Query 010820
Match_columns 500
No_of_seqs 289 out of 2882
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 04:56:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010820.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010820hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK06833 L-fuculose phosphate 100.0 4E-45 8.7E-50 342.2 20.7 201 26-256 2-204 (214)
2 PRK05874 L-fuculose-phosphate 100.0 3.9E-45 8.4E-50 341.1 19.9 201 27-256 4-207 (217)
3 PRK08087 L-fuculose phosphate 100.0 5.7E-45 1.2E-49 341.1 19.4 201 25-256 1-203 (215)
4 PRK08193 araD L-ribulose-5-pho 100.0 7.3E-44 1.6E-48 336.7 20.8 204 27-255 2-217 (231)
5 PRK13213 araD L-ribulose-5-pho 100.0 1E-43 2.2E-48 332.4 21.3 202 27-254 2-217 (231)
6 PRK05834 hypothetical protein; 100.0 1.1E-43 2.4E-48 325.2 20.5 186 27-242 3-192 (194)
7 PRK12348 sgaE L-ribulose-5-pho 100.0 1E-43 2.2E-48 334.8 20.5 201 28-255 2-214 (228)
8 TIGR00760 araD L-ribulose-5-ph 100.0 1.6E-43 3.4E-48 334.1 20.9 204 27-256 2-219 (231)
9 PRK07490 hypothetical protein; 100.0 9.6E-44 2.1E-48 338.5 19.1 209 22-256 3-215 (245)
10 cd00398 Aldolase_II Class II A 100.0 1.1E-43 2.3E-48 332.3 18.4 200 29-256 2-205 (209)
11 PRK12347 sgbE L-ribulose-5-pho 100.0 3.2E-43 6.9E-48 331.3 21.1 203 27-254 2-217 (231)
12 PRK06755 hypothetical protein; 100.0 8.4E-43 1.8E-47 321.6 23.0 199 28-243 5-204 (209)
13 PRK08130 putative aldolase; Va 100.0 3E-43 6.5E-48 329.5 20.1 202 25-256 1-206 (213)
14 PRK06557 L-ribulose-5-phosphat 100.0 3.8E-43 8.2E-48 331.0 20.7 202 27-255 8-211 (221)
15 PRK06754 mtnB methylthioribulo 100.0 8.2E-43 1.8E-47 324.6 22.3 204 26-244 3-206 (208)
16 PRK13145 araD L-ribulose-5-pho 100.0 4.3E-43 9.3E-48 331.1 20.5 205 25-255 1-218 (234)
17 PRK06486 hypothetical protein; 100.0 3.7E-43 8.1E-48 336.7 19.1 208 22-256 19-231 (262)
18 PRK09220 methylthioribulose-1- 100.0 2.9E-42 6.2E-47 319.9 22.8 201 25-242 1-203 (204)
19 PRK06661 hypothetical protein; 100.0 8.2E-43 1.8E-47 328.9 18.6 201 29-256 2-207 (231)
20 TIGR01086 fucA L-fuculose phos 100.0 1.1E-42 2.4E-47 325.7 19.2 197 27-255 2-201 (214)
21 PRK07090 class II aldolase/add 100.0 1.5E-42 3.2E-47 332.3 19.9 215 16-258 14-233 (260)
22 PRK06357 hypothetical protein; 100.0 3.2E-42 7E-47 321.2 21.2 193 27-243 3-204 (216)
23 PRK06208 hypothetical protein; 100.0 1.4E-42 3E-47 332.9 18.6 204 26-257 39-246 (274)
24 PRK07044 aldolase II superfami 100.0 2.2E-42 4.8E-47 330.9 19.0 208 24-257 11-221 (252)
25 PRK08333 L-fuculose phosphate 100.0 5.8E-42 1.2E-46 313.7 20.8 179 28-238 2-183 (184)
26 TIGR03328 salvage_mtnB methylt 100.0 1.1E-41 2.4E-46 313.7 21.0 190 34-239 1-192 (193)
27 PRK08660 L-fuculose phosphate 100.0 2.7E-41 5.9E-46 308.4 20.7 180 30-241 1-180 (181)
28 COG0235 AraD Ribulose-5-phosph 100.0 2.1E-41 4.5E-46 317.4 16.7 193 25-245 3-199 (219)
29 PRK03634 rhamnulose-1-phosphat 100.0 1.5E-40 3.2E-45 320.5 18.2 212 26-257 5-261 (274)
30 TIGR02624 rhamnu_1P_ald rhamnu 100.0 2.5E-40 5.4E-45 317.1 18.6 210 28-256 7-258 (270)
31 PF00596 Aldolase_II: Class II 100.0 8E-40 1.7E-44 300.8 19.3 178 32-235 1-184 (184)
32 KOG2631 Class II aldolase/addu 100.0 4.3E-33 9.3E-38 243.5 21.1 210 21-243 11-226 (238)
33 TIGR01691 enolase-ppase 2,3-di 100.0 3.5E-27 7.6E-32 220.8 17.5 212 284-500 1-220 (220)
34 PRK08324 short chain dehydroge 99.9 5.7E-28 1.2E-32 264.4 13.9 198 28-253 14-238 (681)
35 TIGR02632 RhaD_aldol-ADH rhamn 99.9 4.9E-27 1.1E-31 255.7 15.6 185 31-242 2-212 (676)
36 PLN02770 haloacid dehalogenase 99.9 2.8E-26 6.1E-31 220.9 15.6 206 281-499 19-230 (248)
37 COG0546 Gph Predicted phosphat 99.9 1.3E-25 2.9E-30 212.3 15.3 202 282-500 2-213 (220)
38 PRK13226 phosphoglycolate phos 99.9 1.5E-25 3.2E-30 213.4 14.9 203 282-500 10-220 (229)
39 PRK13288 pyrophosphatase PpaX; 99.9 1.5E-25 3.2E-30 211.4 13.3 199 282-500 1-206 (214)
40 PLN02575 haloacid dehalogenase 99.9 2.8E-25 6E-30 221.7 14.4 206 278-500 125-337 (381)
41 PLN03243 haloacid dehalogenase 99.9 3.3E-25 7.1E-30 213.9 13.7 204 280-500 20-230 (260)
42 PRK11587 putative phosphatase; 99.9 9.6E-25 2.1E-29 206.4 16.1 196 282-500 1-203 (218)
43 PRK10826 2-deoxyglucose-6-phos 99.9 1.5E-24 3.3E-29 205.7 14.7 204 281-500 4-215 (222)
44 TIGR01449 PGP_bact 2-phosphogl 99.9 2.5E-24 5.5E-29 202.7 14.9 198 287-500 1-209 (213)
45 TIGR01422 phosphonatase phosph 99.9 1.3E-24 2.7E-29 210.4 12.8 124 374-500 97-248 (253)
46 TIGR02253 CTE7 HAD superfamily 99.9 3.8E-24 8.3E-29 202.7 15.6 123 374-500 92-220 (221)
47 PRK13223 phosphoglycolate phos 99.9 4.6E-24 9.9E-29 208.0 15.7 205 280-500 9-225 (272)
48 TIGR03351 PhnX-like phosphonat 99.9 2.7E-24 5.8E-29 203.7 13.2 202 284-500 1-215 (220)
49 PRK13478 phosphonoacetaldehyde 99.9 7.3E-24 1.6E-28 206.6 15.0 106 374-482 99-207 (267)
50 TIGR01454 AHBA_synth_RP 3-amin 99.9 8.2E-24 1.8E-28 198.1 14.1 192 287-500 1-199 (205)
51 PRK14988 GMP/IMP nucleotidase; 99.9 2.2E-23 4.7E-28 197.6 16.1 105 373-481 90-197 (224)
52 PRK13222 phosphoglycolate phos 99.9 2.2E-23 4.8E-28 198.1 16.2 204 281-500 3-217 (226)
53 PRK09449 dUMP phosphatase; Pro 99.9 1.6E-23 3.5E-28 198.9 14.9 122 375-500 94-218 (224)
54 PLN02940 riboflavin kinase 99.9 3.2E-23 6.9E-28 210.9 16.3 201 283-500 10-216 (382)
55 COG4229 Predicted enolase-phos 99.9 2.4E-23 5.3E-28 179.5 12.1 214 284-498 4-224 (229)
56 PRK13225 phosphoglycolate phos 99.9 1.9E-23 4.2E-28 202.9 12.4 200 282-500 60-263 (273)
57 PLN02779 haloacid dehalogenase 99.9 7.8E-23 1.7E-27 200.6 16.1 125 375-500 143-268 (286)
58 COG0637 Predicted phosphatase/ 99.9 5.8E-23 1.3E-27 193.9 14.3 183 283-482 1-190 (221)
59 TIGR01428 HAD_type_II 2-haloal 99.9 1.3E-22 2.9E-27 188.8 16.0 106 374-483 90-197 (198)
60 PRK10563 6-phosphogluconate ph 99.9 7.2E-23 1.6E-27 194.1 11.1 196 283-499 3-207 (221)
61 TIGR02254 YjjG/YfnB HAD superf 99.9 5.6E-22 1.2E-26 188.2 16.9 121 375-500 96-220 (224)
62 PRK06698 bifunctional 5'-methy 99.9 3.4E-22 7.3E-27 209.3 13.4 204 282-500 239-449 (459)
63 PRK10748 flavin mononucleotide 99.9 9E-22 1.9E-26 188.5 14.8 117 374-500 111-234 (238)
64 PRK10725 fructose-1-P/6-phosph 99.9 3E-21 6.5E-26 178.1 14.4 178 282-478 3-186 (188)
65 TIGR02009 PGMB-YQAB-SF beta-ph 99.9 2.1E-21 4.5E-26 178.7 13.0 98 374-477 86-185 (185)
66 TIGR01990 bPGM beta-phosphoglu 99.9 2.1E-21 4.5E-26 178.7 12.4 97 375-477 86-184 (185)
67 TIGR02252 DREG-2 REG-2-like, H 99.9 6.3E-21 1.4E-25 178.3 14.8 97 375-476 104-203 (203)
68 COG1011 Predicted hydrolase (H 99.9 8.6E-21 1.9E-25 180.6 15.3 122 374-500 97-222 (229)
69 PF13419 HAD_2: Haloacid dehal 99.8 4.3E-21 9.4E-26 174.1 11.4 101 373-477 74-176 (176)
70 PLN02919 haloacid dehalogenase 99.8 1.8E-20 3.8E-25 212.2 17.6 203 280-500 71-285 (1057)
71 TIGR01993 Pyr-5-nucltdase pyri 99.8 4.1E-20 8.9E-25 170.0 15.3 97 374-477 82-184 (184)
72 PHA02597 30.2 hypothetical pro 99.8 2.7E-20 5.9E-25 173.1 12.8 118 374-500 72-194 (197)
73 TIGR01509 HAD-SF-IA-v3 haloaci 99.8 1.5E-19 3.2E-24 165.9 15.7 98 375-477 84-183 (183)
74 PLN02811 hydrolase 99.8 5.6E-20 1.2E-24 174.0 12.7 124 374-500 76-206 (220)
75 TIGR02247 HAD-1A3-hyp Epoxide 99.8 7.6E-20 1.7E-24 172.0 13.0 103 374-480 92-198 (211)
76 PRK09456 ?-D-glucose-1-phospha 99.8 1.9E-19 4E-24 167.8 13.2 102 376-480 84-187 (199)
77 TIGR01548 HAD-SF-IA-hyp1 haloa 99.8 5.1E-19 1.1E-23 164.5 15.4 90 376-470 106-197 (197)
78 TIGR00213 GmhB_yaeD D,D-heptos 99.8 2.6E-19 5.6E-24 163.3 13.0 123 376-500 26-174 (176)
79 PRK08942 D,D-heptose 1,7-bisph 99.8 5.9E-19 1.3E-23 161.8 12.7 119 376-500 29-172 (181)
80 PRK06769 hypothetical protein; 99.8 7.1E-19 1.5E-23 159.7 11.9 121 376-500 28-167 (173)
81 KOG2914 Predicted haloacid-hal 99.8 3.3E-18 7.1E-23 158.6 15.7 207 280-499 6-217 (222)
82 TIGR01656 Histidinol-ppas hist 99.8 1.3E-18 2.8E-23 153.8 12.0 104 376-480 27-147 (147)
83 COG3347 Uncharacterized conser 99.8 2.8E-18 6.1E-23 165.0 14.1 195 32-249 18-230 (404)
84 TIGR01549 HAD-SF-IA-v1 haloaci 99.8 8.5E-18 1.8E-22 149.9 14.2 91 374-471 62-154 (154)
85 KOG3085 Predicted hydrolase (H 99.8 1.2E-17 2.5E-22 155.3 13.6 101 375-480 112-215 (237)
86 TIGR00338 serB phosphoserine p 99.7 2E-17 4.2E-22 156.5 14.3 114 375-496 84-209 (219)
87 TIGR01662 HAD-SF-IIIA HAD-supe 99.7 1E-17 2.2E-22 145.5 11.2 98 376-479 25-132 (132)
88 KOG2630 Enolase-phosphatase E- 99.7 6.4E-17 1.4E-21 145.5 15.7 216 282-499 6-247 (254)
89 TIGR01493 HAD-SF-IA-v2 Haloaci 99.7 1.5E-18 3.2E-23 158.2 4.6 86 374-470 88-175 (175)
90 PLN02954 phosphoserine phospha 99.7 3.6E-17 7.9E-22 155.3 13.3 122 375-500 83-219 (224)
91 TIGR01261 hisB_Nterm histidino 99.7 4.3E-17 9.3E-22 145.6 10.5 99 376-480 29-149 (161)
92 TIGR01685 MDP-1 magnesium-depe 99.7 4.1E-17 8.9E-22 146.7 9.7 104 374-481 43-160 (174)
93 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.7 4.7E-16 1E-20 144.9 13.5 103 375-481 79-193 (201)
94 KOG3109 Haloacid dehalogenase- 99.7 8.8E-16 1.9E-20 137.5 13.9 186 280-481 11-208 (244)
95 TIGR01664 DNA-3'-Pase DNA 3'-p 99.7 4.1E-16 9E-21 140.2 10.5 94 377-476 43-160 (166)
96 TIGR01672 AphA HAD superfamily 99.6 1.8E-15 4E-20 142.8 14.0 95 375-480 113-213 (237)
97 PRK11133 serB phosphoserine ph 99.6 1.9E-15 4.2E-20 149.6 13.6 113 375-495 180-304 (322)
98 TIGR01668 YqeG_hyp_ppase HAD s 99.6 5.8E-15 1.3E-19 133.6 12.9 96 376-482 43-140 (170)
99 PRK09552 mtnX 2-hydroxy-3-keto 99.6 9.2E-15 2E-19 138.2 13.9 119 375-499 73-207 (219)
100 PRK13582 thrH phosphoserine ph 99.6 3.5E-15 7.5E-20 139.6 8.8 119 374-500 66-191 (205)
101 PRK05446 imidazole glycerol-ph 99.6 2E-14 4.2E-19 143.2 12.6 100 375-480 29-150 (354)
102 cd01427 HAD_like Haloacid deha 99.5 3.2E-14 7E-19 123.0 11.0 99 375-477 23-139 (139)
103 COG2179 Predicted hydrolase of 99.5 3.8E-13 8.3E-18 116.0 10.1 92 377-479 47-139 (175)
104 KOG3699 Cytoskeletal protein A 99.5 1.7E-13 3.8E-18 139.2 9.3 160 77-256 87-250 (598)
105 TIGR01489 DKMTPPase-SF 2,3-dik 99.5 3.6E-13 7.9E-18 123.9 10.5 93 375-474 71-185 (188)
106 TIGR01670 YrbI-phosphatas 3-de 99.5 1.2E-13 2.5E-18 123.0 6.9 99 384-496 36-134 (154)
107 TIGR02726 phenyl_P_delta pheny 99.4 1.6E-13 3.4E-18 123.2 7.5 86 383-479 41-126 (169)
108 PRK11009 aphA acid phosphatase 99.4 2.4E-12 5.2E-17 121.6 15.9 97 374-481 112-214 (237)
109 TIGR03333 salvage_mtnX 2-hydro 99.4 7.4E-13 1.6E-17 124.7 12.2 94 375-472 69-177 (214)
110 PF00702 Hydrolase: haloacid d 99.4 7.7E-13 1.7E-17 124.3 12.3 88 375-471 126-215 (215)
111 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.4 2.1E-12 4.6E-17 120.4 9.6 99 375-477 86-197 (202)
112 PRK10444 UMP phosphatase; Prov 99.4 1E-12 2.2E-17 126.1 7.3 70 430-500 171-245 (248)
113 TIGR02137 HSK-PSP phosphoserin 99.4 3.3E-12 7.1E-17 118.7 10.3 99 375-481 67-174 (203)
114 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.3 7.6E-13 1.6E-17 127.4 5.5 121 377-500 122-249 (249)
115 TIGR01488 HAD-SF-IB Haloacid D 99.3 6E-12 1.3E-16 114.7 10.9 92 375-470 72-177 (177)
116 PLN02645 phosphoglycolate phos 99.3 4.9E-13 1.1E-17 133.0 1.5 113 384-500 178-303 (311)
117 PHA02530 pseT polynucleotide k 99.3 8.2E-12 1.8E-16 124.0 10.0 102 376-480 187-298 (300)
118 TIGR01452 PGP_euk phosphoglyco 99.3 1.6E-12 3.5E-17 127.5 4.4 119 377-500 144-279 (279)
119 TIGR01686 FkbH FkbH-like domai 99.3 7.6E-12 1.6E-16 125.0 9.1 90 377-473 32-125 (320)
120 PRK09484 3-deoxy-D-manno-octul 99.3 8.1E-12 1.7E-16 114.5 8.3 82 383-475 55-136 (183)
121 COG0241 HisB Histidinol phosph 99.3 3.4E-11 7.4E-16 107.8 11.9 103 376-480 31-151 (181)
122 PF13242 Hydrolase_like: HAD-h 99.3 1.4E-11 3E-16 95.5 6.9 69 431-500 2-75 (75)
123 COG0560 SerB Phosphoserine pho 99.2 1.2E-10 2.6E-15 108.8 13.8 101 375-479 76-188 (212)
124 TIGR01681 HAD-SF-IIIC HAD-supe 99.2 2.1E-11 4.5E-16 105.0 7.6 91 376-469 29-126 (128)
125 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.2 5.4E-12 1.2E-16 122.0 3.9 120 377-500 121-250 (257)
126 smart00577 CPDc catalytic doma 99.2 2.5E-11 5.4E-16 107.3 5.8 92 375-474 44-138 (148)
127 COG0647 NagD Predicted sugar p 99.1 3.5E-11 7.6E-16 115.1 5.1 120 378-500 135-261 (269)
128 TIGR01663 PNK-3'Pase polynucle 99.1 1.4E-10 3.1E-15 121.3 9.5 90 377-472 198-305 (526)
129 PF12689 Acid_PPase: Acid Phos 99.1 4.9E-10 1.1E-14 99.9 10.0 103 374-480 43-153 (169)
130 PRK11590 hypothetical protein; 99.1 1.4E-09 3E-14 102.2 13.3 100 375-475 94-200 (211)
131 PTZ00445 p36-lilke protein; Pr 99.1 7.9E-10 1.7E-14 100.2 10.0 104 376-480 75-207 (219)
132 TIGR01459 HAD-SF-IIA-hyp4 HAD- 99.0 2.5E-10 5.5E-15 109.6 5.2 97 378-478 140-241 (242)
133 KOG1615 Phosphoserine phosphat 99.0 6.7E-10 1.4E-14 98.0 6.3 119 374-498 86-219 (227)
134 PRK08238 hypothetical protein; 99.0 6.5E-09 1.4E-13 108.5 14.1 95 375-480 71-167 (479)
135 TIGR01544 HAD-SF-IE haloacid d 99.0 1.6E-08 3.5E-13 97.2 14.7 93 374-470 119-230 (277)
136 PF08645 PNK3P: Polynucleotide 98.9 3.1E-09 6.8E-14 94.7 7.6 93 377-475 30-153 (159)
137 PF06888 Put_Phosphatase: Puta 98.9 1.6E-08 3.6E-13 95.1 11.2 103 374-480 69-198 (234)
138 TIGR02244 HAD-IG-Ncltidse HAD 98.8 3.2E-08 6.9E-13 98.2 12.8 103 375-480 183-325 (343)
139 PF09419 PGP_phosphatase: Mito 98.8 2.9E-08 6.3E-13 88.3 9.8 93 377-480 60-166 (168)
140 TIGR01545 YfhB_g-proteo haloac 98.8 7.8E-08 1.7E-12 90.0 12.3 101 375-476 93-200 (210)
141 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.8 1.5E-08 3.3E-13 97.2 7.6 89 377-472 25-116 (242)
142 PRK10530 pyridoxal phosphate ( 98.7 5.3E-08 1.1E-12 95.1 10.7 113 378-497 139-258 (272)
143 TIGR01533 lipo_e_P4 5'-nucleot 98.7 1E-07 2.2E-12 91.7 12.0 85 374-467 116-204 (266)
144 PF12710 HAD: haloacid dehalog 98.7 8.1E-08 1.7E-12 88.5 10.8 88 379-468 92-192 (192)
145 COG1778 Low specificity phosph 98.7 2.3E-08 4.9E-13 85.6 4.9 84 384-478 43-126 (170)
146 KOG3040 Predicted sugar phosph 98.7 6.2E-09 1.3E-13 92.9 1.3 69 429-498 177-250 (262)
147 PRK01158 phosphoglycolate phos 98.5 3.4E-07 7.4E-12 87.1 9.7 82 395-478 118-200 (230)
148 TIGR01512 ATPase-IB2_Cd heavy 98.5 2.3E-07 5E-12 99.3 7.5 109 375-499 361-473 (536)
149 TIGR01525 ATPase-IB_hvy heavy 98.5 3.6E-07 7.8E-12 98.4 8.3 105 375-495 383-488 (556)
150 TIGR01684 viral_ppase viral ph 98.5 4.5E-07 9.8E-12 87.0 7.7 56 379-437 149-206 (301)
151 KOG3120 Predicted haloacid deh 98.4 4.3E-06 9.2E-11 75.8 12.1 102 374-479 82-210 (256)
152 TIGR01482 SPP-subfamily Sucros 98.4 7.9E-07 1.7E-11 84.2 7.0 83 394-478 109-192 (225)
153 PF06941 NT5C: 5' nucleotidase 98.3 3.7E-07 8E-12 84.3 4.2 107 372-499 69-180 (191)
154 TIGR02251 HIF-SF_euk Dullard-l 98.3 2.9E-07 6.3E-12 82.5 3.2 96 375-478 41-139 (162)
155 TIGR01511 ATPase-IB1_Cu copper 98.3 7.7E-07 1.7E-11 95.7 7.0 104 375-495 404-507 (562)
156 TIGR01460 HAD-SF-IIA Haloacid 98.3 5.1E-07 1.1E-11 86.3 5.0 50 430-480 185-236 (236)
157 TIGR01487 SPP-like sucrose-pho 98.2 3.7E-06 8E-11 79.1 8.1 81 394-478 109-190 (215)
158 PRK00192 mannosyl-3-phosphogly 98.2 1.3E-05 2.9E-10 78.3 12.2 90 386-480 142-236 (273)
159 KOG2882 p-Nitrophenyl phosphat 98.2 9.2E-07 2E-11 84.2 3.7 118 378-499 167-298 (306)
160 PHA03398 viral phosphatase sup 98.2 5.8E-06 1.3E-10 79.6 8.7 80 379-461 151-262 (303)
161 COG4996 Predicted phosphatase 98.2 3.3E-06 7.1E-11 69.9 5.5 87 374-469 39-134 (164)
162 COG4087 Soluble P-type ATPase 98.1 6E-06 1.3E-10 68.5 6.5 113 375-499 29-141 (152)
163 TIGR01456 CECR5 HAD-superfamil 98.1 3.4E-06 7.4E-11 84.4 6.2 70 431-500 231-316 (321)
164 PRK10671 copA copper exporting 98.0 8.8E-06 1.9E-10 91.9 7.7 86 376-474 650-735 (834)
165 PF05761 5_nucleotid: 5' nucle 97.9 0.00012 2.6E-09 75.6 12.2 103 375-480 182-326 (448)
166 COG4359 Uncharacterized conser 97.9 0.0001 2.2E-09 65.0 9.7 93 375-472 72-180 (220)
167 KOG3699 Cytoskeletal protein A 97.9 1.1E-05 2.3E-10 83.2 4.2 176 43-244 363-541 (598)
168 PF03767 Acid_phosphat_B: HAD 97.8 4.6E-05 9.9E-10 72.2 7.5 90 375-469 114-210 (229)
169 TIGR01522 ATPase-IIA2_Ca golgi 97.8 2.9E-05 6.2E-10 88.1 7.0 117 376-499 528-665 (884)
170 PF13344 Hydrolase_6: Haloacid 97.8 4.8E-05 1E-09 62.3 6.1 84 376-472 14-100 (101)
171 TIGR01485 SPP_plant-cyano sucr 97.8 0.00012 2.6E-09 70.6 9.9 53 427-480 160-212 (249)
172 PRK15126 thiamin pyrimidine py 97.8 0.00019 4.2E-09 70.0 10.8 43 435-478 189-231 (272)
173 smart00775 LNS2 LNS2 domain. T 97.7 0.00025 5.4E-09 63.1 10.0 96 377-474 28-142 (157)
174 TIGR01452 PGP_euk phosphoglyco 97.7 0.00034 7.4E-09 68.6 11.5 87 377-475 19-108 (279)
175 TIGR01675 plant-AP plant acid 97.7 0.0004 8.8E-09 65.2 10.9 97 374-477 118-221 (229)
176 COG0561 Cof Predicted hydrolas 97.6 0.00024 5.3E-09 69.0 9.3 49 430-479 185-233 (264)
177 PRK10513 sugar phosphate phosp 97.6 0.00058 1.3E-08 66.5 10.9 51 427-478 189-239 (270)
178 TIGR02471 sucr_syn_bact_C sucr 97.5 0.00043 9.4E-09 66.1 8.8 49 427-476 152-200 (236)
179 PRK11033 zntA zinc/cadmium/mer 97.5 0.00042 9.1E-09 77.1 9.4 84 376-476 568-653 (741)
180 PF11019 DUF2608: Protein of u 97.4 0.0048 1E-07 59.3 15.0 104 377-482 82-213 (252)
181 PRK03669 mannosyl-3-phosphogly 97.3 0.0063 1.4E-07 59.4 14.9 51 427-478 180-233 (271)
182 TIGR01116 ATPase-IIA1_Ca sarco 97.3 0.00062 1.4E-08 77.6 8.0 118 375-496 536-672 (917)
183 COG5663 Uncharacterized conser 97.2 0.00081 1.8E-08 58.5 6.3 95 376-485 72-168 (194)
184 TIGR01680 Veg_Stor_Prot vegeta 97.2 0.0017 3.8E-08 62.0 9.2 102 374-480 143-251 (275)
185 COG3700 AphA Acid phosphatase 97.2 0.0017 3.8E-08 57.0 7.7 91 381-480 119-213 (237)
186 PLN02645 phosphoglycolate phos 97.1 0.0037 8.1E-08 62.3 10.2 89 377-476 45-136 (311)
187 KOG2961 Predicted hydrolase (H 97.0 0.0099 2.2E-07 51.0 10.2 47 435-481 123-170 (190)
188 COG3882 FkbH Predicted enzyme 96.8 0.011 2.5E-07 60.1 11.1 90 377-472 256-348 (574)
189 TIGR02250 FCP1_euk FCP1-like p 96.7 0.0032 7E-08 55.9 6.0 78 374-462 56-138 (156)
190 TIGR01497 kdpB K+-transporting 96.7 0.0058 1.3E-07 66.6 8.7 88 376-476 446-533 (675)
191 TIGR01458 HAD-SF-IIA-hyp3 HAD- 96.6 0.0024 5.2E-08 61.8 4.6 39 377-415 22-63 (257)
192 PRK14010 potassium-transportin 96.6 0.0088 1.9E-07 65.3 9.4 88 376-476 441-528 (673)
193 COG2217 ZntA Cation transport 96.5 0.0087 1.9E-07 65.5 8.6 87 376-475 537-623 (713)
194 PRK01122 potassium-transportin 96.5 0.01 2.2E-07 64.9 9.1 89 376-477 445-533 (679)
195 COG2503 Predicted secreted aci 96.5 0.0082 1.8E-07 55.7 7.0 85 374-466 120-208 (274)
196 TIGR02463 MPGP_rel mannosyl-3- 96.5 0.011 2.3E-07 55.7 8.1 40 435-475 180-219 (221)
197 PF08235 LNS2: LNS2 (Lipin/Ned 96.4 0.027 5.8E-07 49.6 9.7 100 377-479 28-149 (157)
198 PTZ00174 phosphomannomutase; P 96.4 0.0068 1.5E-07 58.3 6.6 16 281-296 2-17 (247)
199 PRK10976 putative hydrolase; P 96.4 0.0075 1.6E-07 58.5 6.5 43 436-479 192-234 (266)
200 PRK12702 mannosyl-3-phosphogly 96.3 0.0083 1.8E-07 58.2 6.3 34 381-414 23-56 (302)
201 PRK14502 bifunctional mannosyl 96.2 0.13 2.7E-06 55.8 14.7 46 432-478 611-658 (694)
202 TIGR01689 EcbF-BcbF capsule bi 96.1 0.022 4.8E-07 48.4 7.3 31 377-407 25-55 (126)
203 TIGR01460 HAD-SF-IIA Haloacid 96.1 0.016 3.5E-07 55.2 7.4 27 377-403 15-41 (236)
204 TIGR01658 EYA-cons_domain eyes 96.1 0.12 2.5E-06 48.4 12.2 44 435-479 215-258 (274)
205 PF05116 S6PP: Sucrose-6F-phos 96.0 0.013 2.8E-07 56.4 5.8 45 434-480 165-209 (247)
206 TIGR01647 ATPase-IIIA_H plasma 96.0 0.018 3.9E-07 64.4 7.8 100 376-476 442-559 (755)
207 KOG2470 Similar to IMP-GMP spe 95.9 0.011 2.4E-07 57.5 4.9 102 377-479 241-376 (510)
208 PLN02382 probable sucrose-phos 95.9 0.079 1.7E-06 54.9 11.4 47 432-479 173-222 (413)
209 KOG2882 p-Nitrophenyl phosphat 95.9 0.032 6.9E-07 53.8 7.8 96 377-480 39-134 (306)
210 PLN02887 hydrolase family prot 95.8 0.037 7.9E-07 59.6 8.8 36 442-478 515-550 (580)
211 PRK10517 magnesium-transportin 95.6 0.028 6E-07 64.1 7.6 99 376-476 550-662 (902)
212 TIGR02461 osmo_MPG_phos mannos 95.6 0.023 5E-07 53.8 5.9 35 380-414 19-53 (225)
213 TIGR01524 ATPase-IIIB_Mg magne 95.5 0.032 6.9E-07 63.4 7.7 100 376-477 515-628 (867)
214 PF05152 DUF705: Protein of un 95.5 0.08 1.7E-06 50.7 8.9 82 377-461 143-256 (297)
215 TIGR01456 CECR5 HAD-superfamil 95.5 0.069 1.5E-06 53.5 9.0 85 377-476 17-109 (321)
216 TIGR00099 Cof-subfamily Cof su 95.5 0.028 6.1E-07 54.2 6.0 40 437-477 191-230 (256)
217 TIGR00685 T6PP trehalose-phosp 95.3 0.023 5E-07 54.5 4.9 60 435-499 168-234 (244)
218 TIGR01484 HAD-SF-IIB HAD-super 95.3 0.025 5.4E-07 52.4 4.9 48 427-475 156-203 (204)
219 TIGR01517 ATPase-IIB_Ca plasma 95.3 0.048 1E-06 62.7 8.1 101 375-476 578-693 (941)
220 PRK15122 magnesium-transportin 95.3 0.052 1.1E-06 61.9 8.3 98 376-475 550-661 (903)
221 COG4030 Uncharacterized protei 95.2 0.34 7.4E-06 44.7 11.5 41 374-415 81-121 (315)
222 PF08282 Hydrolase_3: haloacid 95.1 0.038 8.2E-07 52.5 5.7 42 435-477 187-228 (254)
223 TIGR02463 MPGP_rel mannosyl-3- 95.0 0.044 9.4E-07 51.6 5.8 34 381-414 21-54 (221)
224 TIGR02245 HAD_IIID1 HAD-superf 94.9 0.25 5.4E-06 45.4 10.0 37 377-414 46-82 (195)
225 TIGR01523 ATPase-IID_K-Na pota 94.7 0.09 2E-06 60.9 8.3 100 375-475 645-769 (1053)
226 COG0647 NagD Predicted sugar p 94.6 0.081 1.8E-06 51.1 6.4 105 376-480 24-157 (269)
227 PLN02177 glycerol-3-phosphate 94.6 0.21 4.6E-06 52.8 10.0 88 384-474 115-211 (497)
228 KOG0207 Cation transport ATPas 94.5 0.13 2.7E-06 56.7 8.1 87 376-477 723-811 (951)
229 COG0474 MgtA Cation transport 94.4 0.11 2.3E-06 59.6 7.9 103 375-478 546-665 (917)
230 TIGR01494 ATPase_P-type ATPase 94.2 0.19 4.2E-06 53.5 9.0 82 376-473 347-428 (499)
231 TIGR01486 HAD-SF-IIB-MPGP mann 94.2 0.096 2.1E-06 50.5 6.0 44 435-479 177-222 (256)
232 TIGR01484 HAD-SF-IIB HAD-super 94.2 0.085 1.8E-06 48.8 5.4 35 379-413 20-54 (204)
233 TIGR01106 ATPase-IIC_X-K sodiu 93.8 0.14 3E-06 59.3 7.2 101 375-476 567-708 (997)
234 TIGR01657 P-ATPase-V P-type AT 93.4 0.3 6.4E-06 57.0 9.2 41 375-415 655-695 (1054)
235 TIGR00099 Cof-subfamily Cof su 93.4 0.11 2.3E-06 50.1 4.8 14 87-100 1-14 (256)
236 PRK10187 trehalose-6-phosphate 93.2 0.17 3.8E-06 49.1 5.9 42 435-477 175-219 (266)
237 PRK10976 putative hydrolase; P 92.9 0.1 2.2E-06 50.5 3.8 12 285-296 3-14 (266)
238 KOG0202 Ca2+ transporting ATPa 92.6 0.39 8.5E-06 52.5 7.8 100 376-476 584-702 (972)
239 PLN02423 phosphomannomutase 92.5 0.25 5.4E-06 47.4 5.9 30 451-480 200-233 (245)
240 COG3769 Predicted hydrolase (H 92.4 0.48 1E-05 43.7 7.0 35 382-416 29-63 (274)
241 PF03031 NIF: NLI interacting 92.3 0.088 1.9E-06 46.7 2.3 82 375-464 35-119 (159)
242 KOG2134 Polynucleotide kinase 91.7 0.42 9.1E-06 47.7 6.3 98 377-475 105-230 (422)
243 COG2216 KdpB High-affinity K+ 91.1 0.63 1.4E-05 48.2 7.0 85 376-473 447-531 (681)
244 COG5610 Predicted hydrolase (H 90.5 0.69 1.5E-05 47.1 6.6 99 375-477 96-201 (635)
245 TIGR01486 HAD-SF-IIB-MPGP mann 89.7 0.89 1.9E-05 43.8 6.7 9 89-97 3-11 (256)
246 PF08282 Hydrolase_3: haloacid 89.7 0.4 8.7E-06 45.3 4.2 21 380-400 83-103 (254)
247 TIGR02461 osmo_MPG_phos mannos 89.6 0.52 1.1E-05 44.6 4.8 40 435-475 182-223 (225)
248 PLN03017 trehalose-phosphatase 89.4 0.66 1.4E-05 46.9 5.6 43 453-499 304-350 (366)
249 PLN02499 glycerol-3-phosphate 89.2 2.9 6.3E-05 43.8 10.2 91 384-479 101-198 (498)
250 PLN02887 hydrolase family prot 89.1 0.49 1.1E-05 51.1 4.7 18 281-298 305-322 (580)
251 TIGR01652 ATPase-Plipid phosph 88.9 1.1 2.3E-05 52.5 7.7 40 376-415 631-670 (1057)
252 PLN02580 trehalose-phosphatase 88.5 0.75 1.6E-05 46.8 5.3 35 377-412 142-176 (384)
253 TIGR01457 HAD-SF-IIA-hyp2 HAD- 88.2 2.6 5.7E-05 40.4 8.7 101 377-480 18-145 (249)
254 PLN02205 alpha,alpha-trehalose 87.8 1.3 2.8E-05 50.2 7.1 36 435-471 763-801 (854)
255 PLN02151 trehalose-phosphatase 87.7 0.9 1.9E-05 45.7 5.2 42 454-499 291-336 (354)
256 PLN03190 aminophospholipid tra 85.6 1.4 3.1E-05 51.7 6.2 36 376-411 726-761 (1178)
257 PRK14501 putative bifunctional 85.5 1.5 3.2E-05 49.1 6.1 48 447-499 668-715 (726)
258 COG5083 SMP2 Uncharacterized p 84.6 3 6.5E-05 42.4 6.9 44 429-474 470-517 (580)
259 PRK10187 trehalose-6-phosphate 84.5 1.7 3.6E-05 42.3 5.2 14 285-298 15-28 (266)
260 KOG2116 Protein involved in pl 84.1 2.3 5.1E-05 45.4 6.2 100 380-480 562-681 (738)
261 COG1877 OtsB Trehalose-6-phosp 83.7 2.6 5.6E-05 40.7 6.0 35 377-411 41-76 (266)
262 KOG2469 IMP-GMP specific 5'-nu 83.0 1.9 4.1E-05 43.5 4.8 100 378-480 200-335 (424)
263 PF06189 5-nucleotidase: 5'-nu 82.5 6.4 0.00014 37.6 7.9 72 392-480 186-260 (264)
264 PRK10444 UMP phosphatase; Prov 81.3 1.2 2.5E-05 42.9 2.7 36 377-412 18-53 (248)
265 PRK11840 bifunctional sulfur c 81.0 16 0.00035 36.2 10.4 97 376-480 178-280 (326)
266 TIGR01681 HAD-SF-IIIC HAD-supe 80.7 0.89 1.9E-05 38.7 1.5 14 285-298 1-14 (128)
267 cd04728 ThiG Thiazole synthase 80.1 28 0.0006 33.1 11.2 97 376-480 104-206 (248)
268 PRK00192 mannosyl-3-phosphogly 77.8 3.1 6.7E-05 40.4 4.5 38 377-414 22-59 (273)
269 KOG4549 Magnesium-dependent ph 75.7 14 0.00031 31.1 7.0 86 376-462 44-133 (144)
270 KOG0209 P-type ATPase [Inorgan 75.4 10 0.00022 42.0 7.7 40 375-414 674-713 (1160)
271 PF05822 UMPH-1: Pyrimidine 5' 74.4 4.1 8.9E-05 38.7 4.1 97 374-470 88-198 (246)
272 PRK00208 thiG thiazole synthas 74.0 52 0.0011 31.3 11.2 97 376-480 104-206 (250)
273 COG4850 Uncharacterized conser 73.1 16 0.00034 36.1 7.6 88 374-466 194-293 (373)
274 COG0731 Fe-S oxidoreductases [ 71.1 7.3 0.00016 38.1 5.1 103 374-480 90-212 (296)
275 PF05690 ThiG: Thiazole biosyn 71.0 42 0.00092 31.7 9.7 97 376-480 104-206 (247)
276 PLN03063 alpha,alpha-trehalose 70.4 8.6 0.00019 43.5 6.2 36 377-412 533-569 (797)
277 PF02358 Trehalose_PPase: Treh 70.2 4.9 0.00011 38.1 3.7 39 435-473 166-206 (235)
278 PF03031 NIF: NLI interacting 67.5 3.1 6.7E-05 36.7 1.6 16 285-300 1-16 (159)
279 PLN03064 alpha,alpha-trehalose 66.4 12 0.00026 42.8 6.2 38 376-413 622-660 (934)
280 TIGR01487 SPP-like sucrose-pho 66.3 7.4 0.00016 36.1 4.0 38 377-414 19-56 (215)
281 COG4502 5'(3')-deoxyribonucleo 66.3 5.7 0.00012 34.0 2.8 39 374-413 66-106 (180)
282 KOG0204 Calcium transporting A 65.8 19 0.00041 40.1 7.2 97 375-476 646-763 (1034)
283 CHL00162 thiG thiamin biosynth 65.0 65 0.0014 30.8 9.8 97 376-480 118-220 (267)
284 KOG1618 Predicted phosphatase 64.6 4.8 0.0001 39.4 2.3 50 431-480 269-342 (389)
285 KOG3040 Predicted sugar phosph 63.6 19 0.00041 33.2 5.7 37 377-413 24-60 (262)
286 PRK01158 phosphoglycolate phos 62.5 10 0.00023 35.4 4.3 38 378-415 22-59 (230)
287 PF14226 DIOX_N: non-haem diox 61.4 6.9 0.00015 32.3 2.5 36 174-212 1-39 (116)
288 TIGR00685 T6PP trehalose-phosp 59.7 5.1 0.00011 38.2 1.6 16 284-299 3-18 (244)
289 PRK08324 short chain dehydroge 59.4 17 0.00037 40.4 5.9 52 198-249 345-396 (681)
290 PRK10513 sugar phosphate phosp 58.6 14 0.00031 35.5 4.5 37 379-415 23-59 (270)
291 TIGR01482 SPP-subfamily Sucros 58.4 14 0.00031 34.3 4.4 37 378-414 17-53 (225)
292 PRK10530 pyridoxal phosphate ( 58.4 15 0.00033 35.3 4.7 38 377-414 21-58 (272)
293 KOG3128 Uncharacterized conser 56.4 25 0.00054 33.5 5.4 92 376-469 138-246 (298)
294 COG2022 ThiG Uncharacterized e 56.2 1.2E+02 0.0025 28.7 9.6 97 376-480 111-213 (262)
295 KOG3107 Predicted haloacid deh 56.0 65 0.0014 32.6 8.4 43 435-479 410-452 (468)
296 KOG0323 TFIIF-interacting CTD 55.4 15 0.00032 39.9 4.3 79 374-461 199-280 (635)
297 COG0561 Cof Predicted hydrolas 55.2 15 0.00033 35.2 4.1 65 379-446 23-95 (264)
298 PRK03669 mannosyl-3-phosphogly 53.8 17 0.00036 35.2 4.1 37 379-415 27-63 (271)
299 TIGR02632 RhaD_aldol-ADH rhamn 50.0 27 0.00058 38.9 5.5 54 198-251 337-390 (676)
300 COG3347 Uncharacterized conser 47.8 64 0.0014 32.6 7.0 54 198-251 336-389 (404)
301 TIGR02244 HAD-IG-Ncltidse HAD 47.1 15 0.00032 37.1 2.6 21 280-300 8-28 (343)
302 PF04413 Glycos_transf_N: 3-De 46.3 90 0.0019 28.4 7.5 87 381-480 37-127 (186)
303 PF13580 SIS_2: SIS domain; PD 44.9 2E+02 0.0043 24.5 9.1 99 379-478 22-137 (138)
304 PLN02580 trehalose-phosphatase 44.6 38 0.00082 34.7 5.1 60 434-499 301-368 (384)
305 PRK14501 putative bifunctional 44.6 26 0.00056 39.3 4.3 16 283-298 491-506 (726)
306 PLN02423 phosphomannomutase 42.8 24 0.00053 33.6 3.3 17 283-299 5-22 (245)
307 PHA02575 1 deoxynucleoside mon 41.1 1.4E+02 0.0031 28.1 7.9 70 399-481 113-187 (227)
308 PF06901 FrpC: RTX iron-regula 40.6 35 0.00075 30.9 3.6 14 284-297 58-71 (271)
309 TIGR00221 nagA N-acetylglucosa 38.8 1.7E+02 0.0038 29.9 9.0 37 376-412 174-211 (380)
310 COG1015 DeoB Phosphopentomutas 36.9 1.5E+02 0.0032 30.0 7.6 87 376-463 221-337 (397)
311 PF03332 PMM: Eukaryotic phosp 35.2 42 0.00092 31.3 3.4 51 27-91 124-182 (220)
312 KOG0210 P-type ATPase [Inorgan 34.8 49 0.0011 36.2 4.2 34 376-409 658-691 (1051)
313 PF03681 UPF0150: Uncharacteri 34.3 42 0.00092 22.8 2.6 17 209-225 23-39 (48)
314 KOG3189 Phosphomannomutase [Li 33.7 23 0.00051 32.4 1.4 11 286-296 13-23 (252)
315 TIGR02251 HIF-SF_euk Dullard-l 33.6 26 0.00055 31.1 1.7 16 285-300 2-17 (162)
316 PLN02334 ribulose-phosphate 3- 33.5 4E+02 0.0088 24.9 10.3 98 379-480 102-204 (229)
317 PLN02704 flavonol synthase 33.5 63 0.0014 32.4 4.7 36 173-211 42-78 (335)
318 PF04413 Glycos_transf_N: 3-De 33.3 34 0.00074 31.2 2.5 82 375-465 104-185 (186)
319 smart00540 LEM in nuclear memb 31.9 35 0.00077 23.1 1.7 32 382-413 9-40 (44)
320 TIGR03470 HpnH hopanoid biosyn 31.7 3E+02 0.0066 27.3 9.2 27 377-403 85-111 (318)
321 PLN02997 flavonol synthase 31.3 58 0.0013 32.6 4.0 36 173-211 32-68 (325)
322 PRK00994 F420-dependent methyl 30.9 4.6E+02 0.0099 24.9 9.3 91 384-480 22-118 (277)
323 PRK13762 tRNA-modifying enzyme 30.8 56 0.0012 32.6 3.8 29 376-404 142-170 (322)
324 TIGR03365 Bsubt_queE 7-cyano-7 30.5 43 0.00094 31.8 2.8 28 378-405 86-113 (238)
325 PRK06552 keto-hydroxyglutarate 29.7 3.4E+02 0.0075 25.2 8.6 86 383-477 5-94 (213)
326 PLN02205 alpha,alpha-trehalose 29.3 73 0.0016 36.4 4.8 17 283-299 595-611 (854)
327 TIGR01485 SPP_plant-cyano sucr 28.8 66 0.0014 30.5 3.8 36 379-414 24-59 (249)
328 PLN03176 flavanone-3-hydroxyla 28.5 1.1E+02 0.0024 25.6 4.7 36 174-212 38-79 (120)
329 PF06506 PrpR_N: Propionate ca 28.0 90 0.0019 28.0 4.3 88 376-480 58-152 (176)
330 PRK13125 trpA tryptophan synth 27.5 4.9E+02 0.011 24.6 9.5 95 379-479 116-215 (244)
331 TIGR02329 propionate_PrpR prop 27.4 2E+02 0.0043 31.0 7.4 86 381-480 86-172 (526)
332 PTZ00174 phosphomannomutase; P 27.0 63 0.0014 30.7 3.3 41 433-478 187-231 (247)
333 PF05761 5_nucleotid: 5' nucle 26.8 52 0.0011 34.5 2.9 19 281-299 9-27 (448)
334 PLN02639 oxidoreductase, 2OG-F 26.7 73 0.0016 32.0 3.9 36 173-211 37-73 (337)
335 PRK10076 pyruvate formate lyas 26.7 1E+02 0.0022 28.8 4.5 36 378-413 52-90 (213)
336 TIGR02826 RNR_activ_nrdG3 anae 26.7 79 0.0017 27.6 3.6 25 379-403 75-99 (147)
337 smart00052 EAL Putative diguan 26.6 3.6E+02 0.0078 24.7 8.5 90 381-478 135-231 (241)
338 KOG0207 Cation transport ATPas 26.2 1.7E+02 0.0038 33.2 6.7 44 432-478 724-768 (951)
339 PRK14502 bifunctional mannosyl 26.0 85 0.0019 34.6 4.3 36 379-414 436-471 (694)
340 KOG1618 Predicted phosphatase 25.8 1.1E+02 0.0023 30.4 4.5 87 377-476 52-144 (389)
341 PRK08649 inosine 5-monophospha 25.4 7E+02 0.015 25.4 10.6 91 381-480 120-217 (368)
342 cd00956 Transaldolase_FSA Tran 25.2 4.7E+02 0.01 24.3 8.7 102 372-480 81-187 (211)
343 PRK15424 propionate catabolism 23.5 2.6E+02 0.0056 30.2 7.4 85 381-479 96-181 (538)
344 PLN02485 oxidoreductase 23.3 1E+02 0.0022 30.9 4.1 35 185-224 33-67 (329)
345 KOG1679 Enoyl-CoA hydratase [L 23.3 97 0.0021 28.8 3.5 33 190-222 66-100 (291)
346 PRK05301 pyrroloquinoline quin 22.8 2.9E+02 0.0063 28.0 7.5 26 377-402 75-100 (378)
347 COG2019 AdkA Archaeal adenylat 22.7 58 0.0013 29.2 1.9 90 27-124 61-151 (189)
348 PRK11070 ssDNA exonuclease Rec 22.3 9.2E+02 0.02 26.3 11.3 98 376-479 50-159 (575)
349 PRK05718 keto-hydroxyglutarate 21.0 5.6E+02 0.012 23.8 8.3 84 383-479 7-95 (212)
350 PLN02393 leucoanthocyanidin di 20.8 1.4E+02 0.0031 30.3 4.6 35 173-210 51-92 (362)
351 cd01948 EAL EAL domain. This d 20.7 5.1E+02 0.011 23.7 8.3 90 381-478 134-230 (240)
352 TIGR03590 PseG pseudaminic aci 20.1 7.9E+02 0.017 23.7 11.1 31 383-413 22-52 (279)
No 1
>PRK06833 L-fuculose phosphate aldolase; Provisional
Probab=100.00 E-value=4e-45 Score=342.15 Aligned_cols=201 Identities=22% Similarity=0.322 Sum_probs=175.2
Q ss_pred cHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCC
Q 010820 26 AVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPY 105 (500)
Q Consensus 26 ~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~ 105 (500)
..+++|++|+++||+++++||+.+++||||+|++++ +.|||||||.++++|+++||++||++|++++|. .+|
T Consensus 2 ~~~~~r~~i~~~~~~l~~~gl~~g~~GniS~r~~~~------~~~~ItpsG~~~~~l~~~div~vd~~g~~i~g~-~~p- 73 (214)
T PRK06833 2 LLQKEREEIVAYGKKLISSGLTKGTGGNISIFNREQ------GLMAITPSGIDYFEIKPEDIVIMDLDGKVVEGE-RKP- 73 (214)
T ss_pred chHHHHHHHHHHHHHHHHcCCCCCCCceEEEEeCCC------CEEEEcCCCCChhhCCHHHEEEEcCCCCCcCCC-CCC-
Confidence 356789999999999999999999999999999763 489999999999999999999999999999986 355
Q ss_pred CCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCC-CCc
Q 010820 106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYE 183 (500)
Q Consensus 106 ~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~-~~~ 183 (500)
|+|+.||++|||+| |++||+|+||+|+++||+.+. ++|...+... .+++ .||+.+|. +++
T Consensus 74 -------s~E~~lH~~iy~~rpdv~aVvH~H~~~a~a~s~~~~---~lp~~~~~~~-~~~~-------~i~~~~y~~~gs 135 (214)
T PRK06833 74 -------SSELDMHLIFYRNREDINAIVHTHSPYATTLACLGW---ELPAVHYLIA-VAGP-------NVRCAEYATFGT 135 (214)
T ss_pred -------CccHHHHHHHHHhCCCCCEEEEeCcHHHHHHHHcCC---CCCcchhHHH-HHCC-------CeeeccCCCCCh
Confidence 89999999999999 999999999999999999975 3544333322 2222 38999885 699
Q ss_pred hhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccccc
Q 010820 184 NELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFK 256 (500)
Q Consensus 184 ~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~ 256 (500)
.++++.++++|+++ ++|||+|||+++||+|+++||.+++++|++|++++.++++|.+..+ ++++++++.
T Consensus 136 ~~la~~v~~~l~~~---~~vll~nHGv~~~G~~~~eA~~~~e~lE~~a~~~~~a~~~G~~~~l-~~~~~~~~~ 204 (214)
T PRK06833 136 KELAENAFEAMEDR---RAVLLANHGLLAGANNLKNAFNIAEEIEFCAEIYYQTKSIGEPKLL-PEDEMENMA 204 (214)
T ss_pred HHHHHHHHHHhCcC---CEEEECCCCCEEEeCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC-CHHHHHHHH
Confidence 99999999999874 9999999999999999999999999999999999999999988775 444665543
No 2
>PRK05874 L-fuculose-phosphate aldolase; Validated
Probab=100.00 E-value=3.9e-45 Score=341.07 Aligned_cols=201 Identities=22% Similarity=0.293 Sum_probs=174.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCC-CCCCC
Q 010820 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSP-SPKPY 105 (500)
Q Consensus 27 ~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~-~~~p~ 105 (500)
.+..|++|+++||+++++||+.+++||||+|++++ .|||||||+++++|+++||++||++|+++++. +.+|
T Consensus 4 ~~~~r~~i~~~~~~l~~~Gl~~g~~GNiS~R~~~~-------~~lITPsg~~~~~l~~~Div~vd~~G~~i~~~~~~kP- 75 (217)
T PRK05874 4 VDDPESAVLAAAKDMLRRGLVEGTAGNISARRSDG-------NVVITPSSVDYAEMLLHDLVLVDAGGAVLHAKDGRSP- 75 (217)
T ss_pred hHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCCC-------CEEEeCCCCChhhCCHHHEEEEcCCCCEecCCCCCCC-
Confidence 45679999999999999999999999999999874 79999999999999999999999999999753 2345
Q ss_pred CCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCC-CCc
Q 010820 106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYE 183 (500)
Q Consensus 106 ~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~-~~~ 183 (500)
|+|+.||+.|||.| |++||+|+||+|+++||+.+. ++|....+....++| .+|+.+|. +++
T Consensus 76 -------ssE~~~H~~iY~~rpdv~aViHtH~~~a~a~s~~~~---~l~~~~~~~~~~~~~-------~v~~~~y~~~gs 138 (217)
T PRK05874 76 -------STELNLHLACYRAFDDIGSVIHSHPVWATMFAVAHE---PIPACIDEFAIYCGG-------DVRCTEYAASGT 138 (217)
T ss_pred -------chhHHHHHHHHHhCCCCCEEEECCcHHHHHHHHcCC---CCCcchhHHHHHcCC-------ceeeecCCCCCc
Confidence 89999999999999 999999999999999999875 344322222222223 39999995 689
Q ss_pred hhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccccc
Q 010820 184 NELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFK 256 (500)
Q Consensus 184 ~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~ 256 (500)
.+++++++++|+++ ++|||+|||+++||+|+++|+.+++.+|++|++++.++++|.+.++++ +++++..
T Consensus 139 ~ela~~v~~~l~~~---~~vlL~nHGv~~~G~~l~~A~~~~e~lE~~a~~~~~a~~~G~~~~l~~-e~~~~~~ 207 (217)
T PRK05874 139 PEVGRNAVRALEGR---AAALIANHGLVAVGPRPDQVLRVTALVERTAQIVWGARALGGPVPIPE-DVCRNFT 207 (217)
T ss_pred HHHHHHHHHHhCcC---CEEEEcCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCH-HHHHHhh
Confidence 99999999999974 999999999999999999999999999999999999999998877644 5777665
No 3
>PRK08087 L-fuculose phosphate aldolase; Provisional
Probab=100.00 E-value=5.7e-45 Score=341.08 Aligned_cols=201 Identities=22% Similarity=0.317 Sum_probs=174.6
Q ss_pred ccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCC
Q 010820 25 RAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKP 104 (500)
Q Consensus 25 ~~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p 104 (500)
|..+++|++|+++||+++++||+.+++||||+|+++ .|||||||.++++|+++||++||++|++++|. +|
T Consensus 1 ~~~~~~~~~l~~~~r~l~~~Gl~~~~~GNiS~R~~~--------~~lItpsG~~~~~l~~~di~~vd~~G~~~~g~--~p 70 (215)
T PRK08087 1 MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQD--------GMLITPTGIPYEKLTESHIVFVDGNGKHEEGK--LP 70 (215)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEcCC--------CEEEeCCCCChhhCCHHHEEEECCCCCCCCCC--CC
Confidence 457889999999999999999999999999999976 69999999999999999999999999999874 56
Q ss_pred CCCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeC-CCC
Q 010820 105 YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIEN-TAY 182 (500)
Q Consensus 105 ~~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~-~~~ 182 (500)
|+|+.||+.|||.| |++||+|+||+|++++|+... ++|....... .+++ ..||+++| .++
T Consensus 71 --------s~E~~lH~~iy~~rpdv~aViH~H~~~~~a~s~~~~---~ip~~~~~~~-~~~~------~~v~~~~y~~~g 132 (215)
T PRK08087 71 --------SSEWRFHMAAYQTRPDANAVVHNHAVHCTAVSILNR---PIPAIHYMIA-AAGG------NSIPCAPYATFG 132 (215)
T ss_pred --------ChhHHHHHHHHHhCCCCCEEEecCcHHHHHHHHcCC---CCCcHHHHHH-HHcC------CCceeecCCCCC
Confidence 89999999999999 999999999999999999875 3443332222 1211 13999998 469
Q ss_pred chhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccccc
Q 010820 183 ENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFK 256 (500)
Q Consensus 183 ~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~ 256 (500)
+.++++.++++|+++ +++||+|||+++||+|+++|+.+++++|++|++++.++++|.+....++++++++.
T Consensus 133 s~~la~~~~~~l~~~---~~vLl~nHGv~~~G~~~~~A~~~~e~lE~~a~~~~~a~~~g~~~~~l~~e~~~~~~ 203 (215)
T PRK08087 133 TRELSEHVALALKNR---KATLLQHHGLIACEVNLEKALWLAHEVEVLAQLYLKTLAITDPVPVLSDEEIAVVL 203 (215)
T ss_pred CHHHHHHHHHHhCcC---CEEEecCCCCEEEcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 999999999999874 99999999999999999999999999999999999999999775445666776664
No 4
>PRK08193 araD L-ribulose-5-phosphate 4-epimerase; Reviewed
Probab=100.00 E-value=7.3e-44 Score=336.72 Aligned_cols=204 Identities=20% Similarity=0.281 Sum_probs=170.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCCC
Q 010820 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYP 106 (500)
Q Consensus 27 ~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~~ 106 (500)
++++|++|+++||+|+++||+.+++||||+|++++ +.|||||||.++++|+++||++||++|++++|. .+|
T Consensus 2 ~~~~r~~i~~~~~~l~~~gl~~g~~GNiS~r~~~~------~~~~ItpsG~~~~~l~~~Div~vd~dG~~~~g~-~kP-- 72 (231)
T PRK08193 2 LEDLKQEVLEANLALPKHGLVTFTWGNVSAIDRER------GLFVIKPSGVDYDKMTAEDMVVVDLEGNVVEGK-LKP-- 72 (231)
T ss_pred hHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEecCC------CEEEEeCCCCChhhCChHHEEEECCCCCCCCCC-CCc--
Confidence 56799999999999999999999999999998663 379999999999999999999999999999986 456
Q ss_pred CCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCCC----
Q 010820 107 HKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTA---- 181 (500)
Q Consensus 107 ~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~~---- 181 (500)
|+|+.||+.|||+| |++||+|+||||+++||+.+.. +|.........+.| .||++||.+
T Consensus 73 ------SsE~~~H~~IYr~rpdv~AVvHtHsp~ata~s~~~~~---l~~~~~~~~~~~~~-------~ip~~~~~~~~~~ 136 (231)
T PRK08193 73 ------SSDTPTHLVLYKAFPEIGGIVHTHSRHATAWAQAGRD---IPALGTTHADYFYG-------DIPCTRKMTDEEI 136 (231)
T ss_pred ------CccHHHHHHHHHhCCCCcEEEecCcHHHHHHHhcCCC---CCcchHHHHHHhCC-------CcceecCCCcccc
Confidence 99999999999999 9999999999999999998643 43322211112223 399998743
Q ss_pred ---CchhHHHHHHHHHhhC----CCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccc
Q 010820 182 ---YENELTDSLAKAIDAY----PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRN 254 (500)
Q Consensus 182 ---~~~~l~~~v~~~l~~~----~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~ 254 (500)
+..++++.+++.|+++ ++.+++||+|||+++||+|+++|+.+++.+|++|++++.++++|.+....+++++++
T Consensus 137 ~~~~~~~~~~~ia~~l~~~~~~~~~~~avLl~nHG~v~~G~~l~eA~~~~e~lE~~a~~~~~a~~lg~~~~~l~~e~~~~ 216 (231)
T PRK08193 137 NGEYEWETGKVIVETFEKRGIDPAAVPGVLVHSHGPFTWGKDAEDAVHNAVVLEEVAKMAYFTRQLNPQLPDMQQTLLDK 216 (231)
T ss_pred cccchhhHHHHHHHHHhhccCCcccCCEEEEcCCCceEecCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCHHHHHH
Confidence 3457899999999863 245899999999999999999999999999999999999999994443344446554
Q ss_pred c
Q 010820 255 F 255 (500)
Q Consensus 255 ~ 255 (500)
.
T Consensus 217 ~ 217 (231)
T PRK08193 217 H 217 (231)
T ss_pred H
Confidence 4
No 5
>PRK13213 araD L-ribulose-5-phosphate 4-epimerase; Reviewed
Probab=100.00 E-value=1e-43 Score=332.37 Aligned_cols=202 Identities=19% Similarity=0.233 Sum_probs=169.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCC-CCcccCCCCCCC
Q 010820 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN-GTTLSSPSPKPY 105 (500)
Q Consensus 27 ~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~-g~~~~g~~~~p~ 105 (500)
++++|++|+++||+|+++||+.+++||||+|++++ +.|+|||||+++++|+++||++||++ |++++|. .+|
T Consensus 2 ~~~~r~evv~~~~~l~~~gl~~gt~GNiS~r~~~~------~~~~ITpsg~~~~~l~~~div~vd~~~g~~~~g~-~kP- 73 (231)
T PRK13213 2 LEQLKQQVFEANLALPKYKLVTFTWGNVSGIDREH------GLVVIKPSGVEYDVMSVNDMVVVDLATGKVVEGD-KKP- 73 (231)
T ss_pred hHHHHHHHHHHHHHHHHCCCCCCCcceEEEEECCC------CEEEEECCCCCcccCCHHHEEEEEcCCCCCcCCC-CCc-
Confidence 56789999999999999999999999999998653 38999999999999999999999995 9999986 466
Q ss_pred CCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCCC---
Q 010820 106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTA--- 181 (500)
Q Consensus 106 ~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~~--- 181 (500)
|+|+.||+.|||.| |++||||+||+|+++||+.+.+ +|.........+.| .||+.+|.+
T Consensus 74 -------SsE~~lH~~iY~~rpdv~AViHtHs~~at~~a~~~~~---lp~~~~~~~~~~~g-------~Ip~~~~~~~~~ 136 (231)
T PRK13213 74 -------SSDTDTHLVLYRAFAEIGGIVHTHSRHATIWAQAGKS---LSALGTTHADYFYG-------PIPCTRLMTEAE 136 (231)
T ss_pred -------CccHHHHHHHHHhCCCCCEEEEcCCHHHHHHHHcCCC---CCCcchHHHHHhCC-------Ccceeecccccc
Confidence 99999999999999 9999999999999999999753 44322222222333 389988853
Q ss_pred --Cc--hhHHHHHHHHHhhC----CCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCCCCc
Q 010820 182 --YE--NELTDSLAKAIDAY----PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL-GLDWSTPNHGPT 252 (500)
Q Consensus 182 --~~--~~l~~~v~~~l~~~----~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~-g~~~~~~~~~~~ 252 (500)
++ .++++.+++.+++. ++.+++||+|||++++|+|+++||.+++.+|++|++++.++++ |++.+++++ .+
T Consensus 137 ~~g~~~~~~~~~~a~~~~~~~~~~~~~~avlL~nHG~v~~G~~l~eA~~~~e~lE~~A~i~~~a~~l~g~~~~l~~~-~~ 215 (231)
T PRK13213 137 ITGDYEHETGKVIVETFAEQGLRAADIPAVLVNGHGPFAWGSNAANAVHNAVVLEEIAYMNLFTHQLTPGVGDMQQT-LL 215 (231)
T ss_pred cCCccccchHHHHHHHHHhhcccccCCCEEEECCCCcEEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHH-HH
Confidence 44 48889999988652 3458999999999999999999999999999999999999999 777776655 44
Q ss_pred cc
Q 010820 253 RN 254 (500)
Q Consensus 253 ~~ 254 (500)
++
T Consensus 216 ~~ 217 (231)
T PRK13213 216 DK 217 (231)
T ss_pred HH
Confidence 33
No 6
>PRK05834 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-43 Score=325.21 Aligned_cols=186 Identities=8% Similarity=0.097 Sum_probs=161.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCCC
Q 010820 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYP 106 (500)
Q Consensus 27 ~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~~ 106 (500)
.+++|++|++++|+|+++||+.+++||||+|++++ .|+|||||.++++|+++||++| ++|+.+++ .+|
T Consensus 3 ~~~~~~el~~~~~~l~~~gl~~gt~GNiS~R~~~~-------~~lITPsG~~~~~l~~ediv~v-~~g~~~~~--~kP-- 70 (194)
T PRK05834 3 DSNLIDELKSISLSMFRKNFFGLYHGSISAKIEAN-------QFIINKQNAIFDELDENSLIVL-YDKKDYRW--KEA-- 70 (194)
T ss_pred HHHHHHHHHHHHHHHHHCCCcccccceEEEEeCCC-------cEEEeCCCCccccCCHHHeEEE-eCCCccCC--CCC--
Confidence 45789999999999999999999999999999763 7999999999999999999999 89987765 356
Q ss_pred CCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCC-CCch
Q 010820 107 HKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYEN 184 (500)
Q Consensus 107 ~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~-~~~~ 184 (500)
|+|++||+.|||.| |++||+|+||+|++++|+.+. ++|+..+++... .| .||+++|. +++.
T Consensus 71 ------SsE~~~H~~IY~~rpdv~AVvHtHs~~ata~s~~~~---~i~~~~~~~~~~-~g-------~ipv~~~~~~~~~ 133 (194)
T PRK05834 71 ------SIDSPIHASIYKNISEAKFIAYAMPPYTTAYSLRHN---KILPRDYFGYRS-LG-------EISIYDPKDFDDW 133 (194)
T ss_pred ------CccHHHHHHHHhcCCCCCEEEEeCCHHHHHHHhcCC---CcCccChhHHhh-CC-------eeeecCccccchH
Confidence 99999999999999 999999999999999999864 465555555432 23 39999874 4443
Q ss_pred --hHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 010820 185 --ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGL 242 (500)
Q Consensus 185 --~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~ 242 (500)
+++++++++|++. +.+++||+|||+++||+|+++||.+++.+|++|++++.++++|.
T Consensus 134 ~~~la~~v~~~l~~~-~~~avLL~nHGvv~~G~~l~eA~~~~e~lE~~a~i~~~a~~~~~ 192 (194)
T PRK05834 134 YERADTEILRYLQEK-NKNFVVIKGYGVYAYARDIYELAKKIAILENSCKILRLSDLMDR 192 (194)
T ss_pred HHhHHHHHHHHHhhc-CCCEEEEcCCcceEECCCHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 5789999999873 23599999999999999999999999999999999999999885
No 7
>PRK12348 sgaE L-ribulose-5-phosphate 4-epimerase; Reviewed
Probab=100.00 E-value=1e-43 Score=334.79 Aligned_cols=201 Identities=17% Similarity=0.241 Sum_probs=167.4
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCCCC
Q 010820 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPH 107 (500)
Q Consensus 28 ~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~~~ 107 (500)
+++|++|+++||+|+++||+.+++||||+|++++ +.|||||||.++++|+++||++||++|++++|. .+|
T Consensus 2 ~~~~~~l~~~~~~l~~~Gl~~g~~GNiS~r~~~~------~~~lItPsG~~~~~l~~~dlv~vd~dG~~ieg~-~kp--- 71 (228)
T PRK12348 2 QKLKQQVFEANMDLPRYGLVTFTWGNVSAIDRER------GLVVIKPSGVAYETMKADDMVVVDMSGKVVEGE-YRP--- 71 (228)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcCCCeEEEEeCCC------CEEEEeCCCCChhhCCHHHEEEECCCCCCCCCC-CCC---
Confidence 4689999999999999999999999999998763 489999999999999999999999999999986 456
Q ss_pred CCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccc-hhhHhhhhcCCcccCcceeeeeeCCC----
Q 010820 108 KPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRIT-HMEMIKGIKGHGYYDELVVPIIENTA---- 181 (500)
Q Consensus 108 ~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~vp~~~~~~---- 181 (500)
|+|+.||+.|||+| |++||||+||||+++||+.+.+ +|.. ..+.. .+.| .||++++.+
T Consensus 72 -----ssE~~lH~~IYr~rpdv~aVvHtH~p~ata~a~~~~~---ip~~~~~~~~-~~~g-------~i~~~~~~~~~~~ 135 (228)
T PRK12348 72 -----SSDTATHLELYRRYPSLGGIVHTHSTHATAWAQAGLA---IPALGTTHAD-YFFG-------DIPCTRGLSEEEV 135 (228)
T ss_pred -----CccHHHHHHHHHhCCCCCEEEecCcHHHHHHHHcCCC---CCCccHHHHH-HhCC-------CeeeecCCCchhh
Confidence 89999999999999 9999999999999999999753 4433 22222 2223 388887622
Q ss_pred ---CchhHHHHHHHHHhhC--CCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCCCCCcccc
Q 010820 182 ---YENELTDSLAKAIDAY--PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGL-DWSTPNHGPTRNF 255 (500)
Q Consensus 182 ---~~~~l~~~v~~~l~~~--~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~-~~~~~~~~~~~~~ 255 (500)
...++++.++++|++. .+.+++||+|||++++|+|+.+||.+++++|++|++++.++++|. +.++ +++.+++.
T Consensus 136 ~~~~~~~~~~~la~~l~~~~~~~~~avlL~nHG~v~~G~~l~eA~~~~~~lE~~a~~~~~a~~lg~~~~~~-~~~~~~~~ 214 (228)
T PRK12348 136 QGEYELNTGKVIIETLGNAEPLHTPGIVVYQHGPFAWGKDAHDAVHNAVVMEEVAKMAWIARGINPQLNHI-DSYLMNKH 214 (228)
T ss_pred ccchhhhHHHHHHHHHhhcCcccCcEEEEcCCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCC-CHHHHHHH
Confidence 2346788999999863 134799999999999999999999999999999999999999996 4454 44454443
No 8
>TIGR00760 araD L-ribulose-5-phosphate 4-epimerase. The homolog to this family from Mycobacterium smegmatis is flanked by putative araB and araA genes, consistent with it also being araD.
Probab=100.00 E-value=1.6e-43 Score=334.10 Aligned_cols=204 Identities=20% Similarity=0.272 Sum_probs=170.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCC-CCcccCCCCCCC
Q 010820 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN-GTTLSSPSPKPY 105 (500)
Q Consensus 27 ~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~-g~~~~g~~~~p~ 105 (500)
.+++|++|+++||+|+++||+.+++||||+|++++ +.|||||||.++++|+++||++||++ |++++|. .+|
T Consensus 2 ~~~~~~ei~~~~~~l~~~gl~~~~~GNiS~R~~~~------~~~lITPsG~~~~~l~~~div~vdl~~G~~i~g~-~kp- 73 (231)
T TIGR00760 2 LEQLKKEVLEANLALPKHQLVTFTWGNVSAIDRER------GLVVIKPSGVEYDVMTADDMVVVDLETGNVVEGS-KKP- 73 (231)
T ss_pred hHHHHHHHHHHHHHHHHCCCCCCCCCeEEEEecCC------CEEEEeCCCCChhhCCHHHEEEEcCcCCccCCCC-CCC-
Confidence 56789999999999999999999999999998663 47999999999999999999999999 9999986 456
Q ss_pred CCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccch-hhHhhhhcCCcccCcceeeeeeCC---
Q 010820 106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITH-MEMIKGIKGHGYYDELVVPIIENT--- 180 (500)
Q Consensus 106 ~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~vp~~~~~--- 180 (500)
|+|+.||+.|||+| |++||||+||||+++||+.+.+ +|... .+.. .+.| .||++++.
