVH 470
Query: 497 LW 498
+W
Sbjct: 471 IW 472
Score = 171 (65.3 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 54/183 (29%), Positives = 74/183 (40%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLV 166
H+ L V + + AS S D + + L P+ GH N V I W G L
Sbjct: 307 HSAPALDVDWQSNNT-FASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLA 365
Query: 167 SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH--LNAPCRRFV-----SASKD 219
S S L+ W + + L H K I I W P N P + SAS D
Sbjct: 366 SCSDDMTLKIWSMKQDS-CVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASLDSASFD 424
Query: 220 GDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELK 278
R+WDV C+ L+ H V V + DG + +GS D + +W T G L+ +
Sbjct: 425 STVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYR 484
Query: 279 GHG 281
G G
Sbjct: 485 GTG 487
Score = 166 (63.5 bits), Expect = 7.6e-19, Sum P(2) = 7.6e-19
Identities = 65/243 (26%), Positives = 103/243 (42%)
Query: 96 PVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLN-------TQTPMFKCT- 147
P N+ + + GH V A++P LASGSGD+T R+W+L+ TQ + C
Sbjct: 158 PPNK-AVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIR 216
Query: 148 -GHKNW-----VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
G ++ V + W+++G L +GS G + W S L HK I + W
Sbjct: 217 EGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDGNLAS--TLGQHKGPIFALKW 274
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDC 261
N +SA D IWD + H+ V W + + S D
Sbjct: 275 -----NKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDM 329
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALER 320
I V + Q + I+ +GH + VN++ T L + + D T K +S ++ L+
Sbjct: 330 CIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCVHDLQA 389
Query: 321 YNK 323
+NK
Sbjct: 390 HNK 392
Score = 138 (53.6 bits), Expect = 7.6e-19, Sum P(2) = 7.6e-19
Identities = 32/77 (41%), Positives = 46/77 (59%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L S S D T+ LW+ T +T HQ+ V V FSPDG+++AS SFDK + +WN T
Sbjct: 418 LDSASFDSTVRLWDVDRGICIHT-LTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQT 476
Query: 392 GKFVAVFRGHVGPVYQI 408
G V +RG G ++++
Sbjct: 477 GALVHSYRG-TGGIFEV 492
Score = 127 (49.8 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 31/84 (36%), Positives = 44/84 (52%)
Query: 93 RIRPVNR--CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
R+ V+R C T+ H E V SVAFSPDGR LASGS D V +W+ T + G
Sbjct: 428 RLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-T 486
Query: 151 NWVLCIAWSADGKHLVSGSKAGEL 174
+ + W+A G + + + G +
Sbjct: 487 GGIFEVCWNAAGDKVGASASDGSV 510
Score = 86 (35.3 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKD 492
++S D R L SGS D + +W+ +T L G +F V W+ G+KV + D
Sbjct: 452 AFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGG-IFEVCWNAAGDKVGASASD 507
Score = 37 (18.1 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 8 TNNVMCLLTDPEGNPLGA 25
TN V + DP GN L +
Sbjct: 349 TNEVNAIKWDPTGNLLAS 366
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 192 (72.6 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 56/214 (26%), Positives = 100/214 (46%)
Query: 96 PVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
P NR ++ GH +AV + F+ DG+ L S S D+ +++W+ T+ +F H+ V
Sbjct: 991 PNNRVFSSGIGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTEEYVF-LQAHQETVKD 1049
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
D + L+S S G ++ W+ TG+ + + H+ + + +++ +F S
Sbjct: 1050 FRLLRDSR-LLSWSFDGTVKVWNVITGRIERD-FTCHQGTVLSCA-----ISSDATKFSS 1102
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLI 274
S D A+IW L + L GH V C + DG++ TG + I++W + G+L+
Sbjct: 1103 TSADKTAKIWSFELPSPLHELKGHNSCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLL 1162
Query: 275 REL------KG---HGHWVNSLALSTEYALRTGA 299
+G HG WV + S + + A
Sbjct: 1163 HLCAPISIEEGTATHGGWVTDVCFSPDRKMLVSA 1196
Score = 190 (71.9 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 103/430 (23%), Positives = 178/430 (41%)
Query: 103 TIAGHTEAVLSVAFSPDGRQL--ASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
T H+E V F+ L A+GS D+ ++LWDLN + GH N V +S
Sbjct: 694 TYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLWDLNQKECRNTMFGHTNSVTHCRFSP 753
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW-EPVHLNAPCRRFVSASKD 219
D + L S S G L+ WD ++ + ++ + +++ E V + C S S D
Sbjct: 754 DDELLASCSADGTLKLWDVRSANEKKS-INVKRFFLSSEDPPEDVEVIVKC---CSWSAD 809
Query: 220 GDARIWDVSLRKCVICLSGHTLAV-TCVKWGGDGVI-YTG------------SQDCTIKV 265
GD I V+ + V+ L HT + T + G I Y SQ C +++
Sbjct: 810 GDRII--VAAKNKVLLLDIHTSGLLTEIHTGHHSTIQYCDFSPYDHLAVIALSQYC-VEL 866
Query: 266 WETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAA--LERYN 322
W + + +GH WV+ + S + + T + D T + + + + K +A L++
Sbjct: 867 WNIDSRVKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETRKVCKNSAIVLKQEI 926
Query: 323 KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
+ E +V D+ + K + Q V+ SP ++VA +
Sbjct: 927 DVVFQENEMMVLAVDNIRGL--QLIAGKTGQIDYLPEAQ-VSCCCLSPHLEYVAFGDEEG 983
Query: 383 SIKLWNGTTGKFVAVFRGHVGPVYQIRF-------------ELIYCFRYPSNFYCVVDMS 429
+IK+ + + GH V I+F +I + + + Y +
Sbjct: 984 AIKIIELPNNRVFSSGIGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTEEYVFLQAH 1043
Query: 430 C-CMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVAS 488
+ + DSRLL S S D T+KVW++ T ++++D H V + S D K +S
Sbjct: 1044 QETVKDFRLLRDSRLL-SWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSS 1102
Query: 489 GGKDRVLKLW 498
D+ K+W
Sbjct: 1103 TSADKTAKIW 1112
Score = 185 (70.2 bits), Expect = 8.2e-19, Sum P(2) = 8.2e-19
Identities = 46/173 (26%), Positives = 86/173 (49%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
N + HT+AV FS DG+++AS D T++++ T + H++ VLC A
Sbjct: 605 NLSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCA 664
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW--EPVHLNAPCRRFVS 215
+S+D ++ + S +++ WD TGK + H + + + + HL +
Sbjct: 665 FSSDDSYIATCSVDKKVKIWDSGTGKLV-HTYEEHSEQVNCCHFTNKSNHL-----LLAT 718
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWE 267
S D ++WD++ ++C + GHT +VT ++ D + S D T+K+W+
Sbjct: 719 GSNDSFLKLWDLNQKECRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLWD 771
Score = 162 (62.1 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 72/272 (26%), Positives = 117/272 (43%)
Query: 239 HTLAV--TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-L 295
HT AV C G + G+ D T++V++ G+ + ++K H V A S++ + +
Sbjct: 614 HTDAVYHACFSQDGQRIASCGA-DKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYI 672
Query: 296 RTGAFDH--------TGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPA 347
T + D TGK + EE + + K N L +GS+D + LW+
Sbjct: 673 ATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHFTNKSNHL-LLATGSNDSFLKLWD-L 730
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
K+ + M GH V H FSPD + +AS S D ++KLW+ + +
Sbjct: 731 NQKECRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLWDVRSAN-------EKKSINV 783
Query: 408 IRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDL 467
RF + P + +V CC SWSAD ++ +K+ L + DI T L ++
Sbjct: 784 KRF-FLSSEDPPEDVEVIV--KCC----SWSADGDRIIVAAKNKVLLL-DIHTSGLLTEI 835
Query: 468 -PGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
GH + D+SP ++LW
Sbjct: 836 HTGHHSTIQYCDFSPYDHLAVIALSQYCVELW 867
Score = 159 (61.0 bits), Expect = 5.8e-16, Sum P(2) = 5.8e-16
Identities = 57/185 (30%), Positives = 78/185 (42%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL----- 154
C T+ GHT +V FSPD LAS S D T++LWD+ + K K + L
Sbjct: 735 CRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLWDVRSANEK-KSINVKRFFLSSEDP 793
Query: 155 ---------CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV- 204
C +WSADG ++ +K ++ D T +GH I + P
Sbjct: 794 PEDVEVIVKCCSWSADGDRIIVAAK-NKVLLLDIHTSGLLTEIHTGHHSTIQYCDFSPYD 852
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTI 263
HL V A +W++ R V GH V V + DG + T S D TI
Sbjct: 853 HLA------VIALSQYCVELWNIDSRVKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTI 906
Query: 264 KVWET 268
+VWET
Sbjct: 907 RVWET 911
Score = 141 (54.7 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 63/241 (26%), Positives = 102/241 (42%)
Query: 76 VSVEKVLSIVYQPQAVFRIRPVN-RCSATIAGHT-------EAVLSVA-FSPDGRQLASG 126
+ +++ + +V+Q + + N R IAG T EA +S SP +A G
Sbjct: 920 IVLKQEIDVVFQENEMMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFG 979
Query: 127 SGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSG 186
+ +++ +L GHK V I ++ADGK L+S S+ +Q W+ QT +
Sbjct: 980 DEEGAIKIIELPNNRVFSSGIGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTEEYVF 1039
Query: 187 NPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCV 246
L H++ + + L R +S S DG ++W+V + + H V
Sbjct: 1040 --LQAHQETV-----KDFRLLRDSR-LLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSC 1091
Query: 247 KWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTG 304
D ++ S D T K+W + ELKGH V A S + L TG D G
Sbjct: 1092 AISSDATKFSSTSADKTAKIWSFELPSPLHELKGHNSCVRCSAFSLDGILLATG--DDNG 1149
Query: 305 K 305
+
Sbjct: 1150 E 1150
Score = 128 (50.1 bits), Expect = 8.2e-19, Sum P(2) = 8.2e-19
Identities = 41/155 (26%), Positives = 70/155 (45%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----L 412
GH++ V H+ F+ DG+ + S+S D I++WN T ++V + + H V R L
Sbjct: 1001 GHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTEEYVFL-QAHQETVKDFRLLRDSRLL 1059
Query: 413 IYCFRYPSNFYCVV------DMSCCMSLY---SWSADSRLLLSGSKDSTLKVWDIRTQKL 463
+ F + V+ D +C + S+D+ S S D T K+W
Sbjct: 1060 SWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFELPSP 1119
Query: 464 KQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+L GH V +S DG +A+G + +++W
Sbjct: 1120 LHELKGHNSCVRCSAFSLDGILLATGDDNGEIRIW 1154
Score = 76 (31.8 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 34/149 (22%), Positives = 62/149 (41%)
Query: 257 GSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYS-SPEE-- 312
G ++ IK+ E ++ GH V + + + L + + D + ++ EE
Sbjct: 979 GDEEGAIKIIELPNNRVFSSGIGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTEEYV 1038
Query: 313 MKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
+A E + RL+S S D T+ +W ++ + + T HQ V S D
Sbjct: 1039 FLQAHQETVKDFRLLRDSRLLSWSFDGTVKVWN-VITGRIERDFTCHQGTVLSCAISSDA 1097
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGH 401
+S S DK+ K+W+ + +GH
Sbjct: 1098 TKFSSTSADKTAKIWSFELPSPLHELKGH 1126
Score = 37 (18.1 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 7/28 (25%), Positives = 13/28 (46%)
Query: 140 QTPMFKCTGHKNWVLCIAWSADGKHLVS 167
Q ++K G WV + GK +++
Sbjct: 137 QQKLWKLNGEPGWVTIYGMAGCGKSVLA 164
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 249 (92.7 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 85/307 (27%), Positives = 147/307 (47%)
Query: 88 PQAVFRIRPVNRCSAT------IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
P A+ + P RCS+ ++GH V F P+G LAS D + LW++
Sbjct: 41 PGALLQAGPP-RCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDC 99
Query: 142 PMFKCT-GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGIS 200
+ GH V+ + ++ DG L S S + WD +TG+ L GH ++ S
Sbjct: 100 DNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKR-LKGHTSFVN--S 156
Query: 201 WEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGS 258
P P + + S DG ++WD+ +K I +T V V + D +I +G
Sbjct: 157 CYPAR-RGP-QLVCTGSDDGTVKLWDIR-KKAAIQTFQNTYQVLAVTFNDTSDQII-SGG 212
Query: 259 QDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYS----SPEE- 312
D IKVW+ Q KL ++GH V L+LS+E + L + A D+T + + +P+E
Sbjct: 213 IDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKER 272
Query: 313 -MK--KAALERYNK--IKGN-APE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
+K + + + K ++ + +P+ ++ +GS D +++W+ S++ ++ GH +N
Sbjct: 273 CVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD-TTSRRILYKLPGHAGSIN 331
Query: 365 HVYFSPD 371
V F PD
Sbjct: 332 EVAFHPD 338
Score = 231 (86.4 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 85/322 (26%), Positives = 148/322 (45%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKC--VICLSGHTLAVTCV 246
LSGH+ + + P N SA D +W+V C L GH+ AV +
Sbjct: 62 LSGHEGEVYCCKFHP---NGST--LASAGFDRLILLWNV-YGDCDNYATLKGHSGAVMEL 115
Query: 247 KWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSL--ALSTEYALRTGAFDHT 303
+ DG ++++ S D T+ VW++ G+ ++ LKGH +VNS A + TG+ D T
Sbjct: 116 HYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGT 175
Query: 304 GKQYSSPEEMKKAALERY-NKIK------GNAPERLVSGSDDFTMFLWEPAVSKQPKTRM 356
K + + KKAA++ + N + + ++++SG D + +W+ +K T M
Sbjct: 176 VKLW---DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYT-M 231
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWN----GTTGKFVAVFRGHVGPVYQIRFEL 412
GH V + S +G ++ S + D ++++W+ + V +F+G+V + L
Sbjct: 232 RGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV---HNFEKNL 288
Query: 413 IYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHAD 472
+ C SWS D + +GS D + VWD ++++ LPGHA
Sbjct: 289 LRC--------------------SWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAG 328
Query: 473 EVFAVDWSPDGEKVASGGKDRV 494
+ V + PD E + G R+
Sbjct: 329 SINEVAFHPD-EPIIETGFHRI 349
Score = 193 (73.0 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 60/213 (28%), Positives = 100/213 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
+ GHT V S + G QL +GS D TV+LWD+ + + + + VL + ++
Sbjct: 147 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAI-QTFQNTYQVLAVTFNDTS 205
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
++SG +++ WD + K + + GH +TG+S L++ +S + D
Sbjct: 206 DQIISGGIDNDIKVWDLRQNKLTYT-MRGHADSVTGLS-----LSSEGSYLLSNAMDNTV 259
Query: 223 RIWDVS----LRKCVICLSG--HTLAVTCVK--WGGDGV-IYTGSQDCTIKVWETTQGKL 273
R+WDV +CV G H ++ W DG I GS D + VW+TT ++
Sbjct: 260 RVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRI 319
Query: 274 IRELKGHGHWVNSLALST-EYALRTGAFDHTGK 305
+ +L GH +N +A E + TG F G+
Sbjct: 320 LYKLPGHAGSINEVAFHPDEPIIETG-FHRIGQ 351
Score = 168 (64.2 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 49/183 (26%), Positives = 82/183 (44%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L S D + LW + GH V ++++ DG + SAS DK++ +W+ T
Sbjct: 81 LASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET 140
Query: 392 GKFVAVFRGH---VGPVYQIRF--ELIYCFRYPSNFYCVVDM------SCCMSLY----- 435
G+ V +GH V Y R +L+ C + D+ + Y
Sbjct: 141 GERVKRLKGHTSFVNSCYPARRGPQLV-CTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAV 199
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
+++ S ++SG D+ +KVWD+R KL + GHAD V + S +G + S D +
Sbjct: 200 TFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTV 259
Query: 496 KLW 498
++W
Sbjct: 260 RVW 262
Score = 109 (43.4 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 25/71 (35%), Positives = 40/71 (56%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRT----QKLKQDLPG--HADE--VFAVDWSPDGEKVA 487
S S++ LLS + D+T++VWD+R ++ + G H E + WSPDG K+A
Sbjct: 242 SLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIA 301
Query: 488 SGGKDRVLKLW 498
+G DR + +W
Sbjct: 302 AGSADRFVYVW 312
Score = 95 (38.5 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN--GTTGKFVAVFRGHVGPVYQIR 409
P ++GH+ V F P+G +ASA FD+ I LWN G + A +GH G V ++
Sbjct: 58 PIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNY-ATLKGHSGAVMELH 116
Query: 410 F 410
+
Sbjct: 117 Y 117
>UNIPROTKB|P49027 [details] [associations]
symbol:RACK1A "Guanine nucleotide-binding protein subunit
beta-like protein A" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0050832 "defense response to fungus" evidence=IMP] [GO:0060267
"positive regulation of respiratory burst" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005737 GO:GO:0009507 GO:GO:0046686
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0050832 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048364 GO:GO:0004871 GO:GO:0048367
GO:GO:0022626 EMBL:AP008207 EMBL:CM000138 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM ProtClustDB:CLSN2682135 EMBL:D38231
EMBL:AP003452 EMBL:AK060428 EMBL:AK098893 EMBL:AK121587 PIR:T03764
RefSeq:NP_001043910.1 UniGene:Os.4684 ProteinModelPortal:P49027
SMR:P49027 STRING:P49027 PRIDE:P49027
EnsemblPlants:LOC_Os01g49290.1 GeneID:4324115
KEGG:dosa:Os01t0686800-02 KEGG:osa:4324115 Gramene:P49027
GO:GO:0060267 Uniprot:P49027
Length = 334
Score = 215 (80.7 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 75/268 (27%), Positives = 136/268 (50%)
Query: 142 PMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
P + TGH ++V + S+DG+ +SGS GEL+ WD TG + GH K + +++
Sbjct: 67 PFRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRR-FVGHDKDVLSVAF 125
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSG-------HTLAVTCVKWGGDG-- 252
+ R+ VSAS+D ++W+ +L +C + G H V+CV++ +
Sbjct: 126 -----SVDNRQIVSASRDRTIKLWN-TLGECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQ 179
Query: 253 -VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSP 310
I +GS D T+KVW T KL L+GHG +VN++A+S + +L +G D +
Sbjct: 180 PTIVSGSWDRTVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLA 239
Query: 311 EEMKKAALERYNKIKGN--APER--LVSGSDDFTMFLWEPAVSK------QPKTRMTGHQ 360
E + +L+ + I +P R L + + D ++ +W+ SK +P+ ++ +Q
Sbjct: 240 EGKRLYSLDAGSIIHSLCFSPNRYWLCAATQD-SIKIWD-LESKHIVQDLKPEIPVSKNQ 297
Query: 361 QLV-NHVYFSPDGQWVASASFDKSIKLW 387
L + +S DG + + D +I+++
Sbjct: 298 MLYCTSLNWSADGSTLYAGYTDGTIRIY 325
Score = 212 (79.7 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 58/193 (30%), Positives = 91/193 (47%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D +RLWDL+T + GH VL +A+S D +
Sbjct: 71 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSVDNR 130
Query: 164 HLVSGSKAGELQCWDP--QTGKPSGNPLSG---HKKWITGISWEPVHLNAPCRRFVSASK 218
+VS S+ ++ W+ + G L G H W++ + + P N VS S
Sbjct: 131 QIVSASRDRTIKLWNTLGECKYTIGGDLGGGEGHNGWVSCVRFSP---NTFQPTIVSGSW 187
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIREL 277
D ++W+++ K L GH V V DG + +G +D +W+ +GK + L
Sbjct: 188 DRTVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLAEGKRLYSL 247
Query: 278 KGHGHWVNSLALS 290
G ++SL S
Sbjct: 248 DA-GSIIHSLCFS 259
Score = 144 (55.7 bits), Expect = 6.8e-17, Sum P(2) = 6.8e-17
Identities = 46/165 (27%), Positives = 78/165 (47%)
Query: 106 GHTEAVLSVAFSPDGRQ-LASGSGDTTVRLWDLNTQT--------------PMFKCTGHK 150
GH + V ++A D + S S D ++ +WDL P + TGH
Sbjct: 16 GHNDVVTAIATPIDNSPFIVSSSRDKSLLVWDLTNPVQNVGEGAGASEYGVPFRRLTGHS 75
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPC 210
++V + S+DG+ +SGS GEL+ WD TG + GH K + +++ +
Sbjct: 76 HFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRR-FVGHDKDVLSVAF-----SVDN 129
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSG-------HTLAVTCVKW 248
R+ VSAS+D ++W+ +L +C + G H V+CV++
Sbjct: 130 RQIVSASRDRTIKLWN-TLGECKYTIGGDLGGGEGHNGWVSCVRF 173
Score = 144 (55.7 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 42/144 (29%), Positives = 67/144 (46%)
Query: 356 MTGHQQLVNHVYFSPDGQ-WVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIY 414
M GH +V + D ++ S+S DKS+ +W+ T V G Y + F
Sbjct: 14 MHGHNDVVTAIATPIDNSPFIVSSSRDKSLLVWD-LTNPVQNVGEGAGASEYGVPFR--- 69
Query: 415 CFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEV 474
R + + V D+ S+D + LSGS D L++WD+ T + GH +V
Sbjct: 70 --RLTGHSHFVQDVVL-------SSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDV 120
Query: 475 FAVDWSPDGEKVASGGKDRVLKLW 498
+V +S D ++ S +DR +KLW
Sbjct: 121 LSVAFSVDNRQIVSASRDRTIKLW 144
Score = 136 (52.9 bits), Expect = 6.8e-17, Sum P(2) = 6.8e-17
Identities = 29/55 (52%), Positives = 36/55 (65%)
Query: 444 LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
++SGS D T+KVW++ KL+ +L GH V AV SPDG ASGGKD V LW
Sbjct: 182 IVSGSWDRTVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLW 236
Score = 124 (48.7 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 52/173 (30%), Positives = 77/173 (44%)
Query: 236 LSGHTLAVTCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
L+GH+ V V DG +GS D +++W+ + G R GH V S+A S +
Sbjct: 71 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSVDNR 130
Query: 295 -LRTGAFDHTGKQYSSPEEMKKAA---L---ERYN------KIKGNAPE-RLVSGSDDFT 340
+ + + D T K +++ E K L E +N + N + +VSGS D T
Sbjct: 131 QIVSASRDRTIKLWNTLGECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQPTIVSGSWDRT 190
Query: 341 MFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK 393
+ +W K + + GH VN V SPDG AS D LW+ GK
Sbjct: 191 VKVWNLTNCKL-RCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLAEGK 242
Score = 118 (46.6 bits), Expect = 0.00041, P = 0.00041
Identities = 57/225 (25%), Positives = 99/225 (44%)
Query: 271 GKLIRELKGHGHWVNSLALSTE--YALRTGAFDHTGKQYSSPEEMKKAALERYNK----I 324
G R L GH H+V + LS++ +AL +G++D + + + ++K +
Sbjct: 65 GVPFRRLTGHSHFVQDVVLSSDGQFAL-SGSWDGELRLWDLSTGVTTRRFVGHDKDVLSV 123
Query: 325 KGNAPER-LVSGSDDFTMFLWEPAVSKQPKT------RMTGHQQLVNHVYFSPDG--QWV 375
+ R +VS S D T+ LW + + T GH V+ V FSP+ +
Sbjct: 124 AFSVDNRQIVSASRDRTIKLWN-TLGECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQPTI 182
Query: 376 ASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF--ELIYCFRYPSNFYCVV-DMSCCM 432
S S+D+++K+WN T K GH G V + + C + ++ D++
Sbjct: 183 VSGSWDRTVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLAEGK 242
Query: 433 SLYSWSADS----------RLLLSGSKDSTLKVWDIRTQKLKQDL 467
LYS A S R L + ++K+WD+ ++ + QDL
Sbjct: 243 RLYSLDAGSIIHSLCFSPNRYWLCAATQDSIKIWDLESKHIVQDL 287
Score = 73 (30.8 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 16/62 (25%), Positives = 37/62 (59%)
Query: 444 LLSGSKDSTLKVWDIRT----QKLKQDLPGHADEVF---AVDWSPDGEKVASGGKDRVLK 496
L + ++DS +K+WD+ + Q LK ++P +++ +++WS DG + +G D ++
Sbjct: 265 LCAATQDS-IKIWDLESKHIVQDLKPEIPVSKNQMLYCTSLNWSADGSTLYAGYTDGTIR 323
Query: 497 LW 498
++
Sbjct: 324 IY 325
Score = 62 (26.9 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 428 MSCCMSLYSWSADSRLLLSGSKDSTLKVWDI 458
M C SL +WSAD L +G D T++++ I
Sbjct: 298 MLYCTSL-NWSADGSTLYAGYTDGTIRIYKI 327
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 252 (93.8 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 68/212 (32%), Positives = 109/212 (51%)
Query: 102 ATIAGHT-EAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
A I GH V VAF P GR LA+ D++ RLWDL +T + GH V C+++ +
Sbjct: 346 ADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHS 405
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG LV+G + WD +TG+ L GH + G+ + P + + S+D
Sbjct: 406 DGSVLVTGGLDAFGRVWDLRTGRCIMF-LEGHLGAVFGVDFSPNGFH-----IATGSQDN 459
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGD--GVIYTGSQDCTIKVWETTQGKLIRELK 278
+IWD+ R+ V + HT ++ VK+ + + T S D T K+W + ++ L+
Sbjct: 460 TCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQ 519
Query: 279 GHGHWVNS--LALSTEYALRTGAFDHTGKQYS 308
GH + V S +A +++Y + T +FD T K +S
Sbjct: 520 GHDNKVISVDIAPNSQY-IATTSFDRTFKLWS 550
Score = 206 (77.6 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 71/260 (27%), Positives = 116/260 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQ-------LASGSGDTTVRLWDLNTQTPMFKCTGHK-NWVL 154
T+ GH V VA P + +ASG D V+LW N + + TGH + V
Sbjct: 298 TLRGHASYVGGVALRPGVKADEENVVAMASGGHDGAVKLWGFNNEESIADITGHMPHRVS 357
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+A+ G+ L + + WD + K GH K + +S+ H + V
Sbjct: 358 KVAFHPSGRFLATACYDSSWRLWDLEQ-KTEVLHQEGHAKPVHCLSY---HSDGSV--LV 411
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKL 273
+ D R+WD+ +C++ L GH AV V + +G I TGSQD T K+W+ + +
Sbjct: 412 TGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQP 471
Query: 274 IRELKGHGHWVNSLALSTEYA--LRTGAFDHTGKQYSSPEEMKKAALERY-NKIKGN--A 328
+ + H + ++ + E L T ++D T K +S+ L+ + NK+ A
Sbjct: 472 VYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIA 531
Query: 329 P--ERLVSGSDDFTMFLWEP 346
P + + + S D T LW P
Sbjct: 532 PNSQYIATTSFDRTFKLWSP 551
Score = 172 (65.6 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 63/284 (22%), Positives = 123/284 (43%)
Query: 137 LNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWI 196
L + P+ G V A+S D L++ S +G + W + L GH ++
Sbjct: 248 LQSLAPLCSQVGDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELK-QTLRGHASYV 306
Query: 197 TGISWEPVHLNAPCRRFV---SASKDGDARIWDVSLRKCVICLSGHTL-AVTCVKWGGDG 252
G++ P + A V S DG ++W + + + ++GH V+ V + G
Sbjct: 307 GGVALRP-GVKADEENVVAMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSG 365
Query: 253 -VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSP 310
+ T D + ++W+ Q + +GH V+ L+ ++ + L TG D G+ +
Sbjct: 366 RFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLR 425
Query: 311 EEMKKAALERY-NKIKGN--APE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNH 365
LE + + G +P + +GS D T +W+ +QP + H L++
Sbjct: 426 TGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLR-RRQPVYTIPAHTNLISD 484
Query: 366 VYFSPD-GQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
V + + G ++ + S+D + K+W+ T + + +GH V +
Sbjct: 485 VKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISV 528
Score = 155 (59.6 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 35/114 (30%), Positives = 56/114 (49%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ +R RC + GH AV V FSP+G +A+GS D T ++WDL + P++ H
Sbjct: 421 VWDLR-TGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHT 479
Query: 151 NWVLCIAWSAD-GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
N + + + + G LV+ S + W +T +P L GH + + P
Sbjct: 480 NLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPL-KTLQGHDNKVISVDIAP 532
Score = 150 (57.9 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 48/196 (24%), Positives = 89/196 (45%)
Query: 320 RYNKIKGNAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASA 378
R +K+ + R L + D + LW+ K GH + V+ + + DG + +
Sbjct: 355 RVSKVAFHPSGRFLATACYDSSWRLWD-LEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTG 413
Query: 379 SFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFEL--IYCFRYPSNFYCVV-DMSCCMSLY 435
D ++W+ TG+ + GH+G V+ + F + + C + D+ +Y
Sbjct: 414 GLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVY 473
Query: 436 SWSADSRL-------------LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPD 482
+ A + L L++ S DST K+W +T + + L GH ++V +VD +P+
Sbjct: 474 TIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPN 533
Query: 483 GEKVASGGKDRVLKLW 498
+ +A+ DR KLW
Sbjct: 534 SQYIATTSFDRTFKLW 549
Score = 149 (57.5 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 61/277 (22%), Positives = 114/277 (41%)
Query: 238 GHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL-----ST 291
G T V+ + D ++ T S K+W +L + L+GH +V +AL +
Sbjct: 259 GDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKAD 318
Query: 292 E---YALRTGAFDHTGKQYSSPEEMKKAAL-----ERYNKIKGNAPER-LVSGSDDFTMF 342
E A+ +G D K + E A + R +K+ + R L + D +
Sbjct: 319 EENVVAMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWR 378
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
LW+ K GH + V+ + + DG + + D ++W+ TG+ + GH+
Sbjct: 379 LWD-LEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHL 437
Query: 403 GPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQK 462
G V+ + F P+ F+ + +GS+D+T K+WD+R ++
Sbjct: 438 GAVFGVDFS-------PNGFH--------------------IATGSQDNTCKIWDLRRRQ 470
Query: 463 LKQDLPGHADEVFAVDWSPD-GEKVASGGKDRVLKLW 498
+P H + + V + + G + + D K+W
Sbjct: 471 PVYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIW 507
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 201 (75.8 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 53/188 (28%), Positives = 86/188 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V A S D S S D T+RLWDL + GH + VL ++ S D +
Sbjct: 59 LTGHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNR 118
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ GH W++ + + P N FVSA D +
Sbjct: 119 QVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSP---NPDNLTFVSAGWDKAVK 175
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
+WD+ GHT V+ V DG + +G +D T+ +W+ + + L+ +
Sbjct: 176 VWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKAN 235
Query: 283 WVNSLALS 290
+N+L S
Sbjct: 236 -INALVFS 242
Score = 169 (64.5 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 41/133 (30%), Positives = 69/133 (51%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT--GHKNWVLCIA 157
C+ GHT VLSV+ SPD RQ+ SGS D T+++W++ + T GH +WV C+
Sbjct: 97 CTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNIIGNCK-YTITDGGHSDWVSCVR 155
Query: 158 WSADGKHL--VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+S + +L VS ++ WD +T + GH +++ ++ P + C S
Sbjct: 156 FSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHY-GHTGYVSAVTISPD--GSLC---AS 209
Query: 216 ASKDGDARIWDVS 228
+DG +WD++
Sbjct: 210 GGRDGTLMLWDLN 222
Score = 145 (56.1 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 68/263 (25%), Positives = 121/263 (46%)
Query: 236 LSGHTLAVTCVKWGGDG--VIYTGSQDCTIKVW-----ETTQGKLIRELKGHGHWVNSLA 288
L GH+ VT + + ++ +GS+D +I +W + G R L GH H+V+ A
Sbjct: 11 LEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCA 70
Query: 289 LS--TEYALRTGAFDHTGKQYSSPE-EMKKAALERYNKIKGNA--PE--RLVSGSDDFTM 341
LS + YAL + ++D T + + + E + + + + P+ ++VSGS D T+
Sbjct: 71 LSFDSHYAL-SASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTI 129
Query: 342 FLWEPAVSKQPKTRMT--GHQQLVNHVYFSP--DGQWVASASFDKSIKLWNGTTGKFVAV 397
+W + K +T GH V+ V FSP D SA +DK++K+W+ T
Sbjct: 130 KIWN--IIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTS 187
Query: 398 FRGHVGPVYQIRF--ELIYCFRYPSNFYCVV-DMSCCMSLYSWSADS----------RLL 444
GH G V + + C + ++ D++ LYS A + R
Sbjct: 188 HYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKANINALVFSPNRYW 247
Query: 445 LSGSKDSTLKVWDIRTQKLKQDL 467
L + S+++++D+ TQ+ +L
Sbjct: 248 LCAATGSSIRIFDLETQEKVDEL 270
Score = 144 (55.7 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 53/188 (28%), Positives = 81/188 (43%)
Query: 97 VNRCSATIA--GHTEAVLSVAFSP--DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNW 152
+ C TI GH++ V V FSP D S D V++WDL T + GH +
Sbjct: 135 IGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGY 194
Query: 153 VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRR 212
V + S DG SG + G L WD + L K I + + P N R
Sbjct: 195 VSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYS-LEA-KANINALVFSP---N---RY 246
Query: 213 FVSASKDGDARIWDVSLRKCVICLSGHTLAV-------TCVK--WGGDG-VIYTGSQDCT 262
++ A+ RI+D+ ++ V L+ + V C+ W DG +++G D
Sbjct: 247 WLCAATGSSIRIFDLETQEKVDELTVDFVGVGKKSSEPECISLTWSPDGQTLFSGWTDNL 306
Query: 263 IKVWETTQ 270
I+VW+ T+
Sbjct: 307 IRVWQVTK 314
Score = 132 (51.5 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 438 SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKL 497
S DS LS S D T+++WD+ + GH +V +V SPD +V SG +D+ +K+
Sbjct: 72 SFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKI 131
Query: 498 W 498
W
Sbjct: 132 W 132
Score = 130 (50.8 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 54/215 (25%), Positives = 95/215 (44%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW-----DVSLRKCVICLSGHTLAV 243
L GH W+T +S P + + +S S+D +W DV+ L+GH+ V
Sbjct: 11 LEGHSGWVTSLSTAPENPDI----LLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFV 66
Query: 244 T-CVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+ C + S D TI++W+ +G+ + GH V S+++S + + +G+ D
Sbjct: 67 SDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRD 126
Query: 302 HTGKQYSSPEEMKKAALERYNK-----IKGNA-PERL--VSGSDDFTMFLWEPAVSKQPK 353
T K ++ K + + ++ + P+ L VS D + +W+ +
Sbjct: 127 KTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSL-R 185
Query: 354 TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
T GH V+ V SPDG AS D ++ LW+
Sbjct: 186 TSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWD 220
Score = 128 (50.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 29/72 (40%), Positives = 38/72 (52%)
Query: 427 DMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKV 486
D C+ +S + D+ +S D +KVWD+ T L+ GH V AV SPDG
Sbjct: 149 DWVSCVR-FSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSLC 207
Query: 487 ASGGKDRVLKLW 498
ASGG+D L LW
Sbjct: 208 ASGGRDGTLMLW 219
Score = 82 (33.9 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 19/67 (28%), Positives = 36/67 (53%)
Query: 441 SRLLLSGSKDSTLKVWDIRTQK----LKQDLPG-----HADEVFAVDWSPDGEKVASGGK 491
+R L + S+++++D+ TQ+ L D G E ++ WSPDG+ + SG
Sbjct: 244 NRYWLCAATGSSIRIFDLETQEKVDELTVDFVGVGKKSSEPECISLTWSPDGQTLFSGWT 303
Query: 492 DRVLKLW 498
D ++++W
Sbjct: 304 DNLIRVW 310
Score = 68 (29.0 bits), Expect = 4.9e-17, Sum P(2) = 4.9e-17
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKVWDI 458
C+SL +WS D + L SG D+ ++VW +
Sbjct: 286 CISL-TWSPDGQTLFSGWTDNLIRVWQV 312
Score = 49 (22.3 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 368 FSPDGQWVASASFDKSIKLWNGT 390
+SPDGQ + S D I++W T
Sbjct: 291 WSPDGQTLFSGWTDNLIRVWQVT 313
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 229 (85.7 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 58/192 (30%), Positives = 94/192 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH V+SV SP G +AS S D +RLWDL + + +A+S D +
Sbjct: 60 LEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQ 119
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
HL +GS G++ + +TGK + L K+I I++ P + S + DG
Sbjct: 120 HLATGSHVGKVNIFGVETGKKEYS-LDTRGKFILSIAYSP-----DGKYLASGAIDGIIN 173
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
I+D++ K + L GH + + + + D ++ T S D IK+++ L L GHG
Sbjct: 174 IFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGS 233
Query: 283 WVNSLALSTEYA 294
WV ++A S + A
Sbjct: 234 WVLNVAFSPDDA 245
Score = 210 (79.0 bits), Expect = 5.3e-15, P = 5.3e-15
Identities = 51/158 (32%), Positives = 83/158 (52%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
+LS+A+SPDG+ LASG+ D + ++D+ T + GH + + +S D + LV+ S
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASD 210
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR 230
G ++ +D Q + LSGH W+ +++ P + FVS+S D ++WDVS R
Sbjct: 211 DGYIKIYDVQHASLAAT-LSGHGSWVLNVAFSPDDAH-----FVSSSSDKSVKVWDVSAR 264
Query: 231 KCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
CV H V VK+ +G I + D I V++
Sbjct: 265 TCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVYD 302
Score = 158 (60.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 72/291 (24%), Positives = 126/291 (43%)
Query: 137 LNTQ-TPMFKCT-GHKNWVLCIAW---SADGKHLV-SGSKAGELQCWDPQTGKPSGN-PL 189
++TQ + +FK H++ + + W S DG LV SGS ++ W + L
Sbjct: 1 MSTQYSILFKQEHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLEMQWAL 60
Query: 190 SGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG 249
GH+ + + P N S+S D R+WD+ K + + + V +
Sbjct: 61 EGHQLGVVSVDVSPSG-NI----MASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFS 115
Query: 250 GDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDH----- 302
D + TGS + ++ GK L G ++ S+A S + L +GA D
Sbjct: 116 PDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 303 ---TGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGH 359
TGK + ++ A+ + + LV+ SDD + +++ + T ++GH
Sbjct: 176 DIATGKLLHT---LEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAAT-LSGH 231
Query: 360 QQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
V +V FSPD S+S DKS+K+W+ + V F H V+ +++
Sbjct: 232 GSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKY 282
Score = 148 (57.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 40/148 (27%), Positives = 70/148 (47%)
Query: 366 VYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF----ELIYCFRYPS- 420
+ +SPDG+++AS + D I +++ TGK + GH P+ + F +L+
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGY 213
Query: 421 -NFYCVVDMSCCMSLY---SW------SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGH 470
Y V S +L SW S D +S S D ++KVWD+ + H
Sbjct: 214 IKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFLDH 273
Query: 471 ADEVFAVDWSPDGEKVASGGKDRVLKLW 498
D+V+ V ++ +G K+ S G D+ + ++
Sbjct: 274 QDQVWGVKYNRNGSKIVSVGDDQEIHVY 301
Score = 141 (54.7 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 32/124 (25%), Positives = 60/124 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ FS D + L + S D ++++D+ + +GH +WVL +A+S D
Sbjct: 185 TLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDD 244
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H VS S ++ WD + + + H+ + G+ + N + VS D +
Sbjct: 245 AHFVSSSSDKSVKVWDV-SARTCVHTFLDHQDQVWGVKY-----NRNGSKIVSVGDDQEI 298
Query: 223 RIWD 226
++D
Sbjct: 299 HVYD 302
Score = 135 (52.6 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 77 SVEKVLSIVYQPQAVFRIRPVNRCS--ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRL 134
S + L + +I V S AT++GH VL+VAFSPD S S D +V++
Sbjct: 199 STDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKV 258
Query: 135 WDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
WD++ +T + H++ V + ++ +G +VS E+ +D
Sbjct: 259 WDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVYD 302
Score = 118 (46.6 bits), Expect = 0.00034, P = 0.00034
Identities = 46/184 (25%), Positives = 80/184 (43%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+ S S D + LW+ KQ ++ G + V FSPD Q +A+ S + ++ T
Sbjct: 79 MASSSLDAHIRLWDLESGKQIRSIDAGPVDAWS-VAFSPDSQHLATGSHVGKVNIFGVET 137
Query: 392 GK--FVAVFRGHVGPVYQIRFE-------------LIYCFRYPSN--FYCVVDMSCCMSL 434
GK + RG + I + +I F + + + + +
Sbjct: 138 GKKEYSLDTRGKF--ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRS 195
Query: 435 YSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
++S DS+LL++ S D +K++D++ L L GH V V +SPD S D+
Sbjct: 196 LTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKS 255
Query: 495 LKLW 498
+K+W
Sbjct: 256 VKVW 259
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 231 (86.4 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 81/313 (25%), Positives = 136/313 (43%)
Query: 89 QAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC-T 147
QA R+ + ++GH+ + F+ G+ +ASGS D ++ LW N + +
Sbjct: 41 QAAPRLSSLQAPLMELSGHSGEIFCAKFNSAGQYIASGSMDRSILLWRANGDCENYGILS 100
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLN 207
GH+ +L + WS D + S S L WD TG+ + GH++ I + +
Sbjct: 101 GHRGAILDLQWSRDSDIIFSASADMHLASWDLTTGERIRRYV-GHEEVINSLD---ISKR 156
Query: 208 APCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVW 266
F S S DG IWD + + VT V G IY+G D IKVW
Sbjct: 157 GEEILF-SGSDDGTIGIWDPRKKHAADYIESD-FPVTAVAISEAGNEIYSGGIDNDIKVW 214
Query: 267 ETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYS----SPEEMKKAALE-- 319
+ + ++ + GH + +L +S + +L + A D T + + +P E +
Sbjct: 215 DVRKKAVVYNMAGHRDTITTLKVSPDSQSLLSYAMDSTARTWDIRPFAPTERHIRTFDGA 274
Query: 320 ----RYNKIKGN---APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
N ++G +R+ G+ D T+ +W K ++ GH+ VN V FSP
Sbjct: 275 PMGIEKNLVRGGWDKEGKRVAMGAADGTVVIWSNETGKLTY-KLPGHKAAVNCVEFSPGT 333
Query: 373 Q-WVASASFDKSI 384
+ + S S DK++
Sbjct: 334 EPLILSGSSDKTL 346
Score = 162 (62.1 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 45/167 (26%), Positives = 76/167 (45%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
V +VA S G ++ SG D +++WD+ + ++ GH++ + + S D + L+S +
Sbjct: 190 VTAVAISEAGNEIYSGGIDNDIKVWDVRKKAVVYNMAGHRDTITTLKVSPDSQSLLSYAM 249
Query: 171 AGELQCWDPQTGKPS--------GNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ WD + P+ G P+ K + G W+ +R + DG
Sbjct: 250 DSTARTWDIRPFAPTERHIRTFDGAPMGIEKNLVRG-GWDKEG-----KRVAMGAADGTV 303
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDCTIKVWE 267
IW K L GH AV CV++ G + +I +GS D T+ V E
Sbjct: 304 VIWSNETGKLTYKLPGHKAAVNCVEFSPGTEPLILSGSSDKTLLVGE 350
Score = 149 (57.5 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 65/292 (22%), Positives = 124/292 (42%)
Query: 140 QTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
Q P+ + +GH + C +++ G+++ SGS + W + LSGH+ I +
Sbjct: 50 QAPLMELSGHSGEIFCAKFNSAGQYIASGSMDRSILLWRANGDCENYGILSGHRGAILDL 109
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTC--VKWGGDGVIYTG 257
W + SAS D WD++ + + GH + + G+ ++++G
Sbjct: 110 QW-----SRDSDIIFSASADMHLASWDLTTGERIRRYVGHEEVINSLDISKRGEEILFSG 164
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKA 316
S D TI +W+ + K + V ++A+S + +G D+ K + + KKA
Sbjct: 165 SDDGTIGIWDPRK-KHAADYIESDFPVTAVAISEAGNEIYSGGIDNDIKVW---DVRKKA 220
Query: 317 ALERYNKIKGN---------APER--LVSGSDDFTMFLWE--PAVSKQPKTRM-----TG 358
+ YN + G+ +P+ L+S + D T W+ P + R G
Sbjct: 221 VV--YN-MAGHRDTITTLKVSPDSQSLLSYAMDSTARTWDIRPFAPTERHIRTFDGAPMG 277
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
++ + + +G+ VA + D ++ +W+ TGK GH V + F
Sbjct: 278 IEKNLVRGGWDKEGKRVAMGAADGTVVIWSNETGKLTYKLPGHKAAVNCVEF 329
Score = 138 (53.6 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 41/187 (21%), Positives = 83/187 (44%)
Query: 327 NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
+A + + SGS D ++ LW + ++GH+ + + +S D + SAS D +
Sbjct: 70 SAGQYIASGSMDRSILLWRANGDCENYGILSGHRGAILDLQWSRDSDIIFSASADMHLAS 129
Query: 387 WNGTTGKFVAVFRGHVGPVYQIRF-----ELIYC--------FRYPSNFYCV--VDMSCC 431
W+ TTG+ + + GH + + E+++ P + ++
Sbjct: 130 WDLTTGERIRRYVGHEEVINSLDISKRGEEILFSGSDDGTIGIWDPRKKHAADYIESDFP 189
Query: 432 MSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGK 491
++ + S + SG D+ +KVWD+R + + ++ GH D + + SPD + + S
Sbjct: 190 VTAVAISEAGNEIYSGGIDNDIKVWDVRKKAVVYNMAGHRDTITTLKVSPDSQSLLSYAM 249
Query: 492 DRVLKLW 498
D + W
Sbjct: 250 DSTARTW 256
Score = 48 (22.0 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 10/17 (58%), Positives = 13/17 (76%)
Query: 443 LLLSGSKDSTLKVWDIR 459
L+LSGS D TL V ++R
Sbjct: 336 LILSGSSDKTLLVGELR 352
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 240 (89.5 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 80 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 139
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 140 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 193
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 194 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 253
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 254 TIKMWDVSTGMCLMTLVGHDNWVRGV 279
Score = 233 (87.1 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 79/272 (29%), Positives = 124/272 (45%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
LSGH VT V + V+ + S+D TIKVW+ G R LKGH V ++ +
Sbjct: 39 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 98
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYN----KIKGNAPERLVSGSDDFTMFLWEPA 347
L + + D T K + E ++ +N I N + +VS S D T+ +WE
Sbjct: 99 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 157
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
KT TGH++ V V + DG +AS S D+++++W T + A R H
Sbjct: 158 TGYCVKT-FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE----- 211
Query: 408 IRFELIYCFRY-PSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQD 466
++ C + P + Y + + LLSGS+D T+K+WD+ T
Sbjct: 212 ---HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 268
Query: 467 LPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L GH + V V + G+ + S D+ L++W
Sbjct: 269 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 300
Score = 227 (85.0 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 119 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 178
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 179 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 237
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 238 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 297
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 298 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 340
Score = 195 (73.7 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 39 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 98
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 99 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 152
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 153 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 212
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 213 VVECISWAPE 222
Score = 194 (73.4 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 57/189 (30%), Positives = 87/189 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T GH E V V + DG +AS S D TVR+W + T+ + H++ V CI+W+
Sbjct: 161 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 220
Query: 160 AD--------------------GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ G L+SGS+ ++ WD TG L GH W+ G+
Sbjct: 221 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGV 279
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGS 258
+ H + +S + D R+WD ++C+ L+ H VT + + + TGS
Sbjct: 280 LF---HSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 334
Query: 259 QDCTIKVWE 267
D T+KVWE
Sbjct: 335 VDQTVKVWE 343
Score = 156 (60.0 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 46/168 (27%), Positives = 79/168 (47%)
Query: 348 VSKQP-KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVY 406
+ + P K ++GH+ V V F P + SAS D +IK+W+ TG F +GH V
Sbjct: 30 IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQ 89
Query: 407 QIRFE-----LIYCFRYPS-------NFYCVVDM---SCCMSLYSWSADSRLLLSGSKDS 451
I F+ L C + F C+ M +S + + ++S S+D
Sbjct: 90 DISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDK 149
Query: 452 TLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLWM 499
T+K+W+++T + GH + V V + DG +AS D+ +++W+
Sbjct: 150 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 197
Score = 151 (58.2 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 37 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 94
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 95 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 149
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 150 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 209
Query: 321 YNKI 324
+ +
Sbjct: 210 HEHV 213
Score = 74 (31.1 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 32/132 (24%), Positives = 58/132 (43%)
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W P S + TG + + P G ++ S S DK+IK+W+ +TG + GH
Sbjct: 219 WAPESSYSSISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 274
Query: 404 PVYQIRFE-----LIYC--------FRYPSNFYCVVDMSC---CMSLYSWSADSRLLLSG 447
V + F ++ C + Y N C+ ++ ++ + + +++G
Sbjct: 275 WVRGVLFHSGGKFILSCADDKTLRVWDY-KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 333
Query: 448 SKDSTLKVWDIR 459
S D T+KVW+ R
Sbjct: 334 SVDQTVKVWECR 345
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 253 (94.1 bits), Expect = 3.3e-18, P = 3.3e-18
Identities = 65/157 (41%), Positives = 80/157 (50%)
Query: 71 LEKHKVSVEKVLSIVYQPQAVFRIRPVN-RCSATIAGHTEAVLSVAFSPDGRQLASGSGD 129
LE H SV VL+ + V P T+ GH+ VLSVAFSPDGR LASGS D
Sbjct: 699 LEGHSNSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFD 758
Query: 130 TTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPL 189
TVRLWD T + GH NWV +A+S DG+ L SGS ++ WDP TG L
Sbjct: 759 KTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQ-QTL 817
Query: 190 SGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD 226
GH + +++ P R S S D R+WD
Sbjct: 818 RGHSDTVRSVAFSP-----DGRLLASGSFDKTVRLWD 849
Score = 204 (76.9 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 57/193 (29%), Positives = 98/193 (50%)
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD 251
++KW + H N+ S S D R+WD + L GH+ V V + D
Sbjct: 689 NEKWGAELQTLEGHSNSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPD 748
Query: 252 G-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSS 309
G ++ +GS D T+++W+ G L + L+GH +WV S+A S + L +G+FD T + +
Sbjct: 749 GRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDP 808
Query: 310 PEEMKKAALERYNK-IKGNA--PE-RLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
+ L ++ ++ A P+ RL+ SGS D T+ LW+PA +T + + V
Sbjct: 809 ATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGTLQQTLII--KGTVT 866
Query: 365 HVYFSPDGQWVAS 377
+ FS DG ++++
Sbjct: 867 ELQFSQDGSYIST 879
Score = 202 (76.2 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 60/172 (34%), Positives = 85/172 (49%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L SGSDD T+ LW+PA +T + GH V V FSPDG+ +AS SFDK+++LW+ T
Sbjct: 710 LASGSDDETVRLWDPATGSLQQT-LEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPAT 768
Query: 392 GKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDM------SCCMSL---------YS 436
G RGH V + F +F V + S +L +
Sbjct: 769 GSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVA 828
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVAS 488
+S D RLL SGS D T+++WD T L+Q L V + +S DG +++
Sbjct: 829 FSPDGRLLASGSFDKTVRLWDPATGTLQQTLIIKGT-VTELQFSQDGSYIST 879
Score = 194 (73.4 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 42/80 (52%), Positives = 51/80 (63%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH+ V SVAFSPDGR LASGS D TVRLWD T + GH + V +A+S DG
Sbjct: 774 TLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDG 833
Query: 163 KHLVSGSKAGELQCWDPQTG 182
+ L SGS ++ WDP TG
Sbjct: 834 RLLASGSFDKTVRLWDPATG 853
Score = 180 (68.4 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 49/139 (35%), Positives = 71/139 (51%)
Query: 375 VASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDM------ 428
+AS S D++++LW+ TG GH G V + F +F V +
Sbjct: 710 LASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATG 769
Query: 429 SCCMSLY---SW------SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDW 479
S +L +W S D RLL SGS D T+++WD T L+Q L GH+D V +V +
Sbjct: 770 SLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAF 829
Query: 480 SPDGEKVASGGKDRVLKLW 498
SPDG +ASG D+ ++LW
Sbjct: 830 SPDGRLLASGSFDKTVRLW 848
Score = 144 (55.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 43/116 (37%), Positives = 60/116 (51%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH++ V SVAFSPDGR LASGS D TVRLWD T T + + K V + +S DG
Sbjct: 816 TLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATGT-LQQTLIIKGTVTELQFSQDG 874
Query: 163 KHLVS--GSKAGELQCWDPQTGKPS--GNPLSGHKKWIT--G--ISWEPVHLNAPC 210
++ + GS + +C + + P + L WI+ G + W P C
Sbjct: 875 SYISTNLGSLNIQSRCGNNLSSSPKMHSDILINGPDWISVNGREVLWLPPEARPSC 930
Score = 138 (53.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 443 LLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+L SGS D T+++WD T L+Q L GH+ V +V +SPDG +ASG D+ ++LW
Sbjct: 709 VLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLW 764
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 250 (93.1 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 63/196 (32%), Positives = 98/196 (50%)
Query: 104 IAGHTEAVLSVAFSPD-GRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H+ V S+ GR LA+G D V +W +N + TGH + + SA
Sbjct: 16 IVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKE 75
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S D D
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKIL-RTLLGHKANICSLDFHPYG------SFVASGSLDTD 128
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WDV + C+ HT AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 129 IKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGH 188
Query: 281 GHWVNSLALS-TEYAL 295
VN + +EY L
Sbjct: 189 YGPVNVVEFHPSEYPL 204
Score = 197 (74.4 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 56/205 (27%), Positives = 92/205 (44%)
Query: 71 LEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSA--TIAGHTEAVLSVAFSPDGRQLASGSG 128
+E ++S ++ L + R+ + T+ GH + S+ F P G +ASGS
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSL 125
Query: 129 DTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNP 188
DT ++LWD+ + +FK H V C+ +S DGK L S + ++ WD GK
Sbjct: 126 DTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFE- 184
Query: 189 LSGHKKWITGISWEPVHL---NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTC 245
+GH + + + P +P R + R WD+ V C+ V C
Sbjct: 185 FTGHYGPVNVVEFHPSEYPLAGSPVHRTI--------RFWDLEKFHVVSCIEEEATPVRC 236
Query: 246 VKWGGDGV-IYTGSQDCTIKV--WE 267
+ + DG +Y G QD +++V WE
Sbjct: 237 ILFNPDGCCLYGGFQD-SLRVYGWE 260
Score = 181 (68.8 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 54/166 (32%), Positives = 76/166 (45%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEE 312
++ TG DC + VW + + L GH + SL +S + L A +G E
Sbjct: 35 LLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIV-AGSQSGSIRVWDLE 93
Query: 313 MKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVN 364
K L K N P + SGS D + LW+ K + H Q V
Sbjct: 94 AAKI-LRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVR-RKGCIFKYKSHTQAVR 151
Query: 365 HVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+ FSPDG+W+ASA+ D ++KLW+ T GK + F GH GPV + F
Sbjct: 152 CLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEF 197
Score = 144 (55.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 48/232 (20%), Positives = 96/232 (41%)
Query: 97 VNR--CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
VN+ C ++ GHT + S+ S + +GS ++R+WDL + GHK +
Sbjct: 50 VNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANIC 109
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+ + G + SGS +++ WD + K H + + + + P +
Sbjct: 110 SLDFHPYGSFVASGSLDTDIKLWDVRR-KGCIFKYKSHTQAVRCLRFSP-----DGKWLA 163
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQ-DCTIKVWETTQGKL 273
SA+ D ++WD++ K + +GH V V++ GS TI+ W+ + +
Sbjct: 164 SAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSEYPLAGSPVHRTIRFWDLEKFHV 223
Query: 274 IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERYNKI 324
+ ++ V + + + G F + + Y PE + + K+
Sbjct: 224 VSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWEPERCFDVVVVNWGKV 275
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 438 SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKL 497
SA L+++GS+ +++VWD+ K+ + L GH + ++D+ P G VASG D +KL
Sbjct: 72 SAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKL 131
Query: 498 W 498
W
Sbjct: 132 W 132
>TAIR|locus:2012971 [details] [associations]
symbol:AT1G71840 "AT1G71840" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000261676 OMA:VWSFEVG HSSP:P16649
EMBL:AY080732 EMBL:BT001964 IPI:IPI00538190 RefSeq:NP_177329.2
UniGene:At.44000 ProteinModelPortal:Q8RXQ4 SMR:Q8RXQ4 IntAct:Q8RXQ4
PRIDE:Q8RXQ4 EnsemblPlants:AT1G71840.1 GeneID:843514
KEGG:ath:AT1G71840 TAIR:At1g71840 InParanoid:Q8RXQ4
PhylomeDB:Q8RXQ4 ProtClustDB:CLSN2680639 ArrayExpress:Q8RXQ4
Genevestigator:Q8RXQ4 Uniprot:Q8RXQ4
Length = 407
Score = 244 (91.0 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 84/322 (26%), Positives = 141/322 (43%)
Query: 103 TIAGHTEAVLSVAFSP-DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
T GH + ++A SP D +A+G GD LW + + GHK+ V C+A+S D
Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYD 124
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV-HLNAPCRRFVSASKDG 220
G+ L SG G +Q +D +G L G I + W P H+ ++ S+D
Sbjct: 125 GQLLASGGLDGVVQIFDASSGTLKC-VLDGPGAGIEWVRWHPRGHI------VLAGSEDC 177
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
+W+ + SGH L VTC + DG +I TGS D ++ VW + I +KG
Sbjct: 178 SLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKG 237
Query: 280 HGHWVNSLA---LSTEYALR-TGAFD---H-----TGKQYSS-PEEMKKAALERYNKIKG 326
H + L +++ +L +G+ D H TGK SS +++
Sbjct: 238 HPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSA 297
Query: 327 NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
P G D + +W+ S P+ + H++ V + + +++A+ + ++ +
Sbjct: 298 TIPLAATGGMDK-KLIIWDLQHST-PRF-ICEHEEGVTSLTWIGTSKYLATGCANGTVSI 354
Query: 387 WNGTTGKFVAVFRGHVGPVYQI 408
W+ G V + GH V I
Sbjct: 355 WDSLLGNCVHTYHGHQDAVQAI 376
Score = 180 (68.4 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 70/305 (22%), Positives = 131/305 (42%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT--GHKNWVLCIAW 158
+A + GH ++V +AFS DG+ LASG D V+++D ++ T KC G + + W
Sbjct: 106 AAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGT--LKCVLDGPGAGIEWVRW 163
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
G +++GS+ L W+ + N SGH +T + P + + S
Sbjct: 164 HPRGHIVLAGSEDCSLWMWNADK-EAYLNMFSGHNLNVTCGDFTP-----DGKLICTGSD 217
Query: 219 DGDARIWDVSLRKCVICLSGH---TLAVTCVKWGGDGVI-YTGSQDCTIKVWETTQGKLI 274
D +W+ + + + GH T +TC+ + + +GS+D ++ + GK++
Sbjct: 218 DASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVV 277
Query: 275 RELKGHGHWVNSLALSTEYAL----RTGAFDHT----GKQYSSPEEMKKAALERYNKIKG 326
L H V + S A TG D Q+S+P + + E +
Sbjct: 278 SSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRFICEHE-EGVTSLTW 336
Query: 327 NAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
+ L +G + T+ +W+ + T GHQ V + S + ++ S S D + +
Sbjct: 337 IGTSKYLATGCANGTVSIWDSLLGNCVHT-YHGHQDAVQAISVSTNTDFIVSVSVDNTAR 395
Query: 386 LWNGT 390
++ +
Sbjct: 396 VFESS 400
Score = 127 (49.8 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 60/277 (21%), Positives = 110/277 (39%)
Query: 1 MEIETETTNNVMCLLTDPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAFYISD 60
++I ++ + C+L P G + + P+ S+ + + N +K Y S
Sbjct: 137 VQIFDASSGTLKCVLDGP-GAGIEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFSG 195
Query: 61 HELLVPLGSYLEKHKV---SVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFS 117
H L V G + K+ + IV+ P+ I V HTE + + +
Sbjct: 196 HNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPY----HTEGLTCLDIN 251
Query: 118 PDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAG---EL 174
+ SGS D +V + ++ T + H + V C+ +S + + G +L
Sbjct: 252 SNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKL 311
Query: 175 QCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVI 234
WD Q P + H++ +T ++W + + +G IWD L CV
Sbjct: 312 IIWDLQHSTPRF--ICEHEEGVTSLTWI-----GTSKYLATGCANGTVSIWDSLLGNCVH 364
Query: 235 CLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQ 270
GH AV + + I + S D T +V+E+++
Sbjct: 365 TYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFESSE 401
Score = 118 (46.6 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 49/236 (20%), Positives = 102/236 (43%)
Query: 185 SGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVT 244
S + +GHK + ++ P + D A +W + L GH +V+
Sbjct: 62 SVHTFTGHKGELYALACSPTDATL----VATGGGDDKAFLWKIGNGDWAAELPGHKDSVS 117
Query: 245 CVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDH 302
C+ + DG ++ +G D +++++ + G L L G G + + + + G+ D
Sbjct: 118 CLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDC 177
Query: 303 TGKQYSSPEE--MKKAALERYNKIKGN-APE-RLV-SGSDDFTMFLWEPAVSKQPKTRMT 357
+ +++ +E + + N G+ P+ +L+ +GSDD ++ +W P + +
Sbjct: 178 SLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHI-VK 236
Query: 358 GHQ---QLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
GH + + + + + S S D S+ + N TGK V+ H V ++F
Sbjct: 237 GHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKF 292
Score = 70 (29.7 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 15/63 (23%), Positives = 28/63 (44%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
+W S+ L +G + T+ +WD GH D V A+ S + + + S D
Sbjct: 335 TWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTA 394
Query: 496 KLW 498
+++
Sbjct: 395 RVF 397
Score = 64 (27.6 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 15/68 (22%), Positives = 31/68 (45%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 490
C+ SA L +G D L +WD++ + + H + V ++ W + +A+G
Sbjct: 289 CVKFSPSSATIPLAATGGMDKKLIIWDLQ-HSTPRFICEHEEGVTSLTWIGTSKYLATGC 347
Query: 491 KDRVLKLW 498
+ + +W
Sbjct: 348 ANGTVSIW 355
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 210 (79.0 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 57/197 (28%), Positives = 94/197 (47%)
Query: 97 VNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI 156
+ ++ GH++A+ V+ S DG SGS D +VRLWDL+ + GH + V +
Sbjct: 61 IGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSV 120
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
++S D + +VS S+ ++ W+ H WIT + + P A VS
Sbjct: 121 SFSPDNRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAI---IVSC 177
Query: 217 SKDGDARIWDVSLRKCVIC--LSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKL 273
D ++W+ L+ C + L GHT + V DG + +G +D K+W+ +GK
Sbjct: 178 GWDKLVKVWN--LKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKH 235
Query: 274 IRELKGHGHWVNSLALS 290
+ L+ G +NSL S
Sbjct: 236 LYSLET-GSTINSLCFS 251
Score = 202 (76.2 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 76/283 (26%), Positives = 128/283 (45%)
Query: 148 GHKNWVLCIAWSADGK--HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW--EP 203
GH +WV ++ D K +VS S+ +L W+ T SG + KK +TG S
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGE-IGTAKKSLTGHSQAIND 77
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
V +++ +S S D R+WD+SL + + GHT V V + D I + S+D T
Sbjct: 78 VSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKT 137
Query: 263 IKVWET-TQGKLIRELKGHGHWVNSLALS---TEYALRTGAFDHTGKQYSSPE-EMKKAA 317
IK+W T Q K + H W+ + S + + + +D K ++ ++ K
Sbjct: 138 IKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKN- 196
Query: 318 LERYNKIKGN---APERLV--SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
LE + + +P+ + SG D LW+ K + TG +N + FSP
Sbjct: 197 LEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETG--STINSLCFSPCD 254
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYC 415
W+ +A+ D+ I++WN K + + PV Q + + +C
Sbjct: 255 YWLCAAT-DRFIRIWN-LESKLII---SEIYPVKQSKIGVPWC 292
Score = 189 (71.6 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 61/229 (26%), Positives = 110/229 (48%)
Query: 106 GHTEAVLSVAFSPDGR--QLASGSGDTTVRLWDLNTQ-------TPMFKCTGHKNWVLCI 156
GH++ V SV+ D + + S S D + +W++NT T TGH + +
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
+ S+DG +SGS ++ WD G+ + + GH + +S+ P + R+ VSA
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFI-GHTSDVFSVSFSPDN-----RQIVSA 132
Query: 217 SKDGDARIWDVSLRKCVICLSG--HTLAVTCVKWG---GDGVIYTGSQDCTIKVWETTQG 271
S+D ++W+ +L +C ++ HT +TCV++ +I + D +KVW
Sbjct: 133 SRDKTIKLWN-TLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNC 191
Query: 272 KLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALE 319
L + L+GH +N++ +S + +L +G D K + E +LE
Sbjct: 192 DLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLE 240
Score = 135 (52.6 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 50/181 (27%), Positives = 79/181 (43%)
Query: 99 RCSATIAG--HTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
+C TI HT+ + V FSP Q + S D V++W+L GH +
Sbjct: 146 QCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLN 205
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+ S DG SG K G + WD + GK + +G I + + +PC ++
Sbjct: 206 TVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGST--INSLCF------SPCDYWL 257
Query: 215 SASKDGDARIWDVSLRKCVIC----LSGHTLAV---TCVKWGGDG-VIYTGSQDCTIKVW 266
A+ D RIW++ K +I + + V T + W +G ++Y GS D I V+
Sbjct: 258 CAATDRFIRIWNLE-SKLIISEIYPVKQSKIGVPWCTSLTWSANGQLLYCGSTDGNIYVY 316
Query: 267 E 267
E
Sbjct: 317 E 317
Score = 133 (51.9 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
S S+D LSGS D ++++WD+ + + GH +VF+V +SPD ++ S +D+ +
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTI 138
Query: 496 KLW 498
KLW
Sbjct: 139 KLW 141
Score = 128 (50.1 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 427 DMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKV 486
D C+ +S S + +++S D +KVW+++ L ++L GH + V SPDG
Sbjct: 158 DWITCVR-FSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLC 216
Query: 487 ASGGKDRVLKLW 498
ASGGKD V KLW
Sbjct: 217 ASGGKDGVAKLW 228
Score = 68 (29.0 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 405 VYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIR 459
++ + +LI YP + + C SL +WSA+ +LL GS D + V++++
Sbjct: 267 IWNLESKLIISEIYPVK-QSKIGVPWCTSL-TWSANGQLLYCGSTDGNIYVYEVK 319
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 210 (79.0 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 57/197 (28%), Positives = 94/197 (47%)
Query: 97 VNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI 156
+ ++ GH++A+ V+ S DG SGS D +VRLWDL+ + GH + V +
Sbjct: 61 IGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSV 120
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
++S D + +VS S+ ++ W+ H WIT + + P A VS
Sbjct: 121 SFSPDNRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAI---IVSC 177
Query: 217 SKDGDARIWDVSLRKCVIC--LSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKL 273
D ++W+ L+ C + L GHT + V DG + +G +D K+W+ +GK
Sbjct: 178 GWDKLVKVWN--LKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKH 235
Query: 274 IRELKGHGHWVNSLALS 290
+ L+ G +NSL S
Sbjct: 236 LYSLET-GSTINSLCFS 251
Score = 202 (76.2 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 76/283 (26%), Positives = 128/283 (45%)
Query: 148 GHKNWVLCIAWSADGK--HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW--EP 203
GH +WV ++ D K +VS S+ +L W+ T SG + KK +TG S
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGE-IGTAKKSLTGHSQAIND 77
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCT 262
V +++ +S S D R+WD+SL + + GHT V V + D I + S+D T
Sbjct: 78 VSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKT 137
Query: 263 IKVWET-TQGKLIRELKGHGHWVNSLALS---TEYALRTGAFDHTGKQYSSPE-EMKKAA 317
IK+W T Q K + H W+ + S + + + +D K ++ ++ K
Sbjct: 138 IKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKN- 196
Query: 318 LERYNKIKGN---APERLV--SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
LE + + +P+ + SG D LW+ K + TG +N + FSP
Sbjct: 197 LEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETG--STINSLCFSPCD 254
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYC 415
W+ +A+ D+ I++WN K + + PV Q + + +C
Sbjct: 255 YWLCAAT-DRFIRIWN-LESKLII---SEIYPVKQSKIGVPWC 292
Score = 189 (71.6 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 61/229 (26%), Positives = 110/229 (48%)
Query: 106 GHTEAVLSVAFSPDGR--QLASGSGDTTVRLWDLNTQ-------TPMFKCTGHKNWVLCI 156
GH++ V SV+ D + + S S D + +W++NT T TGH + +
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
+ S+DG +SGS ++ WD G+ + + GH + +S+ P + R+ VSA
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFI-GHTSDVFSVSFSPDN-----RQIVSA 132
Query: 217 SKDGDARIWDVSLRKCVICLSG--HTLAVTCVKWG---GDGVIYTGSQDCTIKVWETTQG 271
S+D ++W+ +L +C ++ HT +TCV++ +I + D +KVW
Sbjct: 133 SRDKTIKLWN-TLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNC 191
Query: 272 KLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALE 319
L + L+GH +N++ +S + +L +G D K + E +LE
Sbjct: 192 DLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLE 240
Score = 135 (52.6 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 50/181 (27%), Positives = 79/181 (43%)
Query: 99 RCSATIAG--HTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
+C TI HT+ + V FSP Q + S D V++W+L GH +
Sbjct: 146 QCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLN 205
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+ S DG SG K G + WD + GK + +G I + + +PC ++
Sbjct: 206 TVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLETGST--INSLCF------SPCDYWL 257
Query: 215 SASKDGDARIWDVSLRKCVIC----LSGHTLAV---TCVKWGGDG-VIYTGSQDCTIKVW 266
A+ D RIW++ K +I + + V T + W +G ++Y GS D I V+
Sbjct: 258 CAATDRFIRIWNLE-SKLIISEIYPVKQSKIGVPWCTSLTWSANGQLLYCGSTDGNIYVY 316
Query: 267 E 267
E
Sbjct: 317 E 317
Score = 133 (51.9 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
S S+D LSGS D ++++WD+ + + GH +VF+V +SPD ++ S +D+ +
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTI 138
Query: 496 KLW 498
KLW
Sbjct: 139 KLW 141
Score = 128 (50.1 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 427 DMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKV 486
D C+ +S S + +++S D +KVW+++ L ++L GH + V SPDG
Sbjct: 158 DWITCVR-FSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLC 216
Query: 487 ASGGKDRVLKLW 498
ASGGKD V KLW
Sbjct: 217 ASGGKDGVAKLW 228
Score = 68 (29.0 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 405 VYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIR 459
++ + +LI YP + + C SL +WSA+ +LL GS D + V++++
Sbjct: 267 IWNLESKLIISEIYPVK-QSKIGVPWCTSL-TWSANGQLLYCGSTDGNIYVYEVK 319
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 246 (91.7 bits), Expect = 4.5e-18, P = 4.5e-18
Identities = 62/203 (30%), Positives = 100/203 (49%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S+ HT V SV FS DG+ L + S D ++++W + Q ++ H +WV C +S
Sbjct: 95 SSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSP 154
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S+ ++ WD T K N S + + + P N C SA D
Sbjct: 155 DGRLIVSCSEDKTIKIWDT-TSKQCVNNFSDSVGFANFVDFSP---NGTC--IASAGSDH 208
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
RIWD+ + + + H+ V C+ + G + T S D T+K+ + +G+LI L+G
Sbjct: 209 AVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQG 268
Query: 280 HGHWVNSLALSTEYALRT-GAFD 301
H V +++ S + L T G D
Sbjct: 269 HTGPVFTVSFSKDGELFTSGGAD 291
Score = 239 (89.2 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 77/293 (26%), Positives = 133/293 (45%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH A+ S FSP+ +Q+A+ S DT + LW L ++ GHK+ V + +S G L
Sbjct: 16 GHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLL 75
Query: 166 VSGSKAGELQCWD-PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
S S+ ++ W + GK S H + + + +A + V+AS+D ++
Sbjct: 76 ASASRDKTVRLWVLDRKGKSS--EFKAHTAPVRSVDF-----SADGQFLVTASEDKSIKV 128
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
W + ++ + L HT V C K+ DG +I + S+D TIK+W+TT + + +
Sbjct: 129 WSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGF 188
Query: 284 VNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERY-------NKIKGN-APERLVS 334
N + S + + DH + + M + L+ Y N + + + LV+
Sbjct: 189 ANFVDFSPNGTCIASAGSDHAVRIWDI--RMNRL-LQHYQVHSCGVNCLSFHPSGNSLVT 245
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GH V V FS DG+ S D + +W
Sbjct: 246 ASSDGTVKILDLVEGRLIYT-LQGHTGPVFTVSFSKDGELFTSGGADAQVLVW 297
Score = 210 (79.0 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 61/217 (28%), Positives = 101/217 (46%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
++ ++P R + GH + V S+ FSP G LAS S D TVRLW L+ + + H
Sbjct: 44 LWSLKPHARAYRYV-GHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHT 102
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPC 210
V + +SADG+ LV+ S+ ++ W + + L H W+ + P
Sbjct: 103 APVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYS-LYRHTHWVRCAKFSP-----DG 156
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETT 269
R VS S+D +IWD + ++CV S V + +G I + D +++W+
Sbjct: 157 RLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIR 216
Query: 270 QGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGK 305
+L++ + H VN L+ +L T + D T K
Sbjct: 217 MNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVK 253
Score = 196 (74.1 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 60/189 (31%), Positives = 95/189 (50%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKT-RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
+++ + S D + LW ++ + R GH+ +V + FSP G +ASAS DK+++LW
Sbjct: 31 KQIATASWDTFLMLW--SLKPHARAYRYVGHKDVVTSLQFSPQGNLLASASRDKTVRLWV 88
Query: 389 -GTTGKFVAVFRGHVGPVYQIRFE-----LIYCFRYPS-NFYCVVDMSCCMSLYS---W- 437
GK + F+ H PV + F L+ S + + SLY W
Sbjct: 89 LDRKGKS-SEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWV 147
Query: 438 -----SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEV-FA--VDWSPDGEKVASG 489
S D RL++S S+D T+K+WD + KQ + +D V FA VD+SP+G +AS
Sbjct: 148 RCAKFSPDGRLIVSCSEDKTIKIWDTTS---KQCVNNFSDSVGFANFVDFSPNGTCIASA 204
Query: 490 GKDRVLKLW 498
G D +++W
Sbjct: 205 GSDHAVRIW 213
Score = 170 (64.9 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 65/230 (28%), Positives = 100/230 (43%)
Query: 285 NSLA-LSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFL 343