T Consensus 74 -------S~E~~lH~~IYr~rpdv~aVvHtH~p~ata~a~~~~~---lp~~~~~~~~-~~~g-------~ip~~~~~~~~ 135 (231)
T TIGR00760 74 -------SSDTPTHLALYRAFPSIGGIVHTHSRHATIWAQAGKD---IPALGTTHAD-YFYG-------TIPCTRPMTDE 135 (231)
T ss_pred -------CccHHHHHHHHHhCCCCCEEEecCcHHHHHHHHcCCC---CCCcchHHHH-HhCC-------ceeeecCCCcc
Confidence 99999999999999 9999999999999999999753 44332 2222 2223 38887753
Q ss_pred ----CCchhHHHHHHHHHhhC----CCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCc
Q 010820 181 ----AYENELTDSLAKAIDAY----PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPT 252 (500)
Q Consensus 181 ----~~~~~l~~~v~~~l~~~----~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~ 252 (500)
+...++++.++++|+++ .+.+++||+|||++++|+|+.+||.+++++|++|++++.++++|.+....+++++
T Consensus 136 ~~~~~~~~~~~~~la~~l~~~~~~~~~~~avlL~nHGvv~~G~~l~eA~~~~e~lE~~Ak~~~~a~~~g~~~~~~~~~~~ 215 (231)
T TIGR00760 136 EINGEYELETGKVIVETFEKRGIDPAQIPGVLVHSHGPFAWGKDAANAVHNAVVLEEVAYMALFSRQLNPQLPPMQQTLL 215 (231)
T ss_pred cccccchHhHHHHHHHHHhhccCCcccCCEEEEcCCCceEecCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCHHHH
Confidence 23457899999999863 1237999999999999999999999999999999999999999974444455565
Q ss_pred cccc
Q 010820 253 RNFK 256 (500)
Q Consensus 253 ~~~~ 256 (500)
++..
T Consensus 216 ~~~~ 219 (231)
T TIGR00760 216 DKHY 219 (231)
T ss_pred HHHH
Confidence 5443
No 9
>PRK07490 hypothetical protein; Provisional
Probab=100.00 E-value=9.6e-44 Score=338.55 Aligned_cols=209 Identities=15% Similarity=0.179 Sum_probs=176.3
Q ss_pred HhhccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCC-CcccCC
Q 010820 22 LEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNG-TTLSSP 100 (500)
Q Consensus 22 ~~~~~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g-~~~~g~ 100 (500)
|-+|+++++|++|+++||.++++||+.+++||||+|++++ ++.|||||||.++++|+++||++||++| ++++|.
T Consensus 3 ~~~~~~~~~r~~l~~~~r~l~~~Gl~~g~~GniS~r~~~~-----~~~~lItpsG~~~~~l~~~div~vd~dg~~~~~g~ 77 (245)
T PRK07490 3 MALSDEEQIRVDLAAAFRWIARLGMHEAVANHFSAAVSAD-----GKQFLLNPKWKHFSRIRASDLLLLDADDPSTAERP 77 (245)
T ss_pred cccHHHHHHHHHHHHHHHHHHHcCCcccccceEEEEccCC-----CCeEEEcCCCCChhhCcHHHeEEEcCCCCcccCCC
Confidence 4467788999999999999999999999999999999742 2489999999999999999999999999 567775
Q ss_pred CCCCCCCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeee-e
Q 010820 101 SPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPII-E 178 (500)
Q Consensus 101 ~~~p~~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~-~ 178 (500)
+.+| |+|+.||+.|||.| |++||||+||+|+++||+...+ .+|....+... +.| .||++ +
T Consensus 78 ~~~p--------sse~~lH~~iYr~rpdv~aVvHtH~~~ata~s~~~~~--~lp~~~~~~~~-~~g-------~v~~~~~ 139 (245)
T PRK07490 78 DVPD--------ATAWAIHGQIHRRLPHARCVMHVHSVYATALACLADP--TLPPIDQNTAR-FFN-------RVAVDTL 139 (245)
T ss_pred CCCC--------cHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHhcCC--CCCCccHHHHH-HcC-------CeeeccC
Confidence 4334 89999999999999 9999999999999999998642 24433322222 223 38886 4
Q ss_pred CC-CCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccccc
Q 010820 179 NT-AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFK 256 (500)
Q Consensus 179 ~~-~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~ 256 (500)
|. +++.++++.++++|++ .++|||+|||+++||+|+++|+.+++.+|++|++++.++++|.+....+++++++..
T Consensus 140 y~~~~~~ela~~v~~~l~~---~~avlL~nHG~v~~G~~~~eA~~~~e~lE~~a~~~l~a~~~G~~~~~l~~~~~~~~~ 215 (245)
T PRK07490 140 YGGMALEEEGERLAGLLGD---KRRLLMGNHGVLVTGDTVAEAFDDLYYFERACQTYITALSTGQPLRVLSDAVAEKTA 215 (245)
T ss_pred CCCcCcHHHHHHHHHHhCc---CCEEEECCCCcEEecCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 64 5789999999999997 499999999999999999999999999999999999999999875555666777754
No 10
>cd00398 Aldolase_II Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). Class II enzymes are further divided into two sub-classes A and B. This family includes class II A aldolases and adducins which has not been ascribed any enzymatic function. Members of this class are primarily bacterial and eukaryotic in origin and include L-fuculose-1-phosphate, L-rhamnulose-1-phosphate aldolases and L-ribulose-5-phosphate 4-epimerases. They all share the ability to promote carbon-carbon bond cleavage and stabilize enolate intermediates using divalent cations.
Probab=100.00 E-value=1.1e-43 Score=332.26 Aligned_cols=200 Identities=26% Similarity=0.424 Sum_probs=173.6
Q ss_pred HHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCCCCC
Q 010820 29 ETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHK 108 (500)
Q Consensus 29 ~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~~~~ 108 (500)
++|++|+++||.++++||+.+++||||+|++++ +.|||||||.++++++++||++||++|++++| .+|
T Consensus 2 ~~~~~l~~~~r~l~~~Gl~~~~~GniS~R~~~~------~~~~itpsG~~~~~l~~~dlv~vd~~g~~~~g--~~p---- 69 (209)
T cd00398 2 KLKRKIIAACLLLDLYGWVTGTGGNVSARDRDR------GYFLITPSGVDYEEMTASDLVVVDAQGKVVEG--KKP---- 69 (209)
T ss_pred hHHHHHHHHHHHHHHcCCcccCCceEEEEeCCC------CEEEEeCCCCChHHCCHhhEEEEcCCCCCcCC--CCC----
Confidence 478999999999999999999999999999873 48999999999999999999999999999985 356
Q ss_pred CCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCC-C--Cch
Q 010820 109 PPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-A--YEN 184 (500)
Q Consensus 109 p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~-~--~~~ 184 (500)
|+|+.||..|||+| |++||+|+||+|+++||+.+. .++|..+.++...+.+ .||++||. | ++.
T Consensus 70 ----s~E~~lH~~iy~~rpdv~aViHtH~~~~~a~s~~~~--~~~p~~~~~~~~~~~~-------~ip~~~~~~~~~~~~ 136 (209)
T cd00398 70 ----SSETPLHLALYRARPDIGCIVHTHSTHATAVSQLKE--GLIPAGHTACAVYFTG-------DIPCTPYMTPETGED 136 (209)
T ss_pred ----CccHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHhCC--CCCCcchHHHHHHcCC-------CeeecCCcCCCccHH
Confidence 89999999999999 999999999999999999874 2456555544433323 39999995 5 688
Q ss_pred hHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccccc
Q 010820 185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFK 256 (500)
Q Consensus 185 ~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~ 256 (500)
++++.+++.+.+ .+++||+|||+++||+|+++|+.+++++|++|++++.++++|++....++++++++.
T Consensus 137 ~la~~~~~~l~~---~~~vll~nHG~~~~G~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~l~~~~~~~~~ 205 (209)
T cd00398 137 EIGTQRALGFPN---SKAVLLRNHGLFAWGPTLDEAFHLAVVLEVAAEIQLKALSMGGQLPPISLELLNKEY 205 (209)
T ss_pred HHHHHHhcCCCc---CCEEEEcCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 999988888865 499999999999999999999999999999999999999999865445666776654
No 11
>PRK12347 sgbE L-ribulose-5-phosphate 4-epimerase; Reviewed
Probab=100.00 E-value=3.2e-43 Score=331.33 Aligned_cols=203 Identities=19% Similarity=0.277 Sum_probs=168.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeC-CCCcccCCCCCCC
Q 010820 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSG-NGTTLSSPSPKPY 105 (500)
Q Consensus 27 ~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~-~g~~~~g~~~~p~ 105 (500)
++++|++|+++||+|+++||+.+++||||+|++++ +.|||||||+++++|+++||++||+ +|++++|. .+|
T Consensus 2 ~~~~~~~iv~~~~~l~~~gl~~~t~GNiS~R~~~~------~~~~ItPsG~~~~~l~~~div~vd~~~G~~i~g~-~kp- 73 (231)
T PRK12347 2 LEQLKADVLAANLALPAHHLVTFTWGNVSAVDETR------QLMVIKPSGVEYDVMTADDMVVVEIASGKVVEGS-KKP- 73 (231)
T ss_pred hHHHHHHHHHHHHHHHHCCCCCCCCceEEEEecCC------CeEEEeCCCCCcccCCHHHEEEEEcCCCcCCCCC-CCc-
Confidence 57789999999999999999999999999998663 4799999999999999999999999 99999986 356
Q ss_pred CCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCC----
Q 010820 106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT---- 180 (500)
Q Consensus 106 ~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~---- 180 (500)
|+|+.||+.|||.| |++||||+||+|+++||+.+.+ +|.........+.| .||+.+|.
T Consensus 74 -------S~E~~lH~~iYr~rpdv~aViHtHs~~ata~a~~~~~---lp~~~~~~~~~~~g-------~Ip~~~~~~~~~ 136 (231)
T PRK12347 74 -------SSDTPTHLALYRRYPEIGGIVHTHSRHATIWSQAGLD---LPAWGTTHADYFYG-------AIPCTRLMTAEE 136 (231)
T ss_pred -------CccHHHHHHHHHhCCCCCEEEecCcHHHHHHHHcCCC---CCCcchHHHHHhCC-------ceeeecccCchh
Confidence 89999999999999 9999999999999999999753 44331112222323 38888763
Q ss_pred ---CCchhHHHHHHHHHhhC----CCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcc
Q 010820 181 ---AYENELTDSLAKAIDAY----PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTR 253 (500)
Q Consensus 181 ---~~~~~l~~~v~~~l~~~----~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~ 253 (500)
++..++++.++++|+.+ ++.++|||+|||++++|+|+.+||.+++++|++|++++.++++|.+....+++.++
T Consensus 137 ~a~~~~~e~~~~va~~l~~~~~~~~~~~avLL~NHG~v~~G~~l~eA~~~~e~lE~~A~~~~~a~~lg~~~~~~~~~~~~ 216 (231)
T PRK12347 137 INGEYEYQTGEVIIETFEERGISPAQIPAVLVHSHGPFAWGKNAADAVHNAVVLEECAYMGLFSRQLAPQLPAMQNELLD 216 (231)
T ss_pred cccccchhhHHHHHHHHhhccccccCCCEEEEcCCCceEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHH
Confidence 34558899999999853 24689999999999999999999999999999999999999999333333443444
Q ss_pred c
Q 010820 254 N 254 (500)
Q Consensus 254 ~ 254 (500)
+
T Consensus 217 ~ 217 (231)
T PRK12347 217 K 217 (231)
T ss_pred H
Confidence 3
No 12
>PRK06755 hypothetical protein; Validated
Probab=100.00 E-value=8.4e-43 Score=321.64 Aligned_cols=199 Identities=20% Similarity=0.302 Sum_probs=168.7
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCCCC
Q 010820 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPH 107 (500)
Q Consensus 28 ~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~~~ 107 (500)
-..|++|++++|.|+++||+.+++||+|+|.+++ ...|+|||||+++++|+|+||++||++|+.+.+.+.+|
T Consensus 5 ~~~~~~l~~~~~~l~~rGw~~gtsGNlSv~~~~~-----~~~~~ITpSG~~k~~L~~eDiv~vd~~g~~~~~~~~kP--- 76 (209)
T PRK06755 5 LKKWNELKDVKSELALRDWFYGTKISLSLCTSKE-----PLTFLVNVEGRDKGLFSEEDFIVVNCMCEPVFENEEKP--- 76 (209)
T ss_pred HHHHHHHHHHHHHHHHCCCCccCCCCeEEEecCC-----CcEEEEeCCCCCcccCCcccEEEEeCCCCCccCCCCCc---
Confidence 4568999999999999999999999999987543 13699999999999999999999999999884333466
Q ss_pred CCCCCCCChHHHHHHHhhCCccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCC-CCchhH
Q 010820 108 KPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYENEL 186 (500)
Q Consensus 108 ~p~~~S~e~~~H~~iy~~~~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~-~~~~~l 186 (500)
|+|+.||+.|||.++++||||+||+|++++|+.....+.+|+...++++.+++ .+..+..||++||. +++.++
T Consensus 77 -----SsE~~~H~~IY~~~~~~AVvHtHs~~at~ls~~~~~~~~i~~~~~e~~~~~g~-~~~~~~~IPiv~~~~~~~~~l 150 (209)
T PRK06755 77 -----AAESFMHADIYKKSSAECILQVQTVDSHLISELYGEEGEVTFDKRSVERVFGK-EGITEMTIPIVEDEKKFADLL 150 (209)
T ss_pred -----CccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHhhccCCcccccchHHHHHhcc-cCCCceEEEEEeCCCchhHHH
Confidence 99999999999988999999999999999999832223466566778777643 23333359999986 477888
Q ss_pred HHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 010820 187 TDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLD 243 (500)
Q Consensus 187 ~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~ 243 (500)
++.+.+.+++ .++|||+|||+++||+|+++|+.++|.+|++|++++.+++++..
T Consensus 151 a~~~~~~~~~---~~avLl~~HGv~~~G~~l~eA~~~~E~lE~l~~~~~~~~~l~~~ 204 (209)
T PRK06755 151 ENNVPNFIEG---GGVVLVHNYGMIVWGKTPEEAKKWLEGIEYLMNYHVKLLMIKGA 204 (209)
T ss_pred HHHHHhhccC---CCEEEEcCCCeEEEcCCHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 8888888865 49999999999999999999999999999999999999887654
No 13
>PRK08130 putative aldolase; Validated
Probab=100.00 E-value=3e-43 Score=329.52 Aligned_cols=202 Identities=24% Similarity=0.370 Sum_probs=171.1
Q ss_pred ccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCC
Q 010820 25 RAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKP 104 (500)
Q Consensus 25 ~~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p 104 (500)
|.++++|++|+++||.++++||+.+++||||+|++++ .|||||||.++++|+++||++||++|++++|. +|
T Consensus 1 ~~~~~~~~~l~~~~~~l~~~gl~~~~~GNiS~R~~~~-------~~lItpsG~~~~~l~~~div~vd~~g~~~~g~--~p 71 (213)
T PRK08130 1 MTEQALREEIVRLGRSLFQRGYTVGSAGNISARLDDG-------GWLVTPTGSCLGRLDPARLSKVDADGNWLSGD--KP 71 (213)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCCC-------CEEEeCCCCCccCCCHhHEEEECCCCCCCCCC--CC
Confidence 4578899999999999999999999999999999874 79999999999999999999999999999874 56
Q ss_pred CCCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCC--CcccccchhhHhhhhcCCcccCcceeeeeeC-C
Q 010820 105 YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPM--SKEFRITHMEMIKGIKGHGYYDELVVPIIEN-T 180 (500)
Q Consensus 105 ~~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~-~ 180 (500)
|+|+.+|+.||+.| |++||+|+||+|+++||+.+.. ...++....+....+ | .||++|| .
T Consensus 72 --------s~E~~~H~~iy~~rpdv~avvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~~-g-------~i~v~~y~~ 135 (213)
T PRK08130 72 --------SKEVPLHRAIYRNNPECGAVVHLHSTHLTALSCLGGLDPTNVLPPFTPYYVMRV-G-------HVPLIPYYR 135 (213)
T ss_pred --------ChhHHHHHHHHHhCCCCCEEEECCcHHHHHHHhcCccccccCCCCCChhhhhcc-C-------ccceECCCC
Confidence 89999999999999 9999999999999999998631 012332222222222 2 3999998 5
Q ss_pred CCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccccc
Q 010820 181 AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFK 256 (500)
Q Consensus 181 ~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~ 256 (500)
|++.++++.+++.++++ ++|||+|||+++||+|+++|+.+++++|++|++++.++..+ +..+ ++++++++.
T Consensus 136 ~g~~~la~~~~~~l~~~---~~vll~nHGvi~~G~s~~~A~~~~e~lE~~a~~~~~a~~~~-~~~l-~~~~~~~~~ 206 (213)
T PRK08130 136 PGDPAIAEALAGLAARY---RAVLLANHGPVVWGSSLEAAVNATEELEETAKLILLLGGRP-PRYL-TDEEIAELR 206 (213)
T ss_pred CChHHHHHHHHHHhccC---CEEEEcCCCCeeeCCCHHHHHHHHHHHHHHHHHHHHhcCCC-CCCC-CHHHHHHHH
Confidence 79999999999999975 99999999999999999999999999999999999998653 4555 444665543
No 14
>PRK06557 L-ribulose-5-phosphate 4-epimerase; Validated
Probab=100.00 E-value=3.8e-43 Score=330.98 Aligned_cols=202 Identities=21% Similarity=0.334 Sum_probs=173.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCCC
Q 010820 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYP 106 (500)
Q Consensus 27 ~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~~ 106 (500)
.+++|++|+++||.|+++||+.+++||||+|++++ +.|||||||.++++++++||++||++|++++|. .+|
T Consensus 8 ~~~~~~~l~~~~r~l~~~Gl~~~~~GNiS~R~~~~------~~~~ItpsG~~~~~l~~~div~vd~~G~~~~g~-~~p-- 78 (221)
T PRK06557 8 VEKLREEVCKLHLELPKYGLVVWTSGNVSARDPGT------DLVVIKPSGVSYDDLTPEDMVVVDLDGNVVEGD-LKP-- 78 (221)
T ss_pred HHHHHHHHHHHHHHHHHCCCccccCceEEEEeCCC------CEEEEeCCCCChhhCCHHHEEEEcCCCCCcCCC-CCC--
Confidence 67799999999999999999999999999999763 489999999999999999999999999999885 456
Q ss_pred CCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCC-CCch
Q 010820 107 HKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYEN 184 (500)
Q Consensus 107 ~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~-~~~~ 184 (500)
|+|+.||+.|||.| |++||+|+||+|+++||+.+. ++|.........+.+ .||+++|. +++.
T Consensus 79 ------s~E~~lH~~iy~~~pdv~aVvH~H~~~~~a~a~~~~---~~p~~~~~~~~~~~~-------~ip~~~y~~~g~~ 142 (221)
T PRK06557 79 ------SSDTASHLYVYRHMPDVGGVVHTHSTYATAWAARGE---PIPCVLTAMADEFGG-------PIPVGPFALIGDE 142 (221)
T ss_pred ------CccHHHHHHHHHhCCCCCEEEeeCcHHHHHHHHhCC---CCChhHHHHHHHhCC-------CeeccCCcCCCcH
Confidence 89999999999999 999999999999999999975 344322222222222 39999995 5899
Q ss_pred hHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccc
Q 010820 185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNF 255 (500)
Q Consensus 185 ~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~ 255 (500)
++++.+++.|.. ++.+++||+|||+++||+|+++|+.+++++|++|++++.++++|.+..++++ +++++
T Consensus 143 ela~~i~~~l~~-~~~~~vll~nHG~~~~G~~~~eA~~~~e~lE~~a~~~~~a~~~G~~~~l~~~-~~~~~ 211 (221)
T PRK06557 143 AIGKGIVETLKG-GRSPAVLMQNHGVFTIGKDAEDAVKAAVMVEEVARTVHIARQLGEPIPIPQE-EIDRL 211 (221)
T ss_pred HHHHHHHHHhCc-CCCCEEEECCCCceEEcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHH-HHHHH
Confidence 999999999931 2359999999999999999999999999999999999999999988776554 55444
No 15
>PRK06754 mtnB methylthioribulose-1-phosphate dehydratase; Reviewed
Probab=100.00 E-value=8.2e-43 Score=324.56 Aligned_cols=204 Identities=30% Similarity=0.494 Sum_probs=169.2
Q ss_pred cHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCC
Q 010820 26 AVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPY 105 (500)
Q Consensus 26 ~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~ 105 (500)
..+.++++|+++||+++++||+.+++||||+|++++ ...|||||||.++++|+++||++||.+|+.++|.+.+|
T Consensus 3 ~~~~~~~~l~~~~r~l~~~Gl~~g~~GNiSvR~~~~-----~~~~lITpSG~~~~~l~~~div~vd~~g~~~~~~~~kP- 76 (208)
T PRK06754 3 QLQRRWNELAEIKKELAARDWFPATSGNLSIKVSDD-----PLTFLVTASGKDKRKTTPEDFLLVDHDGKPVEETELKP- 76 (208)
T ss_pred hHHHHHHHHHHHHHHHHHcCCcccCCCEEEEEeCCC-----CCEEEEeCCCCCcccCCHHHEEEEcCCCCCCCCCCCCC-
Confidence 356789999999999999999999999999999763 12699999999999999999999999999998654466
Q ss_pred CCCCCCCCCChHHHHHHHhhCCccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCCCCchh
Q 010820 106 PHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENE 185 (500)
Q Consensus 106 ~~~p~~~S~e~~~H~~iy~~~~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~~~~~~ 185 (500)
|+|+.||+.|||..|++||||+||+|++++|+.......+++...+++..++.........||++++.+++++
T Consensus 77 -------SsE~~lH~~iY~~pdv~aViHtH~~~at~~s~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~vpv~~~~~~~~e 149 (208)
T PRK06754 77 -------SAETLLHTHIYNNTNAGCVLHVHTVDNNVISELYGDDGAVTFQGQEIIKALGIWEENAEIHIPIIENHADIPT 149 (208)
T ss_pred -------CccHHHHHHHHhCCCCeEEEEeCCHHHHHHHhhcCCCCeeeecChhhhhccCccccCceEEEEEecCCCCHHH
Confidence 9999999999986699999999999999999986422345544445544331100001124899987678999
Q ss_pred HHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 010820 186 LTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDW 244 (500)
Q Consensus 186 l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~ 244 (500)
|++.+.++|+. +.+++||+|||+++||+|+.+|+.++|.+|++|++++.+++++.+.
T Consensus 150 La~~v~~~l~~--~~~avLl~nHG~v~~G~~l~~A~~~~E~lE~~a~~~~~~~~~~~~~ 206 (208)
T PRK06754 150 LAEEFAKHIQG--DSGAVLIRNHGITVWGRDAFEAKKHLEAYEFLFSYHIKLLSIQGGV 206 (208)
T ss_pred HHHHHHHHhcc--CCcEEEECCCceEEEeCCHHHHHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 99999999982 2599999999999999999999999999999999999999887653
No 16
>PRK13145 araD L-ribulose-5-phosphate 4-epimerase; Provisional
Probab=100.00 E-value=4.3e-43 Score=331.12 Aligned_cols=205 Identities=20% Similarity=0.298 Sum_probs=169.4
Q ss_pred ccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCC
Q 010820 25 RAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKP 104 (500)
Q Consensus 25 ~~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p 104 (500)
|..+++|++|+++||+|+++||+.+++||||+|.+++ +.|||||||.++++|+++||++||++|++++|. .+|
T Consensus 1 ~~~~~~r~~l~~~~r~l~~~gl~~g~~GNiS~r~~~~------~~~~ItPsg~~~~~l~~~div~vd~~G~~~eG~-~kP 73 (234)
T PRK13145 1 KNLQEMRERVCAANKSLPKHGLVKFTWGNVSEVCREL------GRIVIKPSGVDYDELTPENMVVTDLDGNVVEGD-LNP 73 (234)
T ss_pred CcHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEecCC------CEEEEeCCCCCcccCCHHHEEEECCCCCCcCCC-CCc
Confidence 4477899999999999999999999999999998763 489999999999999999999999999999986 456
Q ss_pred CCCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCC---
Q 010820 105 YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT--- 180 (500)
Q Consensus 105 ~~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~--- 180 (500)
|+|+.||..|||.| |++||||+||+|+++||+++. ++|.........+.| .||+.+|.
T Consensus 74 --------SsE~~lH~~IY~~rpdv~AVvHtH~~~ata~a~~~~---~lp~~~~~~~~~~~g-------~vp~~~~~~~~ 135 (234)
T PRK13145 74 --------SSDLPTHVELYKAWPEVGGIVHTHSTEAVGWAQAGR---DIPFYGTTHADYFYG-------PIPCARSLTKD 135 (234)
T ss_pred --------cccHHHHHHHHHhCCCCCEEEeCCCHHHHHHHHcCC---CCCCchhHHHHHhCC-------CcccccccCcc
Confidence 89999999999999 999999999999999999975 344321111112323 38888763
Q ss_pred ----CCchhHHHHHHHHHhhCC----CccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCCCCCC
Q 010820 181 ----AYENELTDSLAKAIDAYP----KATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG-LDWSTPNHGP 251 (500)
Q Consensus 181 ----~~~~~l~~~v~~~l~~~~----~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g-~~~~~~~~~~ 251 (500)
+...++++.+++++++.+ +.+++||+|||++++|+|+++||.+++++|++|++++.++++| .+.++|++ .
T Consensus 136 ~~~~~~~~~~~~~va~~l~~~~~~~~~~~avLL~nHG~v~~G~~l~eA~~~~e~lE~~A~~~~~a~~lg~~~~~~~~~-~ 214 (234)
T PRK13145 136 EVNGAYEKETGSVIIEEFEKRGLDPMAVPGIVVRNHGPFTWGKNPEQAVYHSVVLEEVAKMNRLTEQINPRVEPAPQY-I 214 (234)
T ss_pred ccccccchhhHHHHHHHHhhhccccccCCEEEEcCCCeeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHH-H
Confidence 235577889999998631 2479999999999999999999999999999999999999999 44444443 4
Q ss_pred cccc
Q 010820 252 TRNF 255 (500)
Q Consensus 252 ~~~~ 255 (500)
++++
T Consensus 215 ~~~~ 218 (234)
T PRK13145 215 MDKH 218 (234)
T ss_pred HHHH
Confidence 4433
No 17
>PRK06486 hypothetical protein; Provisional
Probab=100.00 E-value=3.7e-43 Score=336.75 Aligned_cols=208 Identities=17% Similarity=0.210 Sum_probs=177.4
Q ss_pred HhhccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCC
Q 010820 22 LEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPS 101 (500)
Q Consensus 22 ~~~~~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~ 101 (500)
..+-+++++|++|+++||.++++||+.+++||||+|++++ .+.|||||||.++++|+++||++||++|++++|.
T Consensus 19 ~~~~~~~~~r~~l~~~~r~l~~~Gl~~gt~GNiSvR~~~~-----~~~~lITPsG~~~~~lt~eDlv~vd~dG~~veg~- 92 (262)
T PRK06486 19 LDSDAVAQARVDLAACFRAAARHGLEEGICNHFSAVLPGH-----DDLFLVNPYGYAFSEITASDLLICDFDGNVLAGR- 92 (262)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHcCCccccCceEEEEecCC-----CCEEEEcCCCCCcccCcHHHeEEECCCCCCcCCC-
Confidence 3444578899999999999999999999999999999752 1479999999999999999999999999999986
Q ss_pred CCCCCCCCCCCC-CChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeee-
Q 010820 102 PKPYPHKPPKCS-DCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIE- 178 (500)
Q Consensus 102 ~~p~~~~p~~~S-~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~- 178 (500)
.+| | +|+.||+.|||+| |++||||+||+|+++||+... .++++..+++.+.+ | .||+++
T Consensus 93 ~kP--------s~~e~~lH~~IYr~rpDv~aVvHtHs~~a~a~s~~~~--~~l~~~~~~~~~~~-g-------~i~~~~~ 154 (262)
T PRK06486 93 GEP--------EATAFFIHARIHRAIPRAKAAFHTHMPYATALSLTEG--RPLTTLGQTALKFY-G-------RTAVDED 154 (262)
T ss_pred CCC--------ChhHHHHHHHHHHhCCCCCEEEEeCChHHhhhhhcCC--CCCCcccHHHHHHC-C-------CeeeccC
Confidence 356 6 4699999999999 999999999999999999842 24555555554322 3 277776
Q ss_pred C--CCCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCccccc
Q 010820 179 N--TAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFK 256 (500)
Q Consensus 179 ~--~~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~ 256 (500)
| .+++.++++.++++|+++ ++|||+|||+++||+|+++||.+++++|++|++++.++++|.+...++++.++++.
T Consensus 155 ~~~~~~s~ela~~va~al~~~---~avLL~nHG~v~~G~~l~eA~~~~~~lE~~a~i~~~a~~~G~~~~~~~~~~~~~~~ 231 (262)
T PRK06486 155 YNGLALDAAEGDRIARAMGDA---DIVFLKNHGVMVCGPRIAEAWDDLYYLERACEVQVLAMSTGRPLVPVDPAIAAAVA 231 (262)
T ss_pred CCCccCchhHHHHHHHHhCcC---CEEEECCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 3 246889999999999974 99999999999999999999999999999999999999999876666776777765
No 18
>PRK09220 methylthioribulose-1-phosphate dehydratase; Provisional
Probab=100.00 E-value=2.9e-42 Score=319.92 Aligned_cols=201 Identities=24% Similarity=0.441 Sum_probs=173.0
Q ss_pred ccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCC
Q 010820 25 RAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKP 104 (500)
Q Consensus 25 ~~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p 104 (500)
|..++.+++|++++|+|+++||+.+++||||+|++++ .|||||||.++++|+++||++||++|++++|. .+|
T Consensus 1 ~~~~~~~~~l~~~~r~l~~~Gl~~~~~GNiSvr~~~~-------~~lItpsG~~~~~l~~~di~~vd~~g~~~~~~-~~P 72 (204)
T PRK09220 1 MTLEELLQQLIAAGRWIGARGWVPATSGNMSVRLDEQ-------HCAITVSGKDKGSLTAEDFLQVDIAGNAVPSG-RKP 72 (204)
T ss_pred CcHHHHHHHHHHHHHHHHHCCCCCCCCceEEEEcCCC-------EEEEECCCCChhHCChhhEEEEcCCCCCCCCC-CCc
Confidence 5678899999999999999999999999999999763 89999999999999999999999999999865 356
Q ss_pred CCCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCccc-CcceeeeeeCCCC
Q 010820 105 YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYY-DELVVPIIENTAY 182 (500)
Q Consensus 105 ~~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~vp~~~~~~~ 182 (500)
|+|+.||+.|||+| |++||+|+||+|++++|+.... ..++...+++.+.++|.++. ....||+++..++
T Consensus 73 --------s~E~~lH~~iy~~rpdv~aViH~H~~~~~a~s~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~vp~~~~~~~ 143 (204)
T PRK09220 73 --------SAETLLHTQLYRLFPEIGAVLHTHSVNATVLSRVEKS-DALVLEGYELQKAFAGQTTHETAVVVPIFDNDQD 143 (204)
T ss_pred --------ChhHHHHHHHHHhCCCCcEEEecCcHHHHHHHhhcCC-CeeeecChhHHHHhCCCcccCCeeEEeeecCCCC
Confidence 89999999999999 9999999999999999998642 33665666666555543221 1124787766567
Q ss_pred chhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 010820 183 ENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGL 242 (500)
Q Consensus 183 ~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~ 242 (500)
+.++++.++++|++++..+++||+|||+++||+|+++||.++|.+|+.|++.+.+++++.
T Consensus 144 ~~eLa~~v~~~l~~~~~~~avlL~nHGvi~~G~~~~eA~~~~e~lE~~~~~~~~~~~~~~ 203 (204)
T PRK09220 144 IARLAARVAPYLDAQPLRYGYLIRGHGLYCWGRDMAEARRHLEGLEFLFECELERRLLEA 203 (204)
T ss_pred HHHHHHHHHHHHHhCCCCcEEEECCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 899999999999986545699999999999999999999999999999999999988763
No 19
>PRK06661 hypothetical protein; Provisional
Probab=100.00 E-value=8.2e-43 Score=328.89 Aligned_cols=201 Identities=14% Similarity=0.151 Sum_probs=170.5
Q ss_pred HHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCCCCC
Q 010820 29 ETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHK 108 (500)
Q Consensus 29 ~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~~~~ 108 (500)
++|++|+++||.|+++||+.+++||||+|++++ +.|||||||.++++|+++||++||++|++++|.. +|
T Consensus 2 ~~r~~l~~a~r~l~~~Gl~~g~~GNiS~R~~~~------~~~lItPsG~~~~~l~~~div~vd~dG~~~~g~~-~~---- 70 (231)
T PRK06661 2 DIKYNLAAAYRIMAYLSLDDHTYTHLSARPKNA------DFYYIYPFGLRFEEVTTENLLKVSLDGQILEGEE-YQ---- 70 (231)
T ss_pred cHHHHHHHHHHHHHHcCCcccCCceEEEEeCCC------CEEEEeCCCCChhhCcHHHeEEECCCCCCcCCCC-CC----
Confidence 468999999999999999999999999998663 4899999999999999999999999999999853 22
Q ss_pred CCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCC-CCc--h
Q 010820 109 PPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYE--N 184 (500)
Q Consensus 109 p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~-~~~--~ 184 (500)
.+|+|+.||+.|||.| |++||||+||+|++++|+.+... .|+.+..+. +.| .||+.+|. +.. .
T Consensus 71 --~~sse~~lH~~IY~~rpdv~aVvH~H~~~a~a~s~~~~~~--~p~~~~~~~--~~~-------~i~~~~~~~~~~~~~ 137 (231)
T PRK06661 71 --YNKTGYFIHGSIYKTRPDISAIFHYHTPASIAVSALKCGL--LPISQWALH--FYD-------RISYHNYNSLALDAD 137 (231)
T ss_pred --CChhHHHHHHHHHHcCCCCCEEEEECChHHHHHHhcCCCC--CCccHhHHH--HcC-------CceecCCCccccCch
Confidence 0167999999999999 99999999999999999997532 233333221 222 28888764 344 6
Q ss_pred hHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCCCCCCccccc
Q 010820 185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL-GLDWSTPNHGPTRNFK 256 (500)
Q Consensus 185 ~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~-g~~~~~~~~~~~~~~~ 256 (500)
+.++.++++++++ +++||+|||+++||+|+++||.+++++|++|++++.++++ |.+..+++++.+++.+
T Consensus 138 ~~~~~~a~~l~~~---~avll~nHG~v~~G~sl~eA~~~~~~lE~~a~~~~~a~~~~g~~~~l~~~~~~~~~~ 207 (231)
T PRK06661 138 KQSSRLVNDLKQN---YVMLLRNHGAITCGKTIHEAMFYTYHLEQACKTQCLLNSTKKQELIIPSVEICKKTV 207 (231)
T ss_pred hHHHHHHHHhCCC---CEEEECCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 7899999999874 9999999999999999999999999999999999999999 8888888887766655
No 20
>TIGR01086 fucA L-fuculose phosphate aldolase. Members of this family are L-fuculose phosphate aldolase from various Proteobacteria, encoded in fucose utilization operons. Homologs in other bacteria given similar annotation may share extensive sequence similarity but are not experimenally characterized and are not found in apparent fucose utilization operons; we consider their annotation as L-fuculose phosphate aldolase to be tenuous. This model has been narrowed in scope from the previous version.
Probab=100.00 E-value=1.1e-42 Score=325.72 Aligned_cols=197 Identities=19% Similarity=0.202 Sum_probs=171.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCCC
Q 010820 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYP 106 (500)
Q Consensus 27 ~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~~ 106 (500)
+.++|++|+++||.|+++||+.+++||||+|+++ .|||||||+++++|+++||++||++|++++|. +|
T Consensus 2 ~~~~~~~i~~~~~~l~~~Gl~~g~~GNiS~R~~~--------~~lItPsG~~~~~l~~~div~vd~~G~~~~g~--kp-- 69 (214)
T TIGR01086 2 RRELSQRIIDTCLEMTTLGLNQGTAGNVSVRRYQ--------GMLITPTGGPYYEKLTESIVYVIDGGGKEEEK--LP-- 69 (214)
T ss_pred hHHHHHHHHHHHHHHHHcCCCCCCcceEEEECCC--------CEEEECCCCCcccCCHHHEEEEcCCCCCCCCC--CC--
Confidence 4678999999999999999999999999999876 49999999999999999999999999999873 66
Q ss_pred CCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCC-CCch
Q 010820 107 HKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYEN 184 (500)
Q Consensus 107 ~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~-~~~~ 184 (500)
|+|+.||..||+.+ |++||||+||+|++++++.+. ++|+..+++.....+ .||+++|. +++.
T Consensus 70 ------sse~~~H~~iy~~rpdv~avvH~H~~~~~~~~~~~~---~lp~~~~~~~~~~~~-------~i~~v~y~~~gs~ 133 (214)
T TIGR01086 70 ------SSEWWFHLMAYYQRRPDNAVVHNHHIVCATASILLK---RIPAIHYMVAASGGG-------NIPCVPYATFGST 133 (214)
T ss_pred ------ChhHHHHHHHHHhCCCCCEEEeCCCHHHHHHHHcCC---CCCcchHHHHHhcCC-------CccccCCCCCChH
Confidence 89999999999999 999999999999999998864 345444444432212 38999995 6899
Q ss_pred hHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCCCCCcccc
Q 010820 185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGL-DWSTPNHGPTRNF 255 (500)
Q Consensus 185 ~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~-~~~~~~~~~~~~~ 255 (500)
++++.+++.++++ ++|||+|||+++||+|+++|+.+++.+|++|++++.++.+|+ +..++++ ++.+.
T Consensus 134 ~la~~v~~~~~~~---~~vLL~nHG~~~~G~~l~eA~~~~e~lE~~a~~~~~a~~~g~~~~~l~~~-~~~~~ 201 (214)
T TIGR01086 134 KLASEVVAGILKS---KAILLLHHGLIIACENLLKALWLAAEVEVLAAQYLKTLLAITDPPPLLSD-EMIVV 201 (214)
T ss_pred HHHHHHHHHhhhC---CEEehhcCCCEEecCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCHH-HHHHH
Confidence 9999999999974 899999999999999999999999999999999999998885 6666555 44433
No 21
>PRK07090 class II aldolase/adducin domain protein; Provisional
Probab=100.00 E-value=1.5e-42 Score=332.27 Aligned_cols=215 Identities=18% Similarity=0.229 Sum_probs=174.5
Q ss_pred hhhHHHHhhc---cHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeC
Q 010820 16 THTQAYLEGR---AVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSG 92 (500)
Q Consensus 16 ~~~~~~~~~~---~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~ 92 (500)
++++++++.. +++.+|++|+++||.++++||+.+++||||+|++++ +.|||||||.++++|+++||++||+
T Consensus 14 ~~~~~~~~~~~~~~~~~~r~~l~~~~r~l~~~Gl~~g~~GNiS~R~~~~------~~~lItPsG~~~~~lt~~Div~vd~ 87 (260)
T PRK07090 14 ARAQRQMDNELKDSGWTLRQKLALTCRILFDAGHDSGLAGQITARAEAP------GTYYTQRLGLGFDEITASNLLLVDE 87 (260)
T ss_pred HHHHHHHhhhcCHHHHHHHHHHHHHHHHHHHcCCcccCCceEEEEeCCC------CEEEEeCCCCChhhCCHHHeEEECC
Confidence 3455564432 367889999999999999999999999999999763 4799999999999999999999999
Q ss_pred CCCcccCCCCCCCCCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcC-CcccC
Q 010820 93 NGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKG-HGYYD 170 (500)
Q Consensus 93 ~g~~~~g~~~~p~~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g-~~~~~ 170 (500)
+|++++|. .+| |+|+.||+.|||.| |++||+|+||||+++||+.+. +++..++.... +.+ ..+++
T Consensus 88 dG~~v~G~-~kP--------s~E~~lH~~IYr~rPDv~AVvHtH~p~ata~s~~~~---~l~~~~~~~~~-~~~~~~~~~ 154 (260)
T PRK07090 88 DLNVLDGE-GMP--------NPANRFHSWIYRARPDVNCIIHTHPPHVAALSMLEV---PLVVSHMDTCP-LYDDCAFLK 154 (260)
T ss_pred CCCCCCCC-CCC--------ChhHHHHHHHHHhCCCCCEEEEeCCHHHHHHHhcCC---CCCccchhHHh-hccceeecc
Confidence 99999986 356 89999999999999 999999999999999999874 34432222111 111 11111
Q ss_pred cceeeeeeCCCCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 010820 171 ELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHG 250 (500)
Q Consensus 171 ~~~vp~~~~~~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~ 250 (500)
.+|.+ |.+.++++.++++|+++ +++||+|||++++|+|+++||.+++++|++|++++.++++|.+..+++ +
T Consensus 155 --~~~~i---p~~~~~a~~va~~l~~~---~avLL~nHGvi~~G~~l~eA~~~~~~LE~~A~i~l~a~~~G~~~~l~~-e 225 (260)
T PRK07090 155 --DWPGV---PVGNEEGEIISAALGDK---RAILLSHHGQLVAGKSIEEACVLALLIERAARLQLLAMAAGPIKPIPP-E 225 (260)
T ss_pred --CcCCc---CCChHHHHHHHHHhccC---CEEEECCCCCeEEcCCHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCH-H
Confidence 12332 33456799999999974 899999999999999999999999999999999999999998777655 5
Q ss_pred Cccccccc
Q 010820 251 PTRNFKLG 258 (500)
Q Consensus 251 ~~~~~~~~ 258 (500)
+++++...
T Consensus 226 ~~~~~~~~ 233 (260)
T PRK07090 226 LAREAHDW 233 (260)
T ss_pred HHHHHHHh
Confidence 77777643
No 22
>PRK06357 hypothetical protein; Provisional
Probab=100.00 E-value=3.2e-42 Score=321.20 Aligned_cols=193 Identities=18% Similarity=0.256 Sum_probs=163.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCC---cCCCCCCCEEEEe-CCCCcccCCCC
Q 010820 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQ---KERMEPEDMYVLS-GNGTTLSSPSP 102 (500)
Q Consensus 27 ~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~---~~~l~~~di~~vd-~~g~~~~g~~~ 102 (500)
.+++|++|+++||+++++||+.+++||||+|+++. ...+.|||||||++ +++|+++||++|| .+|++++|. .
T Consensus 3 ~~~~r~~l~~~~r~l~~~Gl~~gt~GNiS~R~~~~---~~~~~~~ITpsg~~g~~~~~lt~~Div~vd~~~g~~~~g~-~ 78 (216)
T PRK06357 3 FQKEREDLAKVVKTMFDRKETNAAGGNISVRMTAE---KNKEYIIMTPTLMSEAKLCDLSPYQILVVDLNTGEVIEGV-G 78 (216)
T ss_pred hHHHHHHHHHHHHHHHHcCCCccCCCEEEEEeccc---CCCCeEEEeCCCCCccccccCCHHHEEEEecCCCeEcCCC-C
Confidence 67789999999999999999999999999999420 00248999999875 9999999999999 589999986 3
Q ss_pred CCCCCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCC-
Q 010820 103 KPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT- 180 (500)
Q Consensus 103 ~p~~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~- 180 (500)
+| |+|+.||+.||+.| |++||||+||+|+++|++.+.+ +|.... ....+ | .||++||.
T Consensus 79 kP--------SsE~~lH~~IY~~rpdv~aVvH~H~~~ata~a~~~~~---lp~~~~-~~~~~-g-------~i~~~p~~~ 138 (216)
T PRK06357 79 RV--------TREINMHEAAYVANPKIKCVYHSHAKESMFWATLGLE---MPNLTE-ATQKL-G-------KIPTLPFAP 138 (216)
T ss_pred CC--------ChhHHHHHHHHHhCCCCCEEEecCcHHHHHHHHcCCC---CCCccH-HHHhc-C-------CcceecccC
Confidence 56 99999999999999 9999999999999999988643 443222 22222 3 38999985
Q ss_pred CCchhHHHHHHHHHhhCCC---ccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 010820 181 AYENELTDSLAKAIDAYPK---ATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLD 243 (500)
Q Consensus 181 ~~~~~l~~~v~~~l~~~~~---~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~ 243 (500)
+++.++++.+++++++.++ .+++||+|||+++||+|+.+||.++|++|++|++++.+++++..
T Consensus 139 ~gs~ela~~v~~~l~~~~~~~~~~~vLl~nHGvv~~G~~l~eA~~~~e~lE~~a~i~~~a~~l~~~ 204 (216)
T PRK06357 139 ATSPELAEIVRKHLIELGDKAVPSAFLLNSHGIVITDTSLHKAYDILETIEWNAYIAYQATVFDKL 204 (216)
T ss_pred CCcHHHHHHHHHHHhhcCcccCCCEEEECCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 6899999999999986321 27999999999999999999999999999999999999998853
No 23
>PRK06208 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-42 Score=332.89 Aligned_cols=204 Identities=16% Similarity=0.207 Sum_probs=172.9
Q ss_pred cHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCC
Q 010820 26 AVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPY 105 (500)
Q Consensus 26 ~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~ 105 (500)
+.+.+|++|++++|.|+++||+.+++||||+|++++ .+.|||||||.++++|+++||++||++|++++|. +|+
T Consensus 39 ~~~~~~~~l~~~~r~l~~~Gl~~g~~GNIS~R~~~~-----~~~~lITPsG~~~~~lt~eDiv~vd~dG~~v~G~--~ps 111 (274)
T PRK06208 39 ERLHRKQRLAAAFRLFARFGFDEGLAGHITARDPEL-----PDHFWVNPLGVHFSQIKVSDLLLVDHDGEVVEGD--RPL 111 (274)
T ss_pred HHHHHHHHHHHHHHHHHHcCCccccCceEEEEccCC-----CCeEEEcCCCCChhhCcHHHeEEECCCCCCcCCC--CCC
Confidence 355679999999999999999999999999999752 2489999999999999999999999999999985 441
Q ss_pred CCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCCC---
Q 010820 106 PHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTA--- 181 (500)
Q Consensus 106 ~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~~--- 181 (500)
.++|+.||+.||+.| |++||||+||+|+++||+.+.. ++....+.. .+.| .||++++..
T Consensus 112 ------~~sE~~lH~~IYr~rpDv~AViHtHpp~ata~s~~~~~---l~~i~~~~~-~~~~-------~ip~~~~~~g~~ 174 (274)
T PRK06208 112 ------NRAAFAIHSAIHEARPDVVAAAHTHSTYGKAWSTLGRP---LDPITQDAC-AFYE-------DHALFDDFTGVV 174 (274)
T ss_pred ------CHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHhCCC---CChhhHHHH-HHcC-------CceeccCCCCcc
Confidence 146899999999999 9999999999999999998753 333333333 2323 388876533
Q ss_pred CchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccc
Q 010820 182 YENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL 257 (500)
Q Consensus 182 ~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~ 257 (500)
++.++++.++++|+++ ++|||+|||+++||+|+++||.+++++|++|++++.++.+|.+..+ +++++++++.
T Consensus 175 ~s~ela~~va~~l~~~---~avLL~NHGvv~~G~tl~eA~~~~e~lE~aA~i~l~a~~~G~~~~L-~~e~~~~~~~ 246 (274)
T PRK06208 175 VDTSEGRRIAAALGTH---KAVILQNHGLLTVGPSVDAAAWWFIALERACQTQLLAEAAGPPQPI-DHETARHTRS 246 (274)
T ss_pred CchHHHHHHHHHhccC---CEEEECCCCceEeeCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcCC-CHHHHHHHHH
Confidence 4889999999999975 9999999999999999999999999999999999999999987765 4557777764
No 24
>PRK07044 aldolase II superfamily protein; Provisional
Probab=100.00 E-value=2.2e-42 Score=330.88 Aligned_cols=208 Identities=16% Similarity=0.219 Sum_probs=175.5
Q ss_pred hccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCC
Q 010820 24 GRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPK 103 (500)
Q Consensus 24 ~~~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~ 103 (500)
+.+++++|++|+++||.|+++||+.+++||||+|++++ .+.|||||||.++++|+++||++||++|++++|.. +
T Consensus 11 ~~~~~~~r~~l~~~~r~l~~~Gl~~g~~GNiSvR~~~~-----~~~~lITpsG~~~~~l~~~div~vd~~g~~veg~~-~ 84 (252)
T PRK07044 11 SPAEWQARVDLAAAYRLVALLGWDDLIYTHISARVPGE-----EHHFLINPYGLLFDEITASNLVKIDLDGNVVDDSP-Y 84 (252)
T ss_pred CHHHHHHHHHHHHHHHHHHHcCCccccCcEEEEEccCC-----CCeEEEcCCCCChhhcCHHHeEEECCCCCCcCCCC-C
Confidence 44488999999999999999999999999999999752 24799999999999999999999999999998752 2
Q ss_pred CCCCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCC--
Q 010820 104 PYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-- 180 (500)
Q Consensus 104 p~~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~-- 180 (500)
| ..++|+.||+.||+.| |++||||+||+|+++||+..... .|+.+. ... +.| .||+.+|.
T Consensus 85 ~------~~pse~~lH~~iY~~rpdv~aViHtH~~~a~a~s~~~~~~--~p~~~~-~~~-~~g-------~i~~~~y~~~ 147 (252)
T PRK07044 85 P------VNPAGFTIHSAIHAARPDAHCVMHTHTTAGVAVSAQRDGL--LPLSQH-ALQ-FYG-------RLAYHDYEGI 147 (252)
T ss_pred C------CChHHhHHHHHHHHhCCCCcEEEEECCHHHHHHHHhCCCC--CcchHh-HHH-HcC-------CceeeCCCCC
Confidence 2 1146999999999999 99999999999999999986432 233333 222 223 28888885
Q ss_pred CCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccc
Q 010820 181 AYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGPTRNFKL 257 (500)
Q Consensus 181 ~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~~ 257 (500)
+.+.++++.+++.|++ .++|||+|||+++||+|+++|+.+++++|++|++++.++++|.+..+++++..++.+.
T Consensus 148 ~~~~e~~~~va~~l~~---~~avLL~nHGvi~~G~~l~eA~~~~e~lE~~a~~~~~a~~lG~~~~~~~~~~~~~~~~ 221 (252)
T PRK07044 148 ALDLDEGERLVADLGD---KPAMLLRNHGLLTVGRTVAEAFLLMYTLERACEIQVAAQAGGGELVLPPPEVAERTAR 221 (252)
T ss_pred cCCHHHHHHHHHHhcc---CCEEEECCCCceEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 3478889999999987 4999999999999999999999999999999999999999998877777767777664
No 25
>PRK08333 L-fuculose phosphate aldolase; Provisional
Probab=100.00 E-value=5.8e-42 Score=313.69 Aligned_cols=179 Identities=25% Similarity=0.344 Sum_probs=158.6
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCCCC
Q 010820 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPH 107 (500)
Q Consensus 28 ~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~~~ 107 (500)
.++|++|++++|+++++||+.+++||||+|+++ .|||||||.++++++++||++||++|+.++|. +|
T Consensus 2 ~~~~~~l~~~~~~~~~~gl~~~~~GNiS~R~~~--------~~lItpsG~~~~~l~~~di~~vd~~g~~~~g~--~P--- 68 (184)
T PRK08333 2 RNVKAQLVKYSKLAHERGLTAAFGGNLSIRVGN--------LVFIKATGSVMDELTREQVAVIDLNGNQLSSV--RP--- 68 (184)
T ss_pred hHHHHHHHHHHHHHHHCCCCcCCCCeEEEEeCC--------EEEEeCCCCCcccCCHHHEEEECCCCCCCCCC--CC---
Confidence 468999999999999999999999999999975 79999999999999999999999999999873 56
Q ss_pred CCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHH-hhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCC-CCch
Q 010820 108 KPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVT-MINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYEN 184 (500)
Q Consensus 108 ~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~-~~~~ 184 (500)
|+|+.+|..|||+| |++||+|+||+|++++| +.+. ++|....+... +.| .||++||. +++.
T Consensus 69 -----s~e~~lH~~iyr~rpdv~aViHtH~~~a~a~s~~~~~---~~p~~~~~~~~-~~~-------~v~v~~~~~~g~~ 132 (184)
T PRK08333 69 -----SSEYRLHLAVYRNRPDVRAIAHLHPPYSIVASTLLEE---ELPIITPEAEL-YLK-------KIPILPFRPAGSV 132 (184)
T ss_pred -----ChhHHHHHHHHHhCCCCCEEEeCCcHHHHHHHHHcCC---CCCCccHHHHH-hCC-------CEeeecCCCCCcH
Confidence 89999999999999 99999999999999999 6553 34433333322 222 39999996 5999
Q ss_pred hHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHH
Q 010820 185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLH 238 (500)
Q Consensus 185 ~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~ 238 (500)
++++.++++|+++ +++||+|||+++||+|+++|+.+++.+|++|++++.+.
T Consensus 133 ~la~~~~~~l~~~---~~vll~nHGv~~~G~~~~eA~~~~e~lE~~A~~~~~~~ 183 (184)
T PRK08333 133 ELAEQVAEAMKEY---DAVIMERHGIVTVGRSLREAFYKAELVEESAKLWYLKF 183 (184)
T ss_pred HHHHHHHHHhccC---CEEEEcCCCCEEEcCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999974 99999999999999999999999999999999998875
No 26
>TIGR03328 salvage_mtnB methylthioribulose-1-phosphate dehydratase. Members of this family are the methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway. This pathway allows methylthioadenosine, left over from polyamine biosynthesis, to be recycled to methionine.
Probab=100.00 E-value=1.1e-41 Score=313.74 Aligned_cols=190 Identities=37% Similarity=0.721 Sum_probs=165.8
Q ss_pred HHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCCCCCCCCCC
Q 010820 34 ISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCS 113 (500)
Q Consensus 34 l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~~~~p~~~S 113 (500)
|++++|+|+++||+.+++||||+|++++ .|||||||.++++++++||++||++|++++|. .+| |
T Consensus 1 i~~~~r~l~~~Gl~~~~~GniS~r~~~~-------~~lItpsg~~~~~l~~~di~~v~~~g~~~~g~-~~p--------s 64 (193)
T TIGR03328 1 LIEAGRDLYKRGWVPGTGGNLSARLDED-------EILITPSGVDKGRLTPEDFLVVDLQGKPVSGG-LKP--------S 64 (193)
T ss_pred CHHHHHHHHHcCCCccCCCEEEEEcCCC-------EEEEeCCCCChhhCCcceEEEEcCCCCCCCCC-CCC--------C
Confidence 4789999999999999999999999764 79999999999999999999999999999875 355 8
Q ss_pred CChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCccc-CcceeeeeeCCCCchhHHHHHH
Q 010820 114 DCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYY-DELVVPIIENTAYENELTDSLA 191 (500)
Q Consensus 114 ~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~vp~~~~~~~~~~l~~~v~ 191 (500)
+|+.+|+.|||+| |++||+|+||+|++++|+.......++...+++++.++|...+ +...||++++.+++.++++.++
T Consensus 65 ~e~~~H~~iy~~~pdv~aVvH~H~~~a~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~vp~~~~~~gs~ela~~~~ 144 (193)
T TIGR03328 65 AETLLHTQLYRLTPGAGAVLHTHSVEATVLSRLYPSNGAFELEGYEMLKALPGITTHEDKLTIPIFENTQDIARLADSVA 144 (193)
T ss_pred cHHHHHHHHHHhCCCCeEEEEcCCHHHHHHHhhcccCCeeeccchhhhhhhCCCcCCCCceEEeeecCCCChHHHHHHHH
Confidence 9999999999999 9999999999999999998543234666777776654442212 2224999999889999999999
Q ss_pred HHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHh
Q 010820 192 KAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQ 239 (500)
Q Consensus 192 ~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~ 239 (500)
++|+++++.+++||+|||+++||+|+++|+.++|.+|++|++.+.++.
T Consensus 145 ~~l~~~~~~~avll~nHGv~~~G~~~~~A~~~~e~lE~~a~~~~~~~~ 192 (193)
T TIGR03328 145 PYLEAYPDVPGVLIRGHGLYAWGRDWEEAKRHLEALEFLFECELEMLK 192 (193)
T ss_pred HHHhcCCCCCEEEEcCCcceEEcCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999865667999999999999999999999999999999999998865
No 27
>PRK08660 L-fuculose phosphate aldolase; Provisional
Probab=100.00 E-value=2.7e-41 Score=308.41 Aligned_cols=180 Identities=18% Similarity=0.295 Sum_probs=157.1
Q ss_pred HHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCCCCCC
Q 010820 30 TRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKP 109 (500)
Q Consensus 30 ~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~~~~p 109 (500)
+|++|++++|.|+++||+.+++||||+|+++ .|||||||.++++++++||++||++|+.. +. .+|
T Consensus 1 ~~~~l~~~~~~l~~~gl~~~~~GniS~R~~~--------~~lItpsg~~~~~l~~~dlv~vd~~g~~~-~~-~~p----- 65 (181)
T PRK08660 1 MWQEFARIGKKLFAHGLVSSHFGNISVRTGD--------GLLITRTGSMLDEITEGDVIEVGIDDDGS-VD-PLA----- 65 (181)
T ss_pred CHHHHHHHHHHHHHCCCcccCCceeEEEcCC--------EEEEeCCCCCcccCChhHEEEEcCCCCcc-CC-CCC-----
Confidence 3899999999999999999999999999954 89999999999999999999999999875 33 355
Q ss_pred CCCCCChHHHHHHHhhCCccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCCCCchhHHHH
Q 010820 110 PKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENTAYENELTDS 189 (500)
Q Consensus 110 ~~~S~e~~~H~~iy~~~~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~~~~~~l~~~ 189 (500)
|+|+.||+.|||.+|++||+|+||+|+++||+.+. ++++...+... +.| .||++...+++.++++.
T Consensus 66 ---s~E~~lH~~iy~~~dv~aVvH~H~~~~~a~s~~~~---~l~~~~~~~~~-~~~-------~ipv~~~~~~~~~la~~ 131 (181)
T PRK08660 66 ---SSETPVHRAIYRRTSAKAIVHAHPPYAVALSLLED---EIVPLDSEGLY-FLG-------TIPVVGGDIGSGELAEN 131 (181)
T ss_pred ---CccHHHHHHHHcCCCCCEEEEeCChHHHHHHHcCC---CCCCcCHHHHH-hcC-------CEeEEeCCCCCHHHHHH
Confidence 99999999999955999999999999999999864 34443343332 222 39998336799999999
Q ss_pred HHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcC
Q 010820 190 LAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLG 241 (500)
Q Consensus 190 v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g 241 (500)
++++|+++ +++||+|||+++||+|+++|+.+++.+|++|++++.+++++
T Consensus 132 v~~~l~~~---~~vll~nHG~~~~G~~i~~A~~~~e~lE~~a~i~~~~~~l~ 180 (181)
T PRK08660 132 VARALSEH---KGVVVRGHGTFAIGKTLEEAYIYTSQLEHSCKVLYLVRTAK 180 (181)
T ss_pred HHHHHhhC---CEEEEcCCCceEeCCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999974 99999999999999999999999999999999999998875
No 28
>COG0235 AraD Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-41 Score=317.36 Aligned_cols=193 Identities=29% Similarity=0.456 Sum_probs=172.1
Q ss_pred ccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCC
Q 010820 25 RAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKP 104 (500)
Q Consensus 25 ~~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p 104 (500)
+..++.|++|++++|.|+++||+.+++||||+|+++. ..|+|||||+.|++|+++||++||+||++++|. .+|
T Consensus 3 ~~~~~~~~~l~~~~~~l~~~g~~~~t~GniS~r~~~~------~~~~ItpsG~~~~~lt~~dlv~vd~~G~~~~g~-~~p 75 (219)
T COG0235 3 MMLEKLRQELAKAARLLARRGLVEGTAGNISVRLPEG------GLFLITPSGVPFGELTADDLVVVDLDGEVVEGG-KKP 75 (219)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCCcCCceEEEEcCCC------ceEEEeCCCCccccCcHHHeEEEeCCCcEecCC-CCC
Confidence 5688999999999999999999999999999999884 249999999999999999999999999999983 456
Q ss_pred CCCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcceeeeeeCC-CC
Q 010820 105 YPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AY 182 (500)
Q Consensus 105 ~~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~-~~ 182 (500)
|+|+++|..|||+| |++||+||||+|+++||+.+. .+++.+++....+++ .||+.+|. ++
T Consensus 76 --------Sse~~~H~~iY~~rpd~~aVvHtHs~~a~als~~~~---~l~~~~~~~~~~~~~-------~i~~~~~~~~~ 137 (219)
T COG0235 76 --------SSETPIHLAIYRARPDAGAVVHTHSPYATALSTLGE---PLPPLGTEHLKYFGG-------GIPCAPYAGPG 137 (219)
T ss_pred --------chhHHHHHHHHHhCCCCCEEEecCcHHHHHHHHhcC---CCCCCCHHHHHHcCC-------CcccccCCCCC
Confidence 99999999999999 999999999999999999984 566666767666554 39999985 57
Q ss_pred chhHHHHHHHHHhhCCCccEEE--EccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 010820 183 ENELTDSLAKAIDAYPKATAVL--VRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWS 245 (500)
Q Consensus 183 ~~~l~~~v~~~l~~~~~~~~vl--l~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~ 245 (500)
+.+++.++++.+... ..++ |+|||+++||+|+.+|+.+++.+|++|++++.++++|.+..
T Consensus 138 ~~~~~~~~~~~~~~~---~~~~~ll~~HG~~~~G~~l~eA~~~~~~lE~~a~~~~~~~~~~~~~~ 199 (219)
T COG0235 138 SVELAEALAEAADLA---EAVLKLLRNHGVVAWGKTLAEAVHLAEVLEELAKLQLKALSLGKPLL 199 (219)
T ss_pred chhhHHHHHHHHHHH---HHHHHHHHcCCcEEECCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 888888888877763 4555 99999999999999999999999999999999999998765
No 29
>PRK03634 rhamnulose-1-phosphate aldolase; Provisional
Probab=100.00 E-value=1.5e-40 Score=320.49 Aligned_cols=212 Identities=15% Similarity=0.208 Sum_probs=167.6
Q ss_pred cHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCC---------------------CCccEEEEecCCCCcCCC--
Q 010820 26 AVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIP---------------------KPQQLILMSPSGVQKERM-- 82 (500)
Q Consensus 26 ~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~---------------------~~~~~~~itpsg~~~~~l-- 82 (500)
..+..+++|++++|+++++||+.+++||||+|++++++. ..+++|||||||++++++
T Consensus 5 ~~~~~~~~l~~~~~~l~~~Gl~~~~~GNiSvR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lITpSG~~~~~l~~ 84 (274)
T PRK03634 5 LDSWFVQGMIKVTSDLWLKGWDERNGGNISLRLTEEEVAPYGDDFHQQPRYIPLSQPMPELAGTYFLVTGSGKFFRNVQL 84 (274)
T ss_pred hhHHHHHHHHHHHHHHHHcCCccCCCCeEEEEcCchhhhhhhhccccccccccccccchhccCCEEEEeCCCcChhhhhc
Confidence 346689999999999999999999999999999762100 112489999999999999
Q ss_pred CCC-C--EEEEeCCCCccc---C--CCCCCCCCCCCCCCCChHHHHHHH----hh-C-CccEEEecCchHHHHHHhhcCC
Q 010820 83 EPE-D--MYVLSGNGTTLS---S--PSPKPYPHKPPKCSDCAPLFMKAY----EK-R-DAGAVIHSHGIESCLVTMINPM 148 (500)
Q Consensus 83 ~~~-d--i~~vd~~g~~~~---g--~~~~p~~~~p~~~S~e~~~H~~iy----~~-~-~~~av~H~H~~~~~a~s~~~~~ 148 (500)
+|+ | +++||.+|+.++ | .+.+| |+|+.||+.|| +. | |++||+|+||+|++++|+.+.
T Consensus 85 ~p~dd~~lv~vd~~G~~~~~~~g~~~~~kP--------SsE~~lH~~IY~~~~~~~rpdv~AVvHtHs~~atals~~~~- 155 (274)
T PRK03634 85 DPAANLGVIRIDSDGAGYHILWGLTNGGKP--------TSELPAHLMSHIARLKATNGKDRVIMHCHATNLIALTYVLE- 155 (274)
T ss_pred CchhcCCEEEEcCCCCEeeeeccCCCCCCC--------chHHHHHHHHHHHHhhccCCCCcEEEecCchHHHHHHCcCC-
Confidence 554 5 678899998753 3 12344 99999999999 45 8 999999999999999999864
Q ss_pred Cc--ccccc----hhhHhhhhcCCcccCcceeeeeeC-CCCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHH
Q 010820 149 SK--EFRIT----HMEMIKGIKGHGYYDELVVPIIEN-TAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAK 221 (500)
Q Consensus 149 ~~--~~~~~----~~~~~~~~~g~~~~~~~~vp~~~~-~~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~ 221 (500)
.+ .+... ..+....+++ .||++|| .+++.++++.++++|+++ ++|||+|||+++||+|+++||
T Consensus 156 l~~~~~~~~~~~~~~e~~~~~~~-------~i~vvpy~~pgs~eLa~~v~~~l~~~---~avLL~nHGvv~~G~~l~eA~ 225 (274)
T PRK03634 156 LDEAVFTRTLWEMSTECLVVFPD-------GVGIVPWMVPGTDEIGQATAEKMQKH---DLVLWPKHGVFGSGPTLDEAF 225 (274)
T ss_pred cChHhhhhhhhhcCccceeEeCC-------ceeEecCCCCCCHHHHHHHHHHhccC---CEEEEcCCCCeEecCCHHHHH
Confidence 11 11111 1111111222 3999999 569999999999999874 899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCC-CCCCCCCCCcccccc
Q 010820 222 TQAECYHYLFDAAIKLHQLGL-DWSTPNHGPTRNFKL 257 (500)
Q Consensus 222 ~~~~~lE~~a~~~~~a~~~g~-~~~~~~~~~~~~~~~ 257 (500)
.+++.+|++|++++.++++|. +..+ ++++++++..
T Consensus 226 ~~~e~lE~~a~i~l~a~~~G~~~~~l-~~e~l~~l~~ 261 (274)
T PRK03634 226 GLIDTAEKSAEIYVKVLSMGGMKQTI-TDEELIALGE 261 (274)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCC-CHHHHHHHHH
Confidence 999999999999999999996 5554 5557777653
No 30
>TIGR02624 rhamnu_1P_ald rhamnulose-1-phosphate aldolase. Members of this family are the enzyme RhaD, rhamnulose-1-phosphate aldolase.
Probab=100.00 E-value=2.5e-40 Score=317.08 Aligned_cols=210 Identities=17% Similarity=0.219 Sum_probs=168.8
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCC--------------------CCCccEEEEecCCCCcCCCCC---
Q 010820 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSI--------------------PKPQQLILMSPSGVQKERMEP--- 84 (500)
Q Consensus 28 ~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~--------------------~~~~~~~~itpsg~~~~~l~~--- 84 (500)
+.++++|++++|.|+++||+.+++||||+|++++++ ...+++|+|||||+++++|++
T Consensus 7 ~~~~~~i~~~~~~l~~~Gl~~~~~GNiS~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lITpSG~~~~~l~~~~~ 86 (270)
T TIGR02624 7 SPFVQEMIKTTSDLWRLGWDERNGGNISLRLDEEEVAPYLDFHQVPRKIPLKFPAPELANKYFLVTGSGKFFRNVEENPA 86 (270)
T ss_pred HHHHHHHHHHHHHHHHcCCcCCCCCEEEEEcCccccchhhcccccccccccccccccccCCEEEEeCCCCCHHhcccCch
Confidence 568999999999999999999999999999975200 001248999999999999994
Q ss_pred CCE--EEEeCCCCccc------CCCCCCCCCCCCCCCCChHHHHH----HHhhC-CccEEEecCchHHHHHHhhcCCC-c
Q 010820 85 EDM--YVLSGNGTTLS------SPSPKPYPHKPPKCSDCAPLFMK----AYEKR-DAGAVIHSHGIESCLVTMINPMS-K 150 (500)
Q Consensus 85 ~di--~~vd~~g~~~~------g~~~~p~~~~p~~~S~e~~~H~~----iy~~~-~~~av~H~H~~~~~a~s~~~~~~-~ 150 (500)
+|+ ++||.+|+.++ +. .+| |+|+.||+. ||+.| |++||+|+||+|++++|+..... .
T Consensus 87 ~d~~iv~vd~~G~~~~~~~~~~~g-~kP--------SsE~~mH~~v~~~iy~~rpd~~AVvHtHp~~ata~s~~~~~~~~ 157 (270)
T TIGR02624 87 ENLGILRVSEDGASVHLLWGLTDG-GVP--------TSELPAHFMSHIARLKVDPENRVIMHCHATNLIAMTFTHELDEA 157 (270)
T ss_pred hceeEEEECCCCCEEEeeccccCC-CCc--------ChHHHHHHHHHHHHHHhCCCCCEEEccCcHHHHHHHccCcccch
Confidence 686 56899999986 32 356 999999996 68999 99999999999999999986411 1
Q ss_pred c----cccchhhHhhhhcCCcccCcceeeeeeC-CCCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHH
Q 010820 151 E----FRITHMEMIKGIKGHGYYDELVVPIIEN-TAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAE 225 (500)
Q Consensus 151 ~----~~~~~~~~~~~~~g~~~~~~~~vp~~~~-~~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~ 225 (500)
. ++....+....+++ .||++|| .|++.+|++.++++|+++ ++|||+|||+++||+|+++||.++|
T Consensus 158 ~~~~~l~~~~~e~~~~~~~-------~i~vvp~~~pGs~eLA~~v~~~l~~~---~avLL~nHGvva~G~~l~eA~~~~E 227 (270)
T TIGR02624 158 VFTRTLWQMCTECLVVFPD-------GVGIIPWMVPGTNEIGEATAEKMKEH---RLVLWPHHGIFGAGPSLDETFGLIE 227 (270)
T ss_pred hccccccccccchhheeCC-------ccccccCcCCCCHHHHHHHHHHhccC---CEEEEcCCCCeEecCCHHHHHHHHH
Confidence 1 11111122222322 3999999 479999999999999975 8999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCccccc
Q 010820 226 CYHYLFDAAIKLHQLGLDWSTPNHGPTRNFK 256 (500)
Q Consensus 226 ~lE~~a~~~~~a~~~g~~~~~~~~~~~~~~~ 256 (500)
.+|++|++++.++++|.+....++++++++.