N LA S + +R D GK S E A R + + LV+ S+D ++ +
Sbjct: 73 NLLASASRDKTVRLWVLDRKGK---SSEFKAHTAPVRSVDFSADG-QFLVTASEDKSIKV 128
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W ++ + H V FSPDG+ + S S DK+IK+W+ T+ + V F VG
Sbjct: 129 WS-MYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVG 187
Query: 404 PVYQIRFELI-YCFRYPSNFYCV----VDM----------SCCMSLYSWSADSRLLLSGS 448
+ F C + + V + M SC ++ S+ L++ S
Sbjct: 188 FANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTAS 247
Query: 449 KDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
D T+K+ D+ +L L GH VF V +S DGE SGG D + +W
Sbjct: 248 SDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVW 297
Score = 137 (53.3 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 41/156 (26%), Positives = 71/156 (45%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----L 412
GH+ + FSP+ + +A+AS+D + LW+ + GH V ++F L
Sbjct: 16 GHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLL 75
Query: 413 IYCFRYPSNFYCVVDMSCCMSLYS----------WSADSRLLLSGSKDSTLKVWDIRTQK 462
R + V+D S + +SAD + L++ S+D ++KVW + Q+
Sbjct: 76 ASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQR 135
Query: 463 LKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L H V +SPDG + S +D+ +K+W
Sbjct: 136 FLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 245 (91.3 bits), Expect = 4.8e-18, P = 4.8e-18
Identities = 79/293 (26%), Positives = 132/293 (45%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH A+ S+ SP+G+QLA+ S DT + LW+ ++ GHK+ V + +S G L
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLL 75
Query: 166 VSGSKAGELQCWDP-QTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
S S+ ++ W P + GK S H + + + +A + +AS+D ++
Sbjct: 76 ASASRDRTVRLWIPDKRGKFS--EFKAHTAPVRSVDF-----SADGQFLATASEDKSIKV 128
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
W + ++ + L HT V C K+ DG +I + S+D TIK+W+TT + + +
Sbjct: 129 WSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 284 VNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA------PER--LVS 334
N + + + + D T K + + K L+ Y G P LV+
Sbjct: 189 ANFVDFNPSGTCIASAGSDQTVKVWDV--RVNKL-LQHYQVHSGGVNCISFHPSDNYLVT 245
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GH V V FS G+ AS D + LW
Sbjct: 246 ASSDGTLKILDLLEGRLIYT-LQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 200 (75.5 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 65/203 (32%), Positives = 98/203 (48%)
Query: 315 KAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQW 374
KAA+ + + N + + D F M LW + R GH+ +V V FSP G
Sbjct: 18 KAAITSLD-LSPNGKQLATASWDTFLM-LWNFKPHARAY-RYVGHKDVVTSVQFSPHGNL 74
Query: 375 VASASFDKSIKLW-NGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSN------FYCVVD 427
+ASAS D++++LW GKF + F+ H PV + F F ++ + +
Sbjct: 75 LASASRDRTVRLWIPDKRGKF-SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYR 133
Query: 428 MSCCMSLYS---W------SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEV-FA- 476
SLY W S D RL++S S+D T+K+WD KQ + +D V FA
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN---KQCVNNFSDSVGFAN 190
Query: 477 -VDWSPDGEKVASGGKDRVLKLW 498
VD++P G +AS G D+ +K+W
Sbjct: 191 FVDFNPSGTCIASAGSDQTVKVW 213
Score = 155 (59.6 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 53/182 (29%), Positives = 80/182 (43%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L + S+D ++ +W ++ + H V FSPDG+ + S S DK+IK+W+ T
Sbjct: 117 LATASEDKSIKVWS-MYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN 175
Query: 392 GKFVAVFRGHVGPVYQIRFELI-YCFRYPSNFYCV----VDMSCCMSLY----------S 436
+ V F VG + F C + V V ++ + Y S
Sbjct: 176 KQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCIS 235
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+ L++ S D TLK+ D+ +L L GH VF V +S GE ASGG D +
Sbjct: 236 FHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 295
Query: 497 LW 498
LW
Sbjct: 296 LW 297
Score = 139 (54.0 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 41/156 (26%), Positives = 70/156 (44%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----L 412
GH+ + + SP+G+ +A+AS+D + LWN + GH V ++F L
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLL 75
Query: 413 IYCFRYPSNFYCVVDMSCCMSLYS----------WSADSRLLLSGSKDSTLKVWDIRTQK 462
R + + D S + +SAD + L + S+D ++KVW + Q+
Sbjct: 76 ASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQR 135
Query: 463 LKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L H V +SPDG + S +D+ +K+W
Sbjct: 136 FLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 176 (67.0 bits), Expect = 5.0e-18, Sum P(2) = 5.0e-18
Identities = 44/173 (25%), Positives = 85/173 (49%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
N + HT+AV FS DG+++AS D T++++ T + H++ VLC A
Sbjct: 605 NLSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCA 664
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW--EPVHLNAPCRRFVS 215
+S+D ++ + S +++ WD TGK + H + + + + HL +
Sbjct: 665 FSSDDSYIATCSADKKVKIWDSATGKLV-HTYDEHSEQVNCCHFTNKSNHL-----LLAT 718
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWE 267
S D ++WD++ ++C + GHT +V ++ D + S D T+++W+
Sbjct: 719 GSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWD 771
Score = 174 (66.3 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 75/272 (27%), Positives = 121/272 (44%)
Query: 239 HTLAV--TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE--YA 294
HT AV C G + G+ D T++V++ G+ + ++K H V A S++ Y
Sbjct: 614 HTDAVYHACFSQDGQRIASCGA-DKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYI 672
Query: 295 LRTGA------FDH-TGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPA 347
A +D TGK + +E + + K N L +GS+DF + LW+
Sbjct: 673 ATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHL-LLATGSNDFFLKLWD-L 730
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
K+ + M GH VNH FSPD + +AS S D +++LW+ + A R +
Sbjct: 731 NQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRS----ANERKSINVK-- 784
Query: 408 IRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDL 467
RF + P + +V CC SWSAD ++ +K+ L ++DI T L ++
Sbjct: 785 -RF-FLSSEDPPEDVEVIV--KCC----SWSADGDKIIVAAKNKVL-LFDIHTSGLLAEI 835
Query: 468 -PGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
GH + D+SP ++LW
Sbjct: 836 HTGHHSTIQYCDFSPYDHLAVIALSQYCVELW 867
Score = 164 (62.8 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 58/185 (31%), Positives = 79/185 (42%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL----- 154
C T+ GHT +V FSPD LAS S D T+RLWD+ + K K + L
Sbjct: 735 CRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANER-KSINVKRFFLSSEDP 793
Query: 155 ---------CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV- 204
C +WSADG ++ +K ++ +D T +GH I + P
Sbjct: 794 PEDVEVIVKCCSWSADGDKIIVAAK-NKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYD 852
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTI 263
HL V A +W++ R V GH V V + DG + T S D TI
Sbjct: 853 HLA------VIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTI 906
Query: 264 KVWET 268
+VWET
Sbjct: 907 RVWET 911
Score = 151 (58.2 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 41/130 (31%), Positives = 63/130 (48%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLV 166
H VLS A S D + +S S D T ++W + +P+ + GH V C A+S DG L
Sbjct: 1084 HQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLA 1143
Query: 167 SGSKAGELQCWDPQTGK--PSGNPLS---G---HKKWITGISWEPVHLNAPCRRFVSASK 218
+G GE++ W+ G+ S P+S G H W+T + + P + VSA
Sbjct: 1144 TGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSP-----DSKTLVSAG- 1197
Query: 219 DGDARIWDVS 228
G + W+V+
Sbjct: 1198 -GYLKWWNVA 1206
Score = 148 (57.2 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 65/241 (26%), Positives = 101/241 (41%)
Query: 76 VSVEKVLSIVYQPQAVFRIRPVN-RCSATIAGHT-------EAVLSVA-FSPDGRQLASG 126
+ +++ + +V+Q + N R IAG T EA +S SP +A G
Sbjct: 920 IVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFG 979
Query: 127 SGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSG 186
D +++ +L GHK V I ++ADGK L+S S+ +Q W+ QTG
Sbjct: 980 DEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVF 1039
Query: 187 NPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCV 246
L H++ + + L R +S S DG ++W+V + + H V
Sbjct: 1040 --LQAHQETV-----KDFRLLQDSR-LLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSC 1091
Query: 247 KWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTG 304
D ++ S D T K+W + ELKGH V A S + L TG D G
Sbjct: 1092 AISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATG--DDNG 1149
Query: 305 K 305
+
Sbjct: 1150 E 1150
Score = 133 (51.9 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 75/342 (21%), Positives = 129/342 (37%)
Query: 79 EKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLN 138
+K++ +F I + GH + FSP V LW+++
Sbjct: 811 DKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNID 870
Query: 139 TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG 198
++ + C GH +WV + +S DG ++ S ++ W+ T K N K+ I
Sbjct: 871 SRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWE--TKKVCKNSAIVLKQEIDV 928
Query: 199 ISWE--PVHLNAPCRRFVS--ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVI 254
+ E + L R + A K G + C CLS H + V
Sbjct: 929 VFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCC-CLSPHL----------EYVA 977
Query: 255 YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYS---SP 310
+ G +D IK+ E ++ GH V + + + L + + D + ++
Sbjct: 978 F-GDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGD 1036
Query: 311 EEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSP 370
+A E + RL+S S D T+ +W ++ + + T HQ V S
Sbjct: 1037 YVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWN-VITGRIERDFTCHQGTVLSCAISS 1095
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFEL 412
D +S S DK+ K+W+ + +GH G V F L
Sbjct: 1096 DATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSL 1137
Score = 130 (50.8 bits), Expect = 5.0e-18, Sum P(2) = 5.0e-18
Identities = 42/155 (27%), Positives = 70/155 (45%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----L 412
GH++ V H+ F+ DG+ + S+S D I++WN TG +V + + H V R L
Sbjct: 1001 GHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFL-QAHQETVKDFRLLQDSRLL 1059
Query: 413 IYCFRYPSNFYCVV------DMSCCMSLY---SWSADSRLLLSGSKDSTLKVWDIRTQKL 463
+ F + V+ D +C + S+D+ S S D T K+W
Sbjct: 1060 SWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSP 1119
Query: 464 KQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+L GH V +S DG +A+G + +++W
Sbjct: 1120 LHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIW 1154
Score = 122 (48.0 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 58/258 (22%), Positives = 107/258 (41%)
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKA 316
SQ C +++W + + +GH WV+ + S + + T + D T + + + + K +
Sbjct: 860 SQYC-VELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNS 918
Query: 317 A--LERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQW 374
A L++ + E +V D+ + K + Q V+ SP ++
Sbjct: 919 AIVLKQEIDVVFQENETMVLAVDNIRGL--QLIAGKTGQIDYLPEAQ-VSCCCLSPHLEY 975
Query: 375 VASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF-------------ELIYCFRYPSN 421
VA D +IK+ + + GH V I+F +I + + +
Sbjct: 976 VAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTG 1035
Query: 422 FYCVVDMSC-CMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWS 480
Y + + + DSRLL S S D T+KVW++ T ++++D H V + S
Sbjct: 1036 DYVFLQAHQETVKDFRLLQDSRLL-SWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAIS 1094
Query: 481 PDGEKVASGGKDRVLKLW 498
D K +S D+ K+W
Sbjct: 1095 SDATKFSSTSADKTAKIW 1112
Score = 61 (26.5 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKL---------KQDLPGHADEVFAVDWSP 481
C+ ++S D LL +G + +++W++ +L ++ H V V +SP
Sbjct: 1129 CVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSP 1188
Query: 482 DGEKVASGGKDRVLKLW 498
D + + S G LK W
Sbjct: 1189 DSKTLVSAGG--YLKWW 1203
Score = 41 (19.5 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 23/87 (26%), Positives = 34/87 (39%)
Query: 43 NKLLNNEEKLPYAF---YISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNR 99
N LL + E L YI DH + + S +E+ KV K + YQ A +N+
Sbjct: 7 NCLLQHREALEKDIKTSYIMDHMISNGVLSVIEEEKV---KSQATQYQRAAALIKMILNK 63
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASG 126
+ A+L + L SG
Sbjct: 64 DNCAYISFYNALLHEGYKDLAALLQSG 90
Score = 37 (18.1 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 7/28 (25%), Positives = 13/28 (46%)
Query: 140 QTPMFKCTGHKNWVLCIAWSADGKHLVS 167
Q ++K G WV + GK +++
Sbjct: 137 QQKLWKLNGEPGWVTIYGMAGCGKSVLA 164
>WB|WBGene00006481 [details] [associations]
symbol:plrg-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0018996 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0040011 GO:GO:0000003 HSSP:P16649 EMBL:Z73970
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:Z74030
GeneID:179500 KEGG:cel:CELE_D1054.15 CTD:179500 PIR:T19550
RefSeq:NP_001256259.1 ProteinModelPortal:G5EEL2 SMR:G5EEL2
EnsemblMetazoa:D1054.15a WormBase:D1054.15a NextBio:905670
Uniprot:G5EEL2
Length = 494
Score = 246 (91.7 bits), Expect = 5.0e-18, P = 5.0e-18
Identities = 75/295 (25%), Positives = 129/295 (43%)
Query: 105 AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH 164
+GHT V +V P + ASG D +++WDL + TGH + V + S
Sbjct: 181 SGHTGWVRAVDVEPGNQWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAVKVSPRHPF 240
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
L SG + +++CWD + K + GH + +S P L+ V+ ++D AR+
Sbjct: 241 LFSGGEDKQVKCWDLEYNKVIRH-YHGHLSAVQALSVHP-SLDV----LVTCARDSTARV 294
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
WD+ + V C +GHT V V D + T S D T+++W+ G+ + L H
Sbjct: 295 WDMRTKAQVHCFAGHTNTVADVVCQSVDPQVITASHDATVRLWDLAAGRSMCTLTHHKKS 354
Query: 284 VNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKI----KGNAPERLVSGSDDF 339
V +L + + A KQ+ P+ L +N I N +VSG+D+
Sbjct: 355 VRALTIHPRLNMFASASPDNIKQWKLPKGEFMQNLSGHNAIINTLSSNDDGVVVSGADNG 414
Query: 340 TMFLWE-------PAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
++ W+ + +P+ + + F G + +A DK+IK++
Sbjct: 415 SLCFWDWRSGFCFQKIQTKPQPGSIESEAGIYASCFDKTGLRLITAEADKTIKMY 469
Score = 167 (63.8 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 47/197 (23%), Positives = 92/197 (46%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH +V +V SP L SG D V+ WDL + GH + V ++
Sbjct: 221 SLTGHISSVRAVKVSPRHPFLFSGGEDKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSL 280
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
LV+ ++ + WD +T K + +GH + + + V P + ++AS D
Sbjct: 281 DVLVTCARDSTARVWDMRT-KAQVHCFAGHTNTVADVVCQSVD---P--QVITASHDATV 334
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
R+WD++ + + L+ H +V + ++ + IK W+ +G+ ++ L GH
Sbjct: 335 RLWDLAAGRSMCTLTHHKKSVRALTIHPRLNMFASASPDNIKQWKLPKGEFMQNLSGHNA 394
Query: 283 WVNSLALSTEYALRTGA 299
+N+L+ + + + +GA
Sbjct: 395 IINTLSSNDDGVVVSGA 411
Score = 122 (48.0 bits), Expect = 0.00029, P = 0.00029
Identities = 40/158 (25%), Positives = 67/158 (42%)
Query: 357 TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCF 416
+GH V V P QW AS D+ IK+W+ +G+ GH+ V ++ + F
Sbjct: 181 SGHTGWVRAVDVEPGNQWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAVKVSPRHPF 240
Query: 417 RYPSN----FYC-------VV-----DMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRT 460
+ C V+ +S +L S +L++ ++DST +VWD+RT
Sbjct: 241 LFSGGEDKQVKCWDLEYNKVIRHYHGHLSAVQAL-SVHPSLDVLVTCARDSTARVWDMRT 299
Query: 461 QKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+ GH + V V +V + D ++LW
Sbjct: 300 KAQVHCFAGHTNTVADVVCQSVDPQVITASHDATVRLW 337
Score = 122 (48.0 bits), Expect = 0.00029, P = 0.00029
Identities = 45/181 (24%), Positives = 76/181 (41%)
Query: 334 SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK 393
SG D + +W+ A S Q K +TGH V V SP ++ S DK +K W+ K
Sbjct: 201 SGGADRIIKIWDLA-SGQLKLSLTGHISSVRAVKVSPRHPFLFSGGEDKQVKCWDLEYNK 259
Query: 394 FVAVFRGHVGPVYQIRFE-----LIYC----------FRYPSNFYCVVDMSCCMS-LYSW 437
+ + GH+ V + L+ C R + +C + ++ +
Sbjct: 260 VIRHYHGHLSAVQALSVHPSLDVLVTCARDSTARVWDMRTKAQVHCFAGHTNTVADVVCQ 319
Query: 438 SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKL 497
S D +++ + S D+T+++WD+ + L H V A+ P AS D + K
Sbjct: 320 SVDPQVI-TASHDATVRLWDLAAGRSMCTLTHHKKSVRALTIHPRLNMFASASPDNI-KQ 377
Query: 498 W 498
W
Sbjct: 378 W 378
Score = 54 (24.1 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 16/69 (23%), Positives = 37/69 (53%)
Query: 438 SADSRLLLSGSKDSTLKVWDIRT----QKLK-QDLPGHADE---VFAVDWSPDGEKVASG 489
S D +++SG+ + +L WD R+ QK++ + PG + ++A + G ++ +
Sbjct: 401 SNDDGVVVSGADNGSLCFWDWRSGFCFQKIQTKPQPGSIESEAGIYASCFDKTGLRLITA 460
Query: 490 GKDRVLKLW 498
D+ +K++
Sbjct: 461 EADKTIKMY 469
>FB|FBgn0033454 [details] [associations]
symbol:CG1671 species:7227 "Drosophila melanogaster"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 HSSP:P16649 GO:GO:0032040 KO:K14555
GeneTree:ENSGT00690000102183 OMA:ADSKLIR EMBL:BT004480
RefSeq:NP_610526.1 UniGene:Dm.18811 SMR:Q7JQT9 IntAct:Q7JQT9
STRING:Q7JQT9 EnsemblMetazoa:FBtr0088373 GeneID:36019
KEGG:dme:Dmel_CG1671 UCSC:CG1671-RA FlyBase:FBgn0033454
HOGENOM:HOG000244907 InParanoid:Q7JQT9 OrthoDB:EOG4KPRRV
GenomeRNAi:36019 NextBio:796373 Uniprot:Q7JQT9
Length = 787
Score = 170 (64.9 bits), Expect = 5.4e-18, Sum P(2) = 5.4e-18
Identities = 53/192 (27%), Positives = 88/192 (45%)
Query: 327 NAPERLVSGSDDFTMFLWEPAVSKQPKTRMT--------GHQQLVNHVYFSPDGQWVASA 378
N S S D +M +W+ SK+ + + H + VN V ++P+ + +A+A
Sbjct: 437 NGATGFASVSQDGSMKVWQLVRSKEDRNSYSFNLRYAALSHDKEVNCVAYAPNNKLIATA 496
Query: 379 SFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF----ELIY-----C-FRY--PSNFYCV- 425
S DK+ K+W + V RGH V+ +RF +++ C R SNF C+
Sbjct: 497 SQDKTAKVWLAESNTLQGVLRGHTRGVWSVRFSPVDQIVLTSSSDCTLRIWSISNFSCIK 556
Query: 426 -VDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGE 484
D C + + + ++S + D LK+W+I+T Q L H D V+A+ S
Sbjct: 557 RFDQECTILRAEFLDHGKFIISAASDGLLKLWNIKTNTCLQSLDEHNDRVWALAVSARSN 616
Query: 485 KVA-SGGKDRVL 495
+ +GG D L
Sbjct: 617 RFFYTGGADSKL 628
Score = 153 (58.9 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 50/185 (27%), Positives = 84/185 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLW--------DLNTQTPMFKCTGHKNWVLC 155
I GH++ V+S+A S + L S D +VRLW L T C H + + C
Sbjct: 376 IVGHSDTVMSLAASQN--LLISVGKDCSVRLWRLQHDKDCSLEALTQQANC--HTSTIGC 431
Query: 156 IAWSADGKH-LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHL--NAPCRR 212
+A + +G S S+ G ++ W K N S + ++ + V+ AP +
Sbjct: 432 VAMTHNGATGFASVSQDGSMKVWQLVRSKEDRNSYSFNLRYAALSHDKEVNCVAYAPNNK 491
Query: 213 FVS-ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETTQ 270
++ AS+D A++W L GHT V V++ D ++ T S DCT+++W +
Sbjct: 492 LIATASQDKTAKVWLAESNTLQGVLRGHTRGVWSVRFSPVDQIVLTSSSDCTLRIWSISN 551
Query: 271 GKLIR 275
I+
Sbjct: 552 FSCIK 556
Score = 151 (58.2 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 87/421 (20%), Positives = 171/421 (40%)
Query: 106 GHTEAVLSVAF---SPDGRQLASGSGDTTVRLWDLNTQ--TPMFKCTGHKNWVLCIAWSA 160
GH V ++F + D ++ + S D + +W L Q + K + + + ++
Sbjct: 204 GHLSQVTGLSFKSNASDCNEIVTVSRDKVMIVWQLQEQLESKQLKVLPLYDELEGVVYAD 263
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+G+ ++ S +G+LQ DP++ K + LS I+ + +H + ++ + +
Sbjct: 264 EGQLIIVASGSGKLQQVDPKSWKIR-DILSQSDFQISRL----LHCSE-LKQLALVTTEQ 317
Query: 221 DARIWDVSLRKCVICLSGHTLAVT--CVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELK 278
+ ++DV + + L G+ + C D + + K+++T + +
Sbjct: 318 NILVYDVETLEPIKHLVGYNDEILDMCFMGEHDRYLAVATNSKHFKLYDTEHDMNCKLIV 377
Query: 279 GHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNK-------------IK 325
GH V SLA S + G D + + + + K +LE + +
Sbjct: 378 GHSDTVMSLAASQNLLISVGK-DCSVRLWRLQHD-KDCSLEALTQQANCHTSTIGCVAMT 435
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMT--------GHQQLVNHVYFSPDGQWVAS 377
N S S D +M +W+ SK+ + + H + VN V ++P+ + +A+
Sbjct: 436 HNGATGFASVSQDGSMKVWQLVRSKEDRNSYSFNLRYAALSHDKEVNCVAYAPNNKLIAT 495
Query: 378 ASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSW 437
AS DK+ K+W + V RGH V+ +RF P VD
Sbjct: 496 ASQDKTAKVWLAESNTLQGVLRGHTRGVWSVRFS-------P------VD---------- 532
Query: 438 SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKL 497
+++L+ S D TL++W I + + ++ G+ + S D +LKL
Sbjct: 533 ----QIVLTSSSDCTLRIWSISNFSCIKRFDQECT-ILRAEFLDHGKFIISAASDGLLKL 587
Query: 498 W 498
W
Sbjct: 588 W 588
Score = 131 (51.2 bits), Expect = 5.4e-18, Sum P(2) = 5.4e-18
Identities = 37/127 (29%), Positives = 60/127 (47%)
Query: 105 AGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLNTQTPM--FKCTGHKNWVLCIAWSAD 161
A H V+ V FSP GR + SG D T+RLWD + + + K W+L +
Sbjct: 116 AQHKGPVIRVEFSPCGRLICTSGGADATLRLWDYSNNSCLGALKDFPGPAWLLVFHPNVL 175
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAP-CRRFVSASKDG 220
K + +G + W+ +T K + + GH +TG+S++ NA C V+ S+D
Sbjct: 176 RKEIYAGGSDNTVYAWNYET-KTLVHKMRGHLSQVTGLSFKS---NASDCNEIVTVSRDK 231
Query: 221 DARIWDV 227
+W +
Sbjct: 232 VMIVWQL 238
Score = 120 (47.3 bits), Expect = 0.00089, P = 0.00089
Identities = 46/208 (22%), Positives = 87/208 (41%)
Query: 107 HTEAVLSVAFSPDGRQ-LASGSGDTTVRLWDL-------NTQT--PMFKCTGHKNWVLCI 156
HT + VA + +G AS S D ++++W L N+ + + H V C+
Sbjct: 425 HTSTIGCVAMTHNGATGFASVSQDGSMKVWQLVRSKEDRNSYSFNLRYAALSHDKEVNCV 484
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
A++ + K + + S+ + W ++ G L GH + + + + PV + +++
Sbjct: 485 AYAPNNKLIATASQDKTAKVWLAESNTLQG-VLRGHTRGVWSVRFSPVD-----QIVLTS 538
Query: 217 SKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRE 276
S D RIW +S C+ + I + + D +K+W ++
Sbjct: 539 SSDCTLRIWSISNFSCIKRFDQECTILRAEFLDHGKFIISAASDGLLKLWNIKTNTCLQS 598
Query: 277 LKGHGHWVNSLALSTEYALRTGAFDHTG 304
L H V +LA+S R+ F +TG
Sbjct: 599 LDEHNDRVWALAVSA----RSNRFFYTG 622
Score = 114 (45.2 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 36/144 (25%), Positives = 61/144 (42%)
Query: 153 VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRR 212
+ C S + HLV+ ++G L+ W TGK + HK + + + +PC R
Sbjct: 81 ITCFGLSQE--HLVTAHRSGLLRLWQLDTGKLVKLWKAQHKGPVIRVEF------SPCGR 132
Query: 213 FVSASKDGDA--RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV---IYTGSQDCTIKVWE 267
+ S DA R+WD S C+ L + + + + IY G D T+ W
Sbjct: 133 LICTSGGADATLRLWDYSNNSCLGALKDFPGPAWLLVFHPNVLRKEIYAGGSDNTVYAWN 192
Query: 268 TTQGKLIRELKGHGHWVNSLALST 291
L+ +++GH V L+ +
Sbjct: 193 YETKTLVHKMRGHLSQVTGLSFKS 216
Score = 78 (32.5 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 34/135 (25%), Positives = 60/135 (44%)
Query: 156 IAWSADGKHL--VSGSKAGELQCWDPQTGKPSG--NPLSGHKK--WITGISWEPVHLNA- 208
IAWS +G HL ++GS ++ Q G +P + +K+ + I E +
Sbjct: 25 IAWSPNGHHLYCLNGSAVNQVDVQTSQILNSYGLSSPSADNKRPAELDNIDVEEDTITCF 84
Query: 209 --PCRRFVSASKDGDARIWDVSLRKCV-ICLSGHTLAVTCVKWGGDG-VIYT-GSQDCTI 263
V+A + G R+W + K V + + H V V++ G +I T G D T+
Sbjct: 85 GLSQEHLVTAHRSGLLRLWQLDTGKLVKLWKAQHKGPVIRVEFSPCGRLICTSGGADATL 144
Query: 264 KVWETTQGKLIRELK 278
++W+ + + LK
Sbjct: 145 RLWDYSNNSCLGALK 159
Score = 71 (30.1 bits), Expect = 9.2e-12, Sum P(2) = 9.2e-12
Identities = 20/88 (22%), Positives = 40/88 (45%)
Query: 98 NRCSATIAGHTEAVLSVAFSPD--GRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
N C + + F P+ +++ +G D TV W+ T+T + K GH + V
Sbjct: 152 NSCLGALKDFPGPAWLLVFHPNVLRKEIYAGGSDNTVYAWNYETKTLVHKMRGHLSQVTG 211
Query: 156 IAW---SADGKHLVSGSKAGELQCWDPQ 180
+++ ++D +V+ S+ + W Q
Sbjct: 212 LSFKSNASDCNEIVTVSRDKVMIVWQLQ 239
Score = 71 (30.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 17/63 (26%), Positives = 35/63 (55%)
Query: 446 SGSKDSTLKVWD-IRTQK--------LKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
S S+D ++KVW +R+++ L+ H EV V ++P+ + +A+ +D+ K
Sbjct: 444 SVSQDGSMKVWQLVRSKEDRNSYSFNLRYAALSHDKEVNCVAYAPNNKLIATASQDKTAK 503
Query: 497 LWM 499
+W+
Sbjct: 504 VWL 506
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 211 (79.3 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 73/270 (27%), Positives = 124/270 (45%)
Query: 97 VNRCSATIAGHTEAVLSVAFSP---DGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKN 151
V +C GHT +V +VA P +G LAS S D T++ ++L +Q +
Sbjct: 399 VYKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAV 458
Query: 152 WVL--------CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
W + I S DG+ + S S+ ++ WD TG+ G L GH++ + S+ P
Sbjct: 459 WTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVG-VLRGHRRGVWACSFNP 517
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCT 262
R+ S S D RIW+V ++CV L GHT A+ + + G + + + D
Sbjct: 518 FS-----RQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGL 572
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYS--SPEEMKKAALE 319
+KVW + G+ + L H V +LA + +L +G D + + E + K A E
Sbjct: 573 VKVWSLSSGECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVWKDVTEEYIAKQAEE 632
Query: 320 RYNKIKGNAPERLVSGSDDFTMFLWEPAVS 349
+++ E+L+S + W+ A++
Sbjct: 633 LERRVEA---EQLLSNFEQTED--WQQAIA 657
Score = 179 (68.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 62/219 (28%), Positives = 104/219 (47%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC----TGHKNWVLCIAWS 159
+ GHT+ VL++ S DG LA+G+ D TVRLW+LN + ++KC TGH V +A
Sbjct: 360 LEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALG 419
Query: 160 ---ADG--KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH---LNAPCR 211
+G L S S+ L+ ++ + + + + S W V+ ++ R
Sbjct: 420 PLDVNGYPTFLASSSQDRTLKRFNLGS-QLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGR 478
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETTQ 270
SAS+D ++WD S + V L GH V + + +GS D TI++W
Sbjct: 479 IIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDT 538
Query: 271 GKLIRELKGH-GHWVNSLALSTEYALRTGAFDHTGKQYS 308
+ ++ L+GH G + + +S + + A D K +S
Sbjct: 539 QQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWS 577
Score = 165 (63.1 bits), Expect = 7.1e-18, Sum P(2) = 7.1e-18
Identities = 49/156 (31%), Positives = 76/156 (48%)
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRY 418
H + VN + S DG+ +ASAS DK+IKLW+ +TG+ V V RGH V+ F + +
Sbjct: 464 HDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNP-FSRQL 522
Query: 419 PSN-------FYCVVDMSCCMSLYSWS-ADSRLL--------LSGSKDSTLKVWDIRTQK 462
S + V C +L + A +L+ +S + D +KVW + + +
Sbjct: 523 ASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGE 582
Query: 463 LKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L H D V+A+ DG + SGG D V+ +W
Sbjct: 583 CVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVW 618
Score = 135 (52.6 bits), Expect = 7.1e-18, Sum P(2) = 7.1e-18
Identities = 43/190 (22%), Positives = 80/190 (42%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
++ I P R ++ H V+++ P LA+G + V++WD+ GH
Sbjct: 87 IYEI-PSGRRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHG 145
Query: 151 NWVLCIAWSADGKH-----LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
+ + + GKH L SG+ ++ WD + + S GH I G+++EP
Sbjct: 146 GVISALCF---GKHQNTWVLASGADDSRVRLWDLNSSR-SMAVFEGHSSVIRGLTFEPTG 201
Query: 206 LNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW-GG---DGVIYTGSQDC 261
+S S+D ++W++ R V + +V + W G + ++YT +
Sbjct: 202 -----SFLLSGSRDKTVQVWNIKKRSAVRTIPVFH-SVEAIGWVNGQPEEKILYTAGEGN 255
Query: 262 TIKVWETTQG 271
I W+ G
Sbjct: 256 LILAWDWKSG 265
Score = 133 (51.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 51/223 (22%), Positives = 101/223 (45%)
Query: 190 SGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVS--LRK------CVICLSGHTL 241
+GH +T ++ P+ +N S+S+D + +++ L K V + H
Sbjct: 407 TGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDR 466
Query: 242 AVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGH--GHWVNSLALSTEYALRTG 298
V ++ DG +I + SQD TIK+W+++ G+++ L+GH G W S + L +G
Sbjct: 467 DVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQ-LASG 525
Query: 299 AFDHTGKQYSSPEEMKKAALERYNK-----IKGNAPERLVSGSDDFTMFLWEPAVSKQPK 353
+ D T + ++ + LE + I + ++VS + D + +W + +
Sbjct: 526 SGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVA 585
Query: 354 TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVA 396
T + H+ V + DG + S D + +W T +++A
Sbjct: 586 T-LDNHEDRVWALASRFDGSLLVSGGADAVVSVWKDVTEEYIA 627
Score = 128 (50.1 bits), Expect = 7.6e-14, Sum P(2) = 7.6e-14
Identities = 42/147 (28%), Positives = 68/147 (46%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN----GTTGKFVAVFRGHVGPVYQIRFE 411
+ GH +V + S DG W+A+ + D +++LWN K + VF GH V +
Sbjct: 360 LEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALG 419
Query: 412 LIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHA 471
+ YP+ F + S +L ++ S+L + S S VW I+ H
Sbjct: 420 PLDVNGYPT-F--LASSSQDRTLKRFNLGSQL--NKSDFSNRAVWTIKA---------HD 465
Query: 472 DEVFAVDWSPDGEKVASGGKDRVLKLW 498
+V A+ S DG +AS +D+ +KLW
Sbjct: 466 RDVNAIQVSKDGRIIASASQDKTIKLW 492
Score = 112 (44.5 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 44/161 (27%), Positives = 75/161 (46%)
Query: 322 NKIKGNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF 380
N I+ + R++ S S D T+ LW+ + + + GH++ V F+P + +AS S
Sbjct: 469 NAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGV-LRGHRRGVWACSFNPFSRQLASGSG 527
Query: 381 DKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVD-------MS---C 430
D++I++WN T + V GH G + +LIY + D +S C
Sbjct: 528 DRTIRIWNVDTQQCVQTLEGHTGAI----LKLIYISQGTQVVSAAADGLVKVWSLSSGEC 583
Query: 431 CMSLYS-----WSADSR----LLLSGSKDSTLKVWDIRTQK 462
+L + W+ SR LL+SG D+ + VW T++
Sbjct: 584 VATLDNHEDRVWALASRFDGSLLVSGGADAVVSVWKDVTEE 624
Score = 109 (43.4 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 32/168 (19%), Positives = 73/168 (43%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
V ++A + D ++L + + ++++ + + H+ V+ + L +G
Sbjct: 64 VTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGA 123
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR 230
G ++ WD G + GH I+ + + H N S + D R+WD++
Sbjct: 124 EGLVKVWDI-AGAYVTHSFRGHGGVISALCFGK-HQNTWV--LASGADDSRVRLWDLNSS 179
Query: 231 KCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIREL 277
+ + GH+ + + + G + +GS+D T++VW + +R +
Sbjct: 180 RSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTI 227
Score = 93 (37.8 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 28/157 (17%), Positives = 70/157 (44%)
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPC 210
++V +A ++D K L++ ++ L ++ +G+ + + H+ + ++ +P +
Sbjct: 62 DYVTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKS-MKAHETPVITMTIDPTNT---- 116
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGH--TLAVTCV-KWGGDGVIYTGSQDCTIKVWE 267
+ +G ++WD++ GH ++ C K V+ +G+ D +++W+
Sbjct: 117 -LLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWD 175
Query: 268 TTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHT 303
+ + +GH + L T L +G+ D T
Sbjct: 176 LNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKT 212
Score = 39 (18.8 bits), Expect = 5.3e-13, Sum P(2) = 5.3e-13
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 434 LYSWSADSRLLLSGSKD 450
L+S+S + L LSG KD
Sbjct: 731 LHSYSPEHLLKLSGIKD 747
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 244 (91.0 bits), Expect = 7.6e-18, P = 7.6e-18
Identities = 79/293 (26%), Positives = 133/293 (45%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH A+ S FSP+ +Q+A+ S DT + LW L ++ GHK+ V + +S G L
Sbjct: 16 GHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLL 75
Query: 166 VSGSKAGELQCWD-PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
S S+ ++ W + GK S H + + + +A + V+AS+D ++
Sbjct: 76 ASASRDRTVRLWVLDRKGKSS--EFKAHTAPVRSVDF-----SADGQLLVTASEDKSIKV 128
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
W + ++ + L HT V C K+ DG +I + S+D TIK+W+TT + + +
Sbjct: 129 WSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 284 VNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERY--NKIKGNA----P--ERLVS 334
N + + + + DH K + M K L+ Y + N P LV+
Sbjct: 189 ANFVDFNPNGTCIASAGSDHAVKIWDI--RMNKL-LQHYQVHSCGVNCLSFHPLGNSLVT 245
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GH V V FS DG+ + S D + +W
Sbjct: 246 ASSDGTVKMLDLIEGRLIYT-LQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 241 (89.9 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 62/204 (30%), Positives = 102/204 (50%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S+ HT V SV FS DG+ L + S D ++++W + Q ++ H +WV C +S
Sbjct: 95 SSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSP 154
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S+ ++ WD T K N S + + + P N C SA D
Sbjct: 155 DGRLIVSCSEDKTIKIWDT-TNKQCVNNFSDSVGFANFVDFNP---NGTC--IASAGSDH 208
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWG--GDGVIYTGSQDCTIKVWETTQGKLIRELK 278
+IWD+ + K + H+ V C+ + G+ ++ T S D T+K+ + +G+LI L+
Sbjct: 209 AVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLV-TASSDGTVKMLDLIEGRLIYTLQ 267
Query: 279 GHGHWVNSLALSTEYALRT-GAFD 301
GH V +++ S + L T G D
Sbjct: 268 GHTGPVFTVSFSKDGELLTSGGAD 291
Score = 192 (72.6 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 59/189 (31%), Positives = 94/189 (49%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKT-RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
+++ + S D + LW ++ + R GH+ +V + FSP G +ASAS D++++LW
Sbjct: 31 KQIATASWDTFLMLW--SLKPHARAYRYVGHKDVVTSLQFSPQGNLLASASRDRTVRLWV 88
Query: 389 -GTTGKFVAVFRGHVGPVYQIRFE-----LIYCFRYPS-NFYCVVDMSCCMSLYS---W- 437
GK + F+ H PV + F L+ S + + SLY W
Sbjct: 89 LDRKGKS-SEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWV 147
Query: 438 -----SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEV-FA--VDWSPDGEKVASG 489
S D RL++S S+D T+K+WD KQ + +D V FA VD++P+G +AS
Sbjct: 148 RCAKFSPDGRLIVSCSEDKTIKIWDTTN---KQCVNNFSDSVGFANFVDFNPNGTCIASA 204
Query: 490 GKDRVLKLW 498
G D +K+W
Sbjct: 205 GSDHAVKIW 213
Score = 167 (63.8 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 65/230 (28%), Positives = 100/230 (43%)
Query: 285 NSLA-LSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFL 343
N LA S + +R D GK S E A R + + LV+ S+D ++ +
Sbjct: 73 NLLASASRDRTVRLWVLDRKGK---SSEFKAHTAPVRSVDFSADG-QLLVTASEDKSIKV 128
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W ++ + H V FSPDG+ + S S DK+IK+W+ T + V F VG
Sbjct: 129 WS-MFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVG 187
Query: 404 PVYQIRFELI-YCFRYPSNFYCV----VDM----------SCCMSLYSWSADSRLLLSGS 448
+ F C + + V + M SC ++ S+ L++ S
Sbjct: 188 FANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTAS 247
Query: 449 KDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
D T+K+ D+ +L L GH VF V +S DGE + SGG D + +W
Sbjct: 248 SDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 139 (54.0 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 42/156 (26%), Positives = 72/156 (46%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----L 412
GH+ + FSP+ + +A+AS+D + LW+ + GH V ++F L
Sbjct: 16 GHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLL 75
Query: 413 IYCFRYPSNFYCVVDMSCCMSLYS----------WSADSRLLLSGSKDSTLKVWDIRTQK 462
R + V+D S + +SAD +LL++ S+D ++KVW + Q+
Sbjct: 76 ASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQR 135
Query: 463 LKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L H V +SPDG + S +D+ +K+W
Sbjct: 136 FLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 244 (91.0 bits), Expect = 7.7e-18, P = 7.7e-18
Identities = 78/293 (26%), Positives = 132/293 (45%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH A+ S+ SP+G+QLA+ S DT + LW+ ++ GHK+ V + +S G L
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLL 75
Query: 166 VSGSKAGELQCWDP-QTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
S S+ ++ W P + GK S H + + + +A + +AS+D ++
Sbjct: 76 ASASRDRTVRLWIPDKRGKFS--EFKAHTAPVRSVDF-----SADGQFLATASEDKSIKV 128
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
W + ++ + L HT V C K+ DG +I + S+D TIK+W+TT + + +
Sbjct: 129 WSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGF 188
Query: 284 VNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA------PER--LVS 334
N + + + + D T K + + K L+ Y G P L++
Sbjct: 189 ANFVDFNPSGTCIASAGSDQTVKVWDV--RVNKL-LQHYQVHSGGVNCISFHPSGNYLIT 245
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
S D T+ + + + T + GH V V FS G+ AS D + LW
Sbjct: 246 ASSDGTLKILDLLEGRLIYT-LQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 200 (75.5 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 65/203 (32%), Positives = 98/203 (48%)
Query: 315 KAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQW 374
KAA+ + + N + + D F M LW + R GH+ +V V FSP G
Sbjct: 18 KAAITSLD-LSPNGKQLATASWDTFLM-LWNFKPHARAY-RYVGHKDVVTSVQFSPHGNL 74
Query: 375 VASASFDKSIKLW-NGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSN------FYCVVD 427
+ASAS D++++LW GKF + F+ H PV + F F ++ + +
Sbjct: 75 LASASRDRTVRLWIPDKRGKF-SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYR 133
Query: 428 MSCCMSLYS---W------SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEV-FA- 476
SLY W S D RL++S S+D T+K+WD KQ + +D V FA
Sbjct: 134 QRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN---KQCVNNFSDSVGFAN 190
Query: 477 -VDWSPDGEKVASGGKDRVLKLW 498
VD++P G +AS G D+ +K+W
Sbjct: 191 FVDFNPSGTCIASAGSDQTVKVW 213
Score = 156 (60.0 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 53/182 (29%), Positives = 80/182 (43%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L + S+D ++ +W ++ + H V FSPDG+ + S S DK+IK+W+ T
Sbjct: 117 LATASEDKSIKVWS-MYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN 175
Query: 392 GKFVAVFRGHVGPVYQIRFELI-YCFRYPSNFYCV----VDMSCCMSLY----------S 436
+ V F VG + F C + V V ++ + Y S
Sbjct: 176 KQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCIS 235
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+ L++ S D TLK+ D+ +L L GH VF V +S GE ASGG D +
Sbjct: 236 FHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 295
Query: 497 LW 498
LW
Sbjct: 296 LW 297
Score = 139 (54.0 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 41/156 (26%), Positives = 70/156 (44%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----L 412
GH+ + + SP+G+ +A+AS+D + LWN + GH V ++F L
Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLL 75
Query: 413 IYCFRYPSNFYCVVDMSCCMSLYS----------WSADSRLLLSGSKDSTLKVWDIRTQK 462
R + + D S + +SAD + L + S+D ++KVW + Q+
Sbjct: 76 ASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQR 135
Query: 463 LKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L H V +SPDG + S +D+ +K+W
Sbjct: 136 FLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 249 (92.7 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 71/276 (25%), Positives = 129/276 (46%)
Query: 121 RQLASGSGDTTVRLWDLN-TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDP 179
R L +G D V LW + T +PM C GH + V +A++++ +++G+ +G ++ WD
Sbjct: 29 RLLLTGGDDYKVNLWSIGKTTSPMSLC-GHTSPVDSVAFNSEEVLVLAGASSGVIKLWDL 87
Query: 180 QTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGH 239
+ K +GH+ + + + P S S D + R+WD + C+ GH
Sbjct: 88 EESKMV-RAFTGHRSNCSAVEFHPFG-----EFLASGSSDTNLRVWDTRKKGCIQTYKGH 141
Query: 240 TLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALST-EYALRT 297
T ++ +++ DG + +G D +KVW+ T GKL+ E K H + SL E+ L T
Sbjct: 142 TRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLAT 201
Query: 298 GAFDHTGKQYSSPE-EMKKAALERYNKIKGNA--PE--RLVSGSDD-FTMFLWEPAVSKQ 351
G+ D T K + E+ ++ A P+ L G DD ++ WEP + +
Sbjct: 202 GSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDDGLKVYSWEPVICRD 261
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
G L + + +G+++ + + S+ +W
Sbjct: 262 GVDM--GWSTLGD--FCINEGKFIGCSYYRNSVGIW 293
Score = 177 (67.4 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 53/180 (29%), Positives = 86/180 (47%)
Query: 239 HTLAVTCVKWGG--DGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL- 295
H+ V C+ G ++ TG D + +W + L GH V+S+A ++E L
Sbjct: 14 HSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLV 73
Query: 296 RTGAFDHTGKQYSSPE-EMKKAAL-ERYN--KIKGNA-PERLVSGSDDFTMFLWEPAVSK 350
GA K + E +M +A R N ++ + E L SGS D + +W+
Sbjct: 74 LAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKG 133
Query: 351 QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+T GH + ++ + FSPDG+WV S D +K+W+ T GK + F+ H GP+ + F
Sbjct: 134 CIQT-YKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDF 192
Score = 174 (66.3 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 53/207 (25%), Positives = 91/207 (43%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GHT V SVAF+ + + +G+ ++LWDL + TGH++ + + G
Sbjct: 53 SLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFG 112
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ L SGS L+ WD + K GH + I+ I + P R VS D
Sbjct: 113 EFLASGSSDTNLRVWDTRK-KGCIQTYKGHTRGISTIEFSP-----DGRWVVSGGLDNVV 166
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETTQGKLIRELKGHG 281
++WD++ K + H + + + + ++ TGS D T+K W+ +LI +
Sbjct: 167 KVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEA 226
Query: 282 HWVNSLALSTEYALRTGAFDHTGKQYS 308
V ++A + D K YS
Sbjct: 227 TGVRAIAFHPDGQTLFCGLDDGLKVYS 253
Score = 164 (62.8 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 50/183 (27%), Positives = 81/183 (44%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L++G DD+ + LW + P + + GH V+ V F+ + V + + IKLW+
Sbjct: 31 LLTGGDDYKVNLWSIGKTTSPMS-LCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEE 89
Query: 392 GKFVAVFRGHVGPVYQIRF----ELIYCFRYPSNFYCVVDM--SCCMSLYS--------- 436
K V F GH + F E + +N V D C+ Y
Sbjct: 90 SKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLR-VWDTRKKGCIQTYKGHTRGISTI 148
Query: 437 -WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
+S D R ++SG D+ +KVWD+ KL + H + ++D+ P +A+G DR +
Sbjct: 149 EFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTV 208
Query: 496 KLW 498
K W
Sbjct: 209 KFW 211
Score = 156 (60.0 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 50/194 (25%), Positives = 81/194 (41%)
Query: 79 EKVLSIVYQPQAVFRIRPVNRCSATIA--GHTEAVLSVAFSPDGRQLASGSGDTTVRLWD 136
E+VL + V ++ + A GH +V F P G LASGS DT +R+WD
Sbjct: 69 EEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWD 128
Query: 137 LNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWI 196
+ + GH + I +S DG+ +VSG ++ WD GK + H+ I
Sbjct: 129 TRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLL-HEFKCHEGPI 187
Query: 197 TGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIY 255
+ + P+ + S D + WD+ + + V + + DG ++
Sbjct: 188 RSLDFHPLEF-----LLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLF 242
Query: 256 TGSQDCTIKV--WE 267
G D +KV WE
Sbjct: 243 CGLDD-GLKVYSWE 255
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 52/188 (27%), Positives = 87/188 (46%)
Query: 327 NAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
N+ E LV +G+ + LW+ SK + TGH+ + V F P G+++AS S D +++
Sbjct: 67 NSEEVLVLAGASSGVIKLWDLEESKMVRA-FTGHRSNCSAVEFHPFGEFLASGSSDTNLR 125
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVV---DMSCCMSLYSW----- 437
+W+ + ++GH + I F + VV D++ L+ +
Sbjct: 126 VWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEG 185
Query: 438 ---SADSR----LLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 490
S D LL +GS D T+K WD+ T +L A V A+ + PDG+ + G
Sbjct: 186 PIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGL 245
Query: 491 KDRVLKLW 498
D LK++
Sbjct: 246 DDG-LKVY 252
>UNIPROTKB|B3KVK2 [details] [associations]
symbol:GNB1 "cDNA FLJ16663 fis, clone THYMU2005759, highly
similar to Guanine nucleotide-binding proteinG(I)/G(S)/G(T) subunit
beta 1" species:9606 "Homo sapiens" [GO:0001917 "photoreceptor
inner segment" evidence=IEA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IEA] [GO:0007200 "phospholipase C-activating
G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010659 "cardiac muscle cell apoptotic process" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0042622 "photoreceptor
outer segment membrane" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 GO:GO:0001750
EMBL:AL109917 EMBL:AL031282 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 UniGene:Hs.430425 HGNC:HGNC:4396 ChiTaRS:GNB1
EMBL:AK122949 IPI:IPI00642117 ProteinModelPortal:B3KVK2 SMR:B3KVK2
STRING:B3KVK2 PRIDE:B3KVK2 Ensembl:ENST00000455156
OrthoDB:EOG4GHZR3 ArrayExpress:B3KVK2 Bgee:B3KVK2 Uniprot:B3KVK2
Length = 240
Score = 201 (75.8 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 62/209 (29%), Positives = 100/209 (47%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT--QTPMFKCTGHKNWVLCI 156
R S +AGHT LS D Q+ + SGDTT LWD+ T QT F TGH V+ +
Sbjct: 34 RVSRELAGHT-GYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTF--TGHTGDVMSL 90
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
+ + D + VSG+ + WD + G +GH+ I I + P + NA F +
Sbjct: 91 SLAPDTRLFVSGACDASAKLWDVREGM-CRQTFTGHESDINAICFFP-NGNA----FATG 144
Query: 217 SKDGDARIWDVSLRKCVICLSGHTL--AVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKL 273
S D R++D+ + ++ S + +T V + G ++ G D VW+ +
Sbjct: 145 SDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADR 204
Query: 274 IRELKGHGHWVNSLALSTE-YALRTGAFD 301
L GH + V+ L ++ + A+ TG++D
Sbjct: 205 AGVLAGHDNRVSCLGVTDDGMAVATGSWD 233
Score = 169 (64.5 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 45/167 (26%), Positives = 77/167 (46%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
+ T GHT V+S++ +PD R SG+ D + +LWD+ TGH++ + I +
Sbjct: 77 TTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFP 136
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+G +GS + +D + + H I GI+ V + R ++ D
Sbjct: 137 NGNAFATGSDDATCRLFDLRADQELMT--YSHDNIICGIT--SVSFSKSGRLLLAGYDDF 192
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVW 266
+ +WD L+GH V+C+ DG+ + TGS D +K+W
Sbjct: 193 NCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 239
Score = 161 (61.7 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 45/186 (24%), Positives = 84/186 (45%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQ 270
+ V++S D +WD+ + +GHT V + D ++ +G+ D + K+W+ +
Sbjct: 56 QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE 115
Query: 271 GKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG--- 326
G + GH +N++ A TG+ D T + + + + N I G
Sbjct: 116 GMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITS 175
Query: 327 ----NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
+ L++G DDF +W+ A+ + GH V+ + + DG VA+ S+D
Sbjct: 176 VSFSKSGRLLLAGYDDFNCNVWD-ALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDS 234
Query: 383 SIKLWN 388
+K+WN
Sbjct: 235 FLKIWN 240
Score = 150 (57.9 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 45/178 (25%), Positives = 84/178 (47%)
Query: 112 LSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT----GHKNWVLCIAWSADGKHLVS 167
++ A++P G +A G D +++L T+ + + GH ++ C + D +V+
Sbjct: 1 MTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF-LDDNQIVT 59
Query: 168 GSKAGELQC--WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
S G+ C WD +TG+ + +GH + +S P R FVS + D A++W
Sbjct: 60 SS--GDTTCALWDIETGQQT-TTFTGHTGDVMSLSLAP-----DTRLFVSGACDASAKLW 111
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGH 282
DV C +GH + + + +G + TGS D T ++++ + +EL + H
Sbjct: 112 DVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDL---RADQELMTYSH 166
Score = 128 (50.1 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 48/178 (26%), Positives = 77/178 (43%)
Query: 236 LSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL 295
L+GHT ++C ++ D I T S D T +W+ G+ GH V SL+L+ + L
Sbjct: 39 LAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRL 98
Query: 296 R-TGAFDHTGKQYSSPEEMKKAALERY----NKI----KGNAPERLVSGSDDFTMFLWEP 346
+GA D + K + E M + + N I GNA +GSDD T L++
Sbjct: 99 FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA---FATGSDDATCRLFDL 155
Query: 347 AVSKQPKTRMTGHQQLV---NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
++ T H ++ V FS G+ + + D + +W+ V GH
Sbjct: 156 RADQELMTY--SHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGH 211
Score = 120 (47.3 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 432 MSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGK 491
MSL S + D+RL +SG+ D++ K+WD+R +Q GH ++ A+ + P+G A+G
Sbjct: 88 MSL-SLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSD 146
Query: 492 DRVLKLW 498
D +L+
Sbjct: 147 DATCRLF 153
Score = 106 (42.4 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 25/69 (36%), Positives = 34/69 (49%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
C ++ S+S RLLL+G D VWD L GH + V + + DG VA+G
Sbjct: 171 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 230
Query: 490 GKDRVLKLW 498
D LK+W
Sbjct: 231 SWDSFLKIW 239
Score = 105 (42.0 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 35/116 (30%), Positives = 51/116 (43%)
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGT 390
++V+ S D T LW+ +Q T TGH V + +PD + S + D S KLW+
Sbjct: 56 QIVTSSGDTTCALWDIETGQQTTT-FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVR 114
Query: 391 TGKFVAVFRGHVGPVYQIRFELIYCFRYPSN--FYCVVDMSCCMSLYSWSADSRLL 444
G F GH + I CF +P+ F D + C L+ AD L+
Sbjct: 115 EGMCRQTFTGHESDINAI------CF-FPNGNAFATGSDDATCR-LFDLRADQELM 162
Score = 105 (42.0 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 23/71 (32%), Positives = 34/71 (47%)
Query: 428 MSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 487
+SCC L D +++ S D+T +WDI T + GH +V ++ +PD
Sbjct: 46 LSCCRFL-----DDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFV 100
Query: 488 SGGKDRVLKLW 498
SG D KLW
Sbjct: 101 SGACDASAKLW 111
Score = 72 (30.4 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
+ GH ++ F D Q V S+ D + LW+ TG+ F GH G V +
Sbjct: 39 LAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFTGHTGDVMSL 90
Score = 46 (21.3 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 15/47 (31%), Positives = 22/47 (46%)
Query: 368 FSPDGQWVASASFDKSIKLWNGTTGKF-VAVFR---GHVGPVYQIRF 410
++P G +VA D ++N T + V V R GH G + RF
Sbjct: 5 YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF 51
Score = 44 (20.5 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 440 DSRLLLSGSKDSTLKVWD 457
D + +GS DS LK+W+
Sbjct: 223 DGMAVATGSWDSFLKIWN 240
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 243 (90.6 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 74/293 (25%), Positives = 135/293 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH + + F+P+ +QLA+GS D ++ +W+L + F+ GH + + + ++ G +
Sbjct: 16 GHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLV 75
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
S S+ ++ W P K H S VH + +R V+AS D ++W
Sbjct: 76 ASSSRDQTVRLWTPSI-KGESTVFKAHTA-----SVRSVHFSRDGQRLVTASDDKSVKVW 129
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
V +K + L+ HT V C ++ DG +I + D T+++W+T+ + I +G
Sbjct: 130 GVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSA 189
Query: 285 NSLAL-STEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG---NA----PER--LVS 334
+ S+ + + D+T K + +++ L ++ K+ N P L+S
Sbjct: 190 TFVDFNSSGTCIASSGADNTIKIW----DIRTNKLIQHYKVHNAGVNCFSFHPSGNYLIS 245
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
GS D T+ + + + T + GH+ V V FS DG AS D + +W
Sbjct: 246 GSSDSTIKILDLLEGRLIYT-LHGHKGPVLTVTFSRDGDLFASGGADSQVLMW 297
Score = 224 (83.9 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 64/220 (29%), Positives = 102/220 (46%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLW--DLNTQTPMFKCTG 148
++ + P R + GHT+ + V F+P G +AS S D TVRLW + ++ +FK
Sbjct: 44 IWNLAPKARAFRFV-GHTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKA-- 100
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA 208
H V + +S DG+ LV+ S ++ W + K + L+ H W+ + P
Sbjct: 101 HTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYS-LNRHTNWVRCARFSP----- 154
Query: 209 PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
R S D R+WD S +C+ + + + T V + G I + D TIK+W+
Sbjct: 155 DGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWD 214
Query: 268 TTQGKLIRELKGHGHWVNSLAL--STEYALRTGAFDHTGK 305
KLI+ K H VN + S Y + +G+ D T K
Sbjct: 215 IRTNKLIQHYKVHNAGVNCFSFHPSGNYLI-SGSSDSTIK 253
Score = 216 (81.1 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 53/181 (29%), Positives = 85/181 (46%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT +V SV FS DG++L + S D +V++W + + ++ H NWV C +S
Sbjct: 95 STVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSP 154
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ + S ++ WD + + N + + G S V N+ S+ D
Sbjct: 155 DGRLIASCGDDRTVRLWDTSSHQCI-NIFTDY-----GGSATFVDFNSSGTCIASSGADN 208
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
+IWD+ K + H V C + G + +GS D TIK+ + +G+LI L G
Sbjct: 209 TIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHG 268
Query: 280 H 280
H
Sbjct: 269 H 269
Score = 178 (67.7 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 51/184 (27%), Positives = 88/184 (47%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
+RLV+ SDD ++ +W K+ + H V FSPDG+ +AS D++++LW+
Sbjct: 115 QRLVTASDDKSVKVWG-VERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDT 173
Query: 390 TTGKFVAVFRGHVGPVYQIRFELI-YCFRYPS--NFYCVVDM------------SCCMSL 434
++ + + +F + G + F C N + D+ + ++
Sbjct: 174 SSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNC 233
Query: 435 YSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
+S+ L+SGS DST+K+ D+ +L L GH V V +S DG+ ASGG D
Sbjct: 234 FSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQ 293
Query: 495 LKLW 498
+ +W
Sbjct: 294 VLMW 297
Score = 171 (65.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 50/184 (27%), Positives = 82/184 (44%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
++L +GS D ++ +W A K R GH ++ V F+P G VAS+S D++++LW
Sbjct: 31 KQLATGSCDKSLMIWNLA-PKARAFRFVGHTDVITGVNFAPSGSLVASSSRDQTVRLWTP 89
Query: 390 TTGKFVAVFRGHVGPVYQIRFE-----LIYCFRYPS-NFYCVVDMSCCMSLY---SW--- 437
+ VF+ H V + F L+ S + V SL +W
Sbjct: 90 SIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRC 149
Query: 438 ---SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
S D RL+ S D T+++WD + + + VD++ G +AS G D
Sbjct: 150 ARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNT 209
Query: 495 LKLW 498
+K+W
Sbjct: 210 IKIW 213
Score = 147 (56.8 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 45/156 (28%), Positives = 74/156 (47%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF----ELI 413
GH+ +++ F+P+ + +A+ S DKS+ +WN F GH + + F L+
Sbjct: 16 GHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLV 75
Query: 414 ------YCFRY--PS-NFYCVVDMSCCMSLYS--WSADSRLLLSGSKDSTLKVWDIRTQK 462
R PS V + S+ S +S D + L++ S D ++KVW + +K
Sbjct: 76 ASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKK 135
Query: 463 LKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L H + V +SPDG +AS G DR ++LW
Sbjct: 136 FLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLW 171
>UNIPROTKB|Q9UNX4 [details] [associations]
symbol:WDR3 "WD repeat-containing protein 3" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 UniGene:Hs.310809
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD EMBL:AF083217 IPI:IPI00009471 RefSeq:NP_006775.1
ProteinModelPortal:Q9UNX4 SMR:Q9UNX4 IntAct:Q9UNX4
MINT:MINT-1401247 STRING:Q9UNX4 PhosphoSite:Q9UNX4 DMDM:12230773
SWISS-2DPAGE:Q9UNX4 PaxDb:Q9UNX4 PeptideAtlas:Q9UNX4 PRIDE:Q9UNX4
Ensembl:ENST00000349139 GeneID:10885 KEGG:hsa:10885 UCSC:uc010oxe.1
CTD:10885 GeneCards:GC01P118472 HGNC:HGNC:12755 HPA:HPA027509
MIM:604737 neXtProt:NX_Q9UNX4 PharmGKB:PA37359 HOVERGEN:HBG013192
InParanoid:Q9UNX4 OrthoDB:EOG412M4S PhylomeDB:Q9UNX4 ChiTaRS:WDR3
GenomeRNAi:10885 NextBio:41331 ArrayExpress:Q9UNX4 Bgee:Q9UNX4
CleanEx:HS_WDR3 Genevestigator:Q9UNX4 GermOnline:ENSG00000065183
Uniprot:Q9UNX4
Length = 943
Score = 176 (67.0 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 60/203 (29%), Positives = 92/203 (45%)
Query: 132 VRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGN-PLS 190
V +WDL + G K V C+ S DG HL G + G ++ + +G+ GN +
Sbjct: 47 VFIWDLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGE--GNVTFN 104
Query: 191 GHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG 250
GHK IT + ++ L R S SKD D +WDV + L GH A+T +
Sbjct: 105 GHKAAITTLKYD--QLGG---RLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLR 159
Query: 251 D-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGKQYS 308
+ ++ T +D +K W+ + + GH V L L S E L TGA D + +
Sbjct: 160 EKNLLVTSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLLSEEKRLITGASDSELRVWD 219
Query: 309 SP--EEMKKAALERYNKIKGNAP 329
+E++ KIKG++P
Sbjct: 220 IAYLQEIEDPEEPDPKKIKGSSP 242
Score = 169 (64.5 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 74/309 (23%), Positives = 131/309 (42%)
Query: 95 RPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
+PV TI GH V +++FS D + S + D+ +++W+ +T + T + L
Sbjct: 402 QPVRTSRITIGGHRSDVRTLSFSSDNIAVLSAAADS-IKIWNRSTLQCIRTMTCE--YAL 458
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
C + + +V G+K G+LQ +D +G + H + +S P
Sbjct: 459 CSFFVPGDRQVVIGTKTGKLQLYDLASGNLL-ETIDAHDGALWSMSLSPDQRGFVTGGAD 517
Query: 215 SASKDGDARIW--DVSLRKCVICLSGHTLA----VTCVKWGGDGVIYTGSQ-DCTIKVWE 267
+ K D + + S +K + TL V CV + + + S DCT+K++
Sbjct: 518 KSVKFWDFELVKDENSTQKRLSVKQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKIFY 577
Query: 268 TTQGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSP-EEMKKAALERYNKIK 325
K L GH V + +S + AL TG+ D K + + K+ + +
Sbjct: 578 VDTLKFFLSLYGHKLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVM 637
Query: 326 --GNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
P+ + D + W+ + +T + GH Q + + SP G +V S+S D
Sbjct: 638 YLQFVPKSHLFFTAGKDHKIKQWDADKFEHIQT-LEGHHQEIWCLAVSPSGDYVVSSSHD 696
Query: 382 KSIKLWNGT 390
KS++LW T
Sbjct: 697 KSLRLWERT 705
Score = 164 (62.8 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 55/194 (28%), Positives = 91/194 (46%)
Query: 109 EAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSG 168
E VL V++SP+ + LA D TV+++ ++T GHK V+C+ S DG + +G
Sbjct: 550 EDVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISHDGALIATG 609
Query: 169 SKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV-HLNAPCRRFVSASKDGDARIWDV 227
S ++ W G L H + + + P HL F +A KD + WD
Sbjct: 610 SADRNVKIWGLDFGD-CHKSLFAHDDSVMYLQFVPKSHL------FFTAGKDHKIKQWDA 662
Query: 228 SLRKCVICLSGHTLAVTC--VKWGGDGVIYTGSQDCTIKVWETTQGKLI----RELKGHG 281
+ + L GH + C V GD V+ + S D ++++WE T+ LI RE++
Sbjct: 663 DKFEHIQTLEGHHQEIWCLAVSPSGDYVV-SSSHDKSLRLWERTREPLILEEEREMEREA 721
Query: 282 HWVNSLALSTEYAL 295
+ S+A + A+
Sbjct: 722 EYEESVAKEDQPAV 735
Score = 148 (57.2 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 33/128 (25%), Positives = 68/128 (53%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
+ T GH A+ ++ + G +LASGS DT + +WD+ ++ +++ GHK+ + +
Sbjct: 100 NVTFNGHKAAITTLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLR 159
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+ LV+ K ++ WD T + + GH+ + G+ V L+ +R ++ + D
Sbjct: 160 EKNLLVTSGKDTMVKWWDLDT-QHCFKTMVGHRTEVWGL----VLLSEE-KRLITGASDS 213
Query: 221 DARIWDVS 228
+ R+WD++
Sbjct: 214 ELRVWDIA 221
Score = 146 (56.5 bits), Expect = 2.3e-14, Sum P(3) = 2.3e-14
Identities = 47/166 (28%), Positives = 74/166 (44%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ G + V + SPDG LA G D ++R++ L + GHK + + + G
Sbjct: 61 LQGLKQEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAITTLKYDQLGG 120
Query: 164 HLVSGSKAGELQCWDPQTGKPSG-NPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
L SGSK ++ WD SG L GHK IT + + L V++ KD
Sbjct: 121 RLASGSKDTDIIVWD--VINESGLYRLKGHKDAIT----QALFLREK-NLLVTSGKDTMV 173
Query: 223 RIWDVSLRKCVICLSGHTLAVT-CVKWGGDGVIYTGSQDCTIKVWE 267
+ WD+ + C + GH V V + + TG+ D ++VW+
Sbjct: 174 KWWDLDTQHCFKTMVGHRTEVWGLVLLSEEKRLITGASDSELRVWD 219
Score = 110 (43.8 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 46/164 (28%), Positives = 70/164 (42%)
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVY--Q 407
KQ +T L V +SP+ + +A + D ++K++ T KF GH PV
Sbjct: 541 KQTRTLQLDEDVLC--VSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMD 598
Query: 408 IRFE--LIYCFRYPSNFYCV-VDMSCC-MSLYS---------WSADSRLLLSGSKDSTLK 454
I + LI N +D C SL++ + S L + KD +K
Sbjct: 599 ISHDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQFVPKSHLFFTAGKDHKIK 658
Query: 455 VWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
WD + Q L GH E++ + SP G+ V S D+ L+LW
Sbjct: 659 QWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLW 702
Score = 104 (41.7 bits), Expect = 8.4e-10, Sum P(3) = 8.4e-10
Identities = 43/178 (24%), Positives = 79/178 (44%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
WD + G+ L G K+ +T + P L+ +DG RI+ + + +
Sbjct: 50 WDLRKGEKI-LILQGLKQEVTCLCPSPDGLH-----LAVGYEDGSIRIFSLLSGEGNVTF 103
Query: 237 SGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVN-SLALSTEYA 294
+GH A+T +K+ G + +GS+D I VW+ + LKGH + +L L +
Sbjct: 104 NGHKAAITTLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNL 163
Query: 295 LRTGAFDHTGKQYS-SPEEMKKAALERYNKIKG----NAPERLVSGSDDFTMFLWEPA 347
L T D K + + K + ++ G + +RL++G+ D + +W+ A
Sbjct: 164 LVTSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLLSEEKRLITGASDSELRVWDIA 221
Score = 101 (40.6 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 420 SNFYCVVDMSCCMSLYSWSADS-RLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 478
S C+ M+C +L S+ R ++ G+K L+++D+ + L + + H ++++
Sbjct: 444 STLQCIRTMTCEYALCSFFVPGDRQVVIGTKTGKLQLYDLASGNLLETIDAHDGALWSMS 503
Query: 479 WSPDGEKVASGGKDRVLKLW 498
SPD +GG D+ +K W
Sbjct: 504 LSPDQRGFVTGGADKSVKFW 523
Score = 75 (31.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 42/185 (22%), Positives = 76/185 (41%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQ 270
R+V+ IWD+ + ++ L G VTC+ DG+ + G +D +I+++
Sbjct: 37 RYVAVPACEHVFIWDLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGSIRIFSLLS 96
Query: 271 GKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA- 328
G+ GH + +L L +G+ D + E L+ + A
Sbjct: 97 GEGNVTFNGHKAAITTLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQAL 156
Query: 329 --PER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV-NHVYFSPDGQWVASASFDKS 383
E+ LV+ D TM W ++ M GH+ V V S + + + AS D
Sbjct: 157 FLREKNLLVTSGKD-TMVKWWDLDTQHCFKTMVGHRTEVWGLVLLSEEKRLITGAS-DSE 214
Query: 384 IKLWN 388
+++W+
Sbjct: 215 LRVWD 219
Score = 69 (29.3 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 11/38 (28%), Positives = 22/38 (57%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDL 137
C T+ GH V + + ++L +G+ D+ +R+WD+
Sbjct: 183 CFKTMVGHRTEVWGLVLLSEEKRLITGASDSELRVWDI 220
Score = 66 (28.3 bits), Expect = 1.1e-17, Sum P(3) = 1.1e-17
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 341 MFLWEPAV-SKQP--KTRMT--GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
++ P++ + QP +R+T GH+ V + FS D V SA+ D SIK+WN +T
Sbjct: 391 LYSLNPSLPTPQPVRTSRITIGGHRSDVRTLSFSSDNIAVLSAAAD-SIKIWNRST 445
Score = 51 (23.0 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 458 IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+RT ++ + GH +V + +S D V S D + K+W
Sbjct: 404 VRTSRIT--IGGHRSDVRTLSFSSDNIAVLSAAADSI-KIW 441
Score = 44 (20.5 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 26/120 (21%), Positives = 48/120 (40%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF-ELIYCF 416
GH+ V + S DG +A+ S D+++K+W G H V ++F + F
Sbjct: 589 GHKLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQFVPKSHLF 648
Query: 417 RYPSNFYCVVDMSC-----CMSLYS-----W----SADSRLLLSGSKDSTLKVWDIRTQK 462
+ + +L W S ++S S D +L++W+ RT++
Sbjct: 649 FTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWE-RTRE 707
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 182 (69.1 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 73/279 (26%), Positives = 126/279 (45%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC---- 146
VF + N C + GHT+ +LS+ G A+ + D +VR+W ++ + C
Sbjct: 371 VFELS-TNSCQI-LHGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQG 428
Query: 147 TGHKNWVLCIAWSA-DGKHLVSGSKAGELQCWD-PQTGKPSGNPLSGHKKWITGISWEPV 204
TGH N V IA S + +VSGS+ ++ WD P+T G + K T + E
Sbjct: 429 TGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMM--KARSTERAHEK- 485
Query: 205 HLNAPC-----RRFVSASKDGDARIWDVS-LRKCVICLSGHTLAVTCVKWGG-DGVIYTG 257
+N+ C + S S+D A++W +S LR +C GH V V++ D ++ +
Sbjct: 486 DVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVC-RGHRRGVWSVQFSPVDQILGSA 544
Query: 258 SQDCTIKVWETTQGKLIRELKGHGHWVNSLA-LSTEYALRTGAFDHTGKQYS-SPEEMKK 315
S D ++++W ++ +GH V + +S L + D K ++ E +
Sbjct: 545 SADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTNECVR 604
Query: 316 AALERYNKI----KGNAPERLVSGSDDFTMFLWEPAVSK 350
+K+ G E +V+GS D T+ +W + K
Sbjct: 605 TLDAHQDKVWALHGGCRDELMVTGSADSTITVWTDKLRK 643
Score = 173 (66.0 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 100/381 (26%), Positives = 162/381 (42%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW-SADGKHLVSGS 169
+L + P +L + + + + L+ T + G+ + VL + + D H+ +
Sbjct: 305 LLQLLLLPRTGRLITVTAEHNILLYQTPTLAVQQQFVGYNDDVLDVKFVGKDDTHIAVAT 364
Query: 170 KAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW--DV 227
+ +L+ ++ T S L GH I I V F + +KD R+W DV
Sbjct: 365 NSSQLKVFELSTN--SCQILHGHTDTILSID---VFRKGSM--FATCAKDKSVRVWRMDV 417
Query: 228 SLRK--CVICLSGHTLAV---TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
S + CV +GH+ AV C + V+ +GSQDCT+KVW+ + E G
Sbjct: 418 SSGRVHCVAQGTGHSNAVGSIACSRMKQQFVV-SGSQDCTVKVWD------LPETTGAEG 470
Query: 283 WVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMF 342
+ A STE A H +++ + +K+ L SGS D T
Sbjct: 471 VMMMKARSTERA-------HE-------KDVNSVCVSPNDKL-------LASGSQDRTAK 509
Query: 343 LWEPAVSKQPKTRMT-GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
LW A+S + GH++ V V FSP Q + SAS D S+++W+ + F GH
Sbjct: 510 LW--ALSDLRLLGVCRGHRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSCLKTFEGH 567
Query: 402 VGPVYQIRFE-------------LIYCFRYPSNFYCVVDMSC----CMSLYSWSADSRLL 444
V +I F L+ + +N CV + +L+ D L+
Sbjct: 568 DASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTN-ECVRTLDAHQDKVWALHGGCRDE-LM 625
Query: 445 LSGSKDSTLKVWDIRTQKLKQ 465
++GS DST+ VW T KL++
Sbjct: 626 VTGSADSTITVW---TDKLRK 643
Score = 161 (61.7 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 52/190 (27%), Positives = 89/190 (46%)
Query: 332 LVSGSDDFTMFLWE-PAVS-----KQPKTRMT--GHQQLVNHVYFSPDGQWVASASFDKS 383
+VSGS D T+ +W+ P + K R T H++ VN V SP+ + +AS S D++
Sbjct: 448 VVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDKLLASGSQDRT 507
Query: 384 IKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSN------FYCVVDMSCCMSLYSW 437
KLW + + + V RGH V+ ++F + ++ + + D SC +
Sbjct: 508 AKLWALSDLRLLGVCRGHRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSCLKTFEGH 567
Query: 438 SAD-------SR--LLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVAS 488
A SR L+S D +K+W I+T + + L H D+V+A+ E + +
Sbjct: 568 DASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTNECVRTLDAHQDKVWALHGGCRDELMVT 627
Query: 489 GGKDRVLKLW 498
G D + +W
Sbjct: 628 GSADSTITVW 637
Score = 144 (55.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 98/429 (22%), Positives = 174/429 (40%)
Query: 105 AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH 164
A H+ V S++F LA+G D T++LWD+ Q G V + + D
Sbjct: 103 AVHSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISR 162
Query: 165 L--VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
L S S ++ WD ++ + L H +T +++ P VS+ +D
Sbjct: 163 LQLFSSSSDCAIRIWDLRSSR-CVCVLESHYSPVTALAFSP-----DGHTLVSSGRDKIC 216
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRE-LKGHG 281
+WD+ +K + + AV V V+ +GS D + ++ L+ KG
Sbjct: 217 SVWDLQEQKVKRTIPVYE-AVEGV------VLLSGSADYSEMGVKSDALHLVTAGSKGVL 269
Query: 282 H-WVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFT 340
W +S + A HT + + EE + L + + RL++ + +
Sbjct: 270 RVWDSSSSRCVFTQTLPDASSHTEDEDAEDEE--RLGLLQLLLLPRTG--RLITVTAEHN 325
Query: 341 MFLWE-PAVSKQPKTRMTGHQQLVNHVYF-SPDGQWVASASFDKSIKLWNGTTGKFVAVF 398
+ L++ P ++ Q + G+ V V F D +A A+ +K++ +T +
Sbjct: 326 ILLYQTPTLAVQQQ--FVGYNDDVLDVKFVGKDDTHIAVATNSSQLKVFELSTNS-CQIL 382
Query: 399 RGHVGPVYQI---RFELIY--CFRYPS-----------NFYCVVDMSCCMSLYSWSADSR 442
GH + I R ++ C + S +CV + + A SR
Sbjct: 383 HGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSR 442
Query: 443 L----LLSGSKDSTLKVWD---------IRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
+ ++SGS+D T+KVWD + K + H +V +V SP+ + +ASG
Sbjct: 443 MKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDKLLASG 502
Query: 490 GKDRVLKLW 498
+DR KLW
Sbjct: 503 SQDRTAKLW 511
Score = 139 (54.0 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 41/141 (29%), Positives = 60/141 (42%)
Query: 100 CSATIAGHTEAVLSVAFSPD-GR-QLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
C+ + G + V V F PD R QL S S D +R+WDL + + H + V +A
Sbjct: 140 CTHNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALA 199
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGK-----PSGNPLSGHKKWITGISWEPVHLNAPCRR 212
+S DG LVS + WD Q K P + G + + + +
Sbjct: 200 FSPDGHTLVSSGRDKICSVWDLQEQKVKRTIPVYEAVEGVVLLSGSADYSEMGVKSDALH 259
Query: 213 FVSASKDGDARIWDVSLRKCV 233
V+A G R+WD S +CV
Sbjct: 260 LVTAGSKGVLRVWDSSSSRCV 280
Score = 137 (53.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 43/134 (32%), Positives = 60/134 (44%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH V SV FSP + L S S D +VR+W + + + GH VL I + + G L
Sbjct: 524 GHRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQL 583
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRR--FVSASKDGDAR 223
VS G ++ W +T + L H+ + W L+ CR V+ S D
Sbjct: 584 VSSGSDGLVKLWTIKTNE-CVRTLDAHQDKV----WA---LHGGCRDELMVTGSADSTIT 635
Query: 224 IWDVSLRKCVICLS 237
+W LRK VI S
Sbjct: 636 VWTDKLRKTVIIKS 649
Score = 135 (52.6 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 46/192 (23%), Positives = 86/192 (44%)
Query: 153 VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRR 212
+ A S D + LVS S+A L+ WD + + + + H + +S++
Sbjct: 66 ITAFALSPDDEMLVSASRALLLRQWDWKQQQCRRSWRAVHSVPVASMSFD-----CTSTL 120
Query: 213 FVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV---IYTGSQDCTIKVWETT 269
+ DG ++WDV + C L G + V V++ D +++ S DC I++W+
Sbjct: 121 LATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIWDLR 180
Query: 270 QGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA 328
+ + L+ H V +LA S + + L + D + E+ K + Y ++G
Sbjct: 181 SSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKVKRTIPVYEAVEGVV 240
Query: 329 PERLVSGSDDFT 340
L+SGS D++
Sbjct: 241 ---LLSGSADYS 249
Score = 132 (51.5 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
Identities = 43/171 (25%), Positives = 70/171 (40%)
Query: 109 EAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTG-HKNWVLCIAWSADGKHLVS 167
E + + A SPD L S S +R WD Q H V +++ L +
Sbjct: 64 EDITAFALSPDDEMLVSASRALLLRQWDWKQQQCRRSWRAVHSVPVASMSFDCTSTLLAT 123
Query: 168 GSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDV 227
G G ++ WD + N L G + + + P + + S+S D RIWD+
Sbjct: 124 GGCDGTIKLWDVIKQYCTHN-LKGSSGVVHLVEFHP---DISRLQLFSSSSDCAIRIWDL 179
Query: 228 SLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIREL 277
+CV L H VT + + DG + + +D VW+ + K+ R +
Sbjct: 180 RSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKVKRTI 230
Score = 104 (41.7 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 29/100 (29%), Positives = 44/100 (44%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT-----PMFKCTGHKNW 152
+RC + H V ++AFSPDG L S D +WDL Q P+++
Sbjct: 182 SRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKVKRTIPVYEAV---EG 238
Query: 153 VLCIAWSAD---------GKHLVSGSKAGELQCWDPQTGK 183
V+ ++ SAD HLV+ G L+ WD + +
Sbjct: 239 VVLLSGSADYSEMGVKSDALHLVTAGSKGVLRVWDSSSSR 278
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 240 (89.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 81/272 (29%), Positives = 124/272 (45%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
LSGH VT V + V+ + S+D TIKVW+ G R LKGH V ++ T
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYN----KIKGNAPERLVSGSDDFTMFLWEPA 347
L + + D T K + E ++ +N I N + +VS S D T+ +WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
KT TGH++ V V + DG +AS S D+++++W T + A R H
Sbjct: 223 TGYCVKT-FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE----- 276
Query: 408 IRFELIYCFRY-PSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQD 466
++ C + P + Y + + LLSGS+D T+K+WDI T
Sbjct: 277 ---HVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMT 333
Query: 467 LPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L GH + V V + G+ + S D+ L++W
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Score = 238 (88.8 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDISTGMCLMTLVGHDNWVRGV 344
Score = 226 (84.6 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 65/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSTISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WD+S C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 197 (74.4 bits), Expect = 5.9e-16, Sum P(2) = 5.9e-16
Identities = 59/204 (28%), Positives = 93/204 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTEYALRTGAFDHTGKQ 306
V ++ + E + T + + TG +
Sbjct: 278 VVECISWAPESSYSTIS-EATGSE 300
Score = 193 (73.0 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 57/189 (30%), Positives = 87/189 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T GH E V V + DG +AS S D TVR+W + T+ + H++ V CI+W+
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Query: 160 AD--------------------GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ G L+SGS+ ++ WD TG L GH W+ G+
Sbjct: 286 PESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMT-LVGHDNWVRGV 344
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGS 258
+ H + +S + D R+WD ++C+ L+ H VT + + + TGS
Sbjct: 345 LF---HSGG--KFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 259 QDCTIKVWE 267
D T+KVWE
Sbjct: 400 VDQTVKVWE 408
Score = 167 (63.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 55/211 (26%), Positives = 97/211 (45%)
Query: 305 KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP-KTRMTGHQQLV 363
K+++S ++K +E +K+ A E SG + + + P K ++GH+ V
Sbjct: 53 KKWTSVIRLQKKVMELESKLN-EAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPV 111
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----LIYCFRY 418
V F P + SAS D +IK+W+ TG F +GH V I F+ L C
Sbjct: 112 TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSAD 171
Query: 419 PS-------NFYCVVDM---SCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP 468
+ F C+ M +S + + ++S S+D T+K+W+++T +
Sbjct: 172 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT 231
Query: 469 GHADEVFAVDWSPDGEKVASGGKDRVLKLWM 499
GH + V V + DG +AS D+ +++W+
Sbjct: 232 GHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Score = 165 (63.1 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 59/228 (25%), Positives = 107/228 (46%)
Query: 177 WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
W P+ P LSGH+ +T + + PV VSAS+D ++WD L
Sbjct: 94 WIPRP--PEKYALSGHRSPVTRVIFHPVF-----SVMVSASEDATIKVWDYETGDFERTL 146
Query: 237 SGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
GHT +V + + G + S D TIK+W+ + IR + GH H V+S+A+
Sbjct: 147 KGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDH 206
Query: 295 LRTGAFDHTGKQYSSPEE--MKKAALER--YNKIKGNAPERLVSG-SDDFTMFLWEPAVS 349
+ + + D T K + +K R ++ N L++ S+D T+ +W A +
Sbjct: 207 IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA-T 265
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQW--VASASFDKSIKLWNGTTGKFV 395
K+ K + H+ +V + ++P+ + ++ A+ ++ K +G G F+
Sbjct: 266 KECKAELREHEHVVECISWAPESSYSTISEATGSETKK--SGKPGPFL 311
Score = 152 (58.6 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HTG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
Score = 72 (30.4 bits), Expect = 5.9e-16, Sum P(2) = 5.9e-16
Identities = 33/131 (25%), Positives = 57/131 (43%)
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W P S + TG + + P G ++ S S DK+IK+W+ +TG + GH
Sbjct: 284 WAPESSYSTISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDN 339
Query: 404 PVYQIRFE-----LIYCFRYPS-NFYCVVDMSCCMSL-----YSWSAD----SRLLLSGS 448
V + F ++ C + + + C +L + S D + +++GS
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 449 KDSTLKVWDIR 459
D T+KVW+ R
Sbjct: 400 VDQTVKVWECR 410
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 240 (89.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 233 (87.1 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 79/272 (29%), Positives = 124/272 (45%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
LSGH VT V + V+ + S+D TIKVW+ G R LKGH V ++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYN----KIKGNAPERLVSGSDDFTMFLWEPA 347
L + + D T K + E ++ +N I N + +VS S D T+ +WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
KT TGH++ V V + DG +AS S D+++++W T + A R H
Sbjct: 223 TGYCVKT-FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE----- 276
Query: 408 IRFELIYCFRY-PSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQD 466
++ C + P + Y + + LLSGS+D T+K+WD+ T
Sbjct: 277 ---HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 333
Query: 467 LPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L GH + V V + G+ + S D+ L++W
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Score = 227 (85.0 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 195 (73.7 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 194 (73.4 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 57/189 (30%), Positives = 87/189 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T GH E V V + DG +AS S D TVR+W + T+ + H++ V CI+W+
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Query: 160 AD--------------------GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ G L+SGS+ ++ WD TG L GH W+ G+
Sbjct: 286 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGV 344
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGS 258
+ H + +S + D R+WD ++C+ L+ H VT + + + TGS
Sbjct: 345 LF---HSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 259 QDCTIKVWE 267
D T+KVWE
Sbjct: 400 VDQTVKVWE 408
Score = 167 (63.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 55/211 (26%), Positives = 97/211 (45%)
Query: 305 KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP-KTRMTGHQQLV 363
K+++S ++K +E +K+ A E SG + + + P K ++GH+ V
Sbjct: 53 KKWTSVIRLQKKVMELESKLN-EAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPV 111
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----LIYCFRY 418
V F P + SAS D +IK+W+ TG F +GH V I F+ L C
Sbjct: 112 TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD 171
Query: 419 PS-------NFYCVVDM---SCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP 468
+ F C+ M +S + + ++S S+D T+K+W+++T +
Sbjct: 172 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT 231
Query: 469 GHADEVFAVDWSPDGEKVASGGKDRVLKLWM 499
GH + V V + DG +AS D+ +++W+
Sbjct: 232 GHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Score = 151 (58.2 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
Score = 74 (31.1 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 32/132 (24%), Positives = 58/132 (43%)
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W P S + TG + + P G ++ S S DK+IK+W+ +TG + GH
Sbjct: 284 WAPESSYSSISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 404 PVYQIRFE-----LIYC--------FRYPSNFYCVVDMSC---CMSLYSWSADSRLLLSG 447
V + F ++ C + Y N C+ ++ ++ + + +++G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDY-KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Query: 448 SKDSTLKVWDIR 459
S D T+KVW+ R
Sbjct: 399 SVDQTVKVWECR 410
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 240 (89.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 233 (87.1 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 79/272 (29%), Positives = 124/272 (45%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
LSGH VT V + V+ + S+D TIKVW+ G R LKGH V ++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYN----KIKGNAPERLVSGSDDFTMFLWEPA 347
L + + D T K + E ++ +N I N + +VS S D T+ +WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
KT TGH++ V V + DG +AS S D+++++W T + A R H
Sbjct: 223 TGYCVKT-FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE----- 276
Query: 408 IRFELIYCFRY-PSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQD 466
++ C + P + Y + + LLSGS+D T+K+WD+ T
Sbjct: 277 ---HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 333
Query: 467 LPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L GH + V V + G+ + S D+ L++W
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Score = 227 (85.0 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 195 (73.7 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 194 (73.4 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 57/189 (30%), Positives = 87/189 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T GH E V V + DG +AS S D TVR+W + T+ + H++ V CI+W+
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Query: 160 AD--------------------GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ G L+SGS+ ++ WD TG L GH W+ G+
Sbjct: 286 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGV 344
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGS 258
+ H + +S + D R+WD ++C+ L+ H VT + + + TGS
Sbjct: 345 LF---HSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 259 QDCTIKVWE 267
D T+KVWE
Sbjct: 400 VDQTVKVWE 408
Score = 167 (63.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 55/211 (26%), Positives = 97/211 (45%)
Query: 305 KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP-KTRMTGHQQLV 363
K+++S ++K +E +K+ A E SG + + + P K ++GH+ V
Sbjct: 53 KKWTSVIRLQKKVMELESKLN-EAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPV 111
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----LIYCFRY 418
V F P + SAS D +IK+W+ TG F +GH V I F+ L C
Sbjct: 112 TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD 171
Query: 419 PS-------NFYCVVDM---SCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP 468
+ F C+ M +S + + ++S S+D T+K+W+++T +
Sbjct: 172 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT 231
Query: 469 GHADEVFAVDWSPDGEKVASGGKDRVLKLWM 499
GH + V V + DG +AS D+ +++W+
Sbjct: 232 GHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Score = 151 (58.2 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
Score = 74 (31.1 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 32/132 (24%), Positives = 58/132 (43%)
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W P S + TG + + P G ++ S S DK+IK+W+ +TG + GH
Sbjct: 284 WAPESSYSSISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 404 PVYQIRFE-----LIYC--------FRYPSNFYCVVDMSC---CMSLYSWSADSRLLLSG 447
V + F ++ C + Y N C+ ++ ++ + + +++G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDY-KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Query: 448 SKDSTLKVWDIR 459
S D T+KVW+ R
Sbjct: 399 SVDQTVKVWECR 410
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 240 (89.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 233 (87.1 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 79/272 (29%), Positives = 124/272 (45%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
LSGH VT V + V+ + S+D TIKVW+ G R LKGH V ++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYN----KIKGNAPERLVSGSDDFTMFLWEPA 347
L + + D T K + E ++ +N I N + +VS S D T+ +WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
KT TGH++ V V + DG +AS S D+++++W T + A R H
Sbjct: 223 TGYCVKT-FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE----- 276
Query: 408 IRFELIYCFRY-PSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQD 466
++ C + P + Y + + LLSGS+D T+K+WD+ T
Sbjct: 277 ---HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 333
Query: 467 LPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L GH + V V + G+ + S D+ L++W
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Score = 227 (85.0 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 195 (73.7 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 194 (73.4 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 57/189 (30%), Positives = 87/189 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T GH E V V + DG +AS S D TVR+W + T+ + H++ V CI+W+
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Query: 160 AD--------------------GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ G L+SGS+ ++ WD TG L GH W+ G+
Sbjct: 286 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGV 344
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGS 258
+ H + +S + D R+WD ++C+ L+ H VT + + + TGS
Sbjct: 345 LF---HSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 259 QDCTIKVWE 267
D T+KVWE
Sbjct: 400 VDQTVKVWE 408
Score = 167 (63.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 55/211 (26%), Positives = 97/211 (45%)
Query: 305 KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP-KTRMTGHQQLV 363
K+++S ++K +E +K+ A E SG + + + P K ++GH+ V
Sbjct: 53 KKWTSVIRLQKKVMELESKLN-EAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPV 111
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----LIYCFRY 418
V F P + SAS D +IK+W+ TG F +GH V I F+ L C
Sbjct: 112 TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD 171
Query: 419 PS-------NFYCVVDM---SCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP 468
+ F C+ M +S + + ++S S+D T+K+W+++T +
Sbjct: 172 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT 231
Query: 469 GHADEVFAVDWSPDGEKVASGGKDRVLKLWM 499
GH + V V + DG +AS D+ +++W+
Sbjct: 232 GHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Score = 151 (58.2 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
Score = 74 (31.1 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 32/132 (24%), Positives = 58/132 (43%)
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W P S + TG + + P G ++ S S DK+IK+W+ +TG + GH
Sbjct: 284 WAPESSYSSISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 404 PVYQIRFE-----LIYC--------FRYPSNFYCVVDMSC---CMSLYSWSADSRLLLSG 447
V + F ++ C + Y N C+ ++ ++ + + +++G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDY-KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Query: 448 SKDSTLKVWDIR 459
S D T+KVW+ R
Sbjct: 399 SVDQTVKVWECR 410
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 240 (89.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 233 (87.1 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 79/272 (29%), Positives = 124/272 (45%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
LSGH VT V + V+ + S+D TIKVW+ G R LKGH V ++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYN----KIKGNAPERLVSGSDDFTMFLWEPA 347
L + + D T K + E ++ +N I N + +VS S D T+ +WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
KT TGH++ V V + DG +AS S D+++++W T + A R H
Sbjct: 223 TGYCVKT-FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE----- 276
Query: 408 IRFELIYCFRY-PSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQD 466
++ C + P + Y + + LLSGS+D T+K+WD+ T
Sbjct: 277 ---HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 333
Query: 467 LPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L GH + V V + G+ + S D+ L++W
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Score = 227 (85.0 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 195 (73.7 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 194 (73.4 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 57/189 (30%), Positives = 87/189 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T GH E V V + DG +AS S D TVR+W + T+ + H++ V CI+W+
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Query: 160 AD--------------------GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ G L+SGS+ ++ WD TG L GH W+ G+
Sbjct: 286 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGV 344
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGS 258
+ H + +S + D R+WD ++C+ L+ H VT + + + TGS
Sbjct: 345 LF---HSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 259 QDCTIKVWE 267
D T+KVWE
Sbjct: 400 VDQTVKVWE 408
Score = 167 (63.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 55/211 (26%), Positives = 97/211 (45%)
Query: 305 KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP-KTRMTGHQQLV 363
K+++S ++K +E +K+ A E SG + + + P K ++GH+ V
Sbjct: 53 KKWTSVIRLQKKVMELESKLN-EAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPV 111
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----LIYCFRY 418
V F P + SAS D +IK+W+ TG F +GH V I F+ L C
Sbjct: 112 TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD 171
Query: 419 PS-------NFYCVVDM---SCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP 468
+ F C+ M +S + + ++S S+D T+K+W+++T +
Sbjct: 172 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT 231
Query: 469 GHADEVFAVDWSPDGEKVASGGKDRVLKLWM 499
GH + V V + DG +AS D+ +++W+
Sbjct: 232 GHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Score = 151 (58.2 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
Score = 74 (31.1 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 32/132 (24%), Positives = 58/132 (43%)
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W P S + TG + + P G ++ S S DK+IK+W+ +TG + GH
Sbjct: 284 WAPESSYSSISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 404 PVYQIRFE-----LIYC--------FRYPSNFYCVVDMSC---CMSLYSWSADSRLLLSG 447
V + F ++ C + Y N C+ ++ ++ + + +++G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDY-KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Query: 448 SKDSTLKVWDIR 459
S D T+KVW+ R
Sbjct: 399 SVDQTVKVWECR 410
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 240 (89.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 233 (87.1 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 79/272 (29%), Positives = 124/272 (45%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
LSGH VT V + V+ + S+D TIKVW+ G R LKGH V ++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYN----KIKGNAPERLVSGSDDFTMFLWEPA 347
L + + D T K + E ++ +N I N + +VS S D T+ +WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
KT TGH++ V V + DG +AS S D+++++W T + A R H
Sbjct: 223 TGYCVKT-FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE----- 276
Query: 408 IRFELIYCFRY-PSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQD 466
++ C + P + Y + + LLSGS+D T+K+WD+ T
Sbjct: 277 ---HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 333
Query: 467 LPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L GH + V V + G+ + S D+ L++W
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Score = 227 (85.0 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 195 (73.7 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 194 (73.4 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 57/189 (30%), Positives = 87/189 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T GH E V V + DG +AS S D TVR+W + T+ + H++ V CI+W+
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Query: 160 AD--------------------GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ G L+SGS+ ++ WD TG L GH W+ G+
Sbjct: 286 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGV 344
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGS 258
+ H + +S + D R+WD ++C+ L+ H VT + + + TGS
Sbjct: 345 LF---HSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 259 QDCTIKVWE 267
D T+KVWE
Sbjct: 400 VDQTVKVWE 408
Score = 167 (63.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 55/211 (26%), Positives = 97/211 (45%)
Query: 305 KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP-KTRMTGHQQLV 363
K+++S ++K +E +K+ A E SG + + + P K ++GH+ V
Sbjct: 53 KKWTSVIRLQKKVMELESKLN-EAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPV 111
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----LIYCFRY 418
V F P + SAS D +IK+W+ TG F +GH V I F+ L C
Sbjct: 112 TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD 171
Query: 419 PS-------NFYCVVDM---SCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP 468
+ F C+ M +S + + ++S S+D T+K+W+++T +
Sbjct: 172 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT 231
Query: 469 GHADEVFAVDWSPDGEKVASGGKDRVLKLWM 499
GH + V V + DG +AS D+ +++W+
Sbjct: 232 GHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Score = 151 (58.2 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
Score = 74 (31.1 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 32/132 (24%), Positives = 58/132 (43%)
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W P S + TG + + P G ++ S S DK+IK+W+ +TG + GH
Sbjct: 284 WAPESSYSSISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 404 PVYQIRFE-----LIYC--------FRYPSNFYCVVDMSC---CMSLYSWSADSRLLLSG 447
V + F ++ C + Y N C+ ++ ++ + + +++G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDY-KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Query: 448 SKDSTLKVWDIR 459
S D T+KVW+ R
Sbjct: 399 SVDQTVKVWECR 410
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 240 (89.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 233 (87.1 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 79/272 (29%), Positives = 124/272 (45%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
LSGH VT V + V+ + S+D TIKVW+ G R LKGH V ++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYN----KIKGNAPERLVSGSDDFTMFLWEPA 347
L + + D T K + E ++ +N I N + +VS S D T+ +WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
KT TGH++ V V + DG +AS S D+++++W T + A R H
Sbjct: 223 TGYCVKT-FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE----- 276
Query: 408 IRFELIYCFRY-PSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQD 466
++ C + P + Y + + LLSGS+D T+K+WD+ T
Sbjct: 277 ---HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 333
Query: 467 LPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L GH + V V + G+ + S D+ L++W
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Score = 227 (85.0 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 195 (73.7 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 194 (73.4 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 57/189 (30%), Positives = 87/189 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T GH E V V + DG +AS S D TVR+W + T+ + H++ V CI+W+
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Query: 160 AD--------------------GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ G L+SGS+ ++ WD TG L GH W+ G+
Sbjct: 286 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGV 344
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGS 258
+ H + +S + D R+WD ++C+ L+ H VT + + + TGS
Sbjct: 345 LF---HSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 259 QDCTIKVWE 267
D T+KVWE
Sbjct: 400 VDQTVKVWE 408
Score = 167 (63.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 55/211 (26%), Positives = 97/211 (45%)
Query: 305 KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP-KTRMTGHQQLV 363
K+++S ++K +E +K+ A E SG + + + P K ++GH+ V
Sbjct: 53 KKWTSVIRLQKKVMELESKLN-EAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPV 111
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----LIYCFRY 418
V F P + SAS D +IK+W+ TG F +GH V I F+ L C
Sbjct: 112 TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD 171
Query: 419 PS-------NFYCVVDM---SCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP 468
+ F C+ M +S + + ++S S+D T+K+W+++T +
Sbjct: 172 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT 231
Query: 469 GHADEVFAVDWSPDGEKVASGGKDRVLKLWM 499
GH + V V + DG +AS D+ +++W+
Sbjct: 232 GHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Score = 151 (58.2 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
Score = 74 (31.1 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 32/132 (24%), Positives = 58/132 (43%)
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W P S + TG + + P G ++ S S DK+IK+W+ +TG + GH
Sbjct: 284 WAPESSYSSISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 404 PVYQIRFE-----LIYC--------FRYPSNFYCVVDMSC---CMSLYSWSADSRLLLSG 447
V + F ++ C + Y N C+ ++ ++ + + +++G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDY-KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Query: 448 SKDSTLKVWDIR 459
S D T+KVW+ R
Sbjct: 399 SVDQTVKVWECR 410
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 240 (89.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 233 (87.1 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 79/272 (29%), Positives = 124/272 (45%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
LSGH VT V + V+ + S+D TIKVW+ G R LKGH V ++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYN----KIKGNAPERLVSGSDDFTMFLWEPA 347
L + + D T K + E ++ +N I N + +VS S D T+ +WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
KT TGH++ V V + DG +AS S D+++++W T + A R H
Sbjct: 223 TGYCVKT-FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE----- 276
Query: 408 IRFELIYCFRY-PSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQD 466
++ C + P + Y + + LLSGS+D T+K+WD+ T
Sbjct: 277 ---HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 333
Query: 467 LPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L GH + V V + G+ + S D+ L++W
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Score = 227 (85.0 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 195 (73.7 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 194 (73.4 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 57/189 (30%), Positives = 87/189 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T GH E V V + DG +AS S D TVR+W + T+ + H++ V CI+W+
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Query: 160 AD--------------------GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ G L+SGS+ ++ WD TG L GH W+ G+
Sbjct: 286 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGV 344
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGS 258
+ H + +S + D R+WD ++C+ L+ H VT + + + TGS
Sbjct: 345 LF---HSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 259 QDCTIKVWE 267
D T+KVWE
Sbjct: 400 VDQTVKVWE 408
Score = 167 (63.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 55/211 (26%), Positives = 97/211 (45%)
Query: 305 KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP-KTRMTGHQQLV 363
K+++S ++K +E +K+ A E SG + + + P K ++GH+ V
Sbjct: 53 KKWTSVIRLQKKVMELESKLN-EAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPV 111
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----LIYCFRY 418
V F P + SAS D +IK+W+ TG F +GH V I F+ L C
Sbjct: 112 TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD 171
Query: 419 PS-------NFYCVVDM---SCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP 468
+ F C+ M +S + + ++S S+D T+K+W+++T +
Sbjct: 172 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT 231
Query: 469 GHADEVFAVDWSPDGEKVASGGKDRVLKLWM 499
GH + V V + DG +AS D+ +++W+
Sbjct: 232 GHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Score = 151 (58.2 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
Score = 74 (31.1 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 32/132 (24%), Positives = 58/132 (43%)
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W P S + TG + + P G ++ S S DK+IK+W+ +TG + GH
Sbjct: 284 WAPESSYSSISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 404 PVYQIRFE-----LIYC--------FRYPSNFYCVVDMSC---CMSLYSWSADSRLLLSG 447
V + F ++ C + Y N C+ ++ ++ + + +++G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDY-KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Query: 448 SKDSTLKVWDIR 459
S D T+KVW+ R
Sbjct: 399 SVDQTVKVWECR 410
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 240 (89.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 233 (87.1 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 79/272 (29%), Positives = 124/272 (45%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
LSGH VT V + V+ + S+D TIKVW+ G R LKGH V ++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYN----KIKGNAPERLVSGSDDFTMFLWEPA 347
L + + D T K + E ++ +N I N + +VS S D T+ +WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
KT TGH++ V V + DG +AS S D+++++W T + A R H
Sbjct: 223 TGYCVKT-FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE----- 276
Query: 408 IRFELIYCFRY-PSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQD 466
++ C + P + Y + + LLSGS+D T+K+WD+ T
Sbjct: 277 ---HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 333
Query: 467 LPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L GH + V V + G+ + S D+ L++W
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Score = 227 (85.0 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 195 (73.7 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 194 (73.4 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 57/189 (30%), Positives = 87/189 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T GH E V V + DG +AS S D TVR+W + T+ + H++ V CI+W+
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Query: 160 AD--------------------GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ G L+SGS+ ++ WD TG L GH W+ G+
Sbjct: 286 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGV 344
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGS 258
+ H + +S + D R+WD ++C+ L+ H VT + + + TGS
Sbjct: 345 LF---HSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 259 QDCTIKVWE 267
D T+KVWE
Sbjct: 400 VDQTVKVWE 408
Score = 167 (63.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 55/211 (26%), Positives = 97/211 (45%)
Query: 305 KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP-KTRMTGHQQLV 363
K+++S ++K +E +K+ A E SG + + + P K ++GH+ V
Sbjct: 53 KKWTSVIRLQKKVMELESKLN-EAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPV 111
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----LIYCFRY 418
V F P + SAS D +IK+W+ TG F +GH V I F+ L C
Sbjct: 112 TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD 171
Query: 419 PS-------NFYCVVDM---SCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP 468
+ F C+ M +S + + ++S S+D T+K+W+++T +
Sbjct: 172 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT 231
Query: 469 GHADEVFAVDWSPDGEKVASGGKDRVLKLWM 499
GH + V V + DG +AS D+ +++W+
Sbjct: 232 GHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Score = 151 (58.2 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
Score = 74 (31.1 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 32/132 (24%), Positives = 58/132 (43%)
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W P S + TG + + P G ++ S S DK+IK+W+ +TG + GH
Sbjct: 284 WAPESSYSSISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 404 PVYQIRFE-----LIYC--------FRYPSNFYCVVDMSC---CMSLYSWSADSRLLLSG 447
V + F ++ C + Y N C+ ++ ++ + + +++G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDY-KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Query: 448 SKDSTLKVWDIR 459
S D T+KVW+ R
Sbjct: 399 SVDQTVKVWECR 410
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 237 (88.5 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 74/281 (26%), Positives = 125/281 (44%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T GH+ V +FSPD + L S S DTT RLW + T + + GH V +++S G
Sbjct: 674 TFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFG 733
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ + S + W P +GH + + P ++N + S D A
Sbjct: 734 FYFATASHDRTARLWTTNHISPL-RIFTGHLSDCNTVRFHP-NINY----LATGSNDKSA 787
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHG 281
R+W++ KCV GH + V + DG ++ T +D ++ +W+ + GK ++++ GH
Sbjct: 788 RLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHT 847
Query: 282 HWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFT 340
V SL S + + L +G+ D T + + ++KKA +N P L++
Sbjct: 848 KCVYSLDFSCDGSILASGSSDCTVRLW----DVKKA----FNSSLSTQPSSLINDESRKR 899
Query: 341 MFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
L S + Q V +V FS +AS +F+
Sbjct: 900 KTLKSKLFSDELLETYPTKQTPVYNVCFSRRNLLLASGAFN 940
Score = 180 (68.4 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 53/182 (29%), Positives = 86/182 (47%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L+S S+D T LW GH V V FSP G + A+AS D++ +LW
Sbjct: 694 LLSCSEDTTARLWSMETMSN-LVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTNH 752
Query: 392 GKFVAVFRGHVGPVYQIRFEL-IYCFRYPSNFYCV----VDMSCCMSLY----------S 436
+ +F GH+ +RF I SN + C+ ++ +
Sbjct: 753 ISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVA 812
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+S D RLL + +D+++ +WD+ T K + + GH V+++D+S DG +ASG D ++
Sbjct: 813 FSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVR 872
Query: 497 LW 498
LW
Sbjct: 873 LW 874
Score = 174 (66.3 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 63/261 (24%), Positives = 111/261 (42%)
Query: 257 GSQDCTIKVW---ETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEM 313
G D ++K+W E + +L ++ + + G F + SS M
Sbjct: 576 GFSDSSVKIWNLKEMKEQRLQQQQQQQQQQQQQQNSNQNGYFENGNFASSASSASSA--M 633
Query: 314 KKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQ 373
+ N A L SGS + L + + KT + GH V FSPD Q
Sbjct: 634 NGSGNNNENNKSTTANNNLNSGSSSSSNKLQKQQKESEFKTFL-GHSGPVYGCSFSPDSQ 692
Query: 374 WVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELI-YCFR----------YPSNF 422
++ S S D + +LW+ T + ++GH PV+ + F + F + +N
Sbjct: 693 YLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTNH 752
Query: 423 YCVV-----DMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAV 477
+ +S C ++ + + L +GS D + ++W+I+T K + GH ++ V
Sbjct: 753 ISPLRIFTGHLSDCNTV-RFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTV 811
Query: 478 DWSPDGEKVASGGKDRVLKLW 498
+SPDG +A+ G+D + LW
Sbjct: 812 AFSPDGRLLATAGEDTSVILW 832
Score = 165 (63.1 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 34/80 (42%), Positives = 45/80 (56%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C GH + +VAFSPDGR LA+ DT+V LWDL+T + K GH V + +
Sbjct: 796 KCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDF 855
Query: 159 SADGKHLVSGSKAGELQCWD 178
S DG L SGS ++ WD
Sbjct: 856 SCDGSILASGSSDCTVRLWD 875
Score = 152 (58.6 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 43/141 (30%), Positives = 63/141 (44%)
Query: 334 SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGK 393
+ S D T LW P TGH N V F P+ ++A+ S DKS +LW TGK
Sbjct: 738 TASHDRTARLWTTN-HISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGK 796
Query: 394 FVAVFRGHVGPVYQIRFE---LIYCFRYPSNFYCVVDMSC------------CMSLYSWS 438
V +F GH P+Y + F + + D+S C+ +S
Sbjct: 797 CVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFS 856
Query: 439 ADSRLLLSGSKDSTLKVWDIR 459
D +L SGS D T+++WD++
Sbjct: 857 CDGSILASGSSDCTVRLWDVK 877
Score = 144 (55.7 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 57/232 (24%), Positives = 102/232 (43%)
Query: 123 LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTG 182
L SGS ++ +L ++ GH V ++S D ++L+S S+ + W +T
Sbjct: 652 LNSGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMET- 710
Query: 183 KPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLA 242
+ GH + +S+ P F +AS D AR+W + + +GH
Sbjct: 711 MSNLVCYKGHNFPVWDVSFSPFGFY-----FATASHDRTARLWTTNHISPLRIFTGHLSD 765
Query: 243 VTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFD 301
V++ + + TGS D + ++WE GK +R GH + ++A S + L A +
Sbjct: 766 CNTVRFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGE 825
Query: 302 HTGK---QYSSPEEMKKAALERYNKIKGNAP-----ERLVSGSDDFTMFLWE 345
T S+ +++KK ++ + K + L SGS D T+ LW+
Sbjct: 826 DTSVILWDLSTGKKVKK--MDGHTKCVYSLDFSCDGSILASGSSDCTVRLWD 875
Score = 58 (25.5 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 29/125 (23%), Positives = 55/125 (44%)
Query: 15 LTDPEGNPLGAPMYFPQNAGPQQLSQIVNKLLNNEEKLPYAF--YISDHELLVPLGSYLE 72
LTDP PL P+ P P S + KL ++K +S E VP+ + E
Sbjct: 469 LTDPNA-PL-PPVVAPPPP-PPPTSGYIPKLKKKDKKKKEVKDERMSKIESNVPIPNLTE 525
Query: 73 KHKVSVEKVLSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTV 132
+ + +++ + ++ + C TI + + + S D + +A G D++V
Sbjct: 526 RFE---NELMEDFTKCVSLSSSHLPSICFYTIFNTYQGLNTTDISKDAQLVAGGFSDSSV 582
Query: 133 RLWDL 137
++W+L
Sbjct: 583 KIWNL 587
>UNIPROTKB|I3LSG8 [details] [associations]
symbol:I3LSG8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00931 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GeneTree:ENSGT00700000104017 ProteinModelPortal:I3LSG8
Ensembl:ENSSSCT00000028858 OMA:LRERVAC Uniprot:I3LSG8
Length = 994
Score = 177 (67.4 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 45/190 (23%), Positives = 92/190 (48%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
N + HT+AV FS DG+++AS D T++++ T + + H++ VLC A
Sbjct: 341 NLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCA 400
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+SAD + + + S +++ W+ TG+ + H + + + N+ + S
Sbjct: 401 FSADDRFIATCSVDKKVKIWNSVTGELVQS-YDEHSEQVNCCHFTN---NSNHLLLATGS 456
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRE 276
D ++WD++ ++C + GHT +V+ ++ D + S D T+K+W+ +
Sbjct: 457 SDYFLKLWDLNQKECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDVKSANERKS 516
Query: 277 LKGHGHWVNS 286
+ ++NS
Sbjct: 517 INVKQFFLNS 526
Score = 163 (62.4 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 68/254 (26%), Positives = 115/254 (45%)
Query: 239 HTLAV--TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-L 295
HT AV C G + G+ D T++V++ G+ + E+K H V A S + +
Sbjct: 350 HTDAVYHACFSEDGQRIASCGA-DKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADDRFI 408
Query: 296 RTGAFDHTGKQYSSPE-EMKKAALERYNKIK-----GNAPERLVS-GSDDFTMFLWEPAV 348
T + D K ++S E+ ++ E ++ N+ L++ GS D+ + LW+
Sbjct: 409 ATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKLWD-LN 467
Query: 349 SKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
K+ + M GH V+H FSPD + +AS S D ++KLW+ + I
Sbjct: 468 QKECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDVKSAN----------ERKSI 517
Query: 409 RFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDL- 467
+ + S V + CC SWSAD L+ +K+ L +++I T L ++
Sbjct: 518 NVKQFFLNSEESQEDMEVMVKCC----SWSADGASLVVAAKNKVL-LFNIHTGGLLAEIH 572
Query: 468 PGHADEVFAVDWSP 481
GH + D+SP
Sbjct: 573 TGHHSTIQYCDFSP 586
Score = 154 (59.3 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 41/135 (30%), Positives = 64/135 (47%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLV 166
H + VLS SPD + +S S D T ++W + +P+ + GHK V C A+S D L
Sbjct: 829 HQDTVLSCDISPDATKFSSTSADKTAKIWSFDLLSPLHELRGHKGCVRCSAFSVDSTLLA 888
Query: 167 SGSKAGELQCWDPQTGK--PSGNPL---SG---HKKWITGISWEPVHLNAPCRRFVSASK 218
+G GE++ W+ G+ S P+ G H W+T + + P + VSA
Sbjct: 889 TGDDNGEIRIWNVSNGELLHSCAPVLVEGGAATHGGWVTDLRFSP-----DGKMLVSAG- 942
Query: 219 DGDARIWDVSLRKCV 233
G + W+V K +
Sbjct: 943 -GYLKWWNVDSGKSI 956
Score = 152 (58.6 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 49/205 (23%), Positives = 88/205 (42%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
NR + H V + F+ DG+ + S S D+ +++W+ ++ + H+ V
Sbjct: 738 NRLFQSRTRHKNTVRHIQFTTDGKNVISSSDDSAIQVWNWQSEETV-SLQAHQETVKDFR 796
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+ + L+S S G ++ W+ TG+ + + H+ + P +F S S
Sbjct: 797 LLKNSR-LLSWSFDGTVKVWNIITGRIEKDFVC-HQDTVLSCDISP-----DATKFSSTS 849
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRE 276
D A+IW L + L GH V C + D + TG + I++W + G+L+
Sbjct: 850 ADKTAKIWSFDLLSPLHELRGHKGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHS 909
Query: 277 -----LKG----HGHWVNSLALSTE 292
++G HG WV L S +
Sbjct: 910 CAPVLVEGGAATHGGWVTDLRFSPD 934
Score = 124 (48.7 bits), Expect = 4.3e-12, Sum P(3) = 4.3e-12
Identities = 46/160 (28%), Positives = 65/160 (40%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT-------QTPMFKCTGHKN- 151
C T+ GHT +V FSPD + LAS S D T++LWD+ + F ++
Sbjct: 471 CRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLNSEESQ 530
Query: 152 -----WVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV-H 205
V C +WSADG LV +K ++ ++ TG +GH I + P H
Sbjct: 531 EDMEVMVKCCSWSADGASLVVAAK-NKVLLFNIHTGGLLAEIHTGHHSTIQYCDFSPSNH 589
Query: 206 LNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTC 245
L K G IW + + S H V C
Sbjct: 590 LAVVALSQYCVEKRGKF-IWLPGSLERKLDYSKHFFTVLC 628
Score = 122 (48.0 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 440 DSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+SRLL S S D T+KVW+I T ++++D H D V + D SPD K +S D+ K+W
Sbjct: 800 NSRLL-SWSFDGTVKVWNIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIW 857
Score = 109 (43.4 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 58/240 (24%), Positives = 98/240 (40%)
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETT 269
+R S D +++ + ++ + H V C + D I T S D +K+W +
Sbjct: 364 QRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADDRFIATCSVDKKVKIWNSV 423
Query: 270 QGKLIRELKGHGHWVNSLAL---STEYALRTGAFDHTGKQYS-SPEEMKKAALERYNKIK 325
G+L++ H VN S L TG+ D+ K + + +E + N +
Sbjct: 424 TGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKLWDLNQKECRNTMFGHTNSVS 483
Query: 326 GN--APER--LVSGSDDFTMFLWEPAVSKQPKT--------RMTGHQQ----LVNHVYFS 369
+P+ L S S D T+ LW+ + + K+ Q+ +V +S
Sbjct: 484 HCRFSPDDKLLASCSADGTLKLWDVKSANERKSINVKQFFLNSEESQEDMEVMVKCCSWS 543
Query: 370 PDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMS 429
DG + A+ +K + L+N TG +A H G I+ YC PSN VV +S
Sbjct: 544 ADGASLVVAAKNK-VLLFNIHTGGLLAEI--HTGHHSTIQ----YCDFSPSNHLAVVALS 596
Score = 97 (39.2 bits), Expect = 4.3e-12, Sum P(3) = 4.3e-12
Identities = 40/167 (23%), Positives = 69/167 (41%)
Query: 243 VTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDH 302
V+C++ + + ++KV E +L + H + V + +T+ + D
Sbjct: 710 VSCIQGTSECFVLGDVYGHSLKVLELLNNRLFQSRTRHKNTVRHIQFTTDGKNVISSSDD 769
Query: 303 TGKQ---YSSPEEMK-KAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTG 358
+ Q + S E + +A E + RL+S S D T+ +W + K +
Sbjct: 770 SAIQVWNWQSEETVSLQAHQETVKDFRLLKNSRLLSWSFDGTVKVWNIITGRIEKDFVC- 828
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
HQ V SPD +S S DK+ K+W+ + RGH G V
Sbjct: 829 HQDTVLSCDISPDATKFSSTSADKTAKIWSFDLLSPLHELRGHKGCV 875
Score = 72 (30.4 bits), Expect = 4.3e-12, Sum P(3) = 4.3e-12
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQD-----LPG----HADEVFAVDWSP 481
C+ ++S DS LL +G + +++W++ +L + G H V + +SP
Sbjct: 874 CVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHSCAPVLVEGGAATHGGWVTDLRFSP 933
Query: 482 DGEKVASGGKDRVLKLW 498
DG+ + S G LK W
Sbjct: 934 DGKMLVSAGG--YLKWW 948
Score = 67 (28.6 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 17/74 (22%), Positives = 35/74 (47%)
Query: 425 VVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGE 484
+ D S +S +++ +L +LKV ++ +L Q H + V + ++ DG+
Sbjct: 703 IPDQSFMVSCIQGTSEC-FVLGDVYGHSLKVLELLNNRLFQSRTRHKNTVRHIQFTTDGK 761
Query: 485 KVASGGKDRVLKLW 498
V S D +++W
Sbjct: 762 NVISSSDDSAIQVW 775
Score = 54 (24.1 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 15/63 (23%), Positives = 33/63 (52%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSP-DGEKVASGGKDRVL 495
++ D + ++S S DS ++VW+ ++++ L H + V D+ ++ S D +
Sbjct: 756 FTTDGKNVISSSDDSAIQVWNWQSEETVS-LQAHQETV--KDFRLLKNSRLLSWSFDGTV 812
Query: 496 KLW 498
K+W
Sbjct: 813 KVW 815
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 246 (91.7 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 82/291 (28%), Positives = 130/291 (44%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWD---LNTQTPMFKCTGHKNWVLCIAWSADGKHLVS 167
+ ++A++P+GR+L +G+ LW+ N +T + H V + WS + +V+
Sbjct: 149 IFTLAWTPEGRRLVTGASSGEFTLWNGLTFNFETIL---QAHDISVRTMVWSHNDSWMVT 205
Query: 168 GSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDV 227
G G ++ W Q+ + HK+ I GIS+ P +FVS S DG RIWD
Sbjct: 206 GDHGGYVKYW--QSNMNNVKMYQAHKEAIRGISFSPTD-----SKFVSGSDDGTLRIWDF 258
Query: 228 SLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCT--IKVWETTQGKLIRELKGHGHWV 284
+ L GH V CV W G+I +GS+D IK+W+ G + L H V
Sbjct: 259 MRCQEERVLRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTV 318
Query: 285 NSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA----P--ERLV-SGS 336
L + L T + DH K + ++ + R +K + ++ P E L SG
Sbjct: 319 MDLKWNDNGNWLVTASRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGG 378
Query: 337 DDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
D ++ W K+ T H +V + + P G + S S D +IK W
Sbjct: 379 SDGSILFWNVGTDKEIGCVETAHDSIVWTLAWHPLGHILCSGSNDHTIKFW 429
Score = 207 (77.9 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 65/225 (28%), Positives = 106/225 (47%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLV 166
H EA+ ++FSP + SGS D T+R+WD GH V C+ W +V
Sbjct: 228 HKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQEERVLRGHGADVKCVHWHPQKGMIV 287
Query: 167 SGSKAGE--LQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
SGSK + ++ WDP++G L HK + + W N V+AS+D ++
Sbjct: 288 SGSKDNQQPIKIWDPKSGIALAT-LHAHKSTVMDLKW-----NDNGNWLVTASRDHLLKL 341
Query: 225 WDV-SLRKCVICLSGHTLAVTCVKWGG--DGVIYTGSQDCTIKVWETTQGKLIRELK-GH 280
+D+ +LR+ V GH + V W +G+ +G D +I W K I ++ H
Sbjct: 342 FDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSILFWNVGTDKEIGCVETAH 401
Query: 281 GHWVNSLALST-EYALRTGAFDHTGKQYSS--PEEMKKAALERYN 322
V +LA + L +G+ DHT K ++ P ++ + ++YN
Sbjct: 402 DSIVWTLAWHPLGHILCSGSNDHTIKFWTRNRPGDLMR---DKYN 443
Score = 205 (77.2 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 55/191 (28%), Positives = 88/191 (46%)
Query: 93 RIRPVNRCSA--TIAGHTEAVLSVAFSPDGRQLASGSGDTT--VRLWDLNTQTPMFKCTG 148
RI RC + GH V V + P + SGS D +++WD + +
Sbjct: 254 RIWDFMRCQEERVLRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLHA 313
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA 208
HK+ V+ + W+ +G LV+ S+ L+ +D + + GHKK + +SW P+H
Sbjct: 314 HKSTVMDLKWNDNGNWLVTASRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGL 373
Query: 209 PCRRFVSASKDGDARIWDVSLRKCVICL-SGHTLAVTCVKWGGDG-VIYTGSQDCTIKVW 266
C S DG W+V K + C+ + H V + W G ++ +GS D TIK W
Sbjct: 374 FC----SGGSDGSILFWNVGTDKEIGCVETAHDSIVWTLAWHPLGHILCSGSNDHTIKFW 429
Query: 267 ETTQ-GKLIRE 276
+ G L+R+
Sbjct: 430 TRNRPGDLMRD 440
Score = 135 (52.6 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 46/201 (22%), Positives = 90/201 (44%)
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG-GDGVIYTGSQDCTIKVWETT 269
RR V+ + G+ +W+ L H ++V + W D + TG +K W++
Sbjct: 159 RRLVTGASSGEFTLWNGLTFNFETILQAHDISVRTMVWSHNDSWMVTGDHGGYVKYWQSN 218
Query: 270 QGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALERYN---KIK 325
++ + H + ++ S T+ +G+ D T + + ++ L + K
Sbjct: 219 MNN-VKMYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQEERVLRGHGADVKCV 277
Query: 326 GNAPER--LVSGSDDFT--MFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
P++ +VSGS D + +W+P T + H+ V + ++ +G W+ +AS D
Sbjct: 278 HWHPQKGMIVSGSKDNQQPIKIWDPKSGIALAT-LHAHKSTVMDLKWNDNGNWLVTASRD 336
Query: 382 KSIKLWN-GTTGKFVAVFRGH 401
+KL++ + V VFRGH
Sbjct: 337 HLLKLFDIRNLREEVQVFRGH 357
Score = 106 (42.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 44/173 (25%), Positives = 73/173 (42%)
Query: 248 WGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHTG- 304
W +G + TG+ +W L+ H V ++ S + + TG DH G
Sbjct: 154 WTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDISVRTMVWSHNDSWMVTG--DHGGY 211
Query: 305 -KQYSSPEEMKKAALERYNKIKGNA--P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGH 359
K + S K I+G + P + VSGSDD T+ +W+ + Q + + GH
Sbjct: 212 VKYWQSNMNNVKMYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWD-FMRCQEERVLRGH 270
Query: 360 QQLVNHVYFSPDGQWVASASFDKS--IKLWNGTTGKFVAVFRGHVGPVYQIRF 410
V V++ P + S S D IK+W+ +G +A H V +++
Sbjct: 271 GADVKCVHWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDLKW 323
Score = 98 (39.6 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 429 SCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLK-QDLPGHADEVFAVDWSPDGEKV- 486
S M L W+ + L++ S+D LK++DIR + + Q GH E +V W P E +
Sbjct: 316 STVMDL-KWNDNGNWLVTASRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLF 374
Query: 487 ASGGKDRVLKLW 498
SGG D + W
Sbjct: 375 CSGGSDGSILFW 386
Score = 83 (34.3 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 20/68 (29%), Positives = 29/68 (42%)
Query: 433 SLYSWSA-DSRLLLSGSKDSTLKVWDIRTQK-LKQDLPGHADEVFAVDWSPDGEKVASGG 490
S SW L SG D ++ W++ T K + H V+ + W P G + SG
Sbjct: 362 SSVSWHPIHEGLFCSGGSDGSILFWNVGTDKEIGCVETAHDSIVWTLAWHPLGHILCSGS 421
Query: 491 KDRVLKLW 498
D +K W
Sbjct: 422 NDHTIKFW 429
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 239 (89.2 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 61/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS S+ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSASRDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 233 (87.1 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 79/272 (29%), Positives = 124/272 (45%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
LSGH VT V + V+ + S+D TIKVW+ G R LKGH V ++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGK 163
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYN----KIKGNAPERLVSGSDDFTMFLWEPA 347
L + + D T K + E ++ +N I N + +VS S D T+ +WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-DHIVSASRDKTIKMWEVQ 222
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
KT TGH++ V V + DG +AS S D+++++W T + A R H
Sbjct: 223 TGYCVKT-FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE----- 276
Query: 408 IRFELIYCFRY-PSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQD 466
++ C + P + Y + + LLSGS+D T+K+WD+ T
Sbjct: 277 ---HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 333
Query: 467 LPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L GH + V V + G+ + S D+ L++W
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Score = 227 (85.0 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 66/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S S D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 194 (73.4 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
Identities = 56/190 (29%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSAS+D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSASRDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 194 (73.4 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 57/189 (30%), Positives = 87/189 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T GH E V V + DG +AS S D TVR+W + T+ + H++ V CI+W+
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Query: 160 AD--------------------GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ G L+SGS+ ++ WD TG L GH W+ G+
Sbjct: 286 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGV 344
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGS 258
+ H + +S + D R+WD ++C+ L+ H VT + + + TGS
Sbjct: 345 LF---HSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 259 QDCTIKVWE 267
D T+KVWE
Sbjct: 400 VDQTVKVWE 408
Score = 166 (63.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 55/211 (26%), Positives = 97/211 (45%)
Query: 305 KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP-KTRMTGHQQLV 363
K+++S ++K +E +K+ A E SG + + + P K ++GH+ V
Sbjct: 53 KKWTSVIRLQKKVMELESKLN-EAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPV 111
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----LIYCFRY 418
V F P + SAS D +IK+W+ TG F +GH V I F+ L C
Sbjct: 112 TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSAD 171
Query: 419 PS-------NFYCVVDM---SCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP 468
+ F C+ M +S + + ++S S+D T+K+W+++T +
Sbjct: 172 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT 231
Query: 469 GHADEVFAVDWSPDGEKVASGGKDRVLKLWM 499
GH + V V + DG +AS D+ +++W+
Sbjct: 232 GHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Score = 151 (58.2 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 46/184 (25%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVEDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + S+D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SASRDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
Score = 74 (31.1 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
Identities = 32/132 (24%), Positives = 58/132 (43%)
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W P S + TG + + P G ++ S S DK+IK+W+ +TG + GH
Sbjct: 284 WAPESSYSSISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 404 PVYQIRFE-----LIYC--------FRYPSNFYCVVDMSC---CMSLYSWSADSRLLLSG 447
V + F ++ C + Y N C+ ++ ++ + + +++G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDY-KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Query: 448 SKDSTLKVWDIR 459
S D T+KVW+ R
Sbjct: 399 SVDQTVKVWECR 410
>UNIPROTKB|E1BM03 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD CTD:10885
EMBL:DAAA02007388 IPI:IPI00694068 RefSeq:NP_001179317.1
UniGene:Bt.25958 ProteinModelPortal:E1BM03 PRIDE:E1BM03
Ensembl:ENSBTAT00000026561 GeneID:514870 KEGG:bta:514870
NextBio:20871548 Uniprot:E1BM03
Length = 943
Score = 176 (67.0 bits), Expect = 1.8e-17, Sum P(3) = 1.8e-17
Identities = 60/203 (29%), Positives = 93/203 (45%)
Query: 132 VRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGN-PLS 190
V +WDL + G K+ V C+ S DG HL G + G ++ + +G+ GN +
Sbjct: 47 VFIWDLRKGEKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGE--GNVTFN 104
Query: 191 GHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG 250
GHK IT + ++ L R S SKD D +WDV + L GH A+T +
Sbjct: 105 GHKAAITSLKYD--QLGG---RLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLR 159
Query: 251 D-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGKQY- 307
+ ++ T +D +K W+ + + GH V L L S E L TGA D + +
Sbjct: 160 EKNLLVTSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLVSEEKRLITGASDSELRAWD 219
Query: 308 -SSPEEMKKAALERYNKIKGNAP 329
S +E++ KIK ++P
Sbjct: 220 ISYLQEIEDPEEPEPKKIKESSP 242
Score = 167 (63.8 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 75/311 (24%), Positives = 132/311 (42%)
Query: 95 RPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC--TGHKNW 152
+PV TI GH V +++FS D + S + D+ +++W+ +T +C T +
Sbjct: 402 QPVRTNRITIGGHRSDVRTLSFSSDNIAILSAAADS-IKIWNRST----LQCIRTMACEY 456
Query: 153 VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRR 212
LC + + +V G+K G+LQ +D +G + H + +S P
Sbjct: 457 ALCSFFVPGDRQVVIGTKTGKLQLYDLASGNLL-ETIDAHDGALWSLSLSPDQRGFVTGG 515
Query: 213 FVSASKDGDARIW--DVSLRKCVICLSGHTLA----VTCVKWGGDGVIYTGSQ-DCTIKV 265
+ K D + + S +K + TL V CV + + + S DCT+K+
Sbjct: 516 ADKSVKFWDFELVKDENSTQKRLSVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKI 575
Query: 266 WETTQGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSP-EEMKKAALERYNK 323
+ K L GH V + +S + AL TG+ D K + + K+ +
Sbjct: 576 FYVDTLKFFLSLYGHKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDS 635
Query: 324 IK--GNAPER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+ P+ + D + W+ + +T + GH Q + + SP G +V S+S
Sbjct: 636 VMYLRFVPKSHLFFTAGKDRKIKQWDADKFEHIQT-LEGHHQEIWCLAVSPSGDYVVSSS 694
Query: 380 FDKSIKLWNGT 390
DKS++LW T
Sbjct: 695 HDKSLRLWERT 705
Score = 161 (61.7 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 51/171 (29%), Positives = 81/171 (47%)
Query: 109 EAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSG 168
E VL V++SP+ + LA D TV+++ ++T GHK V+C+ S DG + +G
Sbjct: 550 EEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISYDGALIATG 609
Query: 169 SKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV-HLNAPCRRFVSASKDGDARIWDV 227
S ++ W G L H + + + P HL F +A KD + WD
Sbjct: 610 SADRNVKIWGLDFGD-CHKSLFAHDDSVMYLRFVPKSHL------FFTAGKDRKIKQWDA 662
Query: 228 SLRKCVICLSGHTLAVTC--VKWGGDGVIYTGSQDCTIKVWETTQGKLIRE 276
+ + L GH + C V GD V+ + S D ++++WE T+ LI E
Sbjct: 663 DKFEHIQTLEGHHQEIWCLAVSPSGDYVV-SSSHDKSLRLWERTREPLILE 712
Score = 148 (57.2 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 34/128 (26%), Positives = 66/128 (51%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
+ T GH A+ S+ + G +LASGS DT + +WD+ ++ +++ GHK+ + +
Sbjct: 100 NVTFNGHKAAITSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLR 159
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+ LV+ K ++ WD T + + GH+ + G+ L + +R ++ + D
Sbjct: 160 EKNLLVTSGKDTMVKWWDLDT-QHCFKTMVGHRTEVWGLV-----LVSEEKRLITGASDS 213
Query: 221 DARIWDVS 228
+ R WD+S
Sbjct: 214 ELRAWDIS 221
Score = 139 (54.0 bits), Expect = 2.1e-13, Sum P(3) = 2.1e-13
Identities = 46/166 (27%), Positives = 72/166 (43%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ G V + SPDG LA G D ++R++ L + GHK + + + G
Sbjct: 61 LQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAITSLKYDQLGG 120
Query: 164 HLVSGSKAGELQCWDPQTGKPSG-NPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
L SGSK ++ WD SG L GHK IT + + L V++ KD
Sbjct: 121 RLASGSKDTDIIVWD--VINESGLYRLKGHKDAIT----QALFLREK-NLLVTSGKDTMV 173
Query: 223 RIWDVSLRKCVICLSGHTLAVT-CVKWGGDGVIYTGSQDCTIKVWE 267
+ WD+ + C + GH V V + + TG+ D ++ W+
Sbjct: 174 KWWDLDTQHCFKTMVGHRTEVWGLVLVSEEKRLITGASDSELRAWD 219
Score = 116 (45.9 bits), Expect = 7.0e-17, Sum P(2) = 7.0e-17
Identities = 46/164 (28%), Positives = 72/164 (43%)
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVY--Q 407
KQ +T + L V +SP+ + +A + D ++K++ T KF GH PV
Sbjct: 541 KQTRTLQLDEEVLC--VSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMD 598
Query: 408 IRFE--LIYCFRYPSNFYCV-VDMSCC-MSLYS---------WSADSRLLLSGSKDSTLK 454
I ++ LI N +D C SL++ + S L + KD +K
Sbjct: 599 ISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLRFVPKSHLFFTAGKDRKIK 658
Query: 455 VWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
WD + Q L GH E++ + SP G+ V S D+ L+LW
Sbjct: 659 QWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLW 702
Score = 101 (40.6 bits), Expect = 1.8e-17, Sum P(3) = 1.8e-17
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 420 SNFYCVVDMSCCMSLYSWSADS-RLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 478
S C+ M+C +L S+ R ++ G+K L+++D+ + L + + H ++++
Sbjct: 444 STLQCIRTMACEYALCSFFVPGDRQVVIGTKTGKLQLYDLASGNLLETIDAHDGALWSLS 503
Query: 479 WSPDGEKVASGGKDRVLKLW 498
SPD +GG D+ +K W
Sbjct: 504 LSPDQRGFVTGGADKSVKFW 523
Score = 74 (31.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 43/185 (23%), Positives = 75/185 (40%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQ 270
R+V+ IWD+ + ++ L G VTC+ DG+ + G +D +I+++
Sbjct: 37 RYVAVPACEHVFIWDLRKGEKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLS 96
Query: 271 GKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA- 328
G+ GH + SL L +G+ D + E L+ + A
Sbjct: 97 GEGNVTFNGHKAAITSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQAL 156
Query: 329 --PER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV-NHVYFSPDGQWVASASFDKS 383
E+ LV+ D TM W ++ M GH+ V V S + + + AS D
Sbjct: 157 FLREKNLLVTSGKD-TMVKWWDLDTQHCFKTMVGHRTEVWGLVLVSEEKRLITGAS-DSE 214
Query: 384 IKLWN 388
++ W+
Sbjct: 215 LRAWD 219
Score = 68 (29.0 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLN 138
C T+ GH V + + ++L +G+ D+ +R WD++
Sbjct: 183 CFKTMVGHRTEVWGLVLVSEEKRLITGASDSELRAWDIS 221
Score = 64 (27.6 bits), Expect = 1.8e-17, Sum P(3) = 1.8e-17
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 351 QP-KT-RMT--GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
QP +T R+T GH+ V + FS D + SA+ D SIK+WN +T
Sbjct: 402 QPVRTNRITIGGHRSDVRTLSFSSDNIAILSAAAD-SIKIWNRST 445
Score = 50 (22.7 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 458 IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+RT ++ + GH +V + +S D + S D + K+W
Sbjct: 404 VRTNRIT--IGGHRSDVRTLSFSSDNIAILSAAADSI-KIW 441
Score = 47 (21.6 bits), Expect = 9.9e-10, Sum P(2) = 9.9e-10
Identities = 29/123 (23%), Positives = 56/123 (45%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF----ELI 413
GH+ V + S DG +A+ S D+++K+W G H V +RF L
Sbjct: 589 GHKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLRFVPKSHLF 648
Query: 414 YCF-------RYPSN-FYCVVDMS------CCMSLYSWSADSRLLLSGSKDSTLKVWDIR 459
+ ++ ++ F + + C+++ S S D ++S S D +L++W+ R
Sbjct: 649 FTAGKDRKIKQWDADKFEHIQTLEGHHQEIWCLAV-SPSGD--YVVSSSHDKSLRLWE-R 704
Query: 460 TQK 462
T++
Sbjct: 705 TRE 707
Score = 37 (18.1 bits), Expect = 5.8e-11, Sum P(3) = 5.8e-11
Identities = 14/51 (27%), Positives = 28/51 (54%)
Query: 449 KDSTLKVWDIR-TQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
++ST K ++ T+ L+ D +EV V +SP+ + +A D +K++
Sbjct: 531 ENSTQKRLSVKQTRTLQLD-----EEVLCVSYSPNQKLLAVSLLDCTVKIF 576
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 226 (84.6 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 69/302 (22%), Positives = 131/302 (43%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
R T+ GH + ++ + D R L S S D + +WD T + +WV+ A+
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 105
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPS---GNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ G + G + +T + + L GH +++ + L+ + ++
Sbjct: 106 APSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF----LDD--NQIIT 159
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLI 274
+S D +WD+ + + +GH+ V + DG + +G+ D +IK+W+
Sbjct: 160 SSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCR 219
Query: 275 RELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG------- 326
+ GH +N++A YA TG+ D T + + + + N I G
Sbjct: 220 QTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFS 279
Query: 327 NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
+ L++G DDF +W+ A+ + GH V+ + + DG VA+ S+D +K+
Sbjct: 280 RSGRLLLAGYDDFNCNIWD-AMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI 338
Query: 387 WN 388
WN
Sbjct: 339 WN 340
Score = 177 (67.4 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 69/269 (25%), Positives = 114/269 (42%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT-GKPSGNPLSGHKKWITGISWEPVHL 206
GH + + W D + LVS S+ G+L WD T K PL W+ ++
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAY----- 105
Query: 207 NAPCRRFVSASK-DGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGVIYTGSQDC 261
AP FV+ D I+ + R+ + +S GHT ++C ++ D I T S D
Sbjct: 106 -APSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDT 164
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEM-KKAALE 319
T +W+ G+ GH V SL+L+ + +GA D + K + + M ++ +
Sbjct: 165 TCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIG 224
Query: 320 RYNKIKGNA--PE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV---NHVYFSPDG 372
+ I A P +GSDD T L++ ++ M H ++ V FS G
Sbjct: 225 HESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQE--LLMYSHDNIICGITSVAFSRSG 282
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGH 401
+ + + D + +W+ G V GH
Sbjct: 283 RLLLAGYDDFNCNIWDAMKGDRAGVLAGH 311
Score = 136 (52.9 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 52/223 (23%), Positives = 88/223 (39%)
Query: 236 LSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-Y 293
L GH + + WG D ++ + SQD + +W++ + + WV + A +
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 294 ALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA----------PERLVSGSDDFTMFL 343
+ G D+ YS + R ++ G+ ++++ S D T L
Sbjct: 111 FVACGGLDNICSIYSLKTREGNVRVSR--ELPGHTGYLSCCRFLDDNQIITSSGDTTCAL 168
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W+ +Q GH V + +PDG+ S + D SIKLW+ F GH
Sbjct: 169 WDIETGQQT-VGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHES 227
Query: 404 PVYQIRF-ELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLL 445
+ + F Y F S+ D +C L+ AD LL+
Sbjct: 228 DINAVAFFPNGYAFTTGSD-----DATC--RLFDLRADQELLM 263
Score = 118 (46.6 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 428 MSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 487
+SCC L D +++ S D+T +WDI T + GH+ +V ++ +PDG
Sbjct: 146 LSCCRFL-----DDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFV 200
Query: 488 SGGKDRVLKLW 498
SG D +KLW
Sbjct: 201 SGACDASIKLW 211
Score = 113 (44.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 432 MSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGK 491
MSL S + D R +SG+ D+++K+WD+R +Q GH ++ AV + P+G +G
Sbjct: 188 MSL-SLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSD 246
Query: 492 DRVLKLW 498
D +L+
Sbjct: 247 DATCRLF 253
Score = 102 (41.0 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 23/69 (33%), Positives = 34/69 (49%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
C ++ ++S RLLL+G D +WD L GH + V + + DG VA+G
Sbjct: 271 CGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 490 GKDRVLKLW 498
D LK+W
Sbjct: 331 SWDSFLKIW 339
Score = 69 (29.3 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 25/95 (26%), Positives = 44/95 (46%)
Query: 308 SSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFL--WEPAVSKQPKTRMT--GHQQLV 363
S E++++ A + N+I+ R G T +P Q +TR T GH +
Sbjct: 2 SELEQLRQEAEQLRNQIRD---ARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKI 58
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNG-TTGKFVAV 397
+++ D + + SAS D + +W+ TT K A+
Sbjct: 59 YAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAI 93
Score = 44 (20.5 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 440 DSRLLLSGSKDSTLKVWD 457
D + +GS DS LK+W+
Sbjct: 323 DGMAVATGSWDSFLKIWN 340
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 226 (84.6 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 69/302 (22%), Positives = 131/302 (43%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
R T+ GH + ++ + D R L S S D + +WD T + +WV+ A+
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 105
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPS---GNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ G + G + +T + + L GH +++ + L+ + ++
Sbjct: 106 APSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF----LDD--NQIIT 159
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLI 274
+S D +WD+ + + +GH+ V + DG + +G+ D +IK+W+
Sbjct: 160 SSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCR 219
Query: 275 RELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG------- 326
+ GH +N++A YA TG+ D T + + + + N I G
Sbjct: 220 QTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFS 279
Query: 327 NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
+ L++G DDF +W+ A+ + GH V+ + + DG VA+ S+D +K+
Sbjct: 280 RSGRLLLAGYDDFNCNIWD-AMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI 338
Query: 387 WN 388
WN
Sbjct: 339 WN 340
Score = 177 (67.4 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 69/269 (25%), Positives = 114/269 (42%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT-GKPSGNPLSGHKKWITGISWEPVHL 206
GH + + W D + LVS S+ G+L WD T K PL W+ ++
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAY----- 105
Query: 207 NAPCRRFVSASK-DGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGVIYTGSQDC 261
AP FV+ D I+ + R+ + +S GHT ++C ++ D I T S D
Sbjct: 106 -APSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDT 164
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEM-KKAALE 319
T +W+ G+ GH V SL+L+ + +GA D + K + + M ++ +
Sbjct: 165 TCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIG 224
Query: 320 RYNKIKGNA--PE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV---NHVYFSPDG 372
+ I A P +GSDD T L++ ++ M H ++ V FS G
Sbjct: 225 HESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQE--LLMYSHDNIICGITSVAFSRSG 282
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGH 401
+ + + D + +W+ G V GH
Sbjct: 283 RLLLAGYDDFNCNIWDAMKGDRAGVLAGH 311
Score = 136 (52.9 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 52/223 (23%), Positives = 88/223 (39%)
Query: 236 LSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-Y 293
L GH + + WG D ++ + SQD + +W++ + + WV + A +
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 294 ALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA----------PERLVSGSDDFTMFL 343
+ G D+ YS + R ++ G+ ++++ S D T L
Sbjct: 111 FVACGGLDNICSIYSLKTREGNVRVSR--ELPGHTGYLSCCRFLDDNQIITSSGDTTCAL 168
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W+ +Q GH V + +PDG+ S + D SIKLW+ F GH
Sbjct: 169 WDIETGQQT-VGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHES 227
Query: 404 PVYQIRF-ELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLL 445
+ + F Y F S+ D +C L+ AD LL+
Sbjct: 228 DINAVAFFPNGYAFTTGSD-----DATC--RLFDLRADQELLM 263
Score = 118 (46.6 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 428 MSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 487
+SCC L D +++ S D+T +WDI T + GH+ +V ++ +PDG
Sbjct: 146 LSCCRFL-----DDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFV 200
Query: 488 SGGKDRVLKLW 498
SG D +KLW
Sbjct: 201 SGACDASIKLW 211
Score = 113 (44.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 432 MSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGK 491
MSL S + D R +SG+ D+++K+WD+R +Q GH ++ AV + P+G +G
Sbjct: 188 MSL-SLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSD 246
Query: 492 DRVLKLW 498
D +L+
Sbjct: 247 DATCRLF 253
Score = 102 (41.0 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 23/69 (33%), Positives = 34/69 (49%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
C ++ ++S RLLL+G D +WD L GH + V + + DG VA+G
Sbjct: 271 CGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 490 GKDRVLKLW 498
D LK+W
Sbjct: 331 SWDSFLKIW 339
Score = 69 (29.3 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 25/95 (26%), Positives = 44/95 (46%)
Query: 308 SSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFL--WEPAVSKQPKTRMT--GHQQLV 363
S E++++ A + N+I+ R G T +P Q +TR T GH +
Sbjct: 2 SELEQLRQEAEQLRNQIRD---ARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKI 58
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNG-TTGKFVAV 397
+++ D + + SAS D + +W+ TT K A+
Sbjct: 59 YAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAI 93
Score = 44 (20.5 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 440 DSRLLLSGSKDSTLKVWD 457
D + +GS DS LK+W+
Sbjct: 323 DGMAVATGSWDSFLKIWN 340
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 226 (84.6 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 69/302 (22%), Positives = 131/302 (43%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
R T+ GH + ++ + D R L S S D + +WD T + +WV+ A+
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 105
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPS---GNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ G + G + +T + + L GH +++ + L+ + ++
Sbjct: 106 APSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF----LDD--NQIIT 159
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLI 274
+S D +WD+ + + +GH+ V + DG + +G+ D +IK+W+
Sbjct: 160 SSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCR 219
Query: 275 RELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG------- 326
+ GH +N++A YA TG+ D T + + + + N I G
Sbjct: 220 QTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFS 279
Query: 327 NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
+ L++G DDF +W+ A+ + GH V+ + + DG VA+ S+D +K+
Sbjct: 280 RSGRLLLAGYDDFNCNIWD-AMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI 338
Query: 387 WN 388
WN
Sbjct: 339 WN 340
Score = 177 (67.4 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 69/269 (25%), Positives = 114/269 (42%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT-GKPSGNPLSGHKKWITGISWEPVHL 206
GH + + W D + LVS S+ G+L WD T K PL W+ ++
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAY----- 105
Query: 207 NAPCRRFVSASK-DGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGVIYTGSQDC 261