T Consensus 228 ~lE~~A~i~~~a~~lg~~~~~L~~e~l~~~~ 258 (270)
T TIGR02624 228 TAEKSAEVYTKVYSQGGVKQTISDEQLIALA 258 (270)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 9999999999999999763445555777664
No 31
>PF00596 Aldolase_II: Class II Aldolase and Adducin N-terminal domain; InterPro: IPR001303 This entry represents the alpha/beta/alpha domain found in class II aldolases and adducin, usually at the N terminus. These proteins form part of a family that includes: rhamnulose-1-phosphate aldolase (4.1.2.19 from EC), L-fuculose phosphate aldolase (4.1.2.17 from EC) [, ] that is involved in the third step in fucose metabolism, L-ribulose- 5-phosphate 4-epimerase (5.1.3.4 from EC) involved in the third step of L-arabinose catabolism, a probable sugar isomerase SgbE, hypothetical proteins and the metazoan adducins which have not been ascribed any enzymatic function but which play a role in cell membrane cytoskeleton organisation. Adducins are members of the Ig superfamily and encode cell surface sialoglycoproteins expressed by cytokine-activated endothelium. This type I membrane protein mediates leukocyte-endothelial cell adhesion and signal transduction, and may play a role in the development of artherosclerosis and rheumatoid arthritis. Adducin is a cell-membrane skeletal protein that was first purified from human erythrocytes and subsequently isolated from bovine brain membranes. Isoforms of this protein have been detected in lung, kidney, testes and liver. Erythrocyte adducin is a 200kDa heterodimer protein, composed of alpha and beta subunits, present at about 30,000 copies per cell. It binds with high affinity to Ca(2+)/calmodulin and is a substrate for protein kinases A and C. Both alpha-adducin and beta-adducin show alternative splicing. Thus, there may be several different heterodimeric or homodimeric forms of adducin, each with a different functional specificity. It is thought to play a role in assembly of the spectrin-actin lattice that underlies the plasma membrane []. Missense mutations in both the alpha- and beta-adducin genes that alter amino acids that are normally phosphorylated have been associated with the regulation of blood pressure in the Milan hypertensive strain (MHS) of rats. Gamma adducin was isolated from human foetal brain []. It shows a high degree of similarity to the alpha and beta adducins.; GO: 0046872 metal ion binding; PDB: 2V9N_B 1GT7_B 2V9O_E 2V9M_B 2V9F_A 2UYV_A 1OJR_A 2V9G_C 2V29_B 2V9I_A ....
Probab=100.00 E-value=8e-40 Score=300.82 Aligned_cols=178 Identities=34% Similarity=0.560 Sum_probs=150.8
Q ss_pred HHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCC-CCcccC-C-CCCCCCCC
Q 010820 32 VLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGN-GTTLSS-P-SPKPYPHK 108 (500)
Q Consensus 32 ~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~-g~~~~g-~-~~~p~~~~ 108 (500)
++|++++|+++++||+.+++||||+|++++ .|||||||.++++++++||++||++ |++++| . ..+|
T Consensus 1 ~~l~~~~r~l~~~g~~~~~~GniS~R~~~~-------~~lit~sg~~~~~l~~~d~~~v~~~~g~~l~g~~~~~~p---- 69 (184)
T PF00596_consen 1 QELAEACRRLYERGLVDGTGGNISVRVPGD-------RFLITPSGVDKDELTPEDIVVVDLDDGNILEGDEGGGKP---- 69 (184)
T ss_dssp HHHHHHHHHHHHTTSSCTTBEEEEEEECTT-------EEEEEBTTS-GGGCTGGGEEEEETTTSEEEEESTTSSCB----
T ss_pred CHHHHHHHHHHHCCCcccCCCeEEEEecCC-------CEEEcCCCCChhhCChhhceEEeccccceeeccCCCCCC----
Confidence 689999999999999999999999999874 8999999999999999999999999 999965 1 2344
Q ss_pred CCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhh-cCCCcccccchhhHhhhhcCCcccCcceeeeeeCC-CCchh
Q 010820 109 PPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMI-NPMSKEFRITHMEMIKGIKGHGYYDELVVPIIENT-AYENE 185 (500)
Q Consensus 109 p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~vp~~~~~-~~~~~ 185 (500)
|+|+.+|..|||+| |++||+|+||++++++|+. +. +++...++....+.+. .||++||. +++.+
T Consensus 70 ----s~e~~lH~~iy~~rpdv~aViH~H~~~~~a~s~~~~~---~l~~~~~~~~~~~~~~------~v~~~~~~~~~~~~ 136 (184)
T PF00596_consen 70 ----SSETPLHAAIYRARPDVNAVIHTHPPYATALSCLAGE---PLPPITQEAARFYFGG------EVPVVPYAPPGSEE 136 (184)
T ss_dssp ----CTTHHHHHHHHHHCTTSSEEEEE--HHHHHHHTSSTC---CCCSSSHHHHHTHTSS------CEEEE-THSTTCHH
T ss_pred ----CHhHHHHhHHHcCCCCCCEEEecChHHHHhHHhhhhc---ccccchhhHHhhhcCc------cceeeccccccchh
Confidence 99999999999999 9999999999999999988 64 3443344444322121 49999995 58999
Q ss_pred HHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHH
Q 010820 186 LTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAI 235 (500)
Q Consensus 186 l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~ 235 (500)
+++.++++|+. +.+++||+|||+++||+|+++|+.+++.+|++|++++
T Consensus 137 l~~~i~~~l~~--~~~~vll~nHG~~~~G~s~~~A~~~~~~lE~~a~~~l 184 (184)
T PF00596_consen 137 LAEAIAEALGE--DRKAVLLRNHGVVVWGKSLEEAFYRAEYLERAAEIQL 184 (184)
T ss_dssp HHHHHHHHHTC--TSSEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhcC--CceEEeecCCceEEEeCCHHHHHHHHHHHHHHHHHhC
Confidence 99999999992 3699999999999999999999999999999999986
No 32
>KOG2631 consensus Class II aldolase/adducin N-terminal domain protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.3e-33 Score=243.54 Aligned_cols=210 Identities=58% Similarity=1.001 Sum_probs=192.7
Q ss_pred HHhhccHHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCC
Q 010820 21 YLEGRAVKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSP 100 (500)
Q Consensus 21 ~~~~~~~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~ 100 (500)
+..+++.++.+.-|.++||.+|..||+.|+||-||++.++ .++|.|||+.+++++|+|+.++|++++.+..+
T Consensus 11 ~i~~~~~~~p~~Li~eLc~qFY~lgWvtGTGgai~ik~~~--------ei~iaPSgVQKErm~peDlfv~~~~~~~~~~P 82 (238)
T KOG2631|consen 11 RIGSMDLEHPRNLICELCRQFYHLGWVTGTGGAISIKHGD--------EIYIAPSGVQKERMQPEDLFVMDLNTEYISVP 82 (238)
T ss_pred cccCCCccchHHHHHHHHHHHHhcCceeccCCeEEEeeCC--------eeEeCcchhhhhhCCccceEEEecCCceeccC
Confidence 5677888888999999999999999999999999999988 69999999999999999999999999777653
Q ss_pred CCCCCCCCCCCCCCChHHHHHHHhhCCccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcC--Cc----ccCccee
Q 010820 101 SPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKG--HG----YYDELVV 174 (500)
Q Consensus 101 ~~~p~~~~p~~~S~e~~~H~~iy~~~~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g--~~----~~~~~~v 174 (500)
+..++.++|..+++..++|..|++.||||||+..++..+++.. .+.+..++.|+++++.+ .+ |++...|
T Consensus 83 ----~~~k~~k~s~CtpLF~~~y~~r~AgAvIHTHS~~Avl~t~L~~-~~~F~ith~EmIKgI~~~~~g~~~~y~D~L~v 157 (238)
T KOG2631|consen 83 ----KPSKKLKPSQCTPLFMAAYTMRDAGAVIHTHSQAAVLATLLFP-SDEFRITHQEMIKGIPKGNSGGYLPYFDTLVV 157 (238)
T ss_pred ----CCcCCCCccccHHHHHHHHHhcCCceEEEeccHHHHHHHhhcc-cceeEeehHHHHhcCCCCCCCccccccceEEE
Confidence 3345667799999999999999999999999999999999975 46899999999997765 33 7788889
Q ss_pred eeeeCCCCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 010820 175 PIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLD 243 (500)
Q Consensus 175 p~~~~~~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~ 243 (500)
|++++.|...+|.+.+.+++..+|+.-|||+||||+++||.|.+.|.-..|..|++.++.+.-+++|.+
T Consensus 158 PIIeNt~~E~~L~D~l~~aie~YP~tcAVLVR~HGvyvWG~TWekaKt~~EcydYLfelaikm~klgip 226 (238)
T KOG2631|consen 158 PIIENTPSESDLKDSLKKAIELYPDTCAVLVRRHGVYVWGPTWEKAKTMTECYDYLFELAIKMKKLGIP 226 (238)
T ss_pred eeecCCchHHHHHHHHHHHHHhCCcceEEEEecCcEEEecCcHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999976
No 33
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.95 E-value=3.5e-27 Score=220.76 Aligned_cols=212 Identities=41% Similarity=0.693 Sum_probs=169.3
Q ss_pred ceEEEEecCCcccccccccccchHhHHhhhhhhhccccCchhhHHHHHHHHHHHhh----hhhhhccccccCCCC-CCCh
Q 010820 284 PRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVED----DLKQGVAGAVPIPPG-DAGK 358 (500)
Q Consensus 284 ~k~vlFD~DGTL~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~ 358 (500)
+++|+||+.||+.++++++|++|+++.+++..++..+|..+ ..+.++...+. .....+...+..+.. ..++
T Consensus 1 ~~~~l~diegt~~~isfv~~~lfpy~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~d~k~~~lk 76 (220)
T TIGR01691 1 IKNVLLDIEGTTGSISFVHDVLFPYAASRLESFVNDNYEST----IVENLRELGKTPEELILLRKLHAEMDKDRKATPLK 76 (220)
T ss_pred CCEEEEecCCCcccHHHHHhhhhHHHHHHHHHHHHHhCCCH----HHHHHHHhccCCcHHHHHHHHHHHHHcCCCcchHH
Confidence 47999999999999999999999999999999998887654 23333332211 111122222222222 2233
Q ss_pred hh-HHHHHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHH
Q 010820 359 EE-GHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETP 437 (500)
Q Consensus 359 ~~-~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~ 437 (500)
.. +..|++.|.++..+.++|||+.++|++|+++|++++|+||++...+...+++++.+++.++|+.+|+.....||+|+
T Consensus 77 ~lqg~iw~~~Y~~~~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~ 156 (220)
T TIGR01691 77 TLQGLIWRQGYESGELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQ 156 (220)
T ss_pred HHHHHHHHHHHhcCCcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeCcccCCCHH
Confidence 33 78899999988878899999999999999999999999999999999999887656788889998877667899999
Q ss_pred HHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCC-CC-ceeeCCccCC
Q 010820 438 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPEN-HG-FKTINSFAEI 500 (500)
Q Consensus 438 ~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~-~~-~~~i~~l~el 500 (500)
+|.+++++++++ |++|+||||+..|+++|+++||.++++.|+++.+.... .. .-.|+||.++
T Consensus 157 ~y~~i~~~lgv~-p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g~~~~~~~~~~~~~~~~~~~~~ 220 (220)
T TIGR01691 157 SYVKIAGQLGSP-PREILFLSDIINELDAARKAGLHTGQLVRPGNDPVVDPSFPVYPQFPDLNAV 220 (220)
T ss_pred HHHHHHHHhCcC-hhHEEEEeCCHHHHHHHHHcCCEEEEEECCCCCCCCcccCCCCCeecCcccC
Confidence 999999999998 99999999999999999999999999999876544333 22 6778888764
No 34
>PRK08324 short chain dehydrogenase; Validated
Probab=99.95 E-value=5.7e-28 Score=264.43 Aligned_cols=198 Identities=18% Similarity=0.159 Sum_probs=153.1
Q ss_pred HHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCC-CCCccEEEEecCCCCcCCCCCCCEEEEeCCC------------
Q 010820 28 KETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSI-PKPQQLILMSPSGVQKERMEPEDMYVLSGNG------------ 94 (500)
Q Consensus 28 ~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~-~~~~~~~~itpsg~~~~~l~~~di~~vd~~g------------ 94 (500)
+++++.+....+...+.||+.+++||+|+|+.+..+ +...+.|||||||.++++|+++||+.||+++
T Consensus 14 ~~~~~~v~~~~~l~~~~~l~~~~gGN~S~k~~~~~~~g~~~~~~~it~SG~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~ 93 (681)
T PRK08324 14 DELALLVYRSRLLGADPRLVNHGGGNTSVKTTETDLTGEPVEVLWVKGSGGDLATITAAGFAALRLDPLRALKELGVLSD 93 (681)
T ss_pred cHHHHHHHHHHHhCCCHHHhccCCceeeeeeeccccCCCeeeEEEEECCccChhhccccCCCeeeHHHHHhhhccCCcch
Confidence 556666666666667778999999999999854211 1223479999999999999999999999873
Q ss_pred ----------CcccCCCCCCCCCCCCCCCCChHHHHHHHhhCCccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhc
Q 010820 95 ----------TTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIK 164 (500)
Q Consensus 95 ----------~~~~g~~~~p~~~~p~~~S~e~~~H~~iy~~~~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~ 164 (500)
....|. .+| |+|+.||..||+ ++|+||||+|++++|+... ..++... .++
T Consensus 94 ~~~~~~~~~~~~~~~~-~~p--------S~e~~lH~~i~~----~~V~HtH~~~~~a~s~~~~---~~~~~~~----~~~ 153 (681)
T PRK08324 94 DEMVAYLRHCLFDPNA-PAP--------SIETLLHAFLPF----KHVDHTHPDAIIAIANAPD---GEELTRE----IFG 153 (681)
T ss_pred HHHHHHHHhhccCCCC-CCC--------chhHHHHhhcCC----CEEEecCchHHHHHHcCCC---HHHHHHH----HcC
Confidence 222222 233 999999999986 4699999999999999853 2222111 122
Q ss_pred CCcccCcceeeeeeCCCCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhc--CC
Q 010820 165 GHGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQL--GL 242 (500)
Q Consensus 165 g~~~~~~~~vp~~~~~~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~--g~ 242 (500)
+ .|+++||.....+|++.+.+.+++.++.+++||+|||+++||+|+++||.+++.+|++|++++.+++. |+
T Consensus 154 ~-------~v~~~py~~pg~~l~~~~~~~~~~~~~~~~~lL~nHG~~~~G~~~~eA~~~~~~~e~~a~~~~~a~~~~~g~ 226 (681)
T PRK08324 154 D-------RVGWVPYVRPGFDLALAIAEAVRANPGAEGVVLGKHGLFTWGDTAKEAYERTIEIITRAEEYIEARGAGFGG 226 (681)
T ss_pred C-------ceEEcCccCCChHHHHHHHHHHHhCCCCcEEEECCCCCeeccCCHHHHHHHHHHHHHHHHHHHHHhccccCC
Confidence 2 39999995433789999999999877789999999999999999999999999999999999999988 55
Q ss_pred CC--CCCCCCCcc
Q 010820 243 DW--STPNHGPTR 253 (500)
Q Consensus 243 ~~--~~~~~~~~~ 253 (500)
+. .++.+ +.+
T Consensus 227 ~~~~~l~~~-~~~ 238 (681)
T PRK08324 227 AVYEALPAP-ERR 238 (681)
T ss_pred ccccCCCch-hHH
Confidence 43 44443 443
No 35
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.94 E-value=4.9e-27 Score=255.74 Aligned_cols=185 Identities=18% Similarity=0.118 Sum_probs=149.7
Q ss_pred HHHHHHHHHHHHHcCCccccCCceeEEeCCC-CC-CCCccEEEEecCCCCcCCCCCCCEEEEeCCC--------------
Q 010820 31 RVLISELCRHFYTLGWVSGTGGSITIKVHDD-SI-PKPQQLILMSPSGVQKERMEPEDMYVLSGNG-------------- 94 (500)
Q Consensus 31 ~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~-~~-~~~~~~~~itpsg~~~~~l~~~di~~vd~~g-------------- 94 (500)
++.+...++..+++||+.+++||+|+|+.++ |+ ..+.+.|||||||.++++|+++||+.||+++
T Consensus 2 ~~~v~~s~~~g~~~~l~~~~gGN~Svk~~~~~~~~g~~~~~~~I~~SG~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~ 81 (676)
T TIGR02632 2 AELVYRSNLLGADRRITNYGGGNTSAKTTETDPLTGGEVEVMWVKGSGGDLGTMTAANFAGLRLDKLRPLKERYPGVETE 81 (676)
T ss_pred HHHHHHHHHhCCCHHHhccCCccceeeccccCCCcCceeeEEEEECCccCHhhccccCCceEechHHHHHhhhccccCCH
Confidence 5678888999999999999999999998652 12 1122379999999999999999999999984
Q ss_pred ----------CcccCCCCCCCCCCCCCCCCChHHHHHHHhhCCccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhc
Q 010820 95 ----------TTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIK 164 (500)
Q Consensus 95 ----------~~~~g~~~~p~~~~p~~~S~e~~~H~~iy~~~~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~ 164 (500)
...++. .+| |+|+.||+.||. ++|.||||++++++++... ..+ +++.+.
T Consensus 82 ~~~v~~~~~~~~~~~~-~~P--------S~Et~lH~~i~~----~~v~HtH~~~~~a~a~~~~---~~~-----~~~~~~ 140 (676)
T TIGR02632 82 DEMVAYLPHCLFNLNG-RAP--------SIDTPLHAFVPF----KHVDHMHPDAIIALACAEN---GRE-----LTEEIF 140 (676)
T ss_pred HHHHHHHHhcccCCCC-CCC--------CccHHHHhhccc----ceEEecCchHHHHHhcCcc---HHH-----HHHHHc
Confidence 333332 234 999999999975 5677999999999998753 122 222222
Q ss_pred CCcccCcceeeeeeCCCCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 010820 165 GHGYYDELVVPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGL 242 (500)
Q Consensus 165 g~~~~~~~~vp~~~~~~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~ 242 (500)
|. .|+++||.....+|++.+.+.++.+|+.++|||+|||+++||+|+++||.+++.+|+.|++++.+...|.
T Consensus 141 g~------~v~~vpy~~pG~~La~~~~~~~~~~~~~~~vll~~HGl~~~G~~~~eA~~~~~~~e~~a~~~~~~~~~g~ 212 (676)
T TIGR02632 141 GD------EVVWVPWRRPGFQLGLDIAAQVDANPQAKGVVLEGHGLVVWGDTAKECYERTLSIINEAEQFIEEKRGGE 212 (676)
T ss_pred CC------eEEEeccccCChHHHHHHHHHHHhCCCCcEEEEcCCCeEEecCCHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 21 3899999543357999999999987777999999999999999999999999999999999999998876
No 36
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.94 E-value=2.8e-26 Score=220.91 Aligned_cols=206 Identities=13% Similarity=0.074 Sum_probs=142.8
Q ss_pred CCCceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCCh
Q 010820 281 GLFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGK 358 (500)
Q Consensus 281 ~~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (500)
..++++|+|||||||+ |+...+ +++.+...++.....+ .......+...+....+.+...+..... ...
T Consensus 19 ~~~~k~viFDlDGTLi------Ds~~~~~~a~~~~~~~~g~~~g~~--~~~~~~~~~~~G~~~~~~~~~~~~~~~~-~~~ 89 (248)
T PLN02770 19 LAPLEAVLFDVDGTLC------DSDPLHYYAFREMLQEINFNGGVP--ITEEFFVENIAGKHNEDIALGLFPDDLE-RGL 89 (248)
T ss_pred cCccCEEEEcCCCccC------cCHHHHHHHHHHHHHHhccccCCC--CCHHHHHHHcCCCCHHHHHHHHcCcchh-hHH
Confidence 4457999999999999 554333 4555554443210000 0011112233344444333333321111 111
Q ss_pred hhHHHHHHhhccc-CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCC
Q 010820 359 EEGHIWRTGFESN-ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRE 435 (500)
Q Consensus 359 ~~~~~~~~~~~~~-~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~ 435 (500)
.....+...|... .....++||+.++|+.|+++|++++|+||+....+...++++ ++.++|+.++ +.....||+
T Consensus 90 ~~~~~~~~~y~~~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~---gl~~~Fd~iv~~~~~~~~KP~ 166 (248)
T PLN02770 90 KFTDDKEALFRKLASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLL---GLSDFFQAVIIGSECEHAKPH 166 (248)
T ss_pred HHHHHHHHHHHHHHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHc---CChhhCcEEEecCcCCCCCCC
Confidence 1122233344432 234679999999999999999999999999999999999999 7788888777 445678999
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCC-CCceeeCCccC
Q 010820 436 TPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPEN-HGFKTINSFAE 499 (500)
Q Consensus 436 p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~-~~~~~i~~l~e 499 (500)
|++|.+++++++++ |++|+||||+..|+++|+++|+.+|++.++.....+.. .++++|+++.|
T Consensus 167 p~~~~~a~~~~~~~-~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 167 PDPYLKALEVLKVS-KDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYED 230 (248)
T ss_pred hHHHHHHHHHhCCC-hhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchh
Confidence 99999999999998 99999999999999999999999999998754333333 34899999886
No 37
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.93 E-value=1.3e-25 Score=212.30 Aligned_cols=202 Identities=22% Similarity=0.245 Sum_probs=152.0
Q ss_pred CCceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCChh
Q 010820 282 LFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKE 359 (500)
Q Consensus 282 ~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (500)
|+++.|+||+||||+ |+...+ +++.....++.. ....+.++...+......+...+.....+....
T Consensus 2 ~~~~~iiFDlDGTL~------Ds~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~ 69 (220)
T COG0546 2 MMIKAILFDLDGTLV------DSAEDILRAFNAALAELGLP------PLDEEEIRQLIGLGLDELIERLLGEADEEAAAE 69 (220)
T ss_pred CCCCEEEEeCCCccc------cChHHHHHHHHHHHHHcCCC------CCCHHHHHHHhcCCHHHHHHHHhccccchhHHH
Confidence 568999999999999 665544 556666666554 123455666666666655554443222211111
Q ss_pred hHHH----HHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCC
Q 010820 360 EGHI----WRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNK 433 (500)
Q Consensus 360 ~~~~----~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~K 433 (500)
.... |...+.... ...+|||+.++|..|+++|++++|+||.+.......++++ ++..+|+..+ +.....|
T Consensus 70 ~~~~~~~~~~~~~~~~~-~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~---gl~~~F~~i~g~~~~~~~K 145 (220)
T COG0546 70 LVERLREEFLTAYAELL-ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKAL---GLADYFDVIVGGDDVPPPK 145 (220)
T ss_pred HHHHHHHHHHHHHHhhc-cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHh---CCccccceEEcCCCCCCCC
Confidence 1223 333333222 3579999999999999999999999999999999999999 6778887777 4467789
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCC-CCCCCCC-CceeeCCccCC
Q 010820 434 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGN-GPLPENH-GFKTINSFAEI 500 (500)
Q Consensus 434 P~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~-~~~~~~~-~~~~i~~l~el 500 (500)
|+|..+..++++++++ |++++||||+.+|+++|+++|+.++++.|++. ...+... ++++++++.||
T Consensus 146 P~P~~l~~~~~~~~~~-~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el 213 (220)
T COG0546 146 PDPEPLLLLLEKLGLD-PEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAEL 213 (220)
T ss_pred cCHHHHHHHHHHhCCC-hhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHH
Confidence 9999999999999998 99999999999999999999999999999864 3344444 49999998774
No 38
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.93 E-value=1.5e-25 Score=213.44 Aligned_cols=203 Identities=19% Similarity=0.209 Sum_probs=143.0
Q ss_pred CCceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCChh
Q 010820 282 LFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKE 359 (500)
Q Consensus 282 ~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (500)
.++|+|+||+||||+ |+...+ +++.+.+.++.... ..+.++...+.+....+...+..........
T Consensus 10 ~~~k~viFD~DGTL~------Ds~~~~~~a~~~~~~~~g~~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 77 (229)
T PRK13226 10 RFPRAVLFDLDGTLL------DSAPDMLATVNAMLAARGRAPI------TLAQLRPVVSKGARAMLAVAFPELDAAARDA 77 (229)
T ss_pred ccCCEEEEcCcCccc------cCHHHHHHHHHHHHHHCCCCCC------CHHHHHHHhhhHHHHHHHHHhccCChHHHHH
Confidence 356999999999999 554433 55555555554311 1233444444444443333222111111111
Q ss_pred hHHHHHHhhccc-CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCH
Q 010820 360 EGHIWRTGFESN-ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRET 436 (500)
Q Consensus 360 ~~~~~~~~~~~~-~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p 436 (500)
....|.+.|... ....+++||+.++|+.|+++|++++|+||+....+...++++ ++..+|+.++ +.....||+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~KP~p 154 (229)
T PRK13226 78 LIPEFLQRYEALIGTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQL---GWEQRCAVLIGGDTLAERKPHP 154 (229)
T ss_pred HHHHHHHHHHHhhhhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc---CchhcccEEEecCcCCCCCCCH
Confidence 133445555433 223679999999999999999999999999999999999998 5667777655 3345689999
Q ss_pred HHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCC-C-CCCCC-CCceeeCCccCC
Q 010820 437 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGN-G-PLPEN-HGFKTINSFAEI 500 (500)
Q Consensus 437 ~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~-~-~~~~~-~~~~~i~~l~el 500 (500)
++|.+++++++++ |++|+||||+.+|+++|+++|+.+|++.|+.. . ..... .++++++++.||
T Consensus 155 ~~~~~~~~~l~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el 220 (229)
T PRK13226 155 LPLLVAAERIGVA-PTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLL 220 (229)
T ss_pred HHHHHHHHHhCCC-hhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHH
Confidence 9999999999998 99999999999999999999999999998843 2 22222 349999998764
No 39
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.93 E-value=1.5e-25 Score=211.40 Aligned_cols=199 Identities=15% Similarity=0.097 Sum_probs=141.6
Q ss_pred CCceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCChh
Q 010820 282 LFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKE 359 (500)
Q Consensus 282 ~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (500)
|++++|+||+||||+ |+...+ +++.+...++.... ..+.+....+....+.+..+. ......
T Consensus 1 m~~~~viFD~DGTL~------ds~~~~~~a~~~~~~~~~~~~~------~~~~~~~~~G~~~~~~~~~~~----~~~~~~ 64 (214)
T PRK13288 1 MKINTVLFDLDGTLI------NTNELIISSFLHTLKTYYPNQY------KREDVLPFIGPSLHDTFSKID----ESKVEE 64 (214)
T ss_pred CCccEEEEeCCCcCc------cCHHHHHHHHHHHHHHhCCCCC------CHHHHHHHhCcCHHHHHHhcC----HHHHHH
Confidence 468999999999999 554333 44444443332100 122344445554444333321 111111
Q ss_pred hHHHHHHhhccc-CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCH
Q 010820 360 EGHIWRTGFESN-ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRET 436 (500)
Q Consensus 360 ~~~~~~~~~~~~-~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p 436 (500)
....|...+... .....++||+.++|+.|+++|++++|+||+....+..+++.+ ++..+|+.++ +.....||+|
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~---gl~~~f~~i~~~~~~~~~Kp~p 141 (214)
T PRK13288 65 MITTYREFNHEHHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLT---GLDEFFDVVITLDDVEHAKPDP 141 (214)
T ss_pred HHHHHHHHHHHhhhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---CChhceeEEEecCcCCCCCCCc
Confidence 123344433322 234679999999999999999999999999999999999999 6788888777 4456689999
Q ss_pred HHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCC-CCCCC-CCCceeeCCccCC
Q 010820 437 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGN-GPLPE-NHGFKTINSFAEI 500 (500)
Q Consensus 437 ~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~-~~~~~-~~~~~~i~~l~el 500 (500)
++|.+++++++++ |++|+||||+.+|+++|+++|+.++++.|+.. ...+. ..++++++++.||
T Consensus 142 ~~~~~~~~~~~~~-~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l 206 (214)
T PRK13288 142 EPVLKALELLGAK-PEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDL 206 (214)
T ss_pred HHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHH
Confidence 9999999999998 99999999999999999999999999999843 32222 2348999998764
No 40
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.93 E-value=2.8e-25 Score=221.66 Aligned_cols=206 Identities=12% Similarity=0.023 Sum_probs=150.8
Q ss_pred CCCCCCceEEEEecCCcccccccccccchHh---HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCC
Q 010820 278 YGSGLFPRCIVLDIEGTTTPISFVSEVLFPY---ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPG 354 (500)
Q Consensus 278 ~~~~~~~k~vlFD~DGTL~~~~~~~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (500)
.+|.-..++|||||||||+ |+.... +++.+...++.... ..+.++...+.+..+.+..++.....
T Consensus 125 ~~~~~~~~~VIFDlDGTLI------DS~~~i~~~a~~~l~~e~G~~~~------~~e~~~~~~G~~~~~~l~~ll~~~~~ 192 (381)
T PLN02575 125 ERMGCGWLGAIFEWEGVII------EDNPDLENQAWLTLAQEEGKSPP------PAFILRRVEGMKNEQAISEVLCWSRD 192 (381)
T ss_pred HhccCCCCEEEEcCcCcce------eCHHHHHHHHHHHHHHHcCCCCC------HHHHHHHhcCCCHHHHHHHHhhccCC
Confidence 3455588999999999999 554322 56666656665421 23344555666655555554432111
Q ss_pred CC-ChhhHHHHHHhhcccC-cccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccc
Q 010820 355 DA-GKEEGHIWRTGFESNE-LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAV 430 (500)
Q Consensus 355 ~~-~~~~~~~~~~~~~~~~-~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~ 430 (500)
.. .......+.+.|.+.. ....++||+.++|+.|+++|++++|+||+.+..+...++++ ++.+||+.++ +...
T Consensus 193 ~~~~e~l~~~~~~~y~~~~~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~l---gL~~yFd~Iv~sddv~ 269 (381)
T PLN02575 193 PAELRRMATRKEEIYQALQGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSI---GIRGFFSVIVAAEDVY 269 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---CCHHHceEEEecCcCC
Confidence 11 1111333444454332 23579999999999999999999999999999999999999 7788898888 4456
Q ss_pred cCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 431 GNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 431 ~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
..||+|++|..++++++++ |++|+||||+..|+++|+++||.+|++.+++.... ...++++|+++.||
T Consensus 270 ~~KP~Peifl~A~~~lgl~-Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~-l~~Ad~iI~s~~EL 337 (381)
T PLN02575 270 RGKPDPEMFIYAAQLLNFI-PERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYE-LGAADLVVRRLDEL 337 (381)
T ss_pred CCCCCHHHHHHHHHHcCCC-cccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhH-hcCCCEEECCHHHH
Confidence 6899999999999999998 99999999999999999999999999987543222 22348899998775
No 41
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.92 E-value=3.3e-25 Score=213.91 Aligned_cols=204 Identities=12% Similarity=0.013 Sum_probs=145.4
Q ss_pred CCCCceEEEEecCCcccccccccccchH---hHHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCC
Q 010820 280 SGLFPRCIVLDIEGTTTPISFVSEVLFP---YARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDA 356 (500)
Q Consensus 280 ~~~~~k~vlFD~DGTL~~~~~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (500)
-.-.+|+|||||||||+ |+... .+++.+...++..+. ..+.++...+......+...+.......
T Consensus 20 ~~~~~k~vIFDlDGTLv------DS~~~~~~~a~~~~~~~~G~~~~------~~e~~~~~~G~~~~~~~~~l~~~~~~~~ 87 (260)
T PLN03243 20 LGCGWLGVVLEWEGVIV------EDDSELERKAWRALAEEEGKRPP------PAFLLKRAEGMKNEQAISEVLCWSRDFL 87 (260)
T ss_pred hcCCceEEEEeCCCcee------CCchHHHHHHHHHHHHHcCCCCC------HHHHHHHhcCCCHHHHHHHHhccCCCHH
Confidence 34568999999999999 66422 256666666665422 1233444555555444444332111110
Q ss_pred -ChhhHHHHHHhhccc-CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccC
Q 010820 357 -GKEEGHIWRTGFESN-ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGN 432 (500)
Q Consensus 357 -~~~~~~~~~~~~~~~-~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~ 432 (500)
.......+...+... .....++||+.++|+.|+++|++++|+||+....+..+++++ ++.++|+.++ +.....
T Consensus 88 ~~~~l~~~~~~~~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~---gl~~~Fd~ii~~~d~~~~ 164 (260)
T PLN03243 88 QMKRLAIRKEDLYEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAV---GMEGFFSVVLAAEDVYRG 164 (260)
T ss_pred HHHHHHHHHHHHHHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHc---CCHhhCcEEEecccCCCC
Confidence 011122233333221 223578999999999999999999999999999999999999 6788888877 445668
Q ss_pred CCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 433 KRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 433 KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
||+|++|..++++++++ |++|+||||+..|+++|+++||.+|++.+...... ...++++|+++.||
T Consensus 165 KP~Pe~~~~a~~~l~~~-p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~-l~~ad~vi~~~~el 230 (260)
T PLN03243 165 KPDPEMFMYAAERLGFI-PERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYE-LSAGDLVVRRLDDL 230 (260)
T ss_pred CCCHHHHHHHHHHhCCC-hHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhh-hccCCEEeCCHHHH
Confidence 99999999999999998 99999999999999999999999999974333222 22348899988764
No 42
>PRK11587 putative phosphatase; Provisional
Probab=99.92 E-value=9.6e-25 Score=206.40 Aligned_cols=196 Identities=18% Similarity=0.192 Sum_probs=134.3
Q ss_pred CCceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCChh
Q 010820 282 LFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKE 359 (500)
Q Consensus 282 ~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (500)
|++|+|+||+||||+ |+...+ +++.+...++.. .. +......+......++.+.. .... ..
T Consensus 1 M~~k~viFDlDGTL~------Ds~~~~~~a~~~~~~~~g~~------~~--~~~~~~~g~~~~~~~~~~~~-~~~~--~~ 63 (218)
T PRK11587 1 MRCKGFLFDLDGTLV------DSLPAVERAWSNWADRHGIA------PD--EVLNFIHGKQAITSLRHFMA-GASE--AE 63 (218)
T ss_pred CCCCEEEEcCCCCcC------cCHHHHHHHHHHHHHHcCCC------HH--HHHHHHcCCCHHHHHHHHhc-cCCc--HH
Confidence 468999999999999 654433 556666555543 11 11122223333333333221 1111 11
Q ss_pred hHHHHHH--hhc-ccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCC
Q 010820 360 EGHIWRT--GFE-SNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKR 434 (500)
Q Consensus 360 ~~~~~~~--~~~-~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP 434 (500)
....+.. .+. .......++||+.++|+.|+++|++++|+||+........++.. ++ .+|+.++ +.....||
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~---~l-~~~~~i~~~~~~~~~KP 139 (218)
T PRK11587 64 IQAEFTRLEQIEATDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAA---GL-PAPEVFVTAERVKRGKP 139 (218)
T ss_pred HHHHHHHHHHHHHhhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhc---CC-CCccEEEEHHHhcCCCC
Confidence 1122222 111 12334679999999999999999999999999988888888777 33 2344444 34556799
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 435 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
+|++|..++++++++ |++|+||||+..|+++|+++|+.+|++.++..... ...++++++++.||
T Consensus 140 ~p~~~~~~~~~~g~~-p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~-~~~~~~~~~~~~el 203 (218)
T PRK11587 140 EPDAYLLGAQLLGLA-PQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPR-LDEVDLVLHSLEQL 203 (218)
T ss_pred CcHHHHHHHHHcCCC-cccEEEEecchhhhHHHHHCCCEEEEECCCCchhh-hccCCEEecchhhe
Confidence 999999999999998 99999999999999999999999999987643222 22348999998875
No 43
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.92 E-value=1.5e-24 Score=205.69 Aligned_cols=204 Identities=20% Similarity=0.179 Sum_probs=140.5
Q ss_pred CCCceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhcccccc-CCCCCC-
Q 010820 281 GLFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVP-IPPGDA- 356 (500)
Q Consensus 281 ~~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~- 356 (500)
.+++++|+||+||||+ |+...+ +++.+...++..... .+.+....+............ ..+...
T Consensus 4 ~~~~k~iiFD~DGTL~------d~~~~~~~a~~~~~~~~g~~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 71 (222)
T PRK10826 4 PRQILAAIFDMDGLLI------DSEPLWDRAELDVMASLGVDISR------REELPDTLGLRIDQVVDLWYARQPWNGPS 71 (222)
T ss_pred cccCcEEEEcCCCCCC------cCHHHHHHHHHHHHHHCCCCCCH------HHHHHHhhCCCHHHHHHHHHHhcCCCCCC
Confidence 3458999999999999 543333 555555555543221 122333333222221111111 111111
Q ss_pred ChhhHHHHHHhhccc-CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCC
Q 010820 357 GKEEGHIWRTGFESN-ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNK 433 (500)
Q Consensus 357 ~~~~~~~~~~~~~~~-~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~K 433 (500)
.......+.+.+... .....++||+.++|+.|+++|++++|+||+....+..+++++ ++..+|+.++ +.....|
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~K 148 (222)
T PRK10826 72 RQEVVQRIIARVISLIEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMF---DLRDYFDALASAEKLPYSK 148 (222)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhC---cchhcccEEEEcccCCCCC
Confidence 111122222222221 234679999999999999999999999999999999999998 6777787777 4456789
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCC-CCCceeeCCccCC
Q 010820 434 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPE-NHGFKTINSFAEI 500 (500)
Q Consensus 434 P~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~-~~~~~~i~~l~el 500 (500)
|+|++|+.++++++++ |++|+||||+.+|+++|+++|+++|++.++....... ..++++++++.||
T Consensus 149 p~~~~~~~~~~~~~~~-~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl 215 (222)
T PRK10826 149 PHPEVYLNCAAKLGVD-PLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTEL 215 (222)
T ss_pred CCHHHHHHHHHHcCCC-HHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHH
Confidence 9999999999999998 9999999999999999999999999999875443222 2348899998775
No 44
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.92 E-value=2.5e-24 Score=202.75 Aligned_cols=198 Identities=18% Similarity=0.210 Sum_probs=138.1
Q ss_pred EEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccC---CCCCC-Chhh
Q 010820 287 IVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPI---PPGDA-GKEE 360 (500)
Q Consensus 287 vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~ 360 (500)
|+||+||||+ |+...+ +++.+...++.... ..+.+....+......+...+.. ..... ....
T Consensus 1 viFD~DGTL~------Ds~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (213)
T TIGR01449 1 VLFDLDGTLV------DSAPDIAAAVNMALAALGLPPA------TLARVIGFIGNGVPVLMERVLAWAGQEPDAQRVAEL 68 (213)
T ss_pred CeecCCCccc------cCHHHHHHHHHHHHHHCCCCCC------CHHHHHHHhcccHHHHHHHHhhccccccChHHHHHH
Confidence 6999999999 554433 44444444444211 11223333444333332332221 11111 1111
Q ss_pred HHHHHHhhcccC-cccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHH
Q 010820 361 GHIWRTGFESNE-LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETP 437 (500)
Q Consensus 361 ~~~~~~~~~~~~-~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~ 437 (500)
...|.+.|.... ....++||+.++|+.|+++|++++|+||+....+...++++ ++..+|+.++ +.....||+|+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~~Kp~p~ 145 (213)
T TIGR01449 69 RKLFDRHYEEVAGELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELL---GLAKYFSVLIGGDSLAQRKPHPD 145 (213)
T ss_pred HHHHHHHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---CcHhhCcEEEecCCCCCCCCChH
Confidence 344455555432 24689999999999999999999999999999999999999 6677777766 33556799999
Q ss_pred HHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCC-CCCCC-CCCceeeCCccCC
Q 010820 438 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGN-GPLPE-NHGFKTINSFAEI 500 (500)
Q Consensus 438 ~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~-~~~~~-~~~~~~i~~l~el 500 (500)
+|.+++++++++ |++|+||||+.+|+++|+++|+.++++.++.. ...+. ..++++|+++.||
T Consensus 146 ~~~~~~~~~~~~-~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l 209 (213)
T TIGR01449 146 PLLLAAERLGVA-PQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNEL 209 (213)
T ss_pred HHHHHHHHcCCC-hhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHH
Confidence 999999999998 99999999999999999999999999998743 22332 2348999998764
No 45
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.92 E-value=1.3e-24 Score=210.41 Aligned_cols=124 Identities=17% Similarity=0.130 Sum_probs=105.4
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccc-cccc--cccccCCCCHHHHHHHHHHcCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL-SGFF--DTAVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f-~~~~--d~~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
...++||+.++|+.|+++|++++|+||+....+..+++++ ++.++| +.++ +.....||+|++|.++++++++.+
T Consensus 97 ~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~---gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~ 173 (253)
T TIGR01422 97 YSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEA---ALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYD 173 (253)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHH---HhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999999999999 667774 6555 445678999999999999999933
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCC------------------------CCCCCC-CceeeCCccCC
Q 010820 451 PSEILFVTDVYQEATAAKAAGLEVVISIRPGNG------------------------PLPENH-GFKTINSFAEI 500 (500)
Q Consensus 451 p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~------------------------~~~~~~-~~~~i~~l~el 500 (500)
|++|+||||+.+|+++|+++||.+|++.++... ..+... ++++|+++.||
T Consensus 174 ~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~el 248 (253)
T TIGR01422 174 VAACVKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLKAAGAHYVIDTLAEL 248 (253)
T ss_pred chheEEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHhcCCCEehhcHHHH
Confidence 899999999999999999999999999987531 122233 38999998875
No 46
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.91 E-value=3.8e-24 Score=202.74 Aligned_cols=123 Identities=19% Similarity=0.222 Sum_probs=106.7
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
...++||+.++|+.|+++|++++|+||+....+...++++ ++..+|+.++ +.....||+|++|..++++++++ |
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~-~ 167 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERL---GVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVK-P 167 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhC---ChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCC-h
Confidence 3579999999999999999999999999999999999999 7788888777 44667899999999999999998 9
Q ss_pred CcEEEEeCCH-hhHHHHHHcCCcEEEEcCCCCCC-C-C-CCCCceeeCCccCC
Q 010820 452 SEILFVTDVY-QEATAAKAAGLEVVISIRPGNGP-L-P-ENHGFKTINSFAEI 500 (500)
Q Consensus 452 ~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~-~-~-~~~~~~~i~~l~el 500 (500)
++|+||||+. +|+.+|+++|+.+|++.++.... . . ...++++|+++.||
T Consensus 168 ~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 168 EEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred hhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence 9999999998 89999999999999999874322 1 1 22348999999875
No 47
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.91 E-value=4.6e-24 Score=208.01 Aligned_cols=205 Identities=20% Similarity=0.243 Sum_probs=145.8
Q ss_pred CCCCceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCC-----
Q 010820 280 SGLFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIP----- 352 (500)
Q Consensus 280 ~~~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 352 (500)
+...+|+|+|||||||+ |+...+ +++.+...++.... ..+.++...+.+........+...
T Consensus 9 ~~~~~k~viFDlDGTL~------Ds~~~~~~a~~~~~~~~g~~~~------~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 76 (272)
T PRK13223 9 PGRLPRLVMFDLDGTLV------DSVPDLAAAVDRMLLELGRPPA------GLEAVRHWVGNGAPVLVRRALAGSIDHDG 76 (272)
T ss_pred CCccCCEEEEcCCCccc------cCHHHHHHHHHHHHHHcCCCCC------CHHHHHHHhChhHHHHHHHHhcccccccC
Confidence 34568999999999999 554444 55666666655421 123333444444333333222111
Q ss_pred CCC-CChhhHHHHHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--ccc
Q 010820 353 PGD-AGKEEGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTA 429 (500)
Q Consensus 353 ~~~-~~~~~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~ 429 (500)
..+ ........|.+.|........++||+.++|+.|+++|++++|+||++...+..+++.+ ++..+|+.++ +..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~---~i~~~f~~i~~~d~~ 153 (272)
T PRK13223 77 VDDELAEQALALFMEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQM---KIGRYFRWIIGGDTL 153 (272)
T ss_pred CCHHHHHHHHHHHHHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHc---CcHhhCeEEEecCCC
Confidence 111 1112244455555544344679999999999999999999999999999999999988 5667777666 334
Q ss_pred ccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCC-C-CCCCceeeCCccCC
Q 010820 430 VGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPL-P-ENHGFKTINSFAEI 500 (500)
Q Consensus 430 ~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~-~-~~~~~~~i~~l~el 500 (500)
...||+|++|+.++++++++ |++|+||||+.+|+++|+++|++++++.++..... . ...++++|+++.||
T Consensus 154 ~~~Kp~p~~~~~~~~~~g~~-~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el 225 (272)
T PRK13223 154 PQKKPDPAALLFVMKMAGVP-PSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRAL 225 (272)
T ss_pred CCCCCCcHHHHHHHHHhCCC-hhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHH
Confidence 56799999999999999998 99999999999999999999999999998743322 2 22459999998764
No 48
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.91 E-value=2.7e-24 Score=203.70 Aligned_cols=202 Identities=12% Similarity=0.103 Sum_probs=137.8
Q ss_pred ceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccC-CCCC-CChh
Q 010820 284 PRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPI-PPGD-AGKE 359 (500)
Q Consensus 284 ~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~ 359 (500)
+|+|+||+||||+| +...+ +++.+...++...... +..+.+.+....+.+...+.. .... ....
T Consensus 1 ~k~iiFD~DGTL~d------s~~~~~~~~~~~~~~~g~~~~~~------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 68 (220)
T TIGR03351 1 ISLVVLDMAGTTVD------EDGLVYRALRQAVTAAGLSPTPE------EVQSAWMGQSKIEAIRALLALDGADEAEAQA 68 (220)
T ss_pred CcEEEEecCCCeec------cCchHHHHHHHHHHHcCCCCCHH------HHHHhhcCCCHHHHHHHHHhccCCCHHHHHH
Confidence 58999999999994 43333 4444444555432211 111113343333333333211 1111 1111
Q ss_pred hHHHHHHhhccc--CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccc--ccccccc--cccccCC
Q 010820 360 EGHIWRTGFESN--ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR--KYLSGFF--DTAVGNK 433 (500)
Q Consensus 360 ~~~~~~~~~~~~--~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~--~~f~~~~--d~~~~~K 433 (500)
....|.+.+... ....+++||+.++|+.|+++|++++|+||+....+..+++++ ++. ++|+.++ +.....|
T Consensus 69 ~~~~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~---~l~~~~~f~~i~~~~~~~~~K 145 (220)
T TIGR03351 69 AFADFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKL---GWTVGDDVDAVVCPSDVAAGR 145 (220)
T ss_pred HHHHHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHh---hhhhhccCCEEEcCCcCCCCC
Confidence 123344443322 123589999999999999999999999999999999999999 566 7777766 3345689
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcE-EEEcCCC-CCCCCCCC-CceeeCCccCC
Q 010820 434 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV-VISIRPG-NGPLPENH-GFKTINSFAEI 500 (500)
Q Consensus 434 P~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~-i~v~~~~-~~~~~~~~-~~~~i~~l~el 500 (500)
|+|++|..+++++++.+|++|+||||+..|+++|+++||.+ +++.++. ....+... ++++|+++.+|
T Consensus 146 P~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l 215 (220)
T TIGR03351 146 PAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADL 215 (220)
T ss_pred CCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHH
Confidence 99999999999999963699999999999999999999999 8998874 33333333 38888988764
No 49
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.91 E-value=7.3e-24 Score=206.61 Aligned_cols=106 Identities=17% Similarity=0.109 Sum_probs=93.1
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccc-cccc--cccccCCCCHHHHHHHHHHcCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL-SGFF--DTAVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f-~~~~--d~~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
...++||+.++|+.|+++|++++|+||+....+..+++.+ ++.++| +.++ +.....||+|++|..+++++++.+
T Consensus 99 ~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~---~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~ 175 (267)
T PRK13478 99 YATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLA---AAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYD 175 (267)
T ss_pred cCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHH---hhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCC
Confidence 4679999999999999999999999999999999999888 455553 5554 445668999999999999999963
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCC
Q 010820 451 PSEILFVTDVYQEATAAKAAGLEVVISIRPGN 482 (500)
Q Consensus 451 p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~ 482 (500)
|++|+||||+.+|+++|+++|+.+|++.+++.
T Consensus 176 ~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~ 207 (267)
T PRK13478 176 VAACVKVDDTVPGIEEGLNAGMWTVGVILSGN 207 (267)
T ss_pred CcceEEEcCcHHHHHHHHHCCCEEEEEccCcc
Confidence 69999999999999999999999999998754
No 50
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.91 E-value=8.2e-24 Score=198.11 Aligned_cols=192 Identities=18% Similarity=0.158 Sum_probs=135.8
Q ss_pred EEEecCCcccccccccccchHh--HHhhhhhh-hccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCChhhHHH
Q 010820 287 IVLDIEGTTTPISFVSEVLFPY--ARDNVGKH-LSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKEEGHI 363 (500)
Q Consensus 287 vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (500)
|+||+||||+ |+...+ +++..... .+... ...+.++...+......++. ++... . .. ...
T Consensus 1 iiFDlDGTL~------Ds~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~~~~~-~~~~~--~-~~-~~~ 63 (205)
T TIGR01454 1 VVFDLDGVLV------DSFAVMREAFAIAYREVVGDGP------APFEEYRRHLGRYFPDIMRI-MGLPL--E-ME-EPF 63 (205)
T ss_pred CeecCcCccc------cCHHHHHHHHHHHHHHhcCCCC------CCHHHHHHHhCccHHHHHHH-cCCCH--H-HH-HHH
Confidence 6899999999 665444 44444332 23321 11233444455444443332 22110 0 11 111
Q ss_pred HHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHH
Q 010820 364 WRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVE 441 (500)
Q Consensus 364 ~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~ 441 (500)
+...+ ......+++||+.++|++|+++|++++|+||+....+...++++ ++.++|+.++ +.....||+|++|.+
T Consensus 64 ~~~~~-~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~KP~~~~~~~ 139 (205)
T TIGR01454 64 VRESY-RLAGEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEAL---GLLPLFDHVIGSDEVPRPKPAPDIVRE 139 (205)
T ss_pred HHHHH-HhhcccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHc---CChhheeeEEecCcCCCCCCChHHHHH
Confidence 22222 22335689999999999999999999999999999999999999 6677788777 335568999999999
Q ss_pred HHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCC-CCCCCCC-CCceeeCCccCC
Q 010820 442 ITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPG-NGPLPEN-HGFKTINSFAEI 500 (500)
Q Consensus 442 ~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~-~~~~~~~-~~~~~i~~l~el 500 (500)
++++++++ |++|+||||+.+|+++|+++|++++++.|+. ....+.. .++++++++.||
T Consensus 140 ~~~~~~~~-~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l 199 (205)
T TIGR01454 140 ALRLLDVP-PEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSL 199 (205)
T ss_pred HHHHcCCC-hhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHH
Confidence 99999998 9999999999999999999999999999984 4333333 348999988764
No 51
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.91 E-value=2.2e-23 Score=197.58 Aligned_cols=105 Identities=15% Similarity=0.179 Sum_probs=94.3
Q ss_pred cccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCC
Q 010820 373 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 373 ~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
....++||+.++|+.|+++|++++|+||+....+...++++ ++.++|+.++ +.....||+|++|..++++++++
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~---~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~- 165 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHT---GLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLK- 165 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHC---CcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCC-
Confidence 34679999999999999999999999999999999999998 6788888877 44567899999999999999998
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCcE-EEEcCCC
Q 010820 451 PSEILFVTDVYQEATAAKAAGLEV-VISIRPG 481 (500)
Q Consensus 451 p~~~l~VGDs~~Di~aA~~aG~~~-i~v~~~~ 481 (500)
|++|+||||+..|+++|+++||++ +.+..+.
T Consensus 166 p~~~l~igDs~~di~aA~~aG~~~~~~v~~~~ 197 (224)
T PRK14988 166 AERTLFIDDSEPILDAAAQFGIRYCLGVTNPD 197 (224)
T ss_pred hHHEEEEcCCHHHHHHHHHcCCeEEEEEeCCC
Confidence 999999999999999999999986 5666653
No 52
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.91 E-value=2.2e-23 Score=198.14 Aligned_cols=204 Identities=20% Similarity=0.240 Sum_probs=143.4
Q ss_pred CCCceEEEEecCCcccccccccccchH--hHHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCC---CCC
Q 010820 281 GLFPRCIVLDIEGTTTPISFVSEVLFP--YARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIP---PGD 355 (500)
Q Consensus 281 ~~~~k~vlFD~DGTL~~~~~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 355 (500)
.+++++|+||+||||+ |+... .++..+.+.++.... ....++...+......+...+... ...
T Consensus 3 ~~~~~~iiFD~DGTL~------d~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 70 (226)
T PRK13222 3 FMDIRAVAFDLDGTLV------DSAPDLAAAVNAALAALGLPPA------GEERVRTWVGNGADVLVERALTWAGREPDE 70 (226)
T ss_pred CCcCcEEEEcCCcccc------cCHHHHHHHHHHHHHHCCCCCC------CHHHHHHHhCccHHHHHHHHHhhccCCccH
Confidence 4668999999999999 44322 245555555554311 122233333333333333322211 111
Q ss_pred C-ChhhHHHHHHhhcccCc-ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--ccccc
Q 010820 356 A-GKEEGHIWRTGFESNEL-EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVG 431 (500)
Q Consensus 356 ~-~~~~~~~~~~~~~~~~~-~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~ 431 (500)
. .......|.+.|..... ...++||+.++|+.|+++|++++++||+....+..+++++ ++..+|+.++ +....
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~---~l~~~f~~~~~~~~~~~ 147 (226)
T PRK13222 71 ELLEKLRELFDRHYAENVAGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEAL---GIADYFSVVIGGDSLPN 147 (226)
T ss_pred HHHHHHHHHHHHHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---CCccCccEEEcCCCCCC
Confidence 1 11113445555554332 4679999999999999999999999999999999999999 5677777766 33456
Q ss_pred CCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCC-CCCCC-CCCceeeCCccCC
Q 010820 432 NKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGN-GPLPE-NHGFKTINSFAEI 500 (500)
Q Consensus 432 ~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~-~~~~~-~~~~~~i~~l~el 500 (500)
.||+|++|+.++++++++ |++|+||||+.+|+++|+++|+.+|++.++.. ..... ..++++++++.+|
T Consensus 148 ~kp~~~~~~~~~~~~~~~-~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l 217 (226)
T PRK13222 148 KKPDPAPLLLACEKLGLD-PEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAEL 217 (226)
T ss_pred CCcChHHHHHHHHHcCCC-hhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHH
Confidence 899999999999999998 99999999999999999999999999998743 22222 2348999998764
No 53
>PRK09449 dUMP phosphatase; Provisional
Probab=99.90 E-value=1.6e-23 Score=198.89 Aligned_cols=122 Identities=16% Similarity=0.169 Sum_probs=103.7
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
..++||+.++|+.|+ +|++++|+||+....+...++++ ++.++|+.++ +.....||+|++|..+++++++.+++
T Consensus 94 ~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~---~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 169 (224)
T PRK09449 94 CTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERT---GLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRS 169 (224)
T ss_pred CccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhC---ChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcc
Confidence 569999999999999 68999999999999999999999 6788888887 44566899999999999999986358
Q ss_pred cEEEEeCCH-hhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 453 EILFVTDVY-QEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 453 ~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
+|+||||+. +|+++|+++||+++++.+++........++++|+++.||
T Consensus 170 ~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el 218 (224)
T PRK09449 170 RVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSEL 218 (224)
T ss_pred cEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHH
Confidence 999999998 799999999999999986543222222358999998764
No 54
>PLN02940 riboflavin kinase
Probab=99.90 E-value=3.2e-23 Score=210.95 Aligned_cols=201 Identities=16% Similarity=0.136 Sum_probs=140.1
Q ss_pred CceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccC-CCCCCChh
Q 010820 283 FPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPI-PPGDAGKE 359 (500)
Q Consensus 283 ~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 359 (500)
.+++|+||+||||+ |+...+ +++.+...++..+.. +.+....+......+...+.. ........
T Consensus 10 ~ik~VIFDlDGTLv------Dt~~~~~~a~~~~~~~~G~~~~~-------~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 76 (382)
T PLN02940 10 LVSHVILDLDGTLL------NTDGIVSDVLKAFLVKYGKQWDG-------REAQKIVGKTPLEAAATVVEDYGLPCSTDE 76 (382)
T ss_pred cCCEEEECCcCcCC------cCHHHHHHHHHHHHHHcCCCCCH-------HHHHHhcCCCHHHHHHHHHHHhCCCCCHHH
Confidence 48999999999999 554433 555555555554321 112333333222222221110 11111111
Q ss_pred hHHHHHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHh-ccCcccccccccccc--cccccCCCCH
Q 010820 360 EGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFG-NSNYGDLRKYLSGFF--DTAVGNKRET 436 (500)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~-~~~~~~l~~~f~~~~--d~~~~~KP~p 436 (500)
....+...+........++||+.++|+.|+++|++++|+||+....+...++ .. ++.++|+.++ +.....||+|
T Consensus 77 ~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~---gl~~~Fd~ii~~d~v~~~KP~p 153 (382)
T PLN02940 77 FNSEITPLLSEQWCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQ---GWKESFSVIVGGDEVEKGKPSP 153 (382)
T ss_pred HHHHHHHHHHHHHccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcc---ChHhhCCEEEehhhcCCCCCCH
Confidence 1222333333333356799999999999999999999999999999998887 67 6778888877 4466789999
Q ss_pred HHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 437 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 437 ~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
++|.+++++++++ |++|+||||+..|+++|+++||.+|++.++.........++++++++.||
T Consensus 154 ~~~~~a~~~lgv~-p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el 216 (382)
T PLN02940 154 DIFLEAAKRLNVE-PSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDL 216 (382)
T ss_pred HHHHHHHHHcCCC-hhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHhHc
Confidence 9999999999998 99999999999999999999999999998743332222348899998775
No 55
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=99.90 E-value=2.4e-23 Score=179.46 Aligned_cols=214 Identities=41% Similarity=0.724 Sum_probs=184.5
Q ss_pred ceEEEEecCCcccccccccccchHhHHhhhhhhhccccCchhhHHHHHHHHHHHhhhh-hh-hccccccC---CC-CCCC
Q 010820 284 PRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDL-KQ-GVAGAVPI---PP-GDAG 357 (500)
Q Consensus 284 ~k~vlFD~DGTL~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~---~~-~~~~ 357 (500)
.|+|+.|+.||.-.++|+.|.+|+++.+++.++...++..++......+++...+... .+ ....++.+ +. ...+
T Consensus 4 ~kaiLlDIEGTv~~iSFVkdvlFPYa~~~lp~fv~e~~e~~~v~~~v~~v~~e~g~~~s~E~lva~~~~wiaed~K~t~l 83 (229)
T COG4229 4 VKAILLDIEGTVSPISFVKDVLFPYAARKLPDFVRENTEDSEVKKIVDEVLSEFGIANSEEALVALLLEWIAEDSKDTPL 83 (229)
T ss_pred hhhheeeccccccchhHHHhhhhHHHHHHhHHHHHhhccCChhhHHHHHHHHHhCccchHHHHHHHHHHHHhcccccchH
Confidence 5899999999999999999999999999999999999988877777777777776543 22 22222111 11 1222
Q ss_pred hhh-HHHHHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCH
Q 010820 358 KEE-GHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRET 436 (500)
Q Consensus 358 ~~~-~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p 436 (500)
+.. +..|.+.|+++..+.++||++.+.|+++++.|++++|.|+++...|...+.+...++|..+|+++||+..+.|...
T Consensus 84 K~lQG~iWa~Gy~sgelkahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDttiG~KrE~ 163 (229)
T COG4229 84 KALQGMIWAHGYESGELKAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTTIGKKRES 163 (229)
T ss_pred HHHHhHHHHhccccCccccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeeccccccccc
Confidence 222 8999999999999999999999999999999999999999999999999999988899999999999988899999
Q ss_pred HHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCcc
Q 010820 437 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFA 498 (500)
Q Consensus 437 ~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~ 498 (500)
..|.++++..|++ |.+++|+.|.+..+.+|+.+||.++++.|+++.+-.......+++||.
T Consensus 164 ~SY~kIa~~iGl~-p~eilFLSDn~~EL~AA~~vGl~t~l~~R~g~~P~~d~~~~~~~~sf~ 224 (229)
T COG4229 164 QSYAKIAGDIGLP-PAEILFLSDNPEELKAAAGVGLATGLAVRPGNAPVPDGQGFLVYKSFE 224 (229)
T ss_pred hhHHHHHHhcCCC-chheEEecCCHHHHHHHHhcchheeeeecCCCCCCCCCcCceeeechh
Confidence 9999999999998 999999999999999999999999999999887776665677777775
No 56
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.90 E-value=1.9e-23 Score=202.89 Aligned_cols=200 Identities=15% Similarity=0.080 Sum_probs=138.6
Q ss_pred CCceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCChh
Q 010820 282 LFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAGKE 359 (500)
Q Consensus 282 ~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (500)
.++++|+|||||||+ |+...+ +++.+.+.++..... .+.+....+......+.. ++... .....
T Consensus 60 ~~~k~vIFDlDGTLi------DS~~~~~~a~~~~~~~~G~~~~~------~~~~~~~~g~~~~~i~~~-~~~~~-~~~~~ 125 (273)
T PRK13225 60 QTLQAIIFDFDGTLV------DSLPTVVAIANAHAPDFGYDPID------ERDYAQLRQWSSRTIVRR-AGLSP-WQQAR 125 (273)
T ss_pred hhcCEEEECCcCccc------cCHHHHHHHHHHHHHHCCCCCCC------HHHHHHHhCccHHHHHHH-cCCCH-HHHHH
Confidence 368999999999999 665433 555555555543111 112222232222222222 22111 11111
Q ss_pred hHHHHHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHH
Q 010820 360 EGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSY 439 (500)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~ 439 (500)
....+.+.+.......+++||+.++|+.|+++|++++|+||+....+...++++ ++.++|+.++... ..+++++.|
T Consensus 126 ~~~~~~~~~~~~~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~---gl~~~F~~vi~~~-~~~~k~~~~ 201 (273)
T PRK13225 126 LLQRVQRQLGDCLPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQ---GLRSLFSVVQAGT-PILSKRRAL 201 (273)
T ss_pred HHHHHHHHHHhhcccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHc---CChhheEEEEecC-CCCCCHHHH
Confidence 123344444444445689999999999999999999999999999999999999 6677777655221 124578999
Q ss_pred HHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCC-CCCC-CCceeeCCccCC
Q 010820 440 VEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGP-LPEN-HGFKTINSFAEI 500 (500)
Q Consensus 440 ~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~-~~~~-~~~~~i~~l~el 500 (500)
..++++++++ |++|+||||+..|+++|+++|+.+|++.++.... .+.. .++++|+++.||
T Consensus 202 ~~~l~~~~~~-p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL 263 (273)
T PRK13225 202 SQLVAREGWQ-PAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDL 263 (273)
T ss_pred HHHHHHhCcC-hhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHH
Confidence 9999999998 9999999999999999999999999999984433 2322 348999998764
No 57
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.90 E-value=7.8e-23 Score=200.56 Aligned_cols=125 Identities=21% Similarity=0.197 Sum_probs=102.0
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc-cccccCCCCHHHHHHHHHHcCCCCCCc
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSLGVDKPSE 453 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~-d~~~~~KP~p~~~~~~l~~l~v~~p~~ 453 (500)
..++||+.++|+.|+++|++++|+||+....+..+++.+.+.++..+|+.+. +.....||+|++|.+++++++++ |++
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~-p~~ 221 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVD-PSR 221 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcC-hHH
Confidence 4799999999999999999999999999999999888763223333333222 33456799999999999999998 999
Q ss_pred EEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 454 ILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 454 ~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
|+||||+.+|+++|+++||.+|++.++.........++++|+++.++
T Consensus 222 ~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~l 268 (286)
T PLN02779 222 CVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDV 268 (286)
T ss_pred EEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChhhc
Confidence 99999999999999999999999988743322223348999998875
No 58
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.89 E-value=5.8e-23 Score=193.92 Aligned_cols=183 Identities=20% Similarity=0.167 Sum_probs=131.2
Q ss_pred CceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhh---hhhccccccCCCCCCC
Q 010820 283 FPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDL---KQGVAGAVPIPPGDAG 357 (500)
Q Consensus 283 ~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 357 (500)
++++|||||||||+ |+...+ ++..+.+.++.... .+.+....+... ...+............
T Consensus 1 ~~~avIFD~DGvLv------Dse~~~~~a~~~~~~~~g~~~~-------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 67 (221)
T COG0637 1 MIKAVIFDMDGTLV------DSEPLHARAWLEALKEYGIEIS-------DEEIRELHGGGIARIIDLLRKLAAGEDPADL 67 (221)
T ss_pred CCcEEEEcCCCCcC------cchHHHHHHHHHHHHHcCCCCC-------HHHHHHHHCCChHHHHHHHHHHhcCCcccCH
Confidence 47899999999999 664444 77777777776532 122222222111 1111111111110111
Q ss_pred hhhHHHHHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCC
Q 010820 358 KEEGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRE 435 (500)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~ 435 (500)
..................+++||+.++|..|+.+|++++++||+.+......++.+ ++.++|+.++ +.....||+
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~---gl~~~f~~~v~~~dv~~~KP~ 144 (221)
T COG0637 68 AELERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARL---GLLDYFDVIVTADDVARGKPA 144 (221)
T ss_pred HHHHHHHHHHHHhhhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHc---cChhhcchhccHHHHhcCCCC
Confidence 11122222222233445789999999999999999999999999999999999999 7888888877 445667999
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCC
Q 010820 436 TPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGN 482 (500)
Q Consensus 436 p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~ 482 (500)
|++|..+++++|+. |++|+.|+|+++++++|+++||.+|++..++.
T Consensus 145 Pd~yL~Aa~~Lgv~-P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~ 190 (221)
T COG0637 145 PDIYLLAAERLGVD-PEECVVVEDSPAGIQAAKAAGMRVVGVPAGHD 190 (221)
T ss_pred CHHHHHHHHHcCCC-hHHeEEEecchhHHHHHHHCCCEEEEecCCCC
Confidence 99999999999998 99999999999999999999999999987533
No 59
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.89 E-value=1.3e-22 Score=188.83 Aligned_cols=106 Identities=25% Similarity=0.346 Sum_probs=97.1
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
...++||+.++|++|+++|++++|+||++...+...++++ ++.++|+.++ +.....||+|++|..++++++++ |
T Consensus 90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~---gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~-p 165 (198)
T TIGR01428 90 RLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHA---GLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVP-P 165 (198)
T ss_pred cCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHC---CChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCC-h
Confidence 3468999999999999999999999999999999999999 6778888877 44667899999999999999998 9
Q ss_pred CcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCC
Q 010820 452 SEILFVTDVYQEATAAKAAGLEVVISIRPGNG 483 (500)
Q Consensus 452 ~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~ 483 (500)
++|+||||+..|+++|+++||.+|++++++..
T Consensus 166 ~~~~~vgD~~~Di~~A~~~G~~~i~v~r~~~~ 197 (198)
T TIGR01428 166 DEVLFVASNPWDLGGAKKFGFKTAWVNRPGEP 197 (198)
T ss_pred hhEEEEeCCHHHHHHHHHCCCcEEEecCCCCC
Confidence 99999999999999999999999999987643
No 60
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.88 E-value=7.2e-23 Score=194.05 Aligned_cols=196 Identities=15% Similarity=0.149 Sum_probs=127.8
Q ss_pred CceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhcccc---ccCCCCCCC
Q 010820 283 FPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGA---VPIPPGDAG 357 (500)
Q Consensus 283 ~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 357 (500)
++++|+||+||||+ |+...+ +++.+....+..... .+.++...+.+....+... ++... ..
T Consensus 3 ~~~~viFD~DGTL~------d~~~~~~~a~~~~~~~~g~~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~ 68 (221)
T PRK10563 3 QIEAVFFDCDGTLV------DSEVICSRAYVTMFAEFGITLSL------EEVFKRFKGVKLYEIIDIISKEHGVTL--AK 68 (221)
T ss_pred CCCEEEECCCCCCC------CChHHHHHHHHHHHHHcCCCCCH------HHHHHHhcCCCHHHHHHHHHHHhCCCC--CH
Confidence 58999999999999 443222 444554445543211 1111222222222222221 22111 11
Q ss_pred hhhHHHHHHhhccc-CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccc-cc--cccccCC
Q 010820 358 KEEGHIWRTGFESN-ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSG-FF--DTAVGNK 433 (500)
Q Consensus 358 ~~~~~~~~~~~~~~-~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~-~~--d~~~~~K 433 (500)
......+...+... .....++||+.++|+.| +++++|+||+....+...++++ ++.++|+. ++ +.....|
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~---~l~~~F~~~v~~~~~~~~~K 142 (221)
T PRK10563 69 AELEPVYRAEVARLFDSELEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKT---GMLHYFPDKLFSGYDIQRWK 142 (221)
T ss_pred HHHHHHHHHHHHHHHHccCCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhc---ChHHhCcceEeeHHhcCCCC
Confidence 11122333322211 23467999999999999 3899999999999999999999 77888864 44 3456789
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccC
Q 010820 434 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE 499 (500)
Q Consensus 434 P~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e 499 (500)
|+|++|..++++++++ |++|+||||+..|+++|+++|++++++..++........++.+++++.|
T Consensus 143 P~p~~~~~a~~~~~~~-p~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 207 (221)
T PRK10563 143 PDPALMFHAAEAMNVN-VENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTFTDLAQ 207 (221)
T ss_pred CChHHHHHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHHHHHHH
Confidence 9999999999999998 9999999999999999999999999997553322222122445666554
No 61
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.88 E-value=5.6e-22 Score=188.18 Aligned_cols=121 Identities=17% Similarity=0.218 Sum_probs=105.6
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHc-CCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSL-GVDKP 451 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l-~v~~p 451 (500)
..++||+.++|+.|+++ ++++|+||+....+...++.+ ++..+|+.++ +.....||+|++|.++++++ +++ |
T Consensus 96 ~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~---~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~-~ 170 (224)
T TIGR02254 96 HQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKS---GLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFS-K 170 (224)
T ss_pred CeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHC---CcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCC-c
Confidence 57999999999999999 999999999999999999999 6778888887 33566899999999999999 998 9
Q ss_pred CcEEEEeCCH-hhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 452 SEILFVTDVY-QEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 452 ~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
++|+||||+. +|+++|+++||++|++++++........++++++++.||
T Consensus 171 ~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el 220 (224)
T TIGR02254 171 EEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEEL 220 (224)
T ss_pred hheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHH
Confidence 9999999998 799999999999999998744333233348999998764
No 62
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.87 E-value=3.4e-22 Score=209.34 Aligned_cols=204 Identities=18% Similarity=0.179 Sum_probs=137.2
Q ss_pred CCceEEEEecCCcccccccccccchHh--HHhhhhhhhccc--cCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCC
Q 010820 282 LFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVT--YDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAG 357 (500)
Q Consensus 282 ~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (500)
+++++|+|||||||+ |+...+ +++.+...++.. +... ...+.++...+.+..+.+..++.....+..