AP FV+ D I+ + R+ + +S GHT ++C ++ D I T S D
Sbjct: 106 -APSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDT 164
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEM-KKAALE 319
T +W+ G+ GH V SL+L+ + +GA D + K + + M ++ +
Sbjct: 165 TCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIG 224
Query: 320 RYNKIKGNA--PE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV---NHVYFSPDG 372
+ I A P +GSDD T L++ ++ M H ++ V FS G
Sbjct: 225 HESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQE--LLMYSHDNIICGITSVAFSRSG 282
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGH 401
+ + + D + +W+ G V GH
Sbjct: 283 RLLLAGYDDFNCNIWDAMKGDRAGVLAGH 311
Score = 136 (52.9 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 52/223 (23%), Positives = 88/223 (39%)
Query: 236 LSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-Y 293
L GH + + WG D ++ + SQD + +W++ + + WV + A +
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 294 ALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA----------PERLVSGSDDFTMFL 343
+ G D+ YS + R ++ G+ ++++ S D T L
Sbjct: 111 FVACGGLDNICSIYSLKTREGNVRVSR--ELPGHTGYLSCCRFLDDNQIITSSGDTTCAL 168
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W+ +Q GH V + +PDG+ S + D SIKLW+ F GH
Sbjct: 169 WDIETGQQT-VGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHES 227
Query: 404 PVYQIRF-ELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLL 445
+ + F Y F S+ D +C L+ AD LL+
Sbjct: 228 DINAVAFFPNGYAFTTGSD-----DATC--RLFDLRADQELLM 263
Score = 118 (46.6 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 428 MSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 487
+SCC L D +++ S D+T +WDI T + GH+ +V ++ +PDG
Sbjct: 146 LSCCRFL-----DDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFV 200
Query: 488 SGGKDRVLKLW 498
SG D +KLW
Sbjct: 201 SGACDASIKLW 211
Score = 113 (44.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 432 MSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGK 491
MSL S + D R +SG+ D+++K+WD+R +Q GH ++ AV + P+G +G
Sbjct: 188 MSL-SLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSD 246
Query: 492 DRVLKLW 498
D +L+
Sbjct: 247 DATCRLF 253
Score = 102 (41.0 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 23/69 (33%), Positives = 34/69 (49%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
C ++ ++S RLLL+G D +WD L GH + V + + DG VA+G
Sbjct: 271 CGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 490 GKDRVLKLW 498
D LK+W
Sbjct: 331 SWDSFLKIW 339
Score = 69 (29.3 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 25/95 (26%), Positives = 44/95 (46%)
Query: 308 SSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFL--WEPAVSKQPKTRMT--GHQQLV 363
S E++++ A + N+I+ R G T +P Q +TR T GH +
Sbjct: 2 SELEQLRQEAEQLRNQIRD---ARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKI 58
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNG-TTGKFVAV 397
+++ D + + SAS D + +W+ TT K A+
Sbjct: 59 YAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAI 93
Score = 44 (20.5 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 440 DSRLLLSGSKDSTLKVWD 457
D + +GS DS LK+W+
Sbjct: 323 DGMAVATGSWDSFLKIWN 340
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 226 (84.6 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 69/302 (22%), Positives = 131/302 (43%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
R T+ GH + ++ + D R L S S D + +WD T + +WV+ A+
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 105
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPS---GNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ G + G + +T + + L GH +++ + L+ + ++
Sbjct: 106 APSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF----LDD--NQIIT 159
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLI 274
+S D +WD+ + + +GH+ V + DG + +G+ D +IK+W+
Sbjct: 160 SSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCR 219
Query: 275 RELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG------- 326
+ GH +N++A YA TG+ D T + + + + N I G
Sbjct: 220 QTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFS 279
Query: 327 NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
+ L++G DDF +W+ A+ + GH V+ + + DG VA+ S+D +K+
Sbjct: 280 RSGRLLLAGYDDFNCNIWD-AMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI 338
Query: 387 WN 388
WN
Sbjct: 339 WN 340
Score = 177 (67.4 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 69/269 (25%), Positives = 114/269 (42%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT-GKPSGNPLSGHKKWITGISWEPVHL 206
GH + + W D + LVS S+ G+L WD T K PL W+ ++
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAY----- 105
Query: 207 NAPCRRFVSASK-DGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGVIYTGSQDC 261
AP FV+ D I+ + R+ + +S GHT ++C ++ D I T S D
Sbjct: 106 -APSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDT 164
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEM-KKAALE 319
T +W+ G+ GH V SL+L+ + +GA D + K + + M ++ +
Sbjct: 165 TCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIG 224
Query: 320 RYNKIKGNA--PE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV---NHVYFSPDG 372
+ I A P +GSDD T L++ ++ M H ++ V FS G
Sbjct: 225 HESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQE--LLMYSHDNIICGITSVAFSRSG 282
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGH 401
+ + + D + +W+ G V GH
Sbjct: 283 RLLLAGYDDFNCNIWDAMKGDRAGVLAGH 311
Score = 136 (52.9 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 52/223 (23%), Positives = 88/223 (39%)
Query: 236 LSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-Y 293
L GH + + WG D ++ + SQD + +W++ + + WV + A +
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 294 ALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA----------PERLVSGSDDFTMFL 343
+ G D+ YS + R ++ G+ ++++ S D T L
Sbjct: 111 FVACGGLDNICSIYSLKTREGNVRVSR--ELPGHTGYLSCCRFLDDNQIITSSGDTTCAL 168
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W+ +Q GH V + +PDG+ S + D SIKLW+ F GH
Sbjct: 169 WDIETGQQT-VGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHES 227
Query: 404 PVYQIRF-ELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLL 445
+ + F Y F S+ D +C L+ AD LL+
Sbjct: 228 DINAVAFFPNGYAFTTGSD-----DATC--RLFDLRADQELLM 263
Score = 118 (46.6 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 428 MSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 487
+SCC L D +++ S D+T +WDI T + GH+ +V ++ +PDG
Sbjct: 146 LSCCRFL-----DDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFV 200
Query: 488 SGGKDRVLKLW 498
SG D +KLW
Sbjct: 201 SGACDASIKLW 211
Score = 113 (44.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 432 MSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGK 491
MSL S + D R +SG+ D+++K+WD+R +Q GH ++ AV + P+G +G
Sbjct: 188 MSL-SLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSD 246
Query: 492 DRVLKLW 498
D +L+
Sbjct: 247 DATCRLF 253
Score = 102 (41.0 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 23/69 (33%), Positives = 34/69 (49%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
C ++ ++S RLLL+G D +WD L GH + V + + DG VA+G
Sbjct: 271 CGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 490 GKDRVLKLW 498
D LK+W
Sbjct: 331 SWDSFLKIW 339
Score = 69 (29.3 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 25/95 (26%), Positives = 44/95 (46%)
Query: 308 SSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFL--WEPAVSKQPKTRMT--GHQQLV 363
S E++++ A + N+I+ R G T +P Q +TR T GH +
Sbjct: 2 SELEQLRQEAEQLRNQIRD---ARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKI 58
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNG-TTGKFVAV 397
+++ D + + SAS D + +W+ TT K A+
Sbjct: 59 YAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAI 93
Score = 44 (20.5 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 440 DSRLLLSGSKDSTLKVWD 457
D + +GS DS LK+W+
Sbjct: 323 DGMAVATGSWDSFLKIWN 340
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 226 (84.6 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 69/302 (22%), Positives = 131/302 (43%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
R T+ GH + ++ + D R L S S D + +WD T + +WV+ A+
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 105
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPS---GNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ G + G + +T + + L GH +++ + L+ + ++
Sbjct: 106 APSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF----LDD--NQIIT 159
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLI 274
+S D +WD+ + + +GH+ V + DG + +G+ D +IK+W+
Sbjct: 160 SSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCR 219
Query: 275 RELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG------- 326
+ GH +N++A YA TG+ D T + + + + N I G
Sbjct: 220 QTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFS 279
Query: 327 NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKL 386
+ L++G DDF +W+ A+ + GH V+ + + DG VA+ S+D +K+
Sbjct: 280 RSGRLLLAGYDDFNCNIWD-AMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI 338
Query: 387 WN 388
WN
Sbjct: 339 WN 340
Score = 177 (67.4 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 69/269 (25%), Positives = 114/269 (42%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT-GKPSGNPLSGHKKWITGISWEPVHL 206
GH + + W D + LVS S+ G+L WD T K PL W+ ++
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAY----- 105
Query: 207 NAPCRRFVSASK-DGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGVIYTGSQDC 261
AP FV+ D I+ + R+ + +S GHT ++C ++ D I T S D
Sbjct: 106 -APSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDT 164
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEM-KKAALE 319
T +W+ G+ GH V SL+L+ + +GA D + K + + M ++ +
Sbjct: 165 TCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIG 224
Query: 320 RYNKIKGNA--PE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV---NHVYFSPDG 372
+ I A P +GSDD T L++ ++ M H ++ V FS G
Sbjct: 225 HESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQE--LLMYSHDNIICGITSVAFSRSG 282
Query: 373 QWVASASFDKSIKLWNGTTGKFVAVFRGH 401
+ + + D + +W+ G V GH
Sbjct: 283 RLLLAGYDDFNCNIWDAMKGDRAGVLAGH 311
Score = 136 (52.9 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 52/223 (23%), Positives = 88/223 (39%)
Query: 236 LSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-Y 293
L GH + + WG D ++ + SQD + +W++ + + WV + A +
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 294 ALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA----------PERLVSGSDDFTMFL 343
+ G D+ YS + R ++ G+ ++++ S D T L
Sbjct: 111 FVACGGLDNICSIYSLKTREGNVRVSR--ELPGHTGYLSCCRFLDDNQIITSSGDTTCAL 168
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W+ +Q GH V + +PDG+ S + D SIKLW+ F GH
Sbjct: 169 WDIETGQQT-VGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHES 227
Query: 404 PVYQIRF-ELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLL 445
+ + F Y F S+ D +C L+ AD LL+
Sbjct: 228 DINAVAFFPNGYAFTTGSD-----DATC--RLFDLRADQELLM 263
Score = 118 (46.6 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 428 MSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 487
+SCC L D +++ S D+T +WDI T + GH+ +V ++ +PDG
Sbjct: 146 LSCCRFL-----DDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFV 200
Query: 488 SGGKDRVLKLW 498
SG D +KLW
Sbjct: 201 SGACDASIKLW 211
Score = 113 (44.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 432 MSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGK 491
MSL S + D R +SG+ D+++K+WD+R +Q GH ++ AV + P+G +G
Sbjct: 188 MSL-SLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSD 246
Query: 492 DRVLKLW 498
D +L+
Sbjct: 247 DATCRLF 253
Score = 102 (41.0 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 23/69 (33%), Positives = 34/69 (49%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
C ++ ++S RLLL+G D +WD L GH + V + + DG VA+G
Sbjct: 271 CGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 490 GKDRVLKLW 498
D LK+W
Sbjct: 331 SWDSFLKIW 339
Score = 69 (29.3 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 25/95 (26%), Positives = 44/95 (46%)
Query: 308 SSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFL--WEPAVSKQPKTRMT--GHQQLV 363
S E++++ A + N+I+ R G T +P Q +TR T GH +
Sbjct: 2 SELEQLRQEAEQLRNQIRD---ARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKI 58
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNG-TTGKFVAV 397
+++ D + + SAS D + +W+ TT K A+
Sbjct: 59 YAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAI 93
Score = 44 (20.5 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 440 DSRLLLSGSKDSTLKVWD 457
D + +GS DS LK+W+
Sbjct: 323 DGMAVATGSWDSFLKIWN 340
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 223 (83.6 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 59/193 (30%), Positives = 94/193 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT--QTPMFKCTGHKNWVLCIAWSA 160
T+ GH V+SV S +G AS S D +RLWDL T Q W +A+S
Sbjct: 59 TLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWT--VAFSP 116
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
D K++ +GS G++ + ++GK + L K+I I++ P + S + DG
Sbjct: 117 DSKYIATGSHLGKVNIFGVESGKKE-HSLDTRGKFILSIAYSP-----DGKYLASGAIDG 170
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
I+D++ K + L GH + + + + D ++ T S D IK+++ L L G
Sbjct: 171 IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG 230
Query: 280 HGHWVNSLALSTE 292
HG WV S+A S +
Sbjct: 231 HGSWVLSVAFSPD 243
Score = 213 (80.0 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 50/158 (31%), Positives = 82/158 (51%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
+LS+A+SPDG+ LASG+ D + ++D+ T + GH + + +S D + LV+ S
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR 230
G ++ +D Q +G LSGH W+ +++ P + FVS+S D ++WD S R
Sbjct: 211 DGYIKIYDVQHANLAGT-LSGHGSWVLSVAFSPDDTH-----FVSSSSDKSIKVWDTSSR 264
Query: 231 KCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
CV H V VK+ G I + D I +++
Sbjct: 265 SCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIYD 302
Score = 160 (61.4 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 41/148 (27%), Positives = 74/148 (50%)
Query: 366 VYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF----ELIYCFRYPS- 420
+ +SPDG+++AS + D I +++ TGK + GH P+ + F +L+
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY 213
Query: 421 -NFYCV--VDMSCCMSLY-SW------SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGH 470
Y V +++ +S + SW S D +S S D ++KVWD ++ H
Sbjct: 214 IKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDH 273
Query: 471 ADEVFAVDWSPDGEKVASGGKDRVLKLW 498
D+V++V ++P G K+ S G DR + ++
Sbjct: 274 QDQVWSVKYNPTGSKIVSAGDDRAIHIY 301
Score = 160 (61.4 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 72/288 (25%), Positives = 125/288 (43%)
Query: 137 LNTQ-TPMFKCT-GHKNWVLCIAWSA---DGKH-LVSGSKAGELQCWDPQTGKPSGN-PL 189
++TQ + +FK H++ + AW DG +V+GS ++ W K L
Sbjct: 1 MSTQYSILFKQEHAHEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTL 60
Query: 190 SGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG 249
GH+ + ++ + N S+S D R+WD+ K + + + V +
Sbjct: 61 EGHQLGVVSVN---ISQNGAIA--ASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFS 115
Query: 250 GDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQY 307
D I TGS + ++ GK L G ++ S+A S + L +GA D +
Sbjct: 116 PDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 308 SSPEEMKKAALERYNK-IKGN--APER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
LE + I+ +P+ LV+ SDD + +++ + T ++GH
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT-LSGHGSW 234
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
V V FSPD S+S DKSIK+W+ ++ V F H V+ +++
Sbjct: 235 VLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKY 282
Score = 156 (60.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 35/124 (28%), Positives = 59/124 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ FSPD + L + S D ++++D+ +GH +WVL +A+S D
Sbjct: 185 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDD 244
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H VS S ++ WD + + N H+ + + + P + VSA D
Sbjct: 245 THFVSSSSDKSIKVWDTSS-RSCVNTFFDHQDQVWSVKYNPTG-----SKIVSAGDDRAI 298
Query: 223 RIWD 226
I+D
Sbjct: 299 HIYD 302
Score = 124 (48.7 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 46/180 (25%), Positives = 79/180 (43%)
Query: 334 SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW---NG- 389
S S D + LW+ KQ K+ G V FSPD +++A+ S + ++ +G
Sbjct: 81 SSSLDAHIRLWDLETGKQIKSMDAGPVDAWT-VAFSPDSKYIATGSHLGKVNIFGVESGK 139
Query: 390 ------TTGKFVAVFRGHVGPVYQIRFEL---IYCFRYPSN--FYCVVDMSCCMSLYSWS 438
T GKF+ Y + I F + + + + + ++S
Sbjct: 140 KEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS 199
Query: 439 ADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
DS+LL++ S D +K++D++ L L GH V +V +SPD S D+ +K+W
Sbjct: 200 PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVW 259
Score = 120 (47.3 bits), Expect = 0.00020, P = 0.00020
Identities = 24/88 (27%), Positives = 48/88 (54%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
++ ++ N + T++GH VLSVAFSPD S S D ++++WD ++++ + H+
Sbjct: 216 IYDVQHAN-LAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQ 274
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWD 178
+ V + ++ G +VS + +D
Sbjct: 275 DQVWSVKYNPTGSKIVSAGDDRAIHIYD 302
>WB|WBGene00011051 [details] [associations]
symbol:pfs-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0044428 "nuclear part" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0018996 eggNOG:COG2319 GO:GO:0040011
HSSP:P16649 GO:GO:0044428 GeneTree:ENSGT00540000070914 EMBL:Z83120
KO:K15542 RefSeq:NP_496985.1 ProteinModelPortal:Q9NAN8 SMR:Q9NAN8
PaxDb:Q9NAN8 EnsemblMetazoa:R06A4.9.1 EnsemblMetazoa:R06A4.9.2
GeneID:175092 KEGG:cel:CELE_R06A4.9 UCSC:R06A4.9.1 CTD:175092
WormBase:R06A4.9 InParanoid:Q9NAN8 OMA:LTKFIRT NextBio:886718
Uniprot:Q9NAN8
Length = 809
Score = 248 (92.4 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 82/292 (28%), Positives = 135/292 (46%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWD---LNTQTPMFKCTGHKNWVLCIAWSADGKHLVS 167
V SV +SP+G++L +G LW+ N +T + H + + + W+++ + L+S
Sbjct: 136 VYSVCWSPEGKRLITGCQTGEFTLWNGTAFNFETIL---QAHDSAIRALKWASNEQWLLS 192
Query: 168 GSKAGELQCWDPQTGKPSGNPLSGHK-KWITGISWEPVHLNAPCRRFVSASKDGDARIWD 226
+ G ++ W P + + S HK + I G+++ P + +F +AS DG AR+WD
Sbjct: 193 ADQGGYVKYWQPNMN--NAHMFSAHKDEAIRGLAFAPTDV-----KFATASDDGTARVWD 245
Query: 227 VSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCT--IKVWETTQGKLIRELKGHGHW 283
+ L GH V C+ W G+I TGS+D +K+W+ G + L+ H
Sbjct: 246 FARYTEERVLRGHGAEVRCIDWHPTKGLIATGSRDTQQPVKIWDPKSGSCLATLQEHKSS 305
Query: 284 VNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNK--IKGNA--P--ERL-VSG 335
V ++ + L TG DH K Y MK+ R +K + A P E L VSG
Sbjct: 306 VMAVEFNKNGNWLLTGGRDHLVKMYDI-RMMKEMRTYRAHKKEVISLAWHPIHEGLFVSG 364
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
D ++ W K+ H Q + + + P G +A+ S D + K W
Sbjct: 365 GGDGSIVYWMVDGEKEIGLLEHAHDQAIWSMKWHPLGHILATGSNDNNTKFW 416
Score = 148 (57.2 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 47/190 (24%), Positives = 80/190 (42%)
Query: 97 VNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI 156
+N A EA+ +AF+P + A+ S D T R+WD T GH V CI
Sbjct: 206 MNNAHMFSAHKDEAIRGLAFAPTDVKFATASDDGTARVWDFARYTEERVLRGHGAEVRCI 265
Query: 157 AWSADGKHLVSGSKAGE--LQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
W + +GS+ + ++ WDP++G L HK + + + N +
Sbjct: 266 DWHPTKGLIATGSRDTQQPVKIWDPKSGSCLAT-LQEHKSSVMAVEF-----NKNGNWLL 319
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG--DGVIYTGSQDCTIKVWETTQGK 272
+ +D +++D+ + K + H V + W +G+ +G D +I W K
Sbjct: 320 TGGRDHLVKMYDIRMMKEMRTYRAHKKEVISLAWHPIHEGLFVSGGGDGSIVYWMVDGEK 379
Query: 273 LIRELKGHGH 282
I L+ H H
Sbjct: 380 EIGLLE-HAH 388
Score = 136 (52.9 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 36/128 (28%), Positives = 58/128 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C AT+ H +V++V F+ +G L +G D V+++D+ M HK V+ +AW
Sbjct: 295 CLATLQEHKSSVMAVEFNKNGNWLLTGGRDHLVKMYDIRMMKEMRTYRAHKKEVISLAWH 354
Query: 160 ADGKHL-VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV-HLNAPCRRFVSAS 217
+ L VSG G + W K G H + I + W P+ H+ A + S
Sbjct: 355 PIHEGLFVSGGGDGSIVYWMVDGEKEIGLLEHAHDQAIWSMKWHPLGHILA------TGS 408
Query: 218 KDGDARIW 225
D + + W
Sbjct: 409 NDNNTKFW 416
Score = 118 (46.6 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 44/190 (23%), Positives = 78/190 (41%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTP-MFKCTGHKNWVLC-IAWSAD 161
+ H A+ ++ ++ + + L S V+ W N MF + HK+ + +A++
Sbjct: 171 LQAHDSAIRALKWASNEQWLLSADQGGYVKYWQPNMNNAHMF--SAHKDEAIRGLAFAPT 228
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
+ S G + WD L GH + I W P + S+D
Sbjct: 229 DVKFATASDDGTARVWD-FARYTEERVLRGHGAEVRCIDWHPTK-----GLIATGSRDTQ 282
Query: 222 --ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELK 278
+IWD C+ L H +V V++ +G + TG +D +K+++ K +R +
Sbjct: 283 QPVKIWDPKSGSCLATLQEHKSSVMAVEFNKNGNWLLTGGRDHLVKMYDIRMMKEMRTYR 342
Query: 279 GHGHWVNSLA 288
H V SLA
Sbjct: 343 AHKKEVISLA 352
Score = 73 (30.8 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 443 LLLSGSKDSTLKVWDIRTQKLKQDLPGHADE--VFAVDWSPDGEKVASGGKDRVLKLW 498
L +SG D ++ W + +K + L HA + ++++ W P G +A+G D K W
Sbjct: 360 LFVSGGGDGSIVYWMVDGEK-EIGLLEHAHDQAIWSMKWHPLGHILATGSNDNNTKFW 416
Score = 42 (19.8 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 437 WSADSRLLLSGSKDSTLKVW 456
W +L +GS D+ K W
Sbjct: 397 WHPLGHILATGSNDNNTKFW 416
Score = 40 (19.1 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 315 KAALERYNKIKGNAPERLVSGSDDFT 340
K A ++ ++ N+ + + +GSDDFT
Sbjct: 521 KKAQRQFERMWNNS-KGIGAGSDDFT 545
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 243 (90.6 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 66/205 (32%), Positives = 101/205 (49%)
Query: 104 IAGHTEAVLSVAFSPD-GRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
I H+ V S+ GR LA+G D V +W + Q TGH + + SA
Sbjct: 16 IVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSV-AQLRHDLLTGHTTPIESLQISAKE 74
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGD 221
+ +V+GS++G ++ WD + K L GHK I + + P FV S S D D
Sbjct: 75 ELIVAGSQSGSIRVWDLEAAKIL-RTLLGHKANICSLDFHPYG------SFVASGSLDTD 127
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
++WDV + C+ HT AV C+++ DG + + + D T+K+W+ T GK++ E GH
Sbjct: 128 IKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGH 187
Query: 281 GHWVNSLAL--STEYALRTGAFDHT 303
VN + S EY L +G+ T
Sbjct: 188 YGPVNVVEFHPSIEYLLASGSSSMT 212
Score = 210 (79.0 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 61/214 (28%), Positives = 98/214 (45%)
Query: 61 HELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCSA--TIAGHTEAVLSVAFSP 118
H+LL + +E ++S ++ L + R+ + T+ GH + S+ F P
Sbjct: 55 HDLLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHP 114
Query: 119 DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
G +ASGS DT ++LWD+ + +FK H V C+ +S DGK L S + ++ WD
Sbjct: 115 YGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWD 174
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPV--HLNAPCRRFVSASKDGDARIWDVSLRKCVICL 236
GK +GH + + + P +L A S S R WD+ V C+
Sbjct: 175 LTAGKVMFE-FTGHYGPVNVVEFHPSIEYLLA------SGSSSMTIRFWDLEKFHVVSCI 227
Query: 237 SGHTLAVTCVKWGGDGV-IYTGSQDCTIKV--WE 267
V C+ + DG +Y G QD +++V WE
Sbjct: 228 EEEATPVRCILFNPDGCCLYGGFQD-SLRVYGWE 260
Score = 177 (67.4 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 62/197 (31%), Positives = 88/197 (44%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRE-LKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPE 311
++ TG DC + VW Q L + L GH + SL +S + L A +G
Sbjct: 35 LLATGGDDCRVNVWSVAQ--LRHDLLTGHTTPIESLQISAKEELIV-AGSQSGSIRVWDL 91
Query: 312 EMKKAALERYNKIKGNA------P--ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV 363
E K L K N P + SGS D + LW+ K + H Q V
Sbjct: 92 EAAKI-LRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVR-RKGCIFKYKSHTQAV 149
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFY 423
+ FSPDG+W+ASA+ D ++KLW+ T GK + F GH GPV + F +PS Y
Sbjct: 150 RCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEF-------HPSIEY 202
Query: 424 CVVDMSCCMSLYSWSAD 440
+ S M++ W +
Sbjct: 203 LLASGSSSMTIRFWDLE 219
Score = 146 (56.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 45/224 (20%), Positives = 95/224 (42%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GHT + S+ S + +GS ++R+WDL + GHK + + + G
Sbjct: 58 LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGS 117
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+ SGS +++ WD + K H + + + + P + SA+ D +
Sbjct: 118 FVASGSLDTDIKLWDVRR-KGCIFKYKSHTQAVRCLRFSP-----DGKWLASAADDHTVK 171
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGG--DGVIYTGSQDCTIKVWETTQGKLIRELKGHG 281
+WD++ K + +GH V V++ + ++ +GS TI+ W+ + ++ ++
Sbjct: 172 LWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEA 231
Query: 282 HWVNSLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERYNKI 324
V + + + G F + + Y PE + + K+
Sbjct: 232 TPVRCILFNPDGCCLYGGFQDSLRVYGWEPERCFDVVVVNWGKV 275
Score = 131 (51.2 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 43/192 (22%), Positives = 81/192 (42%)
Query: 324 IKGNAPERLVS-GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
+ G + RL++ G DD + +W +V++ +TGH + + S + + + S
Sbjct: 27 VLGKSTGRLLATGGDDCRVNVW--SVAQLRHDLLTGHTTPIESLQISAKEELIVAGSQSG 84
Query: 383 SIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDM-----SCCMSLYS- 436
SI++W+ K + GH + + F F + + + C+ Y
Sbjct: 85 SIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKS 144
Query: 437 ---------WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKV- 486
+S D + L S + D T+K+WD+ K+ + GH V V++ P E +
Sbjct: 145 HTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLL 204
Query: 487 ASGGKDRVLKLW 498
ASG ++ W
Sbjct: 205 ASGSSSMTIRFW 216
>CGD|CAL0000124 [details] [associations]
symbol:ASC1 species:5476 "Candida albicans" [GO:0005092
"GDP-dissociation inhibitor activity" evidence=IGI;ISA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IGI;ISA]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036244 "cellular response to neutral pH"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0010255 "glucose mediated
signaling pathway" evidence=IEA] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 204 (76.9 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 53/186 (28%), Positives = 90/186 (48%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH+ V V S DG S S D T+RLWDL T + GHK VL ++ + + + +
Sbjct: 64 GHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQI 123
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
VS S+ ++ W+ G+ L+GH W++ + P ++ +SAS D + W
Sbjct: 124 VSASRDKTVKVWNT-IGECMAT-LTGHNDWVSAVRISPSDQSSTV---ISASWDKTVKSW 178
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGS-QDCTIKVWETTQGKLIRELKGHGHWV 284
D++ GHT ++C+ DG + + +D I +W+ + K + L+ V
Sbjct: 179 DLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAE-V 237
Query: 285 NSLALS 290
++LA S
Sbjct: 238 HALAFS 243
Score = 189 (71.6 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 61/207 (29%), Positives = 101/207 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDL----NTQ--TPMFKCTGHKNWVLC 155
T+ GH V S+A +P L SGS D T+ W L + Q P GH + V
Sbjct: 12 TLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQD 71
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ SADG + +S S L+ WD +TG+ + GHK + +S + N R+ VS
Sbjct: 72 VTISADGAYALSASWDRTLRLWDLETGETTQR-FVGHKGDVLSVS---IAKNL--RQIVS 125
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG-GD--GVIYTGSQDCTIKVWETTQGK 272
AS+D ++W+ ++ +C+ L+GH V+ V+ D + + S D T+K W+
Sbjct: 126 ASRDKTVKVWN-TIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYS 184
Query: 273 LIRELKGHGHWVNSLALSTEYALRTGA 299
+ + GH +++ + LS + +L A
Sbjct: 185 VNADFIGHTGYISCITLSPDGSLCASA 211
Score = 187 (70.9 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 50/163 (30%), Positives = 73/163 (44%)
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF- 410
PK GH +V V S DG + SAS+D++++LW+ TG+ F GH G V +
Sbjct: 58 PKKSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIA 117
Query: 411 ----ELIYCFRYPSNFYCVVDMSCCMSLYS---W--------SADSRLLLSGSKDSTLKV 455
+++ R + C +L W S S ++S S D T+K
Sbjct: 118 KNLRQIVSASRDKTVKVWNTIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKS 177
Query: 456 WDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
WD+ + D GH + + SPDG AS GKD V+ LW
Sbjct: 178 WDLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILW 220
Score = 154 (59.3 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 70/253 (27%), Positives = 110/253 (43%)
Query: 148 GHKNWVLCIAWS-ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW--EPV 204
GH WV +A + A L+SGS+ L W G+ N KK G S + V
Sbjct: 15 GHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGED--NQYGIPKKSFKGHSHIVQDV 72
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTI 263
++A +SAS D R+WD+ + GH V V + I + S+D T+
Sbjct: 73 TISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTV 132
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALSTEYALRT---GAFDHTGKQYSSPEEMKKAAL-- 318
KVW T G+ + L GH WV+++ +S T ++D T K + + A
Sbjct: 133 KVWNTI-GECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIG 191
Query: 319 -ERYNKIKGNAPERLV--SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVY-FSPDGQW 374
Y +P+ + S D + LW+ ++K KT T + H FSP+ W
Sbjct: 192 HTGYISCITLSPDGSLCASAGKDGVIILWD--LNKN-KTLYTLEAKAEVHALAFSPNRYW 248
Query: 375 VASASFDKSIKLW 387
+A+A+ IK++
Sbjct: 249 LAAAT-TSGIKIF 260
Score = 146 (56.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 45/176 (25%), Positives = 71/176 (40%)
Query: 97 VNRCSATIAGHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
+ C AT+ GH + V +V SP + + S S D TV+ WDL + GH ++
Sbjct: 138 IGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIGHTGYIS 197
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH--LNAPCRR 212
CI S DG S K G + WD K L K + +++ P L A
Sbjct: 198 CITLSPDGSLCASAGKDGVIILWDLNKNKTLYT-LEA-KAEVHALAFSPNRYWLAAATTS 255
Query: 213 FVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
+ K + + D + + + + W DG ++ G D I+VW+
Sbjct: 256 GIKIFKLQERSLLDELKPEFAVGATAKDPEAISLAWSADGQNLFAGYTDNVIRVWQ 311
Score = 126 (49.4 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 54/215 (25%), Positives = 92/215 (42%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSL---RKCVI---CLSGHTLA 242
L GH W+T ++ P H + +S S+D W ++ + I GH+
Sbjct: 13 LEGHNGWVTSLATTPAHPDL----LLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHI 68
Query: 243 VTCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAF 300
V V DG + S D T+++W+ G+ + GH V S++++ + + +
Sbjct: 69 VQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASR 128
Query: 301 DHTGKQYSSPEEMKKAALERYN------KIK-GNAPERLVSGSDDFTMFLWEPAVSKQPK 353
D T K +++ E A L +N +I + ++S S D T+ W+ A
Sbjct: 129 DKTVKVWNTIGECM-ATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLA-DYSVN 186
Query: 354 TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
GH ++ + SPDG ASA D I LW+
Sbjct: 187 ADFIGHTGYISCITLSPDGSLCASAGKDGVIILWD 221
Score = 68 (29.0 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 441 SRLLLSGSKDSTLKVWDIRTQKLKQDL-PGHA------D-EVFAVDWSPDGEKVASGGKD 492
+R L+ + S +K++ ++ + L +L P A D E ++ WS DG+ + +G D
Sbjct: 245 NRYWLAAATTSGIKIFKLQERSLLDELKPEFAVGATAKDPEAISLAWSADGQNLFAGYTD 304
Query: 493 RVLKLW 498
V+++W
Sbjct: 305 NVIRVW 310
Score = 65 (27.9 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRT 460
+WSAD + L +G D+ ++VW + T
Sbjct: 290 AWSADGQNLFAGYTDNVIRVWQVMT 314
>UNIPROTKB|P83774 [details] [associations]
symbol:ASC1 "Guanine nucleotide-binding protein subunit
beta-like protein" species:237561 "Candida albicans SC5314"
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IMP] [GO:0005092 "GDP-dissociation inhibitor activity"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0036244
"cellular response to neutral pH" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 204 (76.9 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 53/186 (28%), Positives = 90/186 (48%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH+ V V S DG S S D T+RLWDL T + GHK VL ++ + + + +
Sbjct: 64 GHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQI 123
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
VS S+ ++ W+ G+ L+GH W++ + P ++ +SAS D + W
Sbjct: 124 VSASRDKTVKVWNT-IGECMAT-LTGHNDWVSAVRISPSDQSSTV---ISASWDKTVKSW 178
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGS-QDCTIKVWETTQGKLIRELKGHGHWV 284
D++ GHT ++C+ DG + + +D I +W+ + K + L+ V
Sbjct: 179 DLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAE-V 237
Query: 285 NSLALS 290
++LA S
Sbjct: 238 HALAFS 243
Score = 189 (71.6 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 61/207 (29%), Positives = 101/207 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDL----NTQ--TPMFKCTGHKNWVLC 155
T+ GH V S+A +P L SGS D T+ W L + Q P GH + V
Sbjct: 12 TLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQD 71
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+ SADG + +S S L+ WD +TG+ + GHK + +S + N R+ VS
Sbjct: 72 VTISADGAYALSASWDRTLRLWDLETGETTQR-FVGHKGDVLSVS---IAKNL--RQIVS 125
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG-GD--GVIYTGSQDCTIKVWETTQGK 272
AS+D ++W+ ++ +C+ L+GH V+ V+ D + + S D T+K W+
Sbjct: 126 ASRDKTVKVWN-TIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYS 184
Query: 273 LIRELKGHGHWVNSLALSTEYALRTGA 299
+ + GH +++ + LS + +L A
Sbjct: 185 VNADFIGHTGYISCITLSPDGSLCASA 211
Score = 187 (70.9 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 50/163 (30%), Positives = 73/163 (44%)
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF- 410
PK GH +V V S DG + SAS+D++++LW+ TG+ F GH G V +
Sbjct: 58 PKKSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIA 117
Query: 411 ----ELIYCFRYPSNFYCVVDMSCCMSLYS---W--------SADSRLLLSGSKDSTLKV 455
+++ R + C +L W S S ++S S D T+K
Sbjct: 118 KNLRQIVSASRDKTVKVWNTIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKS 177
Query: 456 WDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
WD+ + D GH + + SPDG AS GKD V+ LW
Sbjct: 178 WDLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILW 220
Score = 154 (59.3 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 70/253 (27%), Positives = 110/253 (43%)
Query: 148 GHKNWVLCIAWS-ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW--EPV 204
GH WV +A + A L+SGS+ L W G+ N KK G S + V
Sbjct: 15 GHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGED--NQYGIPKKSFKGHSHIVQDV 72
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTI 263
++A +SAS D R+WD+ + GH V V + I + S+D T+
Sbjct: 73 TISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTV 132
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALSTEYALRT---GAFDHTGKQYSSPEEMKKAAL-- 318
KVW T G+ + L GH WV+++ +S T ++D T K + + A
Sbjct: 133 KVWNTI-GECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIG 191
Query: 319 -ERYNKIKGNAPERLV--SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVY-FSPDGQW 374
Y +P+ + S D + LW+ ++K KT T + H FSP+ W
Sbjct: 192 HTGYISCITLSPDGSLCASAGKDGVIILWD--LNKN-KTLYTLEAKAEVHALAFSPNRYW 248
Query: 375 VASASFDKSIKLW 387
+A+A+ IK++
Sbjct: 249 LAAAT-TSGIKIF 260
Score = 146 (56.5 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 45/176 (25%), Positives = 71/176 (40%)
Query: 97 VNRCSATIAGHTEAVLSVAFSPDGRQ--LASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
+ C AT+ GH + V +V SP + + S S D TV+ WDL + GH ++
Sbjct: 138 IGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIGHTGYIS 197
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH--LNAPCRR 212
CI S DG S K G + WD K L K + +++ P L A
Sbjct: 198 CITLSPDGSLCASAGKDGVIILWDLNKNKTLYT-LEA-KAEVHALAFSPNRYWLAAATTS 255
Query: 213 FVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
+ K + + D + + + + W DG ++ G D I+VW+
Sbjct: 256 GIKIFKLQERSLLDELKPEFAVGATAKDPEAISLAWSADGQNLFAGYTDNVIRVWQ 311
Score = 126 (49.4 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 54/215 (25%), Positives = 92/215 (42%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSL---RKCVI---CLSGHTLA 242
L GH W+T ++ P H + +S S+D W ++ + I GH+
Sbjct: 13 LEGHNGWVTSLATTPAHPDL----LLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHI 68
Query: 243 VTCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAF 300
V V DG + S D T+++W+ G+ + GH V S++++ + + +
Sbjct: 69 VQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASR 128
Query: 301 DHTGKQYSSPEEMKKAALERYN------KIK-GNAPERLVSGSDDFTMFLWEPAVSKQPK 353
D T K +++ E A L +N +I + ++S S D T+ W+ A
Sbjct: 129 DKTVKVWNTIGECM-ATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLA-DYSVN 186
Query: 354 TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
GH ++ + SPDG ASA D I LW+
Sbjct: 187 ADFIGHTGYISCITLSPDGSLCASAGKDGVIILWD 221
Score = 68 (29.0 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 441 SRLLLSGSKDSTLKVWDIRTQKLKQDL-PGHA------D-EVFAVDWSPDGEKVASGGKD 492
+R L+ + S +K++ ++ + L +L P A D E ++ WS DG+ + +G D
Sbjct: 245 NRYWLAAATTSGIKIFKLQERSLLDELKPEFAVGATAKDPEAISLAWSADGQNLFAGYTD 304
Query: 493 RVLKLW 498
V+++W
Sbjct: 305 NVIRVW 310
Score = 65 (27.9 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRT 460
+WSAD + L +G D+ ++VW + T
Sbjct: 290 AWSADGQNLFAGYTDNVIRVWQVMT 314
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 241 (89.9 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 65/210 (30%), Positives = 100/210 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T GH + + VAF P G+ L + S D T RLWD+NT + GH V IA+ DG
Sbjct: 334 TFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDG 393
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
S + WD +TG+ S GH K + +++ P N S +D
Sbjct: 394 ALAASCGLDSLARVWDLRTGR-SILVFQGHIKPVFSVNFSP---NG--YHLASGGEDNQC 447
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGG-DGV-IYTGSQDCTIKVWETTQGKLIRELKGH 280
RIWD+ +RK + + H V+ VK+ +G + T S D + +W L++ L GH
Sbjct: 448 RIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGH 507
Query: 281 GHWVNSLALSTEYA-LRTGAFDHTGKQYSS 309
V SL ++ + + + T + D T K ++S
Sbjct: 508 ESKVASLDITADSSCIATVSHDRTIKLWTS 537
Score = 179 (68.1 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 63/257 (24%), Positives = 110/257 (42%)
Query: 97 VNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLN-TQTPMFKCTGHKNWVLC 155
V A + H E V FSP LA+ S D T +LW + T F+ GH + +
Sbjct: 287 VTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQTFE--GHLDRLAR 344
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
+A+ GK+L + S + WD TG GH + + GI+++ A S
Sbjct: 345 VAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQ-EGHSRSVYGIAFQQDGALA-----AS 398
Query: 216 ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLI 274
D AR+WD+ + ++ GH V V + +G + +G +D ++W+ K +
Sbjct: 399 CGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSL 458
Query: 275 RELKGHGHWVNSLALSTE--YALRTGAFDHTGKQYSSPE-EMKKAALERYNKIKG---NA 328
+ H + V+ + + Y L T ++D +S + + K+ +K+ A
Sbjct: 459 YIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITA 518
Query: 329 PERLVSG-SDDFTMFLW 344
++ S D T+ LW
Sbjct: 519 DSSCIATVSHDRTIKLW 535
Score = 173 (66.0 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 50/172 (29%), Positives = 82/172 (47%)
Query: 343 LWE-PAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
LWE P V+ + H++ V FSP +A+AS D++ KLW T G + F GH
Sbjct: 281 LWEMPQVTNTIAV-LKDHKERATDVVFSPVDDCLATASADRTAKLWK-TDGTLLQTFEGH 338
Query: 402 VGPVYQIRF----ELIYCFRYPSNFYC---------VVDMSCCMSLY--SWSADSRLLLS 446
+ + ++ F + + Y + ++ S+Y ++ D L S
Sbjct: 339 LDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAAS 398
Query: 447 GSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
DS +VWD+RT + GH VF+V++SP+G +ASGG+D ++W
Sbjct: 399 CGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIW 450
Score = 164 (62.8 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 49/179 (27%), Positives = 79/179 (44%)
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
S D T LW+ + + GH + V + F DG AS D ++W+ TG+ +
Sbjct: 358 SYDKTWRLWDINTGAELLLQ-EGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSI 416
Query: 396 AVFRGHVGPVYQIRFEL--IYCFRYPSNFYCVV-DMSCCMSLYSWSADSRL--------- 443
VF+GH+ PV+ + F + + C + D+ SLY A + L
Sbjct: 417 LVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQ 476
Query: 444 ----LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L + S D + +W R L + L GH +V ++D + D +A+ DR +KLW
Sbjct: 477 EGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW 535
Score = 156 (60.0 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 66/296 (22%), Positives = 120/296 (40%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT-GHKNWVLCIAWSADGKH 164
G + +FS DG+ LA+ S +LW++ T HK + +S
Sbjct: 253 GDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDC 312
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
L + S + W +T GH + +++ P + + S D R+
Sbjct: 313 LATASADRTAKLW--KTDGTLLQTFEGHLDRLARVAFHPSG-----KYLGTTSYDKTWRL 365
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGHW 283
WD++ ++ GH+ +V + + DG + D +VW+ G+ I +GH
Sbjct: 366 WDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKP 425
Query: 284 VNSLALSTE-YALRTGAFDHTGKQYSSPEEMKK------AALERYNKIKGNAPER--LVS 334
V S+ S Y L +G D+ + + M+K A +++K E L +
Sbjct: 426 VFSVNFSPNGYHLASGGEDNQCRIWDL--RMRKSLYIIPAHANLVSQVKYEPQEGYFLAT 483
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGT 390
S D + +W K+ + GH+ V + + D +A+ S D++IKLW +
Sbjct: 484 ASYDMKVNIWSGRDFSLVKS-LAGHESKVASLDITADSSCIATVSHDRTIKLWTSS 538
>UNIPROTKB|F1SAY9 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:FP085476
EMBL:CU468902 Ensembl:ENSSSCT00000007369 Uniprot:F1SAY9
Length = 943
Score = 179 (68.1 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 59/203 (29%), Positives = 93/203 (45%)
Query: 132 VRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGN-PLS 190
V +WDL + G K+ V C+ S DG HL G + G ++ + +G+ GN +
Sbjct: 47 VFIWDLRKGEKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGE--GNVTFN 104
Query: 191 GHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG 250
GHK +T + ++ L R S SKD D +WDV + L GH A+T +
Sbjct: 105 GHKAAVTSLKYD--QLGG---RLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLR 159
Query: 251 D-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGKQYS 308
+ ++ + +D +K W+ + + GH V L L S E L TGA D + +
Sbjct: 160 EKNLLVSSGKDTMVKWWDLDTQHCFKTVVGHRTEVWGLVLVSEEKRLITGASDSELRAWD 219
Query: 309 SP--EEMKKAALERYNKIKGNAP 329
EE++ KIKG++P
Sbjct: 220 IAYLEEIEDPEEPEPKKIKGSSP 242
Score = 172 (65.6 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 76/310 (24%), Positives = 132/310 (42%)
Query: 95 RPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
+PV TI GH V +++FS D + SG+ ++ +++W+ +T + T + L
Sbjct: 402 QPVRTSRITIGGHRSDVRTLSFSSDNIAVLSGAAES-IKIWNRSTLQCIRTMTCE--YAL 458
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
C + + +V G+K G+LQ +D +G + H + +S P
Sbjct: 459 CSFFVPGDRQVVIGTKTGKLQLYDLASGNLL-ETVDAHDGALWSLSLSPDQRGFVTGGAD 517
Query: 215 SASKDGDARIW--DVSLRKCVICLSGHTLA----VTCVKWGGDGVIYTGSQ-DCTIKVWE 267
+ K D + + S +K + TL V CV + + + S DCT+K++
Sbjct: 518 KSVKFWDFELVKDENSTQKRLSVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIFY 577
Query: 268 TTQGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSP-EEMKKAALER----- 320
K L GH V + +S + AL TG+ D K + + K+
Sbjct: 578 VDTLKFFLSLYGHKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVM 637
Query: 321 YNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF 380
Y K + +G D + W+ + +T + GH Q + + SP G +V S+S
Sbjct: 638 YLKFVPKSHLFFTAGKDR-KIKQWDADKFEHVQT-LEGHHQEIWCLAISPSGDYVVSSSH 695
Query: 381 DKSIKLWNGT 390
DKS++LW T
Sbjct: 696 DKSLRLWERT 705
Score = 165 (63.1 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 55/194 (28%), Positives = 91/194 (46%)
Query: 109 EAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSG 168
E VL V++SP+ + LA D TV+++ ++T GHK V+C+ S DG + +G
Sbjct: 550 EEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISYDGALIATG 609
Query: 169 SKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV-HLNAPCRRFVSASKDGDARIWDV 227
S ++ W G L H + + + P HL F +A KD + WD
Sbjct: 610 SADRNVKIWGLDFGD-CHKSLFAHDDSVMYLKFVPKSHL------FFTAGKDRKIKQWDA 662
Query: 228 SLRKCVICLSGHTLAVTC--VKWGGDGVIYTGSQDCTIKVWETTQGKLI----RELKGHG 281
+ V L GH + C + GD V+ + S D ++++WE T+ LI RE++
Sbjct: 663 DKFEHVQTLEGHHQEIWCLAISPSGDYVV-SSSHDKSLRLWERTREPLILEEEREMQREA 721
Query: 282 HWVNSLALSTEYAL 295
+ S+A + A+
Sbjct: 722 EYEESVAKEDQPAV 735
Score = 148 (57.2 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 35/128 (27%), Positives = 66/128 (51%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
+ T GH AV S+ + G +LASGS DT + +WD+ ++ +++ GHK+ + +
Sbjct: 100 NVTFNGHKAAVTSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLR 159
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
+ LVS K ++ WD T + + GH+ + G+ L + +R ++ + D
Sbjct: 160 EKNLLVSSGKDTMVKWWDLDT-QHCFKTVVGHRTEVWGLV-----LVSEEKRLITGASDS 213
Query: 221 DARIWDVS 228
+ R WD++
Sbjct: 214 ELRAWDIA 221
Score = 142 (55.0 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 48/166 (28%), Positives = 72/166 (43%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ G V + SPDG LA G D ++R++ L + GHK V + + G
Sbjct: 61 LQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAVTSLKYDQLGG 120
Query: 164 HLVSGSKAGELQCWDPQTGKPSG-NPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
L SGSK ++ WD SG L GHK IT + + L VS+ KD
Sbjct: 121 RLASGSKDTDIIVWD--VINESGLYRLKGHKDAIT----QALFLREK-NLLVSSGKDTMV 173
Query: 223 RIWDVSLRKCVICLSGHTLAVT-CVKWGGDGVIYTGSQDCTIKVWE 267
+ WD+ + C + GH V V + + TG+ D ++ W+
Sbjct: 174 KWWDLDTQHCFKTVVGHRTEVWGLVLVSEEKRLITGASDSELRAWD 219
Score = 120 (47.3 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 29/97 (29%), Positives = 45/97 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH +A+ F + L S DT V+ WDL+TQ GH+ V + ++ K
Sbjct: 145 LKGHKDAITQALFLREKNLLVSSGKDTMVKWWDLDTQHCFKTVVGHRTEVWGLVLVSEEK 204
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGIS 200
L++G+ EL+ WD + +P K I G S
Sbjct: 205 RLITGASDSELRAWDIAYLEEIEDPEEPEPKKIKGSS 241
Score = 117 (46.2 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 46/164 (28%), Positives = 72/164 (43%)
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVY--Q 407
KQ +T + L V +SP+ + +A + D ++K++ T KF GH PV
Sbjct: 541 KQTRTLQLDEEVLC--VSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMD 598
Query: 408 IRFE--LIYCFRYPSNFYCV-VDMSCC-MSLYS---------WSADSRLLLSGSKDSTLK 454
I ++ LI N +D C SL++ + S L + KD +K
Sbjct: 599 ISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLKFVPKSHLFFTAGKDRKIK 658
Query: 455 VWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
WD + Q L GH E++ + SP G+ V S D+ L+LW
Sbjct: 659 QWDADKFEHVQTLEGHHQEIWCLAISPSGDYVVSSSHDKSLRLW 702
Score = 100 (40.3 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 420 SNFYCVVDMSCCMSLYSWSADS-RLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 478
S C+ M+C +L S+ R ++ G+K L+++D+ + L + + H ++++
Sbjct: 444 STLQCIRTMTCEYALCSFFVPGDRQVVIGTKTGKLQLYDLASGNLLETVDAHDGALWSLS 503
Query: 479 WSPDGEKVASGGKDRVLKLW 498
SPD +GG D+ +K W
Sbjct: 504 LSPDQRGFVTGGADKSVKFW 523
Score = 99 (39.9 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 34/137 (24%), Positives = 63/137 (45%)
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETTQGKLIRE 276
+DG RI+ + + + +GH AVT +K+ G + +GS+D I VW+ +
Sbjct: 85 EDGSIRIFSLLSGEGNVTFNGHKAAVTSLKYDQLGGRLASGSKDTDIIVWDVINESGLYR 144
Query: 277 LKGHGHWVN-SLALSTEYALRTGAFDHTGKQYS-SPEEMKKAALERYNKIKG----NAPE 330
LKGH + +L L + L + D K + + K + ++ G + +
Sbjct: 145 LKGHKDAITQALFLREKNLLVSSGKDTMVKWWDLDTQHCFKTVVGHRTEVWGLVLVSEEK 204
Query: 331 RLVSGSDDFTMFLWEPA 347
RL++G+ D + W+ A
Sbjct: 205 RLITGASDSELRAWDIA 221
Score = 74 (31.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 44/185 (23%), Positives = 75/185 (40%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQ 270
R+V+ IWD+ + ++ L G VTC+ DG+ + G +D +I+++
Sbjct: 37 RYVAVPACEHVFIWDLRKGEKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLS 96
Query: 271 GKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA- 328
G+ GH V SL L +G+ D + E L+ + A
Sbjct: 97 GEGNVTFNGHKAAVTSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQAL 156
Query: 329 --PER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV-NHVYFSPDGQWVASASFDKS 383
E+ LVS D TM W ++ + GH+ V V S + + + AS D
Sbjct: 157 FLREKNLLVSSGKD-TMVKWWDLDTQHCFKTVVGHRTEVWGLVLVSEEKRLITGAS-DSE 214
Query: 384 IKLWN 388
++ W+
Sbjct: 215 LRAWD 219
Score = 69 (29.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDL 137
C T+ GH V + + ++L +G+ D+ +R WD+
Sbjct: 183 CFKTVVGHRTEVWGLVLVSEEKRLITGASDSELRAWDI 220
Score = 62 (26.9 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 39/136 (28%), Positives = 58/136 (42%)
Query: 346 PAV-SKQP-KT-RMT--GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFR- 399
P+V + QP +T R+T GH+ V + FS D V S + + SIK+WN +T + +
Sbjct: 396 PSVPASQPVRTSRITIGGHRSDVRTLSFSSDNIAVLSGAAE-SIKIWNRSTLQCIRTMTC 454
Query: 400 ----------GHVGPVYQIRFELIYCFRYPS-NFYCVVDM--SCCMSLYSWSADSRLLLS 446
G V + + + S N VD SL S S D R ++
Sbjct: 455 EYALCSFFVPGDRQVVIGTKTGKLQLYDLASGNLLETVDAHDGALWSL-SLSPDQRGFVT 513
Query: 447 GSKDSTLKVWDIRTQK 462
G D ++K WD K
Sbjct: 514 GGADKSVKFWDFELVK 529
Score = 53 (23.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 458 IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+RT ++ + GH +V + +S D V SG + + K+W
Sbjct: 404 VRTSRIT--IGGHRSDVRTLSFSSDNIAVLSGAAESI-KIW 441
Score = 46 (21.3 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 29/123 (23%), Positives = 56/123 (45%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF----ELI 413
GH+ V + S DG +A+ S D+++K+W G H V ++F L
Sbjct: 589 GHKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLKFVPKSHLF 648
Query: 414 YCF-------RYPSN-FYCVVDMS------CCMSLYSWSADSRLLLSGSKDSTLKVWDIR 459
+ ++ ++ F V + C+++ S S D ++S S D +L++W+ R
Sbjct: 649 FTAGKDRKIKQWDADKFEHVQTLEGHHQEIWCLAI-SPSGD--YVVSSSHDKSLRLWE-R 704
Query: 460 TQK 462
T++
Sbjct: 705 TRE 707
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 237 (88.5 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 60/206 (29%), Positives = 97/206 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GHT++V ++F G+ LAS S D T++LWD + GH + V +A +G
Sbjct: 145 TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG 204
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H+VS ++ ++ W+ QTG +GH++W+ + P N S S D
Sbjct: 205 DHIVSAARDKTIKMWEVQTGY-CVKTFTGHREWVRMV--RP---NQDGTLIASCSNDQTV 258
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKW--------------------GGDG-VIYTGSQDC 261
R+W V+ ++C L H V C+ W G G + +GS+D
Sbjct: 259 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSL 287
TIK+W+ + G + L GH +WV +
Sbjct: 319 TIKMWDVSTGMCLMTLVGHDNWVRGV 344
Score = 230 (86.0 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 78/272 (28%), Positives = 124/272 (45%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEY 293
LSGH VT V + V+ + S+D TIKVW+ G R LKGH V ++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 294 ALRTGAFDHTGK--QYSSPEEMKKAALERYN----KIKGNAPERLVSGSDDFTMFLWEPA 347
L + + D T K + E ++ +N I N + +VS + D T+ +WE
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNG-DHIVSAARDKTIKMWEVQ 222
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQ 407
KT TGH++ V V + DG +AS S D+++++W T + A R H
Sbjct: 223 TGYCVKT-FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHE----- 276
Query: 408 IRFELIYCFRY-PSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQD 466
++ C + P + Y + + LLSGS+D T+K+WD+ T
Sbjct: 277 ---HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 333
Query: 467 LPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L GH + V V + G+ + S D+ L++W
Sbjct: 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Score = 224 (83.9 bits), Expect = 8.4e-16, P = 8.4e-16
Identities = 65/223 (29%), Positives = 102/223 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GH V SVA P+G + S + D T+++W++ T + TGH+ WV + +
Sbjct: 184 CIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNA----------- 208
DG + S S ++ W T K L H+ + ISW P +
Sbjct: 244 QDGTLIASCSNDQTVRVWVVAT-KECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 209 ----PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
P +S S+D ++WDVS C++ L GH V V + G I + + D T+
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 264 KVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGK 305
+VW+ + ++ L H H+V SL T + TG+ D T K
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVK 405
Score = 194 (73.4 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 57/189 (30%), Positives = 87/189 (46%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T GH E V V + DG +AS S D TVR+W + T+ + H++ V CI+W+
Sbjct: 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWA 285
Query: 160 AD--------------------GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
+ G L+SGS+ ++ WD TG L GH W+ G+
Sbjct: 286 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT-LVGHDNWVRGV 344
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGS 258
+ H + +S + D R+WD ++C+ L+ H VT + + + TGS
Sbjct: 345 LF---HSGG--KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 259 QDCTIKVWE 267
D T+KVWE
Sbjct: 400 VDQTVKVWE 408
Score = 192 (72.6 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 55/190 (28%), Positives = 86/190 (45%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH V V F P + S S D T+++WD T GH + V I++ GK
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L S S ++ WD Q G + GH ++ ++ P N VSA++D +
Sbjct: 164 LLASCSADMTIKLWDFQ-GFECIRTMHGHDHNVSSVAIMP---NGD--HIVSAARDKTIK 217
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRELKGHGH 282
+W+V CV +GH V V+ DG + S D T++VW + EL+ H H
Sbjct: 218 MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 283 WVNSLALSTE 292
V ++ + E
Sbjct: 278 VVECISWAPE 287
Score = 164 (62.8 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 54/211 (25%), Positives = 97/211 (45%)
Query: 305 KQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQP-KTRMTGHQQLV 363
K+++S ++K +E +K+ A E SG + + + P K ++GH+ V
Sbjct: 53 KKWTSVIRLQKKVMELESKLN-EAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPV 111
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFE-----LIYCFRY 418
V F P + SAS D +IK+W+ TG F +GH V I F+ L C
Sbjct: 112 TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD 171
Query: 419 PS-------NFYCVVDM---SCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLP 468
+ F C+ M +S + + ++S ++D T+K+W+++T +
Sbjct: 172 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFT 231
Query: 469 GHADEVFAVDWSPDGEKVASGGKDRVLKLWM 499
GH + V V + DG +AS D+ +++W+
Sbjct: 232 GHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Score = 148 (57.2 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 45/184 (24%), Positives = 82/184 (44%)
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
+ +GH++ V + + +VS S+ ++ WD +TG L GH + IS++
Sbjct: 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-RTLKGHTDSVQDISFD- 159
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--GGDGVIYTGSQDC 261
H + S S D ++WD +C+ + GH V+ V GD ++ + ++D
Sbjct: 160 -HSG---KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIV-SAARDK 214
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAF-DHTGKQYSSPEEMKKAALER 320
TIK+WE G ++ GH WV + + + L D T + + + KA L
Sbjct: 215 TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 321 YNKI 324
+ +
Sbjct: 275 HEHV 278
Score = 74 (31.1 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 32/132 (24%), Positives = 58/132 (43%)
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
W P S + TG + + P G ++ S S DK+IK+W+ +TG + GH
Sbjct: 284 WAPESSYSSISEATGSETKKSG---KP-GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 404 PVYQIRFE-----LIYC--------FRYPSNFYCVVDMSC---CMSLYSWSADSRLLLSG 447
V + F ++ C + Y N C+ ++ ++ + + +++G
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDY-KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398
Query: 448 SKDSTLKVWDIR 459
S D T+KVW+ R
Sbjct: 399 SVDQTVKVWECR 410
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 225 (84.3 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 75/330 (22%), Positives = 142/330 (43%)
Query: 72 EKHKVSVEKVLS-IVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDT 130
+ K + LS I V RI+ R T+ GH + ++ + D R L S S D
Sbjct: 20 DARKACADATLSQITNNIDPVGRIQM--RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDG 77
Query: 131 TVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPS---GN 187
+ +WD T + +WV+ A++ G ++ G ++ +T + +
Sbjct: 78 KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSR 137
Query: 188 PLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVK 247
L+GH +++ + L+ + V++S D +WD+ + +GHT V +
Sbjct: 138 ELAGHTGYLSCCRF----LDD--NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLS 191
Query: 248 WGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGK 305
D ++ +G+ D + K+W+ +G + GH +N++ A TG+ D T +
Sbjct: 192 LAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCR 251
Query: 306 QYSSPEEMKKAALERYNKIKG-------NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTG 358
+ + + N I G + L++G DDF +W+ A+ + G
Sbjct: 252 LFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWD-ALKADRAGVLAG 310
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
H V+ + + DG VA+ S+D +K+WN
Sbjct: 311 HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 177 (67.4 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 70/271 (25%), Positives = 112/271 (41%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT-GKPSGNPLSGHKKWITGISWEPVHL 206
GH + + W D + LVS S+ G+L WD T K PL W+ ++ P
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAYAPSGN 110
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGVIYTGSQDCT 262
C D I+++ R+ + +S GHT ++C ++ D I T S D T
Sbjct: 111 YVAC-----GGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT 165
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPEEMKKAALERY 321
+W+ G+ GH V SL+L+ + L +GA D + K + E M + +
Sbjct: 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225
Query: 322 ----NKI----KGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV---NHVYFSP 370
N I GNA +GSDD T L++ ++ T H ++ V FS
Sbjct: 226 ESDINAICFFPNGNA---FATGSDDATCRLFDLRADQELMTY--SHDNIICGITSVSFSK 280
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
G+ + + D + +W+ V GH
Sbjct: 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGH 311
Score = 138 (53.6 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 55/224 (24%), Positives = 90/224 (40%)
Query: 236 LSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL--STE 292
L GH + + WG D ++ + SQD + +W++ + + WV + A S
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA----------PERLVSGSDDFTMF 342
Y + G D+ Y+ + R ++ G+ ++V+ S D T
Sbjct: 111 Y-VACGGLDNICSIYNLKTREGNVRVSR--ELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
LW+ +Q T TGH V + +PD + S + D S KLW+ G F GH
Sbjct: 168 LWDIETGQQTTT-FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE 226
Query: 403 GPVYQIRFELIYCFRYPSN--FYCVVDMSCCMSLYSWSADSRLL 444
+ I CF +P+ F D + C L+ AD L+
Sbjct: 227 SDINAI------CF-FPNGNAFATGSDDATCR-LFDLRADQELM 262
Score = 120 (47.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 432 MSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGK 491
MSL S + D+RL +SG+ D++ K+WD+R +Q GH ++ A+ + P+G A+G
Sbjct: 188 MSL-SLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSD 246
Query: 492 DRVLKLW 498
D +L+
Sbjct: 247 DATCRLF 253
Score = 106 (42.4 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 25/69 (36%), Positives = 34/69 (49%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
C ++ S+S RLLL+G D VWD L GH + V + + DG VA+G
Sbjct: 271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 490 GKDRVLKLW 498
D LK+W
Sbjct: 331 SWDSFLKIW 339
Score = 105 (42.0 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 23/71 (32%), Positives = 34/71 (47%)
Query: 428 MSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 487
+SCC L D +++ S D+T +WDI T + GH +V ++ +PD
Sbjct: 146 LSCCRFL-----DDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFV 200
Query: 488 SGGKDRVLKLW 498
SG D KLW
Sbjct: 201 SGACDASAKLW 211
Score = 62 (26.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 345 EPAVSKQPKTRMT--GHQQLVNHVYFSPDGQWVASASFDKSIKLWNG-TTGKFVAV 397
+P Q +TR T GH + +++ D + + SAS D + +W+ TT K A+
Sbjct: 38 DPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAI 93
Score = 44 (20.5 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 440 DSRLLLSGSKDSTLKVWD 457
D + +GS DS LK+W+
Sbjct: 323 DGMAVATGSWDSFLKIWN 340
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 225 (84.3 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 75/330 (22%), Positives = 142/330 (43%)
Query: 72 EKHKVSVEKVLS-IVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDT 130
+ K + LS I V RI+ R T+ GH + ++ + D R L S S D
Sbjct: 20 DARKACADATLSQITNNIDPVGRIQM--RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDG 77
Query: 131 TVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPS---GN 187
+ +WD T + +WV+ A++ G ++ G ++ +T + +
Sbjct: 78 KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSR 137
Query: 188 PLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVK 247
L+GH +++ + L+ + V++S D +WD+ + +GHT V +
Sbjct: 138 ELAGHTGYLSCCRF----LDD--NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLS 191
Query: 248 WGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGK 305
D ++ +G+ D + K+W+ +G + GH +N++ A TG+ D T +
Sbjct: 192 LAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCR 251
Query: 306 QYSSPEEMKKAALERYNKIKG-------NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTG 358
+ + + N I G + L++G DDF +W+ A+ + G
Sbjct: 252 LFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWD-ALKADRAGVLAG 310
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
H V+ + + DG VA+ S+D +K+WN
Sbjct: 311 HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 177 (67.4 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 70/271 (25%), Positives = 112/271 (41%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT-GKPSGNPLSGHKKWITGISWEPVHL 206
GH + + W D + LVS S+ G+L WD T K PL W+ ++ P
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAYAPSGN 110
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGVIYTGSQDCT 262
C D I+++ R+ + +S GHT ++C ++ D I T S D T
Sbjct: 111 YVAC-----GGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT 165
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPEEMKKAALERY 321
+W+ G+ GH V SL+L+ + L +GA D + K + E M + +
Sbjct: 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225
Query: 322 ----NKI----KGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV---NHVYFSP 370
N I GNA +GSDD T L++ ++ T H ++ V FS
Sbjct: 226 ESDINAICFFPNGNA---FATGSDDATCRLFDLRADQELMTY--SHDNIICGITSVSFSK 280
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
G+ + + D + +W+ V GH
Sbjct: 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGH 311
Score = 138 (53.6 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 55/224 (24%), Positives = 90/224 (40%)
Query: 236 LSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL--STE 292
L GH + + WG D ++ + SQD + +W++ + + WV + A S
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA----------PERLVSGSDDFTMF 342
Y + G D+ Y+ + R ++ G+ ++V+ S D T
Sbjct: 111 Y-VACGGLDNICSIYNLKTREGNVRVSR--ELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
LW+ +Q T TGH V + +PD + S + D S KLW+ G F GH
Sbjct: 168 LWDIETGQQTTT-FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE 226
Query: 403 GPVYQIRFELIYCFRYPSN--FYCVVDMSCCMSLYSWSADSRLL 444
+ I CF +P+ F D + C L+ AD L+
Sbjct: 227 SDINAI------CF-FPNGNAFATGSDDATCR-LFDLRADQELM 262
Score = 120 (47.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 432 MSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGK 491
MSL S + D+RL +SG+ D++ K+WD+R +Q GH ++ A+ + P+G A+G
Sbjct: 188 MSL-SLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSD 246
Query: 492 DRVLKLW 498
D +L+
Sbjct: 247 DATCRLF 253
Score = 106 (42.4 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 25/69 (36%), Positives = 34/69 (49%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
C ++ S+S RLLL+G D VWD L GH + V + + DG VA+G
Sbjct: 271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 490 GKDRVLKLW 498
D LK+W
Sbjct: 331 SWDSFLKIW 339
Score = 105 (42.0 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 23/71 (32%), Positives = 34/71 (47%)
Query: 428 MSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 487
+SCC L D +++ S D+T +WDI T + GH +V ++ +PD
Sbjct: 146 LSCCRFL-----DDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFV 200
Query: 488 SGGKDRVLKLW 498
SG D KLW
Sbjct: 201 SGACDASAKLW 211
Score = 62 (26.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 345 EPAVSKQPKTRMT--GHQQLVNHVYFSPDGQWVASASFDKSIKLWNG-TTGKFVAV 397
+P Q +TR T GH + +++ D + + SAS D + +W+ TT K A+
Sbjct: 38 DPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAI 93
Score = 44 (20.5 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 440 DSRLLLSGSKDSTLKVWD 457
D + +GS DS LK+W+
Sbjct: 323 DGMAVATGSWDSFLKIWN 340
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 225 (84.3 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 75/330 (22%), Positives = 142/330 (43%)
Query: 72 EKHKVSVEKVLS-IVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDT 130
+ K + LS I V RI+ R T+ GH + ++ + D R L S S D
Sbjct: 20 DARKACADATLSQITNNIDPVGRIQM--RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDG 77
Query: 131 TVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPS---GN 187
+ +WD T + +WV+ A++ G ++ G ++ +T + +
Sbjct: 78 KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSR 137
Query: 188 PLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVK 247
L+GH +++ + L+ + V++S D +WD+ + +GHT V +
Sbjct: 138 ELAGHTGYLSCCRF----LDD--NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLS 191
Query: 248 WGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGK 305
D ++ +G+ D + K+W+ +G + GH +N++ A TG+ D T +
Sbjct: 192 LAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCR 251
Query: 306 QYSSPEEMKKAALERYNKIKG-------NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTG 358
+ + + N I G + L++G DDF +W+ A+ + G
Sbjct: 252 LFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWD-ALKADRAGVLAG 310
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
H V+ + + DG VA+ S+D +K+WN
Sbjct: 311 HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 177 (67.4 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 70/271 (25%), Positives = 112/271 (41%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT-GKPSGNPLSGHKKWITGISWEPVHL 206
GH + + W D + LVS S+ G+L WD T K PL W+ ++ P
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAYAPSGN 110
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGVIYTGSQDCT 262
C D I+++ R+ + +S GHT ++C ++ D I T S D T
Sbjct: 111 YVAC-----GGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT 165
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPEEMKKAALERY 321
+W+ G+ GH V SL+L+ + L +GA D + K + E M + +
Sbjct: 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225
Query: 322 ----NKI----KGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV---NHVYFSP 370
N I GNA +GSDD T L++ ++ T H ++ V FS
Sbjct: 226 ESDINAICFFPNGNA---FATGSDDATCRLFDLRADQELMTY--SHDNIICGITSVSFSK 280
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
G+ + + D + +W+ V GH
Sbjct: 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGH 311
Score = 138 (53.6 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 55/224 (24%), Positives = 90/224 (40%)
Query: 236 LSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL--STE 292
L GH + + WG D ++ + SQD + +W++ + + WV + A S
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA----------PERLVSGSDDFTMF 342
Y + G D+ Y+ + R ++ G+ ++V+ S D T
Sbjct: 111 Y-VACGGLDNICSIYNLKTREGNVRVSR--ELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
LW+ +Q T TGH V + +PD + S + D S KLW+ G F GH
Sbjct: 168 LWDIETGQQTTT-FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE 226
Query: 403 GPVYQIRFELIYCFRYPSN--FYCVVDMSCCMSLYSWSADSRLL 444
+ I CF +P+ F D + C L+ AD L+
Sbjct: 227 SDINAI------CF-FPNGNAFATGSDDATCR-LFDLRADQELM 262
Score = 120 (47.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 432 MSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGK 491
MSL S + D+RL +SG+ D++ K+WD+R +Q GH ++ A+ + P+G A+G
Sbjct: 188 MSL-SLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSD 246
Query: 492 DRVLKLW 498
D +L+
Sbjct: 247 DATCRLF 253
Score = 106 (42.4 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 25/69 (36%), Positives = 34/69 (49%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
C ++ S+S RLLL+G D VWD L GH + V + + DG VA+G
Sbjct: 271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 490 GKDRVLKLW 498
D LK+W
Sbjct: 331 SWDSFLKIW 339
Score = 105 (42.0 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 23/71 (32%), Positives = 34/71 (47%)
Query: 428 MSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 487
+SCC L D +++ S D+T +WDI T + GH +V ++ +PD
Sbjct: 146 LSCCRFL-----DDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFV 200
Query: 488 SGGKDRVLKLW 498
SG D KLW
Sbjct: 201 SGACDASAKLW 211
Score = 62 (26.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 345 EPAVSKQPKTRMT--GHQQLVNHVYFSPDGQWVASASFDKSIKLWNG-TTGKFVAV 397
+P Q +TR T GH + +++ D + + SAS D + +W+ TT K A+
Sbjct: 38 DPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAI 93
Score = 44 (20.5 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 440 DSRLLLSGSKDSTLKVWD 457
D + +GS DS LK+W+
Sbjct: 323 DGMAVATGSWDSFLKIWN 340
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 225 (84.3 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 75/330 (22%), Positives = 142/330 (43%)
Query: 72 EKHKVSVEKVLS-IVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDT 130
+ K + LS I V RI+ R T+ GH + ++ + D R L S S D
Sbjct: 20 DARKACADATLSQITNNIDPVGRIQM--RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDG 77
Query: 131 TVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPS---GN 187
+ +WD T + +WV+ A++ G ++ G ++ +T + +
Sbjct: 78 KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSR 137
Query: 188 PLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVK 247
L+GH +++ + L+ + V++S D +WD+ + +GHT V +
Sbjct: 138 ELAGHTGYLSCCRF----LDD--NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLS 191
Query: 248 WGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGK 305
D ++ +G+ D + K+W+ +G + GH +N++ A TG+ D T +
Sbjct: 192 LAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCR 251
Query: 306 QYSSPEEMKKAALERYNKIKG-------NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTG 358
+ + + N I G + L++G DDF +W+ A+ + G
Sbjct: 252 LFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWD-ALKADRAGVLAG 310
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
H V+ + + DG VA+ S+D +K+WN
Sbjct: 311 HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 177 (67.4 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 70/271 (25%), Positives = 112/271 (41%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT-GKPSGNPLSGHKKWITGISWEPVHL 206
GH + + W D + LVS S+ G+L WD T K PL W+ ++ P
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAYAPSGN 110