T Consensus 239 ~m~k~vIFDlDGTLi------Ds~~~~~~a~~~~~~~~~~~~~~~~~---~~~~~~~~~~G~~~~~~~~~l~~~~~~~~~ 309 (459)
T PRK06698 239 EMLQALIFDMDGTLF------QTDKILELSLDDTFDHLRSLQLWDTV---TPIDKYREIMGVPLPKVWEALLPDHSLEIR 309 (459)
T ss_pred HhhhheeEccCCcee------cchhHHHHHHHHHHHHHhhhcccCCC---CCHHHHHHHcCCChHHHHHHHhhhcchhHH
Confidence 346899999999999 554433 444433333210 1100 112344455555544444443321111111
Q ss_pred hhhHHHHHHhhccc--CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccc-cccCCC
Q 010820 358 KEEGHIWRTGFESN--ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT-AVGNKR 434 (500)
Q Consensus 358 ~~~~~~~~~~~~~~--~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~-~~~~KP 434 (500)
......|.+.+... ....+++||+.++|+.|+++|++++|+||+....+...++++ ++.++|+.++.. ....||
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~---~l~~~f~~i~~~d~v~~~~ 386 (459)
T PRK06698 310 EQTDAYFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYY---DLDQWVTETFSIEQINSLN 386 (459)
T ss_pred HHHHHHHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHC---CcHhhcceeEecCCCCCCC
Confidence 11123333333322 123579999999999999999999999999999999999999 677888877722 123478
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 435 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
+|++|..++++++ |++|+||||+.+|+++|+++||.+|++.++.........++++++++.||
T Consensus 387 kP~~~~~al~~l~---~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el 449 (459)
T PRK06698 387 KSDLVKSILNKYD---IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLEL 449 (459)
T ss_pred CcHHHHHHHHhcC---cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHH
Confidence 8999999999864 67999999999999999999999999998744322233458999998764
No 63
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.87 E-value=9e-22 Score=188.48 Aligned_cols=117 Identities=15% Similarity=0.099 Sum_probs=96.5
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
...++||+.++|+.|+++ ++++|+||++.. ++.+ ++..+|+.++ +.....||+|++|..++++++++ |
T Consensus 111 ~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~---gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~-~ 180 (238)
T PRK10748 111 RIDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELF---GLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVP-I 180 (238)
T ss_pred cCCCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHC---CcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCC-h
Confidence 467999999999999875 999999998875 2555 6788888777 44567899999999999999998 9
Q ss_pred CcEEEEeCC-HhhHHHHHHcCCcEEEEcCCCCC---CCC-CCCCceeeCCccCC
Q 010820 452 SEILFVTDV-YQEATAAKAAGLEVVISIRPGNG---PLP-ENHGFKTINSFAEI 500 (500)
Q Consensus 452 ~~~l~VGDs-~~Di~aA~~aG~~~i~v~~~~~~---~~~-~~~~~~~i~~l~el 500 (500)
++|+||||+ ..|+.+|+++||.++|+++++.. ... ...++++|.+|.||
T Consensus 181 ~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el 234 (238)
T PRK10748 181 GEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASL 234 (238)
T ss_pred hHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHH
Confidence 999999999 59999999999999999986432 111 12348899998774
No 64
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.86 E-value=3e-21 Score=178.13 Aligned_cols=178 Identities=15% Similarity=0.185 Sum_probs=120.8
Q ss_pred CCceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCC-h
Q 010820 282 LFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAG-K 358 (500)
Q Consensus 282 ~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 358 (500)
.++++|+||+||||+ |+...+ +++.+...++..+. .+.++...+....+.+..++.....+.. .
T Consensus 3 ~~~~~viFD~DGTLi------Ds~~~~~~a~~~~~~~~g~~~~-------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 69 (188)
T PRK10725 3 DRYAGLIFDMDGTIL------DTEPTHRKAWREVLGRYGLQFD-------EQAMVALNGSPTWRIAQAIIELNQADLDPH 69 (188)
T ss_pred CcceEEEEcCCCcCc------cCHHHHHHHHHHHHHHcCCCCC-------HHHHHHhcCCCHHHHHHHHHHHhCCCCCHH
Confidence 357999999999999 554333 55555555554321 1122222332222222222111101111 1
Q ss_pred hhHHHHHHhhccc-CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCC
Q 010820 359 EEGHIWRTGFESN-ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRE 435 (500)
Q Consensus 359 ~~~~~~~~~~~~~-~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~ 435 (500)
.....+...+... .....++|+ .++|..|++. ++++|+||++...+...++++ ++.++|+.++ +.....||+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~---~l~~~fd~i~~~~~~~~~KP~ 144 (188)
T PRK10725 70 ALAREKTEAVKSMLLDSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHL---GLRRYFDAVVAADDVQHHKPA 144 (188)
T ss_pred HHHHHHHHHHHHHHhccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhC---CcHhHceEEEehhhccCCCCC
Confidence 1112222222222 223467885 6899999875 899999999999999999999 6788888777 445678999
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEc
Q 010820 436 TPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISI 478 (500)
Q Consensus 436 p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~ 478 (500)
|++|..++++++++ |++|+||||+..|+++|+++|+++|.+.
T Consensus 145 p~~~~~~~~~~~~~-~~~~l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 145 PDTFLRCAQLMGVQ-PTQCVVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred hHHHHHHHHHcCCC-HHHeEEEeccHhhHHHHHHCCCEEEeec
Confidence 99999999999998 9999999999999999999999999874
No 65
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.86 E-value=2.1e-21 Score=178.68 Aligned_cols=98 Identities=24% Similarity=0.342 Sum_probs=88.1
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
...++||+.++|+.|+++|++++++||+ ..+..+++++ ++..+|+.++ +.....||+|++|.+++++++++ |
T Consensus 86 ~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~---~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~-~ 159 (185)
T TIGR02009 86 GAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKL---GLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVS-P 159 (185)
T ss_pred CCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHc---ChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCC-H
Confidence 3689999999999999999999999998 6678889888 6677788777 33556899999999999999998 9
Q ss_pred CcEEEEeCCHhhHHHHHHcCCcEEEE
Q 010820 452 SEILFVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 452 ~~~l~VGDs~~Di~aA~~aG~~~i~v 477 (500)
++|+||||+..|+++|+++|+++|+|
T Consensus 160 ~~~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 160 NECVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred HHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence 99999999999999999999999875
No 66
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.86 E-value=2.1e-21 Score=178.69 Aligned_cols=97 Identities=21% Similarity=0.299 Sum_probs=86.7
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
..++||+.++|+.|+++|++++|+||+.. ...+++++ ++..+|+.++ +.....||+|++|+.++++++++ |+
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~---~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~-~~ 159 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKL---GLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVS-PS 159 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhc---CcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCC-HH
Confidence 47899999999999999999999999753 45678888 6778888777 44567899999999999999998 99
Q ss_pred cEEEEeCCHhhHHHHHHcCCcEEEE
Q 010820 453 EILFVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 453 ~~l~VGDs~~Di~aA~~aG~~~i~v 477 (500)
+|+||||+.+|+++|+++||++|+|
T Consensus 160 ~~v~vgD~~~di~aA~~aG~~~i~v 184 (185)
T TIGR01990 160 ECIGIEDAQAGIEAIKAAGMFAVGV 184 (185)
T ss_pred HeEEEecCHHHHHHHHHcCCEEEec
Confidence 9999999999999999999999987
No 67
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.86 E-value=6.3e-21 Score=178.27 Aligned_cols=97 Identities=20% Similarity=0.259 Sum_probs=86.8
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
..++||+.++|+.|+++|++++|+||+... +...++.+ ++..+|+.++ +.....||+|++|.+++++++++ |+
T Consensus 104 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~---~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~-~~ 178 (203)
T TIGR02252 104 WQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEAL---GLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGIS-PE 178 (203)
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHC---CcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCC-hh
Confidence 478999999999999999999999998875 46778888 6677888777 34566899999999999999998 99
Q ss_pred cEEEEeCCH-hhHHHHHHcCCcEEE
Q 010820 453 EILFVTDVY-QEATAAKAAGLEVVI 476 (500)
Q Consensus 453 ~~l~VGDs~-~Di~aA~~aG~~~i~ 476 (500)
+|+||||+. +|+++|+++||++||
T Consensus 179 ~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 179 EALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred HEEEECCCchHHHHHHHHcCCeeeC
Confidence 999999997 899999999999985
No 68
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.85 E-value=8.6e-21 Score=180.62 Aligned_cols=122 Identities=25% Similarity=0.276 Sum_probs=105.4
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
..+++|++.++|+.|+++ ++++|+||+....+..+++++ |+.++|+.++ +..+..||+|.+|+.+++++|++ |
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~---gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~-p 171 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQL---GLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVP-P 171 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHc---CChhhhheEEEecccccCCCCcHHHHHHHHHcCCC-c
Confidence 357999999999999998 999999999999999999999 6889999998 44677899999999999999998 9
Q ss_pred CcEEEEeCCH-hhHHHHHHcCCcEEEEcCCCCCC-CCCCCCceeeCCccCC
Q 010820 452 SEILFVTDVY-QEATAAKAAGLEVVISIRPGNGP-LPENHGFKTINSFAEI 500 (500)
Q Consensus 452 ~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~-~~~~~~~~~i~~l~el 500 (500)
++|+||||+. +||.+|+++||++||+++++... ......++.+.++.+|
T Consensus 172 ~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l 222 (229)
T COG1011 172 EEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAEL 222 (229)
T ss_pred ceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHHH
Confidence 9999999998 78899999999999999875432 1112347888877653
No 69
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.85 E-value=4.3e-21 Score=174.09 Aligned_cols=101 Identities=29% Similarity=0.428 Sum_probs=93.2
Q ss_pred cccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCC
Q 010820 373 LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 373 ~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
...+++||+.++|+.|+++|++++++||++...+...++++ ++..+|+.++ +.....||+|++|.+++++++++
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~---~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~- 149 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERL---GLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIP- 149 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHT---THGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSS-
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCccccccccccc---ccccccccccccchhhhhhhHHHHHHHHHHHcCCC-
Confidence 45689999999999999999999999999999999999999 6677788777 44666899999999999999998
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 010820 451 PSEILFVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 451 p~~~l~VGDs~~Di~aA~~aG~~~i~v 477 (500)
|++|+||||+..|+++|+++||.+|+|
T Consensus 150 p~~~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 150 PEEILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp GGGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred cceEEEEeCCHHHHHHHHHcCCeEEeC
Confidence 999999999999999999999999986
No 70
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.84 E-value=1.8e-20 Score=212.21 Aligned_cols=203 Identities=16% Similarity=0.149 Sum_probs=140.8
Q ss_pred CCCCceEEEEecCCcccccccccccchHh--HHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccc---cccCCCC
Q 010820 280 SGLFPRCIVLDIEGTTTPISFVSEVLFPY--ARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAG---AVPIPPG 354 (500)
Q Consensus 280 ~~~~~k~vlFD~DGTL~~~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 354 (500)
..+++++|+|||||||+ |+...+ +++.+.+.++..+. .+.++...+......+.. .++....
T Consensus 71 ~~~~ikaVIFDlDGTLi------DS~~~~~~a~~~~~~~~G~~it-------~e~~~~~~G~~~~~~~~~~~~~~~l~~~ 137 (1057)
T PLN02919 71 EWGKVSAVLFDMDGVLC------NSEEPSRRAAVDVFAEMGVEVT-------VEDFVPFMGTGEANFLGGVASVKGVKGF 137 (1057)
T ss_pred cCCCCCEEEECCCCCeE------eChHHHHHHHHHHHHHcCCCCC-------HHHHHHHhCCCHHHHHHHHHHhcCCCCC
Confidence 45678999999999999 655444 55555555555422 112233333322222211 1111100
Q ss_pred CCChhhHHHHHHhhccc---CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccc-ccccccc--cc
Q 010820 355 DAGKEEGHIWRTGFESN---ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR-KYLSGFF--DT 428 (500)
Q Consensus 355 ~~~~~~~~~~~~~~~~~---~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~-~~f~~~~--d~ 428 (500)
. .......+.+.|... .....++||+.++|++|+++|++++|+||+....+...++++ ++. .+|+.++ +.
T Consensus 138 ~-~~~~~~~~~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~---gl~~~~Fd~iv~~~~ 213 (1057)
T PLN02919 138 D-PDAAKKRFFEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAA---GLPLSMFDAIVSADA 213 (1057)
T ss_pred C-HHHHHHHHHHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHc---CCChhHCCEEEECcc
Confidence 1 111111222222211 112357999999999999999999999999999999999999 554 5677777 44
Q ss_pred cccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCC-CceeeCCccCC
Q 010820 429 AVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENH-GFKTINSFAEI 500 (500)
Q Consensus 429 ~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~-~~~~i~~l~el 500 (500)
....||+|++|+.++++++++ |++|+||||+..|+++|+++||++|++.++.....+... ++++++++.|+
T Consensus 214 ~~~~KP~Pe~~~~a~~~lgv~-p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el 285 (1057)
T PLN02919 214 FENLKPAPDIFLAAAKILGVP-TSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNI 285 (1057)
T ss_pred cccCCCCHHHHHHHHHHcCcC-cccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHC
Confidence 567899999999999999998 999999999999999999999999999998554444333 38999999875
No 71
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.84 E-value=4.1e-20 Score=170.00 Aligned_cols=97 Identities=25% Similarity=0.389 Sum_probs=86.8
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--ccccc----CCCCHHHHHHHHHHcC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVG----NKRETPSYVEITNSLG 447 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~----~KP~p~~~~~~l~~l~ 447 (500)
...++||+.++|++|+ ++++|+||++...+...++.+ ++.++|+.++ +.... .||+|++|+.++++++
T Consensus 82 ~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~---gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~ 155 (184)
T TIGR01993 82 KLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRL---GIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAG 155 (184)
T ss_pred hCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHc---CcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhC
Confidence 3579999999999997 479999999999999999999 6778888777 33333 4999999999999999
Q ss_pred CCCCCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 010820 448 VDKPSEILFVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 448 v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v 477 (500)
++ |++|+||||+..|+++|+++|+++|+|
T Consensus 156 ~~-~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 156 VD-PERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred CC-ccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 98 999999999999999999999999875
No 72
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.83 E-value=2.7e-20 Score=173.14 Aligned_cols=118 Identities=16% Similarity=0.205 Sum_probs=93.0
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccc---cccCCCCHHHHHHHHHHcCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT---AVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~---~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
...++||+.++|+.|++. ++++++||+........++.+ ++..+|..+|+. ....||+|++|..++++++
T Consensus 72 ~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~---~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--- 144 (197)
T PHA02597 72 YLSAYDDALDVINKLKED-YDFVAVTALGDSIDALLNRQF---NLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--- 144 (197)
T ss_pred hccCCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHHhhC---CHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC---
Confidence 357999999999999987 568899998887777777777 455555444421 2235889999999999999
Q ss_pred CCcEEEEeCCHhhHHHHHHc--CCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 451 PSEILFVTDVYQEATAAKAA--GLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 451 p~~~l~VGDs~~Di~aA~~a--G~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
|++|+||||+..|+++|+++ ||++|+++|+.. ......++.|+++.||
T Consensus 145 ~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~--~~~~~~~~~~~~~~~~ 194 (197)
T PHA02597 145 DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGER--DHIPKLAHRVKSWNDI 194 (197)
T ss_pred CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhh--ccccchhhhhccHHHH
Confidence 57899999999999999999 999999998843 2222336888888764
No 73
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.83 E-value=1.5e-19 Score=165.86 Aligned_cols=98 Identities=26% Similarity=0.338 Sum_probs=88.3
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
.+++||+.++|+.|+++|++++|+||+.... ..+++++ ++..+|+.++ +.....||+|++|.+++++++++ |+
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~---~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~-~~ 158 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQEL---GLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLK-PE 158 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhc---CCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCC-cc
Confidence 5799999999999999999999999999888 6666667 6777888776 34567899999999999999998 99
Q ss_pred cEEEEeCCHhhHHHHHHcCCcEEEE
Q 010820 453 EILFVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 453 ~~l~VGDs~~Di~aA~~aG~~~i~v 477 (500)
+|+||||+..|+++|+++|+.+|++
T Consensus 159 ~~~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 159 ECLFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred eEEEEcCCHHHHHHHHHcCCEEEeC
Confidence 9999999999999999999999975
No 74
>PLN02811 hydrolase
Probab=99.82 E-value=5.6e-20 Score=174.04 Aligned_cols=124 Identities=17% Similarity=0.233 Sum_probs=100.2
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--c--ccccCCCCHHHHHHHHHHcC--
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--D--TAVGNKRETPSYVEITNSLG-- 447 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d--~~~~~KP~p~~~~~~l~~l~-- 447 (500)
...++||+.++|+.|+++|++++|+||+.+......+.... ++.++|+.++ + .....||+|++|..++++++
T Consensus 76 ~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~--~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~ 153 (220)
T PLN02811 76 TSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHG--ELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDG 153 (220)
T ss_pred hCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccH--HHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCC
Confidence 46789999999999999999999999998765554333221 5567777666 4 45567999999999999997
Q ss_pred -CCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccCC
Q 010820 448 -VDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAEI 500 (500)
Q Consensus 448 -v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~el 500 (500)
++ |++|+||||+..|+++|+++|+.+|++.++.........++++++++.||
T Consensus 154 ~~~-~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~ 206 (220)
T PLN02811 154 PVD-PGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDF 206 (220)
T ss_pred CCC-ccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhC
Confidence 98 99999999999999999999999999988743322223348899998775
No 75
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.82 E-value=7.6e-20 Score=172.02 Aligned_cols=103 Identities=16% Similarity=0.166 Sum_probs=86.8
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHH--HHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLA--QRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVD 449 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~--~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~ 449 (500)
...++||+.++|+.|+++|++++|+||+.... ....+... ++..+|+.++ +.....||+|++|..++++++++
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~---~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~ 168 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPG---DIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVA 168 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhh---hhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCC
Confidence 45789999999999999999999999987543 22223333 5567788777 33456899999999999999998
Q ss_pred CCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 450 KPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 450 ~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
|++|+||||+..|+.+|+++||++|++.++
T Consensus 169 -~~~~l~i~D~~~di~aA~~aG~~~i~v~~~ 198 (211)
T TIGR02247 169 -PEECVFLDDLGSNLKPAAALGITTIKVSDE 198 (211)
T ss_pred -HHHeEEEcCCHHHHHHHHHcCCEEEEECCH
Confidence 999999999999999999999999999864
No 76
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.81 E-value=1.9e-19 Score=167.78 Aligned_cols=102 Identities=18% Similarity=0.258 Sum_probs=89.3
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCCc
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSE 453 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~~ 453 (500)
.++||+.++|+.|+++|++++|+||++.......+.... ++..+|+.++ +.....||+|++|+.++++++++ |++
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~--~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~-p~~ 160 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYP--EVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFS-AAD 160 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhch--hHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCC-hhH
Confidence 589999999999999999999999999887666554331 4567788777 44677899999999999999998 999
Q ss_pred EEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 454 ILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 454 ~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
|+||||+..|+++|+++||+++++.++
T Consensus 161 ~l~vgD~~~di~aA~~aG~~~i~~~~~ 187 (199)
T PRK09456 161 AVFFDDNADNIEAANALGITSILVTDK 187 (199)
T ss_pred eEEeCCCHHHHHHHHHcCCEEEEecCC
Confidence 999999999999999999999999875
No 77
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.81 E-value=5.1e-19 Score=164.54 Aligned_cols=90 Identities=13% Similarity=0.166 Sum_probs=80.4
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCCc
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSE 453 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~~ 453 (500)
.+.+++.++|+.|+++|++++|+||++...+..+++.+ ++..+|+.++ +.... ||+|++|..++++++++ |++
T Consensus 106 ~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~---gl~~~f~~~~~~~~~~~-KP~p~~~~~~~~~~~~~-~~~ 180 (197)
T TIGR01548 106 ETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTH---GLEILFPVQIWMEDCPP-KPNPEPLILAAKALGVE-ACH 180 (197)
T ss_pred ccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHc---CchhhCCEEEeecCCCC-CcCHHHHHHHHHHhCcC-ccc
Confidence 45667799999999999999999999999999999999 6778887666 33344 99999999999999998 999
Q ss_pred EEEEeCCHhhHHHHHHc
Q 010820 454 ILFVTDVYQEATAAKAA 470 (500)
Q Consensus 454 ~l~VGDs~~Di~aA~~a 470 (500)
|+||||+.+|+++|+++
T Consensus 181 ~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 181 AAMVGDTVDDIITGRKA 197 (197)
T ss_pred EEEEeCCHHHHHHHHhC
Confidence 99999999999999875
No 78
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.81 E-value=2.6e-19 Score=163.31 Aligned_cols=123 Identities=17% Similarity=0.150 Sum_probs=93.5
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcH---------------HHHHHHHhccCcccccccccccc---------ccccc
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSR---------------LAQRLIFGNSNYGDLRKYLSGFF---------DTAVG 431 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~---------------~~~~~~l~~~~~~~l~~~f~~~~---------d~~~~ 431 (500)
.++||+.++|++|+++|++++|+||.+. ......++.+++. +...+.+.. +....
T Consensus 26 ~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~ 104 (176)
T TIGR00213 26 EFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD-LDGIYYCPHHPEGVEEFRQVCDC 104 (176)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC-ccEEEECCCCCcccccccCCCCC
Confidence 4899999999999999999999999884 3334455554321 112111110 12335
Q ss_pred CCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcE-EEEcCCCCCCCCC-CCCceeeCCccCC
Q 010820 432 NKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV-VISIRPGNGPLPE-NHGFKTINSFAEI 500 (500)
Q Consensus 432 ~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~-i~v~~~~~~~~~~-~~~~~~i~~l~el 500 (500)
+||+|++|.+++++++++ |++|+||||+..|+++|+++|+.+ +++.++....... ..++++|+++.||
T Consensus 105 ~KP~p~~~~~a~~~~~~~-~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 105 RKPKPGMLLQARKELHID-MAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred CCCCHHHHHHHHHHcCcC-hhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence 799999999999999998 999999999999999999999998 7998874433323 2359999999875
No 79
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.79 E-value=5.9e-19 Score=161.80 Aligned_cols=119 Identities=19% Similarity=0.207 Sum_probs=92.7
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcH---------------HHHHHHHhccCcccccccccccc-------cccccCC
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSR---------------LAQRLIFGNSNYGDLRKYLSGFF-------DTAVGNK 433 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~---------------~~~~~~l~~~~~~~l~~~f~~~~-------d~~~~~K 433 (500)
.++||+.++|++|+++|++++|+||+.. ......+++++ + .|+.++ +.....|
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g---~--~f~~i~~~~~~~~~~~~~~K 103 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRG---G--RLDGIYYCPHHPEDGCDCRK 103 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcC---C--ccceEEECCCCCCCCCcCCC
Confidence 5899999999999999999999999863 23344555553 2 244433 1235689
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCC-CCCC--ceeeCCccCC
Q 010820 434 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLP-ENHG--FKTINSFAEI 500 (500)
Q Consensus 434 P~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~-~~~~--~~~i~~l~el 500 (500)
|+|++|..++++++++ |++|+||||+.+|+.+|+++|+.++++.++...... ...+ +++++++.||
T Consensus 104 P~p~~~~~~~~~l~~~-~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el 172 (181)
T PRK08942 104 PKPGMLLSIAERLNID-LAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADL 172 (181)
T ss_pred CCHHHHHHHHHHcCCC-hhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHH
Confidence 9999999999999998 999999999999999999999999999876432222 2233 7889888664
No 80
>PRK06769 hypothetical protein; Validated
Probab=99.79 E-value=7.1e-19 Score=159.70 Aligned_cols=121 Identities=11% Similarity=0.087 Sum_probs=94.1
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHH--------HHHHHHhccCcccccccccccc---cccccCCCCHHHHHHHHH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRL--------AQRLIFGNSNYGDLRKYLSGFF---DTAVGNKRETPSYVEITN 444 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~--------~~~~~l~~~~~~~l~~~f~~~~---d~~~~~KP~p~~~~~~l~ 444 (500)
.++||+.++|++|+++|++++|+||+... .....++.+ ++.++|.... +.....||+|++|.++++
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~---g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~ 104 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGF---GFDDIYLCPHKHGDGCECRKPSTGMLLQAAE 104 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhC---CcCEEEECcCCCCCCCCCCCCCHHHHHHHHH
Confidence 48999999999999999999999998742 123335555 4555544332 224568999999999999
Q ss_pred HcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCC-------CCCC-CCCceeeCCccCC
Q 010820 445 SLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNG-------PLPE-NHGFKTINSFAEI 500 (500)
Q Consensus 445 ~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~-------~~~~-~~~~~~i~~l~el 500 (500)
+++++ |++|+||||+..|+++|+++|+.+|++.++... +.+. ..++++++++.||
T Consensus 105 ~l~~~-p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el 167 (173)
T PRK06769 105 KHGLD-LTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDA 167 (173)
T ss_pred HcCCC-HHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHH
Confidence 99998 999999999999999999999999999987422 1122 2348888888764
No 81
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.78 E-value=3.3e-18 Score=158.56 Aligned_cols=207 Identities=18% Similarity=0.186 Sum_probs=143.6
Q ss_pred CCCCceEEEEecCCcccccccccccchHhHHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCC-h
Q 010820 280 SGLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAG-K 358 (500)
Q Consensus 280 ~~~~~k~vlFD~DGTL~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 358 (500)
....+.+++||+||||+|+ +..+..+++.+...++..+.+ +......|....+..+.++....+... +
T Consensus 6 ~~~~~~~~lfD~dG~lvdt----e~~y~~~~~~~~~~ygk~~~~-------~~~~~~mG~~~~eaa~~~~~~~~dp~s~e 74 (222)
T KOG2914|consen 6 LSLKVSACLFDMDGTLVDT----EDLYTEAWQELLDRYGKPYPW-------DVKVKSMGKRTSEAARLFVKKLPDPVSRE 74 (222)
T ss_pred cccceeeEEEecCCcEEec----HHHHHHHHHHHHHHcCCCChH-------HHHHHHcCCCHHHHHHHHHhhcCCCCCHH
Confidence 3456789999999999943 222233677777777765332 222224444444444443311111111 1
Q ss_pred hhHHHHHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc----cccccCCC
Q 010820 359 EEGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF----DTAVGNKR 434 (500)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~----d~~~~~KP 434 (500)
+......+..........+.||+.++++.|+.+|++++++|+..+.....++++++ ++...|.... ..+..+||
T Consensus 75 e~~~e~~~~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~--~~~~~f~~~v~~d~~~v~~gKP 152 (222)
T KOG2914|consen 75 EFNKEEEEILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHE--DIFKNFSHVVLGDDPEVKNGKP 152 (222)
T ss_pred HHHHHHHHHHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhh--HHHHhcCCCeecCCccccCCCC
Confidence 11222233333445567899999999999999999999999999999999998884 4566666555 22566799
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccC
Q 010820 435 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE 499 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e 499 (500)
+|++|..++++++..+|+.||+++|++..+++|+++||++|++.............+.+++++.+
T Consensus 153 ~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~~~~~ 217 (222)
T KOG2914|consen 153 DPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILESLED 217 (222)
T ss_pred CchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceecccccc
Confidence 99999999999999833999999999999999999999999999854444444445777777654
No 82
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.78 E-value=1.3e-18 Score=153.80 Aligned_cols=104 Identities=21% Similarity=0.187 Sum_probs=84.4
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcH---------------HHHHHHHhccCcccccccccccc--cccccCCCCHHH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSR---------------LAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPS 438 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~---------------~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~ 438 (500)
.++||+.++|+.|+++|++++|+||+.. ......++++++.....++...+ +.....||+|++
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~~ 106 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPGL 106 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHHH
Confidence 4899999999999999999999999873 45666777774321112222222 223456999999
Q ss_pred HHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 439 YVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 439 ~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
|+.++++++++ |++|+||||+..|+++|+++||.+||++++
T Consensus 107 ~~~~~~~~~~~-~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 107 ILEALKRLGVD-ASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHcCCC-hHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 99999999998 999999999999999999999999999875
No 83
>COG3347 Uncharacterized conserved protein [Function unknown]
Probab=99.78 E-value=2.8e-18 Score=165.00 Aligned_cols=195 Identities=15% Similarity=0.136 Sum_probs=148.0
Q ss_pred HHHHHHHHHHH-HcCCccccCCceeEEeCCCCC-CCCccEEEEecCCCCcCCCCCCCEEEEeCCCC--c-ccC-------
Q 010820 32 VLISELCRHFY-TLGWVSGTGGSITIKVHDDSI-PKPQQLILMSPSGVQKERMEPEDMYVLSGNGT--T-LSS------- 99 (500)
Q Consensus 32 ~~l~~~~r~l~-~~gl~~~~~GniS~R~~~~~~-~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~--~-~~g------- 99 (500)
.+++...|.+- +..++.+.|||.|+++.+... +++-+.+||+.||.+++.++.+.++-|.++.- . ..+
T Consensus 18 ~~lvY~S~liGsdp~lv~~GGGNTS~K~~~~dl~G~~v~vmwVKgSG~dl~ti~~~gf~~v~l~~Ll~l~~~~~~~d~eM 97 (404)
T COG3347 18 ELLVYRSRLIGSDPDLVLHGGGNTSVKTGETDLVGEEVEVLWVKGSGWDLATIKADGFVPVRLDPLLALKKLDKLPDEEM 97 (404)
T ss_pred HHHHHHHhhhcCChhheecCCCccceeeeccccCCceeEEEEEeccccchhhhccCCCcccchHhHHHHHhcCCCCHHHH
Confidence 34555555553 346888999999999976422 44556899999999999999999988876520 0 000
Q ss_pred ------CCCCCCCCCCCCCCCChHHHHHHHhhCCccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCcccCcce
Q 010820 100 ------PSPKPYPHKPPKCSDCAPLFMKAYEKRDAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHGYYDELV 173 (500)
Q Consensus 100 ------~~~~p~~~~p~~~S~e~~~H~~iy~~~~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 173 (500)
....|+.. ++|.|+.+|..+ ..+.|.|+|+..++++++.... .+.++.+.|. .
T Consensus 98 V~~l~~~~~n~~~P---rPSIET~LHAfl----P~k~VdHtH~dAiiaIa~~~n~--------~~l~~~I~Gd------~ 156 (404)
T COG3347 98 VGYLRHCMLNPSAP---RPSIETLLHAFL----PFKVVDHTHADAIIAIAVQANG--------KALIREIFGD------R 156 (404)
T ss_pred HHHHHHhhcCCCCC---CcchhhhhHhhc----CcccccccCccceeeeccCCCH--------HHHHHHhcCC------e
Confidence 11122212 349999999998 9999999999999999887431 2233444453 4
Q ss_pred eeeeeCCCCchhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q 010820 174 VPIIENTAYENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNH 249 (500)
Q Consensus 174 vp~~~~~~~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~ 249 (500)
+.++||....-+|+..+++.++.+|+..+++|.|||+++||+|.++||+++..+-.-|+-++..+ |++...+..
T Consensus 157 ~~~vPYvrPGf~La~~iae~~~~~p~~~glvL~~HGL~t~gdtak~~Ye~~I~~V~~Ae~~l~~~--~g~~~~~~a 230 (404)
T COG3347 157 VVWVPYVRPGFPLAKAIAERFKANPDAEGLVLENHGLFTFGDTAKEAYERMISIVNEAEEYLARR--GGKVAKSLA 230 (404)
T ss_pred EEEEeccCCCchHHHHHHHHHhhCCCceEEEeccccceEecccHHHHHHHHHHHHHHHHHHHHhh--CCcccccCC
Confidence 88899977778899999999999999999999999999999999999999999999999888776 444433333
No 84
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.76 E-value=8.5e-18 Score=149.88 Aligned_cols=91 Identities=30% Similarity=0.438 Sum_probs=79.3
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
....+||+.++|+.|+++|++++|+||+.+..+...++.+ +..+|+.++ +... .||+|++|.+++++++++ |
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~----l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~-~ 135 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH----LGDYFDLILGSDEFG-AKPEPEIFLAALESLGLP-P 135 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH----HHhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCC-C
Confidence 3457799999999999999999999999999999998774 245565555 3344 899999999999999998 8
Q ss_pred CcEEEEeCCHhhHHHHHHcC
Q 010820 452 SEILFVTDVYQEATAAKAAG 471 (500)
Q Consensus 452 ~~~l~VGDs~~Di~aA~~aG 471 (500)
+|+||||+..|+++|+++|
T Consensus 136 -~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 136 -EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred -CEEEEeCCHHHHHHHHHcc
Confidence 9999999999999999987
No 85
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.75 E-value=1.2e-17 Score=155.34 Aligned_cols=101 Identities=20% Similarity=0.246 Sum_probs=89.9
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccccccccc--ccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFD--TAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d--~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
-...+++.++|+.||++|..++++||...... ..+..+ ++..+||.++. ..+..||+|.+|+.+++++++. |+
T Consensus 112 ~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~---~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~-Pe 186 (237)
T KOG3085|consen 112 WKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLPL---GLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVK-PE 186 (237)
T ss_pred ceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhcc---CHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCC-hH
Confidence 35668899999999999999999999888777 667777 67788888883 3677899999999999999998 99
Q ss_pred cEEEEeCCH-hhHHHHHHcCCcEEEEcCC
Q 010820 453 EILFVTDVY-QEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 453 ~~l~VGDs~-~Di~aA~~aG~~~i~v~~~ 480 (500)
+|+||||+. +|+++|+++||+++.|...
T Consensus 187 e~vhIgD~l~nD~~gA~~~G~~ailv~~~ 215 (237)
T KOG3085|consen 187 ECVHIGDLLENDYEGARNLGWHAILVDNS 215 (237)
T ss_pred HeEEecCccccccHhHHHcCCEEEEEccc
Confidence 999999998 8999999999999999865
No 86
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.74 E-value=2e-17 Score=156.54 Aligned_cols=114 Identities=18% Similarity=0.204 Sum_probs=89.5
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc------------cccccCCCCHHHHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF------------DTAVGNKRETPSYVEI 442 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~------------d~~~~~KP~p~~~~~~ 442 (500)
.+++||+.++|+.|+++|++++|+||+....+..+++.++ +..+|...+ ......+|+|.+|.++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 160 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLG---LDAAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLIL 160 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcC---CCceEeeEEEEECCEEEEEecCcccCCcccHHHHHHH
Confidence 4699999999999999999999999999999999999984 444553221 0112346799999999
Q ss_pred HHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCC
Q 010820 443 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINS 496 (500)
Q Consensus 443 l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~ 496 (500)
+++++++ |++|+||||+.+|+++|+++|+..++ +. + +.....++++|.+
T Consensus 161 ~~~~~~~-~~~~i~iGDs~~Di~aa~~ag~~i~~-~~--~-~~~~~~a~~~i~~ 209 (219)
T TIGR00338 161 LRKEGIS-PENTVAVGDGANDLSMIKAAGLGIAF-NA--K-PKLQQKADICINK 209 (219)
T ss_pred HHHcCCC-HHHEEEEECCHHHHHHHHhCCCeEEe-CC--C-HHHHHhchhccCC
Confidence 9999998 99999999999999999999998643 21 2 2223344677664
No 87
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.74 E-value=1e-17 Score=145.45 Aligned_cols=98 Identities=22% Similarity=0.300 Sum_probs=83.9
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCc--------HHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHc-
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGS--------RLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSL- 446 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~--------~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l- 446 (500)
.++||+.++|+.|+++|++++|+||+. ...+...+++++ +..++. ++.. ...||+|++|+.+++++
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~---l~~~~~-~~~~-~~~KP~~~~~~~~~~~~~ 99 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELG---VPIDVL-YACP-HCRKPKPGMFLEALKRFN 99 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCC---CCEEEE-EECC-CCCCCChHHHHHHHHHcC
Confidence 489999999999999999999999999 788888998884 332221 2222 45799999999999999
Q ss_pred CCCCCCcEEEEeC-CHhhHHHHHHcCCcEEEEcC
Q 010820 447 GVDKPSEILFVTD-VYQEATAAKAAGLEVVISIR 479 (500)
Q Consensus 447 ~v~~p~~~l~VGD-s~~Di~aA~~aG~~~i~v~~ 479 (500)
+++ |++++|||| +..|+.+|+++|+.+|++++
T Consensus 100 ~~~-~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~~ 132 (132)
T TIGR01662 100 EID-PEESVYVGDQDLTDLQAAKRAGLAFILVAP 132 (132)
T ss_pred CCC-hhheEEEcCCCcccHHHHHHCCCeEEEeeC
Confidence 598 999999999 68999999999999999874
No 88
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=99.74 E-value=6.4e-17 Score=145.52 Aligned_cols=216 Identities=48% Similarity=0.777 Sum_probs=183.4
Q ss_pred CCceEEEEecCCcccccccccccchHhHHhhhhhhhccccCchhhHHHHHHHHHHHhhhhhhhccccccC----------
Q 010820 282 LFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTYDTAETQDDIKLLRSQVEDDLKQGVAGAVPI---------- 351 (500)
Q Consensus 282 ~~~k~vlFD~DGTL~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 351 (500)
.+.+.++.|+.||...+.++.|.+|+++.+++.+++..+|..+..+.....++....... +......++
T Consensus 6 ~~~k~~llDIegttt~isfVkd~LFpya~~nV~~~v~~~~~~~~~~~iv~~l~~~~~e~~-~~~~~~v~i~~~~~~~e~~ 84 (254)
T KOG2630|consen 6 RKWKELLLDIEGTTTSISFVKDVLFPYAKENVEELVQEPYETKIGQEIVSELRQRPEEQL-GSTNNIVPITDVTAAEEAD 84 (254)
T ss_pred hhhhhheEeEEeeecchHHHHHhhhHHHHHHHHHHhcCccccchHHHHHHHHhhhHHHHh-ccccCcccccccchhhhhh
Confidence 457899999999999999999999999999999999999988777777777776655444 111111111
Q ss_pred ------------CCC-CCChh-hHHHHHHhhcccCcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccc
Q 010820 352 ------------PPG-DAGKE-EGHIWRTGFESNELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGD 417 (500)
Q Consensus 352 ------------~~~-~~~~~-~~~~~~~~~~~~~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~ 417 (500)
+.. ...+. ++..|...|..+..+.+.|+++.+.++.++..|++++|.|+++...+..+..+.+-++
T Consensus 85 v~v~~v~~~~~~d~k~t~~K~lQg~iw~~gy~sg~lk~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gd 164 (254)
T KOG2630|consen 85 VHVANVEKLISFDEKRTILKQLQGRIWAAGYESGELKAHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGD 164 (254)
T ss_pred hHHHHHHHHHhhhcccchhHHHHHHHHHhhcccccccccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcch
Confidence 111 11111 1899999999999999999999999999999999999999999999999999999899
Q ss_pred ccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCC--ceeeC
Q 010820 418 LRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHG--FKTIN 495 (500)
Q Consensus 418 l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~--~~~i~ 495 (500)
+..+++++||...+.|-....|..|.+.++.+ +++++|.-|.+.-..+|+.+|+.+.++.|+++.+....+. .-++.
T Consensus 165 l~~y~~gyfDt~iG~K~e~~sy~~I~~~Ig~s-~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgna~l~dd~~~~y~~i~ 243 (254)
T KOG2630|consen 165 LRKYISGYFDTTIGLKVESQSYKKIGHLIGKS-PREILFLTDVPREAAAARKAGLQAGLVSRPGNAPLPDDAKVEYCVIW 243 (254)
T ss_pred HHHHhhhhhhccccceehhHHHHHHHHHhCCC-hhheEEeccChHHHHHHHhcccceeeeecCCCCCCCcccccceeeec
Confidence 99999999999888899999999999999998 9999999999999999999999999999999988777765 66677
Q ss_pred CccC
Q 010820 496 SFAE 499 (500)
Q Consensus 496 ~l~e 499 (500)
+|..
T Consensus 244 ~F~~ 247 (254)
T KOG2630|consen 244 SFEI 247 (254)
T ss_pred cchh
Confidence 7654
No 89
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.73 E-value=1.5e-18 Score=158.24 Aligned_cols=86 Identities=23% Similarity=0.290 Sum_probs=76.9
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
...++||+.++|+ +++|+||++...+...++++ ++..+|+.++ +.....||+|++|+.+++++|++ |
T Consensus 88 ~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~---~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~-p 156 (175)
T TIGR01493 88 NLPPWPDSAAALA-------RVAILSNASHWAFDQFAQQA---GLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLP-P 156 (175)
T ss_pred cCCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHC---CCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCC-H
Confidence 4569999999998 38999999999999999999 6788888776 44567899999999999999998 9
Q ss_pred CcEEEEeCCHhhHHHHHHc
Q 010820 452 SEILFVTDVYQEATAAKAA 470 (500)
Q Consensus 452 ~~~l~VGDs~~Di~aA~~a 470 (500)
++|+||||+..|+.+|+++
T Consensus 157 ~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 157 DRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHeEeEecChhhHHHHhcC
Confidence 9999999999999999864
No 90
>PLN02954 phosphoserine phosphatase
Probab=99.73 E-value=3.6e-17 Score=155.25 Aligned_cols=122 Identities=16% Similarity=0.206 Sum_probs=91.2
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccc--------cc---cc---cccCCCCHHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSG--------FF---DT---AVGNKRETPSYV 440 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~--------~~---d~---~~~~KP~p~~~~ 440 (500)
..++||+.++|+.|+++|++++|+||+....+..+++.+++.. ..+|.. ++ +. ....+|+|+++.
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~-~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~ 161 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPP-ENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQ 161 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCCh-hhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHH
Confidence 4589999999999999999999999999999999999985421 123321 11 00 123577899999
Q ss_pred HHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCC-CCCCCCCceeeCCccCC
Q 010820 441 EITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNG-PLPENHGFKTINSFAEI 500 (500)
Q Consensus 441 ~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~-~~~~~~~~~~i~~l~el 500 (500)
+++++++. ++|+||||+.+|+.+|+++|+.++...+++.. +.....++++|+++.||
T Consensus 162 ~~~~~~~~---~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el 219 (224)
T PLN02954 162 HIKKKHGY---KTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDL 219 (224)
T ss_pred HHHHHcCC---CceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHH
Confidence 99999875 48999999999999999988887655443322 22222348999998764
No 91
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.71 E-value=4.3e-17 Score=145.62 Aligned_cols=99 Identities=14% Similarity=0.077 Sum_probs=85.6
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCC---------------cHHHHHHHHhccCcccccccccccc-------cccccCC
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSG---------------SRLAQRLIFGNSNYGDLRKYLSGFF-------DTAVGNK 433 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~---------------~~~~~~~~l~~~~~~~l~~~f~~~~-------d~~~~~K 433 (500)
+++||+.++|++|+++|++++|+||. ....+...++.+|+ . |+.++ +.....|
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl---~--fd~ii~~~~~~~~~~~~~K 103 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGI---I--FDDVLICPHFPDDNCDCRK 103 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCC---c--eeEEEECCCCCCCCCCCCC
Confidence 59999999999999999999999996 35567778888854 2 43222 3455679
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 434 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 434 P~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
|+|++|..++++++++ |++|+||||+..|+++|+++||+++++.++
T Consensus 104 P~~~~~~~~~~~~~~~-~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~ 149 (161)
T TIGR01261 104 PKIKLLEPYLKKNLID-KARSYVIGDRETDMQLAENLGIRGIQYDEE 149 (161)
T ss_pred CCHHHHHHHHHHcCCC-HHHeEEEeCCHHHHHHHHHCCCeEEEEChh
Confidence 9999999999999998 999999999999999999999999999875
No 92
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.70 E-value=4.1e-17 Score=146.68 Aligned_cols=104 Identities=14% Similarity=0.111 Sum_probs=88.6
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCC-cHHHHHHHHhccCccccc---------ccccccc--cccccCCCCHHHHHH
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSG-SRLAQRLIFGNSNYGDLR---------KYLSGFF--DTAVGNKRETPSYVE 441 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~-~~~~~~~~l~~~~~~~l~---------~~f~~~~--d~~~~~KP~p~~~~~ 441 (500)
..++|||+.++|+.|+++|++++|+||+ ....+...++.+ ++. ++|+.++ +.....||.+.++..
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~---~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~ 119 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTF---EITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQK 119 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhC---CcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHH
Confidence 4579999999999999999999999998 888989999988 455 7777766 333345667777777
Q ss_pred HHHHc--CCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCC
Q 010820 442 ITNSL--GVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPG 481 (500)
Q Consensus 442 ~l~~l--~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~ 481 (500)
+.+++ +++ |++|+||||++.|+++|+++|+.++++.++.
T Consensus 120 ~~~~~~~gl~-p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~ 160 (174)
T TIGR01685 120 VNKVDPSVLK-PAQILFFDDRTDNVREVWGYGVTSCYCPSGM 160 (174)
T ss_pred hhhcccCCCC-HHHeEEEcChhHhHHHHHHhCCEEEEcCCCc
Confidence 77777 798 9999999999999999999999999998764
No 93
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.68 E-value=4.7e-16 Score=144.90 Aligned_cols=103 Identities=14% Similarity=0.042 Sum_probs=84.1
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccC----------CCCHHHHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGN----------KRETPSYVEI 442 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~----------KP~p~~~~~~ 442 (500)
.+++||+.++|+.|+++|++++|+||+....+..+++.+ ++..+|...+ +..+.. +++++.+.++
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~---g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~ 155 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKL---NPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERL 155 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHh---CCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHH
Confidence 469999999999999999999999999999999999998 4455554333 111111 3344789999
Q ss_pred HHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCC
Q 010820 443 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPG 481 (500)
Q Consensus 443 l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~ 481 (500)
+++++++ +++|+||||+.+|+.+|+.+|+.++....+.
T Consensus 156 ~~~~~~~-~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~ 193 (201)
T TIGR01491 156 KRELNPS-LTETVAVGDSKNDLPMFEVADISISLGDEGH 193 (201)
T ss_pred HHHhCCC-HHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence 9999998 9999999999999999999999887765543
No 94
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.67 E-value=8.8e-16 Score=137.46 Aligned_cols=186 Identities=16% Similarity=0.207 Sum_probs=130.4
Q ss_pred CCCCceEEEEecCCcccccccccccchHhHHhhhhhhhcccc--CchhhHHHHHHHHHHHhhhhhhhccccccCCCCCCC
Q 010820 280 SGLFPRCIVLDIEGTTTPISFVSEVLFPYARDNVGKHLSVTY--DTAETQDDIKLLRSQVEDDLKQGVAGAVPIPPGDAG 357 (500)
Q Consensus 280 ~~~~~k~vlFD~DGTL~~~~~~~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (500)
+.+++++++||+|+||+..+ ........+.+.+++-... .+.+.......+...+|.............+
T Consensus 11 ~~~~~~~l~FDiDdtLYp~S---t~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~~d----- 82 (244)
T KOG3109|consen 11 SGPNYKCLFFDIDDTLYPLS---TGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYIFD----- 82 (244)
T ss_pred CCccceEEEEecccccccCc---hhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhcccCC-----
Confidence 44589999999999999654 3333334444444443322 2333344455555555555554333222111
Q ss_pred hhhHHHHHHhhccc-C-cccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--c------
Q 010820 358 KEEGHIWRTGFESN-E-LEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--D------ 427 (500)
Q Consensus 358 ~~~~~~~~~~~~~~-~-~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d------ 427 (500)
...|.++.... + ...+|-+-.+++|-.|+.++ ..+.||+.+..+.++++++ |+.+.|+++. +
T Consensus 83 ---~deY~~~V~~~LPlq~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~L---GieDcFegii~~e~~np~~ 154 (244)
T KOG3109|consen 83 ---ADEYHRFVHGRLPLQDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKL---GIEDCFEGIICFETLNPIE 154 (244)
T ss_pred ---HHHHHHHhhccCcHhhcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHh---ChHHhccceeEeeccCCCC
Confidence 11222222211 1 12567777899999998764 8999999999999999999 7788888777 2
Q ss_pred ccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCC
Q 010820 428 TAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPG 481 (500)
Q Consensus 428 ~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~ 481 (500)
.....||.+.+|+.+.+..|+.+|.+++|++||.++|++|++.||.++++.+..
T Consensus 155 ~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~ 208 (244)
T KOG3109|consen 155 KTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGREH 208 (244)
T ss_pred CceeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEEeee
Confidence 234579999999999999999889999999999999999999999999997763
No 95
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.66 E-value=4.1e-16 Score=140.20 Aligned_cols=94 Identities=16% Similarity=0.264 Sum_probs=78.3
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHH------------HHHHHHhccCcccccccccccc--cccccCCCCHHHHHHH
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRL------------AQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEI 442 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~------------~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~ 442 (500)
+|||+.++|+.|+++|++++|+||++.. .+..++++++ +.. +.++ +.....||+|++|..+
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~g---l~~--~~ii~~~~~~~~KP~p~~~~~~ 117 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLK---VPI--QVLAATHAGLYRKPMTGMWEYL 117 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcC---CCE--EEEEecCCCCCCCCccHHHHHH
Confidence 7899999999999999999999998763 4677788884 322 1222 2234579999999999
Q ss_pred HHHcC--CCCCCcEEEEeCCH--------hhHHHHHHcCCcEEE
Q 010820 443 TNSLG--VDKPSEILFVTDVY--------QEATAAKAAGLEVVI 476 (500)
Q Consensus 443 l~~l~--v~~p~~~l~VGDs~--------~Di~aA~~aG~~~i~ 476 (500)
+++++ ++ |++++||||+. .|+++|+++|+.+++
T Consensus 118 ~~~~~~~~~-~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 118 QSQYNSPIK-MTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred HHHcCCCCC-chhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 99999 88 99999999996 699999999999875
No 96
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.65 E-value=1.8e-15 Score=142.85 Aligned_cols=95 Identities=13% Similarity=0.142 Sum_probs=76.7
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCC----cHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSG----SRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGV 448 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~----~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v 448 (500)
..+++++.++|+.|+++|++++++||. .......+++.+ ++..+|+.++ +.....||++. .+++++++
T Consensus 113 s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~l---Gi~~~f~~i~~~d~~~~~Kp~~~---~~l~~~~i 186 (237)
T TIGR01672 113 SIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNF---HIPAMNPVIFAGDKPGQYQYTKT---QWIQDKNI 186 (237)
T ss_pred CcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHh---CCchheeEEECCCCCCCCCCCHH---HHHHhCCC
Confidence 457788999999999999999999998 667888888889 5566676666 22333566654 35556554
Q ss_pred CCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 449 DKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 449 ~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
++||||+.+|+.+|+++|+.++.+.|+
T Consensus 187 -----~i~vGDs~~DI~aAk~AGi~~I~V~~g 213 (237)
T TIGR01672 187 -----RIHYGDSDNDITAAKEAGARGIRILRA 213 (237)
T ss_pred -----eEEEeCCHHHHHHHHHCCCCEEEEEec
Confidence 699999999999999999999999988
No 97
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.64 E-value=1.9e-15 Score=149.63 Aligned_cols=113 Identities=18% Similarity=0.197 Sum_probs=89.1
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccccc-------ccc-----cccccCCCCHHHHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS-------GFF-----DTAVGNKRETPSYVEI 442 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~-------~~~-----d~~~~~KP~p~~~~~~ 442 (500)
.+++||+.++|+.|+++|++++|+|++.......+.+++++ ...+. +.+ ......|||++.++++
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgl---d~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~l 256 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRL---DAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRL 256 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCC---CeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHH
Confidence 56999999999999999999999999999888888888843 32221 222 1123468999999999
Q ss_pred HHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeC
Q 010820 443 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTIN 495 (500)
Q Consensus 443 l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~ 495 (500)
++++|++ +++|++|||+.+|+.+++.+|+..++ + + .+.....+++.++
T Consensus 257 a~~lgi~-~~qtIaVGDg~NDl~m~~~AGlgiA~-n-A--kp~Vk~~Ad~~i~ 304 (322)
T PRK11133 257 AQEYEIP-LAQTVAIGDGANDLPMIKAAGLGIAY-H-A--KPKVNEQAQVTIR 304 (322)
T ss_pred HHHcCCC-hhhEEEEECCHHHHHHHHHCCCeEEe-C-C--CHHHHhhCCEEec
Confidence 9999998 99999999999999999999998887 2 1 2222333466665
No 98
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.61 E-value=5.8e-15 Score=133.62 Aligned_cols=96 Identities=11% Similarity=0.163 Sum_probs=81.8
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCc-HHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcE
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGS-RLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 454 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~-~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~ 454 (500)
.++||+.++|+.|+++|++++|+||++ ......+++.+ ++..++ ...||+|++|..++++++++ |++|
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~---gl~~~~-------~~~KP~p~~~~~~l~~~~~~-~~~~ 111 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKAL---GIPVLP-------HAVKPPGCAFRRAHPEMGLT-SEQV 111 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHc---CCEEEc-------CCCCCChHHHHHHHHHcCCC-HHHE
Confidence 378999999999999999999999998 56666666666 322211 23699999999999999998 9999
Q ss_pred EEEeCCH-hhHHHHHHcCCcEEEEcCCCC
Q 010820 455 LFVTDVY-QEATAAKAAGLEVVISIRPGN 482 (500)
Q Consensus 455 l~VGDs~-~Di~aA~~aG~~~i~v~~~~~ 482 (500)
+||||+. .|+.+|+++|+.+|++.++..
T Consensus 112 l~IGDs~~~Di~aA~~aGi~~i~v~~g~~ 140 (170)
T TIGR01668 112 AVVGDRLFTDVMGGNRNGSYTILVEPLVH 140 (170)
T ss_pred EEECCcchHHHHHHHHcCCeEEEEccCcC
Confidence 9999998 799999999999999998843
No 99
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.60 E-value=9.2e-15 Score=138.21 Aligned_cols=119 Identities=12% Similarity=0.051 Sum_probs=87.3
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccc--cccc--cccccCCCCHHH----------HH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL--SGFF--DTAVGNKRETPS----------YV 440 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f--~~~~--d~~~~~KP~p~~----------~~ 440 (500)
..++||+.++|+.|+++|++++|+||+....+..+++++ +.. ..++ +..+ +.....||+|.. ..
T Consensus 73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~-~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~ 150 (219)
T PRK09552 73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK-EQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKP 150 (219)
T ss_pred CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc-CcEEEeEEEecCCeeEEeccCCccccccccCCCchH
Confidence 579999999999999999999999999999999999876 422 1222 2223 223456887764 46
Q ss_pred HHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCC--CCCCCceeeCCccC
Q 010820 441 EITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPL--PENHGFKTINSFAE 499 (500)
Q Consensus 441 ~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~--~~~~~~~~i~~l~e 499 (500)
.++++++.. +.+|+||||+.+|+.+|+++|+.++ ++..... ....+.+.+++|.|
T Consensus 151 ~~l~~~~~~-~~~~i~iGDs~~Di~aa~~Ag~~~a---~~~l~~~~~~~~~~~~~~~~f~e 207 (219)
T PRK09552 151 SLIRKLSDT-NDFHIVIGDSITDLEAAKQADKVFA---RDFLITKCEELGIPYTPFETFHD 207 (219)
T ss_pred HHHHHhccC-CCCEEEEeCCHHHHHHHHHCCccee---HHHHHHHHHHcCCCccccCCHHH
Confidence 899999998 9999999999999999999999444 2211111 12223666677665
No 100
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.58 E-value=3.5e-15 Score=139.61 Aligned_cols=119 Identities=12% Similarity=0.078 Sum_probs=86.0
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--c-c---cccCCCCHHHHHHHHHHcC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--D-T---AVGNKRETPSYVEITNSLG 447 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d-~---~~~~KP~p~~~~~~l~~l~ 447 (500)
..+++||+.++|+.|+++ ++++|+||+....+...++++ ++..+|...+ + . ....+++|+....++++++
T Consensus 66 ~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~---gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~ 141 (205)
T PRK13582 66 TLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQL---GWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALK 141 (205)
T ss_pred hCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHc---CCchhhcceEEECCCCeEECccccccchHHHHHHHHH
Confidence 346899999999999999 999999999999999999999 4455554333 1 1 1112345556677788888
Q ss_pred CCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCc-eeeCCccCC
Q 010820 448 VDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGF-KTINSFAEI 500 (500)
Q Consensus 448 v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~-~~i~~l~el 500 (500)
.. +++|+||||+.+|+.+++++|+... +.+. . ......++ .+++++.||
T Consensus 142 ~~-~~~~v~iGDs~~D~~~~~aa~~~v~-~~~~-~-~~~~~~~~~~~~~~~~el 191 (205)
T PRK13582 142 SL-GYRVIAAGDSYNDTTMLGEADAGIL-FRPP-A-NVIAEFPQFPAVHTYDEL 191 (205)
T ss_pred Hh-CCeEEEEeCCHHHHHHHHhCCCCEE-ECCC-H-HHHHhCCcccccCCHHHH
Confidence 77 8999999999999999999998553 3322 1 11122233 378877654
No 101
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.57 E-value=2e-14 Score=143.23 Aligned_cols=100 Identities=17% Similarity=0.137 Sum_probs=83.7
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCC---------------cHHHHHHHHhccCcccccccccccc-------cccccC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSG---------------SRLAQRLIFGNSNYGDLRKYLSGFF-------DTAVGN 432 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~---------------~~~~~~~~l~~~~~~~l~~~f~~~~-------d~~~~~ 432 (500)
..++||+.++|++|+++|++++|+||. .......+++.+++ . |+.++ +....+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl---~--fd~i~i~~~~~sd~~~~r 103 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGI---K--FDEVLICPHFPEDNCSCR 103 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCC---c--eeeEEEeCCcCcccCCCC
Confidence 469999999999999999999999995 34456667777743 1 33322 234567
Q ss_pred CCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 433 KRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 433 KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
||+|.+|..++++++++ |++++||||+.+|+++|+++||++|++++.
T Consensus 104 KP~p~~l~~a~~~l~v~-~~~svmIGDs~sDi~aAk~aGi~~I~v~~~ 150 (354)
T PRK05446 104 KPKTGLVEEYLAEGAID-LANSYVIGDRETDVQLAENMGIKGIRYARE 150 (354)
T ss_pred CCCHHHHHHHHHHcCCC-cccEEEEcCCHHHHHHHHHCCCeEEEEECC
Confidence 99999999999999998 999999999999999999999999999764
No 102
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.55 E-value=3.2e-14 Score=123.04 Aligned_cols=99 Identities=28% Similarity=0.339 Sum_probs=84.9
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccc--ccc----------------CCCCH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT--AVG----------------NKRET 436 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~--~~~----------------~KP~p 436 (500)
..+++++.++|+.|+++|++++++||+....++..++.+ ++..+++..+.. ... .||++
T Consensus 23 ~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (139)
T cd01427 23 LELYPGVKEALKELKEKGIKLALATNKSRREVLELLEEL---GLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNP 99 (139)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHc---CCchhhhheeccchhhhhcccccccccccccccCCCCH
Confidence 469999999999999999999999999999999999888 444445544411 111 29999
Q ss_pred HHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 010820 437 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 437 ~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v 477 (500)
..+..++++++.+ +++++||||+.+|+++++++|+.++++
T Consensus 100 ~~~~~~~~~~~~~-~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 100 DKLLAALKLLGVD-PEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred HHHHHHHHHcCCC-hhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 9999999999997 999999999999999999999999875
No 103
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.46 E-value=3.8e-13 Score=115.99 Aligned_cols=92 Identities=13% Similarity=0.198 Sum_probs=80.4
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEE
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILF 456 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~ 456 (500)
..|.+++-+.+++++|.++.|+||+...-+....+++++ +|+ ....||-+..|.+++++++++ |++|+|
T Consensus 47 ~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v----~fi------~~A~KP~~~~fr~Al~~m~l~-~~~vvm 115 (175)
T COG2179 47 ATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV----PFI------YRAKKPFGRAFRRALKEMNLP-PEEVVM 115 (175)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC----cee------ecccCccHHHHHHHHHHcCCC-hhHEEE
Confidence 445577889999999999999999999999999988842 221 234799999999999999998 999999
Q ss_pred EeCCH-hhHHHHHHcCCcEEEEcC
Q 010820 457 VTDVY-QEATAAKAAGLEVVISIR 479 (500)
Q Consensus 457 VGDs~-~Di~aA~~aG~~~i~v~~ 479 (500)
|||.. .||.+++++||.+|.|..
T Consensus 116 VGDqL~TDVlggnr~G~~tIlV~P 139 (175)
T COG2179 116 VGDQLFTDVLGGNRAGMRTILVEP 139 (175)
T ss_pred EcchhhhhhhcccccCcEEEEEEE
Confidence 99998 999999999999999964
No 104
>KOG3699 consensus Cytoskeletal protein Adducin [Signal transduction mechanisms; Cytoskeleton]
Probab=99.46 E-value=1.7e-13 Score=139.17 Aligned_cols=160 Identities=16% Similarity=0.188 Sum_probs=119.3
Q ss_pred CCcCCCCCCCEEEEeCCCCcccCCCCCCCCCCCCCCCCChHHHHHHHhhC-CccEEEecCchHHHHHHhhcCCCcccccc
Q 010820 77 VQKERMEPEDMYVLSGNGTTLSSPSPKPYPHKPPKCSDCAPLFMKAYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRIT 155 (500)
Q Consensus 77 ~~~~~l~~~di~~vd~~g~~~~g~~~~p~~~~p~~~S~e~~~H~~iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~ 155 (500)
..+.+++.+.++.|+..|++++-....-.++ .+.+.+|.+||.+| +++||||.|.+...|.+...+ ..+|++
T Consensus 87 ~~~he~tas~l~kv~~~g~iv~qgs~~~~vn-----~sgf~lhsai~~a~p~vrc~ihi~t~~~aavs~mk~--gllp~s 159 (598)
T KOG3699|consen 87 LLYHEITASSLVKVNIQGEIVDQGSTNLGVN-----QSGFFLHSAIYAARPDVRCIIHIHTSAVAAVSSMKC--GLLPLS 159 (598)
T ss_pred hhhhhcccccceeecccchhhhccccccccc-----ccccchhhhhhccCCceeEEEEeccchHHHHHHhhh--cccccc
Confidence 6778899999999999999996432322222 35799999999999 999999999999999998866 355655
Q ss_pred hhhHhhhhcCCcccCcceeeeeeCCCC--chhHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHHHHHHHHHHH
Q 010820 156 HMEMIKGIKGHGYYDELVVPIIENTAY--ENELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDA 233 (500)
Q Consensus 156 ~~~~~~~~~g~~~~~~~~vp~~~~~~~--~~~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~ 233 (500)
+..+. + | .|.+++|.++ .++--..+...|+. . ++++|+|||++++|++++|||..+..+.-+|++
T Consensus 160 ~~a~~--l-g-------~~~~~dy~~~~e~~~~~~~~~~~lg~--~-kvl~lrN~g~~~~g~t~eeA~~~~~~~~~ace~ 226 (598)
T KOG3699|consen 160 QEALV--L-G-------EVAYYDYQGILEDEEERIPLQKNLGP--K-KVLVLRNHGVVSVGETVEEAFYYIFNLVLACEI 226 (598)
T ss_pred ccccc--c-c-------ceeeeecccccccchhhhhHHhhcCc--c-ceEEEecccccccchhHHHHHHHhhcchhhhhh
Confidence 54332 2 3 3777777653 22223334455554 3 999999999999999999999999999999999
Q ss_pred HHHHHhcCCC-CCCCCCCCccccc
Q 010820 234 AIKLHQLGLD-WSTPNHGPTRNFK 256 (500)
Q Consensus 234 ~~~a~~~g~~-~~~~~~~~~~~~~ 256 (500)
++.+..-|.. ..+++++..+...
T Consensus 227 qv~~~a~g~dnl~~~~~~~~~~~~ 250 (598)
T KOG3699|consen 227 QVSASAGGLDNLILLEEEKYKAIN 250 (598)
T ss_pred hhhhcccCccccccCcHhhhhhhh
Confidence 9996655543 4455555555444
No 105
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.45 E-value=3.6e-13 Score=123.90 Aligned_cols=93 Identities=9% Similarity=0.110 Sum_probs=75.7
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccc----------------------cccC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT----------------------AVGN 432 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~----------------------~~~~ 432 (500)
.+++||+.++|+.|+++|++++|+||+....+...++.+ ++..+|+.++.. ...+
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~---~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g 147 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGI---GEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCG 147 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHc---CChhheeEEeccCceECCCCcEEEecCCCCccCcCCCC
Confidence 579999999999999999999999999999999999998 556666655511 1122
Q ss_pred CCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcE
Q 010820 433 KRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEV 474 (500)
Q Consensus 433 KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~ 474 (500)
.+|++++++..++. +++++||||+.+|+.+|+++++.+
T Consensus 148 ~~K~~~~~~~~~~~----~~~~i~iGD~~~D~~aa~~~d~~~ 185 (188)
T TIGR01489 148 CCKGKVIHKLSEPK----YQHIIYIGDGVTDVCPAKLSDVVF 185 (188)
T ss_pred CCHHHHHHHHHhhc----CceEEEECCCcchhchHhcCCccc
Confidence 34788888887764 578999999999999999987644
No 106
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.45 E-value=1.2e-13 Score=123.01 Aligned_cols=99 Identities=12% Similarity=0.117 Sum_probs=80.4
Q ss_pred HHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhh
Q 010820 384 ALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQE 463 (500)
Q Consensus 384 ~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~D 463 (500)
+|++|+++|++++|+||.....+...++.+ ++..+|+. .||+|+++.+++++++++ +++|+||||+.+|
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~---gi~~~~~~-------~~~k~~~~~~~~~~~~~~-~~~~~~vGDs~~D 104 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTL---GITHLYQG-------QSNKLIAFSDILEKLALA-PENVAYIGDDLID 104 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHc---CCCEEEec-------ccchHHHHHHHHHHcCCC-HHHEEEECCCHHH
Confidence 899999999999999999999999999888 45555542 389999999999999998 9999999999999
Q ss_pred HHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCC
Q 010820 464 ATAAKAAGLEVVISIRPGNGPLPENHGFKTINS 496 (500)
Q Consensus 464 i~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~ 496 (500)
+.+++++|+. +.+..... .....+++++++
T Consensus 105 ~~~~~~ag~~-~~v~~~~~--~~~~~a~~i~~~ 134 (154)
T TIGR01670 105 WPVMEKVGLS-VAVADAHP--LLIPRADYVTRI 134 (154)
T ss_pred HHHHHHCCCe-EecCCcCH--HHHHhCCEEecC
Confidence 9999999997 55554422 122223566554
No 107
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.45 E-value=1.6e-13 Score=123.22 Aligned_cols=86 Identities=20% Similarity=0.288 Sum_probs=76.3
Q ss_pred HHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHh
Q 010820 383 EALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQ 462 (500)
Q Consensus 383 ~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~ 462 (500)
-.++.|+++|++++|+||.....++..++.+ ++..+|+. .||+|+.|..++++++++ +++|+||||+.+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~l---gi~~~f~~-------~kpkp~~~~~~~~~l~~~-~~ev~~iGD~~n 109 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEEL---KIKRFHEG-------IKKKTEPYAQMLEEMNIS-DAEVCYVGDDLV 109 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHC---CCcEEEec-------CCCCHHHHHHHHHHcCcC-HHHEEEECCCHH
Confidence 3678889999999999999999999999999 55555542 389999999999999998 999999999999
Q ss_pred hHHHHHHcCCcEEEEcC
Q 010820 463 EATAAKAAGLEVVISIR 479 (500)
Q Consensus 463 Di~aA~~aG~~~i~v~~ 479 (500)
|+.+++.+|+..+.-+-
T Consensus 110 Di~~~~~ag~~~am~nA 126 (169)
T TIGR02726 110 DLSMMKRVGLAVAVGDA 126 (169)
T ss_pred HHHHHHHCCCeEECcCc
Confidence 99999999998877654
No 108
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.45 E-value=2.4e-12 Score=121.58 Aligned_cols=97 Identities=11% Similarity=0.138 Sum_probs=75.4
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCc----HHHHHHHHhccCcccc--cccccccccccccCCCCHHHHHHHHHHcC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGS----RLAQRLIFGNSNYGDL--RKYLSGFFDTAVGNKRETPSYVEITNSLG 447 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~----~~~~~~~l~~~~~~~l--~~~f~~~~d~~~~~KP~p~~~~~~l~~l~ 447 (500)
...++||+.++|+.|+++|++++++||.. ......+++.+ ++ .++|...+......||++.. .+++++
T Consensus 112 ~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~---gip~~~~f~vil~gd~~~K~~K~~---~l~~~~ 185 (237)
T PRK11009 112 FSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDF---HIPADNMNPVIFAGDKPGQYTKTQ---WLKKKN 185 (237)
T ss_pred cCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHc---CCCcccceeEEEcCCCCCCCCHHH---HHHhcC
Confidence 46799999999999999999999999953 55777777767 45 45565555221235777653 445554
Q ss_pred CCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCC
Q 010820 448 VDKPSEILFVTDVYQEATAAKAAGLEVVISIRPG 481 (500)
Q Consensus 448 v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~ 481 (500)
+ ++||||+.+|+.+|+++|+.+|.+.|+.
T Consensus 186 i-----~I~IGDs~~Di~aA~~AGi~~I~v~~G~ 214 (237)
T PRK11009 186 I-----RIFYGDSDNDITAAREAGARGIRILRAA 214 (237)
T ss_pred C-----eEEEcCCHHHHHHHHHcCCcEEEEecCC
Confidence 3 7999999999999999999999999983
No 109
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.44 E-value=7.4e-13 Score=124.74 Aligned_cols=94 Identities=14% Similarity=0.115 Sum_probs=76.3
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccc---cccc--cccccCCCCHHHH----------
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYL---SGFF--DTAVGNKRETPSY---------- 439 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f---~~~~--d~~~~~KP~p~~~---------- 439 (500)
.+++||+.++|+.|+++|++++|+|++....+..+++.++ ....+ +..+ +.....||+|..+
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~---~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K 145 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIV---EKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCK 145 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhC---CcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCH
Confidence 5799999999999999999999999999999999998762 22332 1222 2234468887775
Q ss_pred HHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCC
Q 010820 440 VEITNSLGVDKPSEILFVTDVYQEATAAKAAGL 472 (500)
Q Consensus 440 ~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~ 472 (500)
..++++++.. +++++||||+.+|+.+|+.+|+
T Consensus 146 ~~~l~~~~~~-~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 146 PSLIRKLSEP-NDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred HHHHHHHhhc-CCcEEEEeCCHHHHHHHHhCCe
Confidence 4788888887 8999999999999999999998
No 110
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.44 E-value=7.7e-13 Score=124.30 Aligned_cols=88 Identities=26% Similarity=0.331 Sum_probs=77.6
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccc--cccccccccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK--YLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~--~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
.+++|++.++|+.|+++|++++++|+........+.+.+ ++.+ .|...+ .||++.+|.+++++++++ ++
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~l---gi~~~~v~a~~~-----~kP~~k~~~~~i~~l~~~-~~ 196 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQL---GIFDSIVFARVI-----GKPEPKIFLRIIKELQVK-PG 196 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHT---TSCSEEEEESHE-----TTTHHHHHHHHHHHHTCT-GG
T ss_pred CcchhhhhhhhhhhhccCcceeeeecccccccccccccc---cccccccccccc-----ccccchhHHHHHHHHhcC-CC
Confidence 478999999999999999999999999999999999988 4433 222211 699999999999999998 99
Q ss_pred cEEEEeCCHhhHHHHHHcC
Q 010820 453 EILFVTDVYQEATAAKAAG 471 (500)
Q Consensus 453 ~~l~VGDs~~Di~aA~~aG 471 (500)
+|+||||+.||+.+++++|
T Consensus 197 ~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 197 EVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp GEEEEESSGGHHHHHHHSS
T ss_pred EEEEEccCHHHHHHHHhCc
Confidence 9999999999999999987
No 111
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.36 E-value=2.1e-12 Score=120.44 Aligned_cols=99 Identities=8% Similarity=0.108 Sum_probs=81.1
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc----c---------ccccCCCCHHHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF----D---------TAVGNKRETPSYVE 441 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~----d---------~~~~~KP~p~~~~~ 441 (500)
..++||+.++|+.++++|++++|+|++....++.+++.+++ ..+|..-+ + ....++++...++.