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGVIYTGSQDCT 262
C D I+++ R+ + +S GHT ++C ++ D I T S D T
Sbjct: 111 YVAC-----GGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT 165
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPEEMKKAALERY 321
+W+ G+ GH V SL+L+ + L +GA D + K + E M + +
Sbjct: 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225
Query: 322 ----NKI----KGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV---NHVYFSP 370
N I GNA +GSDD T L++ ++ T H ++ V FS
Sbjct: 226 ESDINAICFFPNGNA---FATGSDDATCRLFDLRADQELMTY--SHDNIICGITSVSFSK 280
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
G+ + + D + +W+ V GH
Sbjct: 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGH 311
Score = 138 (53.6 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 55/224 (24%), Positives = 90/224 (40%)
Query: 236 LSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL--STE 292
L GH + + WG D ++ + SQD + +W++ + + WV + A S
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA----------PERLVSGSDDFTMF 342
Y + G D+ Y+ + R ++ G+ ++V+ S D T
Sbjct: 111 Y-VACGGLDNICSIYNLKTREGNVRVSR--ELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
LW+ +Q T TGH V + +PD + S + D S KLW+ G F GH
Sbjct: 168 LWDIETGQQTTT-FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE 226
Query: 403 GPVYQIRFELIYCFRYPSN--FYCVVDMSCCMSLYSWSADSRLL 444
+ I CF +P+ F D + C L+ AD L+
Sbjct: 227 SDINAI------CF-FPNGNAFATGSDDATCR-LFDLRADQELM 262
Score = 120 (47.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 432 MSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGK 491
MSL S + D+RL +SG+ D++ K+WD+R +Q GH ++ A+ + P+G A+G
Sbjct: 188 MSL-SLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSD 246
Query: 492 DRVLKLW 498
D +L+
Sbjct: 247 DATCRLF 253
Score = 106 (42.4 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 25/69 (36%), Positives = 34/69 (49%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
C ++ S+S RLLL+G D VWD L GH + V + + DG VA+G
Sbjct: 271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 490 GKDRVLKLW 498
D LK+W
Sbjct: 331 SWDSFLKIW 339
Score = 105 (42.0 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 23/71 (32%), Positives = 34/71 (47%)
Query: 428 MSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 487
+SCC L D +++ S D+T +WDI T + GH +V ++ +PD
Sbjct: 146 LSCCRFL-----DDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFV 200
Query: 488 SGGKDRVLKLW 498
SG D KLW
Sbjct: 201 SGACDASAKLW 211
Score = 62 (26.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 345 EPAVSKQPKTRMT--GHQQLVNHVYFSPDGQWVASASFDKSIKLWNG-TTGKFVAV 397
+P Q +TR T GH + +++ D + + SAS D + +W+ TT K A+
Sbjct: 38 DPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAI 93
Score = 44 (20.5 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 440 DSRLLLSGSKDSTLKVWD 457
D + +GS DS LK+W+
Sbjct: 323 DGMAVATGSWDSFLKIWN 340
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 225 (84.3 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 75/330 (22%), Positives = 142/330 (43%)
Query: 72 EKHKVSVEKVLS-IVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDT 130
+ K + LS I V RI+ R T+ GH + ++ + D R L S S D
Sbjct: 20 DARKACADATLSQITNNIDPVGRIQM--RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDG 77
Query: 131 TVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPS---GN 187
+ +WD T + +WV+ A++ G ++ G ++ +T + +
Sbjct: 78 KLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSR 137
Query: 188 PLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVK 247
L+GH +++ + L+ + V++S D +WD+ + +GHT V +
Sbjct: 138 ELAGHTGYLSCCRF----LDD--NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLS 191
Query: 248 WGGDGVIY-TGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGK 305
D ++ +G+ D + K+W+ +G + GH +N++ A TG+ D T +
Sbjct: 192 LAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCR 251
Query: 306 QYSSPEEMKKAALERYNKIKG-------NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTG 358
+ + + N I G + L++G DDF +W+ A+ + G
Sbjct: 252 LFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWD-ALKADRAGVLAG 310
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
H V+ + + DG VA+ S+D +K+WN
Sbjct: 311 HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 177 (67.4 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 70/271 (25%), Positives = 112/271 (41%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT-GKPSGNPLSGHKKWITGISWEPVHL 206
GH + + W D + LVS S+ G+L WD T K PL W+ ++ P
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAYAPSGN 110
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGVIYTGSQDCT 262
C D I+++ R+ + +S GHT ++C ++ D I T S D T
Sbjct: 111 YVAC-----GGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT 165
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPEEMKKAALERY 321
+W+ G+ GH V SL+L+ + L +GA D + K + E M + +
Sbjct: 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225
Query: 322 ----NKI----KGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV---NHVYFSP 370
N I GNA +GSDD T L++ ++ T H ++ V FS
Sbjct: 226 ESDINAICFFPNGNA---FATGSDDATCRLFDLRADQELMTY--SHDNIICGITSVSFSK 280
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
G+ + + D + +W+ V GH
Sbjct: 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGH 311
Score = 138 (53.6 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 55/224 (24%), Positives = 90/224 (40%)
Query: 236 LSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL--STE 292
L GH + + WG D ++ + SQD + +W++ + + WV + A S
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA----------PERLVSGSDDFTMF 342
Y + G D+ Y+ + R ++ G+ ++V+ S D T
Sbjct: 111 Y-VACGGLDNICSIYNLKTREGNVRVSR--ELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
LW+ +Q T TGH V + +PD + S + D S KLW+ G F GH
Sbjct: 168 LWDIETGQQTTT-FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE 226
Query: 403 GPVYQIRFELIYCFRYPSN--FYCVVDMSCCMSLYSWSADSRLL 444
+ I CF +P+ F D + C L+ AD L+
Sbjct: 227 SDINAI------CF-FPNGNAFATGSDDATCR-LFDLRADQELM 262
Score = 120 (47.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 432 MSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGK 491
MSL S + D+RL +SG+ D++ K+WD+R +Q GH ++ A+ + P+G A+G
Sbjct: 188 MSL-SLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSD 246
Query: 492 DRVLKLW 498
D +L+
Sbjct: 247 DATCRLF 253
Score = 106 (42.4 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 25/69 (36%), Positives = 34/69 (49%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
C ++ S+S RLLL+G D VWD L GH + V + + DG VA+G
Sbjct: 271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 490 GKDRVLKLW 498
D LK+W
Sbjct: 331 SWDSFLKIW 339
Score = 105 (42.0 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 23/71 (32%), Positives = 34/71 (47%)
Query: 428 MSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 487
+SCC L D +++ S D+T +WDI T + GH +V ++ +PD
Sbjct: 146 LSCCRFL-----DDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFV 200
Query: 488 SGGKDRVLKLW 498
SG D KLW
Sbjct: 201 SGACDASAKLW 211
Score = 62 (26.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 345 EPAVSKQPKTRMT--GHQQLVNHVYFSPDGQWVASASFDKSIKLWNG-TTGKFVAV 397
+P Q +TR T GH + +++ D + + SAS D + +W+ TT K A+
Sbjct: 38 DPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAI 93
Score = 44 (20.5 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 440 DSRLLLSGSKDSTLKVWD 457
D + +GS DS LK+W+
Sbjct: 323 DGMAVATGSWDSFLKIWN 340
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 225 (84.3 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 72/316 (22%), Positives = 136/316 (43%)
Query: 89 QAVFRIRPVNRCSA----TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMF 144
Q I PV R T+ GH + ++ + D R L S S D + +WD T +
Sbjct: 32 QITANIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVH 91
Query: 145 KCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPS---GNPLSGHKKWITGISW 201
+WV+ A++ G ++ G ++ +T + + L+GH +++ +
Sbjct: 92 AIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF 151
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQD 260
L+ + V++S D +WD+ + +GHT V + D ++ +G+ D
Sbjct: 152 ----LDD--NQIVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACD 205
Query: 261 CTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALE 319
+ K+W+ +G + GH +N++ A TG+ D T + + + +
Sbjct: 206 ASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYS 265
Query: 320 RYNKIKG-------NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
N I G + L++G DDF +W+ A+ + GH V+ + + DG
Sbjct: 266 HDNIICGITSVAFSKSGRLLLAGYDDFNCNVWD-ALKADRAGVLAGHDNRVSCLGVTDDG 324
Query: 373 QWVASASFDKSIKLWN 388
VA+ S+D +K+WN
Sbjct: 325 MAVATGSWDSFLKIWN 340
Score = 175 (66.7 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 69/271 (25%), Positives = 112/271 (41%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT-GKPSGNPLSGHKKWITGISWEPVHL 206
GH + + W D + LVS S+ G+L WD T K PL W+ ++ P
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAYAPSGN 110
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGVIYTGSQDCT 262
C D I+++ R+ + +S GHT ++C ++ D I T S D T
Sbjct: 111 YVAC-----GGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT 165
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPEEMKKAALERY 321
+W+ G+ GH V SL+L+ + L +GA D + K + E M + +
Sbjct: 166 CALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225
Query: 322 ----NKI----KGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV---NHVYFSP 370
N I GNA +GSDD T L++ ++ + H ++ V FS
Sbjct: 226 ESDINAICFFPNGNA---FATGSDDATCRLFDLRADQE--LMVYSHDNIICGITSVAFSK 280
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
G+ + + D + +W+ V GH
Sbjct: 281 SGRLLLAGYDDFNCNVWDALKADRAGVLAGH 311
Score = 134 (52.2 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 54/225 (24%), Positives = 90/225 (40%)
Query: 236 LSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL--STE 292
L GH + + WG D ++ + SQD + +W++ + + WV + A S
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA----------PERLVSGSDDFTMF 342
Y + G D+ Y+ + R ++ G+ ++V+ S D T
Sbjct: 111 Y-VACGGLDNICSIYNLKTREGNVRVSR--ELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
LW+ +Q T GH V + +PD + S + D S KLW+ G F GH
Sbjct: 168 LWDIETGQQTTT-FAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE 226
Query: 403 GPVYQIRFELIYCFRYPSN--FYCVVDMSCCMSLYSWSADSRLLL 445
+ I CF +P+ F D + C L+ AD L++
Sbjct: 227 SDINAI------CF-FPNGNAFATGSDDATCR-LFDLRADQELMV 263
Score = 120 (47.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 432 MSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGK 491
MSL S + D+RL +SG+ D++ K+WD+R +Q GH ++ A+ + P+G A+G
Sbjct: 188 MSL-SLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSD 246
Query: 492 DRVLKLW 498
D +L+
Sbjct: 247 DATCRLF 253
Score = 105 (42.0 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 23/71 (32%), Positives = 34/71 (47%)
Query: 428 MSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 487
+SCC L D +++ S D+T +WDI T + GH +V ++ +PD
Sbjct: 146 LSCCRFL-----DDNQIVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFV 200
Query: 488 SGGKDRVLKLW 498
SG D KLW
Sbjct: 201 SGACDASAKLW 211
Score = 103 (41.3 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 24/69 (34%), Positives = 34/69 (49%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
C ++ ++S RLLL+G D VWD L GH + V + + DG VA+G
Sbjct: 271 CGITSVAFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 490 GKDRVLKLW 498
D LK+W
Sbjct: 331 SWDSFLKIW 339
Score = 62 (26.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 345 EPAVSKQPKTRMT--GHQQLVNHVYFSPDGQWVASASFDKSIKLWNG-TTGKFVAV 397
+P Q +TR T GH + +++ D + + SAS D + +W+ TT K A+
Sbjct: 38 DPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAI 93
Score = 44 (20.5 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 440 DSRLLLSGSKDSTLKVWD 457
D + +GS DS LK+W+
Sbjct: 323 DGMAVATGSWDSFLKIWN 340
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 240 (89.5 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 82/315 (26%), Positives = 141/315 (44%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
+R +N + I G + FSP+ + LA+ +LW + + GH V
Sbjct: 217 LRSLNNFCSQI-GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNV 275
Query: 154 LCIAW------SADGK--HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
I + S D K +L S + G ++ W + +P + + GH + ++W H
Sbjct: 276 GAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVAD-IEGHTVRVARVTW---H 331
Query: 206 LNAPCRRFVSAS-KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTI 263
P RF+ + D R+WD+ ++ ++ GH++ V + + DG + TG D
Sbjct: 332 ---PSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFG 388
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQ---------YSSPEEM 313
+VW+ G+ I L+GH + + S Y + TG+ D+T K Y+ P
Sbjct: 389 RVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ 448
Query: 314 KKAALERYNKIKGNAPERLVSGSDDFTMFLW-EPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
++ I GN L++G+ D T +W P S P + GH+ V + S DG
Sbjct: 449 NLVTGVKFEPIHGNF---LLTGAYDNTAKIWTHPGWS--PLKTLAGHEGKVMGLDISSDG 503
Query: 373 QWVASASFDKSIKLW 387
Q +A+ S+D++ KLW
Sbjct: 504 QLIATCSYDRTFKLW 518
Score = 147 (56.8 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 50/183 (27%), Positives = 82/183 (44%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L S + D ++ LW S +P + GH V V + P G+++ + +D+S +LW+
Sbjct: 295 LASCAADGSVKLWS-LDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEA 353
Query: 392 GKFVAVFRGHVGPVYQIRFELIYCFRYPSN---FYCVVDMS---CCMSL-------Y--S 436
+ + GH VY I F F V D+ C M L Y +
Sbjct: 354 QEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGIN 413
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSP-DGEKVASGGKDRVL 495
+S + + +GS D+T KVWD+R ++ +P H + V V + P G + +G D
Sbjct: 414 FSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTA 473
Query: 496 KLW 498
K+W
Sbjct: 474 KIW 476
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ +R RC + GH + + + FSP+G +A+GSGD T ++WDL + ++ H+
Sbjct: 390 VWDLR-TGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ 448
Query: 151 NWVLCIAWSA-DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAP 209
N V + + G L++G+ + W P L+GH+ + G+ +++
Sbjct: 449 NLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPL-KTLAGHEGKVMGLD-----ISSD 502
Query: 210 CRRFVSASKDGDARIW 225
+ + S D ++W
Sbjct: 503 GQLIATCSYDRTFKLW 518
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 47/173 (27%), Positives = 74/173 (42%)
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
LW+ +++ GH V + F DG + D ++W+ TG+ + GH+
Sbjct: 348 LWD-LEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHL 406
Query: 403 GPVYQIRFELI-YCFRYPS-NFYCVV-DMSCCMSLYSWSADSRL-------------LLS 446
+Y I F Y S + C V D+ +Y+ A L LL+
Sbjct: 407 KEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLT 466
Query: 447 GSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLWM 499
G+ D+T K+W + L GH +V +D S DG+ +A+ DR KLWM
Sbjct: 467 GAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWM 519
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 241 (89.9 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 76/278 (27%), Positives = 130/278 (46%)
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKK----WITGISWEPV 204
H + V C+ +S DGK+L +G Q +D TGK + +K +I + + P
Sbjct: 280 HNSVVCCVNFSNDGKYLATGCNRSA-QIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSP- 337
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTI 263
+ ++D ++WD+ +K GH L + + + DG I +GS D
Sbjct: 338 ----DGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKA 393
Query: 264 KVWETTQGK----LIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPE----EMK 314
K+W+ +GK L E G + V S+A+S + L G+ D+ + + + E
Sbjct: 394 KIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERY 453
Query: 315 KAALER-YNKIKGNAPERLVSGSDDFTMFLWEPAVSK-QPKTRMT--GHQQLVNHVYFSP 370
+ L+ Y+ + L SGS D ++ LW+ + S+ + + R T GH+ V V FSP
Sbjct: 454 EGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSP 513
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
DG W+ S S D+S++ W+ G + +GH V +
Sbjct: 514 DGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISV 551
Score = 237 (88.5 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 71/252 (28%), Positives = 121/252 (48%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
+ SV FSPDG LA+G+ D TV++WD++T+ GH+ + + +S+DG+ +VSGS
Sbjct: 330 IRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSG 389
Query: 171 AGELQCWDPQTGKPS---GNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDV 227
+ + WD + GK + GN G K +T ++ P R + S D R+WD
Sbjct: 390 DKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSP-----DGRLVAAGSLDNIVRLWDA 444
Query: 228 SLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETT----QGKLIRELKGHGH 282
+ GH +V V + DG + +GS D ++K+W+ + + + GH
Sbjct: 445 QTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKD 504
Query: 283 WVNSLALSTEYA-LRTGAFDHT--------GKQYSSPEEMKKAALERYNKIKGNAPERLV 333
+V S+A S + + L +G+ D + G + + K + + K N+
Sbjct: 505 FVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFA 564
Query: 334 SGSDDFTMFLWE 345
+GS DF LW+
Sbjct: 565 TGSGDFRSRLWK 576
Score = 224 (83.9 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 81/304 (26%), Positives = 140/304 (46%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT--QTPMFKCTGHKN---WVLCIAWSAD 161
H V V FS DG+ LA+G + + +++D++T + F K+ ++ + +S D
Sbjct: 280 HNSVVCCVNFSNDGKYLATGC-NRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPD 338
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
G +L +G++ ++ WD T K + GH+ I + + ++ R VS S D
Sbjct: 339 GNYLATGAEDKTVKVWDIHTKKIQ-HTFYGHELDIYSLDY-----SSDGRFIVSGSGDKK 392
Query: 222 ARIWDVSLRKCVICLSGHTLA----VTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRE 276
A+IWD+ KC L + VT V DG ++ GS D +++W+ G +
Sbjct: 393 AKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLER 452
Query: 277 LKGHGHWVNSLALSTE-YALRTGAFDHTGKQYS-SPEEMKKAALERYNKIK------GNA 328
+GH V S+A S + +L +G+ D + K + S + +N K +
Sbjct: 453 YEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFS 512
Query: 329 PER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSP--DGQWV-ASASFDKS 383
P+ L+SGS D ++ W+P + + GH+ V V SP + V A+ S D
Sbjct: 513 PDGSWLISGSKDRSVQFWDPR-NGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFR 571
Query: 384 IKLW 387
+LW
Sbjct: 572 SRLW 575
Score = 218 (81.8 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 60/197 (30%), Positives = 94/197 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC----TGHKNWVLCIAW 158
T GH + S+ +S DGR + SGSGD ++WD+ F G KN V +A
Sbjct: 364 TFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAM 423
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
S DG+ + +GS ++ WD QTG GH + +++ P + S S
Sbjct: 424 SPDGRLVAAGSLDNIVRLWDAQTGYFLER-YEGHLDSVYSVAFSP-----DGKSLASGSL 477
Query: 219 DGDARIWDVS----LRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKL 273
D ++WD+S +C +GH V V + DG + +GS+D +++ W+ G
Sbjct: 478 DKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTT 537
Query: 274 IRELKGHGHWVNSLALS 290
L+GH + V S+ALS
Sbjct: 538 HMMLQGHKNSVISVALS 554
Score = 217 (81.4 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 60/180 (33%), Positives = 85/180 (47%)
Query: 99 RCSATIA----GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
+C+ T+ G V SVA SPDGR +A+GS D VRLWD T + + GH + V
Sbjct: 402 KCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVY 461
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGN---PLSGHKKWITGISWEPVHLNAPCR 211
+A+S DGK L SGS L+ WD + +GHK ++ +++ P
Sbjct: 462 SVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSP-----DGS 516
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCV----KWGGDGVIYTGSQDCTIKVWE 267
+S SKD + WD + L GH +V V K GV TGS D ++W+
Sbjct: 517 WLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLWK 576
Score = 160 (61.4 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 36/82 (43%), Positives = 47/82 (57%)
Query: 95 RPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
R +RC AT GH + VLSVAFSPDG L SGS D +V+ WD T GHKN V+
Sbjct: 490 RSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVI 549
Query: 155 CIAWSA-DGKHLVSGSKAGELQ 175
+A S + H V + +G+ +
Sbjct: 550 SVALSPKNNSHGVFATGSGDFR 571
Score = 153 (58.9 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 50/186 (26%), Positives = 84/186 (45%)
Query: 239 HTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIR----ELKGHGH-WVNSLALSTE- 292
H V CV + DG + + ++++ GK + E + G ++ S+ S +
Sbjct: 280 HNSVVCCVNFSNDGKYLATGCNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPDG 339
Query: 293 YALRTGAFDHTGKQYS-SPEEMKKA----ALERYNKIKGNAPERLVSGSDDFTMFLWEPA 347
L TGA D T K + ++++ L+ Y+ + +VSGS D +W+
Sbjct: 340 NYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIE 399
Query: 348 VSKQPKT---RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGP 404
K T G + V V SPDG+ VA+ S D ++LW+ TG F+ + GH+
Sbjct: 400 KGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDS 459
Query: 405 VYQIRF 410
VY + F
Sbjct: 460 VYSVAF 465
Score = 148 (57.2 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 438 SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKL 497
S D RL+ +GS D+ +++WD +T + GH D V++V +SPDG+ +ASG D+ LKL
Sbjct: 424 SPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKL 483
Query: 498 W 498
W
Sbjct: 484 W 484
Score = 146 (56.5 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 24/62 (38%), Positives = 41/62 (66%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+S D L +G++D T+KVWDI T+K++ GH +++++D+S DG + SG D+ K
Sbjct: 335 FSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAK 394
Query: 497 LW 498
+W
Sbjct: 395 IW 396
Score = 131 (51.2 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 433 SLYS--WSADSRLLLSGSKDSTLKVWDI---RTQ-KLKQDLPGHADEVFAVDWSPDGEKV 486
S+YS +S D + L SGS D +LK+WD+ R++ + + GH D V +V +SPDG +
Sbjct: 459 SVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWL 518
Query: 487 ASGGKDRVLKLW 498
SG KDR ++ W
Sbjct: 519 ISGSKDRSVQFW 530
Score = 123 (48.4 bits), Expect = 0.00028, P = 0.00028
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 432 MSLYS--WSADSRLLLSGSKDSTLKVWDIRTQK----LKQDLPGHADEVFAVDWSPDGEK 485
+ +YS +S+D R ++SGS D K+WDI K L + G + V +V SPDG
Sbjct: 370 LDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRL 429
Query: 486 VASGGKDRVLKLW 498
VA+G D +++LW
Sbjct: 430 VAAGSLDNIVRLW 442
Score = 93 (37.8 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 23/66 (34%), Positives = 33/66 (50%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEK---VASGGKD 492
++S D L+SGSKD +++ WD R L GH + V +V SP A+G D
Sbjct: 510 AFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGD 569
Query: 493 RVLKLW 498
+LW
Sbjct: 570 FRSRLW 575
>UNIPROTKB|F1NC11 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:AADN02037856
EMBL:AADN02037857 EMBL:AADN02037858 EMBL:AADN02037859
EMBL:AADN02037860 IPI:IPI00583802 Ensembl:ENSGALT00000023879
Uniprot:F1NC11
Length = 938
Score = 187 (70.9 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 83/306 (27%), Positives = 138/306 (45%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC--TGHKNWVLCIAWSA 160
TI GH V ++AFS D + SG+ ++ V++W+ +T +C T + LC +
Sbjct: 405 TIGGHRSDVRTLAFSSDNIAVLSGAAES-VKIWNRST----LQCIRTMDCEYALCSLFVP 459
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP-----VHLNAP-CRRF- 213
+ ++ G+K G+LQ +D +G L+ H + I+ P V A C +F
Sbjct: 460 GDRQVIVGTKTGKLQLYDLASGTLM-ETLNAHDGAVWSIALSPDQRGFVTGGADKCVKFW 518
Query: 214 -VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQ-DCTIKVWETTQG 271
KD + +S+++ I V CV++ + + S DCT+KV+ T
Sbjct: 519 DFELVKDESSIQKRLSMKQVRILQLDED--VLCVRYSPNQKLLAVSLLDCTVKVFYTDTL 576
Query: 272 KLIRELKGHGHWVNSLALSTEYAL-RTGAFDHT----GKQYSSPEEMKKAALERYNKIKG 326
K L GH V + +S + AL TG+ D G + A + ++
Sbjct: 577 KFFLSLYGHKLPVLCMDISYDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLQF 636
Query: 327 NAPERL--VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSI 384
A L +G D+ + W+ + +T + GH Q V + SP+G +V SAS DKS+
Sbjct: 637 VAKSHLFFTAGKDN-KIKQWDADKFEHIQT-LEGHHQEVWCLALSPNGDYVVSASHDKSL 694
Query: 385 KLWNGT 390
+LW T
Sbjct: 695 RLWERT 700
Score = 173 (66.0 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 64/231 (27%), Positives = 100/231 (43%)
Query: 132 VRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSG 191
V +WD + G K+ C+ S DG HL G + G ++ + +G+ S +G
Sbjct: 47 VFVWDARKGEKVLILKGSKH-ESCLRPSPDGLHLAVGYEDGSIRIFSLLSGEASV-AFNG 104
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD 251
HK +T + ++ L R VS SKD D +WDV + L GH AVT V + +
Sbjct: 105 HKAAVTALQYD--QLGG---RLVSGSKDTDVIVWDVINESGLYRLKGHKDAVTQVLFLKE 159
Query: 252 -GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFDHTGKQYSS 309
++ T +D +K W+ + L GH V +AL S E L TG D + +
Sbjct: 160 KNLLVTSGKDTLVKWWDLDTQHCFKTLVGHRTEVWGMALVSEEKRLITGTADSELRVWDI 219
Query: 310 P--EEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTG 358
+E++ K KG++P +D T+ L E + K G
Sbjct: 220 TYIQELEDPDEPESKKSKGSSPGAEKDNEEDETLELDESPEERLLKCSKAG 270
Score = 160 (61.4 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 59/217 (27%), Positives = 93/217 (42%)
Query: 109 EAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSG 168
E VL V +SP+ + LA D TV+++ +T GHK VLC+ S DG + +G
Sbjct: 545 EDVLCVRYSPNQKLLAVSLLDCTVKVFYTDTLKFFLSLYGHKLPVLCMDISYDGALIATG 604
Query: 169 SKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVS 228
S ++ W G L H + + + A F +A KD + WD
Sbjct: 605 SADRNVKIWGLDFGD-CHRSLFAHDDSVMYLQFV-----AKSHLFFTAGKDNKIKQWDAD 658
Query: 229 LRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLI----RELKGHGHW 283
+ + L GH V C+ +G + + S D ++++WE T+ LI RE++ +
Sbjct: 659 KFEHIQTLEGHHQEVWCLALSPNGDYVVSASHDKSLRLWERTREPLILEEEREMQREAEY 718
Query: 284 VNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALER 320
S+A + + TG E KAA ER
Sbjct: 719 EESVAKEEQPVVAGETQGETGLAGKKTIETIKAA-ER 754
Score = 155 (59.6 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 65/229 (28%), Positives = 100/229 (43%)
Query: 117 SPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQC 176
SPDG LA G D ++R++ L + GHK V + + G LVSGSK ++
Sbjct: 73 SPDGLHLAVGYEDGSIRIFSLLSGEASVAFNGHKAAVTALQYDQLGGRLVSGSKDTDVIV 132
Query: 177 WDPQTGKPSG-NPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVIC 235
WD SG L GHK +T + + L V++ KD + WD+ + C
Sbjct: 133 WD--VINESGLYRLKGHKDAVTQV----LFLKEK-NLLVTSGKDTLVKWWDLDTQHCFKT 185
Query: 236 LSGHTLAVTCVKWGGDGV-----IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL- 289
L GH V WG V + TG+ D ++VW+ T I+EL+ + +
Sbjct: 186 LVGHRTEV----WGMALVSEEKRLITGTADSELRVWDITY---IQELEDPDEPESKKSKG 238
Query: 290 STEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDD 338
S+ A + D T + SPEE + + I +R+V+ + D
Sbjct: 239 SSPGAEKDNEEDETLELDESPEE-RLLKCSKAGSIMREGRDRVVTLATD 286
Score = 153 (58.9 bits), Expect = 5.5e-15, Sum P(2) = 5.5e-15
Identities = 40/149 (26%), Positives = 80/149 (53%)
Query: 82 LSIVYQPQAVFRIRPVNRCSATIA--GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNT 139
L++ Y+ ++ RI + A++A GH AV ++ + G +L SGS DT V +WD+
Sbjct: 79 LAVGYEDGSI-RIFSLLSGEASVAFNGHKAAVTALQYDQLGGRLVSGSKDTDVIVWDVIN 137
Query: 140 QTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI 199
++ +++ GHK+ V + + + LV+ K ++ WD T + L GH+ + G+
Sbjct: 138 ESGLYRLKGHKDAVTQVLFLKEKNLLVTSGKDTLVKWWDLDT-QHCFKTLVGHRTEVWGM 196
Query: 200 SWEPVHLNAPCRRFVSASKDGDARIWDVS 228
+ L + +R ++ + D + R+WD++
Sbjct: 197 A-----LVSEEKRLITGTADSELRVWDIT 220
Score = 122 (48.0 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 44/148 (29%), Positives = 69/148 (46%)
Query: 366 VYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVY--QIRFE--LIYCFRYPSN 421
V +SP+ + +A + D ++K++ T KF GH PV I ++ LI N
Sbjct: 550 VRYSPNQKLLAVSLLDCTVKVFYTDTLKFFLSLYGHKLPVLCMDISYDGALIATGSADRN 609
Query: 422 FYCV-VDMSCC-MSLYS---------WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGH 470
+D C SL++ + A S L + KD+ +K WD + Q L GH
Sbjct: 610 VKIWGLDFGDCHRSLFAHDDSVMYLQFVAKSHLFFTAGKDNKIKQWDADKFEHIQTLEGH 669
Query: 471 ADEVFAVDWSPDGEKVASGGKDRVLKLW 498
EV+ + SP+G+ V S D+ L+LW
Sbjct: 670 HQEVWCLALSPNGDYVVSASHDKSLRLW 697
Score = 105 (42.0 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 23/80 (28%), Positives = 41/80 (51%)
Query: 420 SNFYCVVDMSCCMSLYS-WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 478
S C+ M C +L S + R ++ G+K L+++D+ + L + L H V+++
Sbjct: 439 STLQCIRTMDCEYALCSLFVPGDRQVIVGTKTGKLQLYDLASGTLMETLNAHDGAVWSIA 498
Query: 479 WSPDGEKVASGGKDRVLKLW 498
SPD +GG D+ +K W
Sbjct: 499 LSPDQRGFVTGGADKCVKFW 518
Score = 54 (24.1 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 27/142 (19%), Positives = 49/142 (34%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+ +GS D + +W ++ + H V ++ F +A D IK W+
Sbjct: 601 IATGSADRNVKIWGLDFGDCHRS-LFAHDDSVMYLQFVAKSHLFFTAGKDNKIKQWDADK 659
Query: 392 GKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDS 451
+ + GH + ++C N VV S SL W L+ +
Sbjct: 660 FEHIQTLEGH--------HQEVWCLALSPNGDYVVSASHDKSLRLWERTREPLILEEERE 711
Query: 452 TLKVWDIRTQKLKQDLPGHADE 473
+ + K++ P A E
Sbjct: 712 MQREAEYEESVAKEEQPVVAGE 733
Score = 47 (21.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 469 GHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
GH +V + +S D V SG + V K+W
Sbjct: 408 GHRSDVRTLAFSSDNIAVLSGAAESV-KIW 436
Score = 46 (21.3 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 438 SADSRLLLSGSKDSTLKVWDIRTQK 462
S D R ++G D +K WD K
Sbjct: 500 SPDQRGFVTGGADKCVKFWDFELVK 524
>UNIPROTKB|B4P116 [details] [associations]
symbol:GE13328 "Ribosome biogenesis protein WDR12 homolog"
species:7245 "Drosophila yakuba" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CM000157 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029
EMBL:AY231921 RefSeq:XP_002088279.1 ProteinModelPortal:B4P116
STRING:B4P116 EnsemblMetazoa:FBtr0259846 GeneID:6527185
KEGG:dya:Dyak_GE13328 FlyBase:FBgn0068268 Uniprot:B4P116
Length = 420
Score = 160 (61.4 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 61/232 (26%), Positives = 100/232 (43%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQ----------------TPM 143
C + GH V SV+ SPDG + A+GS DT +++W + TP
Sbjct: 186 CVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVWSAEVEDAVEGSSKRMKESGVRTPK 245
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
GH+ V + W D L++GS L+ WD + +S +K I S+
Sbjct: 246 ITLQGHRESVSAVQWM-DASTLLTGSWDHTLKVWDLSL-EGIKTEISTNKS-IFDASYSK 302
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLS---GHTLAVTCVKWGG--DGVIYTGS 258
LN R ++AS D + R++D + + + GH V V W + + +G+
Sbjct: 303 --LN---RLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGA 357
Query: 259 QDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSS 309
D K+W+ K + +L GHG V + S + +G D+T + + S
Sbjct: 358 YDNQNKLWDCRSPKAPLYDLLGHGEKVLDIDWSNPKYIVSGGVDNTVRVFKS 409
Score = 148 (57.2 bits), Expect = 3.8e-17, Sum P(3) = 3.8e-17
Identities = 66/256 (25%), Positives = 103/256 (40%)
Query: 37 QLSQIVNKLLNNEE---KLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFR 93
+L+ VN LL ++ + F + D L L +L + +S E + I Y + F
Sbjct: 38 ELNTFVNALLRQKDGSSDTDFDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVER--FP 95
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
C H + V +V S G+ + SG D T+ LW N + +GH +
Sbjct: 96 APEPQDCLL----HDDWVSAVKAS--GKWILSGCYDNTLNLWT-NKGKHILTISGHTAPI 148
Query: 154 LCIAW-SADGK--HLVSGSKAGELQCWDPQTGKPSGNPLS---GHKKWITGISWEPVHLN 207
+ W S D + VS S+ W G S +S GH++ + +S P L
Sbjct: 149 KAVDWISLDEETGRFVSTSQDQTAMLWQWNVGSNSVECVSVCKGHERGVDSVSVSPDGL- 207
Query: 208 APCRRFVSASKDGDARIWDVSLRKCV----------------ICLSGHTLAVTCVKWGGD 251
RF + S D ++W + V I L GH +V+ V+W
Sbjct: 208 ----RFATGSWDTMLKVWSAEVEDAVEGSSKRMKESGVRTPKITLQGHRESVSAVQWMDA 263
Query: 252 GVIYTGSQDCTIKVWE 267
+ TGS D T+KVW+
Sbjct: 264 STLLTGSWDHTLKVWD 279
Score = 137 (53.3 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 56/229 (24%), Positives = 103/229 (44%)
Query: 280 HGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEM------KKAALERYNKIK-GNAPERL 332
H WV+++ S ++ L +G +D+T +++ + A ++ + I R
Sbjct: 105 HDDWVSAVKASGKWIL-SGCYDNTLNLWTNKGKHILTISGHTAPIKAVDWISLDEETGRF 163
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMT---GHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
VS S D T LW+ V ++ GH++ V+ V SPDG A+ S+D +K+W+
Sbjct: 164 VSTSQDQTAMLWQWNVGSNSVECVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVWSA 223
Query: 390 TTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSK 449
V G +++ + R P + +S W D+ LL+GS
Sbjct: 224 EVEDAVE------GSSKRMKESGV---RTPK--ITLQGHRESVSAVQWM-DASTLLTGSW 271
Query: 450 DSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
D TLKVWD+ + +K ++ + +F +S + + D+ L+L+
Sbjct: 272 DHTLKVWDLSLEGIKTEISTNKS-IFDASYSKLNRLILTASADKNLRLY 319
Score = 112 (44.5 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 50/207 (24%), Positives = 94/207 (45%)
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG- 250
H W++ + A + +S D +W + K ++ +SGHT + V W
Sbjct: 105 HDDWVSAVK-------ASGKWILSGCYDNTLNLW-TNKGKHILTISGHTAPIKAVDWISL 156
Query: 251 D---GVIYTGSQDCTIKVWETTQG----KLIRELKGHGHWVNSLALSTEYALR--TGAFD 301
D G + SQD T +W+ G + + KGH V+S+++S + LR TG++D
Sbjct: 157 DEETGRFVSTSQDQTAMLWQWNVGSNSVECVSVCKGHERGVDSVSVSPD-GLRFATGSWD 215
Query: 302 HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
K +S+ E++ A ++G++ SG + PK + GH++
Sbjct: 216 TMLKVWSA--EVEDA-------VEGSSKRMKESGV-------------RTPKITLQGHRE 253
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWN 388
V+ V + D + + S+D ++K+W+
Sbjct: 254 SVSAVQWM-DASTLLTGSWDHTLKVWD 279
Score = 109 (43.4 bits), Expect = 3.8e-17, Sum P(3) = 3.8e-17
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 437 WSADSRLL-LSGSKDSTLKVWDIRTQKLK-QDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
WS L +SG+ D+ K+WD R+ K DL GH ++V +DWS + + + SGG D
Sbjct: 345 WSTTEEFLFVSGAYDNQNKLWDCRSPKAPLYDLLGHGEKVLDIDWS-NPKYIVSGGVDNT 403
Query: 495 LKLW 498
++++
Sbjct: 404 VRVF 407
Score = 82 (33.9 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQK---LKQDLPGHADEVFAVDWSPDGEKV-ASGGK 491
S+S +RL+L+ S D L+++D RT + ++ GH V V WS E + SG
Sbjct: 299 SYSKLNRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAY 358
Query: 492 DRVLKLW 498
D KLW
Sbjct: 359 DNQNKLW 365
Score = 68 (29.0 bits), Expect = 3.8e-17, Sum P(3) = 3.8e-17
Identities = 24/95 (25%), Positives = 50/95 (52%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L++GS D T+ +W+ ++ + KT ++ ++ + + Y S + + +AS DK+++L++ T
Sbjct: 266 LLTGSWDHTLKVWDLSL-EGIKTEISTNKSIFDASY-SKLNRLILTASADKNLRLYDPRT 323
Query: 392 --GKFVA-VFRGHVGPVYQIRFELIYCFRYPSNFY 423
G V + GH V + + F + S Y
Sbjct: 324 NQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAY 358
Score = 40 (19.1 bits), Expect = 4.0e-10, Sum P(3) = 4.0e-10
Identities = 8/23 (34%), Positives = 16/23 (69%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIR 459
WS + + ++SG D+T++V+ R
Sbjct: 389 WS-NPKYIVSGGVDNTVRVFKSR 410
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 233 (87.1 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 58/205 (28%), Positives = 98/205 (47%)
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSA 160
S HT V SV F DG+ + S D TV++W + Q +F + H NWV C +S
Sbjct: 58 STVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSP 117
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
DG+ +VS S ++ WD ++ + + H ++T + + P + C +A D
Sbjct: 118 DGRLIVSASDDKTVKLWD-KSSRECVHSYCEHGGFVTYVDFHP---SGTC--IAAAGMDN 171
Query: 221 DARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
++WDV + + H+ AV + + G + T S D T+K+ + +G+L+ L G
Sbjct: 172 TVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHG 231
Query: 280 HGHWVNSLALSTEYALRTGAFDHTG 304
H ++A S RTG + +G
Sbjct: 232 HQGPATTVAFS-----RTGEYFASG 251
Score = 232 (86.7 bits), Expect = 5.8e-17, P = 5.8e-17
Identities = 70/218 (32%), Positives = 101/218 (46%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ ++P +R + GH +AV V FSP G LASGS D TVR+W N + H
Sbjct: 7 VWHMKPQSR-AYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHT 65
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPC 210
V + + +DG+ V+ S ++ W K + LS H W+ + P
Sbjct: 66 ATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFS-LSQHINWVRCAKFSP-----DG 119
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETT 269
R VSAS D ++WD S R+CV H VT V + G I D T+KVW+
Sbjct: 120 RLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVR 179
Query: 270 QGKLIRELKGHGHWVNSLAL--STEYALRTGAFDHTGK 305
+L++ + H VN L+ S Y + T + D T K
Sbjct: 180 THRLLQHYQLHSAAVNGLSFHPSGNYLI-TASSDSTLK 216
Score = 228 (85.3 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 71/284 (25%), Positives = 123/284 (43%)
Query: 129 DTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNP 188
D+ + +W + Q+ ++ TGHK+ V C+ +S G L SGS+ ++ W P K
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNV-KGESTV 60
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW 248
H + VH + + FV+AS D ++W +K + LS H V C K+
Sbjct: 61 FRAHTATVRS-----VHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKF 115
Query: 249 GGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQ 306
DG +I + S D T+K+W+ + + + HG +V + + D+T K
Sbjct: 116 SPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKV 175
Query: 307 YSSPEEMKKAALERYNK-IKGNA--PER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
+ + ++ + G + P L++ S D T+ + + + T + GHQ
Sbjct: 176 WDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYT-LHGHQG 234
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
V FS G++ AS D+ + +W F V G V V
Sbjct: 235 PATTVAFSRTGEYFASGGSDEQVMVWKSN---FDIVDHGEVTKV 275
Score = 172 (65.6 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 52/177 (29%), Positives = 78/177 (44%)
Query: 338 DFTMFLWEPAVSKQPKT-RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVA 396
D + +W + Q + R TGH+ V V FSP G +AS S DK++++W
Sbjct: 2 DSCLMVWH--MKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGEST 59
Query: 397 VFRGHVGPVYQIRF-ELIYCFRYPSN-----FYCVVDMSCCMSL---YSW------SADS 441
VFR H V + F F S+ + SL +W S D
Sbjct: 60 VFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDG 119
Query: 442 RLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
RL++S S D T+K+WD +++ H V VD+ P G +A+ G D +K+W
Sbjct: 120 RLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 176
Score = 166 (63.5 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 56/185 (30%), Positives = 85/185 (45%)
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKT-RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
+ V+ SDD T+ +W A +Q ++ H V FSPDG+ + SAS DK++KLW+
Sbjct: 78 QSFVTASDDKTVKVW--ATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 135
Query: 389 GTTGKFVAVFRGHVGPVYQIRFELI-YCFRYPS--NFYCVVDM------------SCCMS 433
++ + V + H G V + F C N V D+ S ++
Sbjct: 136 KSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVN 195
Query: 434 LYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR 493
S+ L++ S DSTLK+ D+ +L L GH V +S GE ASGG D
Sbjct: 196 GLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDE 255
Query: 494 VLKLW 498
+ +W
Sbjct: 256 QVMVW 260
>UNIPROTKB|G4MXN3 [details] [associations]
symbol:MGG_01259 "Pre-mRNA splicing factor" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 KO:K12662 RefSeq:XP_003714171.1
ProteinModelPortal:G4MXN3 EnsemblFungi:MGG_01259T0 GeneID:2679643
KEGG:mgr:MGG_01259 Uniprot:G4MXN3
Length = 531
Score = 225 (84.3 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 74/248 (29%), Positives = 116/248 (46%)
Query: 68 GSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRCS--ATIAGHTEAVLSVAFSPDGRQLAS 125
G+ L++ VS E V + + +++ + AT++GHT+ V V F P GR LAS
Sbjct: 259 GATLQESNVSAESVNLATGGAEGQVNLWSLSQDTPLATLSGHTQRVCRVDFHPSGRFLAS 318
Query: 126 GSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKP- 184
S DT+ RLWD+ +T + GH V ++++ DG L S + + WD +TG+
Sbjct: 319 ASEDTSWRLWDVEKRTELLLQEGHSRGVFAVSFNGDGSLLASAGQDSIGRIWDLRTGRTI 378
Query: 185 ---SGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTL 241
G+ + GH K I + W + R +SAS DG + WDV + + HT
Sbjct: 379 MILDGH-MDGHIKPIYALDW-----GSDGHRVLSASADGWIKCWDVRKVQRTGGVGAHTS 432
Query: 242 AVTCVKW--GGDGVIYTG---SQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR 296
AV+ ++W G DG + G D + G + G H VN + + ++AL
Sbjct: 433 AVSDMRWFKGLDGPL-DGVPLGVDEKGQAMPKKSGTFLVS-SGFDHKVNIYS-ADDWALV 489
Query: 297 TGAFDHTG 304
HTG
Sbjct: 490 QSLSGHTG 497
Score = 200 (75.5 bits), Expect = 8.4e-13, P = 8.4e-13
Identities = 74/285 (25%), Positives = 121/285 (42%)
Query: 117 SPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQC 176
S + LA+G + V LW L+ TP+ +GH V + + G+ L S S+ +
Sbjct: 268 SAESVNLATGGAEGQVNLWSLSQDTPLATLSGHTQRVCRVDFHPSGRFLASASEDTSWRL 327
Query: 177 WDPQTGKPSGNPLS-GHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVIC 235
WD + K + L GH + + +S+ N SA +D RIWD+ + ++
Sbjct: 328 WDVE--KRTELLLQEGHSRGVFAVSF-----NGDGSLLASAGQDSIGRIWDLRTGRTIMI 380
Query: 236 LSGHT----LAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALS 290
L GH + + WG DG + + S D IK W+ + ++ G G ++++
Sbjct: 381 LDGHMDGHIKPIYALDWGSDGHRVLSASADGWIKCWDVRK---VQRTGGVGAHTSAVSDM 437
Query: 291 TEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSK 350
+ G D G E K A+ K G LVS D + ++ A
Sbjct: 438 RWFKGLDGPLD--GVPLGVDE--KGQAMP---KKSGTF---LVSSGFDHKVNIYS-ADDW 486
Query: 351 QPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
++GH V V S DG+W+ S D+++KLW G+ V
Sbjct: 487 ALVQSLSGHTGPVASVDVSRDGRWIVSGGHDRTVKLWGRNDGEGV 531
Score = 184 (69.8 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 58/201 (28%), Positives = 91/201 (45%)
Query: 117 SPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW-----------SADGKHL 165
SP+G +A+G+ V+L+ + GH N V + W SA+ +L
Sbjct: 215 SPNGETVATGNWGGQVKLFSIPNLDETMNLRGHTNKVSGMCWFPGATLQESNVSAESVNL 274
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV-SASKDGDARI 224
+G G++ W P LSGH + + + + H P RF+ SAS+D R+
Sbjct: 275 ATGGAEGQVNLWSLSQDTPLAT-LSGHTQRVCRVDF---H---PSGRFLASASEDTSWRL 327
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGH--G 281
WDV R ++ GH+ V V + GDG ++ + QD ++W+ G+ I L GH G
Sbjct: 328 WDVEKRTELLLQEGHSRGVFAVSFNGDGSLLASAGQDSIGRIWDLRTGRTIMILDGHMDG 387
Query: 282 HWVNSLALSTEYALRTGAFDH 302
H + YAL G+ H
Sbjct: 388 H------IKPIYALDWGSDGH 402
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHAD----EVFAVDWSPDGEKVASGGK 491
S++ D LL S +DS ++WD+RT + L GH D ++A+DW DG +V S
Sbjct: 350 SFNGDGSLLASAGQDSIGRIWDLRTGRTIMILDGHMDGHIKPIYALDWGSDGHRVLSASA 409
Query: 492 DRVLKLW 498
D +K W
Sbjct: 410 DGWIKCW 416
Score = 102 (41.0 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 22/55 (40%), Positives = 29/55 (52%)
Query: 444 LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L+S D + ++ L Q L GH V +VD S DG + SGG DR +KLW
Sbjct: 469 LVSSGFDHKVNIYSADDWALVQSLSGHTGPVASVDVSRDGRWIVSGGHDRTVKLW 523
Score = 71 (30.1 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDW 479
W +D +LS S D +K WD+R + + H V + W
Sbjct: 397 WGSDGHRVLSASADGWIKCWDVRKVQRTGGVGAHTSAVSDMRW 439
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 239 (89.2 bits), Expect = 5.8e-17, P = 5.8e-17
Identities = 88/309 (28%), Positives = 143/309 (46%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH + VL++ F+ R L +GS D+T+ +WDL T + + +GH + V + + D + L
Sbjct: 300 GHMDGVLTLQFNY--RLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYF--DDRKL 355
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGI-SWEPVHLNAPCRRFVSASKDGDARI 224
++GS ++ W+ TG+ GH + + S++ V VS S D ++
Sbjct: 356 ITGSLDKTIRVWNYITGECIST-YRGHSDSVLSVDSYQKV--------IVSGSADKTVKV 406
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
W V R C L GHT V CVK ++ S D TI++W+ ++ +GH
Sbjct: 407 WHVESRTCYT-LRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDIRTNSCLKVFRGHVGQ 465
Query: 284 VNSLALSTEYALRTGAFDHTGKQYSSPEE---MKKAA-------LERYNKIKGNAP--ER 331
V + T + A D+T SSP++ M A E+ + N P
Sbjct: 466 VQKIIPLTIKDVENLATDNTSDG-SSPQDDPTMTDGADESDTPSNEQETVLDENIPYPTH 524
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L+S D T+ LW+ K +T+ GH + V + + D + S S D SIK+W+ +
Sbjct: 525 LLSCGLDNTIKLWDVKTGKCIRTQF-GHVEGVWDI--AADNFRIISGSHDGSIKVWDLQS 581
Query: 392 GKFVAVFRG 400
GK + F G
Sbjct: 582 GKCMHTFNG 590
Score = 193 (73.0 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 53/159 (33%), Positives = 82/159 (51%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGK--QYSSP 310
+++TGS D TI +W+ GKLIR L GH V +L + L TG+ D T + Y +
Sbjct: 314 LLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYFD-DRKLITGSLDKTIRVWNYITG 372
Query: 311 EEMKKAALERYNKIKGNAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFS 369
E + + + ++ ++ +VSGS D T+ +W V + + GH + VN V
Sbjct: 373 ECISTYRGHSDSVLSVDSYQKVIVSGSADKTVKVWH--VESRTCYTLRGHTEWVNCVKLH 430
Query: 370 PDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
P S S D +I++W+ T + VFRGHVG V +I
Sbjct: 431 PKSFSCFSCSDDTTIRMWDIRTNSCLKVFRGHVGQVQKI 469
Score = 154 (59.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 54/189 (28%), Positives = 81/189 (42%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
+R T+ GHTE V V P S S DTT+R+WD+ T + + GH V I
Sbjct: 411 SRTCYTLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDIRTNSCLKVFRGHVGQVQKII 470
Query: 158 --WSADGKHLVSGSKA-GELQCWDPQT--GKPSGNPLSGHKKWIT--GISWEPVHLNAPC 210
D ++L + + + G DP G + S ++ + I + P HL
Sbjct: 471 PLTIKDVENLATDNTSDGSSPQDDPTMTDGADESDTPSNEQETVLDENIPY-PTHL---- 525
Query: 211 RRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQ 270
+S D ++WDV KC+ GH V + +I +GS D +IKVW+
Sbjct: 526 ---LSCGLDNTIKLWDVKTGKCIRTQFGHVEGVWDIAADNFRII-SGSHDGSIKVWDLQS 581
Query: 271 GKLIRELKG 279
GK + G
Sbjct: 582 GKCMHTFNG 590
Score = 149 (57.5 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 44/155 (28%), Positives = 75/155 (48%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L +GS D T+ +W+ K + R++GH V +YF D + + + S DK+I++WN T
Sbjct: 315 LFTGSYDSTIGIWDLFTGKLIR-RLSGHSDGVKTLYF--DDRKLITGSLDKTIRVWNYIT 371
Query: 392 GKFVAVFRGHVGPVYQI-RFELIYCFRYPSNFYCV--VDMSCCMSLYS---WSADSRL-- 443
G+ ++ +RGH V + ++ + V V+ C +L W +L
Sbjct: 372 GECISTYRGHSDSVLSVDSYQKVIVSGSADKTVKVWHVESRTCYTLRGHTEWVNCVKLHP 431
Query: 444 ----LLSGSKDSTLKVWDIRTQKLKQDLPGHADEV 474
S S D+T+++WDIRT + GH +V
Sbjct: 432 KSFSCFSCSDDTTIRMWDIRTNSCLKVFRGHVGQV 466
Score = 146 (56.5 bits), Expect = 7.3e-12, Sum P(2) = 7.3e-12
Identities = 39/136 (28%), Positives = 67/136 (49%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH++ V ++ F D R+L +GS D T+R+W+ T + GH + VL + + K
Sbjct: 338 LSGHSDGVKTLYF--DDRKLITGSLDKTIRVWNYITGECISTYRGHSDSVLSV--DSYQK 393
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS ++ W ++ + L GH +W+ + P + C S S D R
Sbjct: 394 VIVSGSADKTVKVWHVESR--TCYTLRGHTEWVNCVKLHPKSFS--C---FSCSDDTTIR 446
Query: 224 IWDVSLRKCVICLSGH 239
+WD+ C+ GH
Sbjct: 447 MWDIRTNSCLKVFRGH 462
Score = 115 (45.5 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 26/82 (31%), Positives = 42/82 (51%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C +T GH+++VLSV + + SGS D TV++W + ++T + GH WV C+
Sbjct: 374 CISTYRGHSDSVLSV--DSYQKVIVSGSADKTVKVWHVESRT-CYTLRGHTEWVNCVKLH 430
Query: 160 ADGKHLVSGSKAGELQCWDPQT 181
S S ++ WD +T
Sbjct: 431 PKSFSCFSCSDDTTIRMWDIRT 452
Score = 95 (38.5 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 444 LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
LLS D+T+K+WD++T K + GH + V+ D + D ++ SG D +K+W
Sbjct: 525 LLSCGLDNTIKLWDVKTGKCIRTQFGHVEGVW--DIAADNFRIISGSHDGSIKVW 577
Score = 67 (28.6 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 438 SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPG 469
+AD+ ++SGS D ++KVWD+++ K G
Sbjct: 559 AADNFRIISGSHDGSIKVWDLQSGKCMHTFNG 590
Score = 42 (19.8 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 464 KQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+ D P + E + P + S G D +KLW
Sbjct: 503 ESDTPSNEQETVLDENIPYPTHLLSCGLDNTIKLW 537
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 236 (88.1 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 55/175 (31%), Positives = 89/175 (50%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLV 166
HT V SV FS DG+ LA+ S D ++++W + Q ++ H +WV C +S DG+ +V
Sbjct: 59 HTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 118
Query: 167 SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWD 226
S S+ ++ WD T K N S + + + P + C SA D ++WD
Sbjct: 119 SCSEDKTIKIWDT-TNKQCVNNFSDSVGFANFVDFNP---SGTC--IASAGSDQTVKVWD 172
Query: 227 VSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGH 280
V + K + H+ V C+ + G + T S D T+K+ + +G+LI L+GH
Sbjct: 173 VRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGH 227
Score = 209 (78.6 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 62/203 (30%), Positives = 93/203 (45%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH + V SV FSP G LAS S D TVRLW + + + H V + +SADG+ L
Sbjct: 16 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFL 75
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+ S+ ++ W + + L H W+ + P R VS S+D +IW
Sbjct: 76 ATASEDKSIKVWSMYRQRFLYS-LYRHTHWVRCAKFSP-----DGRLIVSCSEDKTIKIW 129
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
D + ++CV S V + G I + D T+KVW+ KL++ + H V
Sbjct: 130 DTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGV 189
Query: 285 NSLAL--STEYALRTGAFDHTGK 305
N ++ S Y + T + D T K
Sbjct: 190 NCISFHPSGNYLI-TASSDGTLK 211
Score = 193 (73.0 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 56/163 (34%), Positives = 83/163 (50%)
Query: 355 RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW-NGTTGKFVAVFRGHVGPVYQIRFELI 413
R GH+ +V V FSP G +ASAS D++++LW GKF + F+ H PV + F
Sbjct: 13 RYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKF-SEFKAHTAPVRSVDFSAD 71
Query: 414 YCFRYPSN------FYCVVDMSCCMSLYS---W------SADSRLLLSGSKDSTLKVWDI 458
F ++ + + SLY W S D RL++S S+D T+K+WD
Sbjct: 72 GQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 131
Query: 459 RTQKLKQDLPGHADEV-FA--VDWSPDGEKVASGGKDRVLKLW 498
KQ + +D V FA VD++P G +AS G D+ +K+W
Sbjct: 132 TN---KQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVW 171
Score = 178 (67.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 65/265 (24%), Positives = 113/265 (42%)
Query: 134 LWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDP-QTGKPSGNPLSGH 192
LW+ ++ GHK+ V + +S G L S S+ ++ W P + GK S H
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFS--EFKAH 59
Query: 193 KKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG 252
+ + + +A + +AS+D ++W + ++ + L HT V C K+ DG
Sbjct: 60 TAPVRSVDF-----SADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDG 114
Query: 253 -VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSP 310
+I + S+D TIK+W+TT + + + N + + + + D T K +
Sbjct: 115 RLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDV- 173
Query: 311 EEMKKAALERYNKIKGNA------PER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
+ K L+ Y G P L++ S D T+ + + + T + GH
Sbjct: 174 -RVNKL-LQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYT-LQGHTGP 230
Query: 363 VNHVYFSPDGQWVASASFDKSIKLW 387
V V FS G+ AS D + LW
Sbjct: 231 VFTVSFSKGGELFASGGADTQVLLW 255
Score = 156 (60.0 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 53/182 (29%), Positives = 80/182 (43%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L + S+D ++ +W ++ + H V FSPDG+ + S S DK+IK+W+ T
Sbjct: 75 LATASEDKSIKVWS-MYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN 133
Query: 392 GKFVAVFRGHVGPVYQIRFELI-YCFRYPSNFYCV----VDMSCCMSLY----------S 436
+ V F VG + F C + V V ++ + Y S
Sbjct: 134 KQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCIS 193
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+ L++ S D TLK+ D+ +L L GH VF V +S GE ASGG D +
Sbjct: 194 FHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 253
Query: 497 LW 498
LW
Sbjct: 254 LW 255
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 238 (88.8 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 82/315 (26%), Positives = 140/315 (44%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
+R +N + I G + FSP+ + LA+ +LW + + GH V
Sbjct: 218 LRSLNNFCSQI-GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNV 276
Query: 154 LCIAW------SADGK--HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
I + S D K +L S + G ++ W + +P + + GH + + W H
Sbjct: 277 GAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVAD-IEGHTVRVARVMW---H 332
Query: 206 LNAPCRRFVSAS-KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTI 263
P RF+ + D R+WD+ ++ ++ GH++ V + + DG + TG D
Sbjct: 333 ---PSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFG 389
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQ---------YSSPEEM 313
+VW+ G+ I L+GH + + S Y + TG+ D+T K Y+ P
Sbjct: 390 RVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ 449
Query: 314 KKAALERYNKIKGNAPERLVSGSDDFTMFLW-EPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
++ I GN L++G+ D T +W P S P + GH+ V + S DG
Sbjct: 450 NLVTGVKFEPIHGNF---LLTGAYDNTAKIWTHPGWS--PLKTLAGHEGKVMGLDISSDG 504
Query: 373 QWVASASFDKSIKLW 387
Q +A+ S+D++ KLW
Sbjct: 505 QLIATCSYDRTFKLW 519
Score = 148 (57.2 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 50/183 (27%), Positives = 82/183 (44%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L S + D ++ LW S +P + GH V V + P G+++ + +D+S +LW+
Sbjct: 296 LASCAADGSVKLWS-LDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEA 354
Query: 392 GKFVAVFRGHVGPVYQIRFELIYCFRYPSN---FYCVVDMS---CCMSL-------Y--S 436
+ + GH VY I F F V D+ C M L Y +
Sbjct: 355 QEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGIN 414
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSP-DGEKVASGGKDRVL 495
+S + + +GS D+T KVWD+R ++ +P H + V V + P G + +G D
Sbjct: 415 FSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTA 474
Query: 496 KLW 498
K+W
Sbjct: 475 KIW 477
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ +R RC + GH + + + FSP+G +A+GSGD T ++WDL + ++ H+
Sbjct: 391 VWDLR-TGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ 449
Query: 151 NWVLCIAWSA-DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAP 209
N V + + G L++G+ + W P L+GH+ + G+ +++
Sbjct: 450 NLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPL-KTLAGHEGKVMGLD-----ISSD 503
Query: 210 CRRFVSASKDGDARIW 225
+ + S D ++W
Sbjct: 504 GQLIATCSYDRTFKLW 519
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 47/173 (27%), Positives = 74/173 (42%)
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
LW+ +++ GH V + F DG + D ++W+ TG+ + GH+
Sbjct: 349 LWD-LEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHL 407
Query: 403 GPVYQIRFELI-YCFRYPS-NFYCVV-DMSCCMSLYSWSADSRL-------------LLS 446
+Y I F Y S + C V D+ +Y+ A L LL+
Sbjct: 408 KEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLT 467
Query: 447 GSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLWM 499
G+ D+T K+W + L GH +V +D S DG+ +A+ DR KLWM
Sbjct: 468 GAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWM 520
Score = 131 (51.2 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 40/148 (27%), Positives = 68/148 (45%)
Query: 366 VYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI------RFELIYCFRYP 419
V P +AS + D S+KLW+ + + VA GH V ++ RF C+
Sbjct: 287 VSLDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRS 346
Query: 420 SNFY-------CVVDMSCCMSLY--SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGH 470
+ + M +Y ++ D L +G D+ +VWD+RT + L GH
Sbjct: 347 WRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGH 406
Query: 471 ADEVFAVDWSPDGEKVASGGKDRVLKLW 498
E++ +++SP+G +A+G D K+W
Sbjct: 407 LKEIYGINFSPNGYHIATGSGDNTCKVW 434
>UNIPROTKB|Q29KQ0 [details] [associations]
symbol:GA19813 "Ribosome biogenesis protein WDR12 homolog"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH379061 GO:GO:0070545
GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154 HSSP:P61964 KO:K14863
OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_001356065.1
ProteinModelPortal:Q29KQ0 GeneID:4816649 KEGG:dpo:Dpse_GA19813
FlyBase:FBgn0079809 InParanoid:Q29KQ0 Uniprot:Q29KQ0
Length = 419
Score = 169 (64.5 bits), Expect = 4.9e-17, Sum P(2) = 4.9e-17
Identities = 68/240 (28%), Positives = 110/240 (45%)
Query: 103 TIAGHT---EAVLSVAFSPDGRQLASGSGDTTVRLWD----LNTQTPMFKCTGHKNWVLC 155
TI GHT +AV ++ D + S S D T LW NT + C GH+ V
Sbjct: 139 TIPGHTAPIKAVDWISLDDDTGRFVSSSQDQTAMLWQWNVGANTVECVSVCKGHERGVDS 198
Query: 156 IAWSADGKHLVSGSKAGELQCW-----DPQTG-----KPSG--NP---LSGHKKWITGIS 200
++ S DG+ +GS L+ W D G K SG P L GH++ I+ +
Sbjct: 199 VSVSPDGQRFATGSWDTMLKVWSAELEDAGEGTSKRMKESGVRTPKITLQGHRESISAVQ 258
Query: 201 WEPVHLNAPCRRFVSASKDGDARIWDVSLR--KCVICLSGHTLAVTCVKWGGDGVIYTGS 258
W ++A ++ S D ++WD+SL K I + + K + +I T S
Sbjct: 259 W----MDAST--LLTGSWDHTLKVWDLSLEGIKAEISTNKSIFDASYSKL--NHLILTAS 310
Query: 259 QDCTIKVWE--TTQGKLIRELK-GHGHWVNSLALST--EYALRTGAFDHTGKQYS--SPE 311
D +++++ T QG ++R GH WV ++ ST E+ +G++D+ K + SP+
Sbjct: 311 ADKNLRLYDSRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGSYDNQNKLWDCRSPK 370
Score = 160 (61.4 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 63/243 (25%), Positives = 106/243 (43%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLW----------------DLNTQTPM 143
C + GH V SV+ SPDG++ A+GS DT +++W + +TP
Sbjct: 185 CVSVCKGHERGVDSVSVSPDGQRFATGSWDTMLKVWSAELEDAGEGTSKRMKESGVRTPK 244
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
GH+ + + W D L++GS L+ WD +S +K I S+
Sbjct: 245 ITLQGHRESISAVQWM-DASTLLTGSWDHTLKVWDLSLEGIKAE-ISTNKS-IFDASYSK 301
Query: 204 V-HLNAPCRRFVSASKDGDARIWDVSLRKCVICLS---GHTLAVTCVKWGG--DGVIYTG 257
+ HL ++AS D + R++D + + + GH V V W + + +G
Sbjct: 302 LNHL------ILTASADKNLRLYDSRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSG 355
Query: 258 SQDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKA 316
S D K+W+ K + +L GHG V + S + +G D+T + + S +KA
Sbjct: 356 SYDNQNKLWDCRSPKAPLYDLLGHGEKVLDIDWSNPKYIVSGGSDNTVRVFKS----RKA 411
Query: 317 ALE 319
+E
Sbjct: 412 LVE 414
Score = 144 (55.7 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 58/229 (25%), Positives = 105/229 (45%)
Query: 280 HGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEM------KKAALERYNKIK-GNAPERL 332
H WV+++ S ++ L TG +D+T +++ + A ++ + I + R
Sbjct: 104 HDDWVSAVKASGKWIL-TGCYDNTLNIWTNKGKHILTIPGHTAPIKAVDWISLDDDTGRF 162
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMT---GHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
VS S D T LW+ V ++ GH++ V+ V SPDGQ A+ S+D +K+W+
Sbjct: 163 VSSSQDQTAMLWQWNVGANTVECVSVCKGHERGVDSVSVSPDGQRFATGSWDTMLKVWSA 222
Query: 390 TTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSK 449
G G +++ + R P + +S W D+ LL+GS
Sbjct: 223 ELED-----AGE-GTSKRMKESGV---RTPK--ITLQGHRESISAVQWM-DASTLLTGSW 270
Query: 450 DSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
D TLKVWD+ + +K ++ + +F +S + + D+ L+L+
Sbjct: 271 DHTLKVWDLSLEGIKAEISTNKS-IFDASYSKLNHLILTASADKNLRLY 318
Score = 139 (54.0 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 66/297 (22%), Positives = 115/297 (38%)
Query: 37 QLSQIVNKLL--NNEEKLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRI 94
+L+ VN LL + + F + D L L +L + +S E + I Y + F
Sbjct: 38 ELNTFVNALLLSKGSSAVDFDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVER--FPA 95
Query: 95 RPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
C H + V +V S G+ + +G D T+ +W N + GH +
Sbjct: 96 PEPQDCLL----HDDWVSAVKAS--GKWILTGCYDNTLNIWT-NKGKHILTIPGHTAPIK 148
Query: 155 CIAWSA---DGKHLVSGSKAGELQCWDPQTGKPSGNPLS---GHKKWITGISWEPVHLNA 208
+ W + D VS S+ W G + +S GH++ + +S P
Sbjct: 149 AVDWISLDDDTGRFVSSSQDQTAMLWQWNVGANTVECVSVCKGHERGVDSVSVSP----- 203
Query: 209 PCRRFVSASKDGDARIWDVSL----------------RKCVICLSGHTLAVTCVKWGGDG 252
+RF + S D ++W L R I L GH +++ V+W
Sbjct: 204 DGQRFATGSWDTMLKVWSAELEDAGEGTSKRMKESGVRTPKITLQGHRESISAVQWMDAS 263
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSS 309
+ TGS D T+KVW+ + + E+ + ++ + + T + D + Y S
Sbjct: 264 TLLTGSWDHTLKVWDLSLEGIKAEISTNKSIFDASYSKLNHLILTASADKNLRLYDS 320
Score = 123 (48.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 47/221 (21%), Positives = 91/221 (41%)
Query: 176 CWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVIC 235
C + G S + +++ TG SW+ + L A + R+ + +R I
Sbjct: 189 CKGHERGVDSVSVSPDGQRFATG-SWDTM-LKVWSAELEDAGEGTSKRMKESGVRTPKIT 246
Query: 236 LSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL 295
L GH +++ V+W + TGS D T+KVW+ + + E+ + ++ + +
Sbjct: 247 LQGHRESISAVQWMDASTLLTGSWDHTLKVWDLSLEGIKAEISTNKSIFDASYSKLNHLI 306
Query: 296 RTGAFDHTGKQYSSPEEMKKAALERY-------NKIKGNAPERL--VSGSDDFTMFLWEP 346
T + D + Y S Y + + E VSGS D LW+
Sbjct: 307 LTASADKNLRLYDSRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGSYDNQNKLWDC 366
Query: 347 AVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
K P + GH + V + +S + +++ S D +++++
Sbjct: 367 RSPKAPLYDLLGHGEKVLDIDWS-NPKYIVSGGSDNTVRVF 406
Score = 114 (45.2 bits), Expect = 4.9e-17, Sum P(2) = 4.9e-17
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 437 WSADSRLL-LSGSKDSTLKVWDIRTQKLK-QDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
WS L +SGS D+ K+WD R+ K DL GH ++V +DWS + + + SGG D
Sbjct: 344 WSTTEEFLFVSGSYDNQNKLWDCRSPKAPLYDLLGHGEKVLDIDWS-NPKYIVSGGSDNT 402
Query: 495 LKLW 498
++++
Sbjct: 403 VRVF 406
Score = 105 (42.0 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 46/206 (22%), Positives = 89/206 (43%)
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--- 248
H W++ + A + ++ D IW + K ++ + GHT + V W
Sbjct: 104 HDDWVSAVK-------ASGKWILTGCYDNTLNIW-TNKGKHILTIPGHTAPIKAVDWISL 155
Query: 249 GGD-GVIYTGSQDCTIKVWETTQG----KLIRELKGHGHWVNSLALSTE-YALRTGAFDH 302
D G + SQD T +W+ G + + KGH V+S+++S + TG++D
Sbjct: 156 DDDTGRFVSSSQDQTAMLWQWNVGANTVECVSVCKGHERGVDSVSVSPDGQRFATGSWDT 215
Query: 303 TGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
K +S+ E++ A +G + SG + PK + GH++
Sbjct: 216 MLKVWSA--ELEDAG-------EGTSKRMKESGV-------------RTPKITLQGHRES 253
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWN 388
++ V + D + + S+D ++K+W+
Sbjct: 254 ISAVQWM-DASTLLTGSWDHTLKVWD 278
Score = 64 (27.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 23/95 (24%), Positives = 48/95 (50%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L++GS D T+ +W+ ++ + K ++ ++ + + Y S + +AS DK+++L++ T
Sbjct: 265 LLTGSWDHTLKVWDLSL-EGIKAEISTNKSIFDASY-SKLNHLILTASADKNLRLYDSRT 322
Query: 392 --GKFVA-VFRGHVGPVYQIRFELIYCFRYPSNFY 423
G V + GH V + + F + S Y
Sbjct: 323 NQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGSY 357
Score = 42 (19.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 8/23 (34%), Positives = 16/23 (69%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIR 459
WS + + ++SG D+T++V+ R
Sbjct: 388 WS-NPKYIVSGGSDNTVRVFKSR 409
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 230 (86.0 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 80/320 (25%), Positives = 138/320 (43%)
Query: 83 SIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTP 142
S++ + + R +N + + GHT VL F P G ASG D + LW++
Sbjct: 25 SLITEGSVLQRTSDLNVPNLQMFGHTAEVLVARFDPSGSYFASGGMDRQILLWNVFGDVK 84
Query: 143 MFKC-TGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
+ G K + + WS D + + S L WD SG + HK ++
Sbjct: 85 NYGVLNGCKGAITDLQWSRDSRVVYCSSSDTHLMSWDAV----SGQKIRKHKGHAGVVNA 140
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQD 260
V L S S D ++WD + C+ + +T V G ++ G D
Sbjct: 141 LDV-LKVGSELLTSVSDDCTMKVWDSRSKDCIKTIE-EKYPLTAVAIAQQGTQVFIGGID 198
Query: 261 CTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTG-----KQYSSPE--- 311
IK+W+ LKGH + SLA+S + +L + + D+T K ++S +
Sbjct: 199 GAIKIWDLRNNHCSHVLKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQL 258
Query: 312 EMKKAAL--ERYNK--IKGNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHV 366
++ + A+ + +N + + R V +GS D +++W + + + + GH+ VNHV
Sbjct: 259 QIFEGAIHGQEHNLLGVAWSRNSRFVGAGSSDKNVYVW--SATGDLRYVLPGHEGSVNHV 316
Query: 367 YFSPDGQWVASASFDKSIKL 386
F P + S S D++I L
Sbjct: 317 DFHPHQDIILSCSSDRTIFL 336
Score = 147 (56.8 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 64/256 (25%), Positives = 113/256 (44%)
Query: 213 FVSASKDGDARIWDV--SLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETT 269
F S D +W+V ++ + L+G A+T ++W D V+Y S D + W+
Sbjct: 65 FASGGMDRQILLWNVFGDVKNYGV-LNGCKGAITDLQWSRDSRVVYCSSSDTHLMSWDAV 123
Query: 270 QGKLIRELKGHGHWVNSL-ALSTEYALRTGAFDH-TGKQYSS-PEEMKKAALERYN---- 322
G+ IR+ KGH VN+L L L T D T K + S ++ K E+Y
Sbjct: 124 SGQKIRKHKGHAGVVNALDVLKVGSELLTSVSDDCTMKVWDSRSKDCIKTIEEKYPLTAV 183
Query: 323 KIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
I + + G D + +W+ + + GH+ ++ + S DG + S S D
Sbjct: 184 AIAQQGTQVFIGGIDG-AIKIWDLR-NNHCSHVLKGHKDIITSLAISKDGSSLLSNSMDN 241
Query: 383 SIKLWN----GTTGKFVAVFRGHV-GPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSW 437
++++++ + + + +F G + G + + L + S F V S ++Y W
Sbjct: 242 TVRIFDVKPFASAQRQLQIFEGAIHGQEHNL---LGVAWSRNSRF--VGAGSSDKNVYVW 296
Query: 438 SA--DSRLLLSGSKDS 451
SA D R +L G + S
Sbjct: 297 SATGDLRYVLPGHEGS 312
Score = 99 (39.9 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
+WS +SR + +GS D + VW T L+ LPGH V VD+ P + + S DR +
Sbjct: 276 AWSRNSRFVGAGSSDKNVYVWSA-TGDLRYVLPGHEGSVNHVDFHPHQDIILSCSSDRTI 334
Query: 496 KL 497
L
Sbjct: 335 FL 336
Score = 80 (33.2 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 21/70 (30%), Positives = 31/70 (44%)
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN--GTTGKFVAVFRGHVGPVYQIR 409
P +M GH V F P G + AS D+ I LWN G + V G G + ++
Sbjct: 42 PNLQMFGHTAEVLVARFDPSGSYFASGGMDRQILLWNVFGDVKNY-GVLNGCKGAITDLQ 100
Query: 410 FE----LIYC 415
+ ++YC
Sbjct: 101 WSRDSRVVYC 110
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 238 (88.8 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 82/315 (26%), Positives = 140/315 (44%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
+R +N + I G + FSP+ + LA+ +LW + + GH V
Sbjct: 233 LRSLNNFCSQI-GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNV 291
Query: 154 LCIAW------SADGK--HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
I + S D K +L S + G ++ W + +P + + GH + + W H
Sbjct: 292 GAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVAD-IEGHTVRVARVMW---H 347
Query: 206 LNAPCRRFVSAS-KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTI 263
P RF+ + D R+WD+ ++ ++ GH++ V + + DG + TG D
Sbjct: 348 ---PSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFG 404
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQ---------YSSPEEM 313
+VW+ G+ I L+GH + + S Y + TG+ D+T K Y+ P
Sbjct: 405 RVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ 464
Query: 314 KKAALERYNKIKGNAPERLVSGSDDFTMFLW-EPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
++ I GN L++G+ D T +W P S P + GH+ V + S DG
Sbjct: 465 NLVTGVKFEPIHGNF---LLTGAYDNTAKIWTHPGWS--PLKTLAGHEGKVMGLDISSDG 519
Query: 373 QWVASASFDKSIKLW 387
Q +A+ S+D++ KLW
Sbjct: 520 QLIATCSYDRTFKLW 534
Score = 148 (57.2 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 50/183 (27%), Positives = 82/183 (44%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L S + D ++ LW S +P + GH V V + P G+++ + +D+S +LW+
Sbjct: 311 LASCAADGSVKLWS-LDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEA 369
Query: 392 GKFVAVFRGHVGPVYQIRFELIYCFRYPSN---FYCVVDMS---CCMSL-------Y--S 436
+ + GH VY I F F V D+ C M L Y +
Sbjct: 370 QEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGIN 429
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSP-DGEKVASGGKDRVL 495
+S + + +GS D+T KVWD+R ++ +P H + V V + P G + +G D
Sbjct: 430 FSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTA 489
Query: 496 KLW 498
K+W
Sbjct: 490 KIW 492
Score = 144 (55.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ +R RC + GH + + + FSP+G +A+GSGD T ++WDL + ++ H+
Sbjct: 406 VWDLR-TGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ 464
Query: 151 NWVLCIAWSA-DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAP 209
N V + + G L++G+ + W P L+GH+ + G+ +++
Sbjct: 465 NLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPL-KTLAGHEGKVMGLD-----ISSD 518
Query: 210 CRRFVSASKDGDARIW 225
+ + S D ++W
Sbjct: 519 GQLIATCSYDRTFKLW 534
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 47/173 (27%), Positives = 74/173 (42%)
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
LW+ +++ GH V + F DG + D ++W+ TG+ + GH+
Sbjct: 364 LWD-LEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHL 422
Query: 403 GPVYQIRFELI-YCFRYPS-NFYCVV-DMSCCMSLYSWSADSRL-------------LLS 446
+Y I F Y S + C V D+ +Y+ A L LL+
Sbjct: 423 KEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLT 482
Query: 447 GSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLWM 499
G+ D+T K+W + L GH +V +D S DG+ +A+ DR KLWM
Sbjct: 483 GAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWM 535
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 238 (88.8 bits), Expect = 5.1e-17, P = 5.1e-17
Identities = 82/315 (26%), Positives = 140/315 (44%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
+R +N + I G + FSP+ + LA+ +LW + + GH V
Sbjct: 235 LRSLNNFCSQI-GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNV 293
Query: 154 LCIAW------SADGK--HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
I + S D K +L S + G ++ W + +P + + GH + + W H
Sbjct: 294 GAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVAD-IEGHTVRVARVMW---H 349
Query: 206 LNAPCRRFVSAS-KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTI 263
P RF+ + D R+WD+ ++ ++ GH++ V + + DG + TG D
Sbjct: 350 ---PSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFG 406
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQ---------YSSPEEM 313
+VW+ G+ I L+GH + + S Y + TG+ D+T K Y+ P
Sbjct: 407 RVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ 466
Query: 314 KKAALERYNKIKGNAPERLVSGSDDFTMFLW-EPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
++ I GN L++G+ D T +W P S P + GH+ V + S DG
Sbjct: 467 NLVTGVKFEPIHGNF---LLTGAYDNTAKIWTHPGWS--PLKTLAGHEGKVMGLDISSDG 521
Query: 373 QWVASASFDKSIKLW 387
Q +A+ S+D++ KLW
Sbjct: 522 QLIATCSYDRTFKLW 536
Score = 148 (57.2 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 50/183 (27%), Positives = 82/183 (44%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L S + D ++ LW S +P + GH V V + P G+++ + +D+S +LW+
Sbjct: 313 LASCAADGSVKLWS-LDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEA 371
Query: 392 GKFVAVFRGHVGPVYQIRFELIYCFRYPSN---FYCVVDMS---CCMSL-------Y--S 436
+ + GH VY I F F V D+ C M L Y +
Sbjct: 372 QEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGIN 431
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSP-DGEKVASGGKDRVL 495
+S + + +GS D+T KVWD+R ++ +P H + V V + P G + +G D
Sbjct: 432 FSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTA 491
Query: 496 KLW 498
K+W
Sbjct: 492 KIW 494
Score = 144 (55.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ +R RC + GH + + + FSP+G +A+GSGD T ++WDL + ++ H+
Sbjct: 408 VWDLR-TGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ 466
Query: 151 NWVLCIAWSA-DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAP 209
N V + + G L++G+ + W P L+GH+ + G+ +++
Sbjct: 467 NLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPL-KTLAGHEGKVMGLD-----ISSD 520
Query: 210 CRRFVSASKDGDARIW 225
+ + S D ++W
Sbjct: 521 GQLIATCSYDRTFKLW 536
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 47/173 (27%), Positives = 74/173 (42%)
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
LW+ +++ GH V + F DG + D ++W+ TG+ + GH+
Sbjct: 366 LWD-LEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHL 424