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~---~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~ 162 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGI---DNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAE 162 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCC---cceEecceEEcCCCEEeCCccCCCCCChHHHHHHHH
Confidence 46899999999999999999999999999999999998854 44443211 1 11234667788999
Q ss_pred HHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 010820 442 ITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 442 ~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v 477 (500)
.+++.+++ +++|++|||+.+|+.+++.+|...+..
T Consensus 163 ~~~~~~~~-~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 163 LLAEEQID-LKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred HHHHcCCC-HHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 99999998 999999999999999999999876543
No 112
>PRK10444 UMP phosphatase; Provisional
Probab=99.36 E-value=1e-12 Score=126.08 Aligned_cols=70 Identities=19% Similarity=0.079 Sum_probs=59.3
Q ss_pred ccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEEcCCCCCC-CCC---CCCceeeCCccCC
Q 010820 430 VGNKRETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAAGLEVVISIRPGNGP-LPE---NHGFKTINSFAEI 500 (500)
Q Consensus 430 ~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~-~~~---~~~~~~i~~l~el 500 (500)
..+||+|++|..++++++++ |++|+||||+. .|+.+|+++|+.+++|.++.... ... ..++++++++.||
T Consensus 171 ~~gKP~~~~~~~~~~~~~~~-~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 171 YVGKPSPWIIRAALNKMQAH-SEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred ccCCCCHHHHHHHHHHcCCC-cccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 34699999999999999998 99999999997 89999999999999999884332 222 2359999998775
No 113
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.36 E-value=3.3e-12 Score=118.74 Aligned_cols=99 Identities=13% Similarity=0.049 Sum_probs=77.5
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccccc--------cccc-ccccCCCCHHHHHHHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS--------GFFD-TAVGNKRETPSYVEITNS 445 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~--------~~~d-~~~~~KP~p~~~~~~l~~ 445 (500)
.+++||+.++|+.|++.| +++|+||+....+..+++.+ ++..+|. +.+. .....||.+..+.+.+++
T Consensus 67 i~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~l---gi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~ 142 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQL---GFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKS 142 (203)
T ss_pred CCCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHc---CCchhhceeeEEecCCeeECeeecCcchHHHHHHHHHh
Confidence 468999999999999975 99999999999999999999 4455554 2221 112346666666666655
Q ss_pred cCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCC
Q 010820 446 LGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPG 481 (500)
Q Consensus 446 l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~ 481 (500)
.+ .+|++|||+.+|+.+++.+|...++...+.
T Consensus 143 ~~----~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~ 174 (203)
T TIGR02137 143 LY----YRVIAAGDSYNDTTMLSEAHAGILFHAPEN 174 (203)
T ss_pred hC----CCEEEEeCCHHHHHHHHhCCCCEEecCCHH
Confidence 44 379999999999999999999999987763
No 114
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.35 E-value=7.6e-13 Score=127.41 Aligned_cols=121 Identities=17% Similarity=0.127 Sum_probs=84.3
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCCcE
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSEI 454 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~~~ 454 (500)
.|+.+..++..|+ +|.+ .++||.+.......--..+-+.+...+.... +....+||+|++|..++++++++ ++++
T Consensus 122 ~y~~l~~a~~~l~-~g~~-~i~tN~D~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~-~~~~ 198 (249)
T TIGR01457 122 DYEKFATATLAIR-KGAH-FIGTNGDLAIPTERGLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTE-REET 198 (249)
T ss_pred CHHHHHHHHHHHH-CCCe-EEEECCCCCCCCCCCCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCC-cccE
Confidence 4556666777774 5776 8899977654422100111112223333222 23445799999999999999998 9999
Q ss_pred EEEeCCH-hhHHHHHHcCCcEEEEcCCCCCCC-CC---CCCceeeCCccCC
Q 010820 455 LFVTDVY-QEATAAKAAGLEVVISIRPGNGPL-PE---NHGFKTINSFAEI 500 (500)
Q Consensus 455 l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~-~~---~~~~~~i~~l~el 500 (500)
+||||+. .|+.+|+++||++++|.++..... .. ..++++++++.|+
T Consensus 199 ~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 199 LMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred EEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 9999997 899999999999999998843322 22 2348999999875
No 115
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.34 E-value=6e-12 Score=114.70 Aligned_cols=92 Identities=13% Similarity=0.095 Sum_probs=73.4
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--c-c-----------cccCCCCHHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--D-T-----------AVGNKRETPSYV 440 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d-~-----------~~~~KP~p~~~~ 440 (500)
.+++||+.++|+.++++|++++|+|++....++..++.++ +..+|...+ + . ......|+..+.
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g---~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~ 148 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLG---IDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLK 148 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcC---CchheeeeEEECCCCEEeCccCCcccCCcchHHHHHH
Confidence 3578999999999999999999999999999999999984 444433222 1 0 111234677889
Q ss_pred HHHHHcCCCCCCcEEEEeCCHhhHHHHHHc
Q 010820 441 EITNSLGVDKPSEILFVTDVYQEATAAKAA 470 (500)
Q Consensus 441 ~~l~~l~v~~p~~~l~VGDs~~Di~aA~~a 470 (500)
+.+++++++ +++++||||+.+|+.+++.+
T Consensus 149 ~~~~~~~~~-~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 149 ELLEESKIT-LKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHhCCC-HHHEEEEeCCHHHHHHHhcC
Confidence 999999997 99999999999999998753
No 116
>PLN02645 phosphoglycolate phosphatase
Probab=99.30 E-value=4.9e-13 Score=133.00 Aligned_cols=113 Identities=11% Similarity=0.038 Sum_probs=78.7
Q ss_pred HHHHHHhCCcEEEEEcCCcHHH-HHHHHhccCccccccccccccc--c---cccCCCCHHHHHHHHHHcCCCCCCcEEEE
Q 010820 384 ALEKWHSLGTKVYIYSSGSRLA-QRLIFGNSNYGDLRKYLSGFFD--T---AVGNKRETPSYVEITNSLGVDKPSEILFV 457 (500)
Q Consensus 384 ~L~~L~~~G~~l~v~Tn~~~~~-~~~~l~~~~~~~l~~~f~~~~d--~---~~~~KP~p~~~~~~l~~l~v~~p~~~l~V 457 (500)
.+..|+.++-.++|+||.+... ....+... +...+|..+.. . ...+||+|.+|..++++++++ +++++||
T Consensus 178 a~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~---g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~-~~~~~~V 253 (311)
T PLN02645 178 ATLCIRENPGCLFIATNRDAVTHLTDAQEWA---GAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIE-KSQICMV 253 (311)
T ss_pred HHHHHhcCCCCEEEEeCCCCCCCCCCCCCcc---chHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCC-cccEEEE
Confidence 4455554333589999988643 22222333 33444544441 1 123599999999999999998 9999999
Q ss_pred eCCH-hhHHHHHHcCCcEEEEcCCCCC-CCCC-----CCCceeeCCccCC
Q 010820 458 TDVY-QEATAAKAAGLEVVISIRPGNG-PLPE-----NHGFKTINSFAEI 500 (500)
Q Consensus 458 GDs~-~Di~aA~~aG~~~i~v~~~~~~-~~~~-----~~~~~~i~~l~el 500 (500)
||+. +|+.+|+++|+++++|.++... .... ..++++++++.+|
T Consensus 254 GD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l 303 (311)
T PLN02645 254 GDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDF 303 (311)
T ss_pred cCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHH
Confidence 9997 9999999999999999887332 2211 2348999988764
No 117
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.30 E-value=8.2e-12 Score=123.96 Aligned_cols=102 Identities=14% Similarity=0.050 Sum_probs=89.3
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccc-cccccc--c-------ccccCCCCHHHHHHHHHH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFF--D-------TAVGNKRETPSYVEITNS 445 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~-~f~~~~--d-------~~~~~KP~p~~~~~~l~~ 445 (500)
.++|++.++|+.|+++|++++++||.+.......++++ ++.+ +|+... + .....||+|+++..++++
T Consensus 187 ~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l---~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~ 263 (300)
T PHA02530 187 KPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWL---RQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWE 263 (300)
T ss_pred CCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHH---HHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHH
Confidence 58999999999999999999999999999999999998 5554 565554 2 233569999999999999
Q ss_pred cCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 446 LGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 446 l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
++.++|++|+||||+.+|+++|+++|+.+++|.||
T Consensus 264 ~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g 298 (300)
T PHA02530 264 KIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG 298 (300)
T ss_pred HhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence 98833899999999999999999999999999876
No 118
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.29 E-value=1.6e-12 Score=127.49 Aligned_cols=119 Identities=13% Similarity=0.153 Sum_probs=89.7
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHH-HHhccCcccccccccccc-----cccccCCCCHHHHHHHHHHcCCCC
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRL-IFGNSNYGDLRKYLSGFF-----DTAVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~-~l~~~~~~~l~~~f~~~~-----d~~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
.|+++.++|+.|+++|. ++|+||.+...... .+... ++..+|..+. +....+||+|.+|..++++++++
T Consensus 144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~---~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~- 218 (279)
T TIGR01452 144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTP---GTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSID- 218 (279)
T ss_pred CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCccc---ChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCC-
Confidence 47899999999998887 89999988654321 12222 3333433322 22345799999999999999998
Q ss_pred CCcEEEEeCCH-hhHHHHHHcCCcEEEEcCCCC-CCCCC---------CCCceeeCCccCC
Q 010820 451 PSEILFVTDVY-QEATAAKAAGLEVVISIRPGN-GPLPE---------NHGFKTINSFAEI 500 (500)
Q Consensus 451 p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~-~~~~~---------~~~~~~i~~l~el 500 (500)
|++|+||||+. .||.+|+++||++++|.+|.. .+... ..++++++++.||
T Consensus 219 ~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 219 PARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred hhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 99999999995 999999999999999998833 22221 2359999999886
No 119
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.29 E-value=7.6e-12 Score=125.04 Aligned_cols=90 Identities=13% Similarity=0.131 Sum_probs=78.9
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhc----cCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN----SNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~----~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
+|+|+.++|+.|+++|++++|+||+.......++++ + ++.++|+.+. ...||+|+.+..+++++++. ++
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~---~~~~~f~~~~---~~~~pk~~~i~~~~~~l~i~-~~ 104 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFI---LQAEDFDARS---INWGPKSESLRKIAKKLNLG-TD 104 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCcccc---CcHHHeeEEE---EecCchHHHHHHHHHHhCCC-cC
Confidence 688999999999999999999999999999999988 5 4455554432 33699999999999999998 99
Q ss_pred cEEEEeCCHhhHHHHHHcCCc
Q 010820 453 EILFVTDVYQEATAAKAAGLE 473 (500)
Q Consensus 453 ~~l~VGDs~~Di~aA~~aG~~ 473 (500)
+++||||++.|+.++++++-.
T Consensus 105 ~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 105 SFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred cEEEECCCHHHHHHHHHHCCC
Confidence 999999999999999997764
No 120
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.28 E-value=8.1e-12 Score=114.50 Aligned_cols=82 Identities=12% Similarity=0.221 Sum_probs=72.1
Q ss_pred HHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHh
Q 010820 383 EALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQ 462 (500)
Q Consensus 383 ~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~ 462 (500)
..++.|+++|++++|+||.....+...++.+ ++..+|. ..+++++.+.+++++++++ |++|+||||+.+
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~l---gl~~~f~-------g~~~k~~~l~~~~~~~gl~-~~ev~~VGDs~~ 123 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTL---GITHLYQ-------GQSNKLIAFSDLLEKLAIA-PEQVAYIGDDLI 123 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHc---CCceeec-------CCCcHHHHHHHHHHHhCCC-HHHEEEECCCHH
Confidence 3778888899999999999999999999988 4444443 2477899999999999998 999999999999
Q ss_pred hHHHHHHcCCcEE
Q 010820 463 EATAAKAAGLEVV 475 (500)
Q Consensus 463 Di~aA~~aG~~~i 475 (500)
|+.+++++|+.++
T Consensus 124 D~~~a~~aG~~~~ 136 (183)
T PRK09484 124 DWPVMEKVGLSVA 136 (183)
T ss_pred HHHHHHHCCCeEe
Confidence 9999999999854
No 121
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.28 E-value=3.4e-11 Score=107.80 Aligned_cols=103 Identities=18% Similarity=0.191 Sum_probs=79.4
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCc---------------HHHHHHHHhccCccccccc-ccccc--cccccCCCCHH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGS---------------RLAQRLIFGNSNYGDLRKY-LSGFF--DTAVGNKRETP 437 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~---------------~~~~~~~l~~~~~~~l~~~-f~~~~--d~~~~~KP~p~ 437 (500)
.+.||+.++|..|++.||+++|+||-+ ...+...++..|. .+... ++... +....+||++-
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv-~id~i~~Cph~p~~~c~cRKP~~g 109 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV-KIDGILYCPHHPEDNCDCRKPKPG 109 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC-ccceEEECCCCCCCCCcccCCChH
Confidence 488999999999999999999999922 1223333444421 22222 11111 22466899999
Q ss_pred HHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 438 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 438 ~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
+|+.++++++++ +++.+||||+..|+++|.++|++.+.+.++
T Consensus 110 m~~~~~~~~~iD-~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~ 151 (181)
T COG0241 110 MLLSALKEYNID-LSRSYVVGDRLTDLQAAENAGIKGVLVLTG 151 (181)
T ss_pred HHHHHHHHhCCC-ccceEEecCcHHHHHHHHHCCCCceEEEcC
Confidence 999999999998 999999999999999999999999888876
No 122
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.26 E-value=1.4e-11 Score=95.53 Aligned_cols=69 Identities=26% Similarity=0.329 Sum_probs=59.9
Q ss_pred cCCCCHHHHHHHHHHcCCCCCCcEEEEeCC-HhhHHHHHHcCCcEEEEcCCCCCC-CC---CCCCceeeCCccCC
Q 010820 431 GNKRETPSYVEITNSLGVDKPSEILFVTDV-YQEATAAKAAGLEVVISIRPGNGP-LP---ENHGFKTINSFAEI 500 (500)
Q Consensus 431 ~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs-~~Di~aA~~aG~~~i~v~~~~~~~-~~---~~~~~~~i~~l~el 500 (500)
.+||+|.+|..++++++++ |++|+||||+ ..||.+|+++|+.+|+|.++.... .. ...++++++||.|+
T Consensus 2 ~gKP~p~~~~~a~~~~~~~-~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVD-PSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSG-GGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCCCcHHHHHHHHHHcCCC-HHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 3799999999999999998 9999999999 799999999999999999984433 22 23459999999874
No 123
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.24 E-value=1.2e-10 Score=108.84 Aligned_cols=101 Identities=18% Similarity=0.209 Sum_probs=83.5
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc---c---------ccccCCCCHHHHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF---D---------TAVGNKRETPSYVEI 442 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~---d---------~~~~~KP~p~~~~~~ 442 (500)
.+++||+.++++.++++|++++|+|++.....+.+.+.+|+ ...+...+ + .....+-|.....+.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~---d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~ 152 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGI---DYVVANELEIDDGKLTGRVVGPICDGEGKAKALREL 152 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCC---chheeeEEEEeCCEEeceeeeeecCcchHHHHHHHH
Confidence 57999999999999999999999999999999999999953 43333222 1 112234488899999
Q ss_pred HHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcC
Q 010820 443 TNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIR 479 (500)
Q Consensus 443 l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~ 479 (500)
++++|++ +++++++||+.||+..-..+|...++-..
T Consensus 153 ~~~~g~~-~~~~~a~gDs~nDlpml~~ag~~ia~n~~ 188 (212)
T COG0560 153 AAELGIP-LEETVAYGDSANDLPMLEAAGLPIAVNPK 188 (212)
T ss_pred HHHcCCC-HHHeEEEcCchhhHHHHHhCCCCeEeCcC
Confidence 9999998 99999999999999999999998776544
No 124
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.23 E-value=2.1e-11 Score=104.96 Aligned_cols=91 Identities=18% Similarity=0.166 Sum_probs=75.6
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCC-cHHHHHHHHhccC----cccccccccccccccccCCCCHHHHHHHHHHcC--C
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSG-SRLAQRLIFGNSN----YGDLRKYLSGFFDTAVGNKRETPSYVEITNSLG--V 448 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~-~~~~~~~~l~~~~----~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~--v 448 (500)
+++||+.++|+.|+++|++++|+||+ ....+...++.++ +..+.++|+.++. ...+|+|++|..++++++ +
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~--~~~~pkp~~~~~a~~~lg~~~ 106 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTI--GYWLPKSPRLVEIALKLNGVL 106 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhh--cCCCcHHHHHHHHHHHhcCCC
Confidence 48999999999999999999999999 8888888888873 0014555655442 224799999999999999 9
Q ss_pred CCCCcEEEEeCCHhhHHHHHH
Q 010820 449 DKPSEILFVTDVYQEATAAKA 469 (500)
Q Consensus 449 ~~p~~~l~VGDs~~Di~aA~~ 469 (500)
. |++|+||||+..|++..++
T Consensus 107 ~-p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 107 K-PKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred C-cceEEEECCCHhHHHHHHh
Confidence 8 9999999999999887664
No 125
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.22 E-value=5.4e-12 Score=122.04 Aligned_cols=120 Identities=14% Similarity=0.129 Sum_probs=93.1
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc---c--ccccCCCCHHHHHHHHHHcCCCCC
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF---D--TAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~---d--~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
.|+++.++++.|++.+.+++|+||.+.......+... ++..+|+.+. + ....+||+|++|+.++++++++ |
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~---g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~-~ 196 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLAL---DVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCE-P 196 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCC---CchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCC-h
Confidence 4678899999999989999999998887766555555 4444454333 1 1223699999999999999998 9
Q ss_pred CcEEEEeCCH-hhHHHHHHcCCcEEEEcCCC-CCCC--C-CCCCceeeCCccCC
Q 010820 452 SEILFVTDVY-QEATAAKAAGLEVVISIRPG-NGPL--P-ENHGFKTINSFAEI 500 (500)
Q Consensus 452 ~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~-~~~~--~-~~~~~~~i~~l~el 500 (500)
++|+||||+. +|+.+|+++|+.+++|.++. .... . ...++++++++.||
T Consensus 197 ~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el 250 (257)
T TIGR01458 197 EEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHA 250 (257)
T ss_pred hhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHH
Confidence 9999999996 99999999999999998873 2221 1 22348999998764
No 126
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.18 E-value=2.5e-11 Score=107.28 Aligned_cols=92 Identities=20% Similarity=0.177 Sum_probs=79.3
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccc-ccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY-LSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~-f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
..++||+.++|+.|+ ++++++|+||+....+..+++++ ++..+ |+.++ +.....||+ |.+++++++.+ |
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l---~~~~~~f~~i~~~~d~~~~KP~---~~k~l~~l~~~-p 115 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLL---DPKKYFGYRRLFRDECVFVKGK---YVKDLSLLGRD-L 115 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHh---CcCCCEeeeEEECccccccCCe---EeecHHHcCCC-h
Confidence 568999999999998 57999999999999999999998 45443 56655 345556776 99999999998 9
Q ss_pred CcEEEEeCCHhhHHHHHHcCCcE
Q 010820 452 SEILFVTDVYQEATAAKAAGLEV 474 (500)
Q Consensus 452 ~~~l~VGDs~~Di~aA~~aG~~~ 474 (500)
++|+||||++.|+++|.++|+..
T Consensus 116 ~~~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 116 SNVIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred hcEEEEECCHHHhhcCccCEEEe
Confidence 99999999999999999998865
No 127
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=99.14 E-value=3.5e-11 Score=115.10 Aligned_cols=120 Identities=23% Similarity=0.262 Sum_probs=77.7
Q ss_pred CCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCCcEE
Q 010820 378 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPSEIL 455 (500)
Q Consensus 378 ~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~~~l 455 (500)
|....+++..+++ | ...|+||.+......---..+-+-+...+...- +....+||++.+|+.++++++.+ +++++
T Consensus 135 ~e~l~~a~~~i~~-g-~~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~tg~~~~~~GKP~~~i~~~al~~~~~~-~~~~~ 211 (269)
T COG0647 135 YEKLAEALLAIAA-G-APFIATNPDLTVPTERGLRPGAGAIAALLEQATGREPTVIGKPSPAIYEAALEKLGLD-RSEVL 211 (269)
T ss_pred HHHHHHHHHHHHc-C-CcEEEeCCCccccCCCCCccCcHHHHHHHHHhhCCcccccCCCCHHHHHHHHHHhCCC-cccEE
Confidence 3445666666654 4 688899976533211100000000000010000 11245799999999999999998 99999
Q ss_pred EEeCCH-hhHHHHHHcCCcEEEEcCCCC-CCCCC---CCCceeeCCccCC
Q 010820 456 FVTDVY-QEATAAKAAGLEVVISIRPGN-GPLPE---NHGFKTINSFAEI 500 (500)
Q Consensus 456 ~VGDs~-~Di~aA~~aG~~~i~v~~~~~-~~~~~---~~~~~~i~~l~el 500 (500)
||||+. +||.+|+++||.+++|..|-. ..... ..++++++++.++
T Consensus 212 mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~ 261 (269)
T COG0647 212 MVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAEL 261 (269)
T ss_pred EEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHH
Confidence 999998 999999999999999999833 22222 2348888887663
No 128
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=99.13 E-value=1.4e-10 Score=121.29 Aligned_cols=90 Identities=20% Similarity=0.326 Sum_probs=72.8
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcH------------HHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHH
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSR------------LAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEI 442 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~------------~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~ 442 (500)
++||+.+.|+.|++.|++++|+||... ..+..+++.+++ . |+.++ +....+||+|.++..+
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgi---p--fdviia~~~~~~RKP~pGm~~~a 272 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGV---P--FQVFIAIGAGFYRKPLTGMWDHL 272 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCC---c--eEEEEeCCCCCCCCCCHHHHHHH
Confidence 789999999999999999999999766 346777888843 2 44444 3345679999999999
Q ss_pred HHHcC----CCCCCcEEEEeCCHhhHHHHHHcCC
Q 010820 443 TNSLG----VDKPSEILFVTDVYQEATAAKAAGL 472 (500)
Q Consensus 443 l~~l~----v~~p~~~l~VGDs~~Di~aA~~aG~ 472 (500)
+++++ ++ +++++||||+..|+++++++|-
T Consensus 273 ~~~~~~~~~Id-~~~S~~VGDaagr~~~g~~ag~ 305 (526)
T TIGR01663 273 KEEANDGTEIQ-EDDCFFVGDAAGRPANGKAAGK 305 (526)
T ss_pred HHhcCcccCCC-HHHeEEeCCcccchHHHHhcCC
Confidence 99995 77 9999999999988777666554
No 129
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=99.10 E-value=4.9e-10 Score=99.94 Aligned_cols=103 Identities=20% Similarity=0.273 Sum_probs=72.2
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEc-CCcHHHHHHHHhccCcc-------cccccccccccccccCCCCHHHHHHHHHH
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYS-SGSRLAQRLIFGNSNYG-------DLRKYLSGFFDTAVGNKRETPSYVEITNS 445 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~T-n~~~~~~~~~l~~~~~~-------~l~~~f~~~~d~~~~~KP~p~~~~~~l~~ 445 (500)
...+||++.++|+.|+++|++++++| +...+.++.+|+.+++. .+.++|+. ..+..-.+...|..+.++
T Consensus 43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~---~eI~~gsK~~Hf~~i~~~ 119 (169)
T PF12689_consen 43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDY---LEIYPGSKTTHFRRIHRK 119 (169)
T ss_dssp EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECE---EEESSS-HHHHHHHHHHH
T ss_pred EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcch---hheecCchHHHHHHHHHh
Confidence 45799999999999999999999999 56688999999999543 00033332 123334788899999999
Q ss_pred cCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 446 LGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 446 l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
.|++ .++++|++|..++++...+.|+.++++.+|
T Consensus 120 tgI~-y~eMlFFDDe~~N~~~v~~lGV~~v~v~~G 153 (169)
T PF12689_consen 120 TGIP-YEEMLFFDDESRNIEVVSKLGVTCVLVPDG 153 (169)
T ss_dssp H----GGGEEEEES-HHHHHHHHTTT-EEEE-SSS
T ss_pred cCCC-hhHEEEecCchhcceeeEecCcEEEEeCCC
Confidence 9998 999999999999999999999999999875
No 130
>PRK11590 hypothetical protein; Provisional
Probab=99.09 E-value=1.4e-09 Score=102.23 Aligned_cols=100 Identities=11% Similarity=0.045 Sum_probs=67.6
Q ss_pred cccCCCHHHHH-HHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccccccccccc----ccCCC--CHHHHHHHHHHcC
Q 010820 375 GEVFDDVPEAL-EKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTA----VGNKR--ETPSYVEITNSLG 447 (500)
Q Consensus 375 ~~~~pgv~~~L-~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~----~~~KP--~p~~~~~~l~~l~ 447 (500)
..++||+.++| +.|+++|++++|+||+....+..+++.+++......+..-++.. ..+.+ ...=..++.+.++
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~~ 173 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLIASQMQRRYGGWVLTLRCLGHEKVAQLERKIG 173 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceEEEEEEEEEccEECCccCCChHHHHHHHHHhC
Confidence 46799999999 67888999999999999999999998885311122222221111 11111 1122233444456
Q ss_pred CCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 010820 448 VDKPSEILFVTDVYQEATAAKAAGLEVV 475 (500)
Q Consensus 448 v~~p~~~l~VGDs~~Di~aA~~aG~~~i 475 (500)
.+ ...+.+-|||.+|+.....+|-..+
T Consensus 174 ~~-~~~~~aY~Ds~~D~pmL~~a~~~~~ 200 (211)
T PRK11590 174 TP-LRLYSGYSDSKQDNPLLYFCQHRWR 200 (211)
T ss_pred CC-cceEEEecCCcccHHHHHhCCCCEE
Confidence 55 7788899999999999998887654
No 131
>PTZ00445 p36-lilke protein; Provisional
Probab=99.07 E-value=7.9e-10 Score=100.24 Aligned_cols=104 Identities=15% Similarity=0.210 Sum_probs=80.5
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHH---------------HHHHHhccCcc-cccccc---cccccc------cc
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLA---------------QRLIFGNSNYG-DLRKYL---SGFFDT------AV 430 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~---------------~~~~l~~~~~~-~l~~~f---~~~~d~------~~ 430 (500)
.+.|+...++.+|++.|++++|+|=+++.. +...+++.+-. .+...+ -.+++. .+
T Consensus 75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~g 154 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLG 154 (219)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhc
Confidence 366778899999999999999999887744 66667655311 111111 111222 35
Q ss_pred cCCCCHHH--H--HHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 431 GNKRETPS--Y--VEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 431 ~~KP~p~~--~--~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
..||+|.+ | +++++++|++ |++|+||+|+..++++|++.|++++.+..+
T Consensus 155 l~KPdp~iK~yHle~ll~~~gl~-peE~LFIDD~~~NVeaA~~lGi~ai~f~~~ 207 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFNVN-PDEILFIDDDMNNCKNALKEGYIALHVTGN 207 (219)
T ss_pred ccCCCccchHHHHHHHHHHcCCC-HHHeEeecCCHHHHHHHHHCCCEEEEcCCh
Confidence 57999999 9 9999999998 999999999999999999999999999753
No 132
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.02 E-value=2.5e-10 Score=109.59 Aligned_cols=97 Identities=12% Similarity=0.122 Sum_probs=78.2
Q ss_pred CCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccccccc--c--cccccCCCCHHHHHHHHHHcCCCCCCc
Q 010820 378 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGF--F--DTAVGNKRETPSYVEITNSLGVDKPSE 453 (500)
Q Consensus 378 ~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~--~--d~~~~~KP~p~~~~~~l~~l~v~~p~~ 453 (500)
|+++.++|+.|+++|.++ |+||.+.......+...+ ...+|..+ . +....+||+|.+|+.++++++..++++
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~---~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~ 215 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYG---AGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNR 215 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEec---ccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCccc
Confidence 689999999998899987 889998887766666663 33333322 1 234468999999999999999753679
Q ss_pred EEEEeCC-HhhHHHHHHcCCcEEEEc
Q 010820 454 ILFVTDV-YQEATAAKAAGLEVVISI 478 (500)
Q Consensus 454 ~l~VGDs-~~Di~aA~~aG~~~i~v~ 478 (500)
|+||||+ .+|+.+|+++|+.+++|.
T Consensus 216 ~~~vGD~~~~Di~~a~~~G~~~i~v~ 241 (242)
T TIGR01459 216 MLMVGDSFYTDILGANRLGIDTALVL 241 (242)
T ss_pred EEEECCCcHHHHHHHHHCCCeEEEEe
Confidence 9999999 599999999999999985
No 133
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.99 E-value=6.7e-10 Score=98.02 Aligned_cols=119 Identities=16% Similarity=0.143 Sum_probs=79.0
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccc---cc---c-ccccc---cc---cccCCCCHHHHH
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDL---RK---Y-LSGFF---DT---AVGNKRETPSYV 440 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l---~~---~-f~~~~---d~---~~~~KP~p~~~~ 440 (500)
+.++.||+++++..|+++|.+++++|++.+..+..+-..+|+.-- .+ + .++-| +. ...+--+++.+.
T Consensus 86 k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~ 165 (227)
T KOG1615|consen 86 KPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIA 165 (227)
T ss_pred CCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHH
Confidence 457899999999999999999999999999999999988865320 00 0 11222 11 111223777888
Q ss_pred HHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCC--CceeeCCcc
Q 010820 441 EITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENH--GFKTINSFA 498 (500)
Q Consensus 441 ~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~--~~~~i~~l~ 498 (500)
.+.+ ++. .+.++||||..+|+++..- |. .|+..+++....... ..+.+++|.
T Consensus 166 ~lrk--~~~-~~~~~mvGDGatDlea~~p-a~--afi~~~g~~~r~~vk~nak~~~~~f~ 219 (227)
T KOG1615|consen 166 LLRK--NYN-YKTIVMVGDGATDLEAMPP-AD--AFIGFGGNVIREGVKANAKWYVTDFY 219 (227)
T ss_pred HHHh--CCC-hheeEEecCCccccccCCc-hh--hhhccCCceEcHhhHhccHHHHHHHH
Confidence 8877 554 6699999999999988766 33 333334443332222 255555543
No 134
>PRK08238 hypothetical protein; Validated
Probab=98.98 E-value=6.5e-09 Score=108.51 Aligned_cols=95 Identities=13% Similarity=0.176 Sum_probs=75.0
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
.+++||+.++|++++++|++++++||+.+...+.+++++ ++ |+.++ +.....||++.. ..+.+.++ .+
T Consensus 71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~l---Gl---Fd~Vigsd~~~~~kg~~K~-~~l~~~l~---~~ 140 (479)
T PRK08238 71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHL---GL---FDGVFASDGTTNLKGAAKA-AALVEAFG---ER 140 (479)
T ss_pred CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHc---CC---CCEEEeCCCccccCCchHH-HHHHHHhC---cc
Confidence 357799999999999999999999999999999999888 33 55555 333445665543 23445555 35
Q ss_pred cEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 453 EILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 453 ~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
+++|+||+.+|+.+++.+| ..+.|+.+
T Consensus 141 ~~~yvGDS~~Dlp~~~~A~-~av~Vn~~ 167 (479)
T PRK08238 141 GFDYAGNSAADLPVWAAAR-RAIVVGAS 167 (479)
T ss_pred CeeEecCCHHHHHHHHhCC-CeEEECCC
Confidence 7999999999999999999 77788765
No 135
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=98.95 E-value=1.6e-08 Score=97.20 Aligned_cols=93 Identities=15% Similarity=0.181 Sum_probs=76.5
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccccccc------c--cccccCCCCH---------
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGF------F--DTAVGNKRET--------- 436 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~------~--d~~~~~KP~p--------- 436 (500)
...+.||+.++|+.|+++|++++|+|++....++.+++.++ +...+..+ | +....++|.|
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lg---l~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~ 195 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAG---VYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNH 195 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcC---CCCcCceEEeeeEEECCCCeEeCCCCCcccccccHH
Confidence 46799999999999999999999999999999999999984 43333333 3 2344457777
Q ss_pred HHHHHHHHHcC--CCCCCcEEEEeCCHhhHHHHHHc
Q 010820 437 PSYVEITNSLG--VDKPSEILFVTDVYQEATAAKAA 470 (500)
Q Consensus 437 ~~~~~~l~~l~--v~~p~~~l~VGDs~~Di~aA~~a 470 (500)
.+++...+.++ .. +++|++|||+.+|+.+|.-.
T Consensus 196 ~v~~~~~~~~~~~~~-~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 196 DVALRNTEYFNQLKD-RSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred HHHHHHHHHhCccCC-cceEEEECcChhhhhHhcCC
Confidence 78888999998 66 99999999999999997655
No 136
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=98.91 E-value=3.1e-09 Score=94.72 Aligned_cols=93 Identities=18% Similarity=0.189 Sum_probs=65.9
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCc--------------HHHHHHHHhccCcccccccccccc--cccccCCCCHHHHH
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGS--------------RLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYV 440 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~--------------~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~ 440 (500)
+.|++.+.|++|.+.||.++|+||-. ...+..+++.+++ . +..++ .....+||.+-|++
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~i---p--~~~~~a~~~d~~RKP~~GM~~ 104 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGI---P--IQVYAAPHKDPCRKPNPGMWE 104 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS------EEEEECGCSSTTSTTSSHHHH
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCC---c--eEEEecCCCCCCCCCchhHHH
Confidence 44689999999999999999999942 1334455555532 2 11122 22367899999999
Q ss_pred HHHHHcCC----CCCCcEEEEeCC-----------HhhHHHHHHcCCcEE
Q 010820 441 EITNSLGV----DKPSEILFVTDV-----------YQEATAAKAAGLEVV 475 (500)
Q Consensus 441 ~~l~~l~v----~~p~~~l~VGDs-----------~~Di~aA~~aG~~~i 475 (500)
.++++++. + .++++||||. ..|..-|.+.|+++.
T Consensus 105 ~~~~~~~~~~~id-~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 105 FALKDYNDGVEID-LANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp HHCCCTSTT--S--CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred HHHHhcccccccc-ccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence 99999975 6 8999999996 589999999999864
No 137
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=98.87 E-value=1.6e-08 Score=95.06 Aligned_cols=103 Identities=17% Similarity=0.143 Sum_probs=79.3
Q ss_pred ccccCCCHHHHHHHH--HhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc------cccc------------cCC
Q 010820 374 EGEVFDDVPEALEKW--HSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF------DTAV------------GNK 433 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L--~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~------d~~~------------~~K 433 (500)
..++.||+.++++.+ ++.|+.+.|+|+++..+++.+|++. ++...|+.++ +..+ ..-
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~---gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C 145 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHH---GLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLC 145 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhC---CCccccceEEeCCceecCCceEEEeCccCCCCCcC
Confidence 567899999999999 4579999999999999999999999 5666666655 1100 011
Q ss_pred C----CHHHHHHHHHHc---CCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 434 R----ETPSYVEITNSL---GVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 434 P----~p~~~~~~l~~l---~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
| |..++.+.++.. |+. .++++||||+.+|+-++.+.+-.-+.+.|-
T Consensus 146 ~~NmCK~~il~~~~~~~~~~g~~-~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~ 198 (234)
T PF06888_consen 146 PPNMCKGKILERLLQEQAQRGVP-YDRVIYIGDGRNDFCPALRLRPRDVVFPRK 198 (234)
T ss_pred CCccchHHHHHHHHHHHhhcCCC-cceEEEECCCCCCcCcccccCCCCEEecCC
Confidence 2 566777777663 665 789999999999999999987766555553
No 138
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=98.84 E-value=3.2e-08 Score=98.20 Aligned_cols=103 Identities=17% Similarity=0.103 Sum_probs=83.0
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCc-----ccccccccccccccccCCC---------------
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNY-----GDLRKYLSGFFDTAVGNKR--------------- 434 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~-----~~l~~~f~~~~d~~~~~KP--------------- 434 (500)
....||+.++|++|+++|++++|+||+....+...++.+.. .++.++|+.++. ...||
T Consensus 183 v~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt--~a~KP~FF~~~~pf~~v~~~ 260 (343)
T TIGR02244 183 VLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIV--DARKPGFFTEGRPFRQVDVE 260 (343)
T ss_pred hccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEe--CCCCCcccCCCCceEEEeCC
Confidence 46799999999999999999999999999999999998621 246777776551 12333
Q ss_pred ------CH------------HHHHHHHHHcCCCCCCcEEEEeCCH-hhHHHHH-HcCCcEEEEcCC
Q 010820 435 ------ET------------PSYVEITNSLGVDKPSEILFVTDVY-QEATAAK-AAGLEVVISIRP 480 (500)
Q Consensus 435 ------~p------------~~~~~~l~~l~v~~p~~~l~VGDs~-~Di~aA~-~aG~~~i~v~~~ 480 (500)
.. -......+.++++ +++++||||+. .||.+++ .+||.+++|.+.
T Consensus 261 ~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~-~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~pE 325 (343)
T TIGR02244 261 TGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWR-GKEVLYFGDHIYGDLLRSKKKRGWRTAAIIPE 325 (343)
T ss_pred CCcccCCccccccCCCeEeCCCHHHHHHHHCCC-CCcEEEECCcchHHHHhhHHhcCcEEEEEchh
Confidence 11 1345677888998 99999999998 8999998 899999999864
No 139
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=98.80 E-value=2.9e-08 Score=88.26 Aligned_cols=93 Identities=16% Similarity=0.141 Sum_probs=66.5
Q ss_pred cCCCHHHHHHHHHhCCc--EEEEEcCCc-------HHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcC
Q 010820 377 VFDDVPEALEKWHSLGT--KVYIYSSGS-------RLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLG 447 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~--~l~v~Tn~~-------~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~ 447 (500)
+.|.+.+.+++|++.+. .+.|+||+. ...++.+-+.+++ .+|. ....|| ..+..+++.++
T Consensus 60 i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgI----pvl~-----h~~kKP--~~~~~i~~~~~ 128 (168)
T PF09419_consen 60 IPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGI----PVLR-----HRAKKP--GCFREILKYFK 128 (168)
T ss_pred CCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCC----cEEE-----eCCCCC--ccHHHHHHHHh
Confidence 44556678888888866 499999984 5556666555531 1111 113566 56666776664
Q ss_pred C----CCCCcEEEEeCCH-hhHHHHHHcCCcEEEEcCC
Q 010820 448 V----DKPSEILFVTDVY-QEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 448 v----~~p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~ 480 (500)
. ..|++++||||.. .||.+|.++|+.+||+..|
T Consensus 129 ~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~g 166 (168)
T PF09419_consen 129 CQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDG 166 (168)
T ss_pred hccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecC
Confidence 2 1399999999998 9999999999999999875
No 140
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=98.77 E-value=7.8e-08 Score=90.04 Aligned_cols=101 Identities=12% Similarity=0.116 Sum_probs=67.9
Q ss_pred cccCCCHHHHHH-HHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccC----CC--CHHHHHHHHHHcC
Q 010820 375 GEVFDDVPEALE-KWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGN----KR--ETPSYVEITNSLG 447 (500)
Q Consensus 375 ~~~~pgv~~~L~-~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~----KP--~p~~~~~~l~~l~ 447 (500)
..++||+.++|+ .++++|++++|+||+....++.+.+..++.+..+.+..-++....+ .+ ..+=..++.+.++
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~~ 172 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLIASQIERGNGGWVLPLRCLGHEKVAQLEQKIG 172 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEEEEEeEEeCCceEcCccCCChHHHHHHHHHhC
Confidence 358999999995 8888999999999999999999987764423233332222110001 11 1122223434445
Q ss_pred CCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 448 VDKPSEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 448 v~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
.+ .+.+.+-|||.+|+.....+|-..+.
T Consensus 173 ~~-~~~~~aYsDS~~D~pmL~~a~~~~~V 200 (210)
T TIGR01545 173 SP-LKLYSGYSDSKQDNPLLAFCEHRWRV 200 (210)
T ss_pred CC-hhheEEecCCcccHHHHHhCCCcEEE
Confidence 44 67888999999999999998876543
No 141
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.77 E-value=1.5e-08 Score=97.20 Aligned_cols=89 Identities=10% Similarity=0.090 Sum_probs=69.0
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHH--HHHhccCcccccc-cccccccccccCCCCHHHHHHHHHHcCCCCCCc
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQR--LIFGNSNYGDLRK-YLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 453 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~--~~l~~~~~~~l~~-~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~ 453 (500)
++||+.++|++|+++|++++++||+++.... ..++++ ++.. +|+.++..... ....+.++++++++. |++
T Consensus 25 ~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~---gl~~~~~~~Ii~s~~~---~~~~l~~~~~~~~~~-~~~ 97 (242)
T TIGR01459 25 TYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSL---GINADLPEMIISSGEI---AVQMILESKKRFDIR-NGI 97 (242)
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHC---CCCccccceEEccHHH---HHHHHHhhhhhccCC-Cce
Confidence 7999999999999999999999999887665 678888 5555 66665522111 125777778888987 999
Q ss_pred EEEEeCCHhhHHHHHHcCC
Q 010820 454 ILFVTDVYQEATAAKAAGL 472 (500)
Q Consensus 454 ~l~VGDs~~Di~aA~~aG~ 472 (500)
|++|||+..|++.....|.
T Consensus 98 ~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 98 IYLLGHLENDIINLMQCYT 116 (242)
T ss_pred EEEeCCcccchhhhcCCCc
Confidence 9999999988887755544
No 142
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.74 E-value=5.3e-08 Score=95.12 Aligned_cols=113 Identities=12% Similarity=0.070 Sum_probs=72.0
Q ss_pred CCCHHHHHHHHHhCCcEEEEEcCCc-----HHHHHHHHhccCccccccc--ccccccccccCCCCHHHHHHHHHHcCCCC
Q 010820 378 FDDVPEALEKWHSLGTKVYIYSSGS-----RLAQRLIFGNSNYGDLRKY--LSGFFDTAVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 378 ~pgv~~~L~~L~~~G~~l~v~Tn~~-----~~~~~~~l~~~~~~~l~~~--f~~~~d~~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
++++.++++.++..+..+.++++.. ......+.+.++ +.-. ...+++.....-.++..++.++++++++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~- 214 (272)
T PRK10530 139 FTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELG---LECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWS- 214 (272)
T ss_pred eEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcC---ceEEEecCceEEEecCCCChHHHHHHHHHHcCCC-
Confidence 4667777777777676677777644 223334444442 2211 1123344333445788999999999998
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCc
Q 010820 451 PSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSF 497 (500)
Q Consensus 451 p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l 497 (500)
++++++|||+.||+++++.+|+..+. +...+.....+++++++-
T Consensus 215 ~~e~i~~GD~~NDi~m~~~ag~~vam---gna~~~lk~~Ad~v~~~n 258 (272)
T PRK10530 215 MKNVVAFGDNFNDISMLEAAGLGVAM---GNADDAVKARADLVIGDN 258 (272)
T ss_pred HHHeEEeCCChhhHHHHHhcCceEEe---cCchHHHHHhCCEEEecC
Confidence 99999999999999999999974433 322223333347776553
No 143
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.73 E-value=1e-07 Score=91.70 Aligned_cols=85 Identities=11% Similarity=0.098 Sum_probs=61.9
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcH---HHHHHHHhccCccccccc-ccccccccccCCCCHHHHHHHHHHcCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSR---LAQRLIFGNSNYGDLRKY-LSGFFDTAVGNKRETPSYVEITNSLGVD 449 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~---~~~~~~l~~~~~~~l~~~-f~~~~d~~~~~KP~p~~~~~~l~~l~v~ 449 (500)
...++||+.++|+.|+++|++++++||+.. ......++.+| +... ++.++ .....++++..+..+.+.+++
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~G---i~~~~~d~ll-lr~~~~~K~~rr~~I~~~y~I- 190 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFG---FPQADEEHLL-LKKDKSSKESRRQKVQKDYEI- 190 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcC---cCCCCcceEE-eCCCCCCcHHHHHHHHhcCCE-
Confidence 456999999999999999999999999874 44456677774 4333 23333 111236778888888776655
Q ss_pred CCCcEEEEeCCHhhHHHH
Q 010820 450 KPSEILFVTDVYQEATAA 467 (500)
Q Consensus 450 ~p~~~l~VGDs~~Di~aA 467 (500)
++||||+..|+...
T Consensus 191 ----vl~vGD~~~Df~~~ 204 (266)
T TIGR01533 191 ----VLLFGDNLLDFDDF 204 (266)
T ss_pred ----EEEECCCHHHhhhh
Confidence 69999999999653
No 144
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.73 E-value=8.1e-08 Score=88.49 Aligned_cols=88 Identities=17% Similarity=0.231 Sum_probs=60.8
Q ss_pred CCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccc-------cccCC---CCHHHHHHH---HHH
Q 010820 379 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT-------AVGNK---RETPSYVEI---TNS 445 (500)
Q Consensus 379 pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~-------~~~~K---P~p~~~~~~---l~~ 445 (500)
|++.++|+.++++|++++|+|++....++.+++.+++....-+-...++. ....+ -|...+..+ ...
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~ 171 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIRDEE 171 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHHhhc
Confidence 44449999999999999999999999999999988543311111111110 00111 155566666 444
Q ss_pred cCCCCCCcEEEEeCCHhhHHHHH
Q 010820 446 LGVDKPSEILFVTDVYQEATAAK 468 (500)
Q Consensus 446 l~v~~p~~~l~VGDs~~Di~aA~ 468 (500)
+.. +..+++|||+.+|+.+++
T Consensus 172 -~~~-~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 172 -DID-PDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp -THT-CCEEEEEESSGGGHHHHH
T ss_pred -CCC-CCeEEEEECCHHHHHHhC
Confidence 776 889999999999998875
No 145
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.67 E-value=2.3e-08 Score=85.59 Aligned_cols=84 Identities=18% Similarity=0.279 Sum_probs=72.1
Q ss_pred HHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhh
Q 010820 384 ALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQE 463 (500)
Q Consensus 384 ~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~D 463 (500)
.|+.|.+.|++++|+|+......+...+.+| +..++.+ .+.+...|..+++++++. +++|.||||..+|
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LG---I~~~~qG-------~~dK~~a~~~L~~~~~l~-~e~~ayiGDD~~D 111 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLG---IKHLYQG-------ISDKLAAFEELLKKLNLD-PEEVAYVGDDLVD 111 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcC---Cceeeec-------hHhHHHHHHHHHHHhCCC-HHHhhhhcCcccc
Confidence 5777888999999999999999999998884 4444433 455888999999999999 9999999999999
Q ss_pred HHHHHHcCCcEEEEc
Q 010820 464 ATAAKAAGLEVVISI 478 (500)
Q Consensus 464 i~aA~~aG~~~i~v~ 478 (500)
+....+.|+.++..+
T Consensus 112 lpvm~~vGls~a~~d 126 (170)
T COG1778 112 LPVMEKVGLSVAVAD 126 (170)
T ss_pred HHHHHHcCCcccccc
Confidence 999999999887554
No 146
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=98.67 E-value=6.2e-09 Score=92.87 Aligned_cols=69 Identities=25% Similarity=0.306 Sum_probs=55.9
Q ss_pred cccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEEcCCCCCCCCCC----CCceeeCCcc
Q 010820 429 AVGNKRETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAAGLEVVISIRPGNGPLPEN----HGFKTINSFA 498 (500)
Q Consensus 429 ~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~~~~----~~~~~i~~l~ 498 (500)
...+||+|.+|+.+++.+|++ |++++||||.. .|+-+|++.||+.|+|..+.-++..+. .++.+.++|.
T Consensus 177 ~vvGKP~~~fFe~al~~~gv~-p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~ 250 (262)
T KOG3040|consen 177 TVVGKPSPFFFESALQALGVD-PEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFA 250 (262)
T ss_pred EEecCCCHHHHHHHHHhcCCC-hHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHH
Confidence 456799999999999999998 99999999887 799999999999999998844332222 2366666654
No 147
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.55 E-value=3.4e-07 Score=87.06 Aligned_cols=82 Identities=17% Similarity=0.220 Sum_probs=56.3
Q ss_pred EEEEcCCcHHHHHHHHhccCcccccccccc-cccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCc
Q 010820 395 VYIYSSGSRLAQRLIFGNSNYGDLRKYLSG-FFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLE 473 (500)
Q Consensus 395 l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~-~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~ 473 (500)
+.+.++.........+++++. .+.-.... .++.......|+..+..++++++++ ++++++|||+.||+.+++.+|+.
T Consensus 118 ~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~-~~~~i~~GD~~NDi~m~~~ag~~ 195 (230)
T PRK01158 118 VALRRTVPVEEVRELLEELGL-DLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGID-PEEVAAIGDSENDLEMFEVAGFG 195 (230)
T ss_pred eeecccccHHHHHHHHHHcCC-cEEEEecceEEEEeeCCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHHhcCce
Confidence 445555555566666665521 11111111 1233444566899999999999998 99999999999999999999997
Q ss_pred EEEEc
Q 010820 474 VVISI 478 (500)
Q Consensus 474 ~i~v~ 478 (500)
++.-+
T Consensus 196 vam~N 200 (230)
T PRK01158 196 VAVAN 200 (230)
T ss_pred EEecC
Confidence 65544
No 148
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.49 E-value=2.3e-07 Score=99.32 Aligned_cols=109 Identities=17% Similarity=0.195 Sum_probs=81.2
Q ss_pred cccCCCHHHHHHHHHhCCc-EEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCc
Q 010820 375 GEVFDDVPEALEKWHSLGT-KVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 453 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~-~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~ 453 (500)
.+++||+.++|++|+++|+ +++++||.+.......++++ ++.++|.... .+++ ..++++++.+ +++
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~l---gi~~~f~~~~-----p~~K----~~~i~~l~~~-~~~ 427 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVAREL---GIDEVHAELL-----PEDK----LEIVKELREK-YGP 427 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHc---CChhhhhccC-----cHHH----HHHHHHHHhc-CCE
Confidence 4789999999999999999 99999999999999999999 4555543221 1223 3466666666 789
Q ss_pred EEEEeCCHhhHHHHHHcCCcEEEEcCCCC-CCCCCCCCceee--CCccC
Q 010820 454 ILFVTDVYQEATAAKAAGLEVVISIRPGN-GPLPENHGFKTI--NSFAE 499 (500)
Q Consensus 454 ~l~VGDs~~Di~aA~~aG~~~i~v~~~~~-~~~~~~~~~~~i--~~l~e 499 (500)
++||||+.+|+.+++++|+ .+.++.. .+.....+|+++ +++.+
T Consensus 428 v~~vGDg~nD~~al~~A~v---gia~g~~~~~~~~~~ad~vl~~~~l~~ 473 (536)
T TIGR01512 428 VAMVGDGINDAPALAAADV---GIAMGASGSDVAIETADVVLLNDDLSR 473 (536)
T ss_pred EEEEeCCHHHHHHHHhCCE---EEEeCCCccHHHHHhCCEEEECCCHHH
Confidence 9999999999999999995 5555522 222233347777 66654
No 149
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.46 E-value=3.6e-07 Score=98.37 Aligned_cols=105 Identities=14% Similarity=0.142 Sum_probs=77.8
Q ss_pred cccCCCHHHHHHHHHhCC-cEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCc
Q 010820 375 GEVFDDVPEALEKWHSLG-TKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 453 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G-~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~ 453 (500)
..++||+.++|++|+++| ++++|+||........+++++ ++.++|.... .+++++ ++++++.. +++
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~l---gi~~~f~~~~-----p~~K~~----~v~~l~~~-~~~ 449 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAEL---GIDEVHAELL-----PEDKLA----IVKELQEE-GGV 449 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHh---CCCeeeccCC-----HHHHHH----HHHHHHHc-CCE
Confidence 479999999999999999 999999999999999999999 5555554321 223344 44455445 789
Q ss_pred EEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeC
Q 010820 454 ILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTIN 495 (500)
Q Consensus 454 ~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~ 495 (500)
|+||||+.+|+.+++++| +.+.++...+.....+|+++.
T Consensus 450 v~~vGDg~nD~~al~~A~---vgia~g~~~~~~~~~Ad~vi~ 488 (556)
T TIGR01525 450 VAMVGDGINDAPALAAAD---VGIAMGAGSDVAIEAADIVLL 488 (556)
T ss_pred EEEEECChhHHHHHhhCC---EeEEeCCCCHHHHHhCCEEEe
Confidence 999999999999999999 455555222222223477776
No 150
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.45 E-value=4.5e-07 Score=87.00 Aligned_cols=56 Identities=13% Similarity=0.172 Sum_probs=46.9
Q ss_pred CCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHH
Q 010820 379 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETP 437 (500)
Q Consensus 379 pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~ 437 (500)
||+.++|++|+++|++++|+||+.+..+...++.+ ++..+|+.++ +.....||+|+
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~l---GLd~YFdvIIs~Gdv~~~kp~~e 206 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKV---KLDRYFDIIISGGHKAEEYSTMS 206 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHc---CCCcccCEEEECCccccCCCCcc
Confidence 88999999999999999999999999999999999 6777887666 33455566554
No 151
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=98.40 E-value=4.3e-06 Score=75.81 Aligned_cols=102 Identities=15% Similarity=0.114 Sum_probs=74.7
Q ss_pred ccccCCCHHHHHHHHHhCCc-EEEEEcCCcHHHHHHHHhccCccccccccccccc------ccc-----cC--------C
Q 010820 374 EGEVFDDVPEALEKWHSLGT-KVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFD------TAV-----GN--------K 433 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~-~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d------~~~-----~~--------K 433 (500)
..+..||+.++++.+++.|. .+.|+|..+..+++..+++. ++.++|..+|. ..+ .+ -
T Consensus 82 ~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~---~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~C 158 (256)
T KOG3120|consen 82 SIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAA---GIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLC 158 (256)
T ss_pred cCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHc---cHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcC
Confidence 45788999999999999985 99999999999999999999 67777887772 111 11 1
Q ss_pred C----CHHHHHHHHHH---cCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcC
Q 010820 434 R----ETPSYVEITNS---LGVDKPSEILFVTDVYQEATAAKAAGLEVVISIR 479 (500)
Q Consensus 434 P----~p~~~~~~l~~---l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~ 479 (500)
| +..++.++... -|+. .++.+||||+.+|+-+-....-.-+...|
T Consensus 159 PsNmCKg~Vl~~~~~s~~~~gv~-yer~iYvGDG~nD~CP~l~Lr~~D~ampR 210 (256)
T KOG3120|consen 159 PSNMCKGLVLDELVASQLKDGVR-YERLIYVGDGANDFCPVLRLRACDVAMPR 210 (256)
T ss_pred chhhhhhHHHHHHHHHHhhcCCc-eeeEEEEcCCCCCcCcchhcccCceeccc
Confidence 2 33333333332 2665 77999999999999888776554444444
No 152
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.36 E-value=7.9e-07 Score=84.19 Aligned_cols=83 Identities=14% Similarity=0.091 Sum_probs=58.4
Q ss_pred EEEEEcCCcHHHHHHHHhccCccccccc-ccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCC
Q 010820 394 KVYIYSSGSRLAQRLIFGNSNYGDLRKY-LSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGL 472 (500)
Q Consensus 394 ~l~v~Tn~~~~~~~~~l~~~~~~~l~~~-f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~ 472 (500)
...+.+..........++.++.. +... ....++......+|...+..++++++++ ++++++|||+.||+.+++.+|+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~-~~~~i~~GD~~NDi~m~~~ag~ 186 (225)
T TIGR01482 109 LVKMRYGIDVDTVREIIKELGLN-LVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIK-PGETLVCGDSENDIDLFEVPGF 186 (225)
T ss_pred eEEEeecCCHHHHHHHHHhcCce-EEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCC-HHHEEEECCCHhhHHHHHhcCc
Confidence 34555555666667777776321 1100 0112244445567889999999999998 9999999999999999999999
Q ss_pred cEEEEc
Q 010820 473 EVVISI 478 (500)
Q Consensus 473 ~~i~v~ 478 (500)
.++.-+
T Consensus 187 ~vam~N 192 (225)
T TIGR01482 187 GVAVAN 192 (225)
T ss_pred eEEcCC
Confidence 765554
No 153
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=98.35 E-value=3.7e-07 Score=84.31 Aligned_cols=107 Identities=18% Similarity=0.157 Sum_probs=61.9
Q ss_pred CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHH----HHHHHHhccCcccccccccccc-cccccCCCCHHHHHHHHHHc
Q 010820 372 ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRL----AQRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSL 446 (500)
Q Consensus 372 ~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~----~~~~~l~~~~~~~l~~~f~~~~-d~~~~~KP~p~~~~~~l~~l 446 (500)
....+++||+.++|++|.+.|+.+.++|..+.. ......+.+ ..+|...+ +.....+.+. .+
T Consensus 69 f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl-----~~hf~~i~~~~~~~~~~K~--------~v 135 (191)
T PF06941_consen 69 FSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWL-----ERHFPFIPYDNLIFTGDKT--------LV 135 (191)
T ss_dssp TTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHH-----HHHHTHHHHCCEEEESSGG--------GC
T ss_pred hcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHH-----HHHcCCCchheEEEecCCC--------eE
Confidence 345789999999999999999778877776543 123333323 22233222 2211112221 22
Q ss_pred CCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccC
Q 010820 447 GVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE 499 (500)
Q Consensus 447 ~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e 499 (500)
+.+ ++|+|++..+..+...|+.++.++.++++... ....+.|..|
T Consensus 136 ~~D-----vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~---~~~Rv~~W~e 180 (191)
T PF06941_consen 136 GGD-----VLIDDRPHNLEQFANAGIPVILFDQPYNRDES---NFPRVNNWEE 180 (191)
T ss_dssp --S-----EEEESSSHHHSS-SSESSEEEEE--GGGTT-----TSEEE-STTS
T ss_pred ecc-----EEecCChHHHHhccCCCceEEEEcCCCCCCCC---CCccCCCHHH
Confidence 333 89999999999999999999999998776544 3466666655
No 154
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.34 E-value=2.9e-07 Score=82.50 Aligned_cols=96 Identities=14% Similarity=0.106 Sum_probs=79.1
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccc-cccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~-~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
....||+.++|++|.+. +.++|.|++.+.++..+++.+ +... +|...+ +.....+|+ |.+.+++++.+ +
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~l---dp~~~~f~~~l~r~~~~~~~~~---~~K~L~~l~~~-~ 112 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDIL---DRGGKVISRRLYRESCVFTNGK---YVKDLSLVGKD-L 112 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHH---CcCCCEEeEEEEccccEEeCCC---EEeEchhcCCC-h
Confidence 46889999999999987 999999999999999999998 4443 565555 333333555 77889999997 9
Q ss_pred CcEEEEeCCHhhHHHHHHcCCcEEEEc
Q 010820 452 SEILFVTDVYQEATAAKAAGLEVVISI 478 (500)
Q Consensus 452 ~~~l~VGDs~~Di~aA~~aG~~~i~v~ 478 (500)
++++||||++.++.++..+|+......
T Consensus 113 ~~vIiVDD~~~~~~~~~~NgI~i~~f~ 139 (162)
T TIGR02251 113 SKVIIIDNSPYSYSLQPDNAIPIKSWF 139 (162)
T ss_pred hhEEEEeCChhhhccCccCEeecCCCC
Confidence 999999999999999999998876655
No 155
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.34 E-value=7.7e-07 Score=95.72 Aligned_cols=104 Identities=9% Similarity=0.048 Sum_probs=75.0
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcE
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 454 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~ 454 (500)
.+++||+.++|++|+++|++++++||......+.+.+.+|+ . +|. .. ..+++++. ++++..+ +++|
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi---~-~~~----~~-~p~~K~~~----v~~l~~~-~~~v 469 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGI---N-VRA----EV-LPDDKAAL----IKELQEK-GRVV 469 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCC---c-EEc----cC-ChHHHHHH----HHHHHHc-CCEE
Confidence 46899999999999999999999999999999999999954 2 222 11 12334444 4444445 8899
Q ss_pred EEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeC
Q 010820 455 LFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTIN 495 (500)
Q Consensus 455 l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~ 495 (500)
+||||+.+|+.+++++|+. +.++...+.....+|+++.
T Consensus 470 ~~VGDg~nD~~al~~A~vg---ia~g~g~~~a~~~Advvl~ 507 (562)
T TIGR01511 470 AMVGDGINDAPALAQADVG---IAIGAGTDVAIEAADVVLM 507 (562)
T ss_pred EEEeCCCccHHHHhhCCEE---EEeCCcCHHHHhhCCEEEe
Confidence 9999999999999999963 4444222222223477773
No 156
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=98.33 E-value=5.1e-07 Score=86.30 Aligned_cols=50 Identities=24% Similarity=0.325 Sum_probs=45.6
Q ss_pred ccCCCCHHHHHHHHHHcCCCCCCcE-EEEeCCH-hhHHHHHHcCCcEEEEcCC
Q 010820 430 VGNKRETPSYVEITNSLGVDKPSEI-LFVTDVY-QEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 430 ~~~KP~p~~~~~~l~~l~v~~p~~~-l~VGDs~-~Di~aA~~aG~~~i~v~~~ 480 (500)
...||+|++|+.++++++++ ++++ +||||+. +||.+|+++|+++++|.++
T Consensus 185 ~~~KP~~~~~~~~~~~~~~~-~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 185 VVGKPSPAIYRAALNLLQAR-PERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred eecCCCHHHHHHHHHHhCCC-CccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 35799999999999999998 7776 9999998 8999999999999999764
No 157
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.22 E-value=3.7e-06 Score=79.13 Aligned_cols=81 Identities=17% Similarity=0.218 Sum_probs=58.5
Q ss_pred EEEEEcCCcHHHHHHHHhccCccccccccccc-ccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCC
Q 010820 394 KVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGF-FDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGL 472 (500)
Q Consensus 394 ~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~-~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~ 472 (500)
.+.+.++.........++.. ++..+.... ++.......+...++.++++++++ ++++++|||+.+|+.+++.+|+
T Consensus 109 ~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~-~~~~i~iGDs~ND~~ml~~ag~ 184 (215)
T TIGR01487 109 LVIMREGKDVDEVREIIKER---GLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIK-PEEVAAIGDSENDIDLFRVVGF 184 (215)
T ss_pred EEEecCCccHHHHHHHHHhC---CeEEEecCceEEEecCCCChHHHHHHHHHHhCCC-HHHEEEECCCHHHHHHHHhCCC
Confidence 34455666666667677665 333333222 233333455788999999999998 9999999999999999999998
Q ss_pred cEEEEc
Q 010820 473 EVVISI 478 (500)
Q Consensus 473 ~~i~v~ 478 (500)
.++.-+
T Consensus 185 ~vam~n 190 (215)
T TIGR01487 185 KVAVAN 190 (215)
T ss_pred eEEcCC
Confidence 876655
No 158
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.22 E-value=1.3e-05 Score=78.29 Aligned_cols=90 Identities=12% Similarity=0.024 Sum_probs=59.0
Q ss_pred HHHHhCCcEEEEE---cCCcHHHHHHHHhccCcccccccccccc-cccccCCCCHHHHHHHHHHcCCCCC-CcEEEEeCC
Q 010820 386 EKWHSLGTKVYIY---SSGSRLAQRLIFGNSNYGDLRKYLSGFF-DTAVGNKRETPSYVEITNSLGVDKP-SEILFVTDV 460 (500)
Q Consensus 386 ~~L~~~G~~l~v~---Tn~~~~~~~~~l~~~~~~~l~~~f~~~~-d~~~~~KP~p~~~~~~l~~l~v~~p-~~~l~VGDs 460 (500)
+.++..++...++ ++.........++.. ++.-.....+ +..... .+...+.++++.++++ + +++++|||+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~~i~-~~~~v~~~GDs 216 (273)
T PRK00192 142 RLAKDREFSEPFLWNGSEAAKERFEEALKRL---GLKVTRGGRFLHLLGGG-DKGKAVRWLKELYRRQ-DGVETIALGDS 216 (273)
T ss_pred HHHHhcccCCceeecCchHHHHHHHHHHHHc---CCEEEECCeEEEEeCCC-CHHHHHHHHHHHHhcc-CCceEEEEcCC
Confidence 3344555554444 433344444444443 2221111222 333344 6777899999999998 9 999999999
Q ss_pred HhhHHHHHHcCCcEEEEcCC
Q 010820 461 YQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 461 ~~Di~aA~~aG~~~i~v~~~ 480 (500)
.||+.+++.+|+.++.-|..
T Consensus 217 ~NDi~m~~~ag~~vam~NA~ 236 (273)
T PRK00192 217 PNDLPMLEAADIAVVVPGPD 236 (273)
T ss_pred hhhHHHHHhCCeeEEeCCCC
Confidence 99999999999988877754
No 159
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=98.21 E-value=9.2e-07 Score=84.23 Aligned_cols=118 Identities=12% Similarity=0.116 Sum_probs=80.0
Q ss_pred CCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccc---ccccc--cccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 378 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY---LSGFF--DTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 378 ~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~---f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
|+-...+++.|.+-+. +.++||.+.... ......+.|--.+ +.... +....+||++.++..++++++++ |+
T Consensus 167 y~KL~kA~~yLqnP~c-lflatn~D~~~p--~~~~~~ipG~G~~v~av~~~t~R~P~v~GKP~~~m~~~l~~~~~i~-ps 242 (306)
T KOG2882|consen 167 YPKLMKALNYLQNPGC-LFLATNRDATTP--PTPGVEIPGAGSFVAAVKFATGRQPIVLGKPSTFMFEYLLEKFNID-PS 242 (306)
T ss_pred HHHHHHHHHHhCCCCc-EEEeccCccccC--CCCCeeccCCccHHHHHHHHhcCCCeecCCCCHHHHHHHHHHcCCC-cc
Confidence 4456668888886666 778998765333 1111111121112 11111 23456799999999999999999 99
Q ss_pred cEEEEeCCH-hhHHHHHHcCCcEEEEcCCCCCCC--------CCCCCceeeCCccC
Q 010820 453 EILFVTDVY-QEATAAKAAGLEVVISIRPGNGPL--------PENHGFKTINSFAE 499 (500)
Q Consensus 453 ~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~--------~~~~~~~~i~~l~e 499 (500)
+++||||+. .||.-+++.|++++++-.+.+... ....+||+++++.+
T Consensus 243 Rt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d 298 (306)
T KOG2882|consen 243 RTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGD 298 (306)
T ss_pred eEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHH
Confidence 999999998 899999999999999998844221 11123777776654
No 160
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.19 E-value=5.8e-06 Score=79.56 Aligned_cols=80 Identities=18% Similarity=0.168 Sum_probs=60.5
Q ss_pred CCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccc-cccC------------------CC-----
Q 010820 379 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT-AVGN------------------KR----- 434 (500)
Q Consensus 379 pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~-~~~~------------------KP----- 434 (500)
|++.++|++|+++|++++|+||+.+..+...++.+ ++..+|+.+... .... ||
T Consensus 151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~l---gL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~ 227 (303)
T PHA03398 151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSLKET---KLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDV 227 (303)
T ss_pred hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHc---CCCccccEEEECCCcccccccceeecccceeEEecCceeEeC
Confidence 78899999999999999999999999999999999 556666544411 1011 12
Q ss_pred --------CHHHHHHHHHHcCCCCCCcEEEEeCCH
Q 010820 435 --------ETPSYVEITNSLGVDKPSEILFVTDVY 461 (500)
Q Consensus 435 --------~p~~~~~~l~~l~v~~p~~~l~VGDs~ 461 (500)
.|.+....+++.|+.--+.+-.|+|-.
T Consensus 228 ~~~~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~ 262 (303)
T PHA03398 228 TDVKNLPKSPRVVLWYLRKKGVNYFKTITLVDDLK 262 (303)
T ss_pred CcccCCCCCCeehHHHHHHcCcceeccEEEeccCc
Confidence 567777888888886456677788776
No 161
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.17 E-value=3.3e-06 Score=69.93 Aligned_cols=87 Identities=18% Similarity=0.152 Sum_probs=67.1
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCH---HHHHHHHHHc----
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRET---PSYVEITNSL---- 446 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p---~~~~~~l~~l---- 446 (500)
...+||.++++|+++|.+|+-++.+|=+...-....+..+ ++.+||+..+ .+|+| .|+-++++.+
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral---~~~~yFhy~V-----iePhP~K~~ML~~llr~i~~er 110 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRAL---DLLQYFHYIV-----IEPHPYKFLMLSQLLREINTER 110 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHh---chhhhEEEEE-----ecCCChhHHHHHHHHHHHHHhh
Confidence 4579999999999999999999999988888888888888 7778887555 35544 3555555554
Q ss_pred --CCCCCCcEEEEeCCHhhHHHHHH
Q 010820 447 --GVDKPSEILFVTDVYQEATAAKA 469 (500)
Q Consensus 447 --~v~~p~~~l~VGDs~~Di~aA~~ 469 (500)
.++ |++++|++|....+.--..
T Consensus 111 ~~~ik-P~~Ivy~DDR~iH~~~Iwe 134 (164)
T COG4996 111 NQKIK-PSEIVYLDDRRIHFGNIWE 134 (164)
T ss_pred ccccC-cceEEEEecccccHHHHHH
Confidence 456 9999999999855544433
No 162
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=98.14 E-value=6e-06 Score=68.55 Aligned_cols=113 Identities=16% Similarity=0.205 Sum_probs=90.5
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcE
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 454 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~ 454 (500)
..+|+.+.+.|++|++. +.++|+|+..........+-.|+ . ....| .-.++++-.++++.++-. .+.|
T Consensus 29 Gklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi---~--~~rv~-----a~a~~e~K~~ii~eLkk~-~~k~ 96 (152)
T COG4087 29 GKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGI---P--VERVF-----AGADPEMKAKIIRELKKR-YEKV 96 (152)
T ss_pred cEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCC---c--eeeee-----cccCHHHHHHHHHHhcCC-CcEE
Confidence 47999999999999999 99999999999998888866632 1 11222 234777888899999875 8999
Q ss_pred EEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccC
Q 010820 455 LFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE 499 (500)
Q Consensus 455 l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e 499 (500)
+||||..||+.+-+++.+..+-+...+..+.....+|+++.+..|
T Consensus 97 vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e 141 (152)
T COG4087 97 VMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAE 141 (152)
T ss_pred EEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHH
Confidence 999999999999999999888887766665655666888877654
No 163
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=98.13 E-value=3.4e-06 Score=84.35 Aligned_cols=70 Identities=17% Similarity=0.082 Sum_probs=55.3
Q ss_pred cCCCCHHHHHHHHHHc--------CCC----CCCcEEEEeCCH-hhHHHHHHcCCcEEEEcCC-CCCCCC--CCCCceee
Q 010820 431 GNKRETPSYVEITNSL--------GVD----KPSEILFVTDVY-QEATAAKAAGLEVVISIRP-GNGPLP--ENHGFKTI 494 (500)
Q Consensus 431 ~~KP~p~~~~~~l~~l--------~v~----~p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~-~~~~~~--~~~~~~~i 494 (500)
.+||++.+|+.+++.+ +++ ++++++||||++ .||.+|+++||.+++|.+| ...... ...+++++
T Consensus 231 ~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~vv 310 (321)
T TIGR01456 231 LGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTLIV 310 (321)
T ss_pred cCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCEEE
Confidence 4799999999999888 432 257999999998 9999999999999999887 222221 22348999
Q ss_pred CCccCC
Q 010820 495 NSFAEI 500 (500)
Q Consensus 495 ~~l~el 500 (500)
+|+.|+
T Consensus 311 ~~l~e~ 316 (321)
T TIGR01456 311 NDVFDA 316 (321)
T ss_pred CCHHHH
Confidence 998764
No 164
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.04 E-value=8.8e-06 Score=91.86 Aligned_cols=86 Identities=16% Similarity=0.262 Sum_probs=71.2
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEE
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 455 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l 455 (500)
+++||+.++|++|+++|++++++|+........+.+.+ ++.++|.... |+--.+++++++.. +++++
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~l---gi~~~~~~~~---------p~~K~~~i~~l~~~-~~~v~ 716 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEA---GIDEVIAGVL---------PDGKAEAIKRLQSQ-GRQVA 716 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc---CCCEEEeCCC---------HHHHHHHHHHHhhc-CCEEE
Confidence 78899999999999999999999999999999999998 4444443221 22345677788877 88999
Q ss_pred EEeCCHhhHHHHHHcCCcE
Q 010820 456 FVTDVYQEATAAKAAGLEV 474 (500)
Q Consensus 456 ~VGDs~~Di~aA~~aG~~~ 474 (500)
||||+.||+.+++++|+..