Query: 403 GPVYQIRFELI-YCFRYPS-NFYCVV-DMSCCMSLYSWSADSRL-------------LLS 446
+Y I F Y S + C V D+ +Y+ A L LL+
Sbjct: 425 KEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLT 484
Query: 447 GSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLWM 499
G+ D+T K+W + L GH +V +D S DG+ +A+ DR KLWM
Sbjct: 485 GAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWM 537
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 215 (80.7 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 78/272 (28%), Positives = 119/272 (43%)
Query: 153 VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRR 212
V + W+ DG L +GS G + W +T + L HK I + W C
Sbjct: 413 VTSLDWNCDGSLLATGSYDGYARIW--KTDGRLASTLGQHKGPIFALKWNK------CGN 464
Query: 213 FV-SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQG 271
++ SA D IWD S +C + H+ V W + + S D I V
Sbjct: 465 YILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAFASCSTDQRIHVCRLGVN 524
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDH-TGKQYSSPEEMKKAALERYNK----IK- 325
+ I+ KGH + VN++ + L D T K +S + L+ ++K IK
Sbjct: 525 EPIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKW 584
Query: 326 -----G-NAPER---LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVA 376
G N P L S S D T+ LW+ T +T H + V V FSPDG+ +A
Sbjct: 585 SPTGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHT-LTKHTEPVYSVAFSPDGKHLA 643
Query: 377 SASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
S SFDK + +W+ TG+ V ++G G ++++
Sbjct: 644 SGSFDKCVHIWSTQTGQLVHSYKG-TGGIFEV 674
Score = 205 (77.2 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 58/188 (30%), Positives = 82/188 (43%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C+ A H+ L V + + + AS S D + + L P+ GH N V I W
Sbjct: 484 QCTQQFAFHSAPALDVDWQTN-QAFASCSTDQRIHVCRLGVNEPIKTFKGHTNEVNAIKW 542
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH--LNAPCRRFV-- 214
G+ L S S L+ W + + L H K I I W P N P +
Sbjct: 543 CPQGQLLASCSDDMTLKIWSMNRDRCC-HDLQAHSKEIYTIKWSPTGPGTNNPNTNLILA 601
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKL 273
SAS D R+WDV C+ L+ HT V V + DG + +GS D + +W T G+L
Sbjct: 602 SASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGKHLASGSFDKCVHIWSTQTGQL 661
Query: 274 IRELKGHG 281
+ KG G
Sbjct: 662 VHSYKGTG 669
Score = 173 (66.0 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 58/199 (29%), Positives = 86/199 (43%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDL---NT---QTPMFKCT--------GH 149
+ GH V A++P LASGSGD+T R+WD+ NT Q + C +
Sbjct: 351 LRGHESEVFICAWNPSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAEVPSN 410
Query: 150 KNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAP 209
K+ V + W+ DG L +GS G + W +T + L HK I + W
Sbjct: 411 KD-VTSLDWNCDGSLLATGSYDGYARIW--KTDGRLASTLGQHKGPIFALKWNK------ 461
Query: 210 CRRFV-SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWET 268
C ++ SA D IWD S +C + H+ V W + + S D I V
Sbjct: 462 CGNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAFASCSTDQRIHVCRL 521
Query: 269 TQGKLIRELKGHGHWVNSL 287
+ I+ KGH + VN++
Sbjct: 522 GVNEPIKTFKGHTNEVNAI 540
Score = 150 (57.9 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 58/235 (24%), Positives = 97/235 (41%)
Query: 194 KWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWG--GD 251
K +T + W N + S DG ARIW R L H + +KW G+
Sbjct: 411 KDVTSLDW-----NCDGSLLATGSYDGYARIWKTDGR-LASTLGQHKGPIFALKWNKCGN 464
Query: 252 GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFD---HTGKQ-Y 307
++ G TI +W+ + G+ ++ H + T A + + D H +
Sbjct: 465 YILSAGVDKTTI-IWDASTGQCTQQFAFHSAPALDVDWQTNQAFASCSTDQRIHVCRLGV 523
Query: 308 SSPEEMKKAALERYNKIKGNAPER--LVSGSDDFTMFLWEPAVSKQPKTR-MTGHQQLVN 364
+ P + K N IK P+ L S SDD T+ +W ++++ + H + +
Sbjct: 524 NEPIKTFKGHTNEVNAIKW-CPQGQLLASCSDDMTLKIW--SMNRDRCCHDLQAHSKEIY 580
Query: 365 HVYFSPDGQW---------VASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
+ +SP G +ASASFD +++LW+ G + H PVY + F
Sbjct: 581 TIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAF 635
Score = 149 (57.5 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 51/215 (23%), Positives = 88/215 (40%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
R ++T+ H + ++ ++ G + S D T +WD +T + H L + W
Sbjct: 442 RLASTLGQHKGPIFALKWNKCGNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDW 501
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV-HLNAPCRRFVSAS 217
+ + S S + +P GH + I W P L A C S
Sbjct: 502 QTN-QAFASCSTDQRIHVCRLGVNEPI-KTFKGHTNEVNAIKWCPQGQLLASC------S 553
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWG--GDG--------VIYTGSQDCTIKVWE 267
D +IW ++ +C L H+ + +KW G G ++ + S D T+++W+
Sbjct: 554 DDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWD 613
Query: 268 TTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFD 301
+G I L H V S+A S + L +G+FD
Sbjct: 614 VERGSCIHTLTKHTEPVYSVAFSPDGKHLASGSFD 648
Score = 145 (56.1 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 62/287 (21%), Positives = 117/287 (40%)
Query: 236 LSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
L GH V W ++ +GS D T ++W+ + NS L +
Sbjct: 351 LRGHESEVFICAWNPSRDLLASGSGDSTARIWDMSDAN-----------TNSNQLVLRHC 399
Query: 295 LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKT 354
++ G G + S +++ +L+ +N G+ L +GS D +W+ + +
Sbjct: 400 IQKG-----GAEVPSNKDV--TSLD-WN-CDGSL---LATGSYDGYARIWK--TDGRLAS 445
Query: 355 RMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIY 414
+ H+ + + ++ G ++ SA DK+ +W+ +TG+ F H P + ++
Sbjct: 446 TLGQHKGPIFALKWNKCGNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQ 505
Query: 415 CFRYPSN----FYCVVDMSCCMSLYS----------WSADSRLLLSGSKDSTLKVWDIRT 460
F S C + ++ + + W +LL S S D TLK+W +
Sbjct: 506 AFASCSTDQRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNR 565
Query: 461 QKLKQDLPGHADEVFAVDWSPDGEK---------VASGGKDRVLKLW 498
+ DL H+ E++ + WSP G +AS D ++LW
Sbjct: 566 DRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLW 612
Score = 141 (54.7 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 34/95 (35%), Positives = 50/95 (52%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQ---------LASGSGDTTVRLWDLNTQTPMFKCTG 148
+RC + H++ + ++ +SP G LAS S D+TVRLWD+ + + T
Sbjct: 566 DRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTK 625
Query: 149 HKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGK 183
H V +A+S DGKHL SGS + W QTG+
Sbjct: 626 HTEPVYSVAFSPDGKHLASGSFDKCVHIWSTQTGQ 660
Score = 117 (46.2 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 21/56 (37%), Positives = 35/56 (62%)
Query: 443 LLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+L S S DST+++WD+ L H + V++V +SPDG+ +ASG D+ + +W
Sbjct: 599 ILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGKHLASGSFDKCVHIW 654
Score = 81 (33.6 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKD 492
++S D + L SGS D + +W +T +L G +F V W+ G KV + D
Sbjct: 634 AFSPDGKHLASGSFDKCVHIWSTQTGQLVHSYKGTGG-IFEVCWNSKGTKVGASASD 689
>MGI|MGI:1927241 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10090 "Mus
musculus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IPI]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0030687
"preribosome, large subunit precursor" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0070545 "PeBoW complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1927241 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:AY059431 EMBL:AY059432
EMBL:AF239765 EMBL:AB041608 EMBL:AK007500 EMBL:AK012022
EMBL:AK016611 EMBL:AK031436 EMBL:BC004748 EMBL:BC052386
IPI:IPI00121562 RefSeq:NP_001185989.1 RefSeq:NP_001185990.1
RefSeq:NP_067287.1 UniGene:Mm.281079 ProteinModelPortal:Q9JJA4
SMR:Q9JJA4 STRING:Q9JJA4 PhosphoSite:Q9JJA4 PaxDb:Q9JJA4
PRIDE:Q9JJA4 Ensembl:ENSMUST00000027173 Ensembl:ENSMUST00000117438
Ensembl:ENSMUST00000122038 GeneID:57750 KEGG:mmu:57750
InParanoid:Q9JJA4 NextBio:313896 Bgee:Q9JJA4 CleanEx:MM_WDR12
Genevestigator:Q9JJA4 GermOnline:ENSMUSG00000026019 Uniprot:Q9JJA4
Length = 423
Score = 235 (87.8 bits), Expect = 5.2e-17, P = 5.2e-17
Identities = 54/161 (33%), Positives = 85/161 (52%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GHTEA+ SV +S D ++ S S D T+R+WD+ + TG+K + CI++S
Sbjct: 252 TLSGHTEAISSVLWS-DAEEICSASWDHTIRVWDVESGGLKSTLTGNKVFN-CISYSPLC 309
Query: 163 KHLVSGSKAGELQCWDPQT--GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
K L SGS ++ WDP+T G L+ H W+T + W P H ++ +S S D
Sbjct: 310 KRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHE----QQLISGSLDN 365
Query: 221 DARIWDV-SLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQD 260
++WD S + + L+ H V V W G++ +G D
Sbjct: 366 IVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGAD 406
Score = 172 (65.6 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 61/231 (26%), Positives = 109/231 (47%)
Query: 280 HGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPER-------L 332
H W++S+ + E+ L +G++D T + +S + + + +K A + L
Sbjct: 100 HDDWISSIEGAEEWIL-SGSYDKTSRIWSLEGKSIMTIVGHTDVVKDVAWVKKDSLSCLL 158
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRM---TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
++ S D T+ LWE V K + GH V+ + G S S+DK +K+W+
Sbjct: 159 LTASMDQTVLLWEWNVEKNKVKALHCCRGHAGSVDAIAVDSSGAKFCSGSWDKMLKIWST 218
Query: 390 T-TGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGS 448
T + + P + + E + R P + + +S WS D+ + S S
Sbjct: 219 VPTDEEDEMEEATNRPRKKQKTEQLGLTRTP--LVTLSGHTEAISSVLWS-DAEEICSAS 275
Query: 449 KDSTLKVWDIRTQKLKQDLPGHADEVF-AVDWSPDGEKVASGGKDRVLKLW 498
D T++VWD+ + LK L G+ +VF + +SP +++ASG DR ++LW
Sbjct: 276 WDHTIRVWDVESGGLKSTLTGN--KVFNCISYSPLCKRLASGSTDRHIRLW 324
Score = 170 (64.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 54/179 (30%), Positives = 87/179 (48%)
Query: 139 TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG 198
T+TP+ +GH + + WS D + + S S ++ WD ++G L+G+K +
Sbjct: 246 TRTPLVTLSGHTEAISSVLWS-DAEEICSASWDHTIRVWDVESGGLKST-LTGNKVF-NC 302
Query: 199 ISWEPVHLNAPCRRFVSASKDGDARIWDVSLRK-CVICLS--GHTLAVTCVKWGG--DGV 253
IS+ P+ C+R S S D R+WD + ++ LS HT VT VKW +
Sbjct: 303 ISYSPL-----CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 357
Query: 254 IYTGSQDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS-SP 310
+ +GS D +K+W+T K + +L H V S+ + L +G D+ YS SP
Sbjct: 358 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYSYSP 416
Score = 141 (54.7 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 62/274 (22%), Positives = 120/274 (43%)
Query: 145 KCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV 204
+C H +W+ I + + ++SGS + W + GK S + GH + ++W V
Sbjct: 96 QCMFHDDWISSIEGAEEW--ILSGSYDKTSRIWSLE-GK-SIMTIVGHTDVVKDVAW--V 149
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLRKCVI----CLSGHTLAVTCVKWGGDGVIY-TGSQ 259
++ ++AS D +W+ ++ K + C GH +V + G + +GS
Sbjct: 150 KKDSLSCLLLTASMDQTVLLWEWNVEKNKVKALHCCRGHAGSVDAIAVDSSGAKFCSGSW 209
Query: 260 DCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALE 319
D +K+W T E++ +T + + G +P E
Sbjct: 210 DKMLKIWSTVPTDEEDEMEE----------ATNRPRKKQKTEQLGLT-RTPLVTLSGHTE 258
Query: 320 RYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+ + + E + S S D T+ +W+ S K+ +TG++ + N + +SP + +AS S
Sbjct: 259 AISSVLWSDAEEICSASWDHTIRVWD-VESGGLKSTLTGNK-VFNCISYSPLCKRLASGS 316
Query: 380 FDKSIKLWNGTT--GKFVAV-FRGHVGPVYQIRF 410
D+ I+LW+ T G V++ H G V +++
Sbjct: 317 TDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Score = 136 (52.9 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMF---KCTGHKNWVLCIAW 158
+T+ G+ + +++SP ++LASGS D +RLWD T+ T H WV + W
Sbjct: 292 STLTGN-KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Query: 159 S-ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
S + L+SGS ++ WD ++ K L+ H+ + + W
Sbjct: 351 SPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDW 394
Score = 123 (48.4 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 55/210 (26%), Positives = 90/210 (42%)
Query: 26 PMYFPQNAGPQQLSQIVNKLLNNEEKL----PYAFYISDHELLVPLGSYLEKHKVSVEKV 81
P P A LS I+NKLL + +L + F I L VPL ++E +S E+V
Sbjct: 21 PFSIPAAAEVADLSNIINKLLETKNELHKHVEFDFLIKGQFLRVPLVKHMELENISSEEV 80
Query: 82 LSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
+ + Y + + +C H + + S+ + + + SGS D T R+W L ++
Sbjct: 81 VELEYVEK--YTAPQPEQCMF----HDDWISSIEGAEEW--ILSGSYDKTSRIWSLEGKS 132
Query: 142 PMFKCTGHKNWVLCIAW-SADGKH--LVSGSKAGELQCWDPQTGKPSGNPLS---GHKKW 195
M GH + V +AW D L++ S + W+ K L GH
Sbjct: 133 IM-TIVGHTDVVKDVAWVKKDSLSCLLLTASMDQTVLLWEWNVEKNKVKALHCCRGH--- 188
Query: 196 ITGISWEPVHLNAPCRRFVSASKDGDARIW 225
G S + + +++ +F S S D +IW
Sbjct: 189 -AG-SVDAIAVDSSGAKFCSGSWDKMLKIW 216
Score = 113 (44.8 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 26/61 (42%), Positives = 36/61 (59%)
Query: 437 WS-ADSRLLLSGSKDSTLKVWDIRTQKLK-QDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
WS + L+SGS D+ +K+WD R+ K DL H D+V +VDW+ G + SGG D
Sbjct: 350 WSPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTG-LLLSGGADNK 408
Query: 495 L 495
L
Sbjct: 409 L 409
Score = 106 (42.4 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 41/163 (25%), Positives = 75/163 (46%)
Query: 230 RKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL 289
R ++ LSGHT A++ V W I + S D TI+VW+ G L L G+ + N ++
Sbjct: 247 RTPLVTLSGHTEAISSVLWSDAEEICSASWDHTIRVWDVESGGLKSTLTGNKVF-NCISY 305
Query: 290 STEYA-LRTGAFDHTGKQY---SSPEEMKKAALERYN----KIKGNAP--ERLVSGSDDF 339
S L +G+ D + + + + +L + +K + ++L+SGS D
Sbjct: 306 SPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDN 365
Query: 340 TMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
+ LW+ K P + H+ V V ++ G ++ + +K
Sbjct: 366 IVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNK 408
Score = 105 (42.0 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQK---LKQDLPGHADEVFAVDWSPDGEK-VASGGK 491
S+S + L SGS D +++WD RT+ + L H V +V WSP E+ + SG
Sbjct: 304 SYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSL 363
Query: 492 DRVLKLW 498
D ++KLW
Sbjct: 364 DNIVKLW 370
Score = 100 (40.3 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 35/120 (29%), Positives = 55/120 (45%)
Query: 277 LKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG---NAP--ER 331
L GH ++S+ S + + ++DHT + + K+ L NK+ +P +R
Sbjct: 253 LSGHTEAISSVLWSDAEEICSASWDHTIRVWDVESGGLKSTLTG-NKVFNCISYSPLCKR 311
Query: 332 LVSGSDDFTMFLWEPAVSKQP--KTRMTGHQQLVNHVYFSPDG-QWVASASFDKSIKLWN 388
L SGS D + LW+P +T H V V +SP Q + S S D +KLW+
Sbjct: 312 LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWD 371
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 231 (86.4 bits), Expect = 6.0e-17, P = 6.0e-17
Identities = 73/298 (24%), Positives = 138/298 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH VL +SPD R + S S D + +WD T T W++ A++ G
Sbjct: 66 LKGHQAKVLCTDWSPDKRHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAPSGN 125
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWI-TGISWEP--VHLNAPCRRFVSASKDG 220
+ G ++ + P T S ++ K+ + T S+ ++ N+ ++ ++ S D
Sbjct: 126 FVACGGLDNKVTVY-PIT---SDEEMAAKKRTVGTHTSYMSCCIYPNSD-QQILTGSGDS 180
Query: 221 DARIWDVSLRKCVICLSGHT---LAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIREL 277
+WDV + + GH+ +A+ +GS D +W+ G +++
Sbjct: 181 TCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSF 240
Query: 278 KGHGHWVNSLALST-EYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG-NAPERLVSG 335
+GH VNS+ A+ TG+ D + + Y + + A + + I G N+ + VSG
Sbjct: 241 EGHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRADREVAVFAKESIIFGVNSVDFSVSG 300
Query: 336 S------DDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
+D+T+ LW+ S++ + GH+ V+ V SPDG +++ S+D +I++W
Sbjct: 301 RLLFAGYNDYTVNLWDTLKSERV-CLLYGHENKVSCVQVSPDGTALSTGSWDYTIRVW 357
Score = 181 (68.8 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 54/208 (25%), Positives = 100/208 (48%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI--AWSA 160
T+ HT + + +Q+ +GSGD+T LWD+ + + GH V+ I A +
Sbjct: 153 TVGTHTSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNE 212
Query: 161 DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA-SKD 219
G VSGS WD ++G + GH+ + + + H PC ++ S D
Sbjct: 213 TGNTFVSGSCDRMAFIWDMRSGHVVQS-FEGHQSDVNSVKF---H---PCGDAIATGSDD 265
Query: 220 GDARIWDVSLRKCVICLSGHTL--AVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRE 276
R++D+ + V + ++ V V + G +++ G D T+ +W+T + + +
Sbjct: 266 SSCRLYDMRADREVAVFAKESIIFGVNSVDFSVSGRLLFAGYNDYTVNLWDTLKSERVCL 325
Query: 277 LKGHGHWVNSLALSTE-YALRTGAFDHT 303
L GH + V+ + +S + AL TG++D+T
Sbjct: 326 LYGHENKVSCVQVSPDGTALSTGSWDYT 353
Score = 175 (66.7 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 64/275 (23%), Positives = 119/275 (43%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLN 207
GH+ VLC WS D +H++S S+ G L WD T + ++ WI ++
Sbjct: 68 GHQAKVLCTDWSPDKRHIISSSQDGRLIIWDAFTTNKE-HAVTMPTTWIMACAY------ 120
Query: 208 APCRRFVSASK-DGDARIWDVSLRKCVIC----LSGHTLAVTCVKW-GGDGVIYTGSQDC 261
AP FV+ D ++ ++ + + + HT ++C + D I TGS D
Sbjct: 121 APSGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDS 180
Query: 262 TIKVWETTQGKLIRELKGHGHWVNSLALS---TEYALRTGAFDHTGKQYSSPEEMKKAAL 318
T +W+ G+L++ GH V ++ L+ T +G+ D + +
Sbjct: 181 TCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSF 240
Query: 319 ERY----NKIKGN-APERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL---VNHVYFSP 370
E + N +K + + + +GSDD + L++ ++ + + + VN V FS
Sbjct: 241 EGHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRADRE--VAVFAKESIIFGVNSVDFSV 298
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
G+ + + D ++ LW+ + V + GH V
Sbjct: 299 SGRLLFAGYNDYTVNLWDTLKSERVCLLYGHENKV 333
Score = 136 (52.9 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 49/188 (26%), Positives = 78/188 (41%)
Query: 236 LSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTE-Y 293
L GH V C W D I + SQD + +W+ + W+ + A +
Sbjct: 66 LKGHQAKVLCTDWSPDKRHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAPSGN 125
Query: 294 ALRTGAFDHTGKQY--SSPEEM--KKAALERYNK-----IKGNAPERLVSGSDDFTMFLW 344
+ G D+ Y +S EEM KK + + I N+ +++++GS D T LW
Sbjct: 126 FVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDSTCALW 185
Query: 345 EPAVSKQPKTRMTGHQQLVNHVYFSPD--GQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
+ S Q GH V + +P+ G S S D+ +W+ +G V F GH
Sbjct: 186 D-VESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQ 244
Query: 403 GPVYQIRF 410
V ++F
Sbjct: 245 SDVNSVKF 252
Score = 130 (50.8 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 28/73 (38%), Positives = 45/73 (61%)
Query: 428 MSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPD--GEK 485
MSCC +Y ++D ++L +GS DST +WD+ + +L Q GH+ +V A+D +P+ G
Sbjct: 161 MSCC--IYP-NSDQQIL-TGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNT 216
Query: 486 VASGGKDRVLKLW 498
SG DR+ +W
Sbjct: 217 FVSGSCDRMAFIW 229
Score = 119 (46.9 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 56/226 (24%), Positives = 90/226 (39%)
Query: 189 LSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDV-SLRKCVICLSGHTLAVTCVK 247
L GH+ + W P R +S+S+DG IWD + K T + C
Sbjct: 66 LKGHQAKVLCTDWSPDK-----RHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAY 120
Query: 248 WGGDGVIYTGSQDCTIKVWETTQGKLI----RELKGHGHWVNSLAL-STEYALRTGAFDH 302
+ G D + V+ T + + R + H +++ +++ + TG+ D
Sbjct: 121 APSGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDS 180
Query: 303 TGKQYSSPEEMKKAALERYNKIKGN------APER----LVSGSDDFTMFLWEPAVSKQP 352
T + L+ ++ G+ AP VSGS D F+W+ S
Sbjct: 181 TCALWDVESGQ---LLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMR-SGHV 236
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVF 398
GHQ VN V F P G +A+ S D S +L++ + VAVF
Sbjct: 237 VQSFEGHQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRADREVAVF 282
Score = 104 (41.7 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 21/63 (33%), Positives = 39/63 (61%)
Query: 437 WSADSRLLLSGSKDSTLKVWD-IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
+S RLL +G D T+ +WD ++++++ L GH ++V V SPDG +++G D +
Sbjct: 296 FSVSGRLLFAGYNDYTVNLWDTLKSERVCL-LYGHENKVSCVQVSPDGTALSTGSWDYTI 354
Query: 496 KLW 498
++W
Sbjct: 355 RVW 357
Score = 93 (37.8 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 445 LSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+SGS D +WD+R+ + Q GH +V +V + P G+ +A+G D +L+
Sbjct: 218 VSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPCGDAIATGSDDSSCRLY 271
Score = 67 (28.6 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 348 VSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG-TTGKFVAV 397
V+ +P+ + GHQ V +SPD + + S+S D + +W+ TT K AV
Sbjct: 58 VNIKPRKVLKGHQAKVLCTDWSPDKRHIISSSQDGRLIIWDAFTTNKEHAV 108
Score = 59 (25.8 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 17/60 (28%), Positives = 33/60 (55%)
Query: 444 LLSGSKDSTLKVWDIRTQKLKQDLPGHADE--VF---AVDWSPDGEKVASGGKDRVLKLW 498
+ +GS DS+ +++D+R + ++ A E +F +VD+S G + +G D + LW
Sbjct: 259 IATGSDDSSCRLYDMRADR---EVAVFAKESIIFGVNSVDFSVSGRLLFAGYNDYTVNLW 315
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 237 (88.5 bits), Expect = 6.0e-17, P = 6.0e-17
Identities = 81/315 (25%), Positives = 142/315 (45%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
+R +N + I G + FSP+ + LA+ +LW + + + GH V
Sbjct: 217 LRSLNNFCSQI-GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNV 275
Query: 154 LCIAW------SADGK--HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
I + S D K +L S + G ++ W + +P + + GH + + W H
Sbjct: 276 GAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVAD-IEGHTVRVARVMW---H 331
Query: 206 LNAPCRRFVSAS-KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTI 263
P RF+ + D R+WD+ ++ ++ GH++ V + + DG + TG D
Sbjct: 332 ---PSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFG 388
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQ---------YSSPEEM 313
+VW+ G+ I L+GH + ++ S Y + TG+ D+T K Y+ P
Sbjct: 389 RVWDLRTGRCIMFLEGHLKEIYGISFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ 448
Query: 314 KKAALERYNKIKGNAPERLVSGSDDFTMFLW-EPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
++ I G+ L++G+ D T +W P S P + GH+ V + S DG
Sbjct: 449 NLVTGVKFEPIHGDF---LLTGAYDNTAKIWTHPGWS--PLKTLAGHEGKVMGLDISSDG 503
Query: 373 QWVASASFDKSIKLW 387
Q +A+ S+D++ KLW
Sbjct: 504 QLIATCSYDRTFKLW 518
Score = 169 (64.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 65/260 (25%), Positives = 109/260 (41%)
Query: 158 WSADGKHLVSGSKAGELQCWD-PQTGKPSGNPLSGHKKWITGISWEP---VHLNAPCRRF 213
+S + K L + +G + W P + L GH + I + P V L+
Sbjct: 238 FSPNSKMLATACWSGLCKLWSVPDCSLL--HTLRGHNTNVGAIVFHPKSTVSLDQKDVNL 295
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
S + DG ++W + + V + GHT+ V V W G + T D + ++W+ +
Sbjct: 296 ASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQE 355
Query: 273 LIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPEEMKKAALERYNK-IKGNA-- 328
I +GH V +A + +L TG D G+ + LE + K I G +
Sbjct: 356 EILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISFS 415
Query: 329 PE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSP-DGQWVASASFDKSIK 385
P + +GS D T +W+ + T + HQ LV V F P G ++ + ++D + K
Sbjct: 416 PNGYHIATGSGDNTCKVWDLRQRRCVYT-IPAHQNLVTGVKFEPIHGDFLLTGAYDNTAK 474
Query: 386 LWNGTTGKFVAVFRGHVGPV 405
+W + GH G V
Sbjct: 475 IWTHPGWSPLKTLAGHEGKV 494
Score = 153 (58.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 51/183 (27%), Positives = 83/183 (45%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L S + D ++ LW S +P + GH V V + P G+++ + +D+S +LW+
Sbjct: 295 LASCAADGSVKLWS-LDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEA 353
Query: 392 GKFVAVFRGHVGPVYQIRFELIYCFRYPSN---FYCVVDMS---CCMSL-------Y--S 436
+ + GH VY I F F V D+ C M L Y S
Sbjct: 354 QEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGIS 413
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSP-DGEKVASGGKDRVL 495
+S + + +GS D+T KVWD+R ++ +P H + V V + P G+ + +G D
Sbjct: 414 FSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTA 473
Query: 496 KLW 498
K+W
Sbjct: 474 KIW 476
Score = 146 (56.5 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 34/136 (25%), Positives = 67/136 (49%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ +R RC + GH + + ++FSP+G +A+GSGD T ++WDL + ++ H+
Sbjct: 390 VWDLR-TGRCIMFLEGHLKEIYGISFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ 448
Query: 151 NWVLCIAWSA-DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAP 209
N V + + G L++G+ + W P L+GH+ + G+ +++
Sbjct: 449 NLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPL-KTLAGHEGKVMGLD-----ISSD 502
Query: 210 CRRFVSASKDGDARIW 225
+ + S D ++W
Sbjct: 503 GQLIATCSYDRTFKLW 518
Score = 142 (55.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 47/173 (27%), Positives = 74/173 (42%)
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
LW+ +++ GH V + F DG + D ++W+ TG+ + GH+
Sbjct: 348 LWD-LEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHL 406
Query: 403 GPVYQIRFELI-YCFRYPS-NFYCVV-DMSCCMSLYSWSADSRL-------------LLS 446
+Y I F Y S + C V D+ +Y+ A L LL+
Sbjct: 407 KEIYGISFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLT 466
Query: 447 GSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLWM 499
G+ D+T K+W + L GH +V +D S DG+ +A+ DR KLWM
Sbjct: 467 GAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWM 519
>UNIPROTKB|B3KPU1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246 EMBL:AC009488
HOGENOM:HOG000176356 HOVERGEN:HBG000188 UniGene:Hs.185172
HGNC:HGNC:4398 EMBL:AK056750 IPI:IPI00924758 SMR:B3KPU1
STRING:B3KPU1 Ensembl:ENST00000419828 Ensembl:ENST00000427895
Uniprot:B3KPU1
Length = 240
Score = 194 (73.4 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 55/207 (26%), Positives = 95/207 (45%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
R S + GHT LS D Q+ + SGDTT LWD+ T GH V+ ++
Sbjct: 34 RVSRELPGHT-GYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSL 92
Query: 159 SADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASK 218
+ DG+ VSG+ ++ WD + GH+ I +++ P N F + S
Sbjct: 93 APDGRTFVSGACDASIKLWDVRDSM-CRQTFIGHESDINAVAFFP---NGYA--FTTGSD 146
Query: 219 DGDARIWDVSLRKCVICLSGHTL--AVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIR 275
D R++D+ + ++ S + +T V + G ++ G D +W+ +G
Sbjct: 147 DATCRLFDLRADQELLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAG 206
Query: 276 ELKGHGHWVNSLALSTE-YALRTGAFD 301
L GH + V+ L ++ + A+ TG++D
Sbjct: 207 VLAGHDNRVSCLGVTDDGMAVATGSWD 233
Score = 174 (66.3 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 45/163 (27%), Positives = 79/163 (48%)
Query: 105 AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH 164
AGH+ V+S++ +PDGR SG+ D +++LWD+ GH++ + +A+ +G
Sbjct: 81 AGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYA 140
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
+GS + +D + + + H I GI+ V + R ++ D + I
Sbjct: 141 FTTGSDDATCRLFDLRADQEL--LMYSHDNIICGIT--SVAFSRSGRLLLAGYDDFNCNI 196
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVW 266
WD L+GH V+C+ DG+ + TGS D +K+W
Sbjct: 197 WDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 239
Score = 169 (64.5 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 46/186 (24%), Positives = 86/186 (46%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQ 270
+ +++S D +WD+ + + +GH+ V + DG + +G+ D +IK+W+
Sbjct: 56 QIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRD 115
Query: 271 GKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG--- 326
+ GH +N++A YA TG+ D T + + + + N I G
Sbjct: 116 SMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITS 175
Query: 327 ----NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
+ L++G DDF +W+ A+ + GH V+ + + DG VA+ S+D
Sbjct: 176 VAFSRSGRLLLAGYDDFNCNIWD-AMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDS 234
Query: 383 SIKLWN 388
+K+WN
Sbjct: 235 FLKIWN 240
Score = 141 (54.7 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 49/202 (24%), Positives = 89/202 (44%)
Query: 112 LSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT----GHKNWVLCIAWSADGKHLVS 167
++ A++P G +A G D ++ L T+ + + GH ++ C + D + + S
Sbjct: 1 MTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITS 60
Query: 168 GSKAGELQC--WDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+G+ C WD +TG+ + +GH + +S P R FVS + D ++W
Sbjct: 61 ---SGDTTCALWDIETGQQTVG-FAGHSGDVMSLSLAP-----DGRTFVSGACDASIKLW 111
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGVIYT-GSQDCTIKVWETTQGKLIRELKGHGH-- 282
DV C GH + V + +G +T GS D T ++++ + +EL + H
Sbjct: 112 DVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDL---RADQELLMYSHDN 168
Query: 283 ---WVNSLALSTEYALRTGAFD 301
+ S+A S L +D
Sbjct: 169 IICGITSVAFSRSGRLLLAGYD 190
Score = 127 (49.8 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 52/208 (25%), Positives = 89/208 (42%)
Query: 208 APCRRFVSASK-DGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGVIYTGSQDCT 262
AP FV+ D I+ + R+ + +S GHT ++C ++ D I T S D T
Sbjct: 6 APSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTT 65
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEM-KKAALER 320
+W+ G+ GH V SL+L+ + +GA D + K + + M ++ +
Sbjct: 66 CALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGH 125
Query: 321 YNKIKGNA--PE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV---NHVYFSPDGQ 373
+ I A P +GSDD T L++ ++ M H ++ V FS G+
Sbjct: 126 ESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQE--LLMYSHDNIICGITSVAFSRSGR 183
Query: 374 WVASASFDKSIKLWNGTTGKFVAVFRGH 401
+ + D + +W+ G V GH
Sbjct: 184 LLLAGYDDFNCNIWDAMKGDRAGVLAGH 211
Score = 118 (46.6 bits), Expect = 0.00019, P = 0.00019
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 428 MSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 487
+SCC L D +++ S D+T +WDI T + GH+ +V ++ +PDG
Sbjct: 46 LSCCRFL-----DDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFV 100
Query: 488 SGGKDRVLKLW 498
SG D +KLW
Sbjct: 101 SGACDASIKLW 111
Score = 113 (44.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 432 MSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGK 491
MSL S + D R +SG+ D+++K+WD+R +Q GH ++ AV + P+G +G
Sbjct: 88 MSL-SLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSD 146
Query: 492 DRVLKLW 498
D +L+
Sbjct: 147 DATCRLF 153
Score = 102 (41.0 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 23/69 (33%), Positives = 34/69 (49%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
C ++ ++S RLLL+G D +WD L GH + V + + DG VA+G
Sbjct: 171 CGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATG 230
Query: 490 GKDRVLKLW 498
D LK+W
Sbjct: 231 SWDSFLKIW 239
Score = 65 (27.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
+ GH ++ F D Q + S+ D + LW+ TG+ F GH G V +
Sbjct: 39 LPGHTGYLSCCRFLDDNQIITSSG-DTTCALWDIETGQQTVGFAGHSGDVMSL 90
Score = 44 (20.5 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 440 DSRLLLSGSKDSTLKVWD 457
D + +GS DS LK+W+
Sbjct: 223 DGMAVATGSWDSFLKIWN 240
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 210 (79.0 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 83/301 (27%), Positives = 126/301 (41%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT-GHKNWVLCIAWSADG 162
+ GH + S F+ G LASG D + LW++ + + GHK +L + WS D
Sbjct: 58 LIGHKGEIYSCKFNSYGTALASGGSDKEIFLWNVYGECINYSVLKGHKGTILELHWSTDS 117
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ + + WD G+ + H + P P S S D A
Sbjct: 118 NEIYTACTDKSIGVWDSNKGELIKR-IREHSGVVNSCC--PARRGPPL--VASGSDDRSA 172
Query: 223 RIWDVSLRKCVICLSGHTLAVT--CVKWGGDGVIYTGSQDCTIKVWET-TQGKLIRELKG 279
RI+D K L H VT C D +I TG D I+VW+ Q + L
Sbjct: 173 RIFDTR-SKGSTHLFQHKYPVTSVCFSDASDQLI-TGGIDNVIRVWDIRNQEDPLYTLAS 230
Query: 280 HGHWVNSLALSTEYA-LRTGAFDHTGK-----QYSSPEEMKKA---ALERYNK--IKGNA 328
H + S ++S + A L + + D++ K Y+ P K A + K IK +
Sbjct: 231 HQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSW 290
Query: 329 P---ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
R+ GS D +++W+ +KQ + + GH VN V F P+ +AS S DK+I
Sbjct: 291 SIDGRRIGCGSSDRQVYIWDTN-TKQLQYCLPGHSGTVNEVTFHPNEPIIASCSSDKTIY 349
Query: 386 L 386
L
Sbjct: 350 L 350
Score = 166 (63.5 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 44/183 (24%), Positives = 84/183 (45%)
Query: 215 SASKDGDARIWDVSLRKCV--ICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQG 271
S D + +W+V +C+ L GH + + W D IYT D +I VW++ +G
Sbjct: 79 SGGSDKEIFLWNV-YGECINYSVLKGHKGTILELHWSTDSNEIYTACTDKSIGVWDSNKG 137
Query: 272 KLIRELKGHGHWVNSL--ALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG--- 326
+LI+ ++ H VNS A + +G+ D + + + + + + +
Sbjct: 138 ELIKRIREHSGVVNSCCPARRGPPLVASGSDDRSARIFDTRSKGSTHLFQHKYPVTSVCF 197
Query: 327 -NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
+A ++L++G D + +W+ + P + HQ + S DG ++ S S D S K
Sbjct: 198 SDASDQLITGGIDNVIRVWDIRNQEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCK 257
Query: 386 LWN 388
+W+
Sbjct: 258 IWD 260
Score = 160 (61.4 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 47/170 (27%), Positives = 77/170 (45%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDL-NTQTPMFKCTGHKNWVLCIAWSADGKHL 165
H V SV FS QL +G D +R+WD+ N + P++ H++ + + S DG +L
Sbjct: 188 HKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQEDPLYTLASHQDTITSTSVSKDGAYL 247
Query: 166 VSGSKAGELQCWDPQTGKPSGNPL-------SGHKKWITGISWEPVHLNAPCRRFVSASK 218
+S S + WD + P + + +K + SW ++ RR S
Sbjct: 248 LSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWS---IDG--RRIGCGSS 302
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWG-GDGVIYTGSQDCTIKVWE 267
D IWD + ++ CL GH+ V V + + +I + S D TI + E
Sbjct: 303 DRQVYIWDTNTKQLQYCLPGHSGTVNEVTFHPNEPIIASCSSDKTIYLGE 352
Score = 119 (46.9 bits), Expect = 0.00035, P = 0.00035
Identities = 34/124 (27%), Positives = 56/124 (45%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFK----CTGHKNW----VL 154
T+A H + + S + S DG L S S D + ++WD+ P + G +N ++
Sbjct: 227 TLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLI 286
Query: 155 CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFV 214
+WS DG+ + GS ++ WD T K L GH + +++ P N P
Sbjct: 287 KSSWSIDGRRIGCGSSDRQVYIWDTNT-KQLQYCLPGHSGTVNEVTFHP---NEPIIASC 342
Query: 215 SASK 218
S+ K
Sbjct: 343 SSDK 346
Score = 113 (44.8 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
SWS D R + GS D + +WD T++L+ LPGH+ V V + P+ +AS D+ +
Sbjct: 289 SWSIDGRRIGCGSSDRQVYIWDTNTKQLQYCLPGHSGTVNEVTFHPNEPIIASCSSDKTI 348
Query: 496 KL 497
L
Sbjct: 349 YL 350
Score = 108 (43.1 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 37/169 (21%), Positives = 74/169 (43%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
+ + GH +L + +S D ++ + D ++ +WD N + + H V +
Sbjct: 99 SVLKGHKGTILELHWSTDSNEIYTACTDKSIGVWDSNKGELIKRIREHSGVVNSCCPARR 158
Query: 162 GKHLV-SGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
G LV SGS + +D ++ K S + L HK +T + + + ++ D
Sbjct: 159 GPPLVASGSDDRSARIFDTRS-KGSTH-LFQHKYPVTSVCFSDAS-----DQLITGGIDN 211
Query: 221 DARIWDVSLRKCVI-CLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
R+WD+ ++ + L+ H +T DG + + S D + K+W+
Sbjct: 212 VIRVWDIRNQEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWD 260
Score = 101 (40.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 40/154 (25%), Positives = 64/154 (41%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPE- 311
V+ GS D T + + +++ G G + L TE RT +H Q +
Sbjct: 12 VLVNGSNDTTPNKKQKNELQVVSS--GGGR---EIILGTE---RTSKLEHPIMQLIGHKG 63
Query: 312 EMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPD 371
E+ Y G A L SG D +FLW + + GH+ + +++S D
Sbjct: 64 EIYSCKFNSY----GTA---LASGGSDKEIFLWNVYGECINYSVLKGHKGTILELHWSTD 116
Query: 372 GQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPV 405
+ +A DKSI +W+ G+ + R H G V
Sbjct: 117 SNEIYTACTDKSIGVWDSNKGELIKRIREHSGVV 150
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 238 (88.8 bits), Expect = 6.6e-17, P = 6.6e-17
Identities = 90/296 (30%), Positives = 138/296 (46%)
Query: 99 RC-SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
RC ++GH++ V+ + + LASGS D T+RLW+L T + GH + V C+
Sbjct: 263 RCRQVVLSGHSDGVMCLQLVRN--ILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQ 320
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+ D L+SGS ++ W+ +T + + L GH + ++++ L VS S
Sbjct: 321 F--DQCKLISGSMDKTIRIWNYRTSECI-SILHGHTDSVLCLTFDSTLL-------VSGS 370
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRE 276
D ++W S K I L GHT V V+ D G++ +GS D TIK+W +
Sbjct: 371 ADCTVKLWHFSGGKR-ITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHT 429
Query: 277 LKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGN---APE--R 331
H V SLAL+ + L + + D T KQ+ E KK + I+G A + R
Sbjct: 430 FSAHIGPVQSLALA-DSRLFSCSLDGTIKQWDI--EKKKCVHTLFGHIEGVWEIAADHLR 486
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
L+SG+ D + +WE + H + V V D + V S S D I LW
Sbjct: 487 LISGAHDGVVKVWEACECVHT---LKNHSEPVTSVALG-DCE-VVSGSEDGKIYLW 537
Score = 210 (79.0 bits), Expect = 8.5e-14, P = 8.5e-14
Identities = 79/281 (28%), Positives = 128/281 (45%)
Query: 234 ICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEY 293
+ LSGH+ V C++ + ++ +GS D TI++W + + L+GH V L +
Sbjct: 267 VVLSGHSDGVMCLQLVRN-ILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFD-QC 324
Query: 294 ALRTGAFDHTGK--QYSSPE--EMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVS 349
L +G+ D T + Y + E + + + ++ LVSGS D T+ LW +
Sbjct: 325 KLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDST-LLVSGSADCTVKLWHFSGG 383
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
K+ R GH VN V D V S S D +IK+W+ T + F H+GPV +
Sbjct: 384 KRITLR--GHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLA 441
Query: 410 F---ELIYCFRYPS-NFYCVVDMSCCMSLYS-----W--SADSRLLLSGSKDSTLKVWDI 458
L C + + + C +L+ W +AD L+SG+ D +KVW+
Sbjct: 442 LADSRLFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIAADHLRLISGAHDGVVKVWE- 500
Query: 459 RTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLWM 499
+ L H++ V +V D E V SG +D + LW+
Sbjct: 501 -ACECVHTLKNHSEPVTSVALG-DCE-VVSGSEDGKIYLWL 538
Score = 182 (69.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 58/193 (30%), Positives = 89/193 (46%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
+ C + + GHT++VL + F D L SGS D TV+LW + + GH V +
Sbjct: 343 SECISILHGHTDSVLCLTF--DSTLLVSGSADCTVKLWHFSGGKRI-TLRGHTGPVNSVR 399
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
D ++SGS ++ W +T + S H + ++ A R F S S
Sbjct: 400 IIRDRGLVLSGSDDSTIKIWSLETNTCL-HTFSAHIGPVQSLAL------ADSRLF-SCS 451
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRE 276
DG + WD+ +KCV L GH V + D + + +G+ D +KVWE + +
Sbjct: 452 LDGTIKQWDIEKKKCVHTLFGHIEGVWEI--AADHLRLISGAHDGVVKVWEACE--CVHT 507
Query: 277 LKGHGHWVNSLAL 289
LK H V S+AL
Sbjct: 508 LKNHSEPVTSVAL 520
>UNIPROTKB|F1RKU4 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GeneTree:ENSGT00700000104507
GO:GO:0055087 EMBL:CU467054 Ensembl:ENSSSCT00000001963 OMA:PPSEVWG
Uniprot:F1RKU4
Length = 287
Score = 215 (80.7 bits), Expect = 7.6e-17, P = 7.6e-17
Identities = 51/158 (32%), Positives = 84/158 (53%)
Query: 111 VLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
+LS+A+SPDG+ LASG+ D + ++D+ T + GH + + +S D + LV+ S
Sbjct: 133 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 192
Query: 171 AGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR 230
G ++ +D Q +G LSGH W+ +++ P + FVS+S D ++WDV R
Sbjct: 193 DGYIKIYDVQHANLAGT-LSGHASWVLNVAFCPDDTH-----FVSSSSDKSVKVWDVGTR 246
Query: 231 KCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWE 267
CV H V VK+ G+G I + D I +++
Sbjct: 247 TCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 284
Score = 177 (67.4 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 52/164 (31%), Positives = 84/164 (51%)
Query: 105 AGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKH 164
AG +A ++AFSPD + LA+G+ V ++ + + + ++L IA+S DGK+
Sbjct: 86 AGPVDA-WTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKY 144
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
L SG+ G + +D TGK + L GH I +++ P + V+AS DG +I
Sbjct: 145 LASGAIDGIINIFDIATGKLL-HTLEGHAMPIRSLTFSP-----DSQLLVTASDDGYIKI 198
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWE 267
+DV LSGH V V + D + + S D ++KVW+
Sbjct: 199 YDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 242
Score = 168 (64.2 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 50/180 (27%), Positives = 85/180 (47%)
Query: 112 LSVAFSPDGRQLASGSGDTTVRLWDLNT--QTPMFKCTGHKNWVLCIAWSADGKHLVSGS 169
L + +S +G QL G +VRLWDL Q W L A+S D ++L +G+
Sbjct: 54 LDLQWSLEGHQL----GVVSVRLWDLENGKQIKSIDAGPVDAWTL--AFSPDSQYLATGT 107
Query: 170 KAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSL 229
G++ + ++GK + L K+I I++ P + S + DG I+D++
Sbjct: 108 HVGKVNIFGVESGKKEYS-LDTRGKFILSIAYSP-----DGKYLASGAIDGIINIFDIAT 161
Query: 230 RKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLA 288
K + L GH + + + + D ++ T S D IK+++ L L GH WV ++A
Sbjct: 162 GKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVA 221
Score = 164 (62.8 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 65/280 (23%), Positives = 124/280 (44%)
Query: 239 HTLAVTCVKWG-----GDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEY 293
H A+ V WG + TGS D +KVW+ KL + GH + +++
Sbjct: 15 HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSV---- 70
Query: 294 ALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPK 353
R ++ GKQ S + ++ + + L +G+ + ++ K+
Sbjct: 71 --RLWDLEN-GKQIKS---IDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEY 124
Query: 354 TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF--- 410
+ T + +++ Y SPDG+++AS + D I +++ TGK + GH P+ + F
Sbjct: 125 SLDTRGKFILSIAY-SPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPD 183
Query: 411 -ELIYCFRYPS--NFYCV--VDMSCCMSLY-SW------SADSRLLLSGSKDSTLKVWDI 458
+L+ Y V +++ +S + SW D +S S D ++KVWD+
Sbjct: 184 SQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDV 243
Query: 459 RTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
T+ H D+V+ V ++ +G K+ S G D+ + ++
Sbjct: 244 GTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 283
Score = 147 (56.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 34/124 (27%), Positives = 59/124 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH + S+ FSPD + L + S D ++++D+ +GH +WVL +A+ D
Sbjct: 167 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD 226
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
H VS S ++ WD T + + H+ + G+ + N + VS D +
Sbjct: 227 THFVSSSSDKSVKVWDVGT-RTCVHTFFDHQDQVWGVKY-----NGNGSKIVSVGDDQEI 280
Query: 223 RIWD 226
I+D
Sbjct: 281 HIYD 284
Score = 130 (50.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 26/88 (29%), Positives = 49/88 (55%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
++ ++ N + T++GH VL+VAF PD S S D +V++WD+ T+T + H+
Sbjct: 198 IYDVQHAN-LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQ 256
Query: 151 NWVLCIAWSADGKHLVSGSKAGELQCWD 178
+ V + ++ +G +VS E+ +D
Sbjct: 257 DQVWGVKYNGNGSKIVSVGDDQEIHIYD 284
>UNIPROTKB|Q5REE6 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9601 "Pongo abelii" [GO:0000463 "maturation of LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 HSSP:P16649
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:LQTRFFT HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:CR857583 RefSeq:NP_001124867.1 UniGene:Pab.3253
ProteinModelPortal:Q5REE6 Ensembl:ENSPPYT00000015218
GeneID:100171729 KEGG:pon:100171729 InParanoid:Q5REE6
Uniprot:Q5REE6
Length = 423
Score = 233 (87.1 bits), Expect = 8.9e-17, P = 8.9e-17
Identities = 54/161 (33%), Positives = 85/161 (52%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GH EAV SV +S D ++ S S D T+R+WD+ + + TG+K + CI++S
Sbjct: 252 TLSGHMEAVSSVLWS-DAEEICSASWDHTIRVWDVESGSLKSTLTGNKVFN-CISYSPLC 309
Query: 163 KHLVSGSKAGELQCWDPQT--GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
K L SGS ++ WDP+T G L+ H W+T + W P H ++ +S S D
Sbjct: 310 KRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHE----QQLISGSLDN 365
Query: 221 DARIWDV-SLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQD 260
++WD S + + L+ H V V W G++ +G D
Sbjct: 366 IVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGAD 406
Score = 182 (69.1 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 66/234 (28%), Positives = 111/234 (47%)
Query: 280 HGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPER-------L 332
H W++S+ + E+ L TG++D T + +S + + + +K A + L
Sbjct: 100 HDDWISSIKGAEEWIL-TGSYDKTSRIWSLEGKSIMTIVGHTDVVKDVAWVKKDSLSCLL 158
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRM---TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
+S S D T+ LWE V + + GH V+ + G S S+DK +K+W+
Sbjct: 159 LSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDGSGTKFCSGSWDKMLKIWST 218
Query: 390 T-TGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYS---WSADSRLLL 445
T + + P + + E + R P VV +S M S WS D+ +
Sbjct: 219 VPTDEEDEMEESTNRPRKKQKTEQLGLTRTP-----VVTLSGHMEAVSSVLWS-DAEEIC 272
Query: 446 SGSKDSTLKVWDIRTQKLKQDLPGHADEVF-AVDWSPDGEKVASGGKDRVLKLW 498
S S D T++VWD+ + LK L G+ +VF + +SP +++ASG DR ++LW
Sbjct: 273 SASWDHTIRVWDVESGSLKSTLTGN--KVFNCISYSPLCKRLASGSTDRHIRLW 324
Score = 169 (64.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 54/176 (30%), Positives = 86/176 (48%)
Query: 139 TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG 198
T+TP+ +GH V + WS D + + S S ++ WD ++G L+G+K +
Sbjct: 246 TRTPVVTLSGHMEAVSSVLWS-DAEEICSASWDHTIRVWDVESGSLKST-LTGNKVF-NC 302
Query: 199 ISWEPVHLNAPCRRFVSASKDGDARIWDVSLRK-CVICLS--GHTLAVTCVKWGG--DGV 253
IS+ P+ C+R S S D R+WD + ++ LS HT VT VKW +
Sbjct: 303 ISYSPL-----CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 357
Query: 254 IYTGSQDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS 308
+ +GS D +K+W+T K + +L H V S+ + L +G D+ K YS
Sbjct: 358 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADN--KLYS 411
Score = 154 (59.3 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 64/274 (23%), Positives = 122/274 (44%)
Query: 145 KCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV 204
+C H +W+ I + + +++GS + W + GK S + GH + ++W V
Sbjct: 96 QCMFHDDWISSIKGAEEW--ILTGSYDKTSRIWSLE-GK-SIMTIVGHTDVVKDVAW--V 149
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLR----KCVICLSGHTLAVTCVKWGGDGVIY-TGSQ 259
++ +SAS D +W+ ++ K + C GH +V + G G + +GS
Sbjct: 150 KKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDGSGTKFCSGSW 209
Query: 260 DCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALE 319
D +K+W T E++ ST + + G +P +E
Sbjct: 210 DKMLKIWSTVPTDEEDEMEE----------STNRPRKKQKTEQLGLT-RTPVVTLSGHME 258
Query: 320 RYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+ + + E + S S D T+ +W+ S K+ +TG++ + N + +SP + +AS S
Sbjct: 259 AVSSVLWSDAEEICSASWDHTIRVWD-VESGSLKSTLTGNK-VFNCISYSPLCKRLASGS 316
Query: 380 FDKSIKLWNGTT--GKFVAV-FRGHVGPVYQIRF 410
D+ I+LW+ T G V++ H G V +++
Sbjct: 317 TDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Score = 136 (52.9 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMF---KCTGHKNWVLCIAW 158
+T+ G+ + +++SP ++LASGS D +RLWD T+ T H WV + W
Sbjct: 292 STLTGN-KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Query: 159 S-ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
S + L+SGS ++ WD ++ K L+ H+ + + W
Sbjct: 351 SPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDW 394
Score = 117 (46.2 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 54/210 (25%), Positives = 90/210 (42%)
Query: 26 PMYFPQNAGPQQLSQIVNKLLN--NE--EKLPYAFYISDHELLVPLGSYLEKHKVSVEKV 81
P P + LS I+NKLL NE + + + F I L +PL ++E +S E+V
Sbjct: 21 PFSIPAASEIADLSNIINKLLKDKNEFHKHVEFDFLIKGQFLRMPLDKHMEMENISSEEV 80
Query: 82 LSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
+ I Y + + +C H + + S+ + + + +GS D T R+W L ++
Sbjct: 81 VEIEYVEK--YTAPQPEQCMF----HDDWISSIKGAEEW--ILTGSYDKTSRIWSLEGKS 132
Query: 142 PMFKCTGHKNWVLCIAW-SADGKH--LVSGSKAGELQCWDPQTGKPSGNPLS---GHKKW 195
M GH + V +AW D L+S S + W+ + L GH
Sbjct: 133 IM-TIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGH--- 188
Query: 196 ITGISWEPVHLNAPCRRFVSASKDGDARIW 225
G S + + ++ +F S S D +IW
Sbjct: 189 -AG-SVDSIAVDGSGTKFCSGSWDKMLKIW 216
Score = 113 (44.8 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 26/61 (42%), Positives = 36/61 (59%)
Query: 437 WS-ADSRLLLSGSKDSTLKVWDIRTQKLK-QDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
WS + L+SGS D+ +K+WD R+ K DL H D+V +VDW+ G + SGG D
Sbjct: 350 WSPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTG-LLLSGGADNK 408
Query: 495 L 495
L
Sbjct: 409 L 409
Score = 106 (42.4 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 42/163 (25%), Positives = 74/163 (45%)
Query: 230 RKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL 289
R V+ LSGH AV+ V W I + S D TI+VW+ G L L G+ + N ++
Sbjct: 247 RTPVVTLSGHMEAVSSVLWSDAEEICSASWDHTIRVWDVESGSLKSTLTGNKVF-NCISY 305
Query: 290 STEYA-LRTGAFDHTGKQY---SSPEEMKKAALERYN----KIKGNAP--ERLVSGSDDF 339
S L +G+ D + + + + +L + +K + ++L+SGS D
Sbjct: 306 SPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDN 365
Query: 340 TMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
+ LW+ K P + H+ V V ++ G ++ + +K
Sbjct: 366 IVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNK 408
Score = 105 (42.0 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQK---LKQDLPGHADEVFAVDWSPDGEK-VASGGK 491
S+S + L SGS D +++WD RT+ + L H V +V WSP E+ + SG
Sbjct: 304 SYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSL 363
Query: 492 DRVLKLW 498
D ++KLW
Sbjct: 364 DNIVKLW 370
Score = 102 (41.0 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 36/120 (30%), Positives = 55/120 (45%)
Query: 277 LKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG---NAP--ER 331
L GH V+S+ S + + ++DHT + + K+ L NK+ +P +R
Sbjct: 253 LSGHMEAVSSVLWSDAEEICSASWDHTIRVWDVESGSLKSTLTG-NKVFNCISYSPLCKR 311
Query: 332 LVSGSDDFTMFLWEPAVSKQP--KTRMTGHQQLVNHVYFSPDG-QWVASASFDKSIKLWN 388
L SGS D + LW+P +T H V V +SP Q + S S D +KLW+
Sbjct: 312 LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWD 371
>UNIPROTKB|Q9GZL7 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9606 "Homo sapiens" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IC] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0070545 "PeBoW complex" evidence=IDA] [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 CTD:55759 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:AF242546 EMBL:AK001743 EMBL:AK022781 EMBL:AK022782
EMBL:AK056092 EMBL:BC008082 IPI:IPI00304232 RefSeq:NP_060726.3
UniGene:Hs.73291 ProteinModelPortal:Q9GZL7 SMR:Q9GZL7 IntAct:Q9GZL7
STRING:Q9GZL7 PhosphoSite:Q9GZL7 DMDM:20140802 SWISS-2DPAGE:Q9GZL7
PaxDb:Q9GZL7 PeptideAtlas:Q9GZL7 PRIDE:Q9GZL7 DNASU:55759
Ensembl:ENST00000261015 GeneID:55759 KEGG:hsa:55759 UCSC:uc002uzl.3
GeneCards:GC02M203709 HGNC:HGNC:14098 HPA:HPA036389
neXtProt:NX_Q9GZL7 PharmGKB:PA37841 InParanoid:Q9GZL7
PhylomeDB:Q9GZL7 GenomeRNAi:55759 NextBio:60775 ArrayExpress:Q9GZL7
Bgee:Q9GZL7 CleanEx:HS_WDR12 Genevestigator:Q9GZL7
GermOnline:ENSG00000138442 Uniprot:Q9GZL7
Length = 423
Score = 233 (87.1 bits), Expect = 8.9e-17, P = 8.9e-17
Identities = 54/161 (33%), Positives = 85/161 (52%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GH EAV SV +S D ++ S S D T+R+WD+ + + TG+K + CI++S
Sbjct: 252 TLSGHMEAVSSVLWS-DAEEICSASWDHTIRVWDVESGSLKSTLTGNKVFN-CISYSPLC 309
Query: 163 KHLVSGSKAGELQCWDPQT--GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
K L SGS ++ WDP+T G L+ H W+T + W P H ++ +S S D
Sbjct: 310 KRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHE----QQLISGSLDN 365
Query: 221 DARIWDV-SLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQD 260
++WD S + + L+ H V V W G++ +G D
Sbjct: 366 IVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGAD 406
Score = 181 (68.8 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 65/234 (27%), Positives = 111/234 (47%)
Query: 280 HGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPER-------L 332
H W++S+ + E+ L TG++D T + +S + + + +K A + L
Sbjct: 100 HDDWISSIKGAEEWIL-TGSYDKTSRIWSLEGKSIMTIVGHTDVVKDVAWVKKDSLSCLL 158
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRM---TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
+S S D T+ LWE V + + GH V+ + G S S+DK +K+W+
Sbjct: 159 LSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDGSGTKFCSGSWDKMLKIWST 218
Query: 390 T-TGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYS---WSADSRLLL 445
T + + P + + E + R P +V +S M S WS D+ +
Sbjct: 219 VPTDEEDEMEESTNRPRKKQKTEQLGLTRTP-----IVTLSGHMEAVSSVLWS-DAEEIC 272
Query: 446 SGSKDSTLKVWDIRTQKLKQDLPGHADEVF-AVDWSPDGEKVASGGKDRVLKLW 498
S S D T++VWD+ + LK L G+ +VF + +SP +++ASG DR ++LW
Sbjct: 273 SASWDHTIRVWDVESGSLKSTLTGN--KVFNCISYSPLCKRLASGSTDRHIRLW 324
Score = 169 (64.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 54/176 (30%), Positives = 86/176 (48%)
Query: 139 TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG 198
T+TP+ +GH V + WS D + + S S ++ WD ++G L+G+K +
Sbjct: 246 TRTPIVTLSGHMEAVSSVLWS-DAEEICSASWDHTIRVWDVESGSLKST-LTGNKVF-NC 302
Query: 199 ISWEPVHLNAPCRRFVSASKDGDARIWDVSLRK-CVICLS--GHTLAVTCVKWGG--DGV 253
IS+ P+ C+R S S D R+WD + ++ LS HT VT VKW +
Sbjct: 303 ISYSPL-----CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 357
Query: 254 IYTGSQDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS 308
+ +GS D +K+W+T K + +L H V S+ + L +G D+ K YS
Sbjct: 358 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADN--KLYS 411
Score = 153 (58.9 bits), Expect = 4.3e-15, Sum P(2) = 4.3e-15
Identities = 64/274 (23%), Positives = 122/274 (44%)
Query: 145 KCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV 204
+C H +W+ I + + +++GS + W + GK S + GH + ++W V
Sbjct: 96 QCMFHDDWISSIKGAEEW--ILTGSYDKTSRIWSLE-GK-SIMTIVGHTDVVKDVAW--V 149
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLR----KCVICLSGHTLAVTCVKWGGDGVIY-TGSQ 259
++ +SAS D +W+ ++ K + C GH +V + G G + +GS
Sbjct: 150 KKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDGSGTKFCSGSW 209
Query: 260 DCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALE 319
D +K+W T E++ ST + + G +P +E
Sbjct: 210 DKMLKIWSTVPTDEEDEMEE----------STNRPRKKQKTEQLGLT-RTPIVTLSGHME 258
Query: 320 RYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+ + + E + S S D T+ +W+ S K+ +TG++ + N + +SP + +AS S
Sbjct: 259 AVSSVLWSDAEEICSASWDHTIRVWD-VESGSLKSTLTGNK-VFNCISYSPLCKRLASGS 316
Query: 380 FDKSIKLWNGTT--GKFVAV-FRGHVGPVYQIRF 410
D+ I+LW+ T G V++ H G V +++
Sbjct: 317 TDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Score = 136 (52.9 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMF---KCTGHKNWVLCIAW 158
+T+ G+ + +++SP ++LASGS D +RLWD T+ T H WV + W
Sbjct: 292 STLTGN-KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Query: 159 S-ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
S + L+SGS ++ WD ++ K L+ H+ + + W
Sbjct: 351 SPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDW 394
Score = 117 (46.2 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 54/210 (25%), Positives = 90/210 (42%)
Query: 26 PMYFPQNAGPQQLSQIVNKLLN--NE--EKLPYAFYISDHELLVPLGSYLEKHKVSVEKV 81
P P + LS I+NKLL NE + + + F I L +PL ++E +S E+V
Sbjct: 21 PFSIPAASEIADLSNIINKLLKDKNEFHKHVEFDFLIKGQFLRMPLDKHMEMENISSEEV 80
Query: 82 LSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
+ I Y + + +C H + + S+ + + + +GS D T R+W L ++
Sbjct: 81 VEIEYVEK--YTAPQPEQCMF----HDDWISSIKGAEEW--ILTGSYDKTSRIWSLEGKS 132
Query: 142 PMFKCTGHKNWVLCIAW-SADGKH--LVSGSKAGELQCWDPQTGKPSGNPLS---GHKKW 195
M GH + V +AW D L+S S + W+ + L GH
Sbjct: 133 IM-TIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGH--- 188
Query: 196 ITGISWEPVHLNAPCRRFVSASKDGDARIW 225
G S + + ++ +F S S D +IW
Sbjct: 189 -AG-SVDSIAVDGSGTKFCSGSWDKMLKIW 216
Score = 113 (44.8 bits), Expect = 4.3e-15, Sum P(2) = 4.3e-15
Identities = 26/61 (42%), Positives = 36/61 (59%)
Query: 437 WS-ADSRLLLSGSKDSTLKVWDIRTQKLK-QDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
WS + L+SGS D+ +K+WD R+ K DL H D+V +VDW+ G + SGG D
Sbjct: 350 WSPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTG-LLLSGGADNK 408
Query: 495 L 495
L
Sbjct: 409 L 409
Score = 105 (42.0 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQK---LKQDLPGHADEVFAVDWSPDGEK-VASGGK 491
S+S + L SGS D +++WD RT+ + L H V +V WSP E+ + SG
Sbjct: 304 SYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSL 363
Query: 492 DRVLKLW 498
D ++KLW
Sbjct: 364 DNIVKLW 370
Score = 105 (42.0 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 41/163 (25%), Positives = 74/163 (45%)
Query: 230 RKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL 289
R ++ LSGH AV+ V W I + S D TI+VW+ G L L G+ + N ++
Sbjct: 247 RTPIVTLSGHMEAVSSVLWSDAEEICSASWDHTIRVWDVESGSLKSTLTGNKVF-NCISY 305
Query: 290 STEYA-LRTGAFDHTGKQY---SSPEEMKKAALERYN----KIKGNAP--ERLVSGSDDF 339
S L +G+ D + + + + +L + +K + ++L+SGS D
Sbjct: 306 SPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDN 365
Query: 340 TMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
+ LW+ K P + H+ V V ++ G ++ + +K
Sbjct: 366 IVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNK 408
Score = 102 (41.0 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 36/120 (30%), Positives = 55/120 (45%)
Query: 277 LKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG---NAP--ER 331
L GH V+S+ S + + ++DHT + + K+ L NK+ +P +R
Sbjct: 253 LSGHMEAVSSVLWSDAEEICSASWDHTIRVWDVESGSLKSTLTG-NKVFNCISYSPLCKR 311
Query: 332 LVSGSDDFTMFLWEPAVSKQP--KTRMTGHQQLVNHVYFSPDG-QWVASASFDKSIKLWN 388
L SGS D + LW+P +T H V V +SP Q + S S D +KLW+
Sbjct: 312 LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWD 371
>RGD|735072 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10116 "Rattus
norvegicus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO;ISS]
[GO:0007219 "Notch signaling pathway" evidence=IEA;ISO] [GO:0008283
"cell proliferation" evidence=ISO;ISS] [GO:0030687 "preribosome,
large subunit precursor" evidence=ISO;ISS] [GO:0070545 "PeBoW
complex" evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:735072 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC063180 IPI:IPI00400751
RefSeq:NP_955442.1 UniGene:Rn.106890 ProteinModelPortal:P61480
STRING:P61480 PRIDE:P61480 Ensembl:ENSRNOT00000023463 GeneID:363237
KEGG:rno:363237 UCSC:RGD:735072 InParanoid:P61480 NextBio:682950
Genevestigator:P61480 GermOnline:ENSRNOG00000017340 Uniprot:P61480
Length = 423
Score = 233 (87.1 bits), Expect = 8.9e-17, P = 8.9e-17
Identities = 55/161 (34%), Positives = 85/161 (52%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GHTEA+ SV +S D ++ S S D TVR+WD+ + TG+K + CI++S
Sbjct: 252 TLSGHTEAISSVLWS-DADEVCSASWDHTVRVWDVESGGLKSTLTGNKVFN-CISYSPLC 309
Query: 163 KHLVSGSKAGELQCWDPQT--GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
K L SGS ++ WDP+T G L+ H W+T + W P H ++ +S S D
Sbjct: 310 KRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTH----DQQLISGSLDN 365
Query: 221 DARIWDV-SLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQD 260
++WD S + + L+ H V V W G++ +G D
Sbjct: 366 MVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGAD 406
Score = 167 (63.8 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 54/176 (30%), Positives = 85/176 (48%)
Query: 139 TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG 198
T+TP+ +GH + + WS D + S S ++ WD ++G L+G+K +
Sbjct: 246 TRTPLVTLSGHTEAISSVLWS-DADEVCSASWDHTVRVWDVESGGLKST-LTGNKVF-NC 302
Query: 199 ISWEPVHLNAPCRRFVSASKDGDARIWDVSLRK-CVICLS--GHTLAVTCVKWGG--DGV 253
IS+ P+ C+R S S D R+WD + ++ LS HT VT VKW D
Sbjct: 303 ISYSPL-----CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHDQQ 357
Query: 254 IYTGSQDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS 308
+ +GS D +K+W+T K + +L H V S+ + L +G D+ K YS
Sbjct: 358 LISGSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADN--KLYS 411
Score = 164 (62.8 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 59/231 (25%), Positives = 109/231 (47%)
Query: 280 HGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPER-------L 332
H W++S+ + E+ L +G++D T + +S + + + +K A + L
Sbjct: 100 HDDWISSIKGAEEWIL-SGSYDKTSRIWSLEGKSIMTIVGHTDVVKDVAWVKKDSLSCLL 158
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRM---TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
++ S D T+ LWE + + + GH V+ + G S S+DK +K+W+
Sbjct: 159 LTASMDQTILLWEWNIERNKVKALHCCRGHAGSVDAIAVDSSGTKFCSGSWDKMLKIWST 218
Query: 390 T-TGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGS 448
T + + P + + E + R P + + +S WS D+ + S S
Sbjct: 219 VPTDEEDEIQEPTNRPRKKQKTEQLGLTRTP--LVTLSGHTEAISSVLWS-DADEVCSAS 275
Query: 449 KDSTLKVWDIRTQKLKQDLPGHADEVF-AVDWSPDGEKVASGGKDRVLKLW 498
D T++VWD+ + LK L G+ +VF + +SP +++ASG DR ++LW
Sbjct: 276 WDHTVRVWDVESGGLKSTLTGN--KVFNCISYSPLCKRLASGSTDRHIRLW 324
Score = 138 (53.6 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMF---KCTGHKNWVLCIAW 158
+T+ G+ + +++SP ++LASGS D +RLWD T+ T H WV + W
Sbjct: 292 STLTGN-KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Query: 159 S-ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
S + L+SGS ++ WD ++ K L+ H+ + + W
Sbjct: 351 SPTHDQQLISGSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDW 394
Score = 135 (52.6 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 62/275 (22%), Positives = 121/275 (44%)
Query: 145 KCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV 204
+C H +W+ I + + ++SGS + W + GK S + GH + ++W V
Sbjct: 96 QCMFHDDWISSIKGAEEW--ILSGSYDKTSRIWSLE-GK-SIMTIVGHTDVVKDVAW--V 149
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLR----KCVICLSGHTLAVTCVKWGGDGVIY-TGSQ 259
++ ++AS D +W+ ++ K + C GH +V + G + +GS
Sbjct: 150 KKDSLSCLLLTASMDQTILLWEWNIERNKVKALHCCRGHAGSVDAIAVDSSGTKFCSGSW 209
Query: 260 DCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAAL 318
D +K+W T E++ + + + L RT +G
Sbjct: 210 DKMLKIWSTVPTDEEDEIQEPTNRPRKKQKTEQLGLTRTPLVTLSGHT------------ 257
Query: 319 ERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASA 378
E + + + + + S S D T+ +W+ S K+ +TG++ + N + +SP + +AS
Sbjct: 258 EAISSVLWSDADEVCSASWDHTVRVWD-VESGGLKSTLTGNK-VFNCISYSPLCKRLASG 315
Query: 379 SFDKSIKLWNGTT--GKFVAV-FRGHVGPVYQIRF 410
S D+ I+LW+ T G V++ H G V +++
Sbjct: 316 STDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Score = 115 (45.5 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 52/210 (24%), Positives = 90/210 (42%)
Query: 26 PMYFPQNAGPQQLSQIVNKLLNNEEKL----PYAFYISDHELLVPLGSYLEKHKVSVEKV 81
P P + LS I+NKLL + +L + F I L +PL ++E +S E+V
Sbjct: 21 PFSIPATSEVADLSNIINKLLETKNELHKHVEFDFLIKGQFLRMPLVKHMELEDISSEEV 80
Query: 82 LSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
+ + Y + + +C H + + S+ + + + SGS D T R+W L ++
Sbjct: 81 VELEYVEK--YTAPQPEQCMF----HDDWISSIKGAEEW--ILSGSYDKTSRIWSLEGKS 132
Query: 142 PMFKCTGHKNWVLCIAW-SADGKH--LVSGSKAGELQCWDPQTGKPSGNPLS---GHKKW 195
M GH + V +AW D L++ S + W+ + L GH
Sbjct: 133 IM-TIVGHTDVVKDVAWVKKDSLSCLLLTASMDQTILLWEWNIERNKVKALHCCRGH--- 188
Query: 196 ITGISWEPVHLNAPCRRFVSASKDGDARIW 225
G S + + +++ +F S S D +IW
Sbjct: 189 -AG-SVDAIAVDSSGTKFCSGSWDKMLKIW 216
Score = 113 (44.8 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 26/61 (42%), Positives = 36/61 (59%)
Query: 437 WS-ADSRLLLSGSKDSTLKVWDIRTQKLK-QDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
WS + L+SGS D+ +K+WD R+ K DL H D+V +VDW+ G + SGG D
Sbjct: 350 WSPTHDQQLISGSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTG-LLLSGGADNK 408
Query: 495 L 495
L
Sbjct: 409 L 409
Score = 105 (42.0 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 39/163 (23%), Positives = 75/163 (46%)
Query: 230 RKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL 289
R ++ LSGHT A++ V W + + S D T++VW+ G L L G+ + N ++
Sbjct: 247 RTPLVTLSGHTEAISSVLWSDADEVCSASWDHTVRVWDVESGGLKSTLTGNKVF-NCISY 305
Query: 290 STEYA-LRTGAFDHTGKQY---SSPEEMKKAALERYN----KIKGNAP--ERLVSGSDDF 339
S L +G+ D + + + + +L + +K + ++L+SGS D
Sbjct: 306 SPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHDQQLISGSLDN 365
Query: 340 TMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
+ LW+ K P + H+ V V ++ G ++ + +K
Sbjct: 366 MVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNK 408
Score = 101 (40.6 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQK---LKQDLPGHADEVFAVDWSPD-GEKVASGGK 491
S+S + L SGS D +++WD RT+ + L H V +V WSP +++ SG
Sbjct: 304 SYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHDQQLISGSL 363
Query: 492 DRVLKLW 498
D ++KLW
Sbjct: 364 DNMVKLW 370
Score = 101 (40.6 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 35/120 (29%), Positives = 55/120 (45%)
Query: 277 LKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG---NAP--ER 331
L GH ++S+ S + + ++DHT + + K+ L NK+ +P +R
Sbjct: 253 LSGHTEAISSVLWSDADEVCSASWDHTVRVWDVESGGLKSTLTG-NKVFNCISYSPLCKR 311
Query: 332 LVSGSDDFTMFLWEPAVSKQP--KTRMTGHQQLVNHVYFSPD-GQWVASASFDKSIKLWN 388
L SGS D + LW+P +T H V V +SP Q + S S D +KLW+
Sbjct: 312 LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHDQQLISGSLDNMVKLWD 371
>UNIPROTKB|J9NS21 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
RefSeq:XP_003432082.1 ProteinModelPortal:J9NS21
Ensembl:ENSCAFT00000049144 GeneID:482620 KEGG:cfa:482620
Uniprot:J9NS21
Length = 1250
Score = 173 (66.0 bits), Expect = 9.2e-17, Sum P(2) = 9.2e-17
Identities = 45/190 (23%), Positives = 90/190 (47%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
N + HT+AV FS DG+++AS D T++++ T + + H++ VLC A
Sbjct: 606 NLSRLVVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCA 665
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+S D + + + S +++ W+ TG + H + + + N+ +AS
Sbjct: 666 FSTDDRFIATCSVDKKVKIWNSMTGGLV-HVYDEHSEQVNCCHFTN---NSHYLLLATAS 721
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRE 276
D ++WD++ ++C + GHT +V ++ D + S D T+K+W+ +
Sbjct: 722 SDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANERKS 781
Query: 277 LKGHGHWVNS 286
+ ++NS
Sbjct: 782 INVKQFFLNS 791
Score = 170 (64.9 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 58/185 (31%), Positives = 83/185 (44%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL----- 154
C T+ GHT +V FSPD + LAS S D T++LWD+ + K K + L
Sbjct: 736 CRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANER-KSINVKQFFLNSEEP 794
Query: 155 ---------CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
C +WSADG ++ +K ++ +D TG +GH I + P +
Sbjct: 795 QEDMEVIVKCCSWSADGTRIMVAAK-NKIFLFDIHTGGLLAEIHTGHHSTIQYCDFSPQN 853
Query: 206 LNAPCRRFVSASKDGDARIWDV-SLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTI 263
A V A +W++ S K C GH V CV + DG + T S D TI
Sbjct: 854 HLA-----VVALSQCCVELWNMDSCLKVADC-RGHLSWVHCVMFSPDGSSFLTSSDDQTI 907
Query: 264 KVWET 268
++WET
Sbjct: 908 RLWET 912
Score = 165 (63.1 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 54/212 (25%), Positives = 92/212 (43%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
NR + GH + V + F+ DG+ L S S D+++++W+ ++ +F H+ V
Sbjct: 994 NRIFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYVF-LQAHQETVKDFK 1052
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+ K L+S S G ++ W TG+ + + H+ + P +F S S
Sbjct: 1053 LLKNSK-LLSWSFDGTVKIWSIITGRIEKDFVC-HQDTVLSCDISP-----DATKFSSTS 1105
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRE 276
D A+IW L + L GH V C + D + TG + I++W + G+L+
Sbjct: 1106 ADKTAKIWSFELLSPLHELRGHKGCVRCSVFSVDSTLLATGDDNGEIRIWNVSNGELLHL 1165
Query: 277 L------KG---HGHWVNSLALSTEYALRTGA 299
+G HG WV L S + + A
Sbjct: 1166 CAPILVEEGAATHGGWVTDLCFSPDSKMLVSA 1197
Score = 161 (61.7 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 73/308 (23%), Positives = 122/308 (39%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH + FSP V LW++++ + C GH +WV C+ +S DG
Sbjct: 839 GHHSTIQYCDFSPQNHLAVVALSQCCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSF 898
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWE-PVHLNAP--CRRF-VSASKDGD 221
++ S ++ W+ T K N K+ I + E V + A +R + K G
Sbjct: 899 LTSSDDQTIRLWE--TKKVCKNSAIVLKQEIDVVFQENEVMVLAVDNIKRLQLINGKTGQ 956
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHG 281
+ C CLS H + + +GG+ D +++ E ++ + GH
Sbjct: 957 IDYLIEAQVSCC-CLSPH---LQYIAFGGE--------DGAVEILELLNNRIFQSRIGHK 1004
Query: 282 HWVNSLALSTEYALRTGAFDHTGKQ---YSSPEEM-KKAALERYNKIKGNAPERLVSGSD 337
V + + + + D + Q + S E + +A E K +L+S S
Sbjct: 1005 KTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYVFLQAHQETVKDFKLLKNSKLLSWSF 1064
Query: 338 DFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAV 397
D T+ +W + K + HQ V SPD +S S DK+ K+W+ +
Sbjct: 1065 DGTVKIWSIITGRIEKDFVC-HQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSPLHE 1123
Query: 398 FRGHVGPV 405
RGH G V
Sbjct: 1124 LRGHKGCV 1131
Score = 156 (60.0 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 73/271 (26%), Positives = 116/271 (42%)
Query: 239 HTLAV--TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-L 295
HT AV C G + G D T++V++ G+ + E+K H V A ST+ +
Sbjct: 615 HTDAVYHACFSEDGQRIASCGV-DKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFI 673
Query: 296 RTGAFDHTGKQYSSPE----EMKKAALERYN--KIKGNAPERLVS-GSDDFTMFLWEPAV 348
T + D K ++S + E+ N N+ L++ S D + LW+
Sbjct: 674 ATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWD-LN 732
Query: 349 SKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
K+ + M GH VNH FSPD + +AS S D ++KLW+ + A R + V Q
Sbjct: 733 QKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKS----ANERKSIN-VKQF 787
Query: 409 RFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDL- 467
P V+ + CC SWSAD ++ +K+ ++DI T L ++
Sbjct: 788 FLNS----EEPQEDMEVI-VKCC----SWSADGTRIMVAAKNKIF-LFDIHTGGLLAEIH 837
Query: 468 PGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
GH + D+SP ++LW
Sbjct: 838 TGHHSTIQYCDFSPQNHLAVVALSQCCVELW 868
Score = 121 (47.7 bits), Expect = 9.2e-17, Sum P(2) = 9.2e-17
Identities = 43/178 (24%), Positives = 84/178 (47%)
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF 394
G +D + + E ++ ++R+ GH++ V H+ F+ DG+ + S+S D SI++WN + ++
Sbjct: 980 GGEDGAVEILELLNNRIFQSRI-GHKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEEY 1038
Query: 395 VAVFRGHVGPVYQIRF----ELI-YCFRYPSNFYCVV------DMSCCM-SLYSW--SAD 440
V + + H V + +L+ + F + ++ D C ++ S S D
Sbjct: 1039 VFL-QAHQETVKDFKLLKNSKLLSWSFDGTVKIWSIITGRIEKDFVCHQDTVLSCDISPD 1097
Query: 441 SRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+ S S D T K+W +L GH V +S D +A+G + +++W
Sbjct: 1098 ATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSVFSVDSTLLATGDDNGEIRIW 1155
Score = 106 (42.4 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 43/195 (22%), Positives = 85/195 (43%)
Query: 208 APCRRFVS-ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKV 265
+P ++++ +DG I ++ + GH V +++ DG + + S D +I+V
Sbjct: 971 SPHLQYIAFGGEDGAVEILELLNNRIFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQV 1030
Query: 266 WETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSS-PEEMKKAALERYNKI 324
W + + L+ H V L L + +FD T K +S ++K + + +
Sbjct: 1031 WNWQSEEYVF-LQAHQETVKDFKLLKNSKLLSWSFDGTVKIWSIITGRIEKDFVCHQDTV 1089
Query: 325 KGN--APE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASF 380
+P+ + S S D T +W + P + GH+ V FS D +A+
Sbjct: 1090 LSCDISPDATKFSSTSADKTAKIWSFELLS-PLHELRGHKGCVRCSVFSVDSTLLATGDD 1148
Query: 381 DKSIKLWNGTTGKFV 395
+ I++WN + G+ +
Sbjct: 1149 NGEIRIWNVSNGELL 1163
Score = 93 (37.8 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 43/191 (22%), Positives = 78/191 (40%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L+S SDD ++ +W + + HQ+ V + + + S SFD ++K+W+ T
Sbjct: 1019 LISSSDDSSIQVWN--WQSEEYVFLQAHQETVKDFKLLKNSK-LLSWSFDGTVKIWSIIT 1075
Query: 392 GKFVAVFRGHVGPVYQI-------RFEL--------IYCFRYPSNFYCVVDMSCCMSLYS 436
G+ F H V +F I+ F S + + C+
Sbjct: 1076 GRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSV 1135