T Consensus 717 ~vGDg~nD~~al~~Agvgi 735 (834)
T PRK10671 717 MVGDGINDAPALAQADVGI 735 (834)
T ss_pred EEeCCHHHHHHHHhCCeeE
Confidence 9999999999999999933
No 165
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=97.89 E-value=0.00012 Score=75.63 Aligned_cols=103 Identities=17% Similarity=0.180 Sum_probs=72.6
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcc------cccccccccccccccCCC--------------
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYG------DLRKYLSGFFDTAVGNKR-------------- 434 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~------~l~~~f~~~~d~~~~~KP-------------- 434 (500)
...-|.+..+|++||++|-++.++||+...++...+..+-.. ++.++||-++ +...||
T Consensus 182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVI--v~A~KP~FF~~~~pfr~vd~ 259 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVI--VDARKPGFFTEGRPFREVDT 259 (448)
T ss_dssp EE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEE--ES--CCHHHCT---EEEEET
T ss_pred ccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEE--EcCCCCcccCCCCceEEEEC
Confidence 345688999999999999999999999999999999888555 6777787666 122344
Q ss_pred --------------------CHHHHHHHHHHcCCCCCCcEEEEeCCH-hhHHHHHHc-CCcEEEEcCC
Q 010820 435 --------------------ETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAA-GLEVVISIRP 480 (500)
Q Consensus 435 --------------------~p~~~~~~l~~l~v~~p~~~l~VGDs~-~Di~aA~~a-G~~~i~v~~~ 480 (500)
.---.....+.++.. .++++||||+. .||...+.. ||.|+.|.+.
T Consensus 260 ~~g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~-g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~E 326 (448)
T PF05761_consen 260 ETGKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWR-GKEVLYFGDHIYGDILKSKKRHGWRTAAIIPE 326 (448)
T ss_dssp TTSSEECS---SS--TC-EEEE--HHHHHHHCT---GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TT
T ss_pred CCCccccccccccccCCCEeecCCHHHHHHHHccC-CCeEEEECCchhhhhhhhccccceEEEEEehh
Confidence 111345667778888 89999999998 899988886 9999999754
No 166
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=97.88 E-value=0.0001 Score=65.05 Aligned_cols=93 Identities=15% Similarity=0.064 Sum_probs=65.0
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc----------------cccccCCCCHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF----------------DTAVGNKRETPS 438 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~----------------d~~~~~KP~p~~ 438 (500)
..+-||.+++++++++++++.+|+|+|....+..+++.....+-....+-++ +....+..++..
T Consensus 72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~v 151 (220)
T COG4359 72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSSV 151 (220)
T ss_pred cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcchh
Confidence 5688999999999999999999999999999999998885221111121111 011111223333
Q ss_pred HHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCC
Q 010820 439 YVEITNSLGVDKPSEILFVTDVYQEATAAKAAGL 472 (500)
Q Consensus 439 ~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~ 472 (500)
.+.+.-. ++.++|.||+..|+.+|+....
T Consensus 152 ----I~~l~e~-~e~~fy~GDsvsDlsaaklsDl 180 (220)
T COG4359 152 ----IHELSEP-NESIFYCGDSVSDLSAAKLSDL 180 (220)
T ss_pred ----HHHhhcC-CceEEEecCCcccccHhhhhhh
Confidence 3444444 8889999999999999988655
No 167
>KOG3699 consensus Cytoskeletal protein Adducin [Signal transduction mechanisms; Cytoskeleton]
Probab=97.88 E-value=1.1e-05 Score=83.19 Aligned_cols=176 Identities=19% Similarity=0.225 Sum_probs=117.2
Q ss_pred HcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCCC-CCCCCCCCCChHHHHH
Q 010820 43 TLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKPY-PHKPPKCSDCAPLFMK 121 (500)
Q Consensus 43 ~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p~-~~~p~~~S~e~~~H~~ 121 (500)
..+|..++.+++.+|+.+ +-+..-++++|.+..+.+....+...+|.+|....+....-- ..+ +.-...|.+
T Consensus 363 ~~~~ne~s~~~~pVrIed---P~qfvp~~~NP~Evle~rnkIreqnr~D~ksAGPQSqlL~~V~~e~----s~~~~~~Sa 435 (598)
T KOG3699|consen 363 KEDWNEGSASHTPVRIED---PNQFVPLLINPKEVLEMRNKIREQNRQDVKSAGPQSQLLASVTAEK----SRSLSTHSA 435 (598)
T ss_pred eccccccccCCceeeccC---CCCccccccCHHHHHHHHhhHHHhhhccccccCCCcceecceeccc----ccccchhhh
Confidence 346888999999999864 123347999999999999999999999998765543211000 011 222448999
Q ss_pred HHhhC-CccEEEecCchHHHHHHhhcCCCcccccchhhHhhhhcCCc-ccCcceeeeeeCCCCchhHHHHHHHHHhhCCC
Q 010820 122 AYEKR-DAGAVIHSHGIESCLVTMINPMSKEFRITHMEMIKGIKGHG-YYDELVVPIIENTAYENELTDSLAKAIDAYPK 199 (500)
Q Consensus 122 iy~~~-~~~av~H~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~vp~~~~~~~~~~l~~~v~~~l~~~~~ 199 (500)
|++.+ +++||+|.|.+....-++... .+.....+..+ .+.+ +++...++.- ++.. + +.+. .
T Consensus 436 i~~~r~e~k~v~h~~~~pnpf~~ltd~---eL~EYkqever--k~~~~~~d~d~~~~d---~~e~--a----kd~~---~ 498 (598)
T KOG3699|consen 436 IHQVRPEVKCVCHRHYPPNPFVSLTDH---ELLEYKQEVER--KGKGVYHDYDGILSD---PGEQ--A----KDLA---D 498 (598)
T ss_pred hhhcCCcccceeecccCCCcccccCch---hhhhhhhhhhc--cCccccccccccccc---cccc--c----cccc---c
Confidence 99999 999999999998866666543 22211222221 1211 2221112221 1111 1 2233 3
Q ss_pred ccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 010820 200 ATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDW 244 (500)
Q Consensus 200 ~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~ 244 (500)
.+ ++++|||+.+.|++++ |...+...|-+|+.+.....++.+.
T Consensus 499 ~p-v~~~nh~i~Tq~~~V~-aa~~~sl~~~a~~~q~s~as~~~~~ 541 (598)
T KOG3699|consen 499 SP-VILRNHGIMTQGESVE-AAYLLSLMELACETQLSIASATAPG 541 (598)
T ss_pred CC-cccccccceecccccc-cchhhHHHHHHHHhhhhhccccCCC
Confidence 57 9999999999999999 8888999999999998877776553
No 168
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=97.83 E-value=4.6e-05 Score=72.22 Aligned_cols=90 Identities=16% Similarity=0.134 Sum_probs=56.2
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCc---HHHHHHHHhccCcccccccccccccccccC---CC-CHHHHHHHHHHcC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGS---RLAQRLIFGNSNYGDLRKYLSGFFDTAVGN---KR-ETPSYVEITNSLG 447 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~---~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~---KP-~p~~~~~~l~~l~ 447 (500)
.+++||+.++++.++++|+.++++||.+ +.....-|.+.|+.++..++-..... ... .. +..-...+.++ |
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~-~~~~~~~~yK~~~r~~i~~~-G 191 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKD-PSKKSAVEYKSERRKEIEKK-G 191 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESS-TSS------SHHHHHHHHHT-T
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccc-cccccccccchHHHHHHHHc-C
Confidence 3799999999999999999999999966 44555667677533333322111111 001 01 33444444444 3
Q ss_pred CCCCCcEEEEeCCHhhHHHHHH
Q 010820 448 VDKPSEILFVTDVYQEATAAKA 469 (500)
Q Consensus 448 v~~p~~~l~VGDs~~Di~aA~~ 469 (500)
.. =+++|||..+|+..++.
T Consensus 192 y~---Ii~~iGD~~~D~~~~~~ 210 (229)
T PF03767_consen 192 YR---IIANIGDQLSDFSGAKT 210 (229)
T ss_dssp EE---EEEEEESSGGGCHCTHH
T ss_pred Cc---EEEEeCCCHHHhhcccc
Confidence 32 35789999999998443
No 169
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=97.83 E-value=2.9e-05 Score=88.14 Aligned_cols=117 Identities=16% Similarity=0.108 Sum_probs=85.9
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccc------------------cccccCCCCHH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF------------------DTAVGNKRETP 437 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~------------------d~~~~~KP~p~ 437 (500)
+++||+.++|+.|++.|+++.++|+........+.+..|+ ...+.... +......+.|+
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi---~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~ 604 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGM---PSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPE 604 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC---CCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHH
Confidence 7899999999999999999999999999999999999954 33222111 01123456777
Q ss_pred HHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCC-CCCCCCCceee--CCccC
Q 010820 438 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNG-PLPENHGFKTI--NSFAE 499 (500)
Q Consensus 438 ~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~-~~~~~~~~~~i--~~l~e 499 (500)
--..+.+.++-. .+.++||||+.||+.+.+++++ ++..+... +.....+|+++ +||+.
T Consensus 605 ~K~~iv~~lq~~-g~~v~mvGDGvND~pAl~~AdV---Gia~g~~g~~va~~aaDivl~dd~~~~ 665 (884)
T TIGR01522 605 HKMKIVKALQKR-GDVVAMTGDGVNDAPALKLADI---GVAMGQTGTDVAKEAADMILTDDDFAT 665 (884)
T ss_pred HHHHHHHHHHHC-CCEEEEECCCcccHHHHHhCCe---eEecCCCcCHHHHHhcCEEEcCCCHHH
Confidence 778888888776 7899999999999999999995 44444222 12223448887 44543
No 170
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=97.80 E-value=4.8e-05 Score=62.35 Aligned_cols=84 Identities=12% Similarity=0.068 Sum_probs=48.9
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHH---HHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRL---AQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~---~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
.++||+.++|+.|+++|.++.++||++.. .....++.+| +.--.+.++. ........+++. .. ..
T Consensus 14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~G---i~~~~~~i~t-------s~~~~~~~l~~~-~~-~~ 81 (101)
T PF13344_consen 14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLG---IPVDEDEIIT-------SGMAAAEYLKEH-KG-GK 81 (101)
T ss_dssp EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTT---TT--GGGEEE-------HHHHHHHHHHHH-TT-SS
T ss_pred CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcC---cCCCcCEEEC-------hHHHHHHHHHhc-CC-CC
Confidence 38999999999999999999999998743 3444456663 2211222221 233444444443 22 55
Q ss_pred cEEEEeCCHhhHHHHHHcCC
Q 010820 453 EILFVTDVYQEATAAKAAGL 472 (500)
Q Consensus 453 ~~l~VGDs~~Di~aA~~aG~ 472 (500)
.+++||-. ...+..+.+|+
T Consensus 82 ~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 82 KVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp EEEEES-H-HHHHHHHHTTE
T ss_pred EEEEEcCH-HHHHHHHHcCC
Confidence 88888854 44444555553
No 171
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.80 E-value=0.00012 Score=70.58 Aligned_cols=53 Identities=15% Similarity=0.162 Sum_probs=46.3
Q ss_pred cccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 427 DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 427 d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
+......+|...++.++++++++ +++|++|||+.||+.+.+.++..++.+...
T Consensus 160 di~~~~~~K~~al~~l~~~~~i~-~~~~i~~GD~~ND~~ml~~~~~~~va~~na 212 (249)
T TIGR01485 160 DILPQGSGKGQALQYLLQKLAME-PSQTLVCGDSGNDIELFEIGSVRGVIVSNA 212 (249)
T ss_pred EEEeCCCChHHHHHHHHHHcCCC-ccCEEEEECChhHHHHHHccCCcEEEECCC
Confidence 44556788999999999999998 999999999999999999988778877654
No 172
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=97.76 E-value=0.00019 Score=70.02 Aligned_cols=43 Identities=9% Similarity=0.232 Sum_probs=39.1
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEc
Q 010820 435 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISI 478 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~ 478 (500)
|...++.+++.+|++ +++++.|||+.||+++-+.+|...+.-+
T Consensus 189 Kg~al~~l~~~~gi~-~~~v~afGD~~NDi~Ml~~ag~~vAm~N 231 (272)
T PRK15126 189 KGAALAVLSQHLGLS-LADCMAFGDAMNDREMLGSVGRGFIMGN 231 (272)
T ss_pred hHHHHHHHHHHhCCC-HHHeEEecCCHHHHHHHHHcCCceeccC
Confidence 888999999999998 9999999999999999999998665554
No 173
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.72 E-value=0.00025 Score=63.10 Aligned_cols=96 Identities=10% Similarity=0.104 Sum_probs=61.0
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHH---HHHhcc---Cccccc--cccc---ccc----cccccCCC---CHHH
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQR---LIFGNS---NYGDLR--KYLS---GFF----DTAVGNKR---ETPS 438 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~---~~l~~~---~~~~l~--~~f~---~~~----d~~~~~KP---~p~~ 438 (500)
..|++.+++++|+++|+++.++|+.+..... ..++.+ +. ++. ..+. ..+ ......+| +.+.
T Consensus 28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~-~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~~ 106 (157)
T smart00775 28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGH-NLPHGPVLLSPDRLFAALHREVISKKPEVFKIAC 106 (157)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccc-cCCCceEEEcCCcchhhhhcccccCCHHHHHHHH
Confidence 4688999999999999999999999876663 455441 10 111 1110 011 11223445 5566
Q ss_pred HHHHHHHcCCCCCCcE-EEEeCCHhhHHHHHHcCCcE
Q 010820 439 YVEITNSLGVDKPSEI-LFVTDVYQEATAAKAAGLEV 474 (500)
Q Consensus 439 ~~~~l~~l~v~~p~~~-l~VGDs~~Di~aA~~aG~~~ 474 (500)
...+.+.+.-. .-.. +-+||+.+|+++=+++|+..
T Consensus 107 l~~i~~~~~~~-~~~f~~~~gn~~~D~~~y~~~gi~~ 142 (157)
T smart00775 107 LRDIKSLFPPQ-GNPFYAGFGNRITDVISYSAVGIPP 142 (157)
T ss_pred HHHHHHhcCCC-CCCEEEEeCCCchhHHHHHHcCCCh
Confidence 66766665422 2233 33778899999999999987
No 174
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=97.70 E-value=0.00034 Score=68.59 Aligned_cols=87 Identities=16% Similarity=0.241 Sum_probs=55.3
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCc---HHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCc
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGS---RLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 453 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~---~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~ 453 (500)
++||+.++|++|+++|.+++++||++ +......++.+| +....+.++ +........+++.... +.+
T Consensus 19 ~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G---~~~~~~~i~-------ts~~~~~~~l~~~~~~-~~~ 87 (279)
T TIGR01452 19 VVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLG---FNGLAEQLF-------SSALCAARLLRQPPDA-PKA 87 (279)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcC---CCCChhhEe-------cHHHHHHHHHHhhCcC-CCE
Confidence 78889999999999999999999976 333334555663 221112211 1233444555664444 678
Q ss_pred EEEEeCCHhhHHHHHHcCCcEE
Q 010820 454 ILFVTDVYQEATAAKAAGLEVV 475 (500)
Q Consensus 454 ~l~VGDs~~Di~aA~~aG~~~i 475 (500)
++++|+.. ..+..+..|+..+
T Consensus 88 v~~iG~~~-~~~~l~~~g~~~~ 108 (279)
T TIGR01452 88 VYVIGEEG-LRAELDAAGIRLA 108 (279)
T ss_pred EEEEcCHH-HHHHHHHCCCEEe
Confidence 99999863 3445567787754
No 175
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=97.67 E-value=0.0004 Score=65.15 Aligned_cols=97 Identities=11% Similarity=0.084 Sum_probs=57.8
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHH---HHHHHhccCcccccccccccccccccCCC----CHHHHHHHHHHc
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLA---QRLIFGNSNYGDLRKYLSGFFDTAVGNKR----ETPSYVEITNSL 446 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~---~~~~l~~~~~~~l~~~f~~~~d~~~~~KP----~p~~~~~~l~~l 446 (500)
+.++.|++.++++.|+++|++++++||.+... ...-|.+.|+.++..++-.-. ....|+ |.+...++.+ -
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~~--~d~~~~~~~yKs~~R~~l~~-~ 194 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGL--EDSNKTVVTYKSEVRKSLME-E 194 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecCC--CCCCchHhHHHHHHHHHHHh-C
Confidence 45799999999999999999999999998655 556666775443322211111 111222 2223322221 1
Q ss_pred CCCCCCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 010820 447 GVDKPSEILFVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 447 ~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v 477 (500)
|. .=+..|||..+|+.+. .+|.++.-+
T Consensus 195 GY---rIv~~iGDq~sDl~G~-~~~~RtFKL 221 (229)
T TIGR01675 195 GY---RIWGNIGDQWSDLLGS-PPGRRTFKL 221 (229)
T ss_pred Cc---eEEEEECCChHHhcCC-CccCceeeC
Confidence 22 1346689999999653 344444443
No 176
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=97.63 E-value=0.00024 Score=68.98 Aligned_cols=49 Identities=16% Similarity=0.219 Sum_probs=42.4
Q ss_pred ccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcC
Q 010820 430 VGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIR 479 (500)
Q Consensus 430 ~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~ 479 (500)
...--|....+.++++++++ +++++.|||+.||+++-+.+|...+.-+.
T Consensus 185 ~~g~~K~~al~~l~~~lgi~-~~~v~afGD~~ND~~Ml~~ag~gvam~Na 233 (264)
T COG0561 185 PKGVSKGYALQRLAKLLGIK-LEEVIAFGDSTNDIEMLEVAGLGVAMGNA 233 (264)
T ss_pred cCCCchHHHHHHHHHHhCCC-HHHeEEeCCccccHHHHHhcCeeeeccCC
Confidence 33445888999999999998 99999999999999999999987766654
No 177
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=97.56 E-value=0.00058 Score=66.54 Aligned_cols=51 Identities=16% Similarity=0.289 Sum_probs=43.2
Q ss_pred cccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEc
Q 010820 427 DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISI 478 (500)
Q Consensus 427 d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~ 478 (500)
|.....-.|...++.+++.+|++ +++++.|||+.||+++.+.+|...+.-+
T Consensus 189 eI~~~gvsKg~al~~l~~~~gi~-~~~v~afGD~~NDi~Ml~~ag~~vAm~N 239 (270)
T PRK10513 189 EILDKRVNKGTGVKSLAEHLGIK-PEEVMAIGDQENDIAMIEYAGVGVAMGN 239 (270)
T ss_pred EEeCCCCChHHHHHHHHHHhCCC-HHHEEEECCchhhHHHHHhCCceEEecC
Confidence 44444455889999999999998 9999999999999999999999666554
No 178
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.49 E-value=0.00043 Score=66.05 Aligned_cols=49 Identities=16% Similarity=0.156 Sum_probs=42.7
Q ss_pred cccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 427 DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 427 d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
+......+|+..+..++++++++ ++++++|||+.||+.+.+.+|...+.
T Consensus 152 ei~~~~~~K~~al~~l~~~~g~~-~~~~i~~GD~~nD~~ml~~~~~~iav 200 (236)
T TIGR02471 152 DVLPLRASKGLALRYLSYRWGLP-LEQILVAGDSGNDEEMLRGLTLGVVV 200 (236)
T ss_pred EEeeCCCChHHHHHHHHHHhCCC-HHHEEEEcCCccHHHHHcCCCcEEEE
Confidence 44555688999999999999998 99999999999999999999876654
No 179
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=97.46 E-value=0.00042 Score=77.09 Aligned_cols=84 Identities=19% Similarity=0.210 Sum_probs=65.9
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCC--CHHHHHHHHHHcCCCCCCc
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKR--ETPSYVEITNSLGVDKPSE 453 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP--~p~~~~~~l~~l~v~~p~~ 453 (500)
+++||+.++|++|+++|++++++|+........+.+.+|+ ..++ + ..| |++ ++++++ . +..
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi---~~~~----~----~~p~~K~~----~v~~l~-~-~~~ 630 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI---DFRA----G----LLPEDKVK----AVTELN-Q-HAP 630 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC---Ceec----C----CCHHHHHH----HHHHHh-c-CCC
Confidence 7899999999999999999999999999999999999953 2212 1 122 333 445555 3 568
Q ss_pred EEEEeCCHhhHHHHHHcCCcEEE
Q 010820 454 ILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 454 ~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
++||||+.||..+.+.+++...+
T Consensus 631 v~mvGDgiNDapAl~~A~vgia~ 653 (741)
T PRK11033 631 LAMVGDGINDAPAMKAASIGIAM 653 (741)
T ss_pred EEEEECCHHhHHHHHhCCeeEEe
Confidence 99999999999999999954433
No 180
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=97.43 E-value=0.0048 Score=59.29 Aligned_cols=104 Identities=14% Similarity=0.269 Sum_probs=73.2
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHH---HhccCcccccccc-c--ccc----------------cc--cccC
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLI---FGNSNYGDLRKYL-S--GFF----------------DT--AVGN 432 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~---l~~~~~~~l~~~f-~--~~~----------------d~--~~~~ 432 (500)
.-+.+.+++..|.++|+++..+|.......... |+.+|+ ++.... . .++ +. ....
T Consensus 82 ie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi-~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~ 160 (252)
T PF11019_consen 82 IESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGI-DFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGG 160 (252)
T ss_pred cchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCC-CccccccccCcceecccccCCCCCCceeecCeEEeCC
Confidence 447889999999999999999999886655444 444443 111110 0 000 00 1223
Q ss_pred CCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHH----HcCCcEEEEcCCCC
Q 010820 433 KRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAK----AAGLEVVISIRPGN 482 (500)
Q Consensus 433 KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~----~aG~~~i~v~~~~~ 482 (500)
-++..++...+.+.+.. |+.++||+|+..++.+.. ..|+.++++...+.
T Consensus 161 ~~KG~~L~~fL~~~~~~-pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~~ 213 (252)
T PF11019_consen 161 QDKGEVLKYFLDKINQS-PKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTGA 213 (252)
T ss_pred CccHHHHHHHHHHcCCC-CCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcch
Confidence 55889999999999998 999999999997665544 47999998877643
No 181
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.33 E-value=0.0063 Score=59.36 Aligned_cols=51 Identities=10% Similarity=-0.022 Sum_probs=42.6
Q ss_pred cccccCCCCHHHHHHHHHHcCC---CCCCcEEEEeCCHhhHHHHHHcCCcEEEEc
Q 010820 427 DTAVGNKRETPSYVEITNSLGV---DKPSEILFVTDVYQEATAAKAAGLEVVISI 478 (500)
Q Consensus 427 d~~~~~KP~p~~~~~~l~~l~v---~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~ 478 (500)
+.....-.|....+.+++.+++ + +++++.|||+.||+.+-+.+|...+.-+
T Consensus 180 Ei~~~g~sKg~al~~l~~~lgi~~~~-~~~viafGDs~NDi~Ml~~ag~gvAM~~ 233 (271)
T PRK03669 180 HVLDASAGKDQAANWLIATYQQLSGT-RPTTLGLGDGPNDAPLLDVMDYAVVVKG 233 (271)
T ss_pred EEecCCCCHHHHHHHHHHHHHhhcCC-CceEEEEcCCHHHHHHHHhCCEEEEecC
Confidence 4333445588899999999999 8 9999999999999999999998666553
No 182
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=97.27 E-value=0.00062 Score=77.63 Aligned_cols=118 Identities=14% Similarity=0.162 Sum_probs=81.4
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccc-----cccc-----cc---------cccccCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-----YLSG-----FF---------DTAVGNKRE 435 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~-----~f~~-----~~---------d~~~~~KP~ 435 (500)
-+++|++.++|+.|++.|+++.++|+........+.+..|+..-.. .+++ .. ......+-.
T Consensus 536 Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~ 615 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVE 615 (917)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecC
Confidence 3789999999999999999999999999999999999996532100 1111 00 011122334
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCC
Q 010820 436 TPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINS 496 (500)
Q Consensus 436 p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~ 496 (500)
|+-=.++++.++-. .+.+.|+||+.||+.+.+.+++.... .. + .+.....+|+++.+
T Consensus 616 P~~K~~iV~~lq~~-g~~va~iGDG~ND~~alk~AdVGia~-g~-g-~~~ak~aAD~vl~d 672 (917)
T TIGR01116 616 PSHKSELVELLQEQ-GEIVAMTGDGVNDAPALKKADIGIAM-GS-G-TEVAKEASDMVLAD 672 (917)
T ss_pred HHHHHHHHHHHHhc-CCeEEEecCCcchHHHHHhCCeeEEC-CC-C-cHHHHHhcCeEEcc
Confidence 45456777777765 78999999999999999999994332 21 2 22223344888876
No 183
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=97.23 E-value=0.00081 Score=58.52 Aligned_cols=95 Identities=18% Similarity=0.192 Sum_probs=66.7
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccc-ccccccccccCCCCHHHHHHHHHHcCCCCCCcE
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY-LSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 454 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~-f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~ 454 (500)
.+-.++...|..|+++ .+++-+|.......+.....+ ..... ++..+-.....| ..+.+.++++
T Consensus 72 l~~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT~~~l---~~q~ih~~~l~i~g~h~K------V~~vrth~id----- 136 (194)
T COG5663 72 LLAQLVKQVLPSLKEE-HRLIYITARKADLTRITYAWL---FIQNIHYDHLEIVGLHHK------VEAVRTHNID----- 136 (194)
T ss_pred HHHHHHHHHhHHHHhh-ceeeeeehhhHHHHHHHHHHH---HHhccchhhhhhhccccc------chhhHhhccC-----
Confidence 4557788999999886 678888987777766655444 22222 333321112222 4577888888
Q ss_pred EEEeCCH-hhHHHHHHcCCcEEEEcCCCCCCC
Q 010820 455 LFVTDVY-QEATAAKAAGLEVVISIRPGNGPL 485 (500)
Q Consensus 455 l~VGDs~-~Di~aA~~aG~~~i~v~~~~~~~~ 485 (500)
+|+.|+. +-++.|+++|++.+.++.++++..
T Consensus 137 lf~ed~~~na~~iAk~~~~~vilins~ynRkp 168 (194)
T COG5663 137 LFFEDSHDNAGQIAKNAGIPVILINSPYNRKP 168 (194)
T ss_pred ccccccCchHHHHHHhcCCcEEEecCcccccc
Confidence 9999997 889999999999999999866543
No 184
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=97.22 E-value=0.0017 Score=62.04 Aligned_cols=102 Identities=14% Similarity=0.187 Sum_probs=57.4
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHH---HHHHHHhccCcccccccccccccccccCCCCHHHHHHH-HH---Hc
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRL---AQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEI-TN---SL 446 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~---~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~-l~---~l 446 (500)
..++.|++.++++.++++|+++.++||.... ....-|++.|+.+...++-. +.....+.+.--|... .+ +-
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~~~LiLR--~~~D~~~~~av~yKs~~R~~li~e 220 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTWEKLILK--DPQDNSAENAVEYKTAARAKLIQE 220 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCcceeeec--CCCCCccchhHHHHHHHHHHHHHc
Confidence 4578999999999999999999999998853 33444555543332222111 1111112222222211 11 12
Q ss_pred CCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 447 GVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 447 ~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
|. .=+..|||..+|+.+....+-++.-+..+
T Consensus 221 GY---rIv~~iGDq~sDl~G~~~g~~RtFKLPNP 251 (275)
T TIGR01680 221 GY---NIVGIIGDQWNDLKGEHRGAIRSFKLPNP 251 (275)
T ss_pred Cc---eEEEEECCCHHhccCCCccCcceecCCCc
Confidence 22 23466899999996554223455555443
No 185
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=97.16 E-value=0.0017 Score=57.05 Aligned_cols=91 Identities=14% Similarity=0.234 Sum_probs=57.2
Q ss_pred HHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccc-ccccc-cccccCCCCHHHHHH--HHHHcCCCCCCcEEE
Q 010820 381 VPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY-LSGFF-DTAVGNKRETPSYVE--ITNSLGVDKPSEILF 456 (500)
Q Consensus 381 v~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~-f~~~~-d~~~~~KP~p~~~~~--~l~~l~v~~p~~~l~ 456 (500)
++++++.-.++|=.++.+|+..+.-.+-+-+.+. .+| +.... -...+.||+|.-|.+ .+...++. ++
T Consensus 119 A~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~La----k~F~i~~m~pv~f~Gdk~k~~qy~Kt~~i~~~~~~-----Ih 189 (237)
T COG3700 119 ARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLA----KNFHITNMNPVIFAGDKPKPGQYTKTQWIQDKNIR-----IH 189 (237)
T ss_pred HHHHHHHHHhcCCeEEEEecCCCCcccccchhHH----hhcccCCCcceeeccCCCCcccccccHHHHhcCce-----EE
Confidence 5677777778899999999977653333222220 011 11111 001234665554433 34444444 89
Q ss_pred EeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 457 VTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 457 VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
-||+.+||.+|+.+|++.|.+.|.
T Consensus 190 YGDSD~Di~AAkeaG~RgIRilRA 213 (237)
T COG3700 190 YGDSDNDITAAKEAGARGIRILRA 213 (237)
T ss_pred ecCCchhhhHHHhcCccceeEEec
Confidence 999999999999999999999886
No 186
>PLN02645 phosphoglycolate phosphatase
Probab=97.05 E-value=0.0037 Score=62.26 Aligned_cols=89 Identities=17% Similarity=0.226 Sum_probs=63.6
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHH---HHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCc
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQ---RLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 453 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~---~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~ 453 (500)
++||+.++|+.|+++|++++++||++.... ...++.+ |+.-.++.++. ........+++.+.. ...
T Consensus 45 ~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~l---Gi~~~~~~I~t-------s~~~~~~~l~~~~~~-~~~ 113 (311)
T PLN02645 45 LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESL---GLNVTEEEIFS-------SSFAAAAYLKSINFP-KDK 113 (311)
T ss_pred cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHC---CCCCChhhEee-------hHHHHHHHHHhhccC-CCC
Confidence 789999999999999999999999884333 3344555 33322333331 223555666666664 556
Q ss_pred EEEEeCCHhhHHHHHHcCCcEEE
Q 010820 454 ILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 454 ~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
.+||+++..+.+.++.+|+.++.
T Consensus 114 ~V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 114 KVYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred EEEEEcCHHHHHHHHHCCCEEec
Confidence 78888899999999999998765
No 187
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.95 E-value=0.0099 Score=51.03 Aligned_cols=47 Identities=17% Similarity=0.011 Sum_probs=37.4
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEEcCCC
Q 010820 435 ETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAAGLEVVISIRPG 481 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~p~~~l~VGDs~-~Di~aA~~aG~~~i~v~~~~ 481 (500)
..+.+......-.+..+++++||||.+ .||..|...|-..||..++.
T Consensus 123 t~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv 170 (190)
T KOG2961|consen 123 TAEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGV 170 (190)
T ss_pred cHHHHHHHhCCcccCChhHeEEEccchhhhHhhhhhccceeEEecccc
Confidence 455555555444454489999999998 99999999999999998873
No 188
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.82 E-value=0.011 Score=60.07 Aligned_cols=90 Identities=12% Similarity=0.176 Sum_probs=70.0
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccccc---ccccccccCCCCHHHHHHHHHHcCCCCCCc
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS---GFFDTAVGNKRETPSYVEITNSLGVDKPSE 453 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~---~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~ 453 (500)
+|....+.+..|+++|+-++|+|-+....+..++.+.+ +.+- ++-.....=-|+.+-+.++++++++- .+.
T Consensus 256 ~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp-----~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg-~dS 329 (574)
T COG3882 256 AFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHP-----DMILKEEDFAVFQINWDPKAENIRKIAKKLNLG-LDS 329 (574)
T ss_pred hHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCC-----CeEeeHhhhhhheecCCcchhhHHHHHHHhCCC-ccc
Confidence 33334578999999999999999999999888886663 2211 11122344588999999999999998 999
Q ss_pred EEEEeCCHhhHHHHHHcCC
Q 010820 454 ILFVTDVYQEATAAKAAGL 472 (500)
Q Consensus 454 ~l~VGDs~~Di~aA~~aG~ 472 (500)
.+||+|++...+--++-+-
T Consensus 330 mvFiDD~p~ErE~vk~~~~ 348 (574)
T COG3882 330 MVFIDDNPAERELVKRELP 348 (574)
T ss_pred eEEecCCHHHHHHHHhcCc
Confidence 9999999988888888765
No 189
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=96.74 E-value=0.0032 Score=55.86 Aligned_cols=78 Identities=17% Similarity=0.161 Sum_probs=57.1
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccc-cc-cccc--cccccCCCCHHHHHHHH-HHcCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-YL-SGFF--DTAVGNKRETPSYVEIT-NSLGV 448 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~-~f-~~~~--d~~~~~KP~p~~~~~~l-~~l~v 448 (500)
...++||+.++|++|++. ++++|+||+.+.++..+++.+ +... +| +.++ +... .+ +.+-+ ..++.
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~l---dp~~~~F~~ri~~rd~~~--~~----~~KdL~~i~~~ 125 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLI---DPDGKYFGDRIISRDESG--SP----HTKSLLRLFPA 125 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHh---CcCCCeeccEEEEeccCC--CC----ccccHHHHcCC
Confidence 357999999999999854 999999999999999999999 5553 56 3333 2211 11 12223 33466
Q ss_pred CCCCcEEEEeCCHh
Q 010820 449 DKPSEILFVTDVYQ 462 (500)
Q Consensus 449 ~~p~~~l~VGDs~~ 462 (500)
+ .+.+++|+|++.
T Consensus 126 d-~~~vvivDd~~~ 138 (156)
T TIGR02250 126 D-ESMVVIIDDRED 138 (156)
T ss_pred C-cccEEEEeCCHH
Confidence 6 889999999984
No 190
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=96.68 E-value=0.0058 Score=66.61 Aligned_cols=88 Identities=14% Similarity=0.229 Sum_probs=68.1
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEE
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 455 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l 455 (500)
++.|++++.+++|+++|+++.++|+........+.+.+| +.+++. +.+| +-=..+++++.-. .+.+.
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lG---I~~v~a-------~~~P--edK~~~v~~lq~~-g~~Va 512 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAG---VDDFIA-------EATP--EDKIALIRQEQAE-GKLVA 512 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC---CCEEEc-------CCCH--HHHHHHHHHHHHc-CCeEE
Confidence 788999999999999999999999999999999999994 433332 2334 2223344444333 56799
Q ss_pred EEeCCHhhHHHHHHcCCcEEE
Q 010820 456 FVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 456 ~VGDs~~Di~aA~~aG~~~i~ 476 (500)
|+||+.||..+-+.+++....
T Consensus 513 mvGDG~NDapAL~~AdvGiAm 533 (675)
T TIGR01497 513 MTGDGTNDAPALAQADVGVAM 533 (675)
T ss_pred EECCCcchHHHHHhCCEeEEe
Confidence 999999999999999887654
No 191
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=96.60 E-value=0.0024 Score=61.81 Aligned_cols=39 Identities=10% Similarity=0.108 Sum_probs=31.9
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHH---HHHHHHhccCc
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRL---AQRLIFGNSNY 415 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~---~~~~~l~~~~~ 415 (500)
++|++.++|++|+++|++++++||++.. .....++.+|+
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~ 63 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGF 63 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCC
Confidence 7889999999999999999999997654 45566666643
No 192
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=96.59 E-value=0.0088 Score=65.28 Aligned_cols=88 Identities=10% Similarity=0.206 Sum_probs=69.7
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEE
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 455 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l 455 (500)
++.|++++.+++||+.|+++.++|+........+-+.+| +.++|. +. .|+-=.++.+++.-. .+-+.
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elG---I~~v~A-------~~--~PedK~~iV~~lQ~~-G~~Va 507 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAG---VDRFVA-------EC--KPEDKINVIREEQAK-GHIVA 507 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC---CceEEc-------CC--CHHHHHHHHHHHHhC-CCEEE
Confidence 788999999999999999999999999999999999994 443332 12 344445566666554 66789
Q ss_pred EEeCCHhhHHHHHHcCCcEEE
Q 010820 456 FVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 456 ~VGDs~~Di~aA~~aG~~~i~ 476 (500)
|+||+.||..+-+++.+....
T Consensus 508 MtGDGvNDAPALa~ADVGIAM 528 (673)
T PRK14010 508 MTGDGTNDAPALAEANVGLAM 528 (673)
T ss_pred EECCChhhHHHHHhCCEEEEe
Confidence 999999999999999875433
No 193
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=96.51 E-value=0.0087 Score=65.54 Aligned_cols=87 Identities=22% Similarity=0.254 Sum_probs=66.9
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEE
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 455 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l 455 (500)
++.|++.+++++|+++|+++.++|+.++...+.+-+.+ |+.+++.. .+| +=-....+++.-. .+.++
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~l---GId~v~Ae-------llP--edK~~~V~~l~~~-g~~Va 603 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKEL---GIDEVRAE-------LLP--EDKAEIVRELQAE-GRKVA 603 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc---ChHhhecc-------CCc--HHHHHHHHHHHhc-CCEEE
Confidence 78899999999999999999999999999999999999 44444322 233 2223455555544 67899
Q ss_pred EEeCCHhhHHHHHHcCCcEE
Q 010820 456 FVTDVYQEATAAKAAGLEVV 475 (500)
Q Consensus 456 ~VGDs~~Di~aA~~aG~~~i 475 (500)
||||..||--+-..+.+...
T Consensus 604 mVGDGINDAPALA~AdVGiA 623 (713)
T COG2217 604 MVGDGINDAPALAAADVGIA 623 (713)
T ss_pred EEeCCchhHHHHhhcCeeEe
Confidence 99999999988887765443
No 194
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=96.51 E-value=0.01 Score=64.88 Aligned_cols=89 Identities=13% Similarity=0.204 Sum_probs=69.3
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEE
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 455 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l 455 (500)
++.||+++.+++|++.|+++.++|+........+-+..| +.++|. +. .|+-=.++.++++-. .+-+.
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elG---Id~v~A-------~~--~PedK~~iV~~lQ~~-G~~Va 511 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAG---VDDFLA-------EA--TPEDKLALIRQEQAE-GRLVA 511 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC---CcEEEc-------cC--CHHHHHHHHHHHHHc-CCeEE
Confidence 678999999999999999999999999999999999994 433321 12 344444555565554 56789
Q ss_pred EEeCCHhhHHHHHHcCCcEEEE
Q 010820 456 FVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 456 ~VGDs~~Di~aA~~aG~~~i~v 477 (500)
|+||+.||..+-+++.+....-
T Consensus 512 MtGDGvNDAPALa~ADVGIAMg 533 (679)
T PRK01122 512 MTGDGTNDAPALAQADVGVAMN 533 (679)
T ss_pred EECCCcchHHHHHhCCEeEEeC
Confidence 9999999999999998755443
No 195
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=96.49 E-value=0.0082 Score=55.75 Aligned_cols=85 Identities=14% Similarity=0.129 Sum_probs=58.2
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHH-H---HHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCC
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLA-Q---RLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVD 449 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~-~---~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~ 449 (500)
++.+.||+.++|+..-++|..+.-+||..++. . ..-|++. |+.......+-.....|++..-++.+-+ .
T Consensus 120 ~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~---g~~~~~~~~~llkk~~k~Ke~R~~~v~k----~ 192 (274)
T COG2503 120 KSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSE---GLPQVLESHLLLKKDKKSKEVRRQAVEK----D 192 (274)
T ss_pred ccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHc---CcccccccceEEeeCCCcHHHHHHHHhh----c
Confidence 45699999999999999999999999988776 2 3335555 3444432222112335677766666655 2
Q ss_pred CCCcEEEEeCCHhhHHH
Q 010820 450 KPSEILFVTDVYQEATA 466 (500)
Q Consensus 450 ~p~~~l~VGDs~~Di~a 466 (500)
-+-+++|||+..|...
T Consensus 193 -~~iVm~vGDNl~DF~d 208 (274)
T COG2503 193 -YKIVMLVGDNLDDFGD 208 (274)
T ss_pred -cceeeEecCchhhhcc
Confidence 4467899999977643
No 196
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=96.46 E-value=0.011 Score=55.70 Aligned_cols=40 Identities=13% Similarity=0.014 Sum_probs=36.6
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 010820 435 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 475 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i 475 (500)
++.....++++++++ ++++++|||+.||+.+.+.+|...+
T Consensus 180 Kg~al~~l~~~lgi~-~~~vi~~GD~~NDi~ml~~ag~~va 219 (221)
T TIGR02463 180 KGKAANWLKATYNQP-DVKTLGLGDGPNDLPLLEVADYAVV 219 (221)
T ss_pred HHHHHHHHHHHhCCC-CCcEEEECCCHHHHHHHHhCCceEE
Confidence 566789999999998 9999999999999999999998765
No 197
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=96.45 E-value=0.027 Score=49.61 Aligned_cols=100 Identities=12% Similarity=0.131 Sum_probs=57.8
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHH---HHHhccCcccccccccc--------cc----cccccCCC---CHHH
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQR---LIFGNSNYGDLRKYLSG--------FF----DTAVGNKR---ETPS 438 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~---~~l~~~~~~~l~~~f~~--------~~----d~~~~~KP---~p~~ 438 (500)
..+|+.++.+.+.++||++.-+|+.+..... ..|+...-++ ..+-.+ .+ .+....+| |..+
T Consensus 28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~-~~lP~Gpv~~sP~~l~~al~rEvi~~~p~~fK~~~ 106 (157)
T PF08235_consen 28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQG-HNLPDGPVLLSPDSLFSALHREVISKDPEEFKIAC 106 (157)
T ss_pred hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCC-ccCCCCCEEECCcchhhhhhccccccChHHHHHHH
Confidence 6689999999999999999999998854443 3343330000 011111 11 12222333 2333
Q ss_pred HHHHHHHcCCCCCCcE--EEEeCCHhhHHHHHHcCCcE--EEEcC
Q 010820 439 YVEITNSLGVDKPSEI--LFVTDVYQEATAAKAAGLEV--VISIR 479 (500)
Q Consensus 439 ~~~~l~~l~v~~p~~~--l~VGDs~~Di~aA~~aG~~~--i~v~~ 479 (500)
+..+...+.-. ..- .-+|++.+|+.+=+++|+.. |++..
T Consensus 107 L~~l~~~f~~~--~~pf~agfGN~~tDv~aY~~vGip~~rIF~I~ 149 (157)
T PF08235_consen 107 LRDLRALFPPD--GNPFYAGFGNRSTDVIAYKAVGIPKSRIFIIN 149 (157)
T ss_pred HHHHHHhcCCC--CCeEEEecCCcHHHHHHHHHcCCChhhEEEEC
Confidence 33333333311 222 33689999999999999987 55433
No 198
>PTZ00174 phosphomannomutase; Provisional
Probab=96.44 E-value=0.0068 Score=58.27 Aligned_cols=16 Identities=25% Similarity=0.505 Sum_probs=14.5
Q ss_pred CCCceEEEEecCCccc
Q 010820 281 GLFPRCIVLDIEGTTT 296 (500)
Q Consensus 281 ~~~~k~vlFD~DGTL~ 296 (500)
-|++|.|+||+||||+
T Consensus 2 ~~~~klia~DlDGTLL 17 (247)
T PTZ00174 2 EMKKTILLFDVDGTLT 17 (247)
T ss_pred CCCCeEEEEECcCCCc
Confidence 3668999999999999
No 199
>PRK10976 putative hydrolase; Provisional
Probab=96.35 E-value=0.0075 Score=58.55 Aligned_cols=43 Identities=14% Similarity=0.185 Sum_probs=33.9
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcC
Q 010820 436 TPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIR 479 (500)
Q Consensus 436 p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~ 479 (500)
...++.+++.+|++ +++++.|||+.||+++.+.+|...+.-+.
T Consensus 192 g~al~~l~~~lgi~-~~~viafGD~~NDi~Ml~~ag~~vAm~NA 234 (266)
T PRK10976 192 GHALEAVAKKLGYS-LKDCIAFGDGMNDAEMLSMAGKGCIMGNA 234 (266)
T ss_pred HHHHHHHHHHcCCC-HHHeEEEcCCcccHHHHHHcCCCeeecCC
Confidence 33556667777887 89999999999999999999987665543
No 200
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.32 E-value=0.0083 Score=58.19 Aligned_cols=34 Identities=15% Similarity=0.153 Sum_probs=29.3
Q ss_pred HHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccC
Q 010820 381 VPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN 414 (500)
Q Consensus 381 v~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~ 414 (500)
+.++|++|+++|++++++|+.....+..+.+.++
T Consensus 23 a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lg 56 (302)
T PRK12702 23 ARQALAALERRSIPLVLYSLRTRAQLEHLCRQLR 56 (302)
T ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhC
Confidence 4578899999999999999999888888888885
No 201
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=96.16 E-value=0.13 Score=55.82 Aligned_cols=46 Identities=4% Similarity=0.052 Sum_probs=39.9
Q ss_pred CCCCHHHHHHHHHHcCCCCCCcEEEE--eCCHhhHHHHHHcCCcEEEEc
Q 010820 432 NKRETPSYVEITNSLGVDKPSEILFV--TDVYQEATAAKAAGLEVVISI 478 (500)
Q Consensus 432 ~KP~p~~~~~~l~~l~v~~p~~~l~V--GDs~~Di~aA~~aG~~~i~v~ 478 (500)
.-.|....+.+++.++++ .++++.| ||+.||+.+-+.+|...+.-.
T Consensus 611 gvdKG~AL~~L~e~~gI~-~~eViafalGDs~NDisMLe~Ag~gVAM~~ 658 (694)
T PRK14502 611 GNDKGKAIKILNELFRLN-FGNIHTFGLGDSENDYSMLETVDSPILVQR 658 (694)
T ss_pred CCCHHHHHHHHHHHhCCC-ccceEEEEcCCcHhhHHHHHhCCceEEEcC
Confidence 456888999999999998 8888888 999999999999999766543
No 202
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=96.14 E-value=0.022 Score=48.41 Aligned_cols=31 Identities=26% Similarity=0.250 Sum_probs=26.0
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHH
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQR 407 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~ 407 (500)
+.+++.+.|++|+++|+.++++|+.+.....
T Consensus 25 ~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 25 PILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 6667889999999999999999998765544
No 203
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=96.14 E-value=0.016 Score=55.25 Aligned_cols=27 Identities=22% Similarity=0.319 Sum_probs=24.5
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcH
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSR 403 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~ 403 (500)
++|++.+.|+.|+++|+++.++||+..
T Consensus 15 ~~~~a~e~i~~l~~~g~~~~~~tN~~~ 41 (236)
T TIGR01460 15 PIPGAAEALNRLRAKGKPVVFLTNNSS 41 (236)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCC
Confidence 678999999999999999999998773
No 204
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=96.10 E-value=0.12 Score=48.44 Aligned_cols=44 Identities=20% Similarity=0.170 Sum_probs=39.6
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcC
Q 010820 435 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIR 479 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~ 479 (500)
+..+|++|.+++|-+ .-..++|||+..--.+|+..+|+++-|..
T Consensus 215 K~~cFe~I~~Rfg~p-~~~f~~IGDG~eEe~aAk~l~wPFw~I~~ 258 (274)
T TIGR01658 215 KLQCFKWIKERFGHP-KVRFCAIGDGWEECTAAQAMNWPFVKIDL 258 (274)
T ss_pred hHHHHHHHHHHhCCC-CceEEEeCCChhHHHHHHhcCCCeEEeec
Confidence 678999999999985 66778899999999999999999999875
No 205
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=95.96 E-value=0.013 Score=56.36 Aligned_cols=45 Identities=13% Similarity=0.189 Sum_probs=36.4
Q ss_pred CCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 434 RETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 434 P~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
-|......++++++++ +++++.+|||.||+.+- ..+...|.|...
T Consensus 165 ~K~~Al~~L~~~~~~~-~~~vl~aGDSgND~~mL-~~~~~~vvV~Na 209 (247)
T PF05116_consen 165 SKGAALRYLMERWGIP-PEQVLVAGDSGNDLEML-EGGDHGVVVGNA 209 (247)
T ss_dssp SHHHHHHHHHHHHT---GGGEEEEESSGGGHHHH-CCSSEEEE-TTS
T ss_pred CHHHHHHHHHHHhCCC-HHHEEEEeCCCCcHHHH-cCcCCEEEEcCC
Confidence 3778899999999998 99999999999999877 777788888653
No 206
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=95.96 E-value=0.018 Score=64.40 Aligned_cols=100 Identities=17% Similarity=0.111 Sum_probs=71.9
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccc----ccc-------------ccccc-cccccCCCCHH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDL----RKY-------------LSGFF-DTAVGNKRETP 437 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l----~~~-------------f~~~~-d~~~~~KP~p~ 437 (500)
++.|++.+++++|++.|+++.++|+........+.+.+|+.+- ..+ ++... +.....+-.|+
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe 521 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPE 521 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHH
Confidence 7889999999999999999999999999999999999965320 000 00111 00012233455
Q ss_pred HHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 438 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 438 ~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
-=.++.+.+.-. .+.+.|+||+.||..+-+.+.+....
T Consensus 522 ~K~~iV~~lq~~-G~~VamvGDGvNDapAL~~AdVGIAm 559 (755)
T TIGR01647 522 HKYEIVEILQKR-GHLVGMTGDGVNDAPALKKADVGIAV 559 (755)
T ss_pred HHHHHHHHHHhc-CCEEEEEcCCcccHHHHHhCCeeEEe
Confidence 555566666655 67899999999999999999877543
No 207
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=95.91 E-value=0.011 Score=57.51 Aligned_cols=102 Identities=11% Similarity=0.056 Sum_probs=73.1
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccc-------cccCCC--------CH-----
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT-------AVGNKR--------ET----- 436 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~-------~~~~KP--------~p----- 436 (500)
-.|....+|+.|+++|-++.++||++...+..-+..+-..++.++||-++-. ....+| ..
T Consensus 241 r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdk 320 (510)
T KOG2470|consen 241 RNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDK 320 (510)
T ss_pred ccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhh
Confidence 3456778999999999999999999999998887777656777777766510 011122 00
Q ss_pred ------------HHHHHHHHHcCCCCCCcEEEEeCCH-hhHHHHH-HcCCcEEEEcC
Q 010820 437 ------------PSYVEITNSLGVDKPSEILFVTDVY-QEATAAK-AAGLEVVISIR 479 (500)
Q Consensus 437 ------------~~~~~~l~~l~v~~p~~~l~VGDs~-~Di~aA~-~aG~~~i~v~~ 479 (500)
-.....++.-+.. ..+++|+||+. +|+..-. +.||.+-.+..
T Consensus 321 v~klekgkiYy~G~l~~flelt~Wr-G~~VlYFGDHlySDLad~tlkhgWRTgAII~ 376 (510)
T KOG2470|consen 321 VDKLEKGKIYYQGNLKSFLELTGWR-GPRVLYFGDHLYSDLADLTLKHGWRTGAIIP 376 (510)
T ss_pred hhhcccCceeeeccHHHHHHHhccC-CCeeEEecCcchhhhhhhHhhcccccccchH
Confidence 1223445555666 78999999998 8887766 89999976654
No 208
>PLN02382 probable sucrose-phosphatase
Probab=95.86 E-value=0.079 Score=54.89 Aligned_cols=47 Identities=15% Similarity=0.144 Sum_probs=39.6
Q ss_pred CCCCHHHHHHHHHHc---CCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcC
Q 010820 432 NKRETPSYVEITNSL---GVDKPSEILFVTDVYQEATAAKAAGLEVVISIR 479 (500)
Q Consensus 432 ~KP~p~~~~~~l~~l---~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~ 479 (500)
.--|...+..+++++ +++ +++++.+||+.||+++-+.+|...|.+..
T Consensus 173 g~sKg~Al~~L~~~~~~~gi~-~~~~iafGDs~NDleMl~~ag~~gvam~N 222 (413)
T PLN02382 173 GAGKGQALAYLLKKLKAEGKA-PVNTLVCGDSGNDAELFSVPDVYGVMVSN 222 (413)
T ss_pred CCCHHHHHHHHHHHhhhcCCC-hhcEEEEeCCHHHHHHHhcCCCCEEEEcC
Confidence 344788999999999 897 99999999999999999999965555543
No 209
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=95.86 E-value=0.032 Score=53.76 Aligned_cols=96 Identities=11% Similarity=0.031 Sum_probs=54.5
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEE
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILF 456 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~ 456 (500)
+.||+.++|+.|+..|-.+.++||++...-+...+++.-.|+. .+-+..+ .-|.-.+... +++.... .+.++.
T Consensus 39 ~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~----~v~e~~i-~ssa~~~a~y-lk~~~~~-~k~Vyv 111 (306)
T KOG2882|consen 39 PIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN----SVKEENI-FSSAYAIADY-LKKRKPF-GKKVYV 111 (306)
T ss_pred CCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc----ccCcccc-cChHHHHHHH-HHHhCcC-CCeEEE
Confidence 8899999999999999999999999876666555444111222 1111111 1222222222 2222222 567777
Q ss_pred EeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 457 VTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 457 VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
+|-..- -+..+++|+....-...
T Consensus 112 ig~~gi-~~eL~~aG~~~~g~~~~ 134 (306)
T KOG2882|consen 112 IGEEGI-REELDEAGFEYFGGGPD 134 (306)
T ss_pred ecchhh-hHHHHHcCceeecCCCC
Confidence 774431 12356677666655444
No 210
>PLN02887 hydrolase family protein
Probab=95.79 E-value=0.037 Score=59.55 Aligned_cols=36 Identities=33% Similarity=0.456 Sum_probs=29.5
Q ss_pred HHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEc
Q 010820 442 ITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISI 478 (500)
Q Consensus 442 ~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~ 478 (500)
+++.+|++ +++++.|||+.||+++-+.+|...+.-|
T Consensus 515 L~e~lGI~-~eeviAFGDs~NDIeMLe~AG~gVAMgN 550 (580)
T PLN02887 515 LLNHLGVS-PDEIMAIGDGENDIEMLQLASLGVALSN 550 (580)
T ss_pred HHHHcCCC-HHHEEEEecchhhHHHHHHCCCEEEeCC
Confidence 44566787 8899999999999999999998655544
No 211
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=95.62 E-value=0.028 Score=64.06 Aligned_cols=99 Identities=17% Similarity=0.163 Sum_probs=72.4
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccccc-------------ccc-cccccCCCCHHHHHH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS-------------GFF-DTAVGNKRETPSYVE 441 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~-------------~~~-d~~~~~KP~p~~~~~ 441 (500)
++.|++.+++++|++.|+++.++|+........+.+.+|+.+ ...+. ... +.....+-.|+-=.+
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~-~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~ 628 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA-GEVLIGSDIETLSDDELANLAERTTLFARLTPMHKER 628 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc-cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHH
Confidence 788999999999999999999999999999999999996531 00010 011 001122335555566
Q ss_pred HHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 442 ITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 442 ~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
+.+.+.-. .+-+.|+||+.||..+-+++.+....
T Consensus 629 IV~~Lq~~-G~vVam~GDGvNDaPALk~ADVGIAm 662 (902)
T PRK10517 629 IVTLLKRE-GHVVGFMGDGINDAPALRAADIGISV 662 (902)
T ss_pred HHHHHHHC-CCEEEEECCCcchHHHHHhCCEEEEe
Confidence 66666655 67899999999999999999876544
No 212
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=95.62 E-value=0.023 Score=53.76 Aligned_cols=35 Identities=29% Similarity=0.281 Sum_probs=28.3
Q ss_pred CHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccC
Q 010820 380 DVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN 414 (500)
Q Consensus 380 gv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~ 414 (500)
.+.++|++|+++|++++++|+.+...+...++.++
T Consensus 19 ~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg 53 (225)
T TIGR02461 19 PAREALEELKDLGFPIVFVSSKTRAEQEYYREELG 53 (225)
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcC
Confidence 35678888888899999999888888777777774
No 213
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=95.55 E-value=0.032 Score=63.44 Aligned_cols=100 Identities=13% Similarity=0.140 Sum_probs=71.2
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccccc-------------ccccc-cccCCCCHHHHHH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLS-------------GFFDT-AVGNKRETPSYVE 441 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~-------------~~~d~-~~~~KP~p~~~~~ 441 (500)
++.|++++++++|++.|+++.++|+........+-+.+|+.+ .+.+. ...+. .....-.|+-=.+
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~-~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~ 593 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA-NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSR 593 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC-CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHH
Confidence 788999999999999999999999999999999999996531 00110 00000 1112224444455
Q ss_pred HHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 010820 442 ITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 442 ~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v 477 (500)
+.+.+.-. .+.+.|+||+.||..+-+.+.+....-
T Consensus 594 iV~~lq~~-G~vVam~GDGvNDapALk~AdVGIAmg 628 (867)
T TIGR01524 594 IIGLLKKA-GHTVGFLGDGINDAPALRKADVGISVD 628 (867)
T ss_pred HHHHHHhC-CCEEEEECCCcccHHHHHhCCEEEEeC
Confidence 55555544 568999999999999999998876543
No 214
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=95.50 E-value=0.08 Score=50.69 Aligned_cols=82 Identities=18% Similarity=0.145 Sum_probs=59.6
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccccccccccc---c----------------cCCC---
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTA---V----------------GNKR--- 434 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~---~----------------~~KP--- 434 (500)
..|.+.+.|.+|+++|..+++=|.|.++++...++++ ++.++|+.++... + ..||
T Consensus 143 r~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~---~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~Fyl 219 (297)
T PF05152_consen 143 RDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKEL---KLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYL 219 (297)
T ss_pred CChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHh---CCccccEEEEeCCccCCcCCccceeecccceEEeccceEE
Confidence 3456778899999999989999999999999999999 5667777666110 0 0011
Q ss_pred ----------CHHHHHHHHHHcCCCCCCcEEEEeCCH
Q 010820 435 ----------ETPSYVEITNSLGVDKPSEILFVTDVY 461 (500)
Q Consensus 435 ----------~p~~~~~~l~~l~v~~p~~~l~VGDs~ 461 (500)
.|.+....+++.|+.--+.+-.|+|-.
T Consensus 220 Dv~~~~~LPKSPrVVL~yL~k~gvny~KtiTLVDDL~ 256 (297)
T PF05152_consen 220 DVTNVNNLPKSPRVVLWYLRKKGVNYFKTITLVDDLK 256 (297)
T ss_pred eCCcCCCCCCCCeehHHHHHHcCCceeeeEEEeccCc
Confidence 567777888888886456667788766
No 215
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=95.47 E-value=0.069 Score=53.45 Aligned_cols=85 Identities=15% Similarity=0.149 Sum_probs=52.0
Q ss_pred cCCCHHHHHHHHHhC----CcEEEEEcCCc---HHH-HHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCC
Q 010820 377 VFDDVPEALEKWHSL----GTKVYIYSSGS---RLA-QRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGV 448 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~----G~~l~v~Tn~~---~~~-~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v 448 (500)
++|++.++|+.|+.+ |.++.++||+. ... ...+.+++|+ .--.+.++.. .. .....++++
T Consensus 17 ~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~---~~~~~~i~~s------~~-~~~~ll~~~-- 84 (321)
T TIGR01456 17 PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGV---DVSPLQVIQS------HS-PYKSLVNKY-- 84 (321)
T ss_pred ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCC---CCCHHHHHhh------hH-HHHHHHHHc--
Confidence 577888999999998 99999999986 333 4444466642 1112222211 11 234444443
Q ss_pred CCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 449 DKPSEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 449 ~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
. ..+++||-+. -.+.++..|+..+.
T Consensus 85 ~--~~v~viG~~~-~~~~l~~~G~~~vv 109 (321)
T TIGR01456 85 E--KRILAVGTGS-VRGVAEGYGFQNVV 109 (321)
T ss_pred C--CceEEEeChH-HHHHHHHcCCcccc
Confidence 2 2678888654 46666788987654
No 216
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=95.46 E-value=0.028 Score=54.20 Aligned_cols=40 Identities=18% Similarity=0.360 Sum_probs=30.4
Q ss_pred HHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 010820 437 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 437 ~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v 477 (500)
..++.+++.++++ ++++++|||+.||+.+.+.+|+..+..
T Consensus 191 ~~i~~~~~~~~~~-~~~~~~~GD~~nD~~m~~~~~~~~a~~ 230 (256)
T TIGR00099 191 SALQSLAEALGIS-LEDVIAFGDGMNDIEMLEAAGYGVAMG 230 (256)
T ss_pred HHHHHHHHHcCCC-HHHEEEeCCcHHhHHHHHhCCceeEec
Confidence 3555566666666 788999999999999999999865553
No 217
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=95.31 E-value=0.023 Score=54.48 Aligned_cols=60 Identities=7% Similarity=-0.062 Sum_probs=47.7
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHc-------CCcEEEEcCCCCCCCCCCCCceeeCCccC
Q 010820 435 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAA-------GLEVVISIRPGNGPLPENHGFKTINSFAE 499 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~a-------G~~~i~v~~~~~~~~~~~~~~~~i~~l~e 499 (500)
|...+..++++++.. +++++||||+.+|+.+++.+ |..++.+..+.. ...+++++++..+
T Consensus 168 Kg~a~~~~~~~~~~~-~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~~----~~~A~~~~~~~~~ 234 (244)
T TIGR00685 168 KGEIVKRLLWHQPGS-GISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGSK----KTVAKFHLTGPQQ 234 (244)
T ss_pred HHHHHHHHHHhcccC-CCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCCc----CCCceEeCCCHHH
Confidence 468999999999998 99999999999999999998 777777764321 2224778877654
No 218
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=95.30 E-value=0.025 Score=52.44 Aligned_cols=48 Identities=19% Similarity=0.200 Sum_probs=42.4
Q ss_pred cccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 010820 427 DTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 475 (500)
Q Consensus 427 d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i 475 (500)
+......+|+..++.++++++++ ++++++|||+.+|+.+++.+|+..+
T Consensus 156 ev~p~~~~K~~~~~~~~~~~~~~-~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 156 EVLPAGVDKGSALQALLKELNGK-RDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred EEecCCCChHHHHHHHHHHhCCC-HHHEEEEcCCHHHHHHHHHcCCceE
Confidence 44455678999999999999998 9999999999999999999998754
No 219
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=95.28 E-value=0.048 Score=62.69 Aligned_cols=101 Identities=14% Similarity=0.060 Sum_probs=70.7
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccc------cc--------cccc-ccccCCCCHHHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY------LS--------GFFD-TAVGNKRETPSY 439 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~------f~--------~~~d-~~~~~KP~p~~~ 439 (500)
-++.|++.++++.|++.|+++.++|+........+-+..|+..-... |+ ...+ ......-.|+-=
T Consensus 578 Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K 657 (941)
T TIGR01517 578 DPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDK 657 (941)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHH
Confidence 37889999999999999999999999999999999999965310000 11 0110 011122244444
Q ss_pred HHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 440 VEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 440 ~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
.++.+.+.-. .+-+.|+||+.||..+-++|.+....
T Consensus 658 ~~iV~~lq~~-g~vVam~GDGvNDapALk~AdVGIAm 693 (941)
T TIGR01517 658 QLLVLMLKDM-GEVVAVTGDGTNDAPALKLADVGFSM 693 (941)
T ss_pred HHHHHHHHHC-CCEEEEECCCCchHHHHHhCCcceec
Confidence 5555555544 56799999999999999998776543
No 220
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=95.28 E-value=0.052 Score=61.91 Aligned_cols=98 Identities=12% Similarity=0.121 Sum_probs=71.7
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccc-----cc--------ccc-cccccCCCCHHHHHH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY-----LS--------GFF-DTAVGNKRETPSYVE 441 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~-----f~--------~~~-d~~~~~KP~p~~~~~ 441 (500)
++.|++.+++++|++.|+++.++|+........+-+.+|+.+ ... ++ ... +......-.|+-=.+
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~-~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~ 628 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP-GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSR 628 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC-CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHH
Confidence 788999999999999999999999999999999999996531 000 11 000 001122335555566
Q ss_pred HHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 010820 442 ITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 475 (500)
Q Consensus 442 ~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i 475 (500)
+.+.+.-. .+-+.|+||+.||..+-+.+.+...
T Consensus 629 iV~~Lq~~-G~vVamtGDGvNDaPALk~ADVGIA 661 (903)
T PRK15122 629 VLKALQAN-GHTVGFLGDGINDAPALRDADVGIS 661 (903)
T ss_pred HHHHHHhC-CCEEEEECCCchhHHHHHhCCEEEE
Confidence 66666655 6789999999999999999987644
No 221
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=95.20 E-value=0.34 Score=44.73 Aligned_cols=41 Identities=7% Similarity=-0.027 Sum_probs=34.3
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCc
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNY 415 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~ 415 (500)
..++.||+.++++.|.+. ++-+|+|.+...+.++..+..|+
T Consensus 81 sa~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~ 121 (315)
T COG4030 81 SAKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGV 121 (315)
T ss_pred hcccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCC
Confidence 367999999999999765 77888888899999988877754
No 222
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=95.13 E-value=0.038 Score=52.51 Aligned_cols=42 Identities=19% Similarity=0.338 Sum_probs=36.4
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEE
Q 010820 435 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v 477 (500)
|....+.+++.++++ +++++.|||+.||+.+.+.+|...+.-
T Consensus 187 K~~ai~~l~~~~~i~-~~~~~~~GD~~ND~~Ml~~~~~~~am~ 228 (254)
T PF08282_consen 187 KGSAIKYLLEYLGIS-PEDIIAFGDSENDIEMLELAGYSVAMG 228 (254)
T ss_dssp HHHHHHHHHHHHTTS-GGGEEEEESSGGGHHHHHHSSEEEEET
T ss_pred HHHHHHHHhhhcccc-cceeEEeecccccHhHHhhcCeEEEEc
Confidence 455888899999998 999999999999999999998875544
No 223
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=95.03 E-value=0.044 Score=51.55 Aligned_cols=34 Identities=12% Similarity=0.111 Sum_probs=30.3
Q ss_pred HHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccC
Q 010820 381 VPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN 414 (500)
Q Consensus 381 v~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~ 414 (500)
..++|+.|+++|++++++||++...+...++.++
T Consensus 21 ~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~ 54 (221)
T TIGR02463 21 AAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALG 54 (221)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcC
Confidence 4578999999999999999999999999998884
No 224
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=94.87 E-value=0.25 Score=45.44 Aligned_cols=37 Identities=14% Similarity=0.003 Sum_probs=33.7
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccC
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN 414 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~ 414 (500)
..|++.++|+.+.+ .|.++|-|.+...++..+++.++
T Consensus 46 kRP~l~eFL~~~~~-~feIvVwTAa~~~ya~~~l~~l~ 82 (195)
T TIGR02245 46 MRPYLHEFLTSAYE-DYDIVIWSATSMKWIEIKMTELG 82 (195)
T ss_pred eCCCHHHHHHHHHh-CCEEEEEecCCHHHHHHHHHHhc
Confidence 66999999999988 69999999999999999998774
No 225
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=94.74 E-value=0.09 Score=60.92 Aligned_cols=100 Identities=15% Similarity=0.143 Sum_probs=71.2
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccc----------c-cccc-----ccc---------cc
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLR----------K-YLSG-----FFD---------TA 429 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~----------~-~f~~-----~~d---------~~ 429 (500)
-++.|++.++++.|++.|+++.++|+........+.+..|+.+-. . .+++ ..+ ..
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~ 724 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCL 724 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCe
Confidence 378999999999999999999999999999999999999653110 0 0000 000 00
Q ss_pred ccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 010820 430 VGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVV 475 (500)
Q Consensus 430 ~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i 475 (500)
....-.|+-=.++.+.+.-. .+.+.|+||+.||..+-+.+.+...
T Consensus 725 V~ar~sP~~K~~iV~~lq~~-g~~Vam~GDGvNDapaLk~AdVGIA 769 (1053)
T TIGR01523 725 VIARCAPQTKVKMIEALHRR-KAFCAMTGDGVNDSPSLKMANVGIA 769 (1053)
T ss_pred EEEecCHHHHHHHHHHHHhc-CCeeEEeCCCcchHHHHHhCCccEe
Confidence 11223455445566666544 5678999999999999999987665
No 226
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=94.59 E-value=0.081 Score=51.11 Aligned_cols=105 Identities=16% Similarity=0.184 Sum_probs=62.0
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCc-ccccccccccccc-------cccCCC-------CHHHHH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNY-GDLRKYLSGFFDT-------AVGNKR-------ETPSYV 440 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~-~~l~~~f~~~~d~-------~~~~KP-------~p~~~~ 440 (500)
.++||+.++|+.|+++|.++.++||++...-+...+++.- ++...-.+.++.+ ....+| -.+.+.
T Consensus 24 ~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~~at~~~l~~~~~~~kv~viG~~~l~ 103 (269)
T COG0647 24 EAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSGDATADYLAKQKPGKKVYVIGEEGLK 103 (269)
T ss_pred ccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHHHHHHHHHHhhCCCCEEEEECCcchH
Confidence 3999999999999999999999999886554433333311 1332334444411 112222 345666
Q ss_pred HHHHHcCCC----CCC---cEEEEeCCH----hh---HHHHHHcCCcEEEEcCC
Q 010820 441 EITNSLGVD----KPS---EILFVTDVY----QE---ATAAKAAGLEVVISIRP 480 (500)
Q Consensus 441 ~~l~~l~v~----~p~---~~l~VGDs~----~D---i~aA~~aG~~~i~v~~~ 480 (500)
..++.+|+. +.. .++.+|... .+ ..-+.+.|+.+|.-|.+
T Consensus 104 ~~l~~~G~~~~~~~~~~~~d~Vv~g~d~~~~~e~l~~a~~~i~~g~~fI~tNpD 157 (269)
T COG0647 104 EELEGAGFELVDEEEPARVDAVVVGLDRTLTYEKLAEALLAIAAGAPFIATNPD 157 (269)
T ss_pred HHHHhCCcEEeccCCCCcccEEEEecCCCCCHHHHHHHHHHHHcCCcEEEeCCC
Confidence 777777752 012 467777443 23 23344467777777755
No 227
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=94.59 E-value=0.21 Score=52.76 Aligned_cols=88 Identities=11% Similarity=0.078 Sum_probs=50.7
Q ss_pred HHHHHHhCCcEEEEEcCCcHHHHHHHHhc-cCccccccc-----ccccccccccCC-C--CHHHHHHHHHHcCCCCCCcE
Q 010820 384 ALEKWHSLGTKVYIYSSGSRLAQRLIFGN-SNYGDLRKY-----LSGFFDTAVGNK-R--ETPSYVEITNSLGVDKPSEI 454 (500)
Q Consensus 384 ~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~-~~~~~l~~~-----f~~~~d~~~~~K-P--~p~~~~~~l~~l~v~~p~~~ 454 (500)
.++.++++|.. +|+|...+...+.+.+. +|+..+-.- .++.+....... + ...-..++.+.++.+ ...