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKL---------KQDLPGHADEVFAVDWSPDGEKVA 487
+S DS LL +G + +++W++ +L ++ H V + +SPD + +
Sbjct: 1136 FSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPILVEEGAATHGGWVTDLCFSPDSKMLV 1195
Query: 488 SGGKDRVLKLW 498
S G LK W
Sbjct: 1196 SAGG--YLKWW 1204
Score = 85 (35.0 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 21/62 (33%), Positives = 30/62 (48%)
Query: 77 SVEKVLSIVYQPQAVFRIRPVNRCS--ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRL 134
S + L++V Q + ++ C A GH V V FSPDG + S D T+RL
Sbjct: 850 SPQNHLAVVALSQCCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRL 909
Query: 135 WD 136
W+
Sbjct: 910 WE 911
Score = 73 (30.8 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 15/62 (24%), Positives = 29/62 (46%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+S + L + +++W++ + D GH V V +SPDG + D+ ++
Sbjct: 849 FSPQNHLAVVALSQCCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIR 908
Query: 497 LW 498
LW
Sbjct: 909 LW 910
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 235 (87.8 bits), Expect = 9.4e-17, P = 9.4e-17
Identities = 73/283 (25%), Positives = 127/283 (44%)
Query: 119 DGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWD 178
D + SGS D TV +WD+N++ ++K GH VLC+ + LVSGS + WD
Sbjct: 230 DDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWD 289
Query: 179 PQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW--DVS--LRKCVI 234
Q +P GH + G+ ++ +S+S+D AR+W D + C+
Sbjct: 290 WQNRRPL-KVYFGHTDNVLGVVVSENYI-------ISSSRDHTARVWRLDATSPAEACMH 341
Query: 235 CLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEY 293
L GH +V V++ G+I T S D T++ W+ T G IR + H + + ++
Sbjct: 342 VLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQYNGKF 401
Query: 294 ALRTGAFDHTGKQYSSPE----EMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVS 349
+ +G+ D T + + + M + + ++ N E++VSG D T+ +W
Sbjct: 402 IV-SGSSDLTIRIFEASSGKLLRMLQGHEDLIRTVRFN-DEKIVSGGYDGTVRIWNFNTG 459
Query: 350 KQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
+Q V + F D + + + + I +WN G
Sbjct: 460 EQHCVLHNSRNSRVFGLQF--DHRRIIACTHSSEILVWNFDDG 500
Score = 229 (85.7 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 54/201 (26%), Positives = 101/201 (50%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH+ +VL + F L SGS D+T+ +WD + P+ GH + VL + S + ++
Sbjct: 259 GHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVVSEN--YI 316
Query: 166 VSGSKAGELQCWDPQTGKPSG---NPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+S S+ + W P+ + L GH + + + ++ V+AS D
Sbjct: 317 ISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQY-----SSKTGLIVTASSDRTL 371
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
R WD++ C+ + H + C ++ G ++ +GS D TI+++E + GKL+R L+GH
Sbjct: 372 RTWDITTGHCIRIIHAHQRGIACAQYNGKFIV-SGSSDLTIRIFEASSGKLLRMLQGHED 430
Query: 283 WVNSLALSTEYALRTGAFDHT 303
+ ++ + E + +G +D T
Sbjct: 431 LIRTVRFNDEKIV-SGGYDGT 450
Score = 190 (71.9 bits), Expect = 9.8e-12, P = 9.8e-12
Identities = 65/266 (24%), Positives = 126/266 (47%)
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW-GGDGVIYTGSQDCTIKVWETTQGK 272
VS SKD +WDV+ R + L GH+ +V C+ + ++ +GS D TI +W+ +
Sbjct: 235 VSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRR 294
Query: 273 LIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQY----SSPEE----MKKAALERYNKI 324
++ GH V + +S Y + + DHT + + +SP E + + L N +
Sbjct: 295 PLKVYFGHTDNVLGVVVSENYIISSSR-DHTARVWRLDATSPAEACMHVLRGHLASVNSV 353
Query: 325 KGNAPERL-VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKS 383
+ ++ L V+ S D T+ W+ + + HQ+ + ++ G+++ S S D +
Sbjct: 354 QYSSKTGLIVTASSDRTLRTWDITTGHCIRI-IHAHQRGIACAQYN--GKFIVSGSSDLT 410
Query: 384 IKLWNGTTGKFVAVFRGHVGPVYQIRF--ELIYCFRYPS-----NF-----YCVVDMSCC 431
I+++ ++GK + + +GH + +RF E I Y NF +CV+ S
Sbjct: 411 IRIFEASSGKLLRMLQGHEDLIRTVRFNDEKIVSGGYDGTVRIWNFNTGEQHCVLHNSRN 470
Query: 432 MSLYSWSADSRLLLSGSKDSTLKVWD 457
++ D R +++ + S + VW+
Sbjct: 471 SRVFGLQFDHRRIIACTHSSEILVWN 496
Score = 137 (53.3 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 40/141 (28%), Positives = 64/141 (45%)
Query: 96 PVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLC 155
P C + GH +V SV +S + + S D T+R WD+ T + H+ + C
Sbjct: 335 PAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIAC 394
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
++ GK +VSGS ++ ++ +GK L GH+ I V N + VS
Sbjct: 395 AQYN--GKFIVSGSSDLTIRIFEASSGKLL-RMLQGHEDLI-----RTVRFND--EKIVS 444
Query: 216 ASKDGDARIWDVSL--RKCVI 234
DG RIW+ + + CV+
Sbjct: 445 GGYDGTVRIWNFNTGEQHCVL 465
Score = 127 (49.8 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 54/219 (24%), Positives = 94/219 (42%)
Query: 242 AVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAF 300
+V CV++ D ++ +GS+D T+ VW+ ++ +L GH V L L +G+
Sbjct: 223 SVYCVQYD-DEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSS 281
Query: 301 DHTGKQYSSPEEMK-KAALERYNKIKGNAPER--LVSGSDDFTMFLWEPAVSKQPKTRM- 356
D T + K + + G ++S S D T +W + + M
Sbjct: 282 DSTIIIWDWQNRRPLKVYFGHTDNVLGVVVSENYIISSSRDHTARVWRLDATSPAEACMH 341
Query: 357 --TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIY 414
GH VN V +S + +AS D++++ W+ TTG + + H I
Sbjct: 342 VLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRG--------IA 393
Query: 415 CFRYPSNFYCVVDMSCCMSLYSWSADS-RLL--LSGSKD 450
C +Y F +V S +++ + A S +LL L G +D
Sbjct: 394 CAQYNGKF--IVSGSSDLTIRIFEASSGKLLRMLQGHED 430
Score = 121 (47.7 bits), Expect = 0.00038, P = 0.00038
Identities = 29/92 (31%), Positives = 46/92 (50%)
Query: 409 RFELIYCFRYPS-NFYCVVDMSCCM-SLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQD 466
RF L+ F PS F D + S+Y D +++SGSKD T+ VWD+ ++ +
Sbjct: 198 RF-LVSTFNNPSIRFPADQDFRATLDSVYCVQYDDEIMVSGSKDRTVSVWDVNSRFILYK 256
Query: 467 LPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L GH+ V +D+ + SG D + +W
Sbjct: 257 LYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIW 288
Score = 45 (20.9 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 444 LLSGSKDSTLKVWDIRT 460
++SG D T+++W+ T
Sbjct: 442 IVSGGYDGTVRIWNFNT 458
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 221 (82.9 bits), Expect = 9.6e-17, Sum P(2) = 9.6e-17
Identities = 71/316 (22%), Positives = 135/316 (42%)
Query: 89 QAVFRIRPVNRCSA----TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMF 144
Q I PV R T+ GH + ++ + D R L S S D + +WD T +
Sbjct: 32 QITANIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVH 91
Query: 145 KCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPS---GNPLSGHKKWITGISW 201
+WV+ A++ G ++ G + +T + + L+GH +++ +
Sbjct: 92 AIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRF 151
Query: 202 EPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQD 260
L+ + V++S D +WD+ + +GHT V + D ++ +G+ D
Sbjct: 152 ----LDD--NQIVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACD 205
Query: 261 CTIKVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALE 319
+ K+W+ +G + GH +N++ A TG+ D T + + + +
Sbjct: 206 ASAKLWDIREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYS 265
Query: 320 RYNKIKG-------NAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
N I G + L++G DDF +W+ + + + GH V+ + + DG
Sbjct: 266 HDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGV-LAGHDNRVSCLGVTDDG 324
Query: 373 QWVASASFDKSIKLWN 388
VA+ S+D +K+WN
Sbjct: 325 MAVATGSWDSFLKIWN 340
Score = 172 (65.6 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 69/271 (25%), Positives = 111/271 (40%)
Query: 148 GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQT-GKPSGNPLSGHKKWITGISWEPVHL 206
GH + + W D + LVS S+ G+L WD T K PL W+ ++ P
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAYAPSGN 110
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLS----GHTLAVTCVKWGGDGVIYTGSQDCT 262
C D I+ + R+ + +S GHT ++C ++ D I T S D T
Sbjct: 111 YVAC-----GGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT 165
Query: 263 IKVWETTQGKLIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPEEMKKAALERY 321
+W+ G+ GH V SL+L+ + L +GA D + K + E M + +
Sbjct: 166 CALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTGH 225
Query: 322 ----NKI----KGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV---NHVYFSP 370
N I GNA +GSDD T L++ ++ + H ++ V FS
Sbjct: 226 ESDINAICFFPNGNA---FATGSDDATCRLFDLRADQE--LMVYSHDNIICGITSVAFSK 280
Query: 371 DGQWVASASFDKSIKLWNGTTGKFVAVFRGH 401
G+ + + D + +W+ V GH
Sbjct: 281 SGRLLLAGYDDFNCNVWDTLKADRAGVLAGH 311
Score = 136 (52.9 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 55/225 (24%), Positives = 90/225 (40%)
Query: 236 LSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL--STE 292
L GH + + WG D ++ + SQD + +W++ + + WV + A S
Sbjct: 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 293 YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA----------PERLVSGSDDFTMF 342
Y + G D+ YS + R ++ G+ ++V+ S D T
Sbjct: 111 Y-VACGGLDNICSIYSLKTREGNVRVSR--ELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
LW+ +Q T GH V + +PD + S + D S KLW+ G F GH
Sbjct: 168 LWDIETGQQTTT-FAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTGHE 226
Query: 403 GPVYQIRFELIYCFRYPSN--FYCVVDMSCCMSLYSWSADSRLLL 445
+ I CF +P+ F D + C L+ AD L++
Sbjct: 227 SDINAI------CF-FPNGNAFATGSDDATCR-LFDLRADQELMV 263
Score = 121 (47.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 25/67 (37%), Positives = 41/67 (61%)
Query: 432 MSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGK 491
MSL S + D+RL +SG+ D++ K+WDIR +Q GH ++ A+ + P+G A+G
Sbjct: 188 MSL-SLAPDTRLFVSGACDASAKLWDIREGMCRQTFTGHESDINAICFFPNGNAFATGSD 246
Query: 492 DRVLKLW 498
D +L+
Sbjct: 247 DATCRLF 253
Score = 105 (42.0 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 23/71 (32%), Positives = 34/71 (47%)
Query: 428 MSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 487
+SCC L D +++ S D+T +WDI T + GH +V ++ +PD
Sbjct: 146 LSCCRFL-----DDNQIVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFV 200
Query: 488 SGGKDRVLKLW 498
SG D KLW
Sbjct: 201 SGACDASAKLW 211
Score = 103 (41.3 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 24/69 (34%), Positives = 34/69 (49%)
Query: 430 CCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASG 489
C ++ ++S RLLL+G D VWD L GH + V + + DG VA+G
Sbjct: 271 CGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 490 GKDRVLKLW 498
D LK+W
Sbjct: 331 SWDSFLKIW 339
Score = 62 (26.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 345 EPAVSKQPKTRMT--GHQQLVNHVYFSPDGQWVASASFDKSIKLWNG-TTGKFVAV 397
+P Q +TR T GH + +++ D + + SAS D + +W+ TT K A+
Sbjct: 38 DPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAI 93
Score = 44 (20.5 bits), Expect = 9.6e-17, Sum P(2) = 9.6e-17
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 440 DSRLLLSGSKDSTLKVWD 457
D + +GS DS LK+W+
Sbjct: 323 DGMAVATGSWDSFLKIWN 340
>ASPGD|ASPL0000073843 [details] [associations]
symbol:AN4460 species:162425 "Emericella nidulans"
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 EMBL:BN001303
GO:GO:0006364 GO:GO:0032040 EMBL:AACD01000077 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP OrthoDB:EOG4DZ53K RefSeq:XP_662064.1
ProteinModelPortal:Q5B4S0 STRING:Q5B4S0
EnsemblFungi:CADANIAT00005992 GeneID:2872260 KEGG:ani:AN4460.2
Uniprot:Q5B4S0
Length = 977
Score = 177 (67.4 bits), Expect = 9.7e-17, Sum P(2) = 9.7e-17
Identities = 67/259 (25%), Positives = 108/259 (41%)
Query: 236 LSGHTLAVTC--VKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEY 293
L GH + C V W G + TG++D T ++W +L + + T +
Sbjct: 428 LDGHDDIIICIDVDWSGHWLA-TGAKDNTARLW-----RLDPQNSSY----------TCF 471
Query: 294 ALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWE-----PAV 348
AL TG + G S P + Y + P +++GS D T+ W P +
Sbjct: 472 ALLTGHAESLGA-ISFPRDSPPPDTPAYKAPVNHPPPFVITGSQDRTVKRWNVGKLGPTI 530
Query: 349 SKQPKTRMT-----GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVG 403
+P T H + +N + SP ASAS D+++K+W+ G V V RGH
Sbjct: 531 GNKPHTPKALFTRKAHDKDINALDVSPSSALFASASQDRTVKIWSADDGSVVGVLRGHKR 590
Query: 404 PVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSR-LLLSGSKDSTLKVWDIRTQK 462
V+ RF P + +S + S+ +R ++++GS D T+K+W +
Sbjct: 591 GVWSARFS-------PKG-------TPILSADAKSSTNRGMIVTGSGDKTVKLWSLSDYS 636
Query: 463 LKQDLPGHADEVFAVDWSP 481
GH + V V W P
Sbjct: 637 CLLTFEGHTNSVLKVLWLP 655
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 78/384 (20%), Positives = 137/384 (35%)
Query: 41 IVNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRIRPVNRC 100
+V ++ N++ + Y+ ++ L + E + + V Y+P +
Sbjct: 368 VVRRISGNDDDIIDLAYVGPDRSMLALATNTES--IRIVSVGPSDYRPSTDGQ-EYFGAD 424
Query: 101 SATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC----TGHKNWVLCI 156
A + GH + ++ + G LA+G+ D T RLW L+ Q + C TGH + I
Sbjct: 425 IAHLDGHDDIIICIDVDWSGHWLATGAKDNTARLWRLDPQNSSYTCFALLTGHAESLGAI 484
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV--HLNAPCRRFV 214
++ D + A + P +G+ K+W G + + P F
Sbjct: 485 SFPRDSPP--PDTPAYKAPVNHPPPFVITGSQDRTVKRWNVGKLGPTIGNKPHTPKALFT 542
Query: 215 SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLI 274
+ D D DVS + + SQD T+K+W G ++
Sbjct: 543 RKAHDKDINALDVSPSSALFA--------------------SASQDRTVKIWSADDGSVV 582
Query: 275 RELKGH--GHWVNSLALSTEYALRTGAFDHTGKQY----SSPEEMKKAALERYNKIKGNA 328
L+GH G W + L A T + S + +K +L Y+ +
Sbjct: 583 GVLRGHKRGVWSARFSPKGTPILSADAKSSTNRGMIVTGSGDKTVKLWSLSDYSCLL--- 639
Query: 329 PERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV----NHVYFSPDGQWVASASFDKSI 384
++ LW P KT + N + P VASA+ D +
Sbjct: 640 --TFEGHTNSVLKVLWLPPPDMSSKTEDEEDEDAAASKPNSIQLRP---LVASAAADGLV 694
Query: 385 KLWNGTTGKFVAVFRGHVGPVYQI 408
K+W+ TG+ H V+ +
Sbjct: 695 KIWSPYTGELETTLDNHTDRVWAL 718
Score = 125 (49.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 62/252 (24%), Positives = 104/252 (41%)
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAP-CRRFVS 215
A A G+ LV+ L D +TG L G + IT ++ P + C R +S
Sbjct: 26 ALDASGRLLVACVNEDALVV-DLETGNQLAT-LDGDGEVITSLAITPSASHVILCSRSMS 83
Query: 216 ASKDGDARIWDVS--LR-KCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQG 271
++ D + L K V L HT V G + TG+ D +IKVW+ G
Sbjct: 84 MRIYSLSQYEDTTPTLETKLVRSLKPHTAPVVTTATDSTGTLLATGAADGSIKVWDIRGG 143
Query: 272 KLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAAL---ERYNKI---- 324
+ GHG +++L + +H GK S + +K + + N++
Sbjct: 144 YITHSFHGHGGVISALCF-----FQPPTAEHDGKLSSKKKPKRKTGMAGDDDDNEMMDLD 198
Query: 325 ---KGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFD 381
N RL SGS++ + +W+ K+ + H +V + +S + SA D
Sbjct: 199 SASNSNGAFRLASGSEEGKVRVWD-LNKKKSIASLDSHVSVVRSLSYSLTENALLSAGRD 257
Query: 382 KSIKLWNGTTGK 393
K++ +W+ T K
Sbjct: 258 KTVIVWDMRTFK 269
Score = 121 (47.7 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 47/162 (29%), Positives = 71/162 (43%)
Query: 352 PKTRMT--GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
PK T H + +N + SP ASAS D+++K+W+ G V V RGH V+ R
Sbjct: 537 PKALFTRKAHDKDINALDVSPSSALFASASQDRTVKIWSADDGSVVGVLRGHKRGVWSAR 596
Query: 410 FE------LIYCFRYPSNFYCVVDMSCCMSLYSWS-ADSRLLLS--GSKDSTLKVWDIRT 460
F L + +N +V S ++ WS +D LL+ G +S LKV +
Sbjct: 597 FSPKGTPILSADAKSSTNRGMIVTGSGDKTVKLWSLSDYSCLLTFEGHTNSVLKVLWLPP 656
Query: 461 QKLKQDLPGHADEVFAVDWSPDGEK----VASGGKDRVLKLW 498
+ DE A P+ + VAS D ++K+W
Sbjct: 657 PDMSSKTEDEEDEDAAAS-KPNSIQLRPLVASAAADGLVKIW 697
Score = 114 (45.2 bits), Expect = 9.7e-17, Sum P(2) = 9.7e-17
Identities = 37/164 (22%), Positives = 71/164 (43%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV--LCIAWSADGKH 164
HT V++ A G LA+G+ D ++++WD+ GH + LC +H
Sbjct: 110 HTAPVVTTATDSTGTLLATGAADGSIKVWDIRGGYITHSFHGHGGVISALCFFQPPTAEH 169
Query: 165 LVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARI 224
G + + + +TG +G+ + S + N R S S++G R+
Sbjct: 170 --DGKLSSKKKP-KRKTGM-AGDDDDNEMMDLDSAS----NSNGAFR-LASGSEEGKVRV 220
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWG-GDGVIYTGSQDCTIKVWE 267
WD++ +K + L H V + + + + + +D T+ VW+
Sbjct: 221 WDLNKKKSIASLDSHVSVVRSLSYSLTENALLSAGRDKTVIVWD 264
Score = 100 (40.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 68/294 (23%), Positives = 110/294 (37%)
Query: 215 SASKDGDARIWDV----SLRKCVICLSGHTLAVTCVKWGGDG-----------------V 253
+ +KD AR+W + S C L+GH ++ + + D
Sbjct: 449 TGAKDNTARLWRLDPQNSSYTCFALLTGHAESLGAISFPRDSPPPDTPAYKAPVNHPPPF 508
Query: 254 IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEM 313
+ TGSQD T+K W GKL + H +L + A D + S
Sbjct: 509 VITGSQDRTVKRWNV--GKLGPTIGNKPHTPKALFTRKAHDKDINALDVS----PSSALF 562
Query: 314 KKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQ 373
A+ +R KI +V +W S PK G L S +
Sbjct: 563 ASASQDRTVKIWSADDGSVVGVLRGHKRGVWSARFS--PK----GTPILSADAKSSTNRG 616
Query: 374 WVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMS 433
+ + S DK++KLW+ + + F GH V ++ + + S D S
Sbjct: 617 MIVTGSGDKTVKLWSLSDYSCLLTFEGHTNSVLKVLW--LPPPDMSSKTEDEEDEDAAAS 674
Query: 434 LYSWSADSR-LLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAV-DWSPDGEK 485
+ S R L+ S + D +K+W T +L+ L H D V+A+ +P G +
Sbjct: 675 KPN-SIQLRPLVASAAADGLVKIWSPYTGELETTLDNHTDRVWALASPTPSGTR 727
Score = 87 (35.7 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 23/73 (31%), Positives = 38/73 (52%)
Query: 112 LSVAFSPDGR-QLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSK 170
L A + +G +LASGS + VR+WDLN + + H + V +++S L+S +
Sbjct: 197 LDSASNSNGAFRLASGSEEGKVRVWDLNKKKSIASLDSHVSVVRSLSYSLTENALLSAGR 256
Query: 171 AGELQCWDPQTGK 183
+ WD +T K
Sbjct: 257 DKTVIVWDMRTFK 269
Score = 87 (35.7 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 50/216 (23%), Positives = 87/216 (40%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQ---TPMFKCT------GHKNW 152
AT+ G E + S+A +P + S ++R++ L+ TP + H
Sbjct: 54 ATLDGDGEVITSLAITPSASHVILCSRSMSMRIYSLSQYEDTTPTLETKLVRSLKPHTAP 113
Query: 153 VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRR 212
V+ A + G L +G+ G ++ WD + G + + GH I+ + + P
Sbjct: 114 VVTTATDSTGTLLATGAADGSIKVWDIRGGYIT-HSFHGHGGVISALCF----FQPP--- 165
Query: 213 FVSASKDGDARIWDVSLRKCVICLSGHTLAV----TCVKWGGDGVIYTGSQDCTIKVWET 268
+A DG RK + + + G + +GS++ ++VW+
Sbjct: 166 --TAEHDGKLSSKKKPKRKTGMAGDDDDNEMMDLDSASNSNGAFRLASGSEEGKVRVWDL 223
Query: 269 TQGKLIRELKGHGHWVNSLALS-TEYALRTGAFDHT 303
+ K I L H V SL+ S TE AL + D T
Sbjct: 224 NKKKSIASLDSHVSVVRSLSYSLTENALLSAGRDKT 259
Score = 84 (34.6 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 428 MSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 487
+S SL S+S LLS +D T+ VWD+RT K ++ +P + A + +G
Sbjct: 236 VSVVRSL-SYSLTENALLSAGRDKTVIVWDMRTFKTRRIIPV-LESAEAASFVAEGGLCL 293
Query: 488 SGGKDRVLKLW 498
GG+ L++W
Sbjct: 294 VGGEYGRLRVW 304
Score = 81 (33.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 35/155 (22%), Positives = 63/155 (40%)
Query: 356 MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN----GTTGKFVAVFRGHVGPVYQIRFE 411
+ GH ++ + G W+A+ + D + +LW ++ A+ GH + I F
Sbjct: 428 LDGHDDIIICIDVDWSGHWLATGAKDNTARLWRLDPQNSSYTCFALLTGHAESLGAISFP 487
Query: 412 L------IYCFRYPSNFY--CVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKL 463
++ P N V+ S ++ W+ G+K T K + T+K
Sbjct: 488 RDSPPPDTPAYKAPVNHPPPFVITGSQDRTVKRWNVGKLGPTIGNKPHTPKA--LFTRK- 544
Query: 464 KQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
H ++ A+D SP AS +DR +K+W
Sbjct: 545 -----AHDKDINALDVSPSSALFASASQDRTVKIW 574
Score = 73 (30.8 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 26/85 (30%), Positives = 39/85 (45%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL----CIA 157
A++ H V S+++S L S D TV +WD+ T FK T VL +
Sbjct: 230 ASLDSHVSVVRSLSYSLTENALLSAGRDKTVIVWDMRT----FK-TRRIIPVLESAEAAS 284
Query: 158 WSADGKHLVSGSKAGELQCWDPQTG 182
+ A+G + G + G L+ WD G
Sbjct: 285 FVAEGGLCLVGGEYGRLRVWDCNRG 309
Score = 73 (30.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 37/148 (25%), Positives = 58/148 (39%)
Query: 252 GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWV-NSLALST-EYALRTGAFDHTGKQYSS 309
G+I TGS D T+K+W + + +GH + V L L + + +T + S
Sbjct: 616 GMIVTGSGDKTVKLWSLSDYSCLLTFEGHTNSVLKVLWLPPPDMSSKTEDEEDEDAAASK 675
Query: 310 PEEMK------KAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV 363
P ++ AA + KI L + D+ T +W A TR +
Sbjct: 676 PNSIQLRPLVASAAADGLVKIWSPYTGELETTLDNHTDRVWALASPTPSGTRDDVNSSAT 735
Query: 364 NHVYFSPDGQWVASASFDKSIKLWNGTT 391
SP +AS S D ++ W TT
Sbjct: 736 KST--SPYA--IASGSADSTVTFWTDTT 759
Score = 48 (22.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDI-RTQKLK--QDLPGHADEVFAVDWSPDGEKVASGGKD 492
S+ A+ L L G + L+VWD R ++ Q+ + + A+ ++P + D
Sbjct: 284 SFVAEGGLCLVGGEYGRLRVWDCNRGGEVTGDQEAAPEFEAIIAIHYTPGMSFAMTVHAD 343
Query: 493 RVLKL 497
+ L+L
Sbjct: 344 QTLRL 348
Score = 37 (18.1 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 109 EAVLSVAFSPDGRQLA-SGSGDTTVRLWDL 137
EA++++ ++P G A + D T+RL L
Sbjct: 323 EAIIAIHYTP-GMSFAMTVHADQTLRLHSL 351
>UNIPROTKB|B4GT01 [details] [associations]
symbol:GL26386 "Ribosome biogenesis protein WDR12 homolog"
species:7234 "Drosophila persimilis" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 EMBL:CH479189 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002021667.1
ProteinModelPortal:B4GT01 EnsemblMetazoa:FBtr0192001 GeneID:6596580
KEGG:dpe:Dper_GL26386 FlyBase:FBgn0163968 Uniprot:B4GT01
Length = 419
Score = 169 (64.5 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 68/240 (28%), Positives = 110/240 (45%)
Query: 103 TIAGHT---EAVLSVAFSPDGRQLASGSGDTTVRLWD----LNTQTPMFKCTGHKNWVLC 155
TI GHT +AV ++ D + S S D T LW NT + C GH+ V
Sbjct: 139 TIPGHTAPIKAVDWISLDDDTGRFVSSSQDQTAMLWQWNVGANTVECVSVCKGHERGVDS 198
Query: 156 IAWSADGKHLVSGSKAGELQCW-----DPQTG-----KPSG--NP---LSGHKKWITGIS 200
++ S DG+ +GS L+ W D G K SG P L GH++ I+ +
Sbjct: 199 VSVSPDGQRFATGSWDTMLKVWSAELEDAGEGTSKRMKESGVRTPKITLQGHRESISAVQ 258
Query: 201 WEPVHLNAPCRRFVSASKDGDARIWDVSLR--KCVICLSGHTLAVTCVKWGGDGVIYTGS 258
W ++A ++ S D ++WD+SL K I + + K + +I T S
Sbjct: 259 W----MDAST--LLTGSWDHTLKVWDLSLEGIKAEISTNKSIFDASYSKL--NHLILTAS 310
Query: 259 QDCTIKVWE--TTQGKLIRELK-GHGHWVNSLALST--EYALRTGAFDHTGKQYS--SPE 311
D +++++ T QG ++R GH WV ++ ST E+ +G++D+ K + SP+
Sbjct: 311 ADKNLRLYDSRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGSYDNQNKLWDCRSPK 370
Score = 157 (60.3 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 62/243 (25%), Positives = 106/243 (43%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLW----------------DLNTQTPM 143
C + GH V SV+ SPDG++ A+GS DT +++W + +TP
Sbjct: 185 CVSVCKGHERGVDSVSVSPDGQRFATGSWDTMLKVWSAELEDAGEGTSKRMKESGVRTPK 244
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
GH+ + + W D L++GS L+ WD +S +K I S+
Sbjct: 245 ITLQGHRESISAVQWM-DASTLLTGSWDHTLKVWDLSLEGIKAE-ISTNKS-IFDASYSK 301
Query: 204 V-HLNAPCRRFVSASKDGDARIWDVSLRKCVICLS---GHTLAVTCVKWGG--DGVIYTG 257
+ HL ++AS D + R++D + + + GH V V W + + +G
Sbjct: 302 LNHL------ILTASADKNLRLYDSRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSG 355
Query: 258 SQDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKA 316
S D K+W+ K + +L GHG V + + + +G D+T + + S +KA
Sbjct: 356 SYDNQNKLWDCRSPKAPLYDLLGHGEKVLDIDWTNPKYIVSGGSDNTVRVFKS----RKA 411
Query: 317 ALE 319
+E
Sbjct: 412 LVE 414
Score = 144 (55.7 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 58/229 (25%), Positives = 105/229 (45%)
Query: 280 HGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEM------KKAALERYNKIK-GNAPERL 332
H WV+++ S ++ L TG +D+T +++ + A ++ + I + R
Sbjct: 104 HDDWVSAVKASGKWIL-TGCYDNTLNIWTNKGKHILTIPGHTAPIKAVDWISLDDDTGRF 162
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMT---GHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
VS S D T LW+ V ++ GH++ V+ V SPDGQ A+ S+D +K+W+
Sbjct: 163 VSSSQDQTAMLWQWNVGANTVECVSVCKGHERGVDSVSVSPDGQRFATGSWDTMLKVWSA 222
Query: 390 TTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSK 449
G G +++ + R P + +S W D+ LL+GS
Sbjct: 223 ELED-----AGE-GTSKRMKESGV---RTPK--ITLQGHRESISAVQWM-DASTLLTGSW 270
Query: 450 DSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
D TLKVWD+ + +K ++ + +F +S + + D+ L+L+
Sbjct: 271 DHTLKVWDLSLEGIKAEISTNKS-IFDASYSKLNHLILTASADKNLRLY 318
Score = 139 (54.0 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 66/297 (22%), Positives = 115/297 (38%)
Query: 37 QLSQIVNKLL--NNEEKLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRI 94
+L+ VN LL + + F + D L L +L + +S E + I Y + F
Sbjct: 38 ELNTFVNALLLSKGSSAVDFDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVER--FPA 95
Query: 95 RPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
C H + V +V S G+ + +G D T+ +W N + GH +
Sbjct: 96 PEPQDCLL----HDDWVSAVKAS--GKWILTGCYDNTLNIWT-NKGKHILTIPGHTAPIK 148
Query: 155 CIAWSA---DGKHLVSGSKAGELQCWDPQTGKPSGNPLS---GHKKWITGISWEPVHLNA 208
+ W + D VS S+ W G + +S GH++ + +S P
Sbjct: 149 AVDWISLDDDTGRFVSSSQDQTAMLWQWNVGANTVECVSVCKGHERGVDSVSVSP----- 203
Query: 209 PCRRFVSASKDGDARIWDVSL----------------RKCVICLSGHTLAVTCVKWGGDG 252
+RF + S D ++W L R I L GH +++ V+W
Sbjct: 204 DGQRFATGSWDTMLKVWSAELEDAGEGTSKRMKESGVRTPKITLQGHRESISAVQWMDAS 263
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSS 309
+ TGS D T+KVW+ + + E+ + ++ + + T + D + Y S
Sbjct: 264 TLLTGSWDHTLKVWDLSLEGIKAEISTNKSIFDASYSKLNHLILTASADKNLRLYDS 320
Score = 120 (47.3 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 46/221 (20%), Positives = 91/221 (41%)
Query: 176 CWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVIC 235
C + G S + +++ TG SW+ + L A + R+ + +R I
Sbjct: 189 CKGHERGVDSVSVSPDGQRFATG-SWDTM-LKVWSAELEDAGEGTSKRMKESGVRTPKIT 246
Query: 236 LSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL 295
L GH +++ V+W + TGS D T+KVW+ + + E+ + ++ + +
Sbjct: 247 LQGHRESISAVQWMDASTLLTGSWDHTLKVWDLSLEGIKAEISTNKSIFDASYSKLNHLI 306
Query: 296 RTGAFDHTGKQYSSPEEMKKAALERY-------NKIKGNAPERL--VSGSDDFTMFLWEP 346
T + D + Y S Y + + E VSGS D LW+
Sbjct: 307 LTASADKNLRLYDSRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGSYDNQNKLWDC 366
Query: 347 AVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
K P + GH + V + ++ + +++ S D +++++
Sbjct: 367 RSPKAPLYDLLGHGEKVLDIDWT-NPKYIVSGGSDNTVRVF 406
Score = 111 (44.1 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 437 WSADSRLL-LSGSKDSTLKVWDIRTQKLK-QDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
WS L +SGS D+ K+WD R+ K DL GH ++V +DW+ + + + SGG D
Sbjct: 344 WSTTEEFLFVSGSYDNQNKLWDCRSPKAPLYDLLGHGEKVLDIDWT-NPKYIVSGGSDNT 402
Query: 495 LKLW 498
++++
Sbjct: 403 VRVF 406
Score = 105 (42.0 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 46/206 (22%), Positives = 89/206 (43%)
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKW--- 248
H W++ + A + ++ D IW + K ++ + GHT + V W
Sbjct: 104 HDDWVSAVK-------ASGKWILTGCYDNTLNIW-TNKGKHILTIPGHTAPIKAVDWISL 155
Query: 249 GGD-GVIYTGSQDCTIKVWETTQG----KLIRELKGHGHWVNSLALSTE-YALRTGAFDH 302
D G + SQD T +W+ G + + KGH V+S+++S + TG++D
Sbjct: 156 DDDTGRFVSSSQDQTAMLWQWNVGANTVECVSVCKGHERGVDSVSVSPDGQRFATGSWDT 215
Query: 303 TGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQL 362
K +S+ E++ A +G + SG + PK + GH++
Sbjct: 216 MLKVWSA--ELEDAG-------EGTSKRMKESGV-------------RTPKITLQGHRES 253
Query: 363 VNHVYFSPDGQWVASASFDKSIKLWN 388
++ V + D + + S+D ++K+W+
Sbjct: 254 ISAVQWM-DASTLLTGSWDHTLKVWD 278
Score = 64 (27.6 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 23/95 (24%), Positives = 48/95 (50%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L++GS D T+ +W+ ++ + K ++ ++ + + Y S + +AS DK+++L++ T
Sbjct: 265 LLTGSWDHTLKVWDLSL-EGIKAEISTNKSIFDASY-SKLNHLILTASADKNLRLYDSRT 322
Query: 392 --GKFVA-VFRGHVGPVYQIRFELIYCFRYPSNFY 423
G V + GH V + + F + S Y
Sbjct: 323 NQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGSY 357
Score = 39 (18.8 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 7/23 (30%), Positives = 16/23 (69%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIR 459
W+ + + ++SG D+T++V+ R
Sbjct: 388 WT-NPKYIVSGGSDNTVRVFKSR 409
>UNIPROTKB|B3N534 [details] [associations]
symbol:GG10358 "Ribosome biogenesis protein WDR12 homolog"
species:7220 "Drosophila erecta" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH954177
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_001969920.1
ProteinModelPortal:B3N534 EnsemblMetazoa:FBtr0130412 GeneID:6542886
KEGG:der:Dere_GG10358 FlyBase:FBgn0102667 Uniprot:B3N534
Length = 420
Score = 160 (61.4 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 61/232 (26%), Positives = 101/232 (43%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLW----------------DLNTQTPM 143
C + GH V SV+ SPDG + A+GS DT +++W + +TP
Sbjct: 186 CVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVWSAEQEDAAEGSSKRMKESGVRTPK 245
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
GH+ V + W D L++GS L+ WD + +S +K I S+
Sbjct: 246 ITLQGHRESVSAVQWM-DASTLLTGSWDHTLKVWDLSL-EGIKTEISTNKS-IFDASYSK 302
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLS---GHTLAVTCVKWGG--DGVIYTGS 258
LN R ++AS D + R++D + + + GH V V W + + +G+
Sbjct: 303 --LN---RLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGA 357
Query: 259 QDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSS 309
D K+W+ K + +L GHG V + S + +G D+T + + S
Sbjct: 358 YDNQNKLWDCRSPKAPLYDLLGHGEKVLDIDWSNPKYIVSGGVDNTVRVFKS 409
Score = 144 (55.7 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 65/251 (25%), Positives = 105/251 (41%)
Query: 37 QLSQIVNKLLNNEE---KLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFR 93
+L+ VN LL ++ + F + D L L +L + +S E + I Y + F
Sbjct: 38 ELNTFVNALLRQKDGSSDTDFDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVER--FP 95
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
C H + V +V S G+ + SG D T+ LW N + +GH +
Sbjct: 96 APEPQDCLL----HDDWVSAVKAS--GKWILSGCYDNTLNLWT-NKGKHILTISGHTAPI 148
Query: 154 LCIAW-SADGK--HLVSGSKAGELQCWDPQTGKPSGNPLS---GHKKWITGISWEPVHLN 207
+ W S D + VS S+ W G S +S GH++ + +S P L
Sbjct: 149 KAVDWISLDEETGRFVSTSQDQTAMLWQWNVGSNSVECVSVCKGHERGVDSVSVSPDGLR 208
Query: 208 APCRRF-----VSASKDGDA------RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYT 256
+ V +++ DA R+ + +R I L GH +V+ V+W + T
Sbjct: 209 FATGSWDTMLKVWSAEQEDAAEGSSKRMKESGVRTPKITLQGHRESVSAVQWMDASTLLT 268
Query: 257 GSQDCTIKVWE 267
GS D T+KVW+
Sbjct: 269 GSWDHTLKVWD 279
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 55/229 (24%), Positives = 102/229 (44%)
Query: 280 HGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEM------KKAALERYNKIK-GNAPERL 332
H WV+++ S ++ L +G +D+T +++ + A ++ + I R
Sbjct: 105 HDDWVSAVKASGKWIL-SGCYDNTLNLWTNKGKHILTISGHTAPIKAVDWISLDEETGRF 163
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMT---GHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
VS S D T LW+ V ++ GH++ V+ V SPDG A+ S+D +K+W+
Sbjct: 164 VSTSQDQTAMLWQWNVGSNSVECVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVWSA 223
Query: 390 TTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSK 449
G +++ + R P + +S W D+ LL+GS
Sbjct: 224 EQEDAAE------GSSKRMKESGV---RTPK--ITLQGHRESVSAVQWM-DASTLLTGSW 271
Query: 450 DSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
D TLKVWD+ + +K ++ + +F +S + + D+ L+L+
Sbjct: 272 DHTLKVWDLSLEGIKTEISTNKS-IFDASYSKLNRLILTASADKNLRLY 319
Score = 118 (46.6 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 60/283 (21%), Positives = 112/283 (39%)
Query: 120 GRQLASGSGDTT-VRL--W-DLNTQTPMFKCTGHKNWVLCIAWSADGKHL--VSGSKAGE 173
G+ + + SG T ++ W L+ +T F T + W+ + VS K E
Sbjct: 135 GKHILTISGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWQWNVGSNSVECVSVCKGHE 194
Query: 174 LQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCV 233
D + P G ++ TG SW+ + L A++ R+ + +R
Sbjct: 195 RGV-DSVSVSPDG------LRFATG-SWDTM-LKVWSAEQEDAAEGSSKRMKESGVRTPK 245
Query: 234 ICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEY 293
I L GH +V+ V+W + TGS D T+KVW+ + + E+ + ++
Sbjct: 246 ITLQGHRESVSAVQWMDASTLLTGSWDHTLKVWDLSLEGIKTEISTNKSIFDASYSKLNR 305
Query: 294 ALRTGAFDHTGKQYSSPEEMKKAALERY-------NKIKGNAPERL--VSGSDDFTMFLW 344
+ T + D + Y Y + + E VSG+ D LW
Sbjct: 306 LILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLW 365
Query: 345 EPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLW 387
+ K P + GH + V + +S + +++ S D +++++
Sbjct: 366 DCRSPKAPLYDLLGHGEKVLDIDWS-NPKYIVSGGVDNTVRVF 407
Score = 112 (44.5 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 51/207 (24%), Positives = 93/207 (44%)
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG- 250
H W++ + A + +S D +W + K ++ +SGHT + V W
Sbjct: 105 HDDWVSAVK-------ASGKWILSGCYDNTLNLW-TNKGKHILTISGHTAPIKAVDWISL 156
Query: 251 D---GVIYTGSQDCTIKVWETTQG----KLIRELKGHGHWVNSLALSTEYALR--TGAFD 301
D G + SQD T +W+ G + + KGH V+S+++S + LR TG++D
Sbjct: 157 DEETGRFVSTSQDQTAMLWQWNVGSNSVECVSVCKGHERGVDSVSVSPD-GLRFATGSWD 215
Query: 302 HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
K +S+ +E AA +G++ SG + PK + GH++
Sbjct: 216 TMLKVWSAEQE--DAA-------EGSSKRMKESGV-------------RTPKITLQGHRE 253
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWN 388
V+ V + D + + S+D ++K+W+
Sbjct: 254 SVSAVQWM-DASTLLTGSWDHTLKVWD 279
Score = 109 (43.4 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 437 WSADSRLL-LSGSKDSTLKVWDIRTQKLK-QDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
WS L +SG+ D+ K+WD R+ K DL GH ++V +DWS + + + SGG D
Sbjct: 345 WSTTEEFLFVSGAYDNQNKLWDCRSPKAPLYDLLGHGEKVLDIDWS-NPKYIVSGGVDNT 403
Query: 495 LKLW 498
++++
Sbjct: 404 VRVF 407
Score = 82 (33.9 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQK---LKQDLPGHADEVFAVDWSPDGEKV-ASGGK 491
S+S +RL+L+ S D L+++D RT + ++ GH V V WS E + SG
Sbjct: 299 SYSKLNRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAY 358
Query: 492 DRVLKLW 498
D KLW
Sbjct: 359 DNQNKLW 365
Score = 68 (29.0 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 24/95 (25%), Positives = 50/95 (52%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L++GS D T+ +W+ ++ + KT ++ ++ + + Y S + + +AS DK+++L++ T
Sbjct: 266 LLTGSWDHTLKVWDLSL-EGIKTEISTNKSIFDASY-SKLNRLILTASADKNLRLYDPRT 323
Query: 392 --GKFVA-VFRGHVGPVYQIRFELIYCFRYPSNFY 423
G V + GH V + + F + S Y
Sbjct: 324 NQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAY 358
Score = 42 (19.8 bits), Expect = 7.1e-10, Sum P(3) = 7.1e-10
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQD 466
WS + + ++SG D+T++V+ R + L +D
Sbjct: 389 WS-NPKYIVSGGVDNTVRVFKSR-KALAED 416
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 189 (71.6 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 52/184 (28%), Positives = 87/184 (47%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T GH++ V + F+ + L +GS DTT+++W +++ + TGH V + + D
Sbjct: 378 TFTGHSDGVTCLQFNR--KYLMTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVF--DN 433
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ L+SG ++ W+ TG+ GH+ + + + N + VS S D
Sbjct: 434 QKLISGGLDSTIKVWNYHTGQCIAT-YRGHEDAVVSVDFT----N---KSIVSGSADHTV 485
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVK-WGGDGVIYTGSQDCTIKVWETTQGKLIRELKG-- 279
R+W V R C L GHT V VK I++ S D TI++W+ + I+ G
Sbjct: 486 RVWHVDSRTCYT-LRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNECIKVFGGME 544
Query: 280 -HGH 282
+GH
Sbjct: 545 NNGH 548
Score = 185 (70.2 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 51/177 (28%), Positives = 84/177 (47%)
Query: 237 SGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALR 296
+GH+ VTC+++ + TGS D TIK+W+ G+ ++ L GH V +L + L
Sbjct: 380 TGHSDGVTCLQFNRK-YLMTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVFDNQ-KLI 437
Query: 297 TGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP---ERLVSGSDDFTMFLWEPAVSKQPK 353
+G D T K ++ A + + + +VSGS D T+ +W V +
Sbjct: 438 SGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFTNKSIVSGSADHTVRVWH--VDSRTC 495
Query: 354 TRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVF-----RGHVGPV 405
+ GH VNHV + SAS D +I++W+ + + + VF GH+G V
Sbjct: 496 YTLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNECIKVFGGMENNGHIGQV 552
Score = 159 (61.0 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 41/152 (26%), Positives = 75/152 (49%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWS 159
C T+ GHT+ V ++ F D ++L SG D+T+++W+ +T + GH++ V+ + ++
Sbjct: 415 CVKTLTGHTKGVRALVF--DNQKLISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFT 472
Query: 160 ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
K +VSGS ++ W + L GH W+ + +H + SAS D
Sbjct: 473 --NKSIVSGSADHTVRVW--HVDSRTCYTLRGHTDWVNHVK---IH--SASNTIFSASDD 523
Query: 220 GDARIWDVSLRKCVICL-----SGHTLAVTCV 246
R+WD++ +C+ +GH V C+
Sbjct: 524 TTIRMWDMNSNECIKVFGGMENNGHIGQVQCI 555
Score = 142 (55.0 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 40/140 (28%), Positives = 69/140 (49%)
Query: 211 RRFV-SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETT 269
R+++ + S D +IW + +CV L+GHT V + + +I +G D TIKVW
Sbjct: 393 RKYLMTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVFDNQKLI-SGGLDSTIKVWNYH 451
Query: 270 QGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEM---KKAALERYNKIK- 325
G+ I +GH V S+ T ++ +G+ DHT + + + + N +K
Sbjct: 452 TGQCIATYRGHEDAVVSVDF-TNKSIVSGSADHTVRVWHVDSRTCYTLRGHTDWVNHVKI 510
Query: 326 GNAPERLVSGSDDFTMFLWE 345
+A + S SDD T+ +W+
Sbjct: 511 HSASNTIFSASDDTTIRMWD 530
Score = 136 (52.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 41/143 (28%), Positives = 70/143 (48%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L++GS D T+ +W+ + KT +TGH + V + F D Q + S D +IK+WN T
Sbjct: 396 LMTGSYDTTIKIWKIDSGECVKT-LTGHTKGVRALVF--DNQKLISGGLDSTIKVWNYHT 452
Query: 392 GKFVAVFRGHVGPVYQIRF---ELIYCFRYPSNFYCVVDMSCCMSLYS---W------SA 439
G+ +A +RGH V + F ++ + VD C +L W +
Sbjct: 453 GQCIATYRGHEDAVVSVDFTNKSIVSGSADHTVRVWHVDSRTCYTLRGHTDWVNHVKIHS 512
Query: 440 DSRLLLSGSKDSTLKVWDIRTQK 462
S + S S D+T+++WD+ + +
Sbjct: 513 ASNTIFSASDDTTIRMWDMNSNE 535
Score = 127 (49.8 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 27/80 (33%), Positives = 45/80 (56%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C AT GH +AV+SV F+ + + SGS D TVR+W ++++T + GH +WV +
Sbjct: 454 QCIATYRGHEDAVVSVDFT--NKSIVSGSADHTVRVWHVDSRT-CYTLRGHTDWVNHVKI 510
Query: 159 SADGKHLVSGSKAGELQCWD 178
+ + S S ++ WD
Sbjct: 511 HSASNTIFSASDDTTIRMWD 530
Score = 97 (39.2 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 18/54 (33%), Positives = 35/54 (64%)
Query: 445 LSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L+ + D+T+K+WD+ T K + GH + V+++ + D ++ SG DR++K+W
Sbjct: 642 LTSALDNTIKLWDVATGKCIRTQFGHIEGVWSI--AADTFRIISGAHDRLIKVW 693
Score = 93 (37.8 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 213 FVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGK 272
F++++ D ++WDV+ KC+ GH V + +I +G+ D IKVW+ GK
Sbjct: 641 FLTSALDNTIKLWDVATGKCIRTQFGHIEGVWSIAADTFRII-SGAHDRLIKVWDLQNGK 699
Query: 273 LIRELKGHGHWVNSLALS 290
+ + V+ + LS
Sbjct: 700 CLHTFSNNSS-VSCVGLS 716
Score = 86 (35.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT--PMF---KCTGHKNW 152
+R T+ GHT+ V V + S S DTT+R+WD+N+ +F + GH
Sbjct: 492 SRTCYTLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNECIKVFGGMENNGHIGQ 551
Query: 153 VLCI 156
V CI
Sbjct: 552 VQCI 555
Score = 81 (33.6 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 26/103 (25%), Positives = 48/103 (46%)
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
H ++ + ++ WD TGK GH I G+ W + A R +S + D +
Sbjct: 640 HFLTSALDNTIKLWDVATGKCIRTQF-GH---IEGV-WS---IAADTFRIISGAHDRLIK 691
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVW 266
+WD+ KC+ S ++ +V+CV D G ++ +K++
Sbjct: 692 VWDLQNGKCLHTFSNNS-SVSCVGLS-DSRFVAGLENGEVKMY 732
Score = 77 (32.2 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 256 TGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFD 301
T + D TIK+W+ GK IR GH V S+A T + + +GA D
Sbjct: 643 TSALDNTIKLWDVATGKCIRTQFGHIEGVWSIAADT-FRIISGAHD 687
Score = 69 (29.3 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 20/70 (28%), Positives = 36/70 (51%)
Query: 329 PERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
P ++ + D T+ LW+ A K +T+ GH + V + + D + S + D+ IK+W+
Sbjct: 638 PTHFLTSALDNTIKLWDVATGKCIRTQF-GHIEGVWSI--AADTFRIISGAHDRLIKVWD 694
Query: 389 GTTGKFVAVF 398
GK + F
Sbjct: 695 LQNGKCLHTF 704
Score = 68 (29.0 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 23/79 (29%), Positives = 39/79 (49%)
Query: 377 SASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYC----VVDMSCCM 432
+++ D +IKLW+ TGK + GH+ V+ I + FR S + V D+
Sbjct: 643 TSALDNTIKLWDVATGKCIRTQFGHIEGVWSIAADT---FRIISGAHDRLIKVWDLQNGK 699
Query: 433 SLYSWSADSRLLLSGSKDS 451
L+++S +S + G DS
Sbjct: 700 CLHTFSNNSSVSCVGLSDS 718
Score = 63 (27.2 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 434 LYSWSADSRLLLSGSKDSTLKVWDIRTQK 462
++S +AD+ ++SG+ D +KVWD++ K
Sbjct: 671 VWSIAADTFRIISGAHDRLIKVWDLQNGK 699
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 234 (87.4 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 81/315 (25%), Positives = 141/315 (44%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
+R +N + I G + FSP+ + LA+ +LW + + + GH V
Sbjct: 217 LRSLNNFCSQI-GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNV 275
Query: 154 LCIAW------SADGK--HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
I + S D K +L S + G ++ W + +P + + GH + + W H
Sbjct: 276 GAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVAD-IEGHTVRVARVMW---H 331
Query: 206 LNAPCRRFVSAS-KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTI 263
P RF+ + D R+WD+ ++ ++ GH++ V + + DG + TG D
Sbjct: 332 ---PSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFG 388
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQ---------YSSPEEM 313
+VW+ G+ I L+GH + + S Y + TG+ D+T K Y+ P
Sbjct: 389 RVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ 448
Query: 314 KKAALERYNKIKGNAPERLVSGSDDFTMFLW-EPAVSKQPKTRMTGHQQLVNHVYFSPDG 372
++ I G+ L++G+ D T +W P S P + GH+ V + S DG
Sbjct: 449 NLVTGVKFEPIHGDF---LLTGAYDNTAKIWTHPGWS--PLKTLAGHEGKVMGLDISSDG 503
Query: 373 QWVASASFDKSIKLW 387
Q +A+ S+D++ KLW
Sbjct: 504 QLIATCSYDRTFKLW 518
Score = 171 (65.3 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 66/260 (25%), Positives = 110/260 (42%)
Query: 158 WSADGKHLVSGSKAGELQCWD-PQTGKPSGNPLSGHKKWITGISWEP---VHLNAPCRRF 213
+S + K L + +G + W P + L GH + I + P V L+
Sbjct: 238 FSPNSKMLATACWSGLCKLWSVPDCSLL--HTLRGHNTNVGAIVFHPKSTVSLDQKDVNL 295
Query: 214 VSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGK 272
S + DG ++W + + V + GHT+ V V W G + T D + ++W+ +
Sbjct: 296 ASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQE 355
Query: 273 LIRELKGHGHWVNSLALSTEYALR-TGAFDHTGKQYSSPEEMKKAALERYNK-IKG-N-A 328
I +GH V +A + +L TG D G+ + LE + K I G N +
Sbjct: 356 EILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFS 415
Query: 329 PE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSP-DGQWVASASFDKSIK 385
P + +GS D T +W+ + T + HQ LV V F P G ++ + ++D + K
Sbjct: 416 PNGYHIATGSGDNTCKVWDLRQRRCVYT-IPAHQNLVTGVKFEPIHGDFLLTGAYDNTAK 474
Query: 386 LWNGTTGKFVAVFRGHVGPV 405
+W + GH G V
Sbjct: 475 IWTHPGWSPLKTLAGHEGKV 494
Score = 150 (57.9 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 50/183 (27%), Positives = 83/183 (45%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L S + D ++ LW S +P + GH V V + P G+++ + +D+S +LW+
Sbjct: 295 LASCAADGSVKLWS-LDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEA 353
Query: 392 GKFVAVFRGHVGPVYQIRFELIYCFRYPSN---FYCVVDMS---CCMSL-------Y--S 436
+ + GH VY I F F V D+ C M L Y +
Sbjct: 354 QEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGIN 413
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSP-DGEKVASGGKDRVL 495
+S + + +GS D+T KVWD+R ++ +P H + V V + P G+ + +G D
Sbjct: 414 FSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTA 473
Query: 496 KLW 498
K+W
Sbjct: 474 KIW 476
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 34/136 (25%), Positives = 66/136 (48%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ +R RC + GH + + + FSP+G +A+GSGD T ++WDL + ++ H+
Sbjct: 390 VWDLR-TGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQ 448
Query: 151 NWVLCIAWSA-DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAP 209
N V + + G L++G+ + W P L+GH+ + G+ +++
Sbjct: 449 NLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPL-KTLAGHEGKVMGLD-----ISSD 502
Query: 210 CRRFVSASKDGDARIW 225
+ + S D ++W
Sbjct: 503 GQLIATCSYDRTFKLW 518
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 47/173 (27%), Positives = 74/173 (42%)
Query: 343 LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHV 402
LW+ +++ GH V + F DG + D ++W+ TG+ + GH+
Sbjct: 348 LWD-LEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHL 406
Query: 403 GPVYQIRFELI-YCFRYPS-NFYCVV-DMSCCMSLYSWSADSRL-------------LLS 446
+Y I F Y S + C V D+ +Y+ A L LL+
Sbjct: 407 KEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLT 466
Query: 447 GSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLWM 499
G+ D+T K+W + L GH +V +D S DG+ +A+ DR KLWM
Sbjct: 467 GAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWM 519
>UNIPROTKB|B3MJV8 [details] [associations]
symbol:GF14067 "Ribosome biogenesis protein WDR12 homolog"
species:7217 "Drosophila ananassae" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH902620 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_001963192.1 ProteinModelPortal:B3MJV8 STRING:B3MJV8
EnsemblMetazoa:FBtr0118767 GeneID:6496895 KEGG:dan:Dana_GF14067
FlyBase:FBgn0091094 InParanoid:B3MJV8 Uniprot:B3MJV8
Length = 419
Score = 172 (65.6 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 66/238 (27%), Positives = 109/238 (45%)
Query: 103 TIAGHT---EAVLSVAFSPDGRQLASGSGDTTVRLWDLN----TQTPMFKCTGHKNWVLC 155
TI+GHT +AV ++ + + S S D T LW N T + C GH+ V
Sbjct: 139 TISGHTAPIKAVDWISLDEESGRFVSSSQDQTAMLWQWNVGSNTAECVSVCKGHERGVDS 198
Query: 156 IAWSADGKHLVSGSKAGELQCW-----DPQTG-----KPSG--NP---LSGHKKWITGIS 200
++ S DG+ +GS L+ W D G K SG P L GH++ I+ +
Sbjct: 199 VSVSPDGQRFATGSWDTMLKVWSAELDDAGEGTSKRMKESGVRTPKMTLQGHRESISAVQ 258
Query: 201 WEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQD 260
W ++A ++ S D ++WD+SL +S + + +I T S D
Sbjct: 259 W----MDAST--LLTGSWDHTLKVWDLSLEGIKTEISTNKSIFDASYSNLNRLIVTASAD 312
Query: 261 CTIKVWE--TTQGKLIRELK-GHGHWVNSLALST--EYALRTGAFDHTGKQYS--SPE 311
+++++ T QG ++R GH WV ++ ST E+ +GA+D+ K + SP+
Sbjct: 313 KNLRLYDARTNQGSVVRNTYLGHNAWVQAVMWSTTEEFLFVSGAYDNQNKLWDCRSPK 370
Score = 164 (62.8 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 63/242 (26%), Positives = 110/242 (45%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLW--DLN--------------TQTPM 143
C + GH V SV+ SPDG++ A+GS DT +++W +L+ +TP
Sbjct: 185 CVSVCKGHERGVDSVSVSPDGQRFATGSWDTMLKVWSAELDDAGEGTSKRMKESGVRTPK 244
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
GH+ + + W D L++GS L+ WD + +S +K I S+
Sbjct: 245 MTLQGHRESISAVQWM-DASTLLTGSWDHTLKVWDLSL-EGIKTEISTNKS-IFDASYS- 300
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLS---GHTLAVTCVKWGG--DGVIYTGS 258
+LN R V+AS D + R++D + + + GH V V W + + +G+
Sbjct: 301 -NLN---RLIVTASADKNLRLYDARTNQGSVVRNTYLGHNAWVQAVMWSTTEEFLFVSGA 356
Query: 259 QDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAA 317
D K+W+ K + +L GHG V + + + +G D++ + + S +KA
Sbjct: 357 YDNQNKLWDCRSPKAPLYDLLGHGEKVLDIDWTNPKYIVSGGADNSVRVFKS----RKAV 412
Query: 318 LE 319
+E
Sbjct: 413 VE 414
Score = 145 (56.1 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 61/255 (23%), Positives = 104/255 (40%)
Query: 37 QLSQIVNKLLNNEEKLP--YAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFRI 94
+L+ VN LL ++ P + F + D L L +L + +S E + I Y + F
Sbjct: 38 ELNTFVNTLLQQKDGSPVDFDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVER--FPA 95
Query: 95 RPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL 154
C H + V +V +G+ + +G D T+ +W N + +GH +
Sbjct: 96 PEPQDCLL----HDDWVSAV--KANGKWILTGCYDNTLNIWT-NKGKHILTISGHTAPIK 148
Query: 155 CIAW-SADGK--HLVSGSKAGELQCWDPQTGKPSGNPLS---GHKKWITGISWEPVHLNA 208
+ W S D + VS S+ W G + +S GH++ + +S P
Sbjct: 149 AVDWISLDEESGRFVSSSQDQTAMLWQWNVGSNTAECVSVCKGHERGVDSVSVSP----- 203
Query: 209 PCRRFVSASKDGDARIWDVSL----------------RKCVICLSGHTLAVTCVKWGGDG 252
+RF + S D ++W L R + L GH +++ V+W
Sbjct: 204 DGQRFATGSWDTMLKVWSAELDDAGEGTSKRMKESGVRTPKMTLQGHRESISAVQWMDAS 263
Query: 253 VIYTGSQDCTIKVWE 267
+ TGS D T+KVW+
Sbjct: 264 TLLTGSWDHTLKVWD 278
Score = 144 (55.7 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 57/229 (24%), Positives = 105/229 (45%)
Query: 280 HGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEM------KKAALERYNKIKGNAPE-RL 332
H WV+++ + ++ L TG +D+T +++ + A ++ + I + R
Sbjct: 104 HDDWVSAVKANGKWIL-TGCYDNTLNIWTNKGKHILTISGHTAPIKAVDWISLDEESGRF 162
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMT---GHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
VS S D T LW+ V ++ GH++ V+ V SPDGQ A+ S+D +K+W+
Sbjct: 163 VSSSQDQTAMLWQWNVGSNTAECVSVCKGHERGVDSVSVSPDGQRFATGSWDTMLKVWSA 222
Query: 390 TTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSK 449
G G +++ + R P + +S W D+ LL+GS
Sbjct: 223 ELDD-----AGE-GTSKRMKESGV---RTPK--MTLQGHRESISAVQWM-DASTLLTGSW 270
Query: 450 DSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
D TLKVWD+ + +K ++ + +F +S + + D+ L+L+
Sbjct: 271 DHTLKVWDLSLEGIKTEISTNKS-IFDASYSNLNRLIVTASADKNLRLY 318
Score = 106 (42.4 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 44/179 (24%), Positives = 78/179 (43%)
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKWGG----DGVIYTGSQDCTIKVWETTQGKLI 274
D IW + K ++ +SGHT + V W G + SQD T +W+ G
Sbjct: 124 DNTLNIW-TNKGKHILTISGHTAPIKAVDWISLDEESGRFVSSSQDQTAMLWQWNVGSNT 182
Query: 275 REL----KGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP 329
E KGH V+S+++S + TG++D K +S+ E+ A +G +
Sbjct: 183 AECVSVCKGHERGVDSVSVSPDGQRFATGSWDTMLKVWSA--ELDDAG-------EGTSK 233
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
SG + PK + GH++ ++ V + D + + S+D ++K+W+
Sbjct: 234 RMKESGV-------------RTPKMTLQGHRESISAVQWM-DASTLLTGSWDHTLKVWD 278
Score = 105 (42.0 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 437 WSADSRLL-LSGSKDSTLKVWDIRTQKLK-QDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
WS L +SG+ D+ K+WD R+ K DL GH ++V +DW+ + + + SGG D
Sbjct: 344 WSTTEEFLFVSGAYDNQNKLWDCRSPKAPLYDLLGHGEKVLDIDWT-NPKYIVSGGADNS 402
Query: 495 LKLW 498
++++
Sbjct: 403 VRVF 406
Score = 84 (34.6 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 24/67 (35%), Positives = 36/67 (53%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQK---LKQDLPGHADEVFAVDWSPDGEKV-ASGGK 491
S+S +RL+++ S D L+++D RT + ++ GH V AV WS E + SG
Sbjct: 298 SYSNLNRLIVTASADKNLRLYDARTNQGSVVRNTYLGHNAWVQAVMWSTTEEFLFVSGAY 357
Query: 492 DRVLKLW 498
D KLW
Sbjct: 358 DNQNKLW 364
Score = 70 (29.7 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 24/95 (25%), Positives = 50/95 (52%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L++GS D T+ +W+ ++ + KT ++ ++ + + Y S + + +AS DK+++L++ T
Sbjct: 265 LLTGSWDHTLKVWDLSL-EGIKTEISTNKSIFDASY-SNLNRLIVTASADKNLRLYDART 322
Query: 392 --GKFVA-VFRGHVGPVYQIRFELIYCFRYPSNFY 423
G V + GH V + + F + S Y
Sbjct: 323 NQGSVVRNTYLGHNAWVQAVMWSTTEEFLFVSGAY 357
>POMBASE|SPAC25H1.08c [details] [associations]
symbol:SPAC25H1.08c "ribosome biogenesis protein Sqt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
"ribosomal large subunit assembly" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC25H1.08c GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 HOGENOM:HOG000261676 GO:GO:0000027 HSSP:Q04724
KO:K14818 OrthoDB:EOG45TGWZ PIR:T38388 RefSeq:NP_593812.1
ProteinModelPortal:O13982 STRING:O13982 PRIDE:O13982
EnsemblFungi:SPAC25H1.08c.1 GeneID:2542715 KEGG:spo:SPAC25H1.08c
OMA:PICACAS NextBio:20803763 Uniprot:O13982
Length = 399
Score = 184 (69.8 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 51/170 (30%), Positives = 78/170 (45%)
Query: 107 HTEAVLSVAFSPDGRQL-ASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
H ++V SV+ +P L ASG GD +WD+ T + + TGHK+ ++ I WS DG ++
Sbjct: 60 HKDSVFSVSINPVHSNLCASGGGDDLGYIWDITTGEQICQLTGHKDSIVAIDWSFDGTYI 119
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS-KDGDARI 224
+G +++ W TG + I +SW P L F++A DG +
Sbjct: 120 ATGGMDSQVRLWKSSTGFEFITAFETVDE-IVWLSWHPKGL------FLAAGCNDGSIWM 172
Query: 225 WDVSLRKCVICLSGHTLAVTCVKWGGDGV---IYTGSQDCTIKVWETTQG 271
W + K V + GHT V K+ GV + T T+ VW G
Sbjct: 173 WSLPSGKVVQVMYGHTAPVNAGKFIPPGVGKRLATVDDSGTLIVWNPATG 222
Score = 165 (63.1 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 64/303 (21%), Positives = 121/303 (39%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH ++++++ +S DG +A+G D+ VRLW +T + ++ ++W G
Sbjct: 100 LTGHKDSIVAIDWSFDGTYIATGGMDSQVRLWKSSTGFEFITAFETVDEIVWLSWHPKGL 159
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
L +G G + W +GK + GH + + P + +R + G
Sbjct: 160 FLAAGCNDGSIWMWSLPSGKVV-QVMYGHTAPVNAGKFIPPGVG---KRLATVDDSGTLI 215
Query: 224 IWD--VSLRKCVICLSGHTL----AVTCVKW-----GGDG-VIYTGSQDCTIKVWETTQG 271
+W+ +C + H T W +G V++ G +KV
Sbjct: 216 VWNPATGAPECRMSSDDHRFDPGNEETAAGWTSFDCNAEGNVLFLGGSSGKVKVVNINSS 275
Query: 272 KLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAALERYN-----KIK 325
++ L+ V ++AL T + + D T Y S + +L K
Sbjct: 276 HILASLEAQTESVEAIALCTALPICACASVDGTVALYDSASLKFRKSLPHEQAVIDCKFL 335
Query: 326 GNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
N P L++ D + W+ S Q TGHQ+ + + +PDG+ V + S D +
Sbjct: 336 PNTPY-LLTACADCVIRKWDVR-SGQLLGEYTGHQEPILCMAITPDGKRVVTGSDDTELL 393
Query: 386 LWN 388
+++
Sbjct: 394 VFD 396
Score = 129 (50.5 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 441 SRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
S L SG D +WDI T + L GH D + A+DWS DG +A+GG D ++LW
Sbjct: 74 SNLCASGGGDDLGYIWDITTGEQICQLTGHKDSIVAIDWSFDGTYIATGGMDSQVRLW 131
Score = 102 (41.0 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 19/66 (28%), Positives = 37/66 (56%)
Query: 334 SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG- 392
SG D ++W+ +Q ++TGH+ + + +S DG ++A+ D ++LW +TG
Sbjct: 79 SGGGDDLGYIWDITTGEQI-CQLTGHKDSIVAIDWSFDGTYIATGGMDSQVRLWKSSTGF 137
Query: 393 KFVAVF 398
+F+ F
Sbjct: 138 EFITAF 143
Score = 94 (38.1 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 41/156 (26%), Positives = 68/156 (43%)
Query: 245 CVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHT 303
C GGD + Y +W+ T G+ I +L GH + ++ S + + TG D
Sbjct: 77 CASGGGDDLGY---------IWDITTGEQICQLTGHKDSIVAIDWSFDGTYIATGGMDSQ 127
Query: 304 GKQYSSPEEMKK-AALERYNKIKGNA--PERL--VSGSDDFTMFLWEPAVSKQPKTRMTG 358
+ + S + A E ++I + P+ L +G +D ++++W K + M G
Sbjct: 128 VRLWKSSTGFEFITAFETVDEIVWLSWHPKGLFLAAGCNDGSIWMWSLPSGKVVQV-MYG 186
Query: 359 HQQLVNHVYFSPDGQWVASASFDKS--IKLWNGTTG 392
H VN F P G A+ D S + +WN TG
Sbjct: 187 HTAPVNAGKFIPPGVGKRLATVDDSGTLIVWNPATG 222
Score = 92 (37.4 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 444 LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL 495
LL+ D ++ WD+R+ +L + GH + + + +PDG++V +G D L
Sbjct: 341 LLTACADCVIRKWDVRSGQLLGEYTGHQEPILCMAITPDGKRVVTGSDDTEL 392
Score = 82 (33.9 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+ +G D + LW+ + + T ++V + + P G ++A+ D SI +W+ +
Sbjct: 119 IATGGMDSQVRLWKSSTGFEFITAFETVDEIV-WLSWHPKGLFLAAGCNDGSIWMWSLPS 177
Query: 392 GKFVAVFRGHVGPVYQIRF 410
GK V V GH PV +F
Sbjct: 178 GKVVQVMYGHTAPVNAGKF 196
Score = 73 (30.8 bits), Expect = 4.3e-15, Sum P(3) = 4.3e-15
Identities = 20/70 (28%), Positives = 36/70 (51%)
Query: 336 SDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFV 395
S D T+ L++ A K K+ H+Q V F P+ ++ +A D I+ W+ +G+ +
Sbjct: 304 SVDGTVALYDSASLKFRKS--LPHEQAVIDCKFLPNTPYLLTACADCVIRKWDVRSGQLL 361
Query: 396 AVFRGHVGPV 405
+ GH P+
Sbjct: 362 GEYTGHQEPI 371
Score = 53 (23.7 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 448 SKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
S D T+ ++D + K ++ LP H V + P+ + + D V++ W
Sbjct: 304 SVDGTVALYDSASLKFRKSLP-HEQAVIDCKFLPNTPYLLTACADCVIRKW 353
Score = 41 (19.5 bits), Expect = 4.3e-15, Sum P(3) = 4.3e-15
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 431 CMSLYSWSADSRLLLSGSKDSTLKVWD 457
CM++ + D + +++GS D+ L V+D
Sbjct: 373 CMAI---TPDGKRVVTGSDDTELLVFD 396
>FB|FBgn0032298 [details] [associations]
symbol:CG6724 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005654 EMBL:AE014134
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 HSSP:P63005 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029
GeneTree:ENSGT00640000091456 EMBL:AY118871 RefSeq:NP_609452.1
UniGene:Dm.37812 ProteinModelPortal:Q9VKQ3 SMR:Q9VKQ3 IntAct:Q9VKQ3
MINT:MINT-818926 STRING:Q9VKQ3 PaxDb:Q9VKQ3 PRIDE:Q9VKQ3
EnsemblMetazoa:FBtr0080191 GeneID:34488 KEGG:dme:Dmel_CG6724
UCSC:CG6724-RA FlyBase:FBgn0032298 InParanoid:Q9VKQ3
PhylomeDB:Q9VKQ3 GenomeRNAi:34488 NextBio:788731 Bgee:Q9VKQ3
Uniprot:Q9VKQ3
Length = 420
Score = 162 (62.1 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 63/240 (26%), Positives = 107/240 (44%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLW--DLN--------------TQTPM 143
C + GH V SV+ SPDG + A+GS DT +++W +L+ +TP
Sbjct: 186 CVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVWSAELDDAVEGSSKRMKESGVRTPK 245
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
GH+ V + W D L++GS L+ WD + +S +K I S+
Sbjct: 246 ITLQGHRESVSAVQWM-DATTLLTGSWDHTLKVWDLSL-EGIKTEISTNKS-IFDASYSK 302
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLS---GHTLAVTCVKWGG--DGVIYTGS 258
LN R ++AS D + R++D + + + GH V V W + + +G+
Sbjct: 303 --LN---RLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGA 357
Query: 259 QDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAA 317
D K+W+ K + +L GHG V + S + +G D+T + + S + + + A
Sbjct: 358 YDNQNKLWDCRSPKAPLYDLLGHGEKVLDIDWSNPKYIVSGGVDNTVRVFKSRKALAEEA 417
Score = 143 (55.4 bits), Expect = 1.5e-16, Sum P(3) = 1.5e-16
Identities = 66/256 (25%), Positives = 102/256 (39%)
Query: 37 QLSQIVNKLLNNEE---KLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFR 93
+L+ VN LL ++ + F + D L L +L + +S E + I Y + F
Sbjct: 38 ELNTFVNALLRQKDGSSDTDFDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVER--FP 95
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
C H + V +V G+ + SG D T+ LW N + +GH +
Sbjct: 96 APEPQDCLL----HDDWVSAV--KARGKWILSGCYDNTLNLWT-NKGKHILTISGHTAPI 148
Query: 154 LCIAW-SADGK--HLVSGSKAGELQCWDPQTGKPSGNPLS---GHKKWITGISWEPVHLN 207
+ W S D + VS S+ W G S +S GH++ + +S P L
Sbjct: 149 KAVDWISLDEETGRFVSTSQDQTAMLWQWNVGSNSVECVSVCKGHERGVDSVSVSPDGL- 207
Query: 208 APCRRFVSASKDGDARIWDVSLRKCV----------------ICLSGHTLAVTCVKWGGD 251
RF + S D ++W L V I L GH +V+ V+W
Sbjct: 208 ----RFATGSWDTMLKVWSAELDDAVEGSSKRMKESGVRTPKITLQGHRESVSAVQWMDA 263
Query: 252 GVIYTGSQDCTIKVWE 267
+ TGS D T+KVW+
Sbjct: 264 TTLLTGSWDHTLKVWD 279
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 55/229 (24%), Positives = 102/229 (44%)
Query: 280 HGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEM------KKAALERYNKIK-GNAPERL 332
H WV+++ ++ L +G +D+T +++ + A ++ + I R
Sbjct: 105 HDDWVSAVKARGKWIL-SGCYDNTLNLWTNKGKHILTISGHTAPIKAVDWISLDEETGRF 163
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMT---GHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
VS S D T LW+ V ++ GH++ V+ V SPDG A+ S+D +K+W+
Sbjct: 164 VSTSQDQTAMLWQWNVGSNSVECVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVWSA 223
Query: 390 TTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSK 449
V G +++ + R P + +S W D+ LL+GS
Sbjct: 224 ELDDAVE------GSSKRMKESGV---RTPK--ITLQGHRESVSAVQWM-DATTLLTGSW 271
Query: 450 DSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
D TLKVWD+ + +K ++ + +F +S + + D+ L+L+
Sbjct: 272 DHTLKVWDLSLEGIKTEISTNKS-IFDASYSKLNRLILTASADKNLRLY 319
Score = 124 (48.7 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 56/213 (26%), Positives = 92/213 (43%)
Query: 103 TIAGHT---EAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT----GHKNWVLC 155
TI+GHT +AV ++ + + S S D T LW N + +C GH+ V
Sbjct: 140 TISGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWQWNVGSNSVECVSVCKGHERGVDS 199
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWI--TGISWEPVHLNAPCRRF 213
++ S DG +GS L+ W + + + G K + +G+ + L R
Sbjct: 200 VSVSPDGLRFATGSWDTMLKVWSAELD----DAVEGSSKRMKESGVRTPKITLQGH-RES 254
Query: 214 VSASKDGDARI-----WDVSLRKCVICLSGHTLAVTCVKWGGDG-------VIYTGSQDC 261
VSA + DA WD +L+ + L G ++ K D +I T S D
Sbjct: 255 VSAVQWMDATTLLTGSWDHTLKVWDLSLEGIKTEISTNKSIFDASYSKLNRLILTASADK 314
Query: 262 TIKVWE--TTQGKLIRELK-GHGHWVNSLALST 291
+++++ T QG ++R GH WV ++ ST
Sbjct: 315 NLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWST 347
Score = 109 (43.4 bits), Expect = 1.5e-16, Sum P(3) = 1.5e-16
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 437 WSADSRLL-LSGSKDSTLKVWDIRTQKLK-QDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
WS L +SG+ D+ K+WD R+ K DL GH ++V +DWS + + + SGG D
Sbjct: 345 WSTTEEFLFVSGAYDNQNKLWDCRSPKAPLYDLLGHGEKVLDIDWS-NPKYIVSGGVDNT 403
Query: 495 LKLW 498
++++
Sbjct: 404 VRVF 407
Score = 109 (43.4 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 50/207 (24%), Positives = 93/207 (44%)
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG- 250
H W++ + A + +S D +W + K ++ +SGHT + V W
Sbjct: 105 HDDWVSAVK-------ARGKWILSGCYDNTLNLW-TNKGKHILTISGHTAPIKAVDWISL 156
Query: 251 D---GVIYTGSQDCTIKVWETTQG----KLIRELKGHGHWVNSLALSTEYALR--TGAFD 301
D G + SQD T +W+ G + + KGH V+S+++S + LR TG++D
Sbjct: 157 DEETGRFVSTSQDQTAMLWQWNVGSNSVECVSVCKGHERGVDSVSVSPD-GLRFATGSWD 215
Query: 302 HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
K +S+ E+ A ++G++ SG + PK + GH++
Sbjct: 216 TMLKVWSA--ELDDA-------VEGSSKRMKESGV-------------RTPKITLQGHRE 253
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWN 388
V+ V + D + + S+D ++K+W+
Sbjct: 254 SVSAVQWM-DATTLLTGSWDHTLKVWD 279
Score = 82 (33.9 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQK---LKQDLPGHADEVFAVDWSPDGEKV-ASGGK 491
S+S +RL+L+ S D L+++D RT + ++ GH V V WS E + SG
Sbjct: 299 SYSKLNRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAY 358
Query: 492 DRVLKLW 498
D KLW
Sbjct: 359 DNQNKLW 365
Score = 68 (29.0 bits), Expect = 1.5e-16, Sum P(3) = 1.5e-16
Identities = 24/95 (25%), Positives = 50/95 (52%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L++GS D T+ +W+ ++ + KT ++ ++ + + Y S + + +AS DK+++L++ T
Sbjct: 266 LLTGSWDHTLKVWDLSL-EGIKTEISTNKSIFDASY-SKLNRLILTASADKNLRLYDPRT 323
Query: 392 --GKFVA-VFRGHVGPVYQIRFELIYCFRYPSNFY 423
G V + GH V + + F + S Y
Sbjct: 324 NQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAY 358
Score = 40 (19.1 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 8/23 (34%), Positives = 16/23 (69%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIR 459
WS + + ++SG D+T++V+ R
Sbjct: 389 WS-NPKYIVSGGVDNTVRVFKSR 410
>UNIPROTKB|E2RNA4 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070545 "PeBoW complex" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
CTD:55759 GeneTree:ENSGT00640000091456 EMBL:AAEX03018031
RefSeq:XP_536036.3 Ensembl:ENSCAFT00000019894 GeneID:478876
KEGG:cfa:478876 Uniprot:E2RNA4
Length = 423
Score = 231 (86.4 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 53/161 (32%), Positives = 85/161 (52%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GH EA+ SV +S D ++ S S D T+R+WD+ + + TG+K + CI++S
Sbjct: 252 TLSGHKEAISSVLWS-DAEEICSASWDHTIRVWDVESGSLKSTLTGNKVFN-CISYSPLC 309
Query: 163 KHLVSGSKAGELQCWDPQT--GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
K L SGS ++ WDP+T G L+ H W+T + W P H ++ +S S D
Sbjct: 310 KRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKWSPTHE----QQLISGSLDN 365
Query: 221 DARIWDV-SLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQD 260
++WD S + + L+ H V V W G++ +G D
Sbjct: 366 IVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGAD 406
Score = 177 (67.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 64/234 (27%), Positives = 110/234 (47%)
Query: 280 HGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG-------NAPERL 332
H W++S+ + E+ L TG++D T + +S + + + +K N L
Sbjct: 100 HDDWISSVRGAEEWIL-TGSYDKTSRIWSLEGKSIMTIVGHTDVVKDVAWVKKDNLSCLL 158
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRM---TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
+S S D T+ LWE V + + GH V+ + G S S+DK +K+W+
Sbjct: 159 LSSSMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDSTGTKFCSGSWDKMLKIWSA 218
Query: 390 T-TGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSC---CMSLYSWSADSRLLL 445
T + + P + + E + R P +V +S +S WS D+ +
Sbjct: 219 VPTDEEDELEEPTNRPRKKQKTEQLGLTRTP-----IVTLSGHKEAISSVLWS-DAEEIC 272
Query: 446 SGSKDSTLKVWDIRTQKLKQDLPGHADEVF-AVDWSPDGEKVASGGKDRVLKLW 498
S S D T++VWD+ + LK L G+ +VF + +SP +++ASG DR ++LW
Sbjct: 273 SASWDHTIRVWDVESGSLKSTLTGN--KVFNCISYSPLCKRLASGSTDRHIRLW 324
Score = 171 (65.3 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 53/176 (30%), Positives = 87/176 (49%)
Query: 139 TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG 198
T+TP+ +GHK + + WS D + + S S ++ WD ++G L+G+K +
Sbjct: 246 TRTPIVTLSGHKEAISSVLWS-DAEEICSASWDHTIRVWDVESGSLKST-LTGNKVF-NC 302
Query: 199 ISWEPVHLNAPCRRFVSASKDGDARIWDVSLRK-CVICLS--GHTLAVTCVKWGG--DGV 253
IS+ P+ C+R S S D R+WD + ++ LS HT VT +KW +
Sbjct: 303 ISYSPL-----CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKWSPTHEQQ 357
Query: 254 IYTGSQDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS 308
+ +GS D +K+W+T K + +L H V S+ + L +G D+ K YS
Sbjct: 358 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADN--KLYS 411
Score = 136 (52.9 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 62/275 (22%), Positives = 120/275 (43%)
Query: 145 KCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV 204
+C H +W+ + + + +++GS + W + GK S + GH + ++W
Sbjct: 96 QCLFHDDWISSVRGAEEW--ILTGSYDKTSRIWSLE-GK-SIMTIVGHTDVVKDVAWVKK 151
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLR----KCVICLSGHTLAVTCVKWGGDGVIY-TGSQ 259
N C +S+S D +W+ ++ K + C GH +V + G + +GS
Sbjct: 152 D-NLSCL-LLSSSMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDSTGTKFCSGSW 209
Query: 260 DCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHTGKQYSSPEEMKKAAL 318
D +K+W EL+ + + + L RT +G +
Sbjct: 210 DKMLKIWSAVPTDEEDELEEPTNRPRKKQKTEQLGLTRTPIVTLSGHK------------ 257
Query: 319 ERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASA 378
E + + + E + S S D T+ +W+ S K+ +TG++ + N + +SP + +AS
Sbjct: 258 EAISSVLWSDAEEICSASWDHTIRVWD-VESGSLKSTLTGNK-VFNCISYSPLCKRLASG 315
Query: 379 SFDKSIKLWNGTT--GKFVAV-FRGHVGPVYQIRF 410
S D+ I+LW+ T G V++ H G V +++
Sbjct: 316 STDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKW 350
Score = 135 (52.6 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMF---KCTGHKNWVLCIAW 158
+T+ G+ + +++SP ++LASGS D +RLWD T+ T H WV + W
Sbjct: 292 STLTGN-KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKW 350
Query: 159 S-ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
S + L+SGS ++ WD ++ K L+ H+ + + W
Sbjct: 351 SPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDW 394
Score = 113 (44.8 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 26/61 (42%), Positives = 36/61 (59%)
Query: 437 WS-ADSRLLLSGSKDSTLKVWDIRTQKLK-QDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
WS + L+SGS D+ +K+WD R+ K DL H D+V +VDW+ G + SGG D
Sbjct: 350 WSPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTG-LLLSGGADNK 408
Query: 495 L 495
L
Sbjct: 409 L 409
Score = 112 (44.5 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 54/210 (25%), Positives = 91/210 (43%)
Query: 26 PMYFPQNAGPQQLSQIVNKLLN--NE--EKLPYAFYISDHELLVPLGSYLEKHKVSVEKV 81
P P + LS I+NKLL NE + + + F I L +PL ++E +S E+V
Sbjct: 21 PFSIPAASEIADLSNIINKLLEAKNEFHKHVEFDFLIKGQFLRLPLLKHMELENISSEEV 80
Query: 82 LSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
+ + Y + + +C H + + SV + + + +GS D T R+W L ++
Sbjct: 81 VELEYVEK--YTAPQPEQCLF----HDDWISSVRGAEEW--ILTGSYDKTSRIWSLEGKS 132
Query: 142 PMFKCTGHKNWVLCIAW-SADGKH--LVSGSKAGELQCWDPQTGKPSGNPLS---GHKKW 195
M GH + V +AW D L+S S + W+ + L GH
Sbjct: 133 IM-TIVGHTDVVKDVAWVKKDNLSCLLLSSSMDQTILLWEWNVERNKVKALHCCRGH--- 188
Query: 196 ITGISWEPVHLNAPCRRFVSASKDGDARIW 225
G S + + +++ +F S S D +IW
Sbjct: 189 -AG-SVDSIAVDSTGTKFCSGSWDKMLKIW 216
Score = 103 (41.3 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 40/163 (24%), Positives = 74/163 (45%)
Query: 230 RKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL 289
R ++ LSGH A++ V W I + S D TI+VW+ G L L G+ + N ++
Sbjct: 247 RTPIVTLSGHKEAISSVLWSDAEEICSASWDHTIRVWDVESGSLKSTLTGNKVF-NCISY 305
Query: 290 STEYA-LRTGAFDHTGKQY---SSPEEMKKAALERYN----KIKGNAP--ERLVSGSDDF 339
S L +G+ D + + + + +L + +K + ++L+SGS D
Sbjct: 306 SPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKWSPTHEQQLISGSLDN 365
Query: 340 TMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
+ LW+ K P + H+ V V ++ G ++ + +K
Sbjct: 366 IVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNK 408
Score = 102 (41.0 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 24/67 (35%), Positives = 37/67 (55%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQK---LKQDLPGHADEVFAVDWSPDGEK-VASGGK 491
S+S + L SGS D +++WD RT+ + L H V ++ WSP E+ + SG
Sbjct: 304 SYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKWSPTHEQQLISGSL 363
Query: 492 DRVLKLW 498
D ++KLW
Sbjct: 364 DNIVKLW 370
Score = 99 (39.9 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 34/120 (28%), Positives = 55/120 (45%)
Query: 277 LKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG---NAP--ER 331
L GH ++S+ S + + ++DHT + + K+ L NK+ +P +R
Sbjct: 253 LSGHKEAISSVLWSDAEEICSASWDHTIRVWDVESGSLKSTLTG-NKVFNCISYSPLCKR 311
Query: 332 LVSGSDDFTMFLWEPAVSKQP--KTRMTGHQQLVNHVYFSPDG-QWVASASFDKSIKLWN 388
L SGS D + LW+P +T H V + +SP Q + S S D +KLW+
Sbjct: 312 LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKWSPTHEQQLISGSLDNIVKLWD 371
>UNIPROTKB|F1Q410 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000010576 Uniprot:F1Q410
Length = 1258
Score = 173 (66.0 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 45/190 (23%), Positives = 90/190 (47%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
N + HT+AV FS DG+++AS D T++++ T + + H++ VLC A
Sbjct: 613 NLSRLVVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCA 672
Query: 158 WSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSAS 217
+S D + + + S +++ W+ TG + H + + + N+ +AS
Sbjct: 673 FSTDDRFIATCSVDKKVKIWNSMTGGLV-HVYDEHSEQVNCCHFTN---NSHYLLLATAS 728
Query: 218 KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTG-SQDCTIKVWETTQGKLIRE 276
D ++WD++ ++C + GHT +V ++ D + S D T+K+W+ +
Sbjct: 729 SDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANERKS 788
Query: 277 LKGHGHWVNS 286
+ ++NS
Sbjct: 789 INVKQFFLNS 798
Score = 170 (64.9 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 58/185 (31%), Positives = 83/185 (44%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVL----- 154
C T+ GHT +V FSPD + LAS S D T++LWD+ + K K + L
Sbjct: 743 CRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANER-KSINVKQFFLNSEEP 801
Query: 155 ---------CIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
C +WSADG ++ +K ++ +D TG +GH I + P +
Sbjct: 802 QEDMEVIVKCCSWSADGTRIMVAAK-NKIFLFDIHTGGLLAEIHTGHHSTIQYCDFSPQN 860
Query: 206 LNAPCRRFVSASKDGDARIWDV-SLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTI 263
A V A +W++ S K C GH V CV + DG + T S D TI
Sbjct: 861 HLA-----VVALSQCCVELWNMDSCLKVADC-RGHLSWVHCVMFSPDGSSFLTSSDDQTI 914
Query: 264 KVWET 268
++WET
Sbjct: 915 RLWET 919
Score = 156 (60.0 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 54/213 (25%), Positives = 92/213 (43%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
NR + GH + V + F+ DG+ L S S D+++++W+ ++ +F H+ V
Sbjct: 1001 NRIFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYVF-LQAHQETVKDFK 1059
Query: 158 WSADGKHLVSGSKAGELQ-CWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSA 216
+ K L+S S G ++ W TG+ + + H+ + P +F S