T Consensus 115 a~~~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~g~~-~~~- 191 (497)
T PLN02177 115 TWRVFNSFGKR-YIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVLKEFGDA-LPD- 191 (497)
T ss_pred HHHHHHhCCCE-EEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecCCCCCccHHHHHHHHHHhCCC-Cce-
Confidence 44455677864 99999999999999965 654322110 133331111111 1 111223333556643 333
Q ss_pred EEEeCCHhhHHHHHHcCCcE
Q 010820 455 LFVTDVYQEATAAKAAGLEV 474 (500)
Q Consensus 455 l~VGDs~~Di~aA~~aG~~~ 474 (500)
+..||+.+|...-..++-..
T Consensus 192 ~aYgDS~sD~plL~~a~e~y 211 (497)
T PLN02177 192 LGLGDRETDHDFMSICKEGY 211 (497)
T ss_pred EEEECCccHHHHHHhCCccE
Confidence 88999999999888877543
No 228
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=94.49 E-value=0.13 Score=56.69 Aligned_cols=87 Identities=20% Similarity=0.256 Sum_probs=65.3
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCC--CHHHHHHHHHHcCCCCCCc
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKR--ETPSYVEITNSLGVDKPSE 453 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP--~p~~~~~~l~~l~v~~p~~ 453 (500)
++.|++..++..||+.|++++++|+.+....+..-+.. | ++.++.. -+| +.+.++++. -. ...
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~V---G----i~~V~ae---v~P~~K~~~Ik~lq----~~-~~~ 787 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQV---G----IDNVYAE---VLPEQKAEKIKEIQ----KN-GGP 787 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhh---C----cceEEec---cCchhhHHHHHHHH----hc-CCc
Confidence 67899999999999999999999999999999999888 3 3444411 355 444544443 33 567
Q ss_pred EEEEeCCHhhHHHHHHcCCcEEEE
Q 010820 454 ILFVTDVYQEATAAKAAGLEVVIS 477 (500)
Q Consensus 454 ~l~VGDs~~Di~aA~~aG~~~i~v 477 (500)
+.||||+.||--+-..+.+.....
T Consensus 788 VaMVGDGINDaPALA~AdVGIaig 811 (951)
T KOG0207|consen 788 VAMVGDGINDAPALAQADVGIAIG 811 (951)
T ss_pred EEEEeCCCCccHHHHhhccceeec
Confidence 899999999987777666544433
No 229
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=94.42 E-value=0.11 Score=59.57 Aligned_cols=103 Identities=19% Similarity=0.188 Sum_probs=76.3
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccc---ccccc-----cc---------ccccCCCCHH
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK---YLSGF-----FD---------TAVGNKRETP 437 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~---~f~~~-----~d---------~~~~~KP~p~ 437 (500)
-+|.++++++++.|++.|+++.++|+........+-+..|+..-.. .+++. .+ ....++-.|+
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~ 625 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPE 625 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHH
Confidence 4899999999999999999999999999999999999997432211 11111 11 0122233566
Q ss_pred HHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEc
Q 010820 438 SYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISI 478 (500)
Q Consensus 438 ~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~ 478 (500)
-=.++.+.+.-. .+-+.|.||+.||+-+-+.|.+......
T Consensus 626 qK~~IV~~lq~~-g~vVamtGDGvNDapALk~ADVGIamg~ 665 (917)
T COG0474 626 QKARIVEALQKS-GHVVAMTGDGVNDAPALKAADVGIAMGG 665 (917)
T ss_pred HHHHHHHHHHhC-CCEEEEeCCCchhHHHHHhcCccEEecc
Confidence 666666666665 6789999999999999999988775554
No 230
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=94.21 E-value=0.19 Score=53.53 Aligned_cols=82 Identities=17% Similarity=0.253 Sum_probs=64.9
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEE
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 455 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l 455 (500)
++.|++.++++.|++.|+++.++|+........+-+.+| + + ..-.|+--..+.+++.-. ...+.
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lg---i-------~-----~~~~p~~K~~~v~~l~~~-g~~v~ 410 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELG---I-------F-----ARVTPEEKAALVEALQKK-GRVVA 410 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcC---c-------e-----eccCHHHHHHHHHHHHHC-CCEEE
Confidence 788999999999999999999999999999999988884 2 1 112344444555555443 56899
Q ss_pred EEeCCHhhHHHHHHcCCc
Q 010820 456 FVTDVYQEATAAKAAGLE 473 (500)
Q Consensus 456 ~VGDs~~Di~aA~~aG~~ 473 (500)
||||..||..+-+.+++.
T Consensus 411 ~vGDg~nD~~al~~Advg 428 (499)
T TIGR01494 411 MTGDGVNDAPALKKADVG 428 (499)
T ss_pred EECCChhhHHHHHhCCCc
Confidence 999999999999988765
No 231
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=94.19 E-value=0.096 Score=50.53 Aligned_cols=44 Identities=9% Similarity=0.050 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHcCCCC--CCcEEEEeCCHhhHHHHHHcCCcEEEEcC
Q 010820 435 ETPSYVEITNSLGVDK--PSEILFVTDVYQEATAAKAAGLEVVISIR 479 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~--p~~~l~VGDs~~Di~aA~~aG~~~i~v~~ 479 (500)
+......+++.+++ + .+++++|||+.||+.+.+.+|...+.-+.
T Consensus 177 Kg~ai~~l~~~~~i-~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na 222 (256)
T TIGR01486 177 KGKAANALKQFYNQ-PGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGP 222 (256)
T ss_pred HHHHHHHHHHHHhh-cCCCceEEEEcCCHhhHHHHHHCCEEEEeCCC
Confidence 44455666777765 3 78899999999999999999988777664
No 232
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=94.16 E-value=0.085 Score=48.85 Aligned_cols=35 Identities=23% Similarity=0.272 Sum_probs=30.1
Q ss_pred CCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhcc
Q 010820 379 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 413 (500)
Q Consensus 379 pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~ 413 (500)
+.+.+.|++|+++|.+++++|+.....+..+++.+
T Consensus 20 ~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~ 54 (204)
T TIGR01484 20 PETIEALERLREAGVKVVLVTGRSLAEIKELLKQL 54 (204)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhC
Confidence 44668999999999999999999999988888764
No 233
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=93.76 E-value=0.14 Score=59.27 Aligned_cols=101 Identities=17% Similarity=0.170 Sum_probs=70.9
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccc-------------------------cccc-----
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-------------------------YLSG----- 424 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~-------------------------~f~~----- 424 (500)
-++.|++++++++|+++|+++.++|+........+.+.+|+..-.. .+++
T Consensus 567 Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~ 646 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD 646 (997)
T ss_pred CCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh
Confidence 3789999999999999999999999999999999998886521000 0000
Q ss_pred --------cccc---cccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 425 --------FFDT---AVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 425 --------~~d~---~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
.... ....+-.|+--.++.+.+.-. ..-+.|+||+.||+.+-+.+.+....
T Consensus 647 l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~-g~vv~~~GDG~ND~paLk~AdVGiam 708 (997)
T TIGR01106 647 MTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAM 708 (997)
T ss_pred CCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHhhCCcceec
Confidence 0000 012233455555555555544 56789999999999999998876554
No 234
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=93.43 E-value=0.3 Score=56.96 Aligned_cols=41 Identities=7% Similarity=0.127 Sum_probs=38.2
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCc
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNY 415 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~ 415 (500)
-++.|++.++++.|++.|+++.++|+........+-+..|+
T Consensus 655 d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gi 695 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGI 695 (1054)
T ss_pred cCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC
Confidence 37889999999999999999999999999999999888865
No 235
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=93.40 E-value=0.11 Score=50.12 Aligned_cols=14 Identities=21% Similarity=0.377 Sum_probs=9.1
Q ss_pred EEEEeCCCCcccCC
Q 010820 87 MYVLSGNGTTLSSP 100 (500)
Q Consensus 87 i~~vd~~g~~~~g~ 100 (500)
++..|+||..+...
T Consensus 1 li~~DlDGTLl~~~ 14 (256)
T TIGR00099 1 LIFIDLDGTLLNDD 14 (256)
T ss_pred CEEEeCCCCCCCCC
Confidence 35677787777543
No 236
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=93.23 E-value=0.17 Score=49.09 Aligned_cols=42 Identities=12% Similarity=0.057 Sum_probs=33.5
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHc---CCcEEEE
Q 010820 435 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAA---GLEVVIS 477 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~a---G~~~i~v 477 (500)
|.....++++.+++. .++++++||+.+|+.+-+.+ +..+|.|
T Consensus 175 Kg~al~~ll~~~~~~-~~~v~~~GD~~nD~~mf~~~~~~~g~~vav 219 (266)
T PRK10187 175 KGEAIAAFMQEAPFA-GRTPVFVGDDLTDEAGFAVVNRLGGISVKV 219 (266)
T ss_pred HHHHHHHHHHhcCCC-CCeEEEEcCCccHHHHHHHHHhcCCeEEEE
Confidence 566777788888887 88999999999999998877 3444555
No 237
>PRK10976 putative hydrolase; Provisional
Probab=92.88 E-value=0.1 Score=50.53 Aligned_cols=12 Identities=25% Similarity=0.537 Sum_probs=5.7
Q ss_pred eEEEEecCCccc
Q 010820 285 RCIVLDIEGTTT 296 (500)
Q Consensus 285 k~vlFD~DGTL~ 296 (500)
|+|+||+||||+
T Consensus 3 kli~~DlDGTLl 14 (266)
T PRK10976 3 QVVASDLDGTLL 14 (266)
T ss_pred eEEEEeCCCCCc
Confidence 444444444444
No 238
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=92.58 E-value=0.39 Score=52.52 Aligned_cols=100 Identities=16% Similarity=0.170 Sum_probs=73.6
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccc----------ccccccc-c--------ccCCCCH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY----------LSGFFDT-A--------VGNKRET 436 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~----------f~~~~d~-~--------~~~KP~p 436 (500)
+|.|++.+.++.+++.|+++.++|+........+.++.|+.+-.+- ||..-+. . ....-.|
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P 663 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEP 663 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCc
Confidence 8999999999999999999999999999999999999965433221 2222211 0 0112255
Q ss_pred HHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 437 PSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 437 ~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
.--.++.+.|.-. .+=+.|-||+.||--+-+.+.+....
T Consensus 664 ~HK~kIVeaLq~~-geivAMTGDGVNDApALK~AdIGIAM 702 (972)
T KOG0202|consen 664 QHKLKIVEALQSR-GEVVAMTGDGVNDAPALKKADIGIAM 702 (972)
T ss_pred hhHHHHHHHHHhc-CCEEEecCCCccchhhhhhcccceee
Confidence 5566777777765 67889999999999998888765433
No 239
>PLN02423 phosphomannomutase
Probab=92.54 E-value=0.25 Score=47.36 Aligned_cols=30 Identities=17% Similarity=0.029 Sum_probs=25.2
Q ss_pred CCcEEEEeC----CHhhHHHHHHcCCcEEEEcCC
Q 010820 451 PSEILFVTD----VYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 451 p~~~l~VGD----s~~Di~aA~~aG~~~i~v~~~ 480 (500)
+++++.+|| +.||+++-+.-|+.++-|..+
T Consensus 200 ~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~ 233 (245)
T PLN02423 200 FDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSP 233 (245)
T ss_pred cCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCH
Confidence 678999999 689999988888888888654
No 240
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=92.40 E-value=0.48 Score=43.66 Aligned_cols=35 Identities=17% Similarity=0.134 Sum_probs=29.4
Q ss_pred HHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcc
Q 010820 382 PEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYG 416 (500)
Q Consensus 382 ~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~ 416 (500)
.+.+.+|++.|+++..+|+.++..+...-+.++..
T Consensus 29 ~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 29 APVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred chHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 36788899999999999999999988888888543
No 241
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=92.29 E-value=0.088 Score=46.71 Aligned_cols=82 Identities=21% Similarity=0.224 Sum_probs=53.1
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccc-cccccccc--cccccCCCCHHHHHHHHHHcCCCCC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDL-RKYLSGFF--DTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l-~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
..+.||+.++|+.|.+. +.++|.|.+.+.+...+++.+. - ..+|...+ +.... ... .+.+-+++++-+ .
T Consensus 35 v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ld---p~~~~~~~~~~r~~~~~-~~~--~~~KdL~~l~~~-~ 106 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALD---PNGKLFSRRLYRDDCTF-DKG--SYIKDLSKLGRD-L 106 (159)
T ss_dssp EEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHT---TTTSSEEEEEEGGGSEE-ETT--EEE--GGGSSS--G
T ss_pred EeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhh---hhccccccccccccccc-ccc--ccccchHHHhhc-c
Confidence 35789999999999664 9999999999999999998883 2 23465555 11111 111 112566677765 8
Q ss_pred CcEEEEeCCHhhH
Q 010820 452 SEILFVTDVYQEA 464 (500)
Q Consensus 452 ~~~l~VGDs~~Di 464 (500)
+++++|+|++.-.
T Consensus 107 ~~vvivDD~~~~~ 119 (159)
T PF03031_consen 107 DNVVIVDDSPRKW 119 (159)
T ss_dssp GGEEEEES-GGGG
T ss_pred ccEEEEeCCHHHe
Confidence 9999999998643
No 242
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=91.68 E-value=0.42 Score=47.72 Aligned_cols=98 Identities=16% Similarity=0.194 Sum_probs=58.8
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcH--------HHHHHHHhccCcc-ccc-ccccccccccccCCCCHHHHHHHHHHc
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSR--------LAQRLIFGNSNYG-DLR-KYLSGFFDTAVGNKRETPSYVEITNSL 446 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~--------~~~~~~l~~~~~~-~l~-~~f~~~~d~~~~~KP~p~~~~~~l~~l 446 (500)
++|.+..=|+.|.+.|+.+++.||... .....+++++-.. ++. .++... .....+||..-|++...+..
T Consensus 105 l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~anl~vPi~~~~A~-~~~~yRKP~tGMwe~~~~~~ 183 (422)
T KOG2134|consen 105 LFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVANLGVPIQLLAAI-IKGKYRKPSTGMWEFLKRLE 183 (422)
T ss_pred eccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHhcCCceEEeeec-cCCcccCcchhHHHHHHHHh
Confidence 667777788888888999999888431 1222222222000 110 001111 11345799999999988777
Q ss_pred CCC-C--CCcEEEEeCC---------------HhhHHHHHHcCCcEE
Q 010820 447 GVD-K--PSEILFVTDV---------------YQEATAAKAAGLEVV 475 (500)
Q Consensus 447 ~v~-~--p~~~l~VGDs---------------~~Di~aA~~aG~~~i 475 (500)
+-. + -+.+.||||. ..|+.-|.++|+.+.
T Consensus 184 nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvkF~ 230 (422)
T KOG2134|consen 184 NDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVKFK 230 (422)
T ss_pred hccceeeechhhhhhhhccCccccccCcccccHHHHHHHHhcCCccC
Confidence 532 1 4455688773 368999999998764
No 243
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=91.12 E-value=0.63 Score=48.22 Aligned_cols=85 Identities=13% Similarity=0.194 Sum_probs=65.0
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEE
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEIL 455 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l 455 (500)
...||.+|.+.+||+.|++...||+.++-....+-+.. |+++|+. ..||. --....++.+-+ .+=+.
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EA---GVDdfiA-------eatPE--dK~~~I~~eQ~~-grlVA 513 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEA---GVDDFIA-------EATPE--DKLALIRQEQAE-GRLVA 513 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHh---Cchhhhh-------cCChH--HHHHHHHHHHhc-CcEEE
Confidence 47799999999999999999999999999999888888 4444431 24553 334556666665 77889
Q ss_pred EEeCCHhhHHHHHHcCCc
Q 010820 456 FVTDVYQEATAAKAAGLE 473 (500)
Q Consensus 456 ~VGDs~~Di~aA~~aG~~ 473 (500)
|.||..||.-+-..+...
T Consensus 514 MtGDGTNDAPALAqAdVg 531 (681)
T COG2216 514 MTGDGTNDAPALAQADVG 531 (681)
T ss_pred EcCCCCCcchhhhhcchh
Confidence 999999998776666543
No 244
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=90.55 E-value=0.69 Score=47.11 Aligned_cols=99 Identities=12% Similarity=0.083 Sum_probs=75.3
Q ss_pred cccCC--CHHHHHHHHHhCCcEEEEEcCCc--HHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCC
Q 010820 375 GEVFD--DVPEALEKWHSLGTKVYIYSSGS--RLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGV 448 (500)
Q Consensus 375 ~~~~p--gv~~~L~~L~~~G~~l~v~Tn~~--~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v 448 (500)
..++| ...++.+.+.+.|.++.++|... .+..+.+|-..|. .-.-..++ ......|-..+.|..+++.-++
T Consensus 96 evLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~---d~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnV 172 (635)
T COG5610 96 EVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGP---DFNNIPIYMSSEFRLKKNSGNLFKAVLKLENV 172 (635)
T ss_pred eEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCC---CccCceeeecceeehhcccchHHHHHHhhcCC
Confidence 34554 45789999999999999999954 5666777766632 11111112 2234468889999999999999
Q ss_pred CCCCcEEEEeCCH-hhHHHHHHcCCcEEEE
Q 010820 449 DKPSEILFVTDVY-QEATAAKAAGLEVVIS 477 (500)
Q Consensus 449 ~~p~~~l~VGDs~-~Di~aA~~aG~~~i~v 477 (500)
+ |...+++||+. .|+..+++.|+.|.+.
T Consensus 173 d-~~~w~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 173 D-PKKWIHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred C-hhheEEecCchhhhhcCccccchhHHHH
Confidence 9 99999999998 8999999999999766
No 245
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=89.69 E-value=0.89 Score=43.76 Aligned_cols=9 Identities=33% Similarity=0.331 Sum_probs=3.8
Q ss_pred EEeCCCCcc
Q 010820 89 VLSGNGTTL 97 (500)
Q Consensus 89 ~vd~~g~~~ 97 (500)
.+|+||..+
T Consensus 3 ~~DlDGTll 11 (256)
T TIGR01486 3 FTDLDGTLL 11 (256)
T ss_pred EEcCCCCCc
Confidence 344444443
No 246
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=89.68 E-value=0.4 Score=45.35 Aligned_cols=21 Identities=19% Similarity=0.400 Sum_probs=15.9
Q ss_pred CHHHHHHHHHhCCcEEEEEcC
Q 010820 380 DVPEALEKWHSLGTKVYIYSS 400 (500)
Q Consensus 380 gv~~~L~~L~~~G~~l~v~Tn 400 (500)
-+.++++.++++++.+.+.|+
T Consensus 83 ~~~~i~~~~~~~~~~~~~~~~ 103 (254)
T PF08282_consen 83 DVKKILKYLKEHNISFFFYTD 103 (254)
T ss_dssp HHHHHHHHHHHTTCEEEEEES
T ss_pred chhheeehhhhcccccccccc
Confidence 356788888888887777764
No 247
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=89.57 E-value=0.52 Score=44.56 Aligned_cols=40 Identities=8% Similarity=0.046 Sum_probs=32.5
Q ss_pred CHHHHHHHHHHcCC--CCCCcEEEEeCCHhhHHHHHHcCCcEE
Q 010820 435 ETPSYVEITNSLGV--DKPSEILFVTDVYQEATAAKAAGLEVV 475 (500)
Q Consensus 435 ~p~~~~~~l~~l~v--~~p~~~l~VGDs~~Di~aA~~aG~~~i 475 (500)
++.....+++.+++ + +.++++|||+.||+.+.+.+|+..+
T Consensus 182 K~~al~~l~~~~~~~~~-~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 182 KGKAIKRLLDLYKLRPG-AIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred HHHHHHHHHHHhccccC-cccEEEEcCCHHHHHHHHhCCCcEe
Confidence 45566677777755 5 7799999999999999999999764
No 248
>PLN03017 trehalose-phosphatase
Probab=89.42 E-value=0.66 Score=46.86 Aligned_cols=43 Identities=9% Similarity=-0.001 Sum_probs=25.2
Q ss_pred cEEEEeCCHhhHHHHHHcC----CcEEEEcCCCCCCCCCCCCceeeCCccC
Q 010820 453 EILFVTDVYQEATAAKAAG----LEVVISIRPGNGPLPENHGFKTINSFAE 499 (500)
Q Consensus 453 ~~l~VGDs~~Di~aA~~aG----~~~i~v~~~~~~~~~~~~~~~~i~~l~e 499 (500)
-.+||||...|-.+.+.+. .-.|.|... .. ...+.|.+++..|
T Consensus 304 ~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~-~k---~T~A~y~L~dp~e 350 (366)
T PLN03017 304 FPVYIGDDRTDEDAFKMLRDRGEGFGILVSKF-PK---DTDASYSLQDPSE 350 (366)
T ss_pred eEEEeCCCCccHHHHHHHhhcCCceEEEECCC-CC---CCcceEeCCCHHH
Confidence 3699999998877777652 234555321 11 1223677777654
No 249
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=89.24 E-value=2.9 Score=43.78 Aligned_cols=91 Identities=11% Similarity=-0.011 Sum_probs=51.1
Q ss_pred HHHHHHhCCcEEEEEcCCcHHHHHHHHhc-cCcccccc----cc-cccccccccCCCCHHH-HHHHHHHcCCCCCCcEEE
Q 010820 384 ALEKWHSLGTKVYIYSSGSRLAQRLIFGN-SNYGDLRK----YL-SGFFDTAVGNKRETPS-YVEITNSLGVDKPSEILF 456 (500)
Q Consensus 384 ~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~-~~~~~l~~----~f-~~~~d~~~~~KP~p~~-~~~~l~~l~v~~p~~~l~ 456 (500)
.++..+..| +++|+|..++...+..++. +|.+.+-. .. .+++......+.-.+. ..++.+.++- ....+=
T Consensus 101 ~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D~VvGTEL~v~~~G~~TG~~~G~n~~ek~~~rl~~~~g~--~~~~vg 177 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRADEVIGSELVVNRFGFATGFIRGTDVDQSVANRVANLFVD--ERPQLG 177 (498)
T ss_pred HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCceEEeeeEEEeeccEEEEEEecCccHHHHHHHHHHHhCc--cCceec
Confidence 667777778 9999999999999999998 65332200 01 1333111112222333 3344444653 344666
Q ss_pred EeCCHhhHHHHHHcCCcEEEEcC
Q 010820 457 VTDVYQEATAAKAAGLEVVISIR 479 (500)
Q Consensus 457 VGDs~~Di~aA~~aG~~~i~v~~ 479 (500)
+||+..|-.-..- ++.+.+..
T Consensus 178 ~~~~~~~~~f~~~--ck~~~~~~ 198 (498)
T PLN02499 178 LGRISASSSFLSL--CKEQIHPP 198 (498)
T ss_pred ccCCcccchhhhh--CceEEecC
Confidence 7787755544433 44555543
No 250
>PLN02887 hydrolase family protein
Probab=89.09 E-value=0.49 Score=51.07 Aligned_cols=18 Identities=22% Similarity=0.097 Sum_probs=15.7
Q ss_pred CCCceEEEEecCCccccc
Q 010820 281 GLFPRCIVLDIEGTTTPI 298 (500)
Q Consensus 281 ~~~~k~vlFD~DGTL~~~ 298 (500)
.+++|+|+||+||||++.
T Consensus 305 ~~~iKLIa~DLDGTLLn~ 322 (580)
T PLN02887 305 KPKFSYIFCDMDGTLLNS 322 (580)
T ss_pred ccCccEEEEeCCCCCCCC
Confidence 457999999999999954
No 251
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=88.90 E-value=1.1 Score=52.47 Aligned_cols=40 Identities=18% Similarity=0.248 Sum_probs=35.9
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCc
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNY 415 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~ 415 (500)
++.||+.++++.|++.|+++.++|+........+-...++
T Consensus 631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~i 670 (1057)
T TIGR01652 631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRL 670 (1057)
T ss_pred hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCC
Confidence 7899999999999999999999999999888888666653
No 252
>PLN02580 trehalose-phosphatase
Probab=88.50 E-value=0.75 Score=46.84 Aligned_cols=35 Identities=20% Similarity=0.096 Sum_probs=27.4
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhc
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN 412 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~ 412 (500)
+-|++.++|+.|.+. .+++|+|+.....+...+.-
T Consensus 142 ~s~~~~~aL~~La~~-~~VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 142 MSDAMRSAVKNVAKY-FPTAIISGRSRDKVYELVGL 176 (384)
T ss_pred CCHHHHHHHHHHhhC-CCEEEEeCCCHHHHHHHhCC
Confidence 556778888888877 57999999888888777653
No 253
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=88.17 E-value=2.6 Score=40.41 Aligned_cols=101 Identities=9% Similarity=0.029 Sum_probs=60.4
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCc---HHHHHHHHhccCcccccccccccccc-------cccCCC-------CHHHH
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGS---RLAQRLIFGNSNYGDLRKYLSGFFDT-------AVGNKR-------ETPSY 439 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~---~~~~~~~l~~~~~~~l~~~f~~~~d~-------~~~~KP-------~p~~~ 439 (500)
++|++.++|++|+++|.+++++||++ .......++.+|+ ....+.++.. ....++ -.+.+
T Consensus 18 ~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~---~~~~~~iit~~~~~~~~l~~~~~~~~v~~lg~~~l 94 (249)
T TIGR01457 18 RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDI---PATLETVFTASMATADYMNDLKLEKTVYVIGEEGL 94 (249)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC---CCChhhEeeHHHHHHHHHHhcCCCCEEEEEcChhH
Confidence 67789999999999999999999844 6667777877754 2222223210 011111 12345
Q ss_pred HHHHHHcCCC---CCCcEEEEeCC-H---hhHHHHH---HcCCcEEEEcCC
Q 010820 440 VEITNSLGVD---KPSEILFVTDV-Y---QEATAAK---AAGLEVVISIRP 480 (500)
Q Consensus 440 ~~~l~~l~v~---~p~~~l~VGDs-~---~Di~aA~---~aG~~~i~v~~~ 480 (500)
...++..|+. +..+.++||.. . .++..|. +.|+..+..+.+
T Consensus 95 ~~~l~~~g~~~~~~~~~~Vvvg~~~~~~y~~l~~a~~~l~~g~~~i~tN~D 145 (249)
T TIGR01457 95 KEAIKEAGYVEDKEKPDYVVVGLDRQIDYEKFATATLAIRKGAHFIGTNGD 145 (249)
T ss_pred HHHHHHcCCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCeEEEECCC
Confidence 6677776743 12356777743 2 3443332 458887776654
No 254
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=87.82 E-value=1.3 Score=50.24 Aligned_cols=36 Identities=11% Similarity=0.092 Sum_probs=27.8
Q ss_pred CHHHHHHHHH---HcCCCCCCcEEEEeCCHhhHHHHHHcC
Q 010820 435 ETPSYVEITN---SLGVDKPSEILFVTDVYQEATAAKAAG 471 (500)
Q Consensus 435 ~p~~~~~~l~---~l~v~~p~~~l~VGDs~~Di~aA~~aG 471 (500)
|......+++ .++.. ++.+++|||..+|..+-+.++
T Consensus 763 KG~Al~~Ll~~~~~~g~~-~d~vl~~GDD~nDedMF~~~~ 801 (854)
T PLN02205 763 KGLVAKRLLSIMQERGML-PDFVLCIGDDRSDEDMFEVIT 801 (854)
T ss_pred HHHHHHHHHHHHHhcCCC-cccEEEEcCCccHHHHHHHhh
Confidence 4445555653 35777 899999999999999988876
No 255
>PLN02151 trehalose-phosphatase
Probab=87.70 E-value=0.9 Score=45.71 Aligned_cols=42 Identities=12% Similarity=0.066 Sum_probs=24.1
Q ss_pred EEEEeCCHhhHHHHHHcC----CcEEEEcCCCCCCCCCCCCceeeCCccC
Q 010820 454 ILFVTDVYQEATAAKAAG----LEVVISIRPGNGPLPENHGFKTINSFAE 499 (500)
Q Consensus 454 ~l~VGDs~~Di~aA~~aG----~~~i~v~~~~~~~~~~~~~~~~i~~l~e 499 (500)
.+||||...|-.+.+.+. --.|.|..+. ....+.|.+++..|
T Consensus 291 pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~----k~T~A~y~L~dp~e 336 (354)
T PLN02151 291 PIYIGDDRTDEDAFKILRDKKQGLGILVSKYA----KETNASYSLQEPDE 336 (354)
T ss_pred EEEEcCCCcHHHHHHHHhhcCCCccEEeccCC----CCCcceEeCCCHHH
Confidence 699999998877766542 1234443211 12234677777654
No 256
>PLN03190 aminophospholipid translocase; Provisional
Probab=85.57 E-value=1.4 Score=51.65 Aligned_cols=36 Identities=25% Similarity=0.338 Sum_probs=31.9
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHh
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFG 411 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~ 411 (500)
++.+|+.++++.|+++|+++.++|+........+-.
T Consensus 726 ~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~ 761 (1178)
T PLN03190 726 KLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGY 761 (1178)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH
Confidence 789999999999999999999999988777766643
No 257
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=85.53 E-value=1.5 Score=49.14 Aligned_cols=48 Identities=13% Similarity=-0.031 Sum_probs=29.7
Q ss_pred CCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCCCCCCCCCCCCceeeCCccC
Q 010820 447 GVDKPSEILFVTDVYQEATAAKAAGLEVVISIRPGNGPLPENHGFKTINSFAE 499 (500)
Q Consensus 447 ~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~e 499 (500)
+++ ++.++++||+.+|..+.+.++.....|.-+.. ...+.+++++..|
T Consensus 668 ~~~-~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~~~e 715 (726)
T PRK14501 668 AGP-YDFVLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPSQRE 715 (726)
T ss_pred cCC-CCEEEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCCHHH
Confidence 344 67999999999999999987432222222221 1223666666443
No 258
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=84.55 E-value=3 Score=42.40 Aligned_cols=44 Identities=5% Similarity=-0.031 Sum_probs=28.3
Q ss_pred cccCCC---CHHHHHHHHHHcCCCCCCcEE-EEeCCHhhHHHHHHcCCcE
Q 010820 429 AVGNKR---ETPSYVEITNSLGVDKPSEIL-FVTDVYQEATAAKAAGLEV 474 (500)
Q Consensus 429 ~~~~KP---~p~~~~~~l~~l~v~~p~~~l-~VGDs~~Di~aA~~aG~~~ 474 (500)
.+..|| +..++..+.+.+.. +...+ =+|+...|+.+=++.|++.
T Consensus 470 lIlrkpE~FKiayLndl~slf~e--~~PFyAGFGNriTDvisY~~vgIp~ 517 (580)
T COG5083 470 LILRKPEVFKIAYLNDLKSLFIE--FDPFYAGFGNRITDVISYSNVGIPK 517 (580)
T ss_pred hhhcChHHHHHHHHHHHHHhhCc--CChhhccccccchhheeeccccCCh
Confidence 444566 44455555555544 33332 4789999999999998876
No 259
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=84.54 E-value=1.7 Score=42.27 Aligned_cols=14 Identities=29% Similarity=0.503 Sum_probs=9.7
Q ss_pred eEEEEecCCccccc
Q 010820 285 RCIVLDIEGTTTPI 298 (500)
Q Consensus 285 k~vlFD~DGTL~~~ 298 (500)
.+|+||+||||++.
T Consensus 15 ~li~~D~DGTLl~~ 28 (266)
T PRK10187 15 YAWFFDLDGTLAEI 28 (266)
T ss_pred EEEEEecCCCCCCC
Confidence 56777777777743
No 260
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=84.08 E-value=2.3 Score=45.35 Aligned_cols=100 Identities=14% Similarity=0.226 Sum_probs=60.3
Q ss_pred CHHHHHHHHHhCCcEEEEEcCCc---HHHHHHHHhccCc-------ccc----cccccccccccccCCC---CHHHHHHH
Q 010820 380 DVPEALEKWHSLGTKVYIYSSGS---RLAQRLIFGNSNY-------GDL----RKYLSGFFDTAVGNKR---ETPSYVEI 442 (500)
Q Consensus 380 gv~~~L~~L~~~G~~l~v~Tn~~---~~~~~~~l~~~~~-------~~l----~~~f~~~~d~~~~~KP---~p~~~~~~ 442 (500)
||.++..+++++||++.-+|... ....+..|..+.- +.+ ...|...+-.++.+|| +-+++..+
T Consensus 562 GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdGPViLSPd~lf~Al~REVI~RkPe~FKIAcL~DI 641 (738)
T KOG2116|consen 562 GVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDGPVILSPDSLFAALHREVIERKPEVFKIACLTDI 641 (738)
T ss_pred hHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCCCEEeCCCcchHHHHHHHHHcCchhhhHHHHHHH
Confidence 56677778888888888888744 3333444444320 000 1112222234566788 56677777
Q ss_pred HHHcCCCCCCcE-EEEeCCHhhHHHHHHcCCcE--EEEcCC
Q 010820 443 TNSLGVDKPSEI-LFVTDVYQEATAAKAAGLEV--VISIRP 480 (500)
Q Consensus 443 l~~l~v~~p~~~-l~VGDs~~Di~aA~~aG~~~--i~v~~~ 480 (500)
...+.-. .... .-+|+..+|+.+=++.|+.. |++..+
T Consensus 642 k~LF~p~-~nPFYAgFGNR~TDviSY~~VgVP~~RIFtINp 681 (738)
T KOG2116|consen 642 KNLFPPS-GNPFYAGFGNRITDVISYRQVGVPLSRIFTINP 681 (738)
T ss_pred HHhcCCC-CCceeeecCCCcccceeeeeecCCccceEEECC
Confidence 7777632 3333 33789999999999999987 555444
No 261
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=83.73 E-value=2.6 Score=40.74 Aligned_cols=35 Identities=26% Similarity=0.147 Sum_probs=20.5
Q ss_pred cCCCHHHHHHHHHhC-CcEEEEEcCCcHHHHHHHHh
Q 010820 377 VFDDVPEALEKWHSL-GTKVYIYSSGSRLAQRLIFG 411 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~-G~~l~v~Tn~~~~~~~~~l~ 411 (500)
+.+++.++|+.|..+ ...++|+|+.+....+..+.
T Consensus 41 ~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~ 76 (266)
T COG1877 41 PDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG 76 (266)
T ss_pred CCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC
Confidence 555566666666554 22366666666666666554
No 262
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=82.97 E-value=1.9 Score=43.54 Aligned_cols=100 Identities=15% Similarity=0.135 Sum_probs=71.5
Q ss_pred CCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCC------------------------
Q 010820 378 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNK------------------------ 433 (500)
Q Consensus 378 ~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~K------------------------ 433 (500)
.+-.+.+|..++++|-++.++||+...+........-..++..+|+-.. +...|
T Consensus 200 d~~~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~--~~a~Kp~ff~e~~vlreV~t~~g~l~~g~ 277 (424)
T KOG2469|consen 200 DGTIVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVE--TRAAKPGFFHEGTVLREVEPQEGLLKNGD 277 (424)
T ss_pred cCccccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEE--EeccCCccccccceeeeeccccccccccc
Confidence 3444559999999999999999999888888776663235555554333 11112
Q ss_pred ----------CCHHHHHHHHHHcCCCCCCcEEEEeCCH-hhHHHH-HHcCCcEEEEcCC
Q 010820 434 ----------RETPSYVEITNSLGVDKPSEILFVTDVY-QEATAA-KAAGLEVVISIRP 480 (500)
Q Consensus 434 ----------P~p~~~~~~l~~l~v~~p~~~l~VGDs~-~Di~aA-~~aG~~~i~v~~~ 480 (500)
+.+-.-..+++.+++. ..++++|||+. .||.-- ++-|+.++.|...
T Consensus 278 ~~~p~e~~~~ySggs~~~~~~~l~~~-g~diLy~gdHi~~dvl~skk~~~wrt~lv~pe 335 (424)
T KOG2469|consen 278 NTGPLEQGGVYSGGSLKTVETSMKVK-GKDILYGGDHIWGDVLVSKKRRGWRTVLVAPE 335 (424)
T ss_pred cCCcchhcccCCcchHHHHHHHhccc-ccceeecccceeeeEEecceecceEEEEEehh
Confidence 2445667788888887 89999999998 566544 5589999988754
No 263
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=82.51 E-value=6.4 Score=37.58 Aligned_cols=72 Identities=13% Similarity=0.140 Sum_probs=51.1
Q ss_pred CcEEEEEcCCcHHHHHHHHhccCccccccc---ccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHH
Q 010820 392 GTKVYIYSSGSRLAQRLIFGNSNYGDLRKY---LSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDVYQEATAAK 468 (500)
Q Consensus 392 G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~---f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~ 468 (500)
-++++++|..+...-.+.++.+ ..| ++..| ...+-||.. +++.++-. +|++|....++.|.
T Consensus 186 piRtalVTAR~apah~RvI~TL-----r~Wgv~vDEaf--FLgG~~K~~----vL~~~~ph-----IFFDDQ~~H~~~a~ 249 (264)
T PF06189_consen 186 PIRTALVTARSAPAHERVIRTL-----RSWGVRVDEAF--FLGGLPKGP----VLKAFRPH-----IFFDDQDGHLESAS 249 (264)
T ss_pred ceEEEEEEcCCCchhHHHHHHH-----HHcCCcHhHHH--HhCCCchhH----HHHhhCCC-----EeecCchhhhhHhh
Confidence 4689999998866668887766 333 33322 223445544 45565544 99999999999999
Q ss_pred HcCCcEEEEcCC
Q 010820 469 AAGLEVVISIRP 480 (500)
Q Consensus 469 ~aG~~~i~v~~~ 480 (500)
.++.++.|..+
T Consensus 250 -~~vps~hVP~g 260 (264)
T PF06189_consen 250 -KVVPSGHVPYG 260 (264)
T ss_pred -cCCCEEeccCC
Confidence 89999999876
No 264
>PRK10444 UMP phosphatase; Provisional
Probab=81.34 E-value=1.2 Score=42.88 Aligned_cols=36 Identities=8% Similarity=0.063 Sum_probs=29.4
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhc
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGN 412 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~ 412 (500)
++|++.++|+.|+++|.++.++||+.........++
T Consensus 18 ~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~ 53 (248)
T PRK10444 18 AVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANR 53 (248)
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHH
Confidence 789999999999999999999999886544443333
No 265
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=81.00 E-value=16 Score=36.16 Aligned_cols=97 Identities=16% Similarity=0.170 Sum_probs=65.8
Q ss_pred ccCCCHHHHHHHHHhC---CcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 376 EVFDDVPEALEKWHSL---GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~---G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
.++|+..++++..++. |+.+.++++.+....+++. .+|-.-+.++ -..+.+ +.+-.+|+.+..+.+..+++
T Consensus 178 ~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~-~~g~~avmPl-~~pIGs-g~gv~~p~~i~~~~e~~~vp--- 251 (326)
T PRK11840 178 TLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLE-DAGAVAVMPL-GAPIGS-GLGIQNPYTIRLIVEGATVP--- 251 (326)
T ss_pred CcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-hcCCEEEeec-cccccC-CCCCCCHHHHHHHHHcCCCc---
Confidence 4778888888877776 9999666666766666654 3321000111 111111 11222999999999997765
Q ss_pred cEEEEeCCH---hhHHHHHHcCCcEEEEcCC
Q 010820 453 EILFVTDVY---QEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 453 ~~l~VGDs~---~Di~aA~~aG~~~i~v~~~ 480 (500)
++||-.. .|+..|-..|...++++.+
T Consensus 252 --VivdAGIg~~sda~~AmelGadgVL~nSa 280 (326)
T PRK11840 252 --VLVDAGVGTASDAAVAMELGCDGVLMNTA 280 (326)
T ss_pred --EEEeCCCCCHHHHHHHHHcCCCEEEEcce
Confidence 8888654 8999999999999999976
No 266
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=80.71 E-value=0.89 Score=38.74 Aligned_cols=14 Identities=29% Similarity=0.382 Sum_probs=12.2
Q ss_pred eEEEEecCCccccc
Q 010820 285 RCIVLDIEGTTTPI 298 (500)
Q Consensus 285 k~vlFD~DGTL~~~ 298 (500)
|+++||+||||++.
T Consensus 1 kli~~DlD~Tl~~~ 14 (128)
T TIGR01681 1 KVIVFDLDNTLWTG 14 (128)
T ss_pred CEEEEeCCCCCCCC
Confidence 57999999999954
No 267
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=80.09 E-value=28 Score=33.10 Aligned_cols=97 Identities=15% Similarity=0.146 Sum_probs=64.5
Q ss_pred ccCCCHHHHHHHHHhC---CcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 376 EVFDDVPEALEKWHSL---GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~---G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
.++|+..++++..++. |+.+..+++.+....+++. .+|-.-+.. +-..+.+ +.+--+|+.+..+.+..+++
T Consensus 104 ~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~-~~G~~~vmP-lg~pIGs-g~Gi~~~~~I~~I~e~~~vp--- 177 (248)
T cd04728 104 TLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLE-DAGCAAVMP-LGSPIGS-GQGLLNPYNLRIIIERADVP--- 177 (248)
T ss_pred ccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HcCCCEeCC-CCcCCCC-CCCCCCHHHHHHHHHhCCCc---
Confidence 4788888888888777 9988856666666666654 332111111 1111111 12333688998888875554
Q ss_pred cEEEEe---CCHhhHHHHHHcCCcEEEEcCC
Q 010820 453 EILFVT---DVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 453 ~~l~VG---Ds~~Di~aA~~aG~~~i~v~~~ 480 (500)
+++| .++.|+..|...|...+.++..
T Consensus 178 --VI~egGI~tpeda~~AmelGAdgVlV~SA 206 (248)
T cd04728 178 --VIVDAGIGTPSDAAQAMELGADAVLLNTA 206 (248)
T ss_pred --EEEeCCCCCHHHHHHHHHcCCCEEEEChH
Confidence 6776 4469999999999999999876
No 268
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=77.83 E-value=3.1 Score=40.44 Aligned_cols=38 Identities=13% Similarity=0.142 Sum_probs=33.6
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccC
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN 414 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~ 414 (500)
..+.+.++|++|+++|++++++||.+...+...++.++
T Consensus 22 ~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~ 59 (273)
T PRK00192 22 SYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELG 59 (273)
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC
Confidence 34557789999999999999999999999999998884
No 269
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=75.65 E-value=14 Score=31.07 Aligned_cols=86 Identities=19% Similarity=0.151 Sum_probs=55.2
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCc-HHHHHHHHhccCcc--c-ccccccccccccccCCCCHHHHHHHHHHcCCCCC
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGS-RLAQRLIFGNSNYG--D-LRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKP 451 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~-~~~~~~~l~~~~~~--~-l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p 451 (500)
-.|++....|..|+++|+.++++|++. .+.....|+.+... + +......+-......--+-..|..+-...+.. .
T Consensus 44 ~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk~~Gvlkps~e~ft~~~~g~gsklghfke~~n~s~~~-~ 122 (144)
T KOG4549|consen 44 IFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVKQTGVLKPSLEEFTFEAVGDGSKLGHFKEFTNNSNSI-E 122 (144)
T ss_pred eeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccCcccccchhhhcCceeeecCcccchhHHHHhhccCcc-h
Confidence 488999999999999999999999976 56667777666421 1 11111100011111222445667777777887 7
Q ss_pred CcEEEEeCCHh
Q 010820 452 SEILFVTDVYQ 462 (500)
Q Consensus 452 ~~~l~VGDs~~ 462 (500)
++..+++|..+
T Consensus 123 k~~~~fdDesr 133 (144)
T KOG4549|consen 123 KNKQVFDDESR 133 (144)
T ss_pred hceeeeccccc
Confidence 77777777653
No 270
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=75.41 E-value=10 Score=41.99 Aligned_cols=40 Identities=8% Similarity=0.118 Sum_probs=35.7
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccC
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN 414 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~ 414 (500)
.++.|+++++++.|.++++++..+|+.+.-....+-+..+
T Consensus 674 CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~ 713 (1160)
T KOG0209|consen 674 CPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVG 713 (1160)
T ss_pred CCCCccHHHHHHHHhccCceEEEEeCCCccchheehheee
Confidence 4788999999999999999999999999888887777764
No 271
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=74.44 E-value=4.1 Score=38.75 Aligned_cols=97 Identities=18% Similarity=0.194 Sum_probs=52.9
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccc-cccccccc--ccc----cccCCCCHHHHHHHHHHc
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGD-LRKYLSGF--FDT----AVGNKRETPSYVEITNSL 446 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~-l~~~f~~~--~d~----~~~~KP~p~~~~~~l~~l 446 (500)
...+.+|+.++++.|.++++|+.|.|.|--+.+..+++..+..- -...++-+ ||. .+...|--..|.+=-..+
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l 167 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESAL 167 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHH
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcccc
Confidence 35789999999999999999999999999999999998874110 00001111 111 111123111111111001
Q ss_pred -------CCCCCCcEEEEeCCHhhHHHHHHc
Q 010820 447 -------GVDKPSEILFVTDVYQEATAAKAA 470 (500)
Q Consensus 447 -------~v~~p~~~l~VGDs~~Di~aA~~a 470 (500)
.+....+++..||+..|+.+|.-.
T Consensus 168 ~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 168 EDSPYFKQLKKRTNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp TTHHHHHCTTT--EEEEEESSSGGGGTTTT-
T ss_pred cCchHHHHhccCCcEEEecCccCChHhhcCC
Confidence 232267899999999999987665
No 272
>PRK00208 thiG thiazole synthase; Reviewed
Probab=73.97 E-value=52 Score=31.35 Aligned_cols=97 Identities=15% Similarity=0.125 Sum_probs=62.2
Q ss_pred ccCCCHHHHHHHHHhC---CcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 376 EVFDDVPEALEKWHSL---GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~---G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
.++|+..++++..++. |+.+..+++.+....+++. .+|-.-+.. +-..+.+ +.+--+|+.+..+.+..+++
T Consensus 104 ~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~-~~G~~~vmP-lg~pIGs-g~gi~~~~~i~~i~e~~~vp--- 177 (250)
T PRK00208 104 TLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLE-EAGCAAVMP-LGAPIGS-GLGLLNPYNLRIIIEQADVP--- 177 (250)
T ss_pred CCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HcCCCEeCC-CCcCCCC-CCCCCCHHHHHHHHHhcCCe---
Confidence 4678888888877776 9988845555665666654 332111111 1111111 12233688888888775553
Q ss_pred cEEEEe---CCHhhHHHHHHcCCcEEEEcCC
Q 010820 453 EILFVT---DVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 453 ~~l~VG---Ds~~Di~aA~~aG~~~i~v~~~ 480 (500)
+++| .++.|+..|...|...+.++..
T Consensus 178 --VIveaGI~tpeda~~AmelGAdgVlV~SA 206 (250)
T PRK00208 178 --VIVDAGIGTPSDAAQAMELGADAVLLNTA 206 (250)
T ss_pred --EEEeCCCCCHHHHHHHHHcCCCEEEEChH
Confidence 6676 4459999999999999999876
No 273
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=73.12 E-value=16 Score=36.06 Aligned_cols=88 Identities=18% Similarity=0.222 Sum_probs=55.2
Q ss_pred ccccCCCHHHHHHHHHhCC-cEEEEEcCCcHHHHHHHHhccC-----ccc--cc---ccccccccccccCCCCHHHHHHH
Q 010820 374 EGEVFDDVPEALEKWHSLG-TKVYIYSSGSRLAQRLIFGNSN-----YGD--LR---KYLSGFFDTAVGNKRETPSYVEI 442 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G-~~l~v~Tn~~~~~~~~~l~~~~-----~~~--l~---~~f~~~~d~~~~~KP~p~~~~~~ 442 (500)
..+++|||....+.|.+.| -++.-+||++......+-+.++ .+. |. .+++..+.... .-|...+..+
T Consensus 194 tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~~~~P~GPl~L~~~g~~~~~i~~sga--~rK~~~l~ni 271 (373)
T COG4850 194 TRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFITNRNFPYGPLLLRRWGGVLDNIIESGA--ARKGQSLRNI 271 (373)
T ss_pred ccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHhcCCCCCCchhHhhcCCcccccccchh--hhcccHHHHH
Confidence 3469999999999999888 7999999988655544333321 110 11 11222332211 2244456667
Q ss_pred HHHcCCCCCCcEEEEeCCH-hhHHH
Q 010820 443 TNSLGVDKPSEILFVTDVY-QEATA 466 (500)
Q Consensus 443 l~~l~v~~p~~~l~VGDs~-~Di~a 466 (500)
+.+++-. ..+.|||+. .|.+.
T Consensus 272 l~~~p~~---kfvLVGDsGE~DpeI 293 (373)
T COG4850 272 LRRYPDR---KFVLVGDSGEHDPEI 293 (373)
T ss_pred HHhCCCc---eEEEecCCCCcCHHH
Confidence 8787644 899999996 67653
No 274
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=71.12 E-value=7.3 Score=38.12 Aligned_cols=103 Identities=15% Similarity=0.089 Sum_probs=61.7
Q ss_pred ccccCCCHHHHHHHHHhCC-cEEEEEcCCcHHHHHHHHhccCccccccc-ccccccc--cccCCC-CHHHHHHHHHHcCC
Q 010820 374 EGEVFDDVPEALEKWHSLG-TKVYIYSSGSRLAQRLIFGNSNYGDLRKY-LSGFFDT--AVGNKR-ETPSYVEITNSLGV 448 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G-~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~-f~~~~d~--~~~~KP-~p~~~~~~l~~l~v 448 (500)
...+||...++++.+|+.| .+++|+||+....+...++.. ++--. ++..-+. ..--+| .+..++++++-+..
T Consensus 90 EPTLy~~L~elI~~~k~~g~~~tflvTNgslpdv~~~L~~~---dql~~sLdA~~~~~~~~InRP~~~~~~e~ile~L~~ 166 (296)
T COG0731 90 EPTLYPNLGELIEEIKKRGKKTTFLVTNGSLPDVLEELKLP---DQLYVSLDAPDEKTFRRINRPHKKDSWEKILEGLEI 166 (296)
T ss_pred CcccccCHHHHHHHHHhcCCceEEEEeCCChHHHHHHhccC---CEEEEEeccCCHHHHHHhcCCCCcchHHHHHHHHHH
Confidence 3569999999999999999 799999999995555555422 22222 3333211 112355 44677777777755
Q ss_pred CCCCc----E---EEEeCCHhh----HH----HHHHcCCcEEEEcCC
Q 010820 449 DKPSE----I---LFVTDVYQE----AT----AAKAAGLEVVISIRP 480 (500)
Q Consensus 449 ~~p~~----~---l~VGDs~~D----i~----aA~~aG~~~i~v~~~ 480 (500)
- ++. . .++..+.|| ++ --+.+.-..|.++.+
T Consensus 167 ~-~~~~~~~~vir~tlvkg~N~~~e~~~~~a~ll~~~~Pd~velk~~ 212 (296)
T COG0731 167 F-RSEYKGRTVIRTTLVKGINDDEEELEEYAELLERINPDFVELKTY 212 (296)
T ss_pred h-hhcCCCcEEEEEEEeccccCChHHHHHHHHHHHhcCCCeEEEecC
Confidence 4 332 1 233443322 22 233467777888765
No 275
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway [].; GO: 0009228 thiamine biosynthetic process; PDB: 1WV2_B 1TYG_C 1XM3_B 2HTM_C 2YZR_C.
Probab=70.97 E-value=42 Score=31.65 Aligned_cols=97 Identities=13% Similarity=0.104 Sum_probs=61.1
Q ss_pred ccCCCHHHHHH---HHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 376 EVFDDVPEALE---KWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 376 ~~~pgv~~~L~---~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
.++|+..++|+ .|.+.|+.+.-.++.+....+++. ..|-.-+..+ -.-+ ..+.+--++..++.++++.+++
T Consensus 104 ~L~PD~~etl~Aae~Lv~eGF~VlPY~~~D~v~akrL~-d~GcaavMPl-gsPI-GSg~Gi~n~~~l~~i~~~~~vP--- 177 (247)
T PF05690_consen 104 TLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLE-DAGCAAVMPL-GSPI-GSGRGIQNPYNLRIIIERADVP--- 177 (247)
T ss_dssp T--B-HHHHHHHHHHHHHTT-EEEEEE-S-HHHHHHHH-HTT-SEBEEB-SSST-TT---SSTHHHHHHHHHHGSSS---
T ss_pred CcCCChhHHHHHHHHHHHCCCEEeecCCCCHHHHHHHH-HCCCCEEEec-cccc-ccCcCCCCHHHHHHHHHhcCCc---
Confidence 46777766665 567889999999998888877754 4421111111 1111 1233455899999999999998
Q ss_pred cEEEEeCC---HhhHHHHHHcCCcEEEEcCC
Q 010820 453 EILFVTDV---YQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 453 ~~l~VGDs---~~Di~aA~~aG~~~i~v~~~ 480 (500)
+.|+-. ++|..-|-..|+..|++|..
T Consensus 178 --vIvDAGiG~pSdaa~AMElG~daVLvNTA 206 (247)
T PF05690_consen 178 --VIVDAGIGTPSDAAQAMELGADAVLVNTA 206 (247)
T ss_dssp --BEEES---SHHHHHHHHHTT-SEEEESHH
T ss_pred --EEEeCCCCCHHHHHHHHHcCCceeehhhH
Confidence 777655 49999999999999999864
No 276
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=70.43 E-value=8.6 Score=43.49 Aligned_cols=36 Identities=22% Similarity=0.237 Sum_probs=25.8
Q ss_pred cCCCHHHHHHHHHhC-CcEEEEEcCCcHHHHHHHHhc
Q 010820 377 VFDDVPEALEKWHSL-GTKVYIYSSGSRLAQRLIFGN 412 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~-G~~l~v~Tn~~~~~~~~~l~~ 412 (500)
+.|++.++|+.|.+. +..++|+|+.+.+..+..+..
T Consensus 533 p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 569 (797)
T PLN03063 533 LHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGE 569 (797)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCC
Confidence 556677778877654 566888888887777777754
No 277
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=70.18 E-value=4.9 Score=38.08 Aligned_cols=39 Identities=18% Similarity=0.219 Sum_probs=23.3
Q ss_pred CHHHHHHHHHHcCCC--CCCcEEEEeCCHhhHHHHHHcCCc
Q 010820 435 ETPSYVEITNSLGVD--KPSEILFVTDVYQEATAAKAAGLE 473 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~--~p~~~l~VGDs~~Di~aA~~aG~~ 473 (500)
|......++++++.. ++.-++|+||...|-.+-+.+.-.
T Consensus 166 KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~ 206 (235)
T PF02358_consen 166 KGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALREL 206 (235)
T ss_dssp HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS
T ss_pred hHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhc
Confidence 344555566665531 145789999999998888886543
No 278
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=67.47 E-value=3.1 Score=36.67 Aligned_cols=16 Identities=38% Similarity=0.561 Sum_probs=12.1
Q ss_pred eEEEEecCCccccccc
Q 010820 285 RCIVLDIEGTTTPISF 300 (500)
Q Consensus 285 k~vlFD~DGTL~~~~~ 300 (500)
|+++||+||||+....
T Consensus 1 k~LVlDLD~TLv~~~~ 16 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSS 16 (159)
T ss_dssp EEEEEE-CTTTEEEES
T ss_pred CEEEEeCCCcEEEEee
Confidence 6899999999995443
No 279
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=66.40 E-value=12 Score=42.85 Aligned_cols=38 Identities=21% Similarity=0.233 Sum_probs=31.9
Q ss_pred ccCCCHHHHHHHHHhC-CcEEEEEcCCcHHHHHHHHhcc
Q 010820 376 EVFDDVPEALEKWHSL-GTKVYIYSSGSRLAQRLIFGNS 413 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~-G~~l~v~Tn~~~~~~~~~l~~~ 413 (500)
.+.|++.++|+.|.+. +..++|+|+.....+...+...
T Consensus 622 ~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~ 660 (934)
T PLN03064 622 RLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF 660 (934)
T ss_pred CCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC
Confidence 3667888999999765 6789999999999999988664
No 280
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=66.32 E-value=7.4 Score=36.14 Aligned_cols=38 Identities=16% Similarity=0.084 Sum_probs=32.9
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccC
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN 414 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~ 414 (500)
+.|...++|++|+++|++++++|+.+.......++.++
T Consensus 19 i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~ 56 (215)
T TIGR01487 19 ISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIG 56 (215)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhC
Confidence 44567789999999999999999999998888887774
No 281
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=66.31 E-value=5.7 Score=34.02 Aligned_cols=39 Identities=15% Similarity=-0.033 Sum_probs=30.5
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCC--cHHHHHHHHhcc
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSG--SRLAQRLIFGNS 413 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~--~~~~~~~~l~~~ 413 (500)
.....|++.+++++|-+. |.++|+|.. -......+.+.+
T Consensus 66 nL~V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl 106 (180)
T COG4502 66 NLGVQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWL 106 (180)
T ss_pred hcCccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHH
Confidence 356889999999999875 999999976 566666666555
No 282
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=65.76 E-value=19 Score=40.13 Aligned_cols=97 Identities=15% Similarity=0.141 Sum_probs=64.9
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccc-c-------ccccccc-----------cccCCC-
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRK-Y-------LSGFFDT-----------AVGNKR- 434 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~-~-------f~~~~d~-----------~~~~KP- 434 (500)
-+..||+++.++.+++.|+++-.+|+.+....+.+-...|+..-.. + |..+-+. ..+..|
T Consensus 646 DPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~ 725 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPN 725 (1034)
T ss_pred CCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCc
Confidence 4788999999999999999999999999999998887775421111 0 1111100 112233
Q ss_pred CHHHHHHHHHHcCCCCCCcEEE-EeCCHhhHHHHHHcCCcEEE
Q 010820 435 ETPSYVEITNSLGVDKPSEILF-VTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~p~~~l~-VGDs~~Di~aA~~aG~~~i~ 476 (500)
+...+.+.+++ -.+++- -||+.||-.+-+.|.+....
T Consensus 726 DK~lLVk~L~~-----~g~VVAVTGDGTNDaPALkeADVGlAM 763 (1034)
T KOG0204|consen 726 DKHLLVKGLIK-----QGEVVAVTGDGTNDAPALKEADVGLAM 763 (1034)
T ss_pred hHHHHHHHHHh-----cCcEEEEecCCCCCchhhhhcccchhc
Confidence 34444455543 234544 59999999999999876643
No 283
>CHL00162 thiG thiamin biosynthesis protein G; Validated
Probab=65.02 E-value=65 Score=30.79 Aligned_cols=97 Identities=11% Similarity=0.052 Sum_probs=69.3
Q ss_pred ccCCCHHHHHH---HHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 376 EVFDDVPEALE---KWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 376 ~~~pgv~~~L~---~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
.++|+..++|+ .|-+.|+.+...+|.+....+++. ..|-.-+..+ -.-+ ..+.+-.+|..++.+.++.+++
T Consensus 118 ~LlPD~~etl~Aae~Lv~eGF~VlPY~~~D~v~a~rLe-d~Gc~aVMPl-gsPI-GSg~Gl~n~~~l~~i~e~~~vp--- 191 (267)
T CHL00162 118 YLLPDPIGTLKAAEFLVKKGFTVLPYINADPMLAKHLE-DIGCATVMPL-GSPI-GSGQGLQNLLNLQIIIENAKIP--- 191 (267)
T ss_pred ccCCChHHHHHHHHHHHHCCCEEeecCCCCHHHHHHHH-HcCCeEEeec-cCcc-cCCCCCCCHHHHHHHHHcCCCc---
Confidence 46777766665 566889999999999988887754 4421111111 1111 1234456999999999988876
Q ss_pred cEEEEeCC---HhhHHHHHHcCCcEEEEcCC
Q 010820 453 EILFVTDV---YQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 453 ~~l~VGDs---~~Di~aA~~aG~~~i~v~~~ 480 (500)
++||-. +.|+..|...|...++++.+
T Consensus 192 --VivdAGIgt~sDa~~AmElGaDgVL~nSa 220 (267)
T CHL00162 192 --VIIDAGIGTPSEASQAMELGASGVLLNTA 220 (267)
T ss_pred --EEEeCCcCCHHHHHHHHHcCCCEEeecce
Confidence 778755 49999999999999999876
No 284
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=64.60 E-value=4.8 Score=39.37 Aligned_cols=50 Identities=14% Similarity=0.082 Sum_probs=37.6
Q ss_pred cCCCCHHHHHHHH--------HHcCCCCCCcEEEEeCCH-hhHHHHH---------------HcCCcEEEEcCC
Q 010820 431 GNKRETPSYVEIT--------NSLGVDKPSEILFVTDVY-QEATAAK---------------AAGLEVVISIRP 480 (500)
Q Consensus 431 ~~KP~p~~~~~~l--------~~l~v~~p~~~l~VGDs~-~Di~aA~---------------~aG~~~i~v~~~ 480 (500)
.+||++-.|..+. ++.+..|++...||||++ .|+..|+ +-||.+|+|..+
T Consensus 269 ~GKPt~ltY~~A~~vl~~~ak~~~~~~~~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV~TG 342 (389)
T KOG1618|consen 269 LGKPTKLTYDYAEDVLRRQAKRRGGAAPIKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWISILVRTG 342 (389)
T ss_pred cCCCceehHHhHHHHHHHHHHhhcccCCcceeeeecCCCcccccccccccccccccccccccCCCceEEEEeee
Confidence 3688666555443 233444688999999999 8999997 789999999876
No 285
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=63.60 E-value=19 Score=33.24 Aligned_cols=37 Identities=16% Similarity=0.188 Sum_probs=32.1
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhcc
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 413 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~ 413 (500)
..||+.++|+.|++++.++=.+||...+.-+.+.+++
T Consensus 24 avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL 60 (262)
T KOG3040|consen 24 AVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERL 60 (262)
T ss_pred cCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHH
Confidence 7899999999999999999999998877777666555
No 286
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=62.49 E-value=10 Score=35.39 Aligned_cols=38 Identities=18% Similarity=0.021 Sum_probs=32.3
Q ss_pred CCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCc
Q 010820 378 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNY 415 (500)
Q Consensus 378 ~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~ 415 (500)
.|...++|++|+++|++++++|+.+...+...++.+++
T Consensus 22 ~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 59 (230)
T PRK01158 22 SLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGT 59 (230)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCC
Confidence 34567899999999999999999999988888877743
No 287
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=61.37 E-value=6.9 Score=32.28 Aligned_cols=36 Identities=25% Similarity=0.473 Sum_probs=25.6
Q ss_pred eeeeeCCC---CchhHHHHHHHHHhhCCCccEEEEcccccee
Q 010820 174 VPIIENTA---YENELTDSLAKAIDAYPKATAVLVRNHGIYV 212 (500)
Q Consensus 174 vp~~~~~~---~~~~l~~~v~~~l~~~~~~~~vll~nHG~~~ 212 (500)
||+++... ...++++.|.+++.+. -.+.|.|||+-.
T Consensus 1 iPvIDls~~~~~~~~~~~~l~~A~~~~---GFf~l~nhGi~~ 39 (116)
T PF14226_consen 1 IPVIDLSPDPADREEVAEQLRDACEEW---GFFYLVNHGIPQ 39 (116)
T ss_dssp --EEEHGGCHHHHHHHHHHHHHHHHHT---SEEEEESSSSSH
T ss_pred CCeEECCCCCccHHHHHHHHHHHHHhC---CEEEEecccccc
Confidence 56666642 3457788888899885 889999999753
No 288
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=59.67 E-value=5.1 Score=38.22 Aligned_cols=16 Identities=31% Similarity=0.546 Sum_probs=13.2
Q ss_pred ceEEEEecCCcccccc
Q 010820 284 PRCIVLDIEGTTTPIS 299 (500)
Q Consensus 284 ~k~vlFD~DGTL~~~~ 299 (500)
-++++||+||||.++.
T Consensus 3 ~~~l~lD~DGTL~~~~ 18 (244)
T TIGR00685 3 KRAFFFDYDGTLSEIV 18 (244)
T ss_pred cEEEEEecCccccCCc
Confidence 3789999999999643
No 289
>PRK08324 short chain dehydrogenase; Validated
Probab=59.40 E-value=17 Score=40.43 Aligned_cols=52 Identities=17% Similarity=0.318 Sum_probs=47.5
Q ss_pred CCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q 010820 198 PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNH 249 (500)
Q Consensus 198 ~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~ 249 (500)
|..+++|+.|-|++++|.+..+|....+.+|++++....+..+|...+++..
T Consensus 345 ~~p~~~l~~g~g~~~~g~~~~~a~~~~d~~~~~~~~~~~a~~~~~~~~l~~~ 396 (681)
T PRK08324 345 PNPRVVLIPGLGMFSFGKDKKTARVAADIYENAINVMRGAEAVGRYEPLSEQ 396 (681)
T ss_pred CCCeEEEECCCceEEeCCCHHHhhhhHHHHHHHHHHHhhhhhcCCccCCChh
Confidence 4569999999999999999999999999999999999999999988777654
No 290
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=58.61 E-value=14 Score=35.54 Aligned_cols=37 Identities=11% Similarity=0.098 Sum_probs=32.2
Q ss_pred CCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCc
Q 010820 379 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNY 415 (500)
Q Consensus 379 pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~ 415 (500)
+...++|++|+++|++++++|+.+...+...++.+++
T Consensus 23 ~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 59 (270)
T PRK10513 23 PAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHM 59 (270)
T ss_pred HHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCC
Confidence 4466899999999999999999999998888888853
No 291
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=58.45 E-value=14 Score=34.32 Aligned_cols=37 Identities=22% Similarity=0.159 Sum_probs=31.4
Q ss_pred CCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccC
Q 010820 378 FDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN 414 (500)
Q Consensus 378 ~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~ 414 (500)
.+...++|++|+++|++++++|+.+.......++.++
T Consensus 17 ~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~ 53 (225)
T TIGR01482 17 NESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIG 53 (225)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhC
Confidence 3446689999999999999999999988888887774
No 292
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=58.44 E-value=15 Score=35.26 Aligned_cols=38 Identities=21% Similarity=0.267 Sum_probs=32.7
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccC
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN 414 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~ 414 (500)
+.|...++|++|+++|++++++|+.+...+...++.++
T Consensus 21 i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~ 58 (272)
T PRK10530 21 ILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALA 58 (272)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcC
Confidence 34456789999999999999999999998888888884
No 293
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=56.37 E-value=25 Score=33.48 Aligned_cols=92 Identities=10% Similarity=0.078 Sum_probs=59.5
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccc--ccccc---c--c--cccCCC-------CHHHH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY--LSGFF---D--T--AVGNKR-------ETPSY 439 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~--f~~~~---d--~--~~~~KP-------~p~~~ 439 (500)
.+..|+.++...|..+++|+.|.|.+--..++.++.... .+... |.+-+ + . .+..+| +....
T Consensus 138 ~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~--~~~pn~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v~ 215 (298)
T KOG3128|consen 138 ALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKL--VLHPNVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSVL 215 (298)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHh--ccCccHHhhhhhhhhcccchhhhhhHHHHHHHccchHHH
Confidence 467889999999999999999999999888877766553 11111 22211 1 1 112333 23333
Q ss_pred HHHHHHcCC-CCCCcEEEEeCCHhhHHHHHH
Q 010820 440 VEITNSLGV-DKPSEILFVTDVYQEATAAKA 469 (500)
Q Consensus 440 ~~~l~~l~v-~~p~~~l~VGDs~~Di~aA~~ 469 (500)
+...+.+.. +....+++-||+.-|+..|--
T Consensus 216 ~~~s~yf~~~~~~~nVillGdsigdl~ma~g 246 (298)
T KOG3128|consen 216 QNESEYFHQLAGRVNVILLGDSIGDLHMADG 246 (298)
T ss_pred HhhhHHHhhccCCceEEEeccccccchhhcC
Confidence 333444432 226788999999999988765
No 294
>COG2022 ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism]
Probab=56.15 E-value=1.2e+02 Score=28.69 Aligned_cols=97 Identities=14% Similarity=0.114 Sum_probs=69.0
Q ss_pred ccCCCHHHHHH---HHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCC
Q 010820 376 EVFDDVPEALE---KWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPS 452 (500)
Q Consensus 376 ~~~pgv~~~L~---~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~ 452 (500)
.+.|+..++|+ .|-+.|+.+...|+.+.-..+++. ..|---+.++ ..-+. .+.+--+|..++.++++.+++
T Consensus 111 tLlPD~~etl~Aae~Lv~eGF~VlPY~~dD~v~arrLe-e~GcaavMPl-~aPIG-Sg~G~~n~~~l~iiie~a~VP--- 184 (262)
T COG2022 111 TLLPDPIETLKAAEQLVKEGFVVLPYTTDDPVLARRLE-EAGCAAVMPL-GAPIG-SGLGLQNPYNLEIIIEEADVP--- 184 (262)
T ss_pred ccCCChHHHHHHHHHHHhCCCEEeeccCCCHHHHHHHH-hcCceEeccc-ccccc-CCcCcCCHHHHHHHHHhCCCC---
Confidence 57788777765 456789999999999988888765 3321111111 11111 223344899999999999998
Q ss_pred cEEEEeCC---HhhHHHHHHcCCcEEEEcCC
Q 010820 453 EILFVTDV---YQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 453 ~~l~VGDs---~~Di~aA~~aG~~~i~v~~~ 480 (500)
+.|+-. ++|...|-..|++.|.+|..
T Consensus 185 --viVDAGiG~pSdAa~aMElG~DaVL~NTA 213 (262)
T COG2022 185 --VIVDAGIGTPSDAAQAMELGADAVLLNTA 213 (262)
T ss_pred --EEEeCCCCChhHHHHHHhcccceeehhhH
Confidence 777755 49999999999999999875
No 295
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=56.02 E-value=65 Score=32.56 Aligned_cols=43 Identities=19% Similarity=0.204 Sum_probs=37.6
Q ss_pred CHHHHHHHHHHcCCCCCCcEEEEeCCHhhHHHHHHcCCcEEEEcC
Q 010820 435 ETPSYVEITNSLGVDKPSEILFVTDVYQEATAAKAAGLEVVISIR 479 (500)
Q Consensus 435 ~p~~~~~~l~~l~v~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~ 479 (500)
+..+|++|.+++|-+ -..+.|||+..--.+|++..|++..++.
T Consensus 410 KescFerI~~RFg~K--~~yvvIgdG~eee~aAK~ln~PfwrI~~ 452 (468)
T KOG3107|consen 410 KESCFERIQSRFGRK--VVYVVIGDGVEEEQAAKALNMPFWRISS 452 (468)
T ss_pred HHHHHHHHHHHhCCc--eEEEEecCcHHHHHHHHhhCCceEeecc
Confidence 678999999999964 5567799999999999999999988864
No 296
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=55.36 E-value=15 Score=39.91 Aligned_cols=79 Identities=15% Similarity=0.120 Sum_probs=52.2
Q ss_pred ccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCc
Q 010820 374 EGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSE 453 (500)
Q Consensus 374 ~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~ 453 (500)
..++.|++.++|+++.+. |.++|+|-+.+.++..+.+-+. -=..||...+ +.++.++. .+.+...... |..
T Consensus 199 ~vKlRP~~~efL~~~skl-femhVyTmg~R~YA~~i~~liD--P~~~lF~dRI---isrde~~~--~kt~dL~~~~-p~g 269 (635)
T KOG0323|consen 199 LVKLRPFVHEFLKEANKL-FEMHVYTMGTRDYALEIAKLID--PEGKYFGDRI---ISRDESPF--FKTLDLVLLF-PCG 269 (635)
T ss_pred EEEeCccHHHHHHHHHhh-ceeEEEeccchHHHHHHHHHhC--CCCccccceE---EEecCCCc--ccccccccCC-CCC
Confidence 357999999999999876 9999999999999999987663 1223344333 33444332 3333333343 333
Q ss_pred ---EEEEeCCH
Q 010820 454 ---ILFVTDVY 461 (500)
Q Consensus 454 ---~l~VGDs~ 461 (500)
++.|+|+.
T Consensus 270 ~smvvIIDDr~ 280 (635)
T KOG0323|consen 270 DSMVVIIDDRS 280 (635)
T ss_pred CccEEEEeCcc
Confidence 66677776
No 297
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=55.17 E-value=15 Score=35.24 Aligned_cols=65 Identities=17% Similarity=0.145 Sum_probs=45.4
Q ss_pred CCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccc---ccccc----cccccCCC-CHHHHHHHHHHc
Q 010820 379 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY---LSGFF----DTAVGNKR-ETPSYVEITNSL 446 (500)
Q Consensus 379 pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~---f~~~~----d~~~~~KP-~p~~~~~~l~~l 446 (500)
+.+.++|++++++|++++++|+++...+...++.++. ..+ +.+.+ +.....+| +.+....+++.+
T Consensus 23 ~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~---~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~ 95 (264)
T COG0561 23 PETKEALARLREKGVKVVLATGRPLPDVLSILEELGL---DGPLITFNGALIYNGGELLFQKPLSREDVEELLELL 95 (264)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCC---CccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHH
Confidence 3466899999999999999999999999999999953 332 22222 11222233 667777777666
No 298
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=53.75 E-value=17 Score=35.23 Aligned_cols=37 Identities=11% Similarity=0.011 Sum_probs=32.3
Q ss_pred CCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCc
Q 010820 379 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNY 415 (500)
Q Consensus 379 pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~ 415 (500)
+...++|++|+++|++++++|+.+...+...++.+++
T Consensus 27 ~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~ 63 (271)
T PRK03669 27 QPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGL 63 (271)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCC
Confidence 3356899999999999999999999999999988843
No 299
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=50.03 E-value=27 Score=38.86 Aligned_cols=54 Identities=17% Similarity=0.251 Sum_probs=48.8
Q ss_pred CCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCC
Q 010820 198 PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGP 251 (500)
Q Consensus 198 ~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~ 251 (500)
|..+++|+.+=|++.+|+|..+|--..+..+++++....+..+|.-..+++++.
T Consensus 337 ~~p~~~~~~~~g~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (676)
T TIGR02632 337 PNPRVLLIPGVGMISFGKDKETARVAREFYVNAINVMRGAEAVSEYVSLPEQEA 390 (676)
T ss_pred CCCeEEEEcCcceEEecCCHHHhhhhHHHHHHHHHHHhhhhcccceecCchhhc
Confidence 456889999999999999999999999999999999999999998888777643
No 300
>COG3347 Uncharacterized conserved protein [Function unknown]
Probab=47.79 E-value=64 Score=32.61 Aligned_cols=54 Identities=17% Similarity=0.203 Sum_probs=48.2
Q ss_pred CCccEEEEccccceeecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCC
Q 010820 198 PKATAVLVRNHGIYVWGDSWINAKTQAECYHYLFDAAIKLHQLGLDWSTPNHGP 251 (500)
Q Consensus 198 ~~~~~vll~nHG~~~~g~~~~~A~~~~~~lE~~a~~~~~a~~~g~~~~~~~~~~ 251 (500)
|..+++|+.+-|+++.|+|...|--..+..|.+..+.=.|..+|.-.++++.+.
T Consensus 336 p~P~viLipG~Gm~~~g~~~a~A~i~~d~~~~ai~v~~gA~~~g~~~~l~e~e~ 389 (404)
T COG3347 336 PAPRVILIPGLGMLTAGKSAAGARIMGDLYEDAIAVVRGAEALGYYTPLSEAEL 389 (404)
T ss_pred CCCcEEEecCCceeeeccchhhHHHHHHHHHHHHHHhhhhhhhcccccCchhhh
Confidence 346899999999999999999999999999999999999999998888776643
No 301
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=47.12 E-value=15 Score=37.06 Aligned_cols=21 Identities=10% Similarity=-0.107 Sum_probs=17.2
Q ss_pred CCCCceEEEEecCCccccccc
Q 010820 280 SGLFPRCIVLDIEGTTTPISF 300 (500)
Q Consensus 280 ~~~~~k~vlFD~DGTL~~~~~ 300 (500)
.+..+++|-||||.||+.++.
T Consensus 8 ~l~~i~~~GFDmDyTLa~Y~~ 28 (343)
T TIGR02244 8 NLEKIQVFGFDMDYTLAQYKS 28 (343)
T ss_pred ccccCCEEEECccccccccCh
Confidence 356799999999999996653
No 302
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=46.33 E-value=90 Score=28.38 Aligned_cols=87 Identities=8% Similarity=0.025 Sum_probs=45.5
Q ss_pred HHHHHHHHHhC--CcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEe
Q 010820 381 VPEALEKWHSL--GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVT 458 (500)
Q Consensus 381 v~~~L~~L~~~--G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VG 458 (500)
+.+++++|+++ ++++.+-|......... .+.+ .+.....+ ..-..|....+.++++. |+-+++++
T Consensus 37 ~~~Li~~l~~~~p~~~illT~~T~tg~~~~-~~~~-----~~~v~~~~----~P~D~~~~~~rfl~~~~---P~~~i~~E 103 (186)
T PF04413_consen 37 ARPLIKRLRKQRPDLRILLTTTTPTGREMA-RKLL-----PDRVDVQY----LPLDFPWAVRRFLDHWR---PDLLIWVE 103 (186)
T ss_dssp HHHHHHHHTT---TS-EEEEES-CCHHHHH-HGG------GGG-SEEE-------SSHHHHHHHHHHH-----SEEEEES
T ss_pred HHHHHHHHHHhCCCCeEEEEecCCchHHHH-HHhC-----CCCeEEEE----eCccCHHHHHHHHHHhC---CCEEEEEc
Confidence 56789999887 78777766644333222 2222 11111111 12336778888988876 77999998
Q ss_pred CCH--hhHHHHHHcCCcEEEEcCC
Q 010820 459 DVY--QEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 459 Ds~--~Di~aA~~aG~~~i~v~~~ 480 (500)
-.. +=+..|++.|++.+.+|.-
T Consensus 104 tElWPnll~~a~~~~ip~~LvNar 127 (186)
T PF04413_consen 104 TELWPNLLREAKRRGIPVVLVNAR 127 (186)
T ss_dssp ----HHHHHH-----S-EEEEEE-
T ss_pred cccCHHHHHHHhhcCCCEEEEeee
Confidence 765 8899999999999999854
No 303
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=44.91 E-value=2e+02 Score=24.54 Aligned_cols=99 Identities=14% Similarity=0.210 Sum_probs=49.9
Q ss_pred CCHHHHHHHHHhCCcEEEEEcCCcHHHH-HHHHhcc-Ccccccccccccc---ccc-----ccCCCCHHHHHHHHHHcCC
Q 010820 379 DDVPEALEKWHSLGTKVYIYSSGSRLAQ-RLIFGNS-NYGDLRKYLSGFF---DTA-----VGNKRETPSYVEITNSLGV 448 (500)
Q Consensus 379 pgv~~~L~~L~~~G~~l~v~Tn~~~~~~-~~~l~~~-~~~~l~~~f~~~~---d~~-----~~~KP~p~~~~~~l~~l~v 448 (500)
..+.+++.+..++|-++.++=|+..... ......+ +...+.......+ +.. ...--.+.+...+++.+++
T Consensus 22 ~~aa~~i~~~~~~gg~i~~~G~G~S~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (138)
T PF13580_consen 22 EKAADLIAEALRNGGRIFVCGNGHSAAIASHFAADLGGLFGVNRILLPAIALNDDALTAISNDLEYDEGFARQLLALYDI 101 (138)
T ss_dssp HHHHHHHHHHHHTT--EEEEESTHHHHHHHHHHHHHHCHSSSTSSS-SEEETTSTHHHHHHHHTTGGGTHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHCCCEEEEEcCchhhhHHHHHHHHHhcCcCCCcccccccccccchHhhhhcccchhhHHHHHHHHHcCC
Confidence 3355666666778899999999876433 2121111 1111111111111 100 0111244566777888888
Q ss_pred CCCCcEEEE----eCCHh---hHHHHHHcCCcEEEEc
Q 010820 449 DKPSEILFV----TDVYQ---EATAAKAAGLEVVISI 478 (500)
Q Consensus 449 ~~p~~~l~V----GDs~~---Di~aA~~aG~~~i~v~ 478 (500)
. |.+++++ |.+++ =++.|++.|+.+|.+.
T Consensus 102 ~-~gDvli~iS~SG~s~~vi~a~~~Ak~~G~~vIalT 137 (138)
T PF13580_consen 102 R-PGDVLIVISNSGNSPNVIEAAEEAKERGMKVIALT 137 (138)
T ss_dssp --TT-EEEEEESSS-SHHHHHHHHHHHHTT-EEEEEE
T ss_pred C-CCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 8 9999886 66664 4556677899998874
No 304
>PLN02580 trehalose-phosphatase
Probab=44.62 E-value=38 Score=34.70 Aligned_cols=60 Identities=17% Similarity=0.290 Sum_probs=40.4
Q ss_pred CCHHHHHHHHHHcCCCCCCc-E--EEEeCCHhhHHHHHHc-----CCcEEEEcCCCCCCCCCCCCceeeCCccC
Q 010820 434 RETPSYVEITNSLGVDKPSE-I--LFVTDVYQEATAAKAA-----GLEVVISIRPGNGPLPENHGFKTINSFAE 499 (500)
Q Consensus 434 P~p~~~~~~l~~l~v~~p~~-~--l~VGDs~~Di~aA~~a-----G~~~i~v~~~~~~~~~~~~~~~~i~~l~e 499 (500)
-|......+++.+++. ..+ + +||||..+|..+.+.+ |+ .|.|..+.. ...+.|.+++..|
T Consensus 301 ~KG~Av~~Ll~~~g~~-~~d~~~pi~iGDD~TDedmF~~L~~~~~G~-~I~Vgn~~~----~t~A~y~L~dp~e 368 (384)
T PLN02580 301 NKGKAVEFLLESLGLS-NCDDVLPIYIGDDRTDEDAFKVLREGNRGY-GILVSSVPK----ESNAFYSLRDPSE 368 (384)
T ss_pred CHHHHHHHHHHhcCCC-cccceeEEEECCCchHHHHHHhhhccCCce-EEEEecCCC----CccceEEcCCHHH
Confidence 4778899999999987 553 3 8999999999998863 43 344432111 2233677777654
No 305
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=44.58 E-value=26 Score=39.32 Aligned_cols=16 Identities=38% Similarity=0.650 Sum_probs=13.8
Q ss_pred CceEEEEecCCccccc
Q 010820 283 FPRCIVLDIEGTTTPI 298 (500)
Q Consensus 283 ~~k~vlFD~DGTL~~~ 298 (500)
+.++|+||+||||++.
T Consensus 491 ~~rLi~~D~DGTL~~~ 506 (726)
T PRK14501 491 SRRLLLLDYDGTLVPF 506 (726)
T ss_pred cceEEEEecCccccCC
Confidence 4689999999999964
No 306
>PLN02423 phosphomannomutase
Probab=42.76 E-value=24 Score=33.62 Aligned_cols=17 Identities=35% Similarity=0.544 Sum_probs=13.1
Q ss_pred CceEEE-EecCCcccccc
Q 010820 283 FPRCIV-LDIEGTTTPIS 299 (500)
Q Consensus 283 ~~k~vl-FD~DGTL~~~~ 299 (500)
+++.++ |||||||++.+
T Consensus 5 ~~~~i~~~D~DGTLl~~~ 22 (245)
T PLN02423 5 KPGVIALFDVDGTLTAPR 22 (245)
T ss_pred ccceEEEEeccCCCcCCC
Confidence 456666 99999999654
No 307
>PHA02575 1 deoxynucleoside monophosphate kinase; Provisional
Probab=41.13 E-value=1.4e+02 Score=28.06 Aligned_cols=70 Identities=17% Similarity=0.206 Sum_probs=45.5
Q ss_pred cCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHH-Hc--CCCCCCcEEEEeCCH--hhHHHHHHcCCc
Q 010820 399 SSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITN-SL--GVDKPSEILFVTDVY--QEATAAKAAGLE 473 (500)
Q Consensus 399 Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~-~l--~v~~p~~~l~VGDs~--~Di~aA~~aG~~ 473 (500)
++......++++|.+|- + ..+ +-+|.+|.+.+. ++ ...++...+.|-|-. ++++..++.|..
T Consensus 113 ~~~~~~SiR~llQ~~GT----d--------~~R-~~d~~~Wvr~a~~~~~~~~~~~~~~vVVTDVRf~nEie~lre~Gg~ 179 (227)
T PHA02575 113 NNNNPWSIRRLMQTLGT----D--------IVV-NFNKMYWVKLFALKYLDKFKSDYDYFIVTDVRQDHEMELVRAMGAT 179 (227)
T ss_pred CCCCCCCHHHHHHHhcC----c--------eee-ecCcCHhHHHHHHHHHHhhhccCCCEEEeCCCChhHHHHHHHcCCE
Confidence 55555666777766641 1 112 235556665543 21 122256688899986 999999999999
Q ss_pred EEEEcCCC
Q 010820 474 VVISIRPG 481 (500)
Q Consensus 474 ~i~v~~~~ 481 (500)
.+.+.|++
T Consensus 180 iV~V~R~~ 187 (227)
T PHA02575 180 VIHVVRDT 187 (227)
T ss_pred EEEEecCC
Confidence 99999874
No 308
>PF06901 FrpC: RTX iron-regulated protein FrpC; InterPro: IPR010692 This family consists of several RTX iron-regulated FrpC proteins which appear to be found exclusively in Neisseria meningitidis. FrpC has been shown to be related to the RTX family of bacterial cytotoxins. FrpC is found in the meningococcal outer membrane. The function of this family is unknown although it is thought to be a virulence factor [].
Probab=40.61 E-value=35 Score=30.87 Aligned_cols=14 Identities=21% Similarity=0.451 Sum_probs=12.1
Q ss_pred ceEEEEecCCcccc
Q 010820 284 PRCIVLDIEGTTTP 297 (500)
Q Consensus 284 ~k~vlFD~DGTL~~ 297 (500)
=+.|-||+|||++-
T Consensus 58 E~~v~~D~~GT~m~ 71 (271)
T PF06901_consen 58 EHTVTFDFQGTKMV 71 (271)
T ss_pred eeeEEEeccceEEE
Confidence 47899999999983
No 309
>TIGR00221 nagA N-acetylglucosamine-6-phosphate deacetylase.
Probab=38.85 E-value=1.7e+02 Score=29.91 Aligned_cols=37 Identities=14% Similarity=0.056 Sum_probs=29.4
Q ss_pred ccCCCHHHHHHHHHhCCcEEEE-EcCCcHHHHHHHHhc
Q 010820 376 EVFDDVPEALEKWHSLGTKVYI-YSSGSRLAQRLIFGN 412 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v-~Tn~~~~~~~~~l~~ 412 (500)
+-.|+..+++++|+++|+.+.+ -||.+.+.....++.
T Consensus 174 PE~~~~~~~i~~l~~~gi~vs~GHs~A~~~~~~~a~~~ 211 (380)
T TIGR00221 174 PEEDQHFELIRHLKDAGIIVSAGHTNATYELAKAAFKA 211 (380)
T ss_pred CCCCChHHHHHHHHHCCeEEEeeCCCCCHHHHHHHHHc
Confidence 4458889999999999998887 788877777666543
No 310
>COG1015 DeoB Phosphopentomutase [Carbohydrate transport and metabolism]
Probab=36.91 E-value=1.5e+02 Score=30.02 Aligned_cols=87 Identities=14% Similarity=0.284 Sum_probs=56.6
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEE-----------------cCCcHHHHHHHHhccCccccccc-ccccc--cccccCCCC
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIY-----------------SSGSRLAQRLIFGNSNYGDLRKY-LSGFF--DTAVGNKRE 435 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~-----------------Tn~~~~~~~~~l~~~~~~~l~~~-f~~~~--d~~~~~KP~ 435 (500)
-+-|-.+.+|++|++.|.+++-+ +.++.+.+...++.++..+...+ |.-+. |....-+-+
T Consensus 221 a~~P~~~tvl~~L~e~g~~vi~IGKI~DI~~~~Git~~~~~~~n~~~~d~tl~~~~~~~~~~~vFtNlVdfD~~yGHRrD 300 (397)
T COG1015 221 AVKPFAPTVLDKLKEAGRPVIAIGKIADIYAGQGITEKVKAVSNMDGMDVTLEEMKTAEFNGLVFTNLVDFDSLYGHRRD 300 (397)
T ss_pred ccCCChhhHHHHHHHcCCceEEEeeHHhhhccccccccccCCCcHHHHHHHHHHHhcCCCCcEEEEeeeecccccccccc
Confidence 35566678899999998876542 44566777777777743233334 33333 434445778
Q ss_pred HHHHHHHHHHcC---------CCCCCcEEEE-eCCHhh
Q 010820 436 TPSYVEITNSLG---------VDKPSEILFV-TDVYQE 463 (500)
Q Consensus 436 p~~~~~~l~~l~---------v~~p~~~l~V-GDs~~D 463 (500)
+..|..+++.++ ++ ++++++| -|+-+|
T Consensus 301 v~gYa~aLe~FD~rL~e~~~~l~-edDlLiiTADHGnD 337 (397)
T COG1015 301 VAGYAAALEEFDRRLPELIENLR-EDDLLIITADHGND 337 (397)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcC-CCCEEEEecCCCCC
Confidence 889999888874 45 7788887 466555
No 311
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=35.15 E-value=42 Score=31.32 Aligned_cols=51 Identities=24% Similarity=0.411 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHH-HHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcC----CCCC---CCEEEEe
Q 010820 27 VKETRVLISELCR-HFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKE----RMEP---EDMYVLS 91 (500)
Q Consensus 27 ~~~~~~~l~~~~r-~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~----~l~~---~di~~vd 91 (500)
...+|++++++-+ .+-+.||....||.||+ =|+|.|+++. .|.. ++|.-+.
T Consensus 124 ~~~iR~~~v~~L~~~f~d~~L~~siGGqiSi--------------Dvfp~GwDKty~Lr~l~~~~~~~I~FfG 182 (220)
T PF03332_consen 124 KHKIREKLVEALKKEFPDFGLTFSIGGQISI--------------DVFPKGWDKTYCLRHLEDEGFDEIHFFG 182 (220)
T ss_dssp HHTHHHHHHHHHHHHTCCCSEEEEEETTTEE--------------EEEETT-SGGGGGGGTTTTT-SEEEEEE
T ss_pred hhhHHHHHHHHHHHHCCCCceEEecCCceEE--------------ccccCCccHHHHHHHHHhcccceEEEEe
Confidence 4557877776655 55556888888999986 2688888754 4554 5555554
No 312
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=34.78 E-value=49 Score=36.21 Aligned_cols=34 Identities=24% Similarity=0.338 Sum_probs=27.8
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLI 409 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~ 409 (500)
++-++++..|+-||..|+++..+|+.--+...-+
T Consensus 658 kLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ci 691 (1051)
T KOG0210|consen 658 KLQDDVKPTLELLRNAGIKIWMLTGDKLETAICI 691 (1051)
T ss_pred HHhhhhHhHHHHHhhcCcEEEEEcCcchhheeee
Confidence 5778899999999999999999998766555443
No 313
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=34.27 E-value=42 Score=22.77 Aligned_cols=17 Identities=29% Similarity=0.446 Sum_probs=14.8
Q ss_pred cceeecCCHHHHHHHHH
Q 010820 209 GIYVWGDSWINAKTQAE 225 (500)
Q Consensus 209 G~~~~g~~~~~A~~~~~ 225 (500)
|+++.|+|+++|+..+.
T Consensus 23 g~~t~G~t~eea~~~~~ 39 (48)
T PF03681_consen 23 GCFTQGDTLEEALENAK 39 (48)
T ss_dssp TCEEEESSHHHHHHHHH
T ss_pred ChhhcCCCHHHHHHHHH
Confidence 99999999999987654
No 314
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=33.67 E-value=23 Score=32.37 Aligned_cols=11 Identities=36% Similarity=0.667 Sum_probs=0.0
Q ss_pred EEEEecCCccc
Q 010820 286 CIVLDIEGTTT 296 (500)
Q Consensus 286 ~vlFD~DGTL~ 296 (500)
.++||+||||.
T Consensus 13 l~lfdvdgtLt 23 (252)
T KOG3189|consen 13 LCLFDVDGTLT 23 (252)
T ss_pred EEEEecCCccc
No 315
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=33.57 E-value=26 Score=31.11 Aligned_cols=16 Identities=31% Similarity=0.596 Sum_probs=13.1
Q ss_pred eEEEEecCCccccccc
Q 010820 285 RCIVLDIEGTTTPISF 300 (500)
Q Consensus 285 k~vlFD~DGTL~~~~~ 300 (500)
+.+++|+|+||+.++.
T Consensus 2 ~~lvlDLDeTLi~~~~ 17 (162)
T TIGR02251 2 KTLVLDLDETLVHSTF 17 (162)
T ss_pred cEEEEcCCCCcCCCCC
Confidence 4799999999996543
No 316
>PLN02334 ribulose-phosphate 3-epimerase
Probab=33.51 E-value=4e+02 Score=24.85 Aligned_cols=98 Identities=10% Similarity=-0.053 Sum_probs=57.9
Q ss_pred CCHHHHHHHHHhCCcEEEEEcCC--cHHHHHHHHhccCccccccc--ccccccccccCCCCHHHHHHHHHHcCCCCCCcE
Q 010820 379 DDVPEALEKWHSLGTKVYIYSSG--SRLAQRLIFGNSNYGDLRKY--LSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 454 (500)
Q Consensus 379 pgv~~~L~~L~~~G~~l~v~Tn~--~~~~~~~~l~~~~~~~l~~~--f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~ 454 (500)
+...+.++.+++.|..+++..|. +.+.....++.- + .+| +-.++-.....+..+..+.++.+.-...+...+
T Consensus 102 d~~~~~~~~i~~~g~~iGls~~~~t~~~~~~~~~~~~---~-~Dyi~~~~v~pg~~~~~~~~~~~~~i~~~~~~~~~~~I 177 (229)
T PLN02334 102 IHLHRLIQQIKSAGMKAGVVLNPGTPVEAVEPVVEKG---L-VDMVLVMSVEPGFGGQSFIPSMMDKVRALRKKYPELDI 177 (229)
T ss_pred hhHHHHHHHHHHCCCeEEEEECCCCCHHHHHHHHhcc---C-CCEEEEEEEecCCCccccCHHHHHHHHHHHHhCCCCcE
Confidence 45678999999999999999984 355555554330 0 222 212221111223345555555443233102245
Q ss_pred EEE-eCCHhhHHHHHHcCCcEEEEcCC
Q 010820 455 LFV-TDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 455 l~V-GDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
+.+ |=+..++....++|...+.+-+.
T Consensus 178 ~a~GGI~~e~i~~l~~aGad~vvvgsa 204 (229)
T PLN02334 178 EVDGGVGPSTIDKAAEAGANVIVAGSA 204 (229)
T ss_pred EEeCCCCHHHHHHHHHcCCCEEEEChH
Confidence 555 46678999999999999888665
No 317
>PLN02704 flavonol synthase
Probab=33.47 E-value=63 Score=32.44 Aligned_cols=36 Identities=33% Similarity=0.441 Sum_probs=28.5
Q ss_pred eeeeeeCCC-CchhHHHHHHHHHhhCCCccEEEEccccce
Q 010820 173 VVPIIENTA-YENELTDSLAKAIDAYPKATAVLVRNHGIY 211 (500)
Q Consensus 173 ~vp~~~~~~-~~~~l~~~v~~~l~~~~~~~~vll~nHG~~ 211 (500)
.||+++... ...++++.+.+++++. -.+.+.|||+=
T Consensus 42 ~iPvIDls~~~~~~~~~~l~~Ac~~~---GFf~l~nHGI~ 78 (335)
T PLN02704 42 QVPTIDLSDPDEEKLTRLIAEASKEW---GMFQIVNHGIP 78 (335)
T ss_pred CCCeEECCCccHHHHHHHHHHHHHHc---CEEEEEcCCCC
Confidence 399999853 4556788888999885 77889999984
No 318
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=33.26 E-value=34 Score=31.16 Aligned_cols=82 Identities=15% Similarity=0.141 Sum_probs=28.3
Q ss_pred cccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcE
Q 010820 375 GEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEI 454 (500)
Q Consensus 375 ~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~ 454 (500)
.+++| .+|..++++|++++++...-........+++. .+...+-..|+.+.. ..+.-.+-+.++|+. ++++
T Consensus 104 tElWP---nll~~a~~~~ip~~LvNarls~~s~~~~~~~~--~~~r~~l~~f~~i~a---qs~~da~r~~~lG~~-~~~v 174 (186)
T PF04413_consen 104 TELWP---NLLREAKRRGIPVVLVNARLSERSFRRYRRFP--FLFRPLLSRFDRILA---QSEADAERFRKLGAP-PERV 174 (186)
T ss_dssp ----H---HHHHH-----S-EEEEEE----------------HHHHHHGGG-SEEEE---SSHHHHHHHHTTT-S---SE
T ss_pred cccCH---HHHHHHhhcCCCEEEEeeeeccccchhhhhhH--HHHHHHHHhCCEEEE---CCHHHHHHHHHcCCC-cceE
Confidence 35555 78899999999999988766554444333331 111111111222111 223334566789997 9999
Q ss_pred EEEeCCHhhHH
Q 010820 455 LFVTDVYQEAT 465 (500)
Q Consensus 455 l~VGDs~~Di~ 465 (500)
...||-.-|..
T Consensus 175 ~v~GnlKfd~~ 185 (186)
T PF04413_consen 175 HVTGNLKFDQA 185 (186)
T ss_dssp EE---GGG---
T ss_pred EEeCcchhccc
Confidence 99999877753
No 319
>smart00540 LEM in nuclear membrane-associated proteins. LEM, domain in nuclear membrane-associated proteins, including lamino-associated polypeptide 2 and emerin.
Probab=31.89 E-value=35 Score=23.09 Aligned_cols=32 Identities=9% Similarity=-0.045 Sum_probs=27.5
Q ss_pred HHHHHHHHhCCcEEEEEcCCcHHHHHHHHhcc
Q 010820 382 PEALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 413 (500)
Q Consensus 382 ~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~ 413 (500)
.++.+.|++.|++.+-+|...+......|..+
T Consensus 9 ~eL~~~L~~~G~~~gPIt~sTR~vy~kkL~~~ 40 (44)
T smart00540 9 AELRAELKQYGLPPGPITDTTRKLYEKKLRKL 40 (44)
T ss_pred HHHHHHHHHcCCCCCCcCcchHHHHHHHHHHH
Confidence 47889999999999999999998888877554
No 320
>TIGR03470 HpnH hopanoid biosynthesis associated radical SAM protein HpnH. The sequences represented by this model are members of the radical SAM superfamily of enzymes (pfam04055). These enzymes utilize an iron-sulfur redox cluster and S-adenosylmethionine to carry out diverse radical mediated reactions. The members of this clade are frequently found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. The linkage between SHC and this radical SAM enzyme is strong; one is nearly always observed in the same genome where the other is found. A hopanoid biosynthesis locus was described in Zymomonas mobilis consisting of the genes HpnA-E and SHC (HpnF). Continuing past SHC are found a phosphorylase enzyme (ZMO0873, i.e. HpnG, TIGR03468) and this radical SAM enzyme (ZMO0874) which we name here HpnH. Granted, in Z. mobilis, HpnH is in a convergent orientation with respect to HpnA-G, but one gene beyond HpnH
Probab=31.74 E-value=3e+02 Score=27.29 Aligned_cols=27 Identities=11% Similarity=0.175 Sum_probs=24.2
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCcH
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGSR 403 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~~ 403 (500)
+.|++.++++.++++|..+.++||+..
T Consensus 85 L~pdl~eiv~~~~~~g~~v~l~TNG~l 111 (318)
T TIGR03470 85 LHPEIDEIVRGLVARKKFVYLCTNALL 111 (318)
T ss_pred ccccHHHHHHHHHHcCCeEEEecCcee
Confidence 558899999999999999999999974
No 321
>PLN02997 flavonol synthase
Probab=31.33 E-value=58 Score=32.59 Aligned_cols=36 Identities=31% Similarity=0.439 Sum_probs=29.0
Q ss_pred eeeeeeCCC-CchhHHHHHHHHHhhCCCccEEEEccccce
Q 010820 173 VVPIIENTA-YENELTDSLAKAIDAYPKATAVLVRNHGIY 211 (500)
Q Consensus 173 ~vp~~~~~~-~~~~l~~~v~~~l~~~~~~~~vll~nHG~~ 211 (500)
.||+++..+ ...+.++.|.+++++. -.+.+.|||+=
T Consensus 32 ~IPvIDls~~~~~~~~~~l~~Ac~~~---GFF~v~nHGI~ 68 (325)
T PLN02997 32 DVPVVDLSVSDEDFLVREVVKASEEW---GVFQVVNHGIP 68 (325)
T ss_pred CCCeEECCCCCHHHHHHHHHHHHHHC---CEEEEECCCCC
Confidence 499999854 4456788899999985 78899999973
No 322
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=30.90 E-value=4.6e+02 Score=24.94 Aligned_cols=91 Identities=13% Similarity=0.124 Sum_probs=56.8
Q ss_pred HHHHHHhC-CcEEEEEcCCcH---HHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeC
Q 010820 384 ALEKWHSL-GTKVYIYSSGSR---LAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTD 459 (500)
Q Consensus 384 ~L~~L~~~-G~~l~v~Tn~~~---~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGD 459 (500)
+|++..++ ++.+-++++|.. +........+ +..+..-|.-+ -+-...-|-|.--..+++..++ .|+.|||
T Consensus 22 ~lDErAdRedI~vrv~gsGaKm~pe~~~~~~~~~-~~~~~pDf~i~-isPN~a~PGP~~ARE~l~~~~i----P~IvI~D 95 (277)
T PRK00994 22 LLDERADREDIDVRVVGSGAKMGPEEVEEVVKKM-LEEWKPDFVIV-ISPNPAAPGPKKAREILKAAGI----PCIVIGD 95 (277)
T ss_pred HHHhhhcccCceEEEeccCCCCCHHHHHHHHHHH-HHhhCCCEEEE-ECCCCCCCCchHHHHHHHhcCC----CEEEEcC
Confidence 34455444 899999999763 3333222222 00111222211 2234456777777888888777 5999999
Q ss_pred CH--hhHHHHHHcCCcEEEEcCC
Q 010820 460 VY--QEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 460 s~--~Di~aA~~aG~~~i~v~~~ 480 (500)
.+ .+-+.-...|+.-|.+..+
T Consensus 96 ~p~~K~~d~l~~~g~GYIivk~D 118 (277)
T PRK00994 96 APGKKVKDAMEEQGLGYIIVKAD 118 (277)
T ss_pred CCccchHHHHHhcCCcEEEEecC
Confidence 98 5668888899999888754
No 323
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=30.83 E-value=56 Score=32.64 Aligned_cols=29 Identities=24% Similarity=0.626 Sum_probs=25.6
Q ss_pred ccCCCHHHHHHHHHhCCcEEEEEcCCcHH
Q 010820 376 EVFDDVPEALEKWHSLGTKVYIYSSGSRL 404 (500)
Q Consensus 376 ~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~ 404 (500)
.++|.+.++++.++++|+.+.|.||+...
T Consensus 142 lL~p~l~eli~~~k~~Gi~~~L~TNG~~~ 170 (322)
T PRK13762 142 TLYPYLPELIEEFHKRGFTTFLVTNGTRP 170 (322)
T ss_pred cchhhHHHHHHHHHHcCCCEEEECCCCCH
Confidence 35688999999999999999999999753
No 324
>TIGR03365 Bsubt_queE 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. This uncharacterized enzyme, designated QueE, participates in the biosynthesis, from GTP, of 7-cyano-7-deazaguanosine, also called preQ0 because in many species it is a precursor of queuosine. In most Archaea, it is instead the precursor of a different tRNA modified base, archaeosine.
Probab=30.49 E-value=43 Score=31.79 Aligned_cols=28 Identities=14% Similarity=0.143 Sum_probs=24.7
Q ss_pred CCCHHHHHHHHHhCCcEEEEEcCCcHHH
Q 010820 378 FDDVPEALEKWHSLGTKVYIYSSGSRLA 405 (500)
Q Consensus 378 ~pgv~~~L~~L~~~G~~l~v~Tn~~~~~ 405 (500)
.++..++++.|++.|+++.+.||+....
T Consensus 86 ~~~l~~li~~l~~~g~~v~leTNGtl~~ 113 (238)
T TIGR03365 86 QKPLGELIDLGKAKGYRFALETQGSVWQ 113 (238)
T ss_pred hHhHHHHHHHHHHCCCCEEEECCCCCcH
Confidence 4678899999999999999999998643
No 325
>PRK06552 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=29.69 E-value=3.4e+02 Score=25.23 Aligned_cols=86 Identities=20% Similarity=0.184 Sum_probs=54.9
Q ss_pred HHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeCC--
Q 010820 383 EALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTDV-- 460 (500)
Q Consensus 383 ~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGDs-- 460 (500)
++++.|.++++ +.|+.+.+.+......+.+--+|+.- ++...+..-..+.+..+.++++-. |+ +.||-.
T Consensus 5 ~~~~~l~~~~v-i~vir~~~~~~a~~~~~al~~~Gi~~-----iEit~~~~~a~~~i~~l~~~~~~~-p~--~~vGaGTV 75 (213)
T PRK06552 5 EILTKLKANGV-VAVVRGESKEEALKISLAVIKGGIKA-----IEVTYTNPFASEVIKELVELYKDD-PE--VLIGAGTV 75 (213)
T ss_pred HHHHHHHHCCE-EEEEECCCHHHHHHHHHHHHHCCCCE-----EEEECCCccHHHHHHHHHHHcCCC-CC--eEEeeeeC
Confidence 46778887766 88888888888888876663223221 122222222445666666666543 33 557654
Q ss_pred --HhhHHHHHHcCCcEEEE
Q 010820 461 --YQEATAAKAAGLEVVIS 477 (500)
Q Consensus 461 --~~Di~aA~~aG~~~i~v 477 (500)
..+++.|.++|.+++.-
T Consensus 76 ~~~~~~~~a~~aGA~Fivs 94 (213)
T PRK06552 76 LDAVTARLAILAGAQFIVS 94 (213)
T ss_pred CCHHHHHHHHHcCCCEEEC
Confidence 37899999999999874
No 326
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=29.27 E-value=73 Score=36.43 Aligned_cols=17 Identities=41% Similarity=0.659 Sum_probs=14.4
Q ss_pred CceEEEEecCCcccccc
Q 010820 283 FPRCIVLDIEGTTTPIS 299 (500)
Q Consensus 283 ~~k~vlFD~DGTL~~~~ 299 (500)
+.++|+||+||||++..
T Consensus 595 ~~rlI~LDyDGTLlp~~ 611 (854)
T PLN02205 595 TTRAILLDYDGTLMPQA 611 (854)
T ss_pred cCeEEEEecCCcccCCc
Confidence 46899999999999554
No 327
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=28.80 E-value=66 Score=30.51 Aligned_cols=36 Identities=8% Similarity=-0.024 Sum_probs=30.8
Q ss_pred CCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccC
Q 010820 379 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN 414 (500)
Q Consensus 379 pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~ 414 (500)
|.+.+++++++++|.+++++|+.+......+++.++
T Consensus 24 ~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~ 59 (249)
T TIGR01485 24 LRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKP 59 (249)
T ss_pred HHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCC
Confidence 445688999999999999999999999999887774
No 328
>PLN03176 flavanone-3-hydroxylase; Provisional
Probab=28.45 E-value=1.1e+02 Score=25.57 Aligned_cols=36 Identities=17% Similarity=0.433 Sum_probs=25.9
Q ss_pred eeeeeCCC---C---chhHHHHHHHHHhhCCCccEEEEcccccee
Q 010820 174 VPIIENTA---Y---ENELTDSLAKAIDAYPKATAVLVRNHGIYV 212 (500)
Q Consensus 174 vp~~~~~~---~---~~~l~~~v~~~l~~~~~~~~vll~nHG~~~ 212 (500)
||+++... + ..+.++.+.+++.+. -.+.+.|||+-.
T Consensus 38 iPvIDls~~~~~~~~~~~~~~~L~~A~~~~---GFf~l~nhGi~~ 79 (120)
T PLN03176 38 IPVISIAGIDDGGEKRAEICNKIVEACEEW---GVFQIVDHGVDA 79 (120)
T ss_pred CCeEECccccCCchHHHHHHHHHHHHHHHC---CEEEEECCCCCH
Confidence 88888742 1 124677788888874 788999999763
No 329
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=27.98 E-value=90 Score=27.97 Aligned_cols=88 Identities=17% Similarity=0.137 Sum_probs=46.0
Q ss_pred ccCCCHHHHHHHH---HhCCcEEEEEcCCcHHH-HHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHc---CC
Q 010820 376 EVFDDVPEALEKW---HSLGTKVYIYSSGSRLA-QRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSL---GV 448 (500)
Q Consensus 376 ~~~pgv~~~L~~L---~~~G~~l~v~Tn~~~~~-~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l---~v 448 (500)
.......++|+.| +..+-++++++..+.-. ...+.+.++. ++..+ .+ -+++-+..+++++ |+
T Consensus 58 ~I~~s~~Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~-~i~~~---~~-------~~~~e~~~~i~~~~~~G~ 126 (176)
T PF06506_consen 58 EIPISGFDILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGV-DIKIY---PY-------DSEEEIEAAIKQAKAEGV 126 (176)
T ss_dssp EE---HHHHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT--EEEEE---EE-------SSHHHHHHHHHHHHHTT-
T ss_pred EECCCHhHHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCC-ceEEE---EE-------CCHHHHHHHHHHHHHcCC
Confidence 3444444455544 55578999988765433 2222222210 11111 11 1344445555554 55
Q ss_pred CCCCcEEEEeCCHhhHHHHHHcCCcEEEEcCC
Q 010820 449 DKPSEILFVTDVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 449 ~~p~~~l~VGDs~~Di~aA~~aG~~~i~v~~~ 480 (500)
+ ++||+... ...|++.|++++.+..+
T Consensus 127 ~-----viVGg~~~-~~~A~~~gl~~v~i~sg 152 (176)
T PF06506_consen 127 D-----VIVGGGVV-CRLARKLGLPGVLIESG 152 (176)
T ss_dssp ------EEEESHHH-HHHHHHTTSEEEESS--
T ss_pred c-----EEECCHHH-HHHHHHcCCcEEEEEec
Confidence 5 88999975 78899999999988654
No 330
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=27.48 E-value=4.9e+02 Score=24.64 Aligned_cols=95 Identities=19% Similarity=0.108 Sum_probs=53.8
Q ss_pred CCHHHHHHHHHhCCcEEEEEcCCc--HHHHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHcCCCCCCcEEE
Q 010820 379 DDVPEALEKWHSLGTKVYIYSSGS--RLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILF 456 (500)
Q Consensus 379 pgv~~~L~~L~~~G~~l~v~Tn~~--~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~ 456 (500)
+...++++.+++.|.+.+++-|.. .+..+..++.. ..++-.........+=.+.+..++.+.-... ++..+.
T Consensus 116 ~~~~~~~~~~~~~Gl~~~~~v~p~T~~e~l~~~~~~~-----~~~l~msv~~~~g~~~~~~~~~~i~~lr~~~-~~~~i~ 189 (244)
T PRK13125 116 DDLEKYVEIIKNKGLKPVFFTSPKFPDLLIHRLSKLS-----PLFIYYGLRPATGVPLPVSVERNIKRVRNLV-GNKYLV 189 (244)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhC-----CCEEEEEeCCCCCCCchHHHHHHHHHHHHhc-CCCCEE
Confidence 467789999999999998887763 45556666444 1221001111111122233333332222232 233466
Q ss_pred EeC---CHhhHHHHHHcCCcEEEEcC
Q 010820 457 VTD---VYQEATAAKAAGLEVVISIR 479 (500)
Q Consensus 457 VGD---s~~Di~aA~~aG~~~i~v~~ 479 (500)
||= +..++..+.++|...+.+-.
T Consensus 190 v~gGI~~~e~i~~~~~~gaD~vvvGS 215 (244)
T PRK13125 190 VGFGLDSPEDARDALSAGADGVVVGT 215 (244)
T ss_pred EeCCcCCHHHHHHHHHcCCCEEEECH
Confidence 764 44788888899999888754
No 331
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=27.42 E-value=2e+02 Score=30.99 Aligned_cols=86 Identities=15% Similarity=0.102 Sum_probs=48.0
Q ss_pred HHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccc-ccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeC
Q 010820 381 VPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY-LSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTD 459 (500)
Q Consensus 381 v~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~-f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGD 459 (500)
+..+|...++.+-+++|++-.....-...+..+ .++ +..+. ....-+...-.+-+++-|.+ ++|||
T Consensus 86 il~al~~a~~~~~~ia~vg~~~~~~~~~~~~~l-----l~~~i~~~~---~~~~~e~~~~~~~l~~~G~~-----~viG~ 152 (526)
T TIGR02329 86 VMQALARARRIASSIGVVTHQDTPPALRRFQAA-----FNLDIVQRS---YVTEEDARSCVNDLRARGIG-----AVVGA 152 (526)
T ss_pred HHHHHHHHHhcCCcEEEEecCcccHHHHHHHHH-----hCCceEEEE---ecCHHHHHHHHHHHHHCCCC-----EEECC
Confidence 555566666667789998875543322222111 222 11111 11111222233334445665 88999
Q ss_pred CHhhHHHHHHcCCcEEEEcCC
Q 010820 460 VYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 460 s~~Di~aA~~aG~~~i~v~~~ 480 (500)
... ...|+++|+..+++..+
T Consensus 153 ~~~-~~~A~~~gl~~ili~s~ 172 (526)
T TIGR02329 153 GLI-TDLAEQAGLHGVFLYSA 172 (526)
T ss_pred hHH-HHHHHHcCCceEEEecH
Confidence 965 67899999999999653
No 332
>PTZ00174 phosphomannomutase; Provisional
Probab=26.97 E-value=63 Score=30.71 Aligned_cols=41 Identities=15% Similarity=-0.067 Sum_probs=33.2
Q ss_pred CCCHHHHHHHHHHcCCCCCCcEEEEeC----CHhhHHHHHHcCCcEEEEc
Q 010820 433 KRETPSYVEITNSLGVDKPSEILFVTD----VYQEATAAKAAGLEVVISI 478 (500)
Q Consensus 433 KP~p~~~~~~l~~l~v~~p~~~l~VGD----s~~Di~aA~~aG~~~i~v~ 478 (500)
--|......++++ +++++.||| +.||+++-+.++...+.|.
T Consensus 187 vsKg~al~~L~~~-----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~ 231 (247)
T PTZ00174 187 WDKTYCLRHLEND-----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK 231 (247)
T ss_pred CcHHHHHHHHHhh-----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC
Confidence 3366677777777 369999999 8999999998888777776
No 333
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=26.84 E-value=52 Score=34.49 Aligned_cols=19 Identities=16% Similarity=-0.085 Sum_probs=12.9
Q ss_pred CCCceEEEEecCCcccccc
Q 010820 281 GLFPRCIVLDIEGTTTPIS 299 (500)
Q Consensus 281 ~~~~k~vlFD~DGTL~~~~ 299 (500)
+.++++|-||||-||..++
T Consensus 9 l~~i~~iGFDmDyTLa~Y~ 27 (448)
T PF05761_consen 9 LKDIDVIGFDMDYTLARYK 27 (448)
T ss_dssp CCC--EEEE-TBTTTBEE-
T ss_pred cccCCEEEECcccchhhcC
Confidence 4679999999999999655
No 334
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=26.75 E-value=73 Score=32.01 Aligned_cols=36 Identities=25% Similarity=0.401 Sum_probs=28.8
Q ss_pred eeeeeeCCC-CchhHHHHHHHHHhhCCCccEEEEccccce
Q 010820 173 VVPIIENTA-YENELTDSLAKAIDAYPKATAVLVRNHGIY 211 (500)
Q Consensus 173 ~vp~~~~~~-~~~~l~~~v~~~l~~~~~~~~vll~nHG~~ 211 (500)
.||+++..+ ...++++.|.+++++. -.+.+.|||+=
T Consensus 37 ~iPvIDls~~~~~~~~~~l~~Ac~~~---GFf~v~nHGI~ 73 (337)
T PLN02639 37 NVPVIDLGSPDRAQVVQQIGDACRRY---GFFQVINHGVS 73 (337)
T ss_pred CCCeEECCCccHHHHHHHHHHHHHhC---CEEEEEcCCCC
Confidence 399998854 4567888999999985 77889999983
No 335
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=26.72 E-value=1e+02 Score=28.81 Aligned_cols=36 Identities=11% Similarity=0.062 Sum_probs=27.2
Q ss_pred CCC-HHHHHHHHHhCCcEEEEEcCCc--HHHHHHHHhcc
Q 010820 378 FDD-VPEALEKWHSLGTKVYIYSSGS--RLAQRLIFGNS 413 (500)
Q Consensus 378 ~pg-v~~~L~~L~~~G~~l~v~Tn~~--~~~~~~~l~~~ 413 (500)
.++ +.++++.+|++|+.+++.||+. .+....++...
T Consensus 52 q~~fl~~l~~~~k~~gi~~~leTnG~~~~~~~~~l~~~~ 90 (213)
T PRK10076 52 QAEFATRFLQRLRLWGVSCAIETAGDAPASKLLPLAKLC 90 (213)
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHhc
Confidence 344 5799999999999999999995 45555555444
No 336
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=26.72 E-value=79 Score=27.57 Aligned_cols=25 Identities=16% Similarity=0.291 Sum_probs=21.8
Q ss_pred CCHHHHHHHHHhCCcEEEEEcCCcH
Q 010820 379 DDVPEALEKWHSLGTKVYIYSSGSR 403 (500)
Q Consensus 379 pgv~~~L~~L~~~G~~l~v~Tn~~~ 403 (500)
+.+.++++.++++|+++.+.||+..
T Consensus 75 ~~l~~ll~~lk~~Gl~i~l~Tg~~~ 99 (147)
T TIGR02826 75 EALLSLLKIFKEKGLKTCLYTGLEP 99 (147)
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCC
Confidence 4577999999999999999999754
No 337
>smart00052 EAL Putative diguanylate phosphodiesterase. Putative diguanylate phosphodiesterase, present in a variety of bacteria.
Probab=26.60 E-value=3.6e+02 Score=24.72 Aligned_cols=90 Identities=10% Similarity=0.194 Sum_probs=48.6
Q ss_pred HHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccc--ccccc-cccccCCCCHHH---HHHHHHHcCCCCCCcE
Q 010820 381 VPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY--LSGFF-DTAVGNKRETPS---YVEITNSLGVDKPSEI 454 (500)
Q Consensus 381 v~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~--f~~~~-d~~~~~KP~p~~---~~~~l~~l~v~~p~~~ 454 (500)
+.+.++.|++.|+++++--=+........+..++ .++ ++..+ ......+-...+ +...++.+++ .+
T Consensus 135 ~~~~i~~l~~~G~~ialddfg~~~~~~~~l~~l~----~d~iKld~~~~~~~~~~~~~~~~l~~l~~~~~~~~~----~v 206 (241)
T smart00052 135 AVATLQRLRELGVRIALDDFGTGYSSLSYLKRLP----VDLLKIDKSFVRDLQTDPEDEAIVQSIIELAQKLGL----QV 206 (241)
T ss_pred HHHHHHHHHHCCCEEEEeCCCCcHHHHHHHHhCC----CCeEEECHHHHhhhccChhHHHHHHHHHHHHHHCCC----eE
Confidence 3488999999999998843222222222333331 122 33332 111111112223 3344444454 35
Q ss_pred EEEe-CCHhhHHHHHHcCCcEEEEc
Q 010820 455 LFVT-DVYQEATAAKAAGLEVVISI 478 (500)
Q Consensus 455 l~VG-Ds~~Di~aA~~aG~~~i~v~ 478 (500)
+.=| ++..+.+.+++.|+..+.-.
T Consensus 207 ia~gVe~~~~~~~l~~~Gi~~~QG~ 231 (241)
T smart00052 207 VAEGVETPEQLDLLRSLGCDYGQGY 231 (241)
T ss_pred EEecCCCHHHHHHHHHcCCCEEeec
Confidence 5445 77899999999999876543
No 338
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=26.21 E-value=1.7e+02 Score=33.20 Aligned_cols=44 Identities=16% Similarity=0.263 Sum_probs=33.2
Q ss_pred CCCCHHHHHHHHHHcCCCCCCcEEEEeCCH-hhHHHHHHcCCcEEEEc
Q 010820 432 NKRETPSYVEITNSLGVDKPSEILFVTDVY-QEATAAKAAGLEVVISI 478 (500)
Q Consensus 432 ~KP~p~~~~~~l~~l~v~~p~~~l~VGDs~-~Di~aA~~aG~~~i~v~ 478 (500)
.||+...-...++++|++ -+++=||+. .--..|+..|+..|+..
T Consensus 724 vr~~a~~av~~Lk~~Gi~---v~mLTGDn~~aA~svA~~VGi~~V~ae 768 (951)
T KOG0207|consen 724 VRPDAALAVAELKSMGIK---VVMLTGDNDAAARSVAQQVGIDNVYAE 768 (951)
T ss_pred cchhHHHHHHHHHhcCce---EEEEcCCCHHHHHHHHHhhCcceEEec
Confidence 477777777788888876 666679998 56667888998777664
No 339
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=25.99 E-value=85 Score=34.65 Aligned_cols=36 Identities=14% Similarity=0.023 Sum_probs=31.7
Q ss_pred CCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccC
Q 010820 379 DDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSN 414 (500)
Q Consensus 379 pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~ 414 (500)
+...++|++|+++|++++++|+.....+...++.++
T Consensus 436 ~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lg 471 (694)
T PRK14502 436 STALDALRLLKDKELPLVFCSAKTMGEQDLYRNELG 471 (694)
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcC
Confidence 446789999999999999999999998888888874
No 340
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=25.83 E-value=1.1e+02 Score=30.37 Aligned_cols=87 Identities=11% Similarity=0.096 Sum_probs=52.7
Q ss_pred cCCCHHHHHHHHHhC----CcEEEEEcCCcHHHHHHHHhccCcccccccccccc--cccccCCCCHHHHHHHHHHcCCCC
Q 010820 377 VFDDVPEALEKWHSL----GTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFF--DTAVGNKRETPSYVEITNSLGVDK 450 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~----G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~--d~~~~~KP~p~~~~~~l~~l~v~~ 450 (500)
+.|++.++|+.|.+. .++...+||+.-......-+.+ ...+..-+ +.++- ....|.... .+.
T Consensus 52 ~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~l-----S~~Lgv~Vs~dqviq---SHsP~r~l~-~~~--- 119 (389)
T KOG1618|consen 52 PIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQEL-----SALLGVEVSADQVIQ---SHSPFRLLV-EYH--- 119 (389)
T ss_pred CCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHH-----HHhhCCccCHHHHHh---hcChHHHHh-hhh---
Confidence 889999999999888 7899999998744443333222 22222222 11111 112333333 332
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCcEEE
Q 010820 451 PSEILFVTDVYQEATAAKAAGLEVVI 476 (500)
Q Consensus 451 p~~~l~VGDs~~Di~aA~~aG~~~i~ 476 (500)
-++++.+|+.. --+.|...|.+.|.
T Consensus 120 ~k~vLv~G~~~-vr~vAegyGFk~Vv 144 (389)
T KOG1618|consen 120 YKRVLVVGQGS-VREVAEGYGFKNVV 144 (389)
T ss_pred hceEEEecCCc-HHHHhhccCcccee
Confidence 56999999654 34567888888765
No 341
>PRK08649 inosine 5-monophosphate dehydrogenase; Validated
Probab=25.40 E-value=7e+02 Score=25.44 Aligned_cols=91 Identities=16% Similarity=0.196 Sum_probs=53.3
Q ss_pred HHHHHHHHHhCCcEEEEEcCC--cHHHHHHHHhccCccccccc-ccccc-ccc-ccCCCCHHHHHHHHHHcCCCCCCcEE
Q 010820 381 VPEALEKWHSLGTKVYIYSSG--SRLAQRLIFGNSNYGDLRKY-LSGFF-DTA-VGNKRETPSYVEITNSLGVDKPSEIL 455 (500)
Q Consensus 381 v~~~L~~L~~~G~~l~v~Tn~--~~~~~~~~l~~~~~~~l~~~-f~~~~-d~~-~~~KP~p~~~~~~l~~l~v~~p~~~l 455 (500)
+.+.++.+++.+..+.+-.+. ..+..+.+. ..+ ..-. ++... +.. .....++..+.+.+++.+++ +
T Consensus 120 ~~~iv~~~~~~~V~v~vr~~~~~~~e~a~~l~-eaG---vd~I~vhgrt~~~~h~~~~~~~~~i~~~ik~~~ip-----V 190 (368)
T PRK08649 120 ITERIAEIRDAGVIVAVSLSPQRAQELAPTVV-EAG---VDLFVIQGTVVSAEHVSKEGEPLNLKEFIYELDVP-----V 190 (368)
T ss_pred HHHHHHHHHhCeEEEEEecCCcCHHHHHHHHH-HCC---CCEEEEeccchhhhccCCcCCHHHHHHHHHHCCCC-----E
Confidence 467888888877666553332 233333333 332 1111 11111 211 22234678888888888775 5
Q ss_pred EEeCC--HhhHHHHHHcCCcEEEEcCC
Q 010820 456 FVTDV--YQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 456 ~VGDs--~~Di~aA~~aG~~~i~v~~~ 480 (500)
++||- ..+...+.++|+..|.+.++
T Consensus 191 IaG~V~t~e~A~~l~~aGAD~V~VG~G 217 (368)
T PRK08649 191 IVGGCVTYTTALHLMRTGAAGVLVGIG 217 (368)
T ss_pred EEeCCCCHHHHHHHHHcCCCEEEECCC
Confidence 55664 36788888899999988655
No 342
>cd00956 Transaldolase_FSA Transaldolase-like fructose-6-phosphate aldolases (FSA) found in bacteria and archaea, which are member of the MipB/TalC subfamily of class I aldolases. FSA catalyze an aldol cleavage of fructose 6-phosphate and do not utilize fructose, fructose 1-phosphate, fructose 1,6-phosphate, or dihydroxyacetone phosphate. The enzymes belong to the transaldolase family that serves in transfer reactions in the pentose phosphate cycle, and are more distantly related to fructose 1,6-bisphosphate aldolase.
Probab=25.23 E-value=4.7e+02 Score=24.26 Aligned_cols=102 Identities=19% Similarity=0.124 Sum_probs=58.0
Q ss_pred CcccccCCCHHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccc-cccCCCCHHHH---HHHHHHcC
Q 010820 372 ELEGEVFDDVPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDT-AVGNKRETPSY---VEITNSLG 447 (500)
Q Consensus 372 ~~~~~~~pgv~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~-~~~~KP~p~~~---~~~l~~l~ 447 (500)
..+.+....-.++++.|++.|+++.+-+=-+........ ..| ..|+..++.- ...+.+--..+ .+++++.+
T Consensus 81 ~iKIP~T~~gl~ai~~L~~~gi~v~~T~V~s~~Qa~~Aa-~AG----A~yvsP~vgR~~~~g~dg~~~i~~i~~~~~~~~ 155 (211)
T cd00956 81 VVKIPVTEDGLKAIKKLSEEGIKTNVTAIFSAAQALLAA-KAG----ATYVSPFVGRIDDLGGDGMELIREIRTIFDNYG 155 (211)
T ss_pred EEEEcCcHhHHHHHHHHHHcCCceeeEEecCHHHHHHHH-HcC----CCEEEEecChHhhcCCCHHHHHHHHHHHHHHcC
Confidence 344566667788999999999987754433333333333 332 3444444311 00112222333 34445555
Q ss_pred CCCCCcEEEEe-CCHhhHHHHHHcCCcEEEEcCC
Q 010820 448 VDKPSEILFVT-DVYQEATAAKAAGLEVVISIRP 480 (500)
Q Consensus 448 v~~p~~~l~VG-Ds~~Di~aA~~aG~~~i~v~~~ 480 (500)
+ +-+++.-| =++.++..|..+|++.+-+...
T Consensus 156 ~--~tkil~As~r~~~ei~~a~~~Gad~vTv~~~ 187 (211)
T cd00956 156 F--DTKILAASIRNPQHVIEAALAGADAITLPPD 187 (211)
T ss_pred C--CceEEecccCCHHHHHHHHHcCCCEEEeCHH
Confidence 4 33445444 3458999999999999988643
No 343
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=23.55 E-value=2.6e+02 Score=30.22 Aligned_cols=85 Identities=12% Similarity=0.140 Sum_probs=48.6
Q ss_pred HHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccc-ccccccccccCCCCHHHHHHHHHHcCCCCCCcEEEEeC
Q 010820 381 VPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY-LSGFFDTAVGNKRETPSYVEITNSLGVDKPSEILFVTD 459 (500)
Q Consensus 381 v~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~-f~~~~d~~~~~KP~p~~~~~~l~~l~v~~p~~~l~VGD 459 (500)
+..+|...++.+-+++|++-.....-...+..+ .++ +..+. ....-+...-.+-+++.|++ ++|||
T Consensus 96 il~al~~a~~~~~~iavv~~~~~~~~~~~~~~~-----l~~~i~~~~---~~~~~e~~~~v~~lk~~G~~-----~vvG~ 162 (538)
T PRK15424 96 VMQALARARKLTSSIGVVTYQETIPALVAFQKT-----FNLRIEQRS---YVTEEDARGQINELKANGIE-----AVVGA 162 (538)
T ss_pred HHHHHHHHHhcCCcEEEEecCcccHHHHHHHHH-----hCCceEEEE---ecCHHHHHHHHHHHHHCCCC-----EEEcC
Confidence 555666667767789999875543322222221 222 11111 11111223333444555666 88999
Q ss_pred CHhhHHHHHHcCCcEEEEcC
Q 010820 460 VYQEATAAKAAGLEVVISIR 479 (500)
Q Consensus 460 s~~Di~aA~~aG~~~i~v~~ 479 (500)
... +..|.++|+..+++..
T Consensus 163 ~~~-~~~A~~~g~~g~~~~s 181 (538)
T PRK15424 163 GLI-TDLAEEAGMTGIFIYS 181 (538)
T ss_pred chH-HHHHHHhCCceEEecC
Confidence 776 7899999999999864
No 344
>PLN02485 oxidoreductase
Probab=23.31 E-value=1e+02 Score=30.90 Aligned_cols=35 Identities=23% Similarity=0.247 Sum_probs=23.6
Q ss_pred hHHHHHHHHHhhCCCccEEEEccccceeecCCHHHHHHHH
Q 010820 185 ELTDSLAKAIDAYPKATAVLVRNHGIYVWGDSWINAKTQA 224 (500)
Q Consensus 185 ~l~~~v~~~l~~~~~~~~vll~nHG~~~~g~~~~~A~~~~ 224 (500)
++++.|.+++++. -.+.+.|||+= -+.+.+++..+
T Consensus 33 ~~~~~l~~Ac~~~---GFf~l~nHGi~--~~l~~~~~~~~ 67 (329)
T PLN02485 33 EVVRQLDKACRDA---GFFYVKGHGIS--DSLIKKVREVT 67 (329)
T ss_pred HHHHHHHHHHHHC---CEEEEECCCCC--HHHHHHHHHHH
Confidence 4677888888875 78899999972 22344444433
No 345
>KOG1679 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=23.29 E-value=97 Score=28.79 Aligned_cols=33 Identities=21% Similarity=0.351 Sum_probs=25.2
Q ss_pred HHHHHhhCCCccEEEEccc--cceeecCCHHHHHH
Q 010820 190 LAKAIDAYPKATAVLVRNH--GIYVWGDSWINAKT 222 (500)
Q Consensus 190 v~~~l~~~~~~~~vll~nH--G~~~~g~~~~~A~~ 222 (500)
+.+.|+..+..++|+++.- |+||.|.|+.|=-.
T Consensus 66 ~l~~lk~D~~~RvvilrS~vpgvFCaGADLKER~~ 100 (291)
T KOG1679|consen 66 VLDELKYDNKVRVVILRSLVPGVFCAGADLKERKT 100 (291)
T ss_pred HHHHHhhCCceeEEEEecCCCceeecCcchHhhhc
Confidence 3444554567899999876 99999999988653
No 346
>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional
Probab=22.77 E-value=2.9e+02 Score=28.03 Aligned_cols=26 Identities=23% Similarity=0.313 Sum_probs=23.3
Q ss_pred cCCCHHHHHHHHHhCCcEEEEEcCCc
Q 010820 377 VFDDVPEALEKWHSLGTKVYIYSSGS 402 (500)
Q Consensus 377 ~~pgv~~~L~~L~~~G~~l~v~Tn~~ 402 (500)
+.|+..++++.+++.|+.+.+.||+.
T Consensus 75 l~~~~~~il~~~~~~g~~~~i~TNG~ 100 (378)
T PRK05301 75 LRKDLEELVAHARELGLYTNLITSGV 100 (378)
T ss_pred CchhHHHHHHHHHHcCCcEEEECCCc
Confidence 45788899999999999999999986
No 347
>COG2019 AdkA Archaeal adenylate kinase [Nucleotide transport and metabolism]
Probab=22.70 E-value=58 Score=29.20 Aligned_cols=90 Identities=12% Similarity=0.109 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccCCceeEEeCCCCCCCCccEEEEecCCCCcCCCCCCCEEEEeCCCCcccCCCCCC-C
Q 010820 27 VKETRVLISELCRHFYTLGWVSGTGGSITIKVHDDSIPKPQQLILMSPSGVQKERMEPEDMYVLSGNGTTLSSPSPKP-Y 105 (500)
Q Consensus 27 ~~~~~~~l~~~~r~l~~~gl~~~~~GniS~R~~~~~~~~~~~~~~itpsg~~~~~l~~~di~~vd~~g~~~~g~~~~p-~ 105 (500)
.+++++-...+++++.+.+.-.-..+|-|+|.|.+ ++-..|+ +-++.+.|+-|+++..|.+.+-....+- .
T Consensus 61 ~e~Q~~lq~~Aa~rI~~~~~~iivDtH~~IkTP~G-------ylpgLP~-~Vl~~l~pd~ivllEaDp~~Il~RR~~D~~ 132 (189)
T COG2019 61 LENQRELQAEAAKRIAEMALEIIVDTHATIKTPAG-------YLPGLPS-WVLEELNPDVIVLLEADPEEILERRLRDSR 132 (189)
T ss_pred HHHHHHHHHHHHHHHHHhhhceEEeccceecCCCc-------cCCCCcH-HHHHhcCCCEEEEEeCCHHHHHHHHhcccc
Confidence 44556666788888888877555678999999884 6655554 4478999999999988765543221111 0
Q ss_pred CCCCCCCCCChHHHHHHHh
Q 010820 106 PHKPPKCSDCAPLFMKAYE 124 (500)
Q Consensus 106 ~~~p~~~S~e~~~H~~iy~ 124 (500)
-.++....-|+..|+..-|
T Consensus 133 r~Rd~es~e~i~eHqe~nR 151 (189)
T COG2019 133 RDRDVESVEEIREHQEMNR 151 (189)
T ss_pred cccccccHHHHHHHHHHHH
Confidence 0112222346778887744
No 348
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=22.33 E-value=9.2e+02 Score=26.28 Aligned_cols=98 Identities=14% Similarity=0.159 Sum_probs=59.5
Q ss_pred ccCCCHHHHHHHH---HhCCcEEEEEcCCcHH------HHHHHHhccCcccccccccccccccccCCCCHHHHHHHHHHc
Q 010820 376 EVFDDVPEALEKW---HSLGTKVYIYSSGSRL------AQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETPSYVEITNSL 446 (500)
Q Consensus 376 ~~~pgv~~~L~~L---~~~G~~l~v~Tn~~~~------~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~~~~~~l~~l 446 (500)
..++++.++.+++ .+++-++.|++..+.+ .....++++|.....-|+-..+ ..++-.+++.++++.+.
T Consensus 50 ~~l~~m~~a~~ri~~ai~~~e~I~I~gDyD~DGitstail~~~L~~~g~~~~~~~IP~R~--~eGYGl~~~~i~~~~~~- 126 (575)
T PRK11070 50 QQLSGIEKAVELLYNALREGTRIIVVGDFDADGATSTALSVLALRSLGCSNVDYLVPNRF--EDGYGLSPEVVDQAHAR- 126 (575)
T ss_pred HHhhCHHHHHHHHHHHHHCCCEEEEEEecCccHHHHHHHHHHHHHHcCCCceEEEeCCCC--cCCCCCCHHHHHHHHhc-
Confidence 3457777777776 3468899999886543 2344455553211111222222 22345678888887653
Q ss_pred CCCCCCcEEEEeCCHhh---HHHHHHcCCcEEEEcC
Q 010820 447 GVDKPSEILFVTDVYQE---ATAAKAAGLEVVISIR 479 (500)
Q Consensus 447 ~v~~p~~~l~VGDs~~D---i~aA~~aG~~~i~v~~ 479 (500)
+ .+=++.|+.+.++ ++-|+..|+.+|..++
T Consensus 127 ~---~~LiItvD~Gi~~~e~i~~a~~~gidvIVtDH 159 (575)
T PRK11070 127 G---AQLIVTVDNGISSHAGVAHAHALGIPVLVTDH 159 (575)
T ss_pred C---CCEEEEEcCCcCCHHHHHHHHHCCCCEEEECC
Confidence 3 3466778777654 5555999999999875
No 349
>PRK05718 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=21.01 E-value=5.6e+02 Score=23.81 Aligned_cols=84 Identities=13% Similarity=0.069 Sum_probs=49.5
Q ss_pred HHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCcccccccccccccccccCCCCHH-HHHHHHHHcCCCCCCcEEEEe-CC
Q 010820 383 EALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKYLSGFFDTAVGNKRETP-SYVEITNSLGVDKPSEILFVT-DV 460 (500)
Q Consensus 383 ~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~f~~~~d~~~~~KP~p~-~~~~~l~~l~v~~p~~~l~VG-Ds 460 (500)
++++.|.+.++ +.|+.+.+.+....+.+.+--+|+ ..++. ...+|... .+..+.+++ | + +.|| ++
T Consensus 7 ~~~~~l~~~~~-iaV~r~~~~~~a~~i~~al~~~Gi-----~~iEi-tl~~~~~~~~I~~l~~~~----p-~-~~IGAGT 73 (212)
T PRK05718 7 SIEEILRAGPV-VPVIVINKLEDAVPLAKALVAGGL-----PVLEV-TLRTPAALEAIRLIAKEV----P-E-ALIGAGT 73 (212)
T ss_pred HHHHHHHHCCE-EEEEEcCCHHHHHHHHHHHHHcCC-----CEEEE-ecCCccHHHHHHHHHHHC----C-C-CEEEEee
Confidence 56677777665 888888888888887766621121 12222 23445433 333443333 3 3 4454 55
Q ss_pred H---hhHHHHHHcCCcEEEEcC
Q 010820 461 Y---QEATAAKAAGLEVVISIR 479 (500)
Q Consensus 461 ~---~Di~aA~~aG~~~i~v~~ 479 (500)
. .+++.|.++|.+++....
T Consensus 74 Vl~~~~a~~a~~aGA~FivsP~ 95 (212)
T PRK05718 74 VLNPEQLAQAIEAGAQFIVSPG 95 (212)
T ss_pred ccCHHHHHHHHHcCCCEEECCC
Confidence 4 677778889999887753
No 350
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=20.77 E-value=1.4e+02 Score=30.31 Aligned_cols=35 Identities=20% Similarity=0.424 Sum_probs=27.0
Q ss_pred eeeeeeCCC---Cc----hhHHHHHHHHHhhCCCccEEEEccccc
Q 010820 173 VVPIIENTA---YE----NELTDSLAKAIDAYPKATAVLVRNHGI 210 (500)
Q Consensus 173 ~vp~~~~~~---~~----~~l~~~v~~~l~~~~~~~~vll~nHG~ 210 (500)
.||+++... +. .++++.|.+++++. -.+.+.|||+
T Consensus 51 ~iPvIDls~l~~~~~~~r~~~~~~l~~Ac~~~---GFF~l~nHGI 92 (362)
T PLN02393 51 NIPVIDLSSLFSDDARLRDATLRAISEACREW---GFFQVVNHGV 92 (362)
T ss_pred CCCeEECccccCCChHHHHHHHHHHHHHHHHC---cEEEEEeCCC
Confidence 499999743 12 46778888888875 7889999998
No 351
>cd01948 EAL EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.
Probab=20.67 E-value=5.1e+02 Score=23.66 Aligned_cols=90 Identities=12% Similarity=0.232 Sum_probs=50.5
Q ss_pred HHHHHHHHHhCCcEEEEEcCCcHHHHHHHHhccCccccccc--ccccc-cccc---cCCCCHHHHHHHHHHcCCCCCCcE
Q 010820 381 VPEALEKWHSLGTKVYIYSSGSRLAQRLIFGNSNYGDLRKY--LSGFF-DTAV---GNKRETPSYVEITNSLGVDKPSEI 454 (500)
Q Consensus 381 v~~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~~~~~l~~~--f~~~~-d~~~---~~KP~p~~~~~~l~~l~v~~p~~~ 454 (500)
+.+.++.|++.|+++++---+........+..+. .++ ++..+ .... ....--..+...++.+++ .+
T Consensus 134 ~~~~~~~l~~~G~~l~ld~~g~~~~~~~~l~~~~----~d~iKld~~~~~~~~~~~~~~~~l~~l~~~~~~~~~----~v 205 (240)
T cd01948 134 ALATLRRLRALGVRIALDDFGTGYSSLSYLKRLP----VDYLKIDRSFVRDIETDPEDRAIVRAIIALAHSLGL----KV 205 (240)
T ss_pred HHHHHHHHHHCCCeEEEeCCCCcHhhHHHHHhCC----CCEEEECHHHHHhHhcChhhHHHHHHHHHHHHHCCC----eE
Confidence 6789999999999999843222222223333331 122 33322 1111 111122233444445554 45
Q ss_pred EEEe-CCHhhHHHHHHcCCcEEEEc
Q 010820 455 LFVT-DVYQEATAAKAAGLEVVISI 478 (500)
Q Consensus 455 l~VG-Ds~~Di~aA~~aG~~~i~v~ 478 (500)
+.=| ++..+.+.+++.|+..+.-.
T Consensus 206 ia~gVe~~~~~~~~~~~gi~~~QG~ 230 (240)
T cd01948 206 VAEGVETEEQLELLRELGCDYVQGY 230 (240)
T ss_pred EEEecCCHHHHHHHHHcCCCeeeec
Confidence 5556 88899999999999876543
No 352
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=20.09 E-value=7.9e+02 Score=23.66 Aligned_cols=31 Identities=10% Similarity=-0.040 Sum_probs=18.0
Q ss_pred HHHHHHHhCCcEEEEEcCCcHHHHHHHHhcc
Q 010820 383 EALEKWHSLGTKVYIYSSGSRLAQRLIFGNS 413 (500)
Q Consensus 383 ~~L~~L~~~G~~l~v~Tn~~~~~~~~~l~~~ 413 (500)
.+-+.|++.|+.+..+++.........++..
T Consensus 22 ~LA~~l~~~g~~v~f~~~~~~~~~~~~i~~~ 52 (279)
T TIGR03590 22 TLARALHAQGAEVAFACKPLPGDLIDLLLSA 52 (279)
T ss_pred HHHHHHHHCCCEEEEEeCCCCHHHHHHHHHc
Confidence 4555666667777666666555544444444
Done!