Sbjct: 1060 LLKNSK-LLSWSFDGTVKKIWSIITGRIEKDFVC-HQDTVLSCDISP-----DATKFSST 1112
Query: 217 SKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIR 275
S D A+IW L + L GH V C + D + TG + I++W + G+L+
Sbjct: 1113 SADKTAKIWSFELLSPLHELRGHKGCVRCSVFSVDSTLLATGDDNGEIRIWNVSNGELLH 1172
Query: 276 EL------KG---HGHWVNSLALSTEYALRTGA 299
+G HG WV L S + + A
Sbjct: 1173 LCAPILVEEGAATHGGWVTDLCFSPDSKMLVSA 1205
Score = 156 (60.0 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 73/271 (26%), Positives = 116/271 (42%)
Query: 239 HTLAV--TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA-L 295
HT AV C G + G D T++V++ G+ + E+K H V A ST+ +
Sbjct: 622 HTDAVYHACFSEDGQRIASCGV-DKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFI 680
Query: 296 RTGAFDHTGKQYSSPE----EMKKAALERYN--KIKGNAPERLVS-GSDDFTMFLWEPAV 348
T + D K ++S + E+ N N+ L++ S D + LW+
Sbjct: 681 ATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWD-LN 739
Query: 349 SKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQI 408
K+ + M GH VNH FSPD + +AS S D ++KLW+ + A R + V Q
Sbjct: 740 QKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKS----ANERKSIN-VKQF 794
Query: 409 RFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDL- 467
P V+ + CC SWSAD ++ +K+ ++DI T L ++
Sbjct: 795 FLNS----EEPQEDMEVI-VKCC----SWSADGTRIMVAAKNKIF-LFDIHTGGLLAEIH 844
Query: 468 PGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
GH + D+SP ++LW
Sbjct: 845 TGHHSTIQYCDFSPQNHLAVVALSQCCVELW 875
Score = 152 (58.6 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 73/309 (23%), Positives = 122/309 (39%)
Query: 106 GHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
GH + FSP V LW++++ + C GH +WV C+ +S DG
Sbjct: 846 GHHSTIQYCDFSPQNHLAVVALSQCCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSF 905
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWE-PVHLNAP--CRRF-VSASKDGD 221
++ S ++ W+ T K N K+ I + E V + A +R + K G
Sbjct: 906 LTSSDDQTIRLWE--TKKVCKNSAIVLKQEIDVVFQENEVMVLAVDNIKRLQLINGKTGQ 963
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHG 281
+ C CLS H + + +GG+ D +++ E ++ + GH
Sbjct: 964 IDYLIEAQVSCC-CLSPH---LQYIAFGGE--------DGAVEILELLNNRIFQSRIGHK 1011
Query: 282 HWVNSLALSTEYALRTGAFDHTGKQ---YSSPEEM-KKAALERYNKIKGNAPERLVSGSD 337
V + + + + D + Q + S E + +A E K +L+S S
Sbjct: 1012 KTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYVFLQAHQETVKDFKLLKNSKLLSWSF 1071
Query: 338 DFTMF-LWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVA 396
D T+ +W + K + HQ V SPD +S S DK+ K+W+ +
Sbjct: 1072 DGTVKKIWSIITGRIEKDFVC-HQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSPLH 1130
Query: 397 VFRGHVGPV 405
RGH G V
Sbjct: 1131 ELRGHKGCV 1139
Score = 119 (46.9 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 46/184 (25%), Positives = 85/184 (46%)
Query: 335 GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKF 394
G +D + + E ++ ++R+ GH++ V H+ F+ DG+ + S+S D SI++WN + ++
Sbjct: 987 GGEDGAVEILELLNNRIFQSRI-GHKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEEY 1045
Query: 395 VAVFRGHVGPVYQIRF----ELI-YCF-------------RYPSNFYCVVD--MSCCMSL 434
V + + H V + +L+ + F R +F C D +SC +S
Sbjct: 1046 VFL-QAHQETVKDFKLLKNSKLLSWSFDGTVKKIWSIITGRIEKDFVCHQDTVLSCDIS- 1103
Query: 435 YSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
D+ S S D T K+W +L GH V +S D +A+G +
Sbjct: 1104 ----PDATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSVFSVDSTLLATGDDNGE 1159
Query: 495 LKLW 498
+++W
Sbjct: 1160 IRIW 1163
Score = 104 (41.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 43/196 (21%), Positives = 85/196 (43%)
Query: 208 APCRRFVS-ASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKV 265
+P ++++ +DG I ++ + GH V +++ DG + + S D +I+V
Sbjct: 978 SPHLQYIAFGGEDGAVEILELLNNRIFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQV 1037
Query: 266 WETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSS--PEEMKKAALERYNK 323
W + + L+ H V L L + +FD T K+ S ++K + +
Sbjct: 1038 WNWQSEEYVF-LQAHQETVKDFKLLKNSKLLSWSFDGTVKKIWSIITGRIEKDFVCHQDT 1096
Query: 324 IKGN--APE--RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+ +P+ + S S D T +W + P + GH+ V FS D +A+
Sbjct: 1097 VLSCDISPDATKFSSTSADKTAKIWSFELLS-PLHELRGHKGCVRCSVFSVDSTLLATGD 1155
Query: 380 FDKSIKLWNGTTGKFV 395
+ I++WN + G+ +
Sbjct: 1156 DNGEIRIWNVSNGELL 1171
Score = 85 (35.0 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 21/62 (33%), Positives = 30/62 (48%)
Query: 77 SVEKVLSIVYQPQAVFRIRPVNRCS--ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRL 134
S + L++V Q + ++ C A GH V V FSPDG + S D T+RL
Sbjct: 857 SPQNHLAVVALSQCCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRL 916
Query: 135 WD 136
W+
Sbjct: 917 WE 918
Score = 84 (34.6 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 43/192 (22%), Positives = 78/192 (40%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK-LWNGT 390
L+S SDD ++ +W + + HQ+ V + + + S SFD ++K +W+
Sbjct: 1026 LISSSDDSSIQVWN--WQSEEYVFLQAHQETVKDFKLLKNSK-LLSWSFDGTVKKIWSII 1082
Query: 391 TGKFVAVFRGHVGPVYQI-------RFEL--------IYCFRYPSNFYCVVDMSCCMSLY 435
TG+ F H V +F I+ F S + + C+
Sbjct: 1083 TGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCS 1142
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQKL---------KQDLPGHADEVFAVDWSPDGEKV 486
+S DS LL +G + +++W++ +L ++ H V + +SPD + +
Sbjct: 1143 VFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPILVEEGAATHGGWVTDLCFSPDSKML 1202
Query: 487 ASGGKDRVLKLW 498
S G LK W
Sbjct: 1203 VSAGG--YLKWW 1212
Score = 73 (30.8 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 15/62 (24%), Positives = 29/62 (46%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
+S + L + +++W++ + D GH V V +SPDG + D+ ++
Sbjct: 856 FSPQNHLAVVALSQCCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIR 915
Query: 497 LW 498
LW
Sbjct: 916 LW 917
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 237 (88.5 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 58/202 (28%), Positives = 95/202 (47%)
Query: 107 HTEAVLSVAFS-PDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHL 165
H+ AV + R L +G D V LW + + GH + + + + A +
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLV 74
Query: 166 VSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIW 225
+G+ +G ++ WD + K L+GH+ +++ P F S S D + +IW
Sbjct: 75 AAGAASGTIKLWDLEEAKVV-RTLTGHRSNCVSVNFHPFG-----EFFASGSLDTNLKIW 128
Query: 226 DVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQGKLIRELKGHGHWV 284
D+ + C+ GHT V +++ DG I +G +D +KVW+ T GKL+ E K H +
Sbjct: 129 DIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKI 188
Query: 285 NSLALST-EYALRTGAFDHTGK 305
SL E+ L TG+ D T K
Sbjct: 189 QSLDFHPHEFLLATGSADKTVK 210
Score = 196 (74.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 62/224 (27%), Positives = 102/224 (45%)
Query: 239 HTLAVTCVKWG--GDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL-STEYAL 295
H+ AV C+K G V+ TG +D + +W + I L GH ++S+ ++E +
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLV 74
Query: 296 RTGAFDHTGKQYSSPEEMKKAAL--ERYNKIKGNA-P--ERLVSGSDDFTMFLWEPAVSK 350
GA T K + E L R N + N P E SGS D + +W+ + K
Sbjct: 75 AAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWD--IRK 132
Query: 351 QPKTRM-TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIR 409
+ GH + VN + F+PDG+W+ S D +K+W+ T GK + F+ H G + +
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLD 192
Query: 410 FELIYCFRYPSNFYCVVDMSCCMSLYSWSADS-RLLLSGSKDST 452
F +P F S ++ W ++ L+ SG ++T
Sbjct: 193 F-------HPHEFLLATG-SADKTVKFWDLETFELIGSGGTETT 228
Score = 170 (64.9 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 45/168 (26%), Positives = 77/168 (45%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T+ GH +SV F P G ASGS DT +++WD+ + + GH V + ++ DG
Sbjct: 96 TLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDG 155
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ +VSG + ++ WD GK + H+ I + + P + S D
Sbjct: 156 RWIVSGGEDNVVKVWDLTAGKLL-HEFKSHEGKIQSLDFHPHEF-----LLATGSADKTV 209
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKV--WE 267
+ WD+ + + T V C+ + DG + G Q+ ++K+ WE
Sbjct: 210 KFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCGLQE-SLKIFSWE 256
Score = 164 (62.8 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 52/213 (24%), Positives = 90/213 (42%)
Query: 302 HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKT-RMTGHQ 360
+T + Y E + +A KI + LV+G +D + LW A+ K + GH
Sbjct: 2 NTKRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLW--AIGKPNAILSLYGHS 59
Query: 361 QLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF----ELIYCF 416
++ V F VA+ + +IKLW+ K V GH + F E
Sbjct: 60 SGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASG 119
Query: 417 RYPSNFYCV-VDMSCCMSLYS----------WSADSRLLLSGSKDSTLKVWDIRTQKLKQ 465
+N + C+ Y ++ D R ++SG +D+ +KVWD+ KL
Sbjct: 120 SLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLH 179
Query: 466 DLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+ H ++ ++D+ P +A+G D+ +K W
Sbjct: 180 EFKSHEGKIQSLDFHPHEFLLATGSADKTVKFW 212
Score = 162 (62.1 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 43/173 (24%), Positives = 81/173 (46%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
++ GH+ + SV F +A+G+ T++LWDL + TGH++ + + + G
Sbjct: 54 SLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFG 113
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
+ SGS L+ WD + K + GH + + + + P R VS +D
Sbjct: 114 EFFASGSLDTNLKIWDIRK-KGCIHTYKGHTRGVNVLRFTP-----DGRWIVSGGEDNVV 167
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGG-DGVIYTGSQDCTIKVWETTQGKLI 274
++WD++ K + H + + + + ++ TGS D T+K W+ +LI
Sbjct: 168 KVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELI 220
Score = 139 (54.0 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 53/188 (28%), Positives = 88/188 (46%)
Query: 327 NAPERLVS-GSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIK 385
+A E LV+ G+ T+ LW+ +K +T +TGH+ V F P G++ AS S D ++K
Sbjct: 68 DASEGLVAAGAASGTIKLWDLEEAKVVRT-LTGHRSNCVSVNFHPFGEFFASGSLDTNLK 126
Query: 386 LWNGTTGKFVAVFRGHVGPVYQIRFE---LIYCFRYPSNFYCVVDMSCCMSLYSW----- 437
+W+ + ++GH V +RF N V D++ L+ +
Sbjct: 127 IWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEG 186
Query: 438 ---SADSR----LLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGG 490
S D LL +GS D T+K WD+ T +L V + ++PDG+ V G
Sbjct: 187 KIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCGL 246
Query: 491 KDRVLKLW 498
++ LK++
Sbjct: 247 QES-LKIF 253
>RGD|1307480 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0031965 "nuclear membrane"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307480 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH474015 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD
CTD:10885 OrthoDB:EOG412M4S IPI:IPI00201140 RefSeq:NP_001101175.1
UniGene:Rn.12973 Ensembl:ENSRNOT00000026726 GeneID:310720
KEGG:rno:310720 NextBio:662507 Uniprot:D4A106
Length = 942
Score = 172 (65.6 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 58/194 (29%), Positives = 90/194 (46%)
Query: 109 EAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSG 168
E VL V +SPD R LA D TV+++ ++T GHK V+C+ S DG + +G
Sbjct: 549 EDVLYVCYSPDQRLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISHDGALIATG 608
Query: 169 SKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV-HLNAPCRRFVSASKDGDARIWDV 227
S ++ W G L H + + + P HL F +A KD + WD
Sbjct: 609 SADRNVKIWGLDFGD-CHRSLFAHDDSVMHLRFVPKSHL------FFTAGKDHKIKQWDA 661
Query: 228 SLRKCVICLSGHTLAVTC--VKWGGDGVIYTGSQDCTIKVWETTQGKLI----RELKGHG 281
+ + L GH + C V GD V+ + S D ++++WE T+ LI REL+
Sbjct: 662 DKFEHIQTLEGHHQEIWCLAVSPSGDYVV-SASHDKSLRLWERTREPLILEEERELQREA 720
Query: 282 HWVNSLALSTEYAL 295
+ S+A + A+
Sbjct: 721 EYEESVAKEEQPAV 734
Score = 169 (64.5 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 54/173 (31%), Positives = 79/173 (45%)
Query: 132 VRLWDLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGN-PLS 190
V +WDL + G K V C+ S DG HL G + G ++ + +G+ GN +
Sbjct: 47 VFIWDLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGAIRVFSLLSGE--GNITFN 104
Query: 191 GHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG 250
GH+ +T + ++ L R S SKD D IWDV + L GH AVT +
Sbjct: 105 GHRAAVTSLKYD--QLGG---RLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLR 159
Query: 251 D-GVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL-STEYALRTGAFD 301
+ ++ T +D +K W+ + + GH V L L S E L TGA D
Sbjct: 160 ERNLLVTSGKDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEETRLITGAAD 212
Score = 153 (58.9 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 72/312 (23%), Positives = 127/312 (40%)
Query: 95 RPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC--TGHKNW 152
+PV TI GH V +++FS D + S + ++ V++W+ +T +C T +
Sbjct: 401 QPVRTSRITIGGHRSDVRTLSFSSDNIAVLSAAAES-VKIWNRST----LQCIRTMPCEY 455
Query: 153 VLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRR 212
LC + + +V G+K G +Q +D +G ++ H + +S P
Sbjct: 456 ALCSFFVPGDRQVVIGTKTGNMQLYDLASGNLL-ETIAAHDGALWSMSLSPDQRGFVTGG 514
Query: 213 FVSASKDGDAR-IWD-------VSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIK 264
A K D + D +S+++ I + C ++ DCT+K
Sbjct: 515 ADKAVKFWDFELVTDKNSTQKRLSVKQTRILQLDEDVLYVCYS-PDQRLLAVSLLDCTVK 573
Query: 265 VWETTQGKLIRELKGHGHWVNSLALSTEYAL-RTGAFDHT----GKQYSSPEEMKKAALE 319
++ K L GH V + +S + AL TG+ D G + A +
Sbjct: 574 IFYVDTLKFFLSLYGHKLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDD 633
Query: 320 RYNKIKGNAPERLV-SGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASA 378
++ L + D + W+ + +T + GH Q + + SP G +V SA
Sbjct: 634 SVMHLRFVPKSHLFFTAGKDHKIKQWDADKFEHIQT-LEGHHQEIWCLAVSPSGDYVVSA 692
Query: 379 SFDKSIKLWNGT 390
S DKS++LW T
Sbjct: 693 SHDKSLRLWERT 704
Score = 139 (54.0 bits), Expect = 6.8e-13, Sum P(3) = 6.8e-13
Identities = 35/126 (27%), Positives = 63/126 (50%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T GH AV S+ + G +LASGS DT V +WD+ ++ +++ GHK+ V + +
Sbjct: 102 TFNGHRAAVTSLKYDQLGGRLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRER 161
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
LV+ K ++ WD + + GH+ + G+ L + R ++ + D +
Sbjct: 162 NLLVTSGKDTMVKWWDLDN-QHCFKTMVGHRTEVWGLV-----LVSEETRLITGAADSEL 215
Query: 223 RIWDVS 228
R WD++
Sbjct: 216 RAWDIA 221
Score = 132 (51.5 bits), Expect = 4.0e-12, Sum P(3) = 4.0e-12
Identities = 45/166 (27%), Positives = 72/166 (43%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ G + V + SPDG LA G D +R++ L + GH+ V + + G
Sbjct: 61 LQGLKQEVTCLCPSPDGLHLAVGYEDGAIRVFSLLSGEGNITFNGHRAAVTSLKYDQLGG 120
Query: 164 HLVSGSKAGELQCWDPQTGKPSG-NPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
L SGSK ++ WD SG L GHK +T + + L V++ KD
Sbjct: 121 RLASGSKDTDVIIWD--VINESGLYRLKGHKDAVT----QALFLRER-NLLVTSGKDTMV 173
Query: 223 RIWDVSLRKCVICLSGHTLAVT-CVKWGGDGVIYTGSQDCTIKVWE 267
+ WD+ + C + GH V V + + TG+ D ++ W+
Sbjct: 174 KWWDLDNQHCFKTMVGHRTEVWGLVLVSEETRLITGAADSELRAWD 219
Score = 120 (47.3 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 46/161 (28%), Positives = 72/161 (44%)
Query: 353 KTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVY--QIRF 410
+TR+ + V +V +SPD + +A + D ++K++ T KF GH PV I
Sbjct: 541 QTRILQLDEDVLYVCYSPDQRLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISH 600
Query: 411 E--LIYCFRYPSNFYCV-VDMSCC-MSLYS---------WSADSRLLLSGSKDSTLKVWD 457
+ LI N +D C SL++ + S L + KD +K WD
Sbjct: 601 DGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMHLRFVPKSHLFFTAGKDHKIKQWD 660
Query: 458 IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+ Q L GH E++ + SP G+ V S D+ L+LW
Sbjct: 661 ADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLW 701
Score = 100 (40.3 bits), Expect = 3.4e-16, Sum P(3) = 3.4e-16
Identities = 20/80 (25%), Positives = 41/80 (51%)
Query: 420 SNFYCVVDMSCCMSLYSWSADS-RLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 478
S C+ M C +L S+ R ++ G+K ++++D+ + L + + H ++++
Sbjct: 443 STLQCIRTMPCEYALCSFFVPGDRQVVIGTKTGNMQLYDLASGNLLETIAAHDGALWSMS 502
Query: 479 WSPDGEKVASGGKDRVLKLW 498
SPD +GG D+ +K W
Sbjct: 503 LSPDQRGFVTGGADKAVKFW 522
Score = 77 (32.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 45/185 (24%), Positives = 74/185 (40%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKVWETTQ 270
R+V+ IWD+ + ++ L G VTC+ DG+ + G +D I+V+
Sbjct: 37 RYVAVPACEHVFIWDLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGAIRVFSLLS 96
Query: 271 GKLIRELKGHGHWVNSLALSTEYA-LRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNA- 328
G+ GH V SL L +G+ D + E L+ + A
Sbjct: 97 GEGNITFNGHRAAVTSLKYDQLGGRLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQAL 156
Query: 329 --PER--LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLV-NHVYFSPDGQWVASASFDKS 383
ER LV+ D TM W ++ M GH+ V V S + + + A+ D
Sbjct: 157 FLRERNLLVTSGKD-TMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEETRLITGAA-DSE 214
Query: 384 IKLWN 388
++ W+
Sbjct: 215 LRAWD 219
Score = 64 (27.6 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDL 137
C T+ GH V + + +L +G+ D+ +R WD+
Sbjct: 183 CFKTMVGHRTEVWGLVLVSEETRLITGAADSELRAWDI 220
Score = 60 (26.2 bits), Expect = 3.4e-16, Sum P(3) = 3.4e-16
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 354 TRMT--GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
+R+T GH+ V + FS D V SA+ + S+K+WN +T
Sbjct: 406 SRITIGGHRSDVRTLSFSSDNIAVLSAAAE-SVKIWNRST 444
Score = 49 (22.3 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 27/120 (22%), Positives = 48/120 (40%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF-ELIYCF 416
GH+ V + S DG +A+ S D+++K+W G H V +RF + F
Sbjct: 588 GHKLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMHLRFVPKSHLF 647
Query: 417 RYPSNFYCVVDMSC-----CMSLYS-----W----SADSRLLLSGSKDSTLKVWDIRTQK 462
+ + +L W S ++S S D +L++W+ RT++
Sbjct: 648 FTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLWE-RTRE 706
Score = 48 (22.0 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 458 IRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+RT ++ + GH +V + +S D V S + V K+W
Sbjct: 403 VRTSRIT--IGGHRSDVRTLSFSSDNIAVLSAAAESV-KIW 440
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 233 (87.1 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 77/312 (24%), Positives = 140/312 (44%)
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
+R VN + I G + FSP+ + L + S +LW + T + GH V
Sbjct: 203 LRNVNNFCSQI-GDDRPISYCQFSPNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNV 261
Query: 154 LCIAWSADGK--------HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVH 205
I++ ++ S + G ++ W + +P + + GH + ++W H
Sbjct: 262 GAISFHPQATLTLEESDVNMASCAADGSVKLWSLDSDEPIAD-IEGHSMRVARVTW---H 317
Query: 206 LNAPCRRFVSAS-KDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTI 263
P RF+ + D R+WD+ +++ ++ GH+ V + + DG + TG D
Sbjct: 318 ---PSGRFLGTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFA 374
Query: 264 KVWETTQGKLIRELKGHGHWVNSLALSTE-YALRTGAFDHTGKQYSSPEEMKKAALERYN 322
+VW+ G+ + L+GH + S+ S + + TG+ D+ K + + + +
Sbjct: 375 RVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPAHQ 434
Query: 323 ------KIKGNAPERLVSGSDDFTMFLW-EPAVSKQPKTRMTGHQQLVNHVYFSPDGQWV 375
K + N L++G+ D T +W P S P + GH+ V V SPDGQ +
Sbjct: 435 NLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPGWS--PLKTLAGHEGKVMGVDLSPDGQLI 492
Query: 376 ASASFDKSIKLW 387
A+ S+D++ KLW
Sbjct: 493 ATCSYDRTFKLW 504
Score = 217 (81.4 bits), Expect = 9.7e-15, P = 9.7e-15
Identities = 64/211 (30%), Positives = 97/211 (45%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
A I GH+ V V + P GR L + D + RLWDL Q + GH V + + D
Sbjct: 302 ADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPD 361
Query: 162 GKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGD 221
G +G + WD +TG+ L GH K I I++ P + + S D
Sbjct: 362 GSLAGTGGLDSFARVWDLRTGR-CVMFLEGHIKEIYSINFSPNGFHV-----ATGSGDNA 415
Query: 222 ARIWDVSLRKCVICLSGHTLAVTCVKWG-GDG-VIYTGSQDCTIKVWETTQGKLIRELKG 279
++WD+ R+C+ + H V+ VK+ DG + TG+ D T K+W ++ L G
Sbjct: 416 CKVWDLRQRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPGWSPLKTLAG 475
Query: 280 HGHWVNSLALSTEYAL-RTGAFDHTGKQYSS 309
H V + LS + L T ++D T K + S
Sbjct: 476 HEGKVMGVDLSPDGQLIATCSYDRTFKLWMS 506
Score = 187 (70.9 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 51/178 (28%), Positives = 80/178 (44%)
Query: 338 DFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAV 397
D + LW+ V ++ GH + V+ ++F PDG + D ++W+ TG+ V
Sbjct: 329 DHSWRLWDLEVQEEI-LHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMF 387
Query: 398 FRGHVGPVYQIRFEL--IYCFRYPSNFYCVV-DMSCCMSLYSWSA-------------DS 441
GH+ +Y I F + + C V D+ +Y+ A D
Sbjct: 388 LEGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVKFQPNDG 447
Query: 442 RLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLWM 499
LL+G+ D+T K+W + L GH +V VD SPDG+ +A+ DR KLWM
Sbjct: 448 HYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGVDLSPDGQLIATCSYDRTFKLWM 505
Score = 178 (67.7 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 63/261 (24%), Positives = 114/261 (43%)
Query: 253 VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLA------LSTEYA---LRTGAFDHT 303
++ T S K+W+ LIR L+GH V +++ L+ E + + + A D +
Sbjct: 230 LLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQATLTLEESDVNMASCAADGS 289
Query: 304 GKQYSSPEEMKKAALE----RYNKIKGNAPERLVSGSD-DFTMFLWEPAVSKQPKTRMTG 358
K +S + A +E R ++ + R + + D + LW+ V ++ G
Sbjct: 290 VKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEI-LHQEG 348
Query: 359 HQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRY 418
H + V+ ++F PDG + D ++W+ TG+ V GH+ +Y I F
Sbjct: 349 HSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIYSINFS------- 401
Query: 419 PSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVD 478
P+ F+ + +GS D+ KVWD+R ++ +P H + V +V
Sbjct: 402 PNGFH--------------------VATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVK 441
Query: 479 WSP-DGEKVASGGKDRVLKLW 498
+ P DG + +G D K+W
Sbjct: 442 FQPNDGHYLLTGAYDNTAKIW 462
Score = 157 (60.3 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 36/122 (29%), Positives = 62/122 (50%)
Query: 91 VFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHK 150
V+ +R RC + GH + + S+ FSP+G +A+GSGD ++WDL + ++ H+
Sbjct: 376 VWDLR-TGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPAHQ 434
Query: 151 NWVLCIAWSA-DGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV-HLNA 208
N V + + DG +L++G+ + W P L+GH+ + G+ P L A
Sbjct: 435 NLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPGWSPL-KTLAGHEGKVMGVDLSPDGQLIA 493
Query: 209 PC 210
C
Sbjct: 494 TC 495
>UNIPROTKB|B4HWV6 [details] [associations]
symbol:GM11446 "Ribosome biogenesis protein WDR12 homolog"
species:7238 "Drosophila sechellia" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 EMBL:CH480818 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002036578.1
ProteinModelPortal:B4HWV6 EnsemblMetazoa:FBtr0194431 GeneID:6612061
KEGG:dse:Dsec_GM11446 FlyBase:FBgn0166389 Uniprot:B4HWV6
Length = 420
Score = 157 (60.3 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 62/232 (26%), Positives = 103/232 (44%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLW--DLN--------------TQTPM 143
C + GH V SV+ SPDG + A+GS DT +++W +L+ +TP
Sbjct: 186 CVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVWSAELDDGVEGSSKRMKESGVRTPK 245
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
GH+ V + W D L++GS L+ WD + +S +K I S+
Sbjct: 246 ITLQGHRESVSAVQWM-DATTLLTGSWDYTLKVWDLSL-EGIKTEISTNKS-IFDASYSK 302
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLS---GHTLAVTCVKWGG--DGVIYTGS 258
LN R ++AS D + R++D + + + GH V V W + + +G+
Sbjct: 303 --LN---RLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGA 357
Query: 259 QDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSS 309
D K+W+ K + +L GHG V + S + +G D+T + + S
Sbjct: 358 YDNQNKLWDCRSPKAPLYDLLGHGDKVLDIDWSNPKYIVSGGVDNTVRVFKS 409
Score = 135 (52.6 bits), Expect = 1.9e-16, Sum P(3) = 1.9e-16
Identities = 64/256 (25%), Positives = 103/256 (40%)
Query: 37 QLSQIVNKLLNNEE---KLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFR 93
+L+ VN LL ++ + F + D L L +L + +S E + I Y + F
Sbjct: 38 ELNTFVNALLRQKDGSSDTDFDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVER--FP 95
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
C H + V +V G+ + SG D ++ LW N + +GH +
Sbjct: 96 APEPQDCLL----HDDWVSAV--KARGKWILSGCYDNSLNLWT-NKGKHILTISGHTAPI 148
Query: 154 LCIAW-SADGK--HLVSGSKAGELQCWDPQTGKPSGNPLS---GHKKWITGISWEPVHLN 207
+ W S D + VS S+ W G + + +S GH++ + +S P L
Sbjct: 149 KAVDWISLDEETGRFVSTSQDQTAMLWKWNVGSNAVDCVSVCKGHERGVDSVSVSPDGL- 207
Query: 208 APCRRFVSASKDGDARIWDVSL----------------RKCVICLSGHTLAVTCVKWGGD 251
RF + S D ++W L R I L GH +V+ V+W
Sbjct: 208 ----RFATGSWDTMLKVWSAELDDGVEGSSKRMKESGVRTPKITLQGHRESVSAVQWMDA 263
Query: 252 GVIYTGSQDCTIKVWE 267
+ TGS D T+KVW+
Sbjct: 264 TTLLTGSWDYTLKVWD 279
Score = 128 (50.1 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 57/230 (24%), Positives = 98/230 (42%)
Query: 274 IRELKGHGHWVNSLALSTEYALRTGAFDH--TGKQYSSPEEMKKAALERYNKIKGNAPER 331
+ +K G W+ S L T H T +++P +K ++ G R
Sbjct: 109 VSAVKARGKWILSGCYDNSLNLWTNKGKHILTISGHTAP--IKAVDWISLDEETG----R 162
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMT---GHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
VS S D T LW+ V ++ GH++ V+ V SPDG A+ S+D +K+W+
Sbjct: 163 FVSTSQDQTAMLWKWNVGSNAVDCVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVWS 222
Query: 389 GTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGS 448
G G +++ + R P + +S W D+ LL+GS
Sbjct: 223 AELDD------GVEGSSKRMKESGV---RTPK--ITLQGHRESVSAVQWM-DATTLLTGS 270
Query: 449 KDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
D TLKVWD+ + +K ++ + +F +S + + D+ L+L+
Sbjct: 271 WDYTLKVWDLSLEGIKTEISTNKS-IFDASYSKLNRLILTASADKNLRLY 319
Score = 125 (49.1 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 56/211 (26%), Positives = 89/211 (42%)
Query: 103 TIAGHT---EAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT----GHKNWVLC 155
TI+GHT +AV ++ + + S S D T LW N + C GH+ V
Sbjct: 140 TISGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWKWNVGSNAVDCVSVCKGHERGVDS 199
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
++ S DG +GS L+ W + G S + +G+ + L R VS
Sbjct: 200 VSVSPDGLRFATGSWDTMLKVWSAELD--DGVEGSSKRMKESGVRTPKITLQGH-RESVS 256
Query: 216 ASKDGDARI-----WDVSLRKCVICLSGHTLAVTCVKWGGDG-------VIYTGSQDCTI 263
A + DA WD +L+ + L G ++ K D +I T S D +
Sbjct: 257 AVQWMDATTLLTGSWDYTLKVWDLSLEGIKTEISTNKSIFDASYSKLNRLILTASADKNL 316
Query: 264 KVWE--TTQGKLIRELK-GHGHWVNSLALST 291
++++ T QG ++R GH WV ++ ST
Sbjct: 317 RLYDPRTNQGSVVRNTYLGHNAWVQTVMWST 347
Score = 113 (44.8 bits), Expect = 1.9e-16, Sum P(3) = 1.9e-16
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 437 WSADSRLL-LSGSKDSTLKVWDIRTQKLK-QDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
WS L +SG+ D+ K+WD R+ K DL GH D+V +DWS + + + SGG D
Sbjct: 345 WSTTEEFLFVSGAYDNQNKLWDCRSPKAPLYDLLGHGDKVLDIDWS-NPKYIVSGGVDNT 403
Query: 495 LKLW 498
++++
Sbjct: 404 VRVF 407
Score = 105 (42.0 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 50/207 (24%), Positives = 92/207 (44%)
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG- 250
H W++ + A + +S D +W + K ++ +SGHT + V W
Sbjct: 105 HDDWVSAVK-------ARGKWILSGCYDNSLNLW-TNKGKHILTISGHTAPIKAVDWISL 156
Query: 251 D---GVIYTGSQDCTIKVWETTQGK----LIRELKGHGHWVNSLALSTEYALR--TGAFD 301
D G + SQD T +W+ G + KGH V+S+++S + LR TG++D
Sbjct: 157 DEETGRFVSTSQDQTAMLWKWNVGSNAVDCVSVCKGHERGVDSVSVSPD-GLRFATGSWD 215
Query: 302 HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
K +S A L+ + ++G++ SG + PK + GH++
Sbjct: 216 TMLKVWS-------AELD--DGVEGSSKRMKESGV-------------RTPKITLQGHRE 253
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWN 388
V+ V + D + + S+D ++K+W+
Sbjct: 254 SVSAVQWM-DATTLLTGSWDYTLKVWD 279
Score = 82 (33.9 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQK---LKQDLPGHADEVFAVDWSPDGEKV-ASGGK 491
S+S +RL+L+ S D L+++D RT + ++ GH V V WS E + SG
Sbjct: 299 SYSKLNRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAY 358
Query: 492 DRVLKLW 498
D KLW
Sbjct: 359 DNQNKLW 365
Score = 72 (30.4 bits), Expect = 1.9e-16, Sum P(3) = 1.9e-16
Identities = 24/95 (25%), Positives = 51/95 (53%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L++GS D+T+ +W+ ++ + KT ++ ++ + + Y S + + +AS DK+++L++ T
Sbjct: 266 LLTGSWDYTLKVWDLSL-EGIKTEISTNKSIFDASY-SKLNRLILTASADKNLRLYDPRT 323
Query: 392 --GKFVA-VFRGHVGPVYQIRFELIYCFRYPSNFY 423
G V + GH V + + F + S Y
Sbjct: 324 NQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAY 358
Score = 42 (19.8 bits), Expect = 3.0e-09, Sum P(3) = 3.0e-09
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQD 466
WS + + ++SG D+T++V+ R + L +D
Sbjct: 389 WS-NPKYIVSGGVDNTVRVFKSR-KALAED 416
>UNIPROTKB|Q0VC24 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9913 "Bos taurus" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS] [GO:0008283
"cell proliferation" evidence=ISS] [GO:0000466 "maturation of 5.8S
rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0007219 "Notch signaling
pathway" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 EMBL:BT029892 EMBL:BC120386 EMBL:BC142121
IPI:IPI00725024 RefSeq:NP_001069375.1 UniGene:Bt.42368
ProteinModelPortal:Q0VC24 STRING:Q0VC24 Ensembl:ENSBTAT00000020499
GeneID:528209 KEGG:bta:528209 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 InParanoid:Q0VC24
OrthoDB:EOG4V6ZGM NextBio:20874770 Uniprot:Q0VC24
Length = 423
Score = 230 (86.0 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 52/161 (32%), Positives = 85/161 (52%)
Query: 103 TIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADG 162
T++GH EA+ SV +S D ++ S S D T+++WD+ + + TG+K + CI++S
Sbjct: 252 TLSGHKEAISSVLWS-DAEEICSASWDHTIKVWDVESGSLKSTLTGNKVFN-CISYSPLC 309
Query: 163 KHLVSGSKAGELQCWDPQT--GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
K L SGS ++ WDP+T G L+ H W+T + W P H ++ +S S D
Sbjct: 310 KRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHE----QQLISGSLDN 365
Query: 221 DARIWDV-SLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQD 260
++WD S + + L+ H V V W G++ +G D
Sbjct: 366 MVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDSGLLLSGGAD 406
Score = 177 (67.4 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 64/234 (27%), Positives = 111/234 (47%)
Query: 280 HGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPER-------L 332
H W++++ + E+ L TG++D T + +S + + + +K A + L
Sbjct: 100 HDDWISAIEGTEEWIL-TGSYDKTSRIWSLEGKSIMTIVGHTDVVKDVAWVKKDSLSCLL 158
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRM---TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
+S S D T+ LWE V + + GH V+ + G S S+DK +K+W+
Sbjct: 159 LSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDSTGTKFCSGSWDKMLKIWST 218
Query: 390 T-TGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSC---CMSLYSWSADSRLLL 445
T + + P + + E + R P +V +S +S WS D+ +
Sbjct: 219 VPTDEEDEMEESTNRPRKKQKTEQLGLTRTP-----IVTLSGHKEAISSVLWS-DAEEIC 272
Query: 446 SGSKDSTLKVWDIRTQKLKQDLPGHADEVF-AVDWSPDGEKVASGGKDRVLKLW 498
S S D T+KVWD+ + LK L G+ +VF + +SP +++ASG DR ++LW
Sbjct: 273 SASWDHTIKVWDVESGSLKSTLTGN--KVFNCISYSPLCKRLASGSTDRHIRLW 324
Score = 175 (66.7 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 54/176 (30%), Positives = 87/176 (49%)
Query: 139 TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG 198
T+TP+ +GHK + + WS D + + S S ++ WD ++G L+G+K +
Sbjct: 246 TRTPIVTLSGHKEAISSVLWS-DAEEICSASWDHTIKVWDVESGSLKST-LTGNKVF-NC 302
Query: 199 ISWEPVHLNAPCRRFVSASKDGDARIWDVSLRK-CVICLS--GHTLAVTCVKWGG--DGV 253
IS+ P+ C+R S S D R+WD + ++ LS HT VT VKW +
Sbjct: 303 ISYSPL-----CKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQ 357
Query: 254 IYTGSQDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYS 308
+ +GS D +K+W+T K + +L H V S+ + L +G D+ K YS
Sbjct: 358 LISGSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDSGLLLSGGADN--KLYS 411
Score = 143 (55.4 bits), Expect = 4.6e-14, Sum P(2) = 4.6e-14
Identities = 63/274 (22%), Positives = 120/274 (43%)
Query: 145 KCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV 204
+C H +W+ I + + +++GS + W + GK S + GH + ++W V
Sbjct: 96 QCMFHDDWISAIEGTEEW--ILTGSYDKTSRIWSLE-GK-SIMTIVGHTDVVKDVAW--V 149
Query: 205 HLNAPCRRFVSASKDGDARIWDVSLR----KCVICLSGHTLAVTCVKWGGDGVIY-TGSQ 259
++ +SAS D +W+ ++ K + C GH +V + G + +GS
Sbjct: 150 KKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDSTGTKFCSGSW 209
Query: 260 DCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALE 319
D +K+W T E++ ST + + G +P E
Sbjct: 210 DKMLKIWSTVPTDEEDEMEE----------STNRPRKKQKTEQLGLT-RTPIVTLSGHKE 258
Query: 320 RYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASAS 379
+ + + E + S S D T+ +W+ S K+ +TG++ + N + +SP + +AS S
Sbjct: 259 AISSVLWSDAEEICSASWDHTIKVWD-VESGSLKSTLTGNK-VFNCISYSPLCKRLASGS 316
Query: 380 FDKSIKLWNGTT--GKFVAV-FRGHVGPVYQIRF 410
D+ I+LW+ T G V++ H G V +++
Sbjct: 317 TDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Score = 137 (53.3 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMF---KCTGHKNWVLCIAW 158
+T+ G+ + +++SP ++LASGS D +RLWD T+ T H WV + W
Sbjct: 292 STLTGN-KVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW 350
Query: 159 S-ADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISW 201
S + L+SGS ++ WD ++ K L+ H+ + + W
Sbjct: 351 SPTHEQQLISGSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDW 394
Score = 114 (45.2 bits), Expect = 4.6e-14, Sum P(2) = 4.6e-14
Identities = 26/61 (42%), Positives = 36/61 (59%)
Query: 437 WS-ADSRLLLSGSKDSTLKVWDIRTQKLK-QDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
WS + L+SGS D+ +K+WD R+ K DL H D+V +VDW+ G + SGG D
Sbjct: 350 WSPTHEQQLISGSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDSG-LLLSGGADNK 408
Query: 495 L 495
L
Sbjct: 409 L 409
Score = 108 (43.1 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 51/210 (24%), Positives = 91/210 (43%)
Query: 26 PMYFPQNAGPQQLSQIVNKLLN--NE--EKLPYAFYISDHELLVPLGSYLEKHKVSVEKV 81
P P + LS ++NKLL NE + + + F I L +PL ++E +S E+V
Sbjct: 21 PFSIPAASEIADLSNLINKLLEAKNEFHKHVEFDFLIKGQFLRMPLFKHMELENISSEEV 80
Query: 82 LSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
+ + Y + + +C H + + ++ + + + +GS D T R+W L ++
Sbjct: 81 VELEYVEK--YTAPQPEQCMF----HDDWISAIEGTEEW--ILTGSYDKTSRIWSLEGKS 132
Query: 142 PMFKCTGHKNWVLCIAW-SADGKH--LVSGSKAGELQCWDPQTGKPSGNPLS---GHKKW 195
M GH + V +AW D L+S S + W+ + L GH
Sbjct: 133 IM-TIVGHTDVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGH--- 188
Query: 196 ITGISWEPVHLNAPCRRFVSASKDGDARIW 225
G S + + +++ +F S S D +IW
Sbjct: 189 -AG-SVDSIAVDSTGTKFCSGSWDKMLKIW 216
Score = 108 (43.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 41/163 (25%), Positives = 74/163 (45%)
Query: 230 RKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLAL 289
R ++ LSGH A++ V W I + S D TIKVW+ G L L G+ + N ++
Sbjct: 247 RTPIVTLSGHKEAISSVLWSDAEEICSASWDHTIKVWDVESGSLKSTLTGNKVF-NCISY 305
Query: 290 STEYA-LRTGAFDHTGKQY---SSPEEMKKAALERYN----KIKGNAP--ERLVSGSDDF 339
S L +G+ D + + + + +L + +K + ++L+SGS D
Sbjct: 306 SPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDN 365
Query: 340 TMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
+ LW+ K P + H+ V V ++ G ++ + +K
Sbjct: 366 MVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDSGLLLSGGADNK 408
Score = 106 (42.4 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 36/120 (30%), Positives = 55/120 (45%)
Query: 277 LKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKG---NAP--ER 331
L GH ++S+ S + + ++DHT K + K+ L NK+ +P +R
Sbjct: 253 LSGHKEAISSVLWSDAEEICSASWDHTIKVWDVESGSLKSTLTG-NKVFNCISYSPLCKR 311
Query: 332 LVSGSDDFTMFLWEPAVSKQP--KTRMTGHQQLVNHVYFSPDG-QWVASASFDKSIKLWN 388
L SGS D + LW+P +T H V V +SP Q + S S D +KLW+
Sbjct: 312 LASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSLDNMVKLWD 371
Score = 103 (41.3 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQK---LKQDLPGHADEVFAVDWSPDGEK-VASGGK 491
S+S + L SGS D +++WD RT+ + L H V +V WSP E+ + SG
Sbjct: 304 SYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPTHEQQLISGSL 363
Query: 492 DRVLKLW 498
D ++KLW
Sbjct: 364 DNMVKLW 370
>TAIR|locus:2057381 [details] [associations]
symbol:emb1345 "AT2G26060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC004747 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:AY093154
EMBL:AY085277 EMBL:BT003394 IPI:IPI00536484 PIR:T02617
RefSeq:NP_565615.1 UniGene:At.38940 ProteinModelPortal:O80990
SMR:O80990 PaxDb:O80990 PRIDE:O80990 EnsemblPlants:AT2G26060.1
GeneID:817147 KEGG:ath:AT2G26060 TAIR:At2g26060 InParanoid:O80990
PhylomeDB:O80990 ProtClustDB:CLSN2917143 ArrayExpress:O80990
Genevestigator:O80990 Uniprot:O80990
Length = 352
Score = 197 (74.4 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 83/303 (27%), Positives = 138/303 (45%)
Query: 107 HTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT----GHKNWVLCIAWSADG 162
HT V S A+SP G+ LA+ S D T +W N + F+C GH+N V ++W+A G
Sbjct: 73 HTRTVRSCAWSPSGQLLATASFDGTTGIWK-NYGSE-FECISTLEGHENEVKSVSWNASG 130
Query: 163 KHLVSGSKAGELQCWDPQTGKP--SGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDG 220
L + S+ + W+ G L+GH + + + W P ++ S S D
Sbjct: 131 SCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPT-MDV----LFSCSYDN 185
Query: 221 DARIW----DVSLRKCVICL----SGHTLAVTCVKWG--GDGVIYTGSQDCTIKVWETTQ 270
++W D +CV L +GH+ V + + GD ++ T S D T+K+W T
Sbjct: 186 TIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMV-TCSDDLTLKIWGTDI 244
Query: 271 GKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPE 330
K+ + + + W++ LS Y RT H +S + + A + ++ ++
Sbjct: 245 AKM-QSGEEYAPWIHLCTLSG-YHDRTIYSAH----WSRDDIIASGAGDNAIRLFVDSKH 298
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSP-DG-QWVASASFDKSIKLWN 388
V G + + L K+ K H+ VN V +SP +G + +ASAS D +K+W
Sbjct: 299 DSVDGPS-YNLLL------KKNKA----HENDVNSVQWSPGEGNRLLASASDDGMVKIWQ 347
Query: 389 GTT 391
T
Sbjct: 348 LAT 350
Score = 191 (72.3 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 58/180 (32%), Positives = 86/180 (47%)
Query: 104 IAGHTEAVLSVAFSP-----DGRQ--LASGSGDTTVRLWDLNTQTPMFKCTG-----HKN 151
+ GHT+ V SVA++P DG LAS SGD TVR+W+ ++ + + C H
Sbjct: 16 LEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTR 75
Query: 152 WVLCIAWSADGKHLVSGSKAGELQCWDPQTGK-PSGNPLSGHKKWITGISWEPVHLNAPC 210
V AWS G+ L + S G W + + L GH+ + +SW + + C
Sbjct: 76 TVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSW---NASGSC 132
Query: 211 RRFVSASKDGDARIWDV---SLRKCVICLSGHTLAVTCVKWGGD-GVIYTGSQDCTIKVW 266
+ S+D IW+V + C L+GHT V V+W V+++ S D TIKVW
Sbjct: 133 --LATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
Score = 111 (44.1 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 47/186 (25%), Positives = 79/186 (42%)
Query: 145 KCTGHKNWVLCIAWS-----ADGKHLVSGSKAGE--LQCWDPQTGKPSGNPLS----GHK 193
K GH + V +AW+ ADG + S +G+ ++ W+ + S + H
Sbjct: 15 KLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHT 74
Query: 194 KWITGISWEPVHLNAPCRRFVSASKDGDARIWDV--SLRKCVICLSGHTLAVTCVKWGGD 251
+ + +W P + +AS DG IW S +C+ L GH V V W
Sbjct: 75 RTVRSCAWSPSG-----QLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNAS 129
Query: 252 G-VIYTGSQDCTIKVWETTQGK---LIRELKGHGHWVNSLALS-TEYALRTGAFDHTGKQ 306
G + T S+D ++ +WE +G L GH V + T L + ++D+T K
Sbjct: 130 GSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKV 189
Query: 307 YSSPEE 312
+ S ++
Sbjct: 190 WWSEDD 195
Score = 111 (44.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 65/262 (24%), Positives = 106/262 (40%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKC----TGHKNWVLC 155
C +T+ GH V SV+++ G LA+ S D +V +W++ + + C TGH V
Sbjct: 110 CISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEV-LEGNEYDCAAVLTGHTQDVKM 168
Query: 156 IAWSADGKHLVSGSKAGELQCW-------DPQTGKPSGNPLSGHKKWITGISWEPVHLNA 208
+ W L S S ++ W + Q + G +GH + IS+ NA
Sbjct: 169 VQWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISF-----NA 223
Query: 209 PCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWET 268
+ V+ S D +IW + K SG A W + +G D TI
Sbjct: 224 AGDKMVTCSDDLTLKIWGTDIAKMQ---SGEEYA----PWIHLCTL-SGYHDRTIYSAHW 275
Query: 269 TQGKLIRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIK--- 325
++ +I G G N++ L + + + D G Y+ + KA N ++
Sbjct: 276 SRDDIIAS--GAGD--NAIRLFVDS--KHDSVD--GPSYNLLLKKNKAHENDVNSVQWSP 327
Query: 326 GNAPERLVSGSDDFTMFLWEPA 347
G L S SDD + +W+ A
Sbjct: 328 GEGNRLLASASDDGMVKIWQLA 349
Score = 78 (32.5 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 37/146 (25%), Positives = 63/146 (43%)
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFR 417
GH V + F+ G + + S D ++K+W GT +A + G Y L
Sbjct: 211 GHSSTVWSISFNAAGDKMVTCSDDLTLKIW-GTD---IAKMQS--GEEYAPWIHLCTLSG 264
Query: 418 YPSNFYCVVDMSCCMSLYSWSADS--RLLLSGSKDSTL-KVWDIRTQKLKQDLPGHADEV 474
Y S + S + D+ RL + DS +++ +K K H ++V
Sbjct: 265 YHDRTIYSAHWSRDDIIASGAGDNAIRLFVDSKHDSVDGPSYNLLLKKNK----AHENDV 320
Query: 475 FAVDWSP-DGEKV-ASGGKDRVLKLW 498
+V WSP +G ++ AS D ++K+W
Sbjct: 321 NSVQWSPGEGNRLLASASDDGMVKIW 346
Score = 54 (24.1 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 437 WSAD--SRLLLSGSKDSTLKVWDIRTQ 461
WS +RLL S S D +K+W + T+
Sbjct: 325 WSPGEGNRLLASASDDGMVKIWQLATK 351
>UNIPROTKB|B4Q9T6 [details] [associations]
symbol:GD22226 "Ribosome biogenesis protein WDR12 homolog"
species:7240 "Drosophila simulans" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 EMBL:CM000361 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002079018.1
ProteinModelPortal:B4Q9T6 EnsemblMetazoa:FBtr0222136 GeneID:6731883
KEGG:dsi:Dsim_GD22226 FlyBase:FBgn0193635 Uniprot:B4Q9T6
Length = 420
Score = 153 (58.9 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 61/232 (26%), Positives = 103/232 (44%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLW--DLN--------------TQTPM 143
C + GH V SV+ SPDG + A+GS DT +++W +L+ +TP
Sbjct: 186 CVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVWSAELDDGVEGSSKRMKESGVRTPK 245
Query: 144 FKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEP 203
GH+ V + W D L++GS L+ WD + +S +K I S+
Sbjct: 246 ITLQGHRESVSAVQWM-DATTLLTGSWDYTLKVWDLSL-EGIKTEISTNKS-IFDASYSK 302
Query: 204 VHLNAPCRRFVSASKDGDARIWDVSLRKCVICLS---GHTLAVTCVKWGG--DGVIYTGS 258
LN R ++AS D + R++D + + + GH V V W + + +G+
Sbjct: 303 --LN---RLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGA 357
Query: 259 QDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSS 309
D K+W+ K + +L GHG V + S + +G D++ + + S
Sbjct: 358 YDNQNKLWDCRSPKAPLYDLLGHGDKVLDIDWSNPKYIVSGGVDNSVRVFKS 409
Score = 135 (52.6 bits), Expect = 3.0e-16, Sum P(3) = 3.0e-16
Identities = 64/256 (25%), Positives = 103/256 (40%)
Query: 37 QLSQIVNKLLNNEE---KLPYAFYISDHELLVPLGSYLEKHKVSVEKVLSIVYQPQAVFR 93
+L+ VN LL ++ + F + D L L +L + +S E + I Y + F
Sbjct: 38 ELNTFVNALLRQKDGSSDTEFDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVER--FP 95
Query: 94 IRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWV 153
C H + V +V G+ + SG D ++ LW N + +GH +
Sbjct: 96 APEPQDCLL----HDDWVSAV--KARGKWILSGCYDNSLNLWT-NKGKHILTISGHTAPI 148
Query: 154 LCIAW-SADGK--HLVSGSKAGELQCWDPQTGKPSGNPLS---GHKKWITGISWEPVHLN 207
+ W S D + VS S+ W G + + +S GH++ + +S P L
Sbjct: 149 KAVDWISLDEETGRFVSTSQDQTAMLWKWNVGSNAVDCVSVCKGHERGVDSVSVSPDGL- 207
Query: 208 APCRRFVSASKDGDARIWDVSL----------------RKCVICLSGHTLAVTCVKWGGD 251
RF + S D ++W L R I L GH +V+ V+W
Sbjct: 208 ----RFATGSWDTMLKVWSAELDDGVEGSSKRMKESGVRTPKITLQGHRESVSAVQWMDA 263
Query: 252 GVIYTGSQDCTIKVWE 267
+ TGS D T+KVW+
Sbjct: 264 TTLLTGSWDYTLKVWD 279
Score = 128 (50.1 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 57/230 (24%), Positives = 98/230 (42%)
Query: 274 IRELKGHGHWVNSLALSTEYALRTGAFDH--TGKQYSSPEEMKKAALERYNKIKGNAPER 331
+ +K G W+ S L T H T +++P +K ++ G R
Sbjct: 109 VSAVKARGKWILSGCYDNSLNLWTNKGKHILTISGHTAP--IKAVDWISLDEETG----R 162
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMT---GHQQLVNHVYFSPDGQWVASASFDKSIKLWN 388
VS S D T LW+ V ++ GH++ V+ V SPDG A+ S+D +K+W+
Sbjct: 163 FVSTSQDQTAMLWKWNVGSNAVDCVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVWS 222
Query: 389 GTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGS 448
G G +++ + R P + +S W D+ LL+GS
Sbjct: 223 AELDD------GVEGSSKRMKESGV---RTPK--ITLQGHRESVSAVQWM-DATTLLTGS 270
Query: 449 KDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
D TLKVWD+ + +K ++ + +F +S + + D+ L+L+
Sbjct: 271 WDYTLKVWDLSLEGIKTEISTNKS-IFDASYSKLNRLILTASADKNLRLY 319
Score = 125 (49.1 bits), Expect = 9.4e-12, Sum P(2) = 9.4e-12
Identities = 56/211 (26%), Positives = 89/211 (42%)
Query: 103 TIAGHT---EAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT----GHKNWVLC 155
TI+GHT +AV ++ + + S S D T LW N + C GH+ V
Sbjct: 140 TISGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWKWNVGSNAVDCVSVCKGHERGVDS 199
Query: 156 IAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVS 215
++ S DG +GS L+ W + G S + +G+ + L R VS
Sbjct: 200 VSVSPDGLRFATGSWDTMLKVWSAELD--DGVEGSSKRMKESGVRTPKITLQGH-RESVS 256
Query: 216 ASKDGDARI-----WDVSLRKCVICLSGHTLAVTCVKWGGDG-------VIYTGSQDCTI 263
A + DA WD +L+ + L G ++ K D +I T S D +
Sbjct: 257 AVQWMDATTLLTGSWDYTLKVWDLSLEGIKTEISTNKSIFDASYSKLNRLILTASADKNL 316
Query: 264 KVWE--TTQGKLIRELK-GHGHWVNSLALST 291
++++ T QG ++R GH WV ++ ST
Sbjct: 317 RLYDPRTNQGSVVRNTYLGHNAWVQTVMWST 347
Score = 111 (44.1 bits), Expect = 3.0e-16, Sum P(3) = 3.0e-16
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 437 WSADSRLL-LSGSKDSTLKVWDIRTQKLK-QDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
WS L +SG+ D+ K+WD R+ K DL GH D+V +DWS + + + SGG D
Sbjct: 345 WSTTEEFLFVSGAYDNQNKLWDCRSPKAPLYDLLGHGDKVLDIDWS-NPKYIVSGGVDNS 403
Query: 495 LKLW 498
++++
Sbjct: 404 VRVF 407
Score = 105 (42.0 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 50/207 (24%), Positives = 92/207 (44%)
Query: 192 HKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGG- 250
H W++ + A + +S D +W + K ++ +SGHT + V W
Sbjct: 105 HDDWVSAVK-------ARGKWILSGCYDNSLNLW-TNKGKHILTISGHTAPIKAVDWISL 156
Query: 251 D---GVIYTGSQDCTIKVWETTQGK----LIRELKGHGHWVNSLALSTEYALR--TGAFD 301
D G + SQD T +W+ G + KGH V+S+++S + LR TG++D
Sbjct: 157 DEETGRFVSTSQDQTAMLWKWNVGSNAVDCVSVCKGHERGVDSVSVSPD-GLRFATGSWD 215
Query: 302 HTGKQYSSPEEMKKAALERYNKIKGNAPERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQ 361
K +S A L+ + ++G++ SG + PK + GH++
Sbjct: 216 TMLKVWS-------AELD--DGVEGSSKRMKESGV-------------RTPKITLQGHRE 253
Query: 362 LVNHVYFSPDGQWVASASFDKSIKLWN 388
V+ V + D + + S+D ++K+W+
Sbjct: 254 SVSAVQWM-DATTLLTGSWDYTLKVWD 279
Score = 82 (33.9 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQK---LKQDLPGHADEVFAVDWSPDGEKV-ASGGK 491
S+S +RL+L+ S D L+++D RT + ++ GH V V WS E + SG
Sbjct: 299 SYSKLNRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAY 358
Query: 492 DRVLKLW 498
D KLW
Sbjct: 359 DNQNKLW 365
Score = 72 (30.4 bits), Expect = 3.0e-16, Sum P(3) = 3.0e-16
Identities = 24/95 (25%), Positives = 51/95 (53%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L++GS D+T+ +W+ ++ + KT ++ ++ + + Y S + + +AS DK+++L++ T
Sbjct: 266 LLTGSWDYTLKVWDLSL-EGIKTEISTNKSIFDASY-SKLNRLILTASADKNLRLYDPRT 323
Query: 392 --GKFVA-VFRGHVGPVYQIRFELIYCFRYPSNFY 423
G V + GH V + + F + S Y
Sbjct: 324 NQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAY 358
>UNIPROTKB|D6RFX4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0008200 "ion channel
inhibitor activity" evidence=IEA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0090003
"regulation of establishment of protein localization to plasma
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008200
HOGENOM:HOG000091643 ChiTaRS:GNB2L1 HGNC:HGNC:4399 GO:GO:0015935
EMBL:AC008443 IPI:IPI00966041 ProteinModelPortal:D6RFX4 SMR:D6RFX4
Ensembl:ENST00000507000 UCSC:uc010jls.3 ArrayExpress:D6RFX4
Bgee:D6RFX4 Uniprot:D6RFX4
Length = 194
Score = 209 (78.6 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 54/177 (30%), Positives = 86/177 (48%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GH+ V V S DG+ SGS D T+RLWDL T T + GH VL +A+S+D +
Sbjct: 18 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 77
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS+ ++ W+ H +W++ + + P N P VS D +
Sbjct: 78 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI--IVSCGWDKLVK 134
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCTIKVWETTQGKLIRELKG 279
+W+++ K GHT + V DG + +G +D +W+ +GK + L G
Sbjct: 135 VWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 191
Score = 153 (58.9 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 43/164 (26%), Positives = 81/164 (49%)
Query: 136 DLNTQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKW 195
+ N P GH ++V + S+DG+ +SGS G L+ WD TG + GH K
Sbjct: 8 ETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRR-FVGHTKD 66
Query: 196 ITGISWEPVHLNAPCRRFVSASKDGDARIWD-VSLRKCVICLSGHTLAVTCVKWGGDG-- 252
+ +++ ++ R+ VS S+D ++W+ + + K + H+ V+CV++ +
Sbjct: 67 VLSVAF-----SSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN 121
Query: 253 -VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYAL 295
+I + D +KVW KL GH ++N++ +S + +L
Sbjct: 122 PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL 165
Score = 137 (53.3 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 438 SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKL 497
S+D + LSGS D TL++WD+ T + GH +V +V +S D ++ SG +D+ +KL
Sbjct: 31 SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKL 90
Query: 498 W 498
W
Sbjct: 91 W 91
Score = 137 (53.3 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 54/177 (30%), Positives = 79/177 (44%)
Query: 236 LSGHTLAVTCVKWGGDGVI-YTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
L GH+ V+ V DG +GS D T+++W+ T G R GH V S+A S++
Sbjct: 18 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR 77
Query: 295 -LRTGAFDHTGK--------QYSSPEEMKK--AALERYNKIKGNAPERLVSGSDDFTMFL 343
+ +G+ D T K +Y+ +E + R++ N P +VS D + +
Sbjct: 78 QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN-PI-IVSCGWDKLVKV 135
Query: 344 WEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRG 400
W A K KT GH +N V SPDG AS D LW+ GK + G
Sbjct: 136 WNLANCKL-KTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 191
Score = 125 (49.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 267 ETTQGKLIRELKGHGHWVNSLALSTE--YALRTGAFDHTGKQYSSPEEMKKAALERYNK- 323
ET G R L+GH H+V+ + +S++ +AL +G++D T + + + K
Sbjct: 8 ETNYGIPQRALRGHSHFVSDVVISSDGQFAL-SGSWDGTLRLWDLTTGTTTRRFVGHTKD 66
Query: 324 ---IKGNAPER-LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQ--WVAS 377
+ ++ R +VSGS D T+ LW + + H + V+ V FSP+ + S
Sbjct: 67 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 126
Query: 378 ASFDKSIKLWNGTTGKFVAVFRGHVG 403
+DK +K+WN K GH G
Sbjct: 127 CGWDKLVKVWNLANCKLKTNHIGHTG 152
Score = 112 (44.5 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 352 PKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
P+ + GH V+ V S DGQ+ S S+D +++LW+ TTG F GH V + F
Sbjct: 14 PQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAF 72
Score = 110 (43.8 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 26/71 (36%), Positives = 39/71 (54%)
Query: 428 MSCCMSLYSWSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVA 487
+SC +S ++ + +++S D +KVW++ KLK + GH + V SPDG A
Sbjct: 110 VSCVR--FSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCA 167
Query: 488 SGGKDRVLKLW 498
SGGKD LW
Sbjct: 168 SGGKDGQAMLW 178
Score = 109 (43.4 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 31/80 (38%), Positives = 41/80 (51%)
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTG 392
+SGS D T+ LW+ + R GH + V V FS D + + S S DK+IKLWN T G
Sbjct: 38 LSGSWDGTLRLWDLTTGTTTR-RFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN-TLG 95
Query: 393 --KFVAVFRGHVGPVYQIRF 410
K+ H V +RF
Sbjct: 96 VCKYTVQDESHSEWVSCVRF 115
Score = 99 (39.9 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 21/66 (31%), Positives = 41/66 (62%)
Query: 436 SWSADSRLLLSGSKDSTLKVWD-IRTQKLKQDLPGHADEVFAVDWSPDGEK--VASGGKD 492
++S+D+R ++SGS+D T+K+W+ + K H++ V V +SP+ + S G D
Sbjct: 71 AFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWD 130
Query: 493 RVLKLW 498
+++K+W
Sbjct: 131 KLVKVW 136
Score = 52 (23.4 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 12/32 (37%), Positives = 14/32 (43%)
Query: 438 SADSRLLLSGSKDSTLKVWDIRTQKLKQDLPG 469
S D L SG KD +WD+ K L G
Sbjct: 160 SPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 191
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 197 (74.4 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 78/283 (27%), Positives = 122/283 (43%)
Query: 39 SQIVNKLLNNEEKLPYAFYISDHELLVPLGSYLEKHK--VSVEKVLSIVYQPQAVFRIRP 96
S+I + ++ L +F HE ++ + K + S K SIVY V+ +P
Sbjct: 26 SKITEQQTTHDPALSRSF--RGHEDIITCADFDPKMRQVASCSKD-SIVY----VWNFKP 78
Query: 97 VNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCI 156
R GH AV V +SPDG +AS D +RLW Q+ H + +
Sbjct: 79 QQR-PFKFVGHKGAVYCVKYSPDGETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSM 137
Query: 157 AWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWI-TGISWEPVHLNAPCRRFVS 215
++SADG +L+S S L+ W Q K + +GHK W+ +G+ ++ R S
Sbjct: 138 SFSADGGYLLSSSDDKTLKLWRLQDKKFMCS-FAGHKNWVRSGV------ISPDMRLVAS 190
Query: 216 ASKDGDARIWDVSLRKCVI---------------CLSGHTLAVTCVKWGGDGV-IYTGSQ 259
S D +WD++ +K V S H V+ V + DG + + S
Sbjct: 191 GSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPDGTCLISSSF 250
Query: 260 DCTIKVWETTQGKLIRELKGHGHWVNSLALS-TEYALRTGAFD 301
D IK+ + KLI+ H VNS+++ T Y L + D
Sbjct: 251 DHKIKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSD 293
Score = 172 (65.6 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 54/192 (28%), Positives = 84/192 (43%)
Query: 98 NRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIA 157
++CS I H A+ S++FS DG L S S D T++LW L + M GHKNWV
Sbjct: 122 SKCSI-IKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGV 180
Query: 158 WSADGKHLVSGSKAGELQCWDPQ----TGKPSG-------NPLSGHKKWITGISWEPVHL 206
S D + + SGS + WD K S + ++ + + +S H
Sbjct: 181 ISPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHP 240
Query: 207 NAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTGSQDCTIKV 265
+ C +S+S D +I D+ K + + H V + G + + D IK+
Sbjct: 241 DGTC--LISSSFDHKIKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKI 298
Query: 266 WETTQGKLIREL 277
W+ QG+ I L
Sbjct: 299 WDLRQGRQIYTL 310
Score = 169 (64.5 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 52/169 (30%), Positives = 79/169 (46%)
Query: 345 EPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGP 404
+PA+S+ GH+ ++ F P + VAS S D + +WN + F GH G
Sbjct: 36 DPALSRS----FRGHEDIITCADFDPKMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGA 91
Query: 405 VYQIRFE-----LIYC-----FRYPSNFY---CVVDMSCCMSL--YSWSADSRLLLSGSK 449
VY +++ + C R N C + + C ++ S+SAD LLS S
Sbjct: 92 VYCVKYSPDGETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADGGYLLSSSD 151
Query: 450 DSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
D TLK+W ++ +K GH + V + SPD VASG D+ + LW
Sbjct: 152 DKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVMLW 200
Score = 161 (61.7 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 52/167 (31%), Positives = 76/167 (45%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L+S SDD T+ LW K+ GH+ V SPD + VAS S DK++ LW+
Sbjct: 146 LLSSSDDKTLKLWR-LQDKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVMLWDLNF 204
Query: 392 GKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGSKDS 451
K V+ + ++ I N Y D +S + D L+S S D
Sbjct: 205 QKIVSKYSTLDD---NVKISQI-------NSYS--DHMDTVSQVLFHPDGTCLISSSFDH 252
Query: 452 TLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
+K+ DIR+ KL Q H +V ++ P G +AS G D +K+W
Sbjct: 253 KIKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDSKIKIW 299
Score = 145 (56.1 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 47/191 (24%), Positives = 84/191 (43%)
Query: 121 RQLASGSGDTTVRLWDLNT-QTPMFKCT--GHKNWVLCIAWSADGKHLVSGSKAGELQCW 177
+Q S G+T+ ++ + T P + GH++ + C + + + S SK + W
Sbjct: 15 KQTQSKLGNTSSKITEQQTTHDPALSRSFRGHEDIITCADFDPKMRQVASCSKDSIVYVW 74
Query: 178 DPQTGKPSGNPLS--GHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLR-KCVI 234
+ KP P GHK + + + P S +D R+W +++ KC I
Sbjct: 75 N---FKPQQRPFKFVGHKGAVYCVKYSP-----DGETIASCGQDRQIRLWQNTVQSKCSI 126
Query: 235 CLSGHTLAVTCVKWGGDG-VIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEY 293
+ H A+ + + DG + + S D T+K+W K + GH +WV S +S +
Sbjct: 127 -IKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDM 185
Query: 294 AL-RTGAFDHT 303
L +G+ D T
Sbjct: 186 RLVASGSDDKT 196
Score = 144 (55.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 56/196 (28%), Positives = 87/196 (44%)
Query: 100 CSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCT------------ 147
CS AGH V S SPD R +ASGS D TV LWDLN Q + K +
Sbjct: 167 CS--FAGHKNWVRSGVISPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQIN 224
Query: 148 ---GHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPV 204
H + V + + DG L+S S +++ D ++ K + + H + IS +
Sbjct: 225 SYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIRSNKLIQH-YNAHDAQVNSIS---I 280
Query: 205 HLNAPCRRFV-SASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIY-TGSQDCT 262
H P F+ SA D +IWD+ + + L + +T V++ G + TG
Sbjct: 281 H---PTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDITTVQFNQSGDYFATGGSQNL 337
Query: 263 IKVWETTQGKLIRELK 278
VW+T + I+ ++
Sbjct: 338 CMVWKTNFDQNIQNIE 353
Score = 82 (33.9 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 444 LLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLKLW 498
L S DS +K+WD+R + L + ++ V ++ G+ A+GG + +W
Sbjct: 287 LASAGSDSKIKIWDLRQGRQIYTLYSNDKDITTVQFNQSGDYFATGGSQNLCMVW 341
Score = 71 (30.1 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 19/79 (24%), Positives = 36/79 (45%)
Query: 332 LVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTT 391
L+S S D + + + +K + H VN + P G ++ASA D IK+W+
Sbjct: 245 LISSSFDHKIKITDIRSNKLIQ-HYNAHDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQ 303
Query: 392 GKFVAVFRGHVGPVYQIRF 410
G+ + + + ++F
Sbjct: 304 GRQIYTLYSNDKDITTVQF 322
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 231 (86.4 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 91/338 (26%), Positives = 158/338 (46%)
Query: 85 VYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDL----NTQ 140
V+ P+ V R+ V + H V V FS DG+ LA+G + + +++D+ N
Sbjct: 249 VFNPE-VQRVLDVELVHHLV--HDSVVCCVRFSRDGKYLATGC-NRSAQIFDVTLGQNVA 304
Query: 141 TPMFKCTGHKN--WVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG 198
+ ++ + +S DGK+L +G++ +++ WD T + + SGH++ I
Sbjct: 305 VLQDESVDKSGDLYIRSVCFSPDGKYLATGAEDKQIRVWDIAT-RTIKHIFSGHEQDIYS 363
Query: 199 ISWEPVHLNAPCRRFVSASKDGDARIWDVSLRKCVICLSGHTLAVTCVKWGGDGV-IYTG 257
+ + N R S S D R+WD++ K V LS VT V DG+ + G
Sbjct: 364 LDFAG---NG--RYIASGSGDKTVRLWDIAEGKLVYTLSIED-GVTTVAMSPDGLYVAAG 417
Query: 258 SQDCTIKVWETTQGKLIRELK---GHGHWVNSLALSTE-YALRTGAFDHTGK--QYSSPE 311
S D T++VW+TT G L+ L+ GH V S+A + L +G+ D T K + + P
Sbjct: 418 SLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPR 477
Query: 312 EMKKAALER---YNKIKGN---------APER--LVSGSDDFTMFLWEPAVSKQPKTRMT 357
+ +A + + +G+ P+ ++SGS D + W+P ++ + +
Sbjct: 478 QQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDP-ITGNAQMMLQ 536
Query: 358 GHQQLVNHVYFSPDGQWVASASFDKSIKLW--NGTTGK 393
GH+ V V SP G A+ S D ++W + TG+
Sbjct: 537 GHKNSVISVAPSPTGNLFATGSGDMRARIWRYSAYTGR 574
Score = 191 (72.3 bits), Expect = 9.7e-12, P = 9.7e-12
Identities = 78/302 (25%), Positives = 134/302 (44%)
Query: 212 RFVSASKDGDARIWDVSLRKCVICLSGHT------LAVTCVKWGGDG-VIYTGSQDCTIK 264
++++ + A+I+DV+L + V L + L + V + DG + TG++D I+
Sbjct: 282 KYLATGCNRSAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVCFSPDGKYLATGAEDKQIR 341
Query: 265 VWETTQGKLIRELKGHGHWVNSL--ALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYN 322
VW+ + GH + SL A + Y + +G+ D T + + E L +
Sbjct: 342 VWDIATRTIKHIFSGHEQDIYSLDFAGNGRY-IASGSGDKTVRLWDIAEGKLVYTLSIED 400
Query: 323 KIKGNA--PERL--VSGSDDFTMFLWEPAVSK--QPKTRMTGHQQLVNHVYFSPDGQWVA 376
+ A P+ L +GS D T+ +W+ + GH+ V V F+P+G+ +
Sbjct: 401 GVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELV 460
Query: 377 SASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYS 436
S S DK+IKLW + G G ++ F +F +S C++
Sbjct: 461 SGSLDKTIKLWELNLPRQQYNSAGKGGKCHRT-------FEGHKDFV----LSVCLT--- 506
Query: 437 WSADSRLLLSGSKDSTLKVWDIRTQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVLK 496
D ++SGSKD ++ WD T + L GH + V +V SP G A+G D +
Sbjct: 507 --PDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSPTGNLFATGSGDMRAR 564
Query: 497 LW 498
+W
Sbjct: 565 IW 566
>UNIPROTKB|F1P2Y8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0070545 "PeBoW complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:AADN02019869 IPI:IPI00587836
Ensembl:ENSGALT00000013803 Uniprot:F1P2Y8
Length = 411
Score = 227 (85.0 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 53/162 (32%), Positives = 85/162 (52%)
Query: 102 ATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSAD 161
AT++GHTEA+ SV +S D ++ S S D T++LWD T TG+K + +++S
Sbjct: 239 ATLSGHTEAISSVLWS-DAEEICSASWDHTIKLWDAETGGLKSTLTGNKVFN-SVSYSPL 296
Query: 162 GKHLVSGSKAGELQCWDPQT--GKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKD 219
+ L SGS ++ WDP++ G L+ H W+T + W P H + + +S S D
Sbjct: 297 CRRLASGSTDRHIRLWDPRSKDGSLVLLSLTSHTGWVTSVKWSPTHEH----QLISGSLD 352
Query: 220 GDARIWDV-SLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQD 260
++WD S + + L+ H V CV W G++ +G D
Sbjct: 353 NIVKLWDTRSCKAPLYDLAAHEDKVLCVDWTEAGLLLSGGAD 394
Score = 173 (66.0 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 65/231 (28%), Positives = 104/231 (45%)
Query: 280 HGHWVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAPER-------L 332
H W++S+ + E+ L TG +D T + +S + +K A + L
Sbjct: 88 HDDWISSVQATEEWIL-TGCYDQTARIWSLEGKSIMTIAGHTEVVKDVAWVKQDSLSCLL 146
Query: 333 VSGSDDFTMFLWEPAVSKQPKTRM---TGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
+S S D T+ LWE V K + GH V+ V S S+DK +K+W+
Sbjct: 147 ISASMDQTILLWEWNVEKNKVKALHCCRGHAGSVDSVAVDCTRTKFCSGSWDKMLKIWSA 206
Query: 390 T-TGKFVAVFRGHVGPVYQIRFELIYCFRYPSNFYCVVDMSCCMSLYSWSADSRLLLSGS 448
T + + P + + E + R P + + +S WS D+ + S S
Sbjct: 207 VPTDEEDEMEEAANRPRKKQKTEQLGLTRTP--LATLSGHTEAISSVLWS-DAEEICSAS 263
Query: 449 KDSTLKVWDIRTQKLKQDLPGHADEVF-AVDWSPDGEKVASGGKDRVLKLW 498
D T+K+WD T LK L G+ +VF +V +SP ++ASG DR ++LW
Sbjct: 264 WDHTIKLWDAETGGLKSTLTGN--KVFNSVSYSPLCRRLASGSTDRHIRLW 312
Score = 171 (65.3 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 51/178 (28%), Positives = 84/178 (47%)
Query: 139 TQTPMFKCTGHKNWVLCIAWSADGKHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITG 198
T+TP+ +GH + + WS D + + S S ++ WD +TG L+G+K +
Sbjct: 234 TRTPLATLSGHTEAISSVLWS-DAEEICSASWDHTIKLWDAETGGLKST-LTGNKVF-NS 290
Query: 199 ISWEPVHLNAPCRRFVSASKDGDARIWDVSLRK---CVICLSGHTLAVTCVKWGG--DGV 253
+S+ P+ CRR S S D R+WD + ++ L+ HT VT VKW +
Sbjct: 291 VSYSPL-----CRRLASGSTDRHIRLWDPRSKDGSLVLLSLTSHTGWVTSVKWSPTHEHQ 345
Query: 254 IYTGSQDCTIKVWETTQGKL-IRELKGHGHWVNSLALSTEYALRTGAFDHTGKQYSSP 310
+ +GS D +K+W+T K + +L H V + + L +G D+ Y P
Sbjct: 346 LISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLCVDWTEAGLLLSGGADNKLYCYRYP 403
Score = 147 (56.8 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 50/192 (26%), Positives = 92/192 (47%)
Query: 219 DGDARIWDVSLRKCVICLSGHTLAVTCVKW-GGDGV---IYTGSQDCTIKVWE-TTQGKL 273
D ARIW + K ++ ++GHT V V W D + + + S D TI +WE +
Sbjct: 108 DQTARIWSLE-GKSIMTIAGHTEVVKDVAWVKQDSLSCLLISASMDQTILLWEWNVEKNK 166
Query: 274 IREL---KGHGHWVNSLALS-TEYALRTGAFDHTGKQYSSPEEMKKAALERYNKIKGNAP 329
++ L +GH V+S+A+ T +G++D K +S+ ++ +E N P
Sbjct: 167 VKALHCCRGHAGSVDSVAVDCTRTKFCSGSWDKMLKIWSAVPTDEEDEMEE----AANRP 222
Query: 330 ERLVSGSDDFTMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNG 389
+ + +++ P ++GH + ++ V +S D + + SAS+D +IKLW+
Sbjct: 223 RKKQKTE--------QLGLTRTPLATLSGHTEAISSVLWS-DAEEICSASWDHTIKLWDA 273
Query: 390 TTGKFVAVFRGH 401
TG + G+
Sbjct: 274 ETGGLKSTLTGN 285
Score = 117 (46.2 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 55/210 (26%), Positives = 88/210 (41%)
Query: 26 PMYFPQNAGPQQLSQIVNKLLN----NEEKLPYAFYISDHELLVPLGSYLEKHKVSVEKV 81
P P + LS ++NKLL + + + + F I L VPL +++E +S E+V
Sbjct: 9 PFSVPAASETADLSHLINKLLAARGADHKYVEFDFLIQGQFLRVPLVTHMEMENISTEEV 68
Query: 82 LSIVYQPQAVFRIRPVNRCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQT 141
+ I Y + +P C H + + SV + + + +G D T R+W L ++
Sbjct: 69 VEIEYV-EKYMAPQP-EECIF----HDDWISSVQATEEW--ILTGCYDQTARIWSLEGKS 120
Query: 142 PMFKCTGHKNWVLCIAW-SADGKH--LVSGSKAGELQCWDPQTGKPSGNPLS---GHKKW 195
M GH V +AW D L+S S + W+ K L GH
Sbjct: 121 IM-TIAGHTEVVKDVAWVKQDSLSCLLISASMDQTILLWEWNVEKNKVKALHCCRGH--- 176
Query: 196 ITGISWEPVHLNAPCRRFVSASKDGDARIW 225
G S + V ++ +F S S D +IW
Sbjct: 177 -AG-SVDSVAVDCTRTKFCSGSWDKMLKIW 204
Score = 110 (43.8 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 26/61 (42%), Positives = 34/61 (55%)
Query: 437 WS-ADSRLLLSGSKDSTLKVWDIRTQKLK-QDLPGHADEVFAVDWSPDGEKVASGGKDRV 494
WS L+SGS D+ +K+WD R+ K DL H D+V VDW+ G + SGG D
Sbjct: 338 WSPTHEHQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLCVDWTEAG-LLLSGGADNK 396
Query: 495 L 495
L
Sbjct: 397 L 397
Score = 102 (41.0 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 436 SWSADSRLLLSGSKDSTLKVWDIRTQK---LKQDLPGHADEVFAVDWSPDGE-KVASGGK 491
S+S R L SGS D +++WD R++ + L H V +V WSP E ++ SG
Sbjct: 292 SYSPLCRRLASGSTDRHIRLWDPRSKDGSLVLLSLTSHTGWVTSVKWSPTHEHQLISGSL 351
Query: 492 DRVLKLW 498
D ++KLW
Sbjct: 352 DNIVKLW 358
Score = 101 (40.6 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 42/157 (26%), Positives = 72/157 (45%)
Query: 236 LSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA- 294
LSGHT A++ V W I + S D TIK+W+ G L L G+ + NS++ S
Sbjct: 241 LSGHTEAISSVLWSDAEEICSASWDHTIKLWDAETGGLKSTLTGNKVF-NSVSYSPLCRR 299
Query: 295 LRTGAFDHTGKQY---SSPEEMKKAALERYN----KIKGNAPE--RLVSGSDDFTMFLWE 345
L +G+ D + + S + +L + +K + +L+SGS D + LW+
Sbjct: 300 LASGSTDRHIRLWDPRSKDGSLVLLSLTSHTGWVTSVKWSPTHEHQLISGSLDNIVKLWD 359
Query: 346 PAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDK 382
K P + H+ V V ++ G ++ + +K
Sbjct: 360 TRSCKAPLYDLAAHEDKVLCVDWTEAGLLLSGGADNK 396
Score = 73 (30.8 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 29/106 (27%), Positives = 43/106 (40%)
Query: 331 RLVSGSDDFTMFLWEPAVSKQPKT--RMTGHQQLVNHVYFSPDGQW-VASASFDKSIKLW 387
RL SGS D + LW+P +T H V V +SP + + S S D +KLW
Sbjct: 299 RLASGSTDRHIRLWDPRSKDGSLVLLSLTSHTGWVTSVKWSPTHEHQLISGSLDNIVKLW 358
Query: 388 NGTTGKFVAV-FRGHVGPVYQIRF------------ELIYCFRYPS 420
+ + K H V + + +YC+RYP+
Sbjct: 359 DTRSCKAPLYDLAAHEDKVLCVDWTEAGLLLSGGADNKLYCYRYPA 404
Score = 58 (25.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 254 IYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLA 288
I TG D T ++W + +GK I + GH V +A
Sbjct: 102 ILTGCYDQTARIW-SLEGKSIMTIAGHTEVVKDVA 135
>ASPGD|ASPL0000008575 [details] [associations]
symbol:AN6217 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:BN001301 EMBL:AACD01000105 KO:K03361
RefSeq:XP_663821.1 ProteinModelPortal:Q5AZR3 STRING:Q5AZR3
EnsemblFungi:CADANIAT00006785 GeneID:2870808 KEGG:ani:AN6217.2
HOGENOM:HOG000164406 OMA:SISEGRC OrthoDB:EOG4XWK5Z Uniprot:Q5AZR3
Length = 618
Score = 231 (86.4 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 65/196 (33%), Positives = 91/196 (46%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
+ GHT V + S D SGS DTT+R+WDL T T GH+ V C+A G
Sbjct: 328 LRGHTSTVRCLKMS-DKNTAISGSRDTTLRIWDLRTGTCRSVLVGHQASVRCLA--VHGD 384
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
+VSGS + W G+ LSGH I I+++ RR + S D R
Sbjct: 385 IVVSGSYDTTARVWSISEGRFL-RALSGHFSQIYAIAFDG-------RRIATGSLDTSVR 436
Query: 224 IWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHW 283
IWD + +C L GHT V ++ GD ++ TG D +++VW T+ I L H +
Sbjct: 437 IWDPNTGQCHAILQGHTSLVGQLQMSGDTLV-TGGSDGSVRVWSLTRMAPIHRLAAHDNS 495
Query: 284 VNSLALSTEYALRTGA 299
V SL + G+
Sbjct: 496 VTSLQFDNNRIVSGGS 511
Score = 210 (79.0 bits), Expect = 8.8e-14, P = 8.8e-14
Identities = 63/252 (25%), Positives = 117/252 (46%)
Query: 163 KHLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDA 222
K++V+ ++ +D T + L GH + G+ W V + VS D +
Sbjct: 264 KYIVASLDNAKIHVYD--TNGENQKTLEGH---VMGV-WAMVPWD---NILVSGGCDREV 314
Query: 223 RIWDVSLRKCVICLSGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGH 282
R+W+++ + + L GHT V C+K +GS+D T+++W+ G L GH
Sbjct: 315 RVWNMATGESIYLLRGHTSTVRCLKMSDKNTAISGSRDTTLRIWDLRTGTCRSVLVGHQA 374
Query: 283 WVNSLALSTEYALRTGAFDHTGKQYSSPEEMKKAALE-RYNKIKGNAPE--RLVSGSDDF 339
V LA+ + + +G++D T + +S E AL +++I A + R+ +GS D
Sbjct: 375 SVRCLAVHGDIVV-SGSYDTTARVWSISEGRFLRALSGHFSQIYAIAFDGRRIATGSLDT 433
Query: 340 TMFLWEPAVSKQPKTRMTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFR 399
++ +W+P Q + GH LV + S G + + D S+++W+ T +
Sbjct: 434 SVRIWDPNTG-QCHAILQGHTSLVGQLQMS--GDTLVTGGSDGSVRVWSLTRMAPIHRLA 490
Query: 400 GHVGPVYQIRFE 411
H V ++F+
Sbjct: 491 AHDNSVTSLQFD 502
Score = 210 (79.0 bits), Expect = 8.8e-14, P = 8.8e-14
Identities = 73/280 (26%), Positives = 135/280 (48%)
Query: 236 LSGHTLAV-TCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLALSTEYA 294
L GH + V V W D ++ +G D ++VW G+ I L+GH V L +S +
Sbjct: 288 LEGHVMGVWAMVPW--DNILVSGGCDREVRVWNMATGESIYLLRGHTSTVRCLKMSDKNT 345
Query: 295 LRTGAFDHTGKQYSSPEEMKKAALERYN-KIKGNAP--ERLVSGSDDFTMFLWEPAVSKQ 351
+G+ D T + + ++ L + ++ A + +VSGS D T +W ++S+
Sbjct: 346 AISGSRDTTLRIWDLRTGTCRSVLVGHQASVRCLAVHGDIVVSGSYDTTARVW--SISEG 403
Query: 352 PKTR-MTGHQQLVNHVYFSPDGQWVASASFDKSIKLWNGTTGKFVAVFRGHVGPVYQIRF 410
R ++GH + + F DG+ +A+ S D S+++W+ TG+ A+ +GH V Q++
Sbjct: 404 RFLRALSGHFSQIYAIAF--DGRRIATGSLDTSVRIWDPNTGQCHAILQGHTSLVGQLQM 461
Query: 411 E---LIYCFRYPS-NFYCVVDMSCCM-------SLYSWSADSRLLLSGSKDSTLKVWDIR 459
L+ S + + M+ S+ S D+ ++SG D +KVW +R
Sbjct: 462 SGDTLVTGGSDGSVRVWSLTRMAPIHRLAAHDNSVTSLQFDNNRIVSGGSDGRVKVWCLR 521
Query: 460 TQKLKQDLPGHADEVFAVDWSPDGEKVASGGKDR-VLKLW 498
T +L ++L +D V+ V + + + S R V+++W
Sbjct: 522 TGQLLRELSTPSDTVWRVTFEEEKAVIMSSRSGRTVMEVW 561
Score = 145 (56.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 39/122 (31%), Positives = 62/122 (50%)
Query: 104 IAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAWSADGK 163
++GH + ++AF DGR++A+GS DT+VR+WD NT GH + V + S D
Sbjct: 409 LSGHFSQIYAIAF--DGRRIATGSLDTSVRIWDPNTGQCHAILQGHTSLVGQLQMSGDT- 465
Query: 164 HLVSGSKAGELQCWDPQTGKPSGNPLSGHKKWITGISWEPVHLNAPCRRFVSASKDGDAR 223
LV+G G ++ W P + L+ H +T + ++ N R VS DG +
Sbjct: 466 -LVTGGSDGSVRVWSLTRMAPI-HRLAAHDNSVTSLQFD----N---NRIVSGGSDGRVK 516
Query: 224 IW 225
+W
Sbjct: 517 VW 518
Score = 123 (48.4 bits), Expect = 0.00031, P = 0.00031
Identities = 27/85 (31%), Positives = 42/85 (49%)
Query: 99 RCSATIAGHTEAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPMFKCTGHKNWVLCIAW 158
+C A + GHT V + S D L +G D +VR+W L P+ + H N V + +
Sbjct: 444 QCHAILQGHTSLVGQLQMSGD--TLVTGGSDGSVRVWSLTRMAPIHRLAAHDNSVTSLQF 501
Query: 159 SADGKHLVSGSKAGELQCWDPQTGK 183
D +VSG G ++ W +TG+
Sbjct: 502 --DNNRIVSGGSDGRVKVWCLRTGQ 524
WARNING: HSPs involving 1457 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.430 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 500 500 0.00084 119 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1707
No. of states in DFA: 626 (67 KB)
Total size of DFA: 360 KB (2175 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 45.03u 0.13s 45.16t Elapsed: 00:00:02
Total cpu time: 45.22u 0.14s 45.36t Elapsed: 00:00:03
Start: Sat May 11 14:26:12 2013 End: Sat May 11 14:26:15 2013
WARNINGS ISSUED: 